Citrus Sinensis ID: 005825

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-----
Protein Sequence
MNGYSSMLQHLLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKSQFNQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEccccEEEEEEccccccccEEEEEEEcccccEEEEEcccccccccccEEEEEEEcccEEEEcccccEEEEEcccccccccEEEEEccccEEEEEcccccccccEEEEEccccccccccccEEEccccccccEEEEEcccccccccccEEEEEEcccccEEEEEEccEEEEEEccccccEEccccccccccEEEEEEEcccEEEEEEEEccccEEEEEEEcccccEEEEEEEcccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccEEccccccccccEEEEEccccccccccEEccccccHHHHHHHHHccccccccccccccccccEEEEcccccccccccccccccEEEEEcccccccccccEEEEEEEEHHHHHHHHHHHHHEEEHHHHHHHHHccccHHHcccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccEEEEEcccccEEEEEEccccccccHHHHHHHHHHHHHHcccccEEEEEEEccccEEEEEEEEcccccccEEEccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEccccccccccccccccccccccccccccccccccccccEEcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEccccEEEEEEEcccccccEEEEEEEEccccEEEEEEccccccccccEEEEEccccEEEEEEccccEEEEccccccccccEEEEEccccEEEEEcccccccccEEEEEccccccccccccEccccccccccEEEEEcccccccccccEEEEEccccccEEEEEcccEEEEEccccccEEEccccccccccEEEEEEEcccEEEEEEEEEcccEEEEEEEccccEEEEEEEEcccccEEEEEEccccccccHcccccccEEccccccccccccccccccccccccccccEEcccccccccccEEEEccccccccccEEEcccccHHHHHHHHHHcccEEEEEEEEcccccEEEEEEccHHHHHHcccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHccccccccccccccccccccccccccccccEcHHHHHHHHcccccccccccccccccEccEcccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccHHHcccHccccccHHHHHHHHHHHHHHHHHHHHccHcccccccccHHHEEEcccccEEEcccccccEcccccccccccEEccc
Coil and Loop (DISEMBL)
MNGYSSMLQHLLSLIFFLSMKVslaadtvtpasfirdgeklvsssqrfelgffspgksksrylGIWFRKVPDTVVWVanrdrpisdhnavltisnngklvllnqtngtiwstnasseaknpvaqlrddgnlvirdnssvnttenylwqsfdyptdtllQDMKMGWDLKNRRERYlsswrsdddpspgkftnrldihvlpkmctfngsvkytctgewtgdgfvsALSNTNFLYKQFLVENQDeisywyepynrpsimtlklspsgfvtrqlwnedsnewdelfsipddycgkygycganticgpdqkpmcqclegfrlksqfnqtgpikcershssecikgdqfikldnikapdfIEVSLNQSMNLQQCAAECLKnctckayansnvtegsgclmwfgelldasrpirnftgqsvylrqpasgpgnkkLLWIIVIVvppmvllpsvYIFCRqrrkckekenmETSQDLLAFdittrpnefseangdrrdkskdswlplFSLASVAAATENFSmecklgeggfgpvykgrllngEEVAVKRLssqsgqgleEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILeympnksldvflfdptkkrlLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNvlldrdmnpkisdfglarmfggdelqgntkrivgt
Flexible Loop (DISEMBL)
MNGYSSMLQHLLSLIFFLSMKVSLAADTVTPASFIrdgeklvsssqrfelgffspgksksrylGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWStnasseaknpvaqlrddgnlvirdnssvnttenylwqSFDYPTDTLLQDMKMGWDLKNRRERYLsswrsdddpspgkfTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKSQFNQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCkekenmetsqdllafdittrpnefseangdrrdkskdsWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLArmfggdelqgntkrivgt
Low Complexity Region (SEG)
MNGYSSMLQHLLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKSQFNQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPGNKKllwiivivvppmvllpSVYIFCRQRRKCKEKENMETSQDLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT
Disordered region (IsUnstruct)
******MLQHLLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWST****************GNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYL*************FTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKSQFNQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRK***************F***********************WLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVK**********EEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG**************
Disordered Region (DISOPRED)
***YSSMLQHLLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSE**NPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKSQFNQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDL***************************LPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT
Disordered Region (DISEMBL)
MNGYSSMLQHLLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERY***********PGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKSQFNQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRPNE***********SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT
Disordered Region (DISPRO)
*NGYSSMLQHLLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKSQFNQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKE********************************DSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNGYSSMLQHLLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKSQFNQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	675	2.2.26 [Sep-21-2011]
Q9S972	847	Receptor-like serine/thre	yes	no	0.942	0.750	0.431	1e-143
Q9ZT07	833	G-type lectin S-receptor-	no	no	0.949	0.769	0.414	1e-142
O81905	850	Receptor-like serine/thre	no	no	0.952	0.756	0.420	1e-142
O81832	783	G-type lectin S-receptor-	no	no	0.903	0.779	0.419	1e-141
O81906	849	G-type lectin S-receptor-	no	no	0.96	0.763	0.413	1e-138
Q39086	843	Receptor-like serine/thre	no	no	0.952	0.762	0.418	1e-137
Q9LPZ3	845	G-type lectin S-receptor-	no	no	0.945	0.755	0.419	1e-136
Q09092	857	Putative serine/threonine	N/A	no	0.970	0.764	0.406	1e-132
Q9SY89	842	Putative G-type lectin S-	no	no	0.974	0.781	0.401	1e-130
Q9SXB5	820	G-type lectin S-receptor-	no	no	0.946	0.779	0.395	1e-129

>sp|Q9S972|SD16_ARATH Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana GN=SD16 PE=1 SV=2

 Score =  509 bits (1312), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 289/670 (43%), Positives = 405/670 (60%), Gaps = 34/670 (5%)

Query: 28  TVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVP-DTVVWVANRDRPISD 86
           + T +  I   + ++S SQ FELGFF+P  S   YLGIW++ +P  T VWVANRD P+S 
Sbjct: 31  SATESLTISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKIIPIRTYVWVANRDNPLSS 90

Query: 87  HNAVLTISNNGKLVLLNQTNGTIWSTNASS-EAKNPVA-QLRDDGNLVIRDNSSVNTTEN 144
            N  L IS+N  LV+ +Q++  +WSTN +  + ++PVA +L D GN V+RD S  N    
Sbjct: 91  SNGTLKISDN-NLVIFDQSDRPVWSTNITGGDVRSPVAAELLDYGNFVLRD-SKNNKPSG 148

Query: 145 YLWQSFDYPTDTLLQDMKMGWDLKNRR-ERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCT 203
           +LWQSFD+PTDTLL DMKMGWD K+    R L SW++ DDPS G F+ +L     P+   
Sbjct: 149 FLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRTSGFPEFYI 208

Query: 204 FNGSVKYTCTGEWTGDGF--VSALSNTNFLYKQFLVENQDEISYWYEPYNRPSIMT-LKL 260
           +N       +G W G+ F  V  +   +++   F  EN  ++ Y Y   N+ +I + L L
Sbjct: 209 YNKESITYRSGPWLGNRFSSVPGMKPVDYIDNSF-TENNQQVVYSYR-VNKTNIYSILSL 266

Query: 261 SPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKSQ 320
           S +G + R  W E +  W +L+  P D C  Y  CG    C  +  P+C C++GF   ++
Sbjct: 267 SSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANTSPICNCIKGFEPMNE 326

Query: 321 FN--QTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTC 378
               +   + C R     C   D F++L  ++ PD  E S+++ + L++C   CLK C C
Sbjct: 327 QAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVDKGIGLKECEERCLKGCNC 386

Query: 379 KAYANSNVTEG-SGCLMWFGELLDASRPIRNFT--GQSVYLRQPASGPGNKKLLWIIVI- 434
            A+AN+++  G SGC++W G L D    IRN+   GQ +Y+R  A    +K++    +I 
Sbjct: 387 TAFANTDIRNGGSGCVIWSGGLFD----IRNYAKGGQDLYVRVAAGDLEDKRIKSKKIIG 442

Query: 435 --VVPPMVLLPSVYIFCRQRRKCKEKENMET-------SQDLLAFDITTRPNEFSEANGD 485
             +   ++LL S  IF   +RK K    ++T       SQD L  ++      ++     
Sbjct: 443 SSIGVSILLLLSFIIFHFWKRKQKRSITIQTPIVDLVRSQDSLMNELVKASRSYTS---- 498

Query: 486 RRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG 545
           + +K+    LPL    ++A AT NFS + KLG+GGFG VYKG LL+G+E+AVKRLS  S 
Sbjct: 499 KENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSS 558

Query: 546 QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLG 605
           QG +EF NE+ LIAKLQH NLVR+LGCC+++GEK+LI EY+ N SLD  LFD T+   L 
Sbjct: 559 QGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSNLN 618

Query: 606 WQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
           WQ R  II GIA+GLLYLH  SR RIIHRDLKASNVLLD++M PKISDFG+AR+FG +E 
Sbjct: 619 WQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMARIFGREET 678

Query: 666 QGNTKRIVGT 675
           + NT+R+VGT
Sbjct: 679 EANTRRVVGT 688

Involved in the regulation of cellular expansion and differentiation.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3

 Score =  507 bits (1306), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 280/675 (41%), Positives = 401/675 (59%), Gaps = 34/675 (5%)

Query: 24  LAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPD-TVVWVANRDR 82
           ++ DT+     +RDGE ++S+ +RF  GFFS G S+ RY+GIW+ ++   T+VWVANRD 
Sbjct: 17  ISVDTIMRRQSLRDGEVILSAGKRFAFGFFSLGDSELRYVGIWYAQISQQTIVWVANRDH 76

Query: 83  PISDHNAVLTISNNGKLVLLNQTNGT--IWSTNASSEAKNP--VAQLRDDGNLVIRDNSS 138
           PI+D + ++  SN G L +    N T  IWSTN S     P  VA L D GNLV+ D   
Sbjct: 77  PINDTSGMVKFSNRGNLSVYASDNETELIWSTNVSDSMLEPTLVATLSDLGNLVLFDP-- 134

Query: 139 VNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVL 198
              T    W+SFD+PTDT L  M++G+  K+  +R L+SW+S  DP  G    R++    
Sbjct: 135 --VTGRSFWESFDHPTDTFLPFMRLGFTRKDGLDRSLTSWKSHGDPGSGDLILRMERRGF 192

Query: 199 PKMCTFNGSVKYTCTGEWTGDGFVSALSN-TNFLYKQFLVENQDEISYWYEPYNRPSIMT 257
           P++  + G   +   G WTG  +         +++    V N+DE+S+ Y   +   I  
Sbjct: 193 PQLILYKGVTPWWRMGSWTGHRWSGVPEMPIGYIFNNSFVNNEDEVSFTYGVTDASVITR 252

Query: 258 LKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTIC-GPDQKPM-CQCLEGF 315
             ++ +G + R  W      W++ +S+P + C  Y +CG N  C  P  K   C CL GF
Sbjct: 253 TMVNETGTMHRFTWIARDKRWNDFWSVPKEQCDNYAHCGPNGYCDSPSSKTFECTCLPGF 312

Query: 316 RLK---SQFNQTGPIKC-ERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAE 371
             K     F +     C ++  +S C + D F+KL  +K PD  + S++ ++ L++C   
Sbjct: 313 EPKFPRHWFLRDSSGGCTKKKRASICSEKDGFVKLKRMKIPDTSDASVDMNITLKECKQR 372

Query: 372 CLKNCTCKAYANS--NVTEGS-GCLMWFGELLDASRPIRNFTGQSVYLRQPA-------- 420
           CLKNC+C AYA++      G+ GCL W G +LDA   +   +GQ  Y+R           
Sbjct: 373 CLKNCSCVAYASAYHESKRGAIGCLKWHGGMLDARTYLN--SGQDFYIRVDKEELARWNR 430

Query: 421 SGPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRPNEFS 480
           +G   K+ + +I+I +   V+L +V +FC  R + K   +  +S +         P +F 
Sbjct: 431 NGLSGKRRVLLILISLIAAVMLLTVILFCVVRERRKSNRHRSSSANFAPV-----PFDFD 485

Query: 481 EANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRL 540
           E+    +DK+++  LPLF L ++ AAT NFS + KLG GGFGPVYKG L N  E+AVKRL
Sbjct: 486 ESFRFEQDKARNRELPLFDLNTIVAATNNFSSQNKLGAGGFGPVYKGVLQNRMEIAVKRL 545

Query: 541 SSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTK 600
           S  SGQG+EEFKNE+ LI+KLQHRNLVRILGCC+E  EK+L+ EY+PNKSLD F+F   +
Sbjct: 546 SRNSGQGMEEFKNEVKLISKLQHRNLVRILGCCVELEEKMLVYEYLPNKSLDYFIFHEEQ 605

Query: 601 KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           +  L W  R+ I+ GIA+G+LYLH  SR RIIHRDLKASN+LLD +M PKISDFG+AR+F
Sbjct: 606 RAELDWPKRMEIVRGIARGILYLHQDSRLRIIHRDLKASNILLDSEMIPKISDFGMARIF 665

Query: 661 GGDELQGNTKRIVGT 675
           GG++++G T R+VGT
Sbjct: 666 GGNQMEGCTSRVVGT 680

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana GN=SD18 PE=1 SV=1

 Score =  506 bits (1304), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 284/676 (42%), Positives = 406/676 (60%), Gaps = 33/676 (4%)

Query: 23  SLAADTVTPAS--FIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPD-TVVWVAN 79
           S++A+T++ +    I     +VS    FELGFF PG     YLGIW++ +   T VWVAN
Sbjct: 26  SISANTLSASESLTISSNNTIVSPGNVFELGFFKPGLDSRWYLGIWYKAISKRTYVWVAN 85

Query: 80  RDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASS-EAKNP-VAQLRDDGNLVIRDNS 137
           RD P+S     L IS++  LV+L+Q++  +WSTN +  + ++P VA+L D+GN V+RD S
Sbjct: 86  RDTPLSSSIGTLKISDS-NLVVLDQSDTPVWSTNLTGGDVRSPLVAELLDNGNFVLRD-S 143

Query: 138 SVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHV 197
             +  +  LWQSFD+PTDTLL +MK+GWD K    R++ SW+S DDPS G F+ +L+   
Sbjct: 144 KNSAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFNRFIRSWKSPDDPSSGDFSFKLETEG 203

Query: 198 LPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQF-LVENQDEISYWYEPYNRPSIM 256
            P++  +N   +   +G W G  F        F Y  F    +++E++Y +         
Sbjct: 204 FPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYMVFNFTTSKEEVTYSFRITKSDVYS 263

Query: 257 TLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFR 316
            L +S SG + R  W E +  W++ +  P D C +Y  CG    C  +  P+C C++GF+
Sbjct: 264 RLSISSSGLLQRFTWIETAQNWNQFWYAPKDQCDEYKECGVYGYCDSNTSPVCNCIKGFK 323

Query: 317 LKSQFN---QTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECL 373
            ++      + G   C R     C  GD F++L  +K PD    S+++ + +++C  +CL
Sbjct: 324 PRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKKMKLPDTTTASVDRGIGVKECEQKCL 383

Query: 374 KNCTCKAYANSNVT-EGSGCLMWFGELLDASRPIRNFT--GQSVYLRQPASGPGNKKLLW 430
           ++C C A+AN+++   GSGC+ W GEL D    IRN+   GQ +Y+R  A+   +K+   
Sbjct: 384 RDCNCTAFANTDIRGSGSGCVTWTGELFD----IRNYAKGGQDLYVRLAATDLEDKRNRS 439

Query: 431 IIVI---VVPPMVLLPSVYIFCRQRRKCKEKENMET--------SQDLLAFDITTRPNEF 479
             +I   +   ++LL S  IF   +RK K    +ET        S+DLL  ++       
Sbjct: 440 AKIIGSSIGVSVLLLLSFIIFFLWKRKQKRSILIETPIVDHQLRSRDLLMNEVVIS---- 495

Query: 480 SEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKR 539
           S  +  R + + D  LPL     VA AT NFS   KLG+GGFG VYKG+LL+G+E+AVKR
Sbjct: 496 SRRHISRENNTDDLELPLMEFEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQEMAVKR 555

Query: 540 LSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPT 599
           LS  S QG +EFKNE+ LIA+LQH NLVR+L CC++ GEK+LI EY+ N SLD  LFD +
Sbjct: 556 LSKTSVQGTDEFKNEVKLIARLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLFDKS 615

Query: 600 KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
           +   L WQ R  II GIA+GLLYLH  SRFRIIHRDLKASN+LLD+ M PKISDFG+AR+
Sbjct: 616 RNSKLNWQMRFDIINGIARGLLYLHQDSRFRIIHRDLKASNILLDKYMTPKISDFGMARI 675

Query: 660 FGGDELQGNTKRIVGT 675
           FG DE + NT+++VGT
Sbjct: 676 FGRDETEANTRKVVGT 691

Involved in the regulation of cellular expansion and differentiation.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4

 Score =  504 bits (1297), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 285/679 (41%), Positives = 398/679 (58%), Gaps = 69/679 (10%)

Query: 10  HLLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRK 69
           HLL +  F ++ ++ A D +     ++DG+ +VS    FE+GFFSPG S++RYLGIW++K
Sbjct: 8   HLLIISLFSTILLAQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIWYKK 67

Query: 70  VP-DTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNA-----SSEAKNPVA 123
           +   TVVWVANRD P+ D +  L +S NG L L N  N  IWS+++      +  +NP+ 
Sbjct: 68  ISLQTVVWVANRDSPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQKASLRNPIV 127

Query: 124 QLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDD 183
           Q+ D GNLV+R++      ++Y+WQS DYP D  L  MK G +      R+L+SWR+ DD
Sbjct: 128 QILDTGNLVVRNSGD---DQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRAIDD 184

Query: 184 PSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALS-NTNFLYKQFLVENQDE 242
           PS G +TN++D + +P+      SV    TG W G  F    +   N +Y+   V  ++E
Sbjct: 185 PSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKPNPIYRYEYVFTEEE 244

Query: 243 ISYWYEPYNRPSIMT-LKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTIC 301
           + Y Y+  N PS++T ++L+P+G + R  W ++   W+   S   D C +Y  CG+   C
Sbjct: 245 VYYTYKLEN-PSVLTRMQLNPNGALQRYTWVDNLQSWNFYLSAMMDSCDQYTLCGSYGSC 303

Query: 302 GPDQKPMCQCLEGFRLKS-QFNQTGPIK--CERSHSSECIKG-DQFIKLDNIKAPDFIEV 357
             ++ P C+CL+GF  K+ Q    G     C R    +C KG D F+K+  +K PD    
Sbjct: 304 NINESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLPDTRTS 363

Query: 358 SLNQSMNLQQCAAECLKNCTCKAYANSNVTEGS-GCLMWFGELLDASRPIRNFTGQSVYL 416
             +++M+L +C   CL+NCTC AY+  ++ +G  GC++WFG+L+D      N  GQ +Y+
Sbjct: 364 WYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIRE--YNENGQDLYV 421

Query: 417 RQPASGPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRP 476
           R  +S                                                 +I T  
Sbjct: 422 RLASS-------------------------------------------------EIETLQ 432

Query: 477 NEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVA 536
            E S  +  R+ + +D  LP   L +V+ AT  FS   KLG+GGFGPVYKG L  G+EVA
Sbjct: 433 RESSRVSS-RKQEEEDLELPFLDLDTVSEATSGFSAGNKLGQGGFGPVYKGTLACGQEVA 491

Query: 537 VKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLF 596
           VKRLS  S QG+EEFKNE+ LIAKLQHRNLV+ILG C+++ E++LI EY PNKSLD F+F
Sbjct: 492 VKRLSRTSRQGVEEFKNEIKLIAKLQHRNLVKILGYCVDEEERMLIYEYQPNKSLDSFIF 551

Query: 597 DPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL 656
           D  ++R L W  R+ II+GIA+G+LYLH  SR RIIHRDLKASNVLLD DMN KISDFGL
Sbjct: 552 DKERRRELDWPKRVEIIKGIARGMLYLHEDSRLRIIHRDLKASNVLLDSDMNAKISDFGL 611

Query: 657 ARMFGGDELQGNTKRIVGT 675
           AR  GGDE + NT R+VGT
Sbjct: 612 ARTLGGDETEANTTRVVGT 630

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1

 Score =  493 bits (1268), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 291/703 (41%), Positives = 414/703 (58%), Gaps = 55/703 (7%)

Query: 10  HLLSLIFFLSMKVSLAADTVTPASFIRDG---EKLVSSSQRFELGFFSPGKSKSRYLGIW 66
           +L   ++F   + S+AA+T+     +RDG   + LVS  + FELGFFSPG S  R+LGIW
Sbjct: 10  YLSLFLYFFLYESSMAANTIRRGESLRDGINHKPLVSPQKTFELGFFSPGSSTHRFLGIW 69

Query: 67  FRKVPD-TVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEA---KNPV 122
           +  + D  VVWVANR  PISD + VL ISN+G LVLL+  N T+WS+N  S      N V
Sbjct: 70  YGNIEDKAVVWVANRATPISDQSGVLMISNDGNLVLLDGKNITVWSSNIESSTTNNNNRV 129

Query: 123 AQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDD 182
             + D GN V+ +      T+  +W+SF++PTDT L  M++  + +        SWRS+ 
Sbjct: 130 VSIHDTGNFVLSETD----TDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFVSWRSET 185

Query: 183 DPSPGKFTNRLDIHVLPKMCTFNGS-VKYTCTGEWTGDGFVSALSN----TNFLYKQFLV 237
           DPSPG ++  +D    P++  + G+  +   +G+W    F + + N    TN+LY   L 
Sbjct: 186 DPSPGNYSLGVDPSGAPEIVLWEGNKTRKWRSGQWNSAIF-TGIPNMSLLTNYLYGFKLS 244

Query: 238 ENQDE---ISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGY 294
              DE   + + Y P +   ++  K+  +G      WNE   +W +  S PD  C +Y  
Sbjct: 245 SPPDETGSVYFTYVPSDPSVLLRFKVLYNGTEEELRWNETLKKWTKFQSEPDSECDQYNR 304

Query: 295 CGANTICG-PDQKPMCQCLEGFRLKSQFN------QTGPIKCERSHSSECIKGDQFIKLD 347
           CG   IC       +C C+ G+   S  N      +  P+KCER+ S   +  D+F+ L 
Sbjct: 305 CGKFGICDMKGSNGICSCIHGYEQVSVGNWSRGCRRRTPLKCERNIS---VGEDEFLTLK 361

Query: 348 NIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASRPIR 407
           ++K PDF E+  +  ++ + C   CL+NC+C AY+   +  G GC++W  +L+D    ++
Sbjct: 362 SVKLPDF-EIPEHNLVDPEDCRERCLRNCSCNAYS---LVGGIGCMIWNQDLVD----LQ 413

Query: 408 NFT--GQSVYLRQPASGPG-NKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEK------ 458
            F   G S+++R   S  G N+K    +++ V   V+L  ++     R K K+       
Sbjct: 414 QFEAGGSSLHIRLADSEVGENRKTKIAVIVAVLVGVILIGIFALLLWRFKRKKDVSGAYC 473

Query: 459 -ENMETSQDLLAFDITTRPNEFSEANGD-----RRDKSKDSWLPLFSLASVAAATENFSM 512
            +N +TS  ++  D+T      S  +G             S LP+FSL ++A AT +F  
Sbjct: 474 GKNTDTS--VVVADLTKSKETTSAFSGSVDIMIEGKAVNTSELPVFSLNAIAIATNDFCK 531

Query: 513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
           E +LG GGFGPVYKG L +G E+AVKRLS +SGQG++EFKNE++LIAKLQHRNLVR+LGC
Sbjct: 532 ENELGRGGFGPVYKGVLEDGREIAVKRLSGKSGQGVDEFKNEIILIAKLQHRNLVRLLGC 591

Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
           C E  EK+L+ EYMPNKSLD FLFD TK+ L+ W+ R  IIEGIA+GLLYLH  SR RII
Sbjct: 592 CFEGEEKMLVYEYMPNKSLDFFLFDETKQALIDWKLRFSIIEGIARGLLYLHRDSRLRII 651

Query: 633 HRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           HRDLK SNVLLD +MNPKISDFG+AR+FGG++ + NT R+VGT
Sbjct: 652 HRDLKVSNVLLDAEMNPKISDFGMARIFGGNQNEANTVRVVGT 694

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana GN=SD17 PE=1 SV=1

 Score =  489 bits (1259), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 283/677 (41%), Positives = 402/677 (59%), Gaps = 34/677 (5%)

Query: 19  SMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVP-DTVVWV 77
           +  VS    + T +  I   + ++S SQ FELGFF+P  S   YLGIW++ +P  T VWV
Sbjct: 22  AFSVSPNTLSATESLTISSNKTIISPSQIFELGFFNPASSSRWYLGIWYKIIPIRTYVWV 81

Query: 78  ANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASS-EAKNPVA-QLRDDGNLVIRD 135
           ANRD P+S  N  L IS N  LV+ +Q++  +WSTN +  + ++PVA +L D+GN ++RD
Sbjct: 82  ANRDNPLSSSNGTLKISGNN-LVIFDQSDRPVWSTNITGGDVRSPVAAELLDNGNFLLRD 140

Query: 136 NSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDI 195
           +++       LWQSFD+PTDTLL +MK+GWD K    R L SW++ DDPS G+F+ +L+ 
Sbjct: 141 SNN-----RLLWQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGEFSTKLET 195

Query: 196 HVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQF-LVENQDEISYWYEPYNRPS 254
              P+    +       +G W G  F S        Y  +    +++E++Y Y       
Sbjct: 196 SEFPEFYICSKESILYRSGPWNGMRFSSVPGTIQVDYMVYNFTASKEEVTYSYRINKTNL 255

Query: 255 IMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEG 314
              L L+ +G + R  W E +  W +L+  P D C  Y  CG    C  +  P C C++G
Sbjct: 256 YSRLYLNSAGLLQRLTWFETTQSWKQLWYSPKDLCDNYKVCGNFGYCDSNSLPNCYCIKG 315

Query: 315 FRLKSQFN---QTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAE 371
           F+  ++     + G   C R     C   D F +L  +K PD     +++ + L+ C   
Sbjct: 316 FKPVNEQAWDLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDTTATIVDREIGLKVCKER 375

Query: 372 CLKNCTCKAYANSNVTEG-SGCLMWFGELLDASRPIRNFT--GQSVYLRQPASGPGNKKL 428
           CL++C C A+AN+++  G SGC++W  E+LD    +RN+   GQ +Y+R  A+   +K++
Sbjct: 376 CLEDCNCTAFANADIRNGGSGCVIWTREILD----MRNYAKGGQDLYVRLAAAELEDKRI 431

Query: 429 LWIIVI---VVPPMVLLPSVYIFCRQRRKCKEKENMET-------SQDLLAFDITTRPNE 478
               +I   +   ++LL S  IF   +RK K    ++T       SQD L  D+      
Sbjct: 432 KNEKIIGSSIGVSILLLLSFVIFHFWKRKQKRSITIQTPNVDQVRSQDSLINDVVVSRRG 491

Query: 479 FSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVK 538
           ++     +  KS+   LPL  L ++A AT NFS + KLG+GGFG VYKGRLL+G+E+AVK
Sbjct: 492 YTS----KEKKSEYLELPLLELEALATATNNFSNDNKLGQGGFGIVYKGRLLDGKEIAVK 547

Query: 539 RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP 598
           RLS  S QG +EF NE+ LIAKLQH NLVR+LGCC+++GEK+LI EY+ N SLD  LFD 
Sbjct: 548 RLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQ 607

Query: 599 TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           T+   L WQ R  II GIA+GLLYLH  SR RIIHRDLKASNVLLD++M PKISDFG+AR
Sbjct: 608 TRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKISDFGMAR 667

Query: 659 MFGGDELQGNTKRIVGT 675
           +FG +E + NT+R+VGT
Sbjct: 668 IFGREETEANTRRVVGT 684

Involved in the regulation of cellular expansion and differentiation. Mediates subcellular relocalization of PUB9 from nucleus to plasma membrane in a protein-phosphorylation-dependent manner. May be involved in the abscisic acid-mediated signaling pathway, at least during germination.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3

 Score =  485 bits (1249), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 284/677 (41%), Positives = 401/677 (59%), Gaps = 39/677 (5%)

Query: 27  DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPD-TVVWVANRDRPIS 85
           +T+  +  ++DG+ + S  +RF  GFFS G SK RY+GIW+ +V + T+VWVANRD PI+
Sbjct: 23  NTILRSQSLKDGDVIYSEGKRFAFGFFSLGNSKLRYVGIWYAQVSEQTIVWVANRDHPIN 82

Query: 86  DHNAVLTISNNGKLVLLNQTNGT--IWSTNASSEAKNP--VAQLRDDGNLVIRDNSSVNT 141
           D + ++  S  G L +    NGT  IWST+     + P  VA+L D GNLV+ D      
Sbjct: 83  DTSGLIKFSTRGNLCVYASGNGTEPIWSTDVIDMIQEPALVAKLSDLGNLVLLDP----V 138

Query: 142 TENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKM 201
           T    W+SF++PT+TLL  MK G+  ++  +R ++SWRS  DP  G  T R++    P+M
Sbjct: 139 TGKSFWESFNHPTNTLLPFMKFGFTRQSGVDRIMTSWRSPGDPGSGNITYRIERRGFPQM 198

Query: 202 CTFNGSVKYTCTGEWTGDGFVSALSNTN-FLYKQFLVENQDEISYWYEPYNRPSIMTLKL 260
             + G   +  TG WTG  +      TN F++    V N DE+S  Y   +      + L
Sbjct: 199 MMYKGLTLWWRTGSWTGQRWSGVPEMTNKFIFNISFVNNPDEVSITYGVLDASVTTRMVL 258

Query: 261 SPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPD--QKPMCQCLEGFRLK 318
           + +G + R  WN    +W   +S P+D C  Y +CG N  C     +K  C CL G+  K
Sbjct: 259 NETGTLQRFRWNGRDKKWIGFWSAPEDKCDIYNHCGFNGYCDSTSTEKFECSCLPGYEPK 318

Query: 319 SQ---FNQTGPIKCERSHSSECIKGDQ-FIKLDNIKAPDFIEVSLNQSMNLQQCAAECLK 374
           +    F +     C R  +     G + F KL  +K P+   V+++ ++ L++C   CLK
Sbjct: 319 TPRDWFLRDASDGCTRIKADSICNGKEGFAKLKRVKIPNTSAVNVDMNITLKECEQRCLK 378

Query: 375 NCTCKAYANS---NVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPAS---------G 422
           NC+C AYA++   +     GCL W G +LD    +   +GQ  YLR   S          
Sbjct: 379 NCSCVAYASAYHESQDGAKGCLTWHGNMLDTRTYLS--SGQDFYLRVDKSELARWNGNGA 436

Query: 423 PGNKKLLWIIV-IVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLA---FDITTRPNE 478
            G K+L+ I++ ++   M+LL S + + R+RR+  +   +  +    A   FD+     E
Sbjct: 437 SGKKRLVLILISLIAVVMLLLISFHCYLRKRRQRTQSNRLRKAPSSFAPSSFDL-----E 491

Query: 479 FSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVK 538
            S    +  DKS+   LPLF L+++A AT NF+ + KLG GGFGPVYKG L NG E+AVK
Sbjct: 492 DSFILEELEDKSRSRELPLFELSTIATATNNFAFQNKLGAGGFGPVYKGVLQNGMEIAVK 551

Query: 539 RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP 598
           RLS  SGQG+EEFKNE+ LI+KLQHRNLVRILGCC+E  EK+L+ EY+PNKSLD F+F  
Sbjct: 552 RLSKSSGQGMEEFKNEVKLISKLQHRNLVRILGCCVEFEEKMLVYEYLPNKSLDYFIFHE 611

Query: 599 TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            ++  L W  R+GII GI +G+LYLH  SR RIIHRDLKASNVLLD +M PKI+DFGLAR
Sbjct: 612 EQRAELDWPKRMGIIRGIGRGILYLHQDSRLRIIHRDLKASNVLLDNEMIPKIADFGLAR 671

Query: 659 MFGGDELQGNTKRIVGT 675
           +FGG++++G+T R+VGT
Sbjct: 672 IFGGNQIEGSTNRVVGT 688

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q09092|SRK6_BRAOE Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=2

 Score =  472 bits (1214), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 283/696 (40%), Positives = 409/696 (58%), Gaps = 41/696 (5%)

Query: 5   SSMLQHLLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSR-YL 63
           S +L  ++ ++   ++ + +   + T +  I   + LVS    FE+GFF   ++ SR YL
Sbjct: 14  SFLLVFVVMILIHPALSIYINTLSSTESLTISSNKTLVSPGSIFEVGFF---RTNSRWYL 70

Query: 64  GIWFRKVPD-TVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNAS--SEAKN 120
           G+W++KV D T VWVANRD P+S+    L IS N  LVLL+ +N  +W TN +  +E   
Sbjct: 71  GMWYKKVSDRTYVWVANRDNPLSNAIGTLKISGNN-LVLLDHSNKPVWWTNLTRGNERSP 129

Query: 121 PVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRS 180
            VA+L  +GN V+RD+S+ + +E YLWQSFDYPTDTLL +MK+G++LK    R+L+SWRS
Sbjct: 130 VVAELLANGNFVMRDSSNNDASE-YLWQSFDYPTDTLLPEMKLGYNLKTGLNRFLTSWRS 188

Query: 181 DDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQF-LVEN 239
            DDPS G F+ +L+   LP+      +     +G W G  F     +    Y  +  +EN
Sbjct: 189 SDDPSSGNFSYKLETQSLPEFYLSRENFPMHRSGPWNGIRFSGIPEDQKLSYMVYNFIEN 248

Query: 240 QDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIP-DDYCGKYGYCGAN 298
            +E++Y +   N      L L   G+  R  W      W+  +S P D  C  Y  CG  
Sbjct: 249 NEEVAYTFRMTNNSFYSRLTLISEGYFQRLTWYPSIRIWNRFWSSPVDPQCDTYIMCGPY 308

Query: 299 TICGPDQKPMCQCLEGF--RLKSQFNQ-TGPIKCERSHSSECIKGDQFIKLDNIKAPDFI 355
             C  +  P+C C++GF  R   Q++Q      C R     C  GD F ++  +K P+  
Sbjct: 309 AYCDVNTSPVCNCIQGFNPRNIQQWDQRVWAGGCIRRTQLSC-SGDGFTRMKKMKLPETT 367

Query: 356 EVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEG-SGCLMWFGELLDASRPIRNFT---- 410
             ++++S+ +++C   C+ +C C A+AN+++  G SGC++W   L D    IRN+     
Sbjct: 368 MATVDRSIGVKECKKRCISDCNCTAFANADIRNGGSGCVIWTERLED----IRNYATDAI 423

Query: 411 -GQSVYLRQPASGPGNKKLLW--IIVIVVPPMVLLPSVYIFCRQRRKCKEKE-------N 460
            GQ +Y+R  A+    K+     II + V   VLL  + +FC  +RK K  +       N
Sbjct: 424 DGQDLYVRLAAADIAKKRNASGKIISLTVGVSVLLLLI-MFCLWKRKQKRAKASAISIAN 482

Query: 461 METSQDLLAFD-ITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEG 519
            + +Q+L   + + +   EFS   G+ + +  +  LPL  + +V  ATENFS   KLG+G
Sbjct: 483 TQRNQNLPMNEMVLSSKREFS---GEYKFEELE--LPLIEMETVVKATENFSSCNKLGQG 537

Query: 520 GFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK 579
           GFG VYKGRLL+G+E+AVKRLS  S QG +EF NE+ LIA+LQH NLV++LGCCIE  EK
Sbjct: 538 GFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEK 597

Query: 580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKAS 639
           +LI EY+ N SLD +LF  T++  L W  R  I  G+A+GLLYLH  SRFRIIHRDLK S
Sbjct: 598 MLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVS 657

Query: 640 NVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           N+LLD++M PKISDFG+AR+F  DE + NT ++VGT
Sbjct: 658 NILLDKNMIPKISDFGMARIFERDETEANTMKVVGT 693

Involved in sporophytic self-incompatibility system (the inability of flowering plants to achieve self-fertilization), probably acting in combination with S-locus-specific glycoproteins. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Brassica oleracea var. acephala (taxid: 3713)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SY89|Y1661_ARATH Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana GN=At1g61610 PE=2 SV=1

 Score =  465 bits (1196), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 284/707 (40%), Positives = 402/707 (56%), Gaps = 49/707 (6%)

Query: 1   MNGYSSMLQHLLSLIFF--LSMKVSLA-ADTVTPASFIRDGEKLVSSSQRFELGFFSPGK 57
           M G++  L  + +L+ F  L   VS + +++ T    IR+G+ L+S  + FELGFF+P  
Sbjct: 1   MAGFNRNLTLVTTLLIFHQLCSNVSCSTSNSFTRNHTIREGDSLISEDESFELGFFTPKN 60

Query: 58  SKSRYLGIWFRKV-PDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASS 116
           S  RY+GIW++ + P TVVWVANR++P+ DH   L I+++G LV++N  N TIWSTN   
Sbjct: 61  STLRYVGIWYKNIEPQTVVWVANREKPLLDHKGALKIADDGNLVIVNGQNETIWSTNVEP 120

Query: 117 EAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLS 176
           E+ N VA L   G+LV+  +S       + W+SF+ PTDT L  M++  +      R   
Sbjct: 121 ESNNTVAVLFKTGDLVLCSDSD---RRKWYWESFNNPTDTFLPGMRVRVNPSLGENRAFI 177

Query: 177 SWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTG---DGFVSALSNTNFLYK 233
            W+S+ DPSPGK++  +D     ++  + G  +   +G W      G    L  TN++Y 
Sbjct: 178 PWKSESDPSPGKYSMGIDPVGALEIVIWEGEKRKWRSGPWNSAIFTGIPDMLRFTNYIYG 237

Query: 234 QFLVENQDE---ISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCG 290
             L    D    + + Y   +    +   + P G   +  WN+D   W+ L   P   C 
Sbjct: 238 FKLSSPPDRDGSVYFTYVASDSSDFLRFWIRPDGVEEQFRWNKDIRNWNLLQWKPSTECE 297

Query: 291 KYGYCGANTICGPDQK---PMCQCLEGFR--LKSQFNQTG---------PIKCERSHSSE 336
           KY  CG  ++C   ++     C C++GF    + Q+N            P+ C +S  + 
Sbjct: 298 KYNRCGNYSVCDDSKEFDSGKCSCIDGFEPVHQDQWNNRDFSGGCQRRVPLNCNQSLVAG 357

Query: 337 CIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWF 396
             + D F  L  IK PDF  V L+   N + C   C ++C+CKAYA   +  G GC++W 
Sbjct: 358 --QEDGFTVLKGIKVPDFGSVVLHN--NSETCKDVCARDCSCKAYA---LVVGIGCMIWT 410

Query: 397 GELLDASRPIRNFTGQSVYLRQPASGPGNKK---LLWIIVI-VVPPMVLLPSVYIFCRQR 452
            +L+D     R   G S+ +R   S  G  K    LWIIV  V+   +L   ++I  + +
Sbjct: 411 RDLIDMEHFERG--GNSINIRLAGSKLGGGKENSTLWIIVFSVIGAFLLGLCIWILWKFK 468

Query: 453 RKCK----EKENMETSQDLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATE 508
           +  K    +K+++  S  +   D ++ P       GD+ D      LP+FS  SVA+AT 
Sbjct: 469 KSLKAFLWKKKDITVSDIIENRDYSSSP--IKVLVGDQVDTPD---LPIFSFDSVASATG 523

Query: 509 NFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           +F+ E KLG+GGFG VYKG    G E+AVKRLS +S QGLEEFKNE+LLIAKLQHRNLVR
Sbjct: 524 DFAEENKLGQGGFGTVYKGNFSEGREIAVKRLSGKSKQGLEEFKNEILLIAKLQHRNLVR 583

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
           +LGCCIE  EK+L+ EYMPNKSLD FLFD +K+  L W+ R  +I GIA+GLLYLH  SR
Sbjct: 584 LLGCCIEDNEKMLLYEYMPNKSLDRFLFDESKQGSLDWRKRWEVIGGIARGLLYLHRDSR 643

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            +IIHRDLKASN+LLD +MNPKISDFG+AR+F   +   NT R+VGT
Sbjct: 644 LKIIHRDLKASNILLDTEMNPKISDFGMARIFNYRQDHANTIRVVGT 690

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB5|Y1135_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11305 OS=Arabidopsis thaliana GN=At1g11305 PE=2 SV=1

 Score =  463 bits (1192), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 276/698 (39%), Positives = 399/698 (57%), Gaps = 59/698 (8%)

Query: 6   SMLQHLLSL-IFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLG 64
           S + H+LSL  FFLS  VSLA +    +  + D E +VSS + F  GFFSP  S +RY G
Sbjct: 8   SPIVHVLSLSCFFLS--VSLAHERALFSGTLNDSETIVSSFRTFRFGFFSPVNSTNRYAG 65

Query: 65  IWFRKVP-DTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAK--NP 121
           IW+  +P  TV+WVAN+D PI+D + V++IS +G LV+ +     +WSTN S+ A   + 
Sbjct: 66  IWYNSIPVQTVIWVANKDTPINDSSGVISISEDGNLVVTDGQRRVLWSTNVSTRASANST 125

Query: 122 VAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERY-LSSWRS 180
           VA+L + GNLV++D +    T+ YLW+SF YPTD+ L +M +G + +       ++SW +
Sbjct: 126 VAELLESGNLVLKDAN----TDAYLWESFKYPTDSWLPNMLVGTNARTGGGNITITSWTN 181

Query: 181 DDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTC---TGEWTGDGF--VSALSNTNFLYKQF 235
             DPSPG +T  L +   P++  FN +        +G W G  F  +  +    FLY+ F
Sbjct: 182 PSDPSPGSYTAALVLAPYPELFIFNNNDNNATVWRSGPWNGLMFNGLPDVYPGLFLYR-F 240

Query: 236 LVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYC 295
            V +    S      N  ++  L L   GF  R+ W+E    W     +P   C  Y  C
Sbjct: 241 KVNDDTNGSATMSYANDSTLRHLYLDYRGFAIRRDWSEARRNWTLGSQVPATECDIYSRC 300

Query: 296 GANTICGPDQKPMCQCLEGFRLKSQF-----NQTG------PIKCERSHSSECIKGDQFI 344
           G  T C P + P C C++GFR ++       N +G      P++CER ++      D+F+
Sbjct: 301 GQYTTCNPRKNPHCSCIKGFRPRNLIEWNNGNWSGGCIRKLPLQCERQNNKG--SADRFL 358

Query: 345 KLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASR 404
           KL  +K PDF   S     +  +C   CL++C+C A+A+     G GC++W   L+D+  
Sbjct: 359 KLQRMKMPDFARRS---EASEPECFMTCLQSCSCIAFAHG---LGYGCMIWNRSLVDSQV 412

Query: 405 PIRNFTGQSVYLRQPASGPGNKKLLWI-------IVIVVPPMVLLPSVYIFCRQRRKCKE 457
              +    S+ L        +++ + I       I +V   ++L   + +  R ++K  +
Sbjct: 413 LSASGMDLSIRLAHSEFKTQDRRPILIGTSLAGGIFVVATCVLLARRIVMKKRAKKKGTD 472

Query: 458 KENMETSQDLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLG 517
            E +    + LA              G  R+K K+  LPLF    +A AT+NFS+  KLG
Sbjct: 473 AEQIFKRVEALA--------------GGSREKLKE--LPLFEFQVLATATDNFSLSNKLG 516

Query: 518 EGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG 577
           +GGFGPVYKG LL G+E+AVKRLS  SGQGLEE   E+++I+KLQHRNLV++ GCCI   
Sbjct: 517 QGGFGPVYKGMLLEGQEIAVKRLSQASGQGLEELVTEVVVISKLQHRNLVKLFGCCIAGE 576

Query: 578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLK 637
           E++L+ E+MP KSLD ++FDP + +LL W  R  II GI +GLLYLH  SR RIIHRDLK
Sbjct: 577 ERMLVYEFMPKKSLDFYIFDPREAKLLDWNTRFEIINGICRGLLYLHRDSRLRIIHRDLK 636

Query: 638 ASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           ASN+LLD ++ PKISDFGLAR+F G+E + NT+R+VGT
Sbjct: 637 ASNILLDENLIPKISDFGLARIFPGNEDEANTRRVVGT 674

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	675
224115098	802	predicted protein [Populus trichocarpa]	0.930	0.783	0.483	1e-173
359493711	1081	PREDICTED: G-type lectin S-receptor-like	0.921	0.575	0.481	1e-166
224122858	831	predicted protein [Populus trichocarpa]	0.964	0.783	0.466	1e-165
224126243	836	predicted protein [Populus trichocarpa]	0.946	0.764	0.470	1e-163
359493723	867	PREDICTED: G-type lectin S-receptor-like	0.952	0.741	0.467	1e-162
147816068	819	hypothetical protein VITISV_030742 [Viti	0.952	0.785	0.467	1e-162
224124250	820	predicted protein [Populus trichocarpa]	0.927	0.763	0.475	1e-161
224122958	812	predicted protein [Populus trichocarpa]	0.934	0.777	0.451	1e-160
224115136	843	predicted protein [Populus trichocarpa]	0.96	0.768	0.463	1e-159
224076591	834	predicted protein [Populus trichocarpa]	0.952	0.770	0.457	1e-159

>gi|224115098|ref|XP_002316939.1| predicted protein [Populus trichocarpa] gi|222860004|gb|EEE97551.1| predicted protein [Populus trichocarpa]

 Score =  613 bits (1582), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 328/679 (48%), Positives = 430/679 (63%), Gaps = 51/679 (7%)

Query: 11  LLSLIFFLSMK-VSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRK 69
             S +F  S+  +S +AD +TP   ++DG+ L+S SQ FELGFFSPG SK RY+GIW++K
Sbjct: 9   FFSTLFIQSLHFLSFSADIITPDLPVKDGQTLISVSQSFELGFFSPGTSKYRYVGIWYKK 68

Query: 70  VPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDG 129
            P+TVVWVANR+ P++DH  VLTI N G LVLL+Q    IWS+N+SS    PVAQL D G
Sbjct: 69  SPETVVWVANRNNPLTDHFGVLTIDNRGNLVLLDQIKNIIWSSNSSSIIAGPVAQLLDSG 128

Query: 130 NLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKF 189
           NLV+RDN S   TE+Y WQSFD P+DTLL  MK+GW+LK  +ERYL +WRS  DPSPG F
Sbjct: 129 NLVVRDNGSSRNTESYRWQSFDQPSDTLLPGMKLGWNLKTGQERYLITWRSISDPSPGDF 188

Query: 190 TNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQDEISYWYEP 249
           T RLDIH LP++    GSVK   +G W G  F       N +++  LV N+DEI Y Y  
Sbjct: 189 TYRLDIHGLPQLFIVVGSVKKVRSGPWNGIFFGGTPKVHNSVFEPILVRNEDEIYYTYRL 248

Query: 250 YNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMC 309
            N      L L+ SG V R +    ++ W  ++S+P D C  YG CGAN IC     P+C
Sbjct: 249 LNNSVCSRLTLNQSGAVERLVMYGQNSGWTTIYSVPVDTCENYGQCGANGICRTRTSPIC 308

Query: 310 QCLEGFR------LKSQFNQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSM 363
           +CL+GF+      L  Q N  G  KCE   + +C  G+ F+KL  +K PD +E  LN+SM
Sbjct: 309 ECLKGFKSIPEEELDIQ-NFYGSRKCETRLTLDCQSGEGFLKLPGVKLPDLLEFRLNESM 367

Query: 364 NLQQCAAECLKNCTCKAYANSNVT---EGSGCLMWFGELLDASRPIRNFTGQSVYLRQPA 420
           NL++C AEC KNC+C A+A +N++   +GSGCLMWFG L+D      +  GQ +++R PA
Sbjct: 368 NLKECEAECFKNCSCSAFATTNLSGGGDGSGCLMWFGNLIDIREQSGSTIGQDIHIRVPA 427

Query: 421 S----GPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRP 476
           S       +K+   +   +V  M  L  +++    RR    KE ME              
Sbjct: 428 SELEMARSSKRKKMLKTALVASMSALLGIFVSGMDRR----KEGMEA------------- 470

Query: 477 NEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVA 536
                              PLF L ++A AT NF+ +  +G GGFG VYKG+LL G+E+A
Sbjct: 471 -------------------PLFDLDTIATATNNFAPDSIIGAGGFGSVYKGKLLTGQEIA 511

Query: 537 VKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLF 596
           VK+LS  SGQG+EEF+NE++LIAKLQHRNLV +LG CI + E++LI EYMPNKSLD F+F
Sbjct: 512 VKKLSMNSGQGVEEFRNEVVLIAKLQHRNLVGLLGSCIHREERMLIYEYMPNKSLDYFIF 571

Query: 597 DPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL 656
           D  +  LLGW+ R  II GIA+GLLYLH  S+ +I+HRDLK SNVLLD ++ PKISDFGL
Sbjct: 572 DHERSALLGWKERFVIILGIARGLLYLHQDSKLQIVHRDLKPSNVLLDSNLIPKISDFGL 631

Query: 657 ARMFGGDELQGNTKRIVGT 675
           AR+ G D  +  T+R++GT
Sbjct: 632 ARISGDDGKETKTRRVIGT 650

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493711|ref|XP_002281022.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera]

 Score =  592 bits (1526), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 318/661 (48%), Positives = 409/661 (61%), Gaps = 39/661 (5%)

Query: 26  ADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPIS 85
           AD++     I D E LVSS Q FELGFFSPG SK+RYLGIW++  P T VWVANR+ PI+
Sbjct: 296 ADSIRMDQSISDSETLVSSGQSFELGFFSPGSSKNRYLGIWYKNTPQTAVWVANRNNPIA 355

Query: 86  DHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENY 145
           D   VLTI NNG LVLLNQ+   IWS N S   +NPVAQL + GNLV+RD S+  T+++Y
Sbjct: 356 DSYGVLTIINNGALVLLNQSKSVIWSPNLSRVPENPVAQLLETGNLVLRDGSN-ETSKSY 414

Query: 146 LWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFN 205
           +WQSFD P+DT+L  MK+GW+LK   +R L+SW+S DDPS G F+   DI+VLP +    
Sbjct: 415 IWQSFDDPSDTMLPGMKVGWNLKTGLQRKLTSWKSSDDPSLGDFSYGFDINVLPYLVLGV 474

Query: 206 GSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLSPSGF 265
           GS K   +G W G  F       N +YK   V N DE+   YE  N   I  L L+ SGF
Sbjct: 475 GSSKIVRSGPWNGLEFNGVYVLDNSVYKAVFVANNDEVYALYESNNNKIISRLTLNHSGF 534

Query: 266 VTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKSQ----- 320
           + R L  + S+ WDEL+SIP + C  YG+CGAN IC   +  +C+CL GF  KSQ     
Sbjct: 535 LQRLLLKKGSSVWDELYSIPSELCENYGHCGANGICRIGKLQICECLTGFTPKSQEEWDM 594

Query: 321 FNQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKA 380
           FN +    C R    +C   + F+K+  +K PD I+  +   ++L++C   CL NC+C A
Sbjct: 595 FNTSS--GCTRRMPLDCQIEEGFVKVTGVKLPDLIDFHVIMGVSLRECKVSCLNNCSCTA 652

Query: 381 YANSNVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPG------NKKLLWIIVI 434
           YA +N     GCLMW G+L+D          + +Y+R   S  G       KKL+ I+VI
Sbjct: 653 YAYTNPNGSGGCLMWSGDLIDIRELTSEKHAEDIYIRMHTSELGLNTNQKKKKLVIILVI 712

Query: 435 VVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRPNEFSEANGDRRDKSKDSW 494
                +L   +  + R  +    K  M T                     D+  K ++  
Sbjct: 713 STFSGILTLGLSFWFRFWK----KRTMGT---------------------DQESKKENLE 747

Query: 495 LPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNE 554
           LPLF L ++A AT NFS   K+G GGFG VYKG L  G  VAVKRLS  S QG++EFKNE
Sbjct: 748 LPLFDLPTIATATNNFSNTNKIGAGGFGSVYKGNLPEGVAVAVKRLSKNSAQGVQEFKNE 807

Query: 555 MLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE 614
            +LIAKLQH+NLVR+LGCCI+  E+IL+ EYMPNKSLD F+FD  ++ LL W  R  I+ 
Sbjct: 808 AVLIAKLQHKNLVRLLGCCIQGEERILLYEYMPNKSLDYFIFDQNRRALLAWDKRCEIVM 867

Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVG 674
           GIA+GLLYLH  SRF+IIHRDLK SN+LLD ++NPKISDFGLAR+FG +E++  TKRIVG
Sbjct: 868 GIARGLLYLHQDSRFQIIHRDLKTSNILLDDNLNPKISDFGLARIFGENEMETRTKRIVG 927

Query: 675 T 675
           T
Sbjct: 928 T 928

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122858|ref|XP_002330381.1| predicted protein [Populus trichocarpa] gi|222871766|gb|EEF08897.1| predicted protein [Populus trichocarpa]

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 316/678 (46%), Positives = 426/678 (62%), Gaps = 27/678 (3%)

Query: 11  LLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKV 70
           LLS++FFLS+  S A +++     + DG+ LVSS   FELGFFSPG S++RY+GIW++K+
Sbjct: 16  LLSIVFFLSIP-STAIESINATQSLEDGDTLVSSEGHFELGFFSPGNSRNRYMGIWYKKI 74

Query: 71  PD-TVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDG 129
              TVVWVANR+ P++D + +L   ++G L  +N TNGTIWS+N S  A NPVAQL D G
Sbjct: 75  SSFTVVWVANRNTPLNDSSGMLKFVDHGNLAFINSTNGTIWSSNISRAAINPVAQLLDTG 134

Query: 130 NLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKF 189
           NLV+R  +  N  EN+LWQSFDYP D+ L  MK G        RYL+SW+S  DPS GK+
Sbjct: 135 NLVVRAEND-NDPENFLWQSFDYPGDSFLPGMKYGISFVTGLNRYLTSWKSPSDPSTGKY 193

Query: 190 TNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALS-NTNFLYKQFLVENQDEISYWYE 248
           TN+LD + LP+     GSV    +G W G  F   ++   N +Y    V NQ+EI Y Y+
Sbjct: 194 TNKLDPNGLPQYFLSQGSVDQFRSGPWNGLRFSGMINLKPNPIYTFEFVFNQEEIYYKYQ 253

Query: 249 PYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPM 308
             N   +  + LSP G + R  W + + +W    +   D C ++  CGA+ +C  +  P 
Sbjct: 254 IANSSVLSRMVLSPDGVLQRFTWIDRTQDWTLYLTANMDNCDRFALCGAHGVCNINNSPA 313

Query: 309 CQCLEGFRLKSQFNQTGP---IKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNL 365
           C CL+ F  KS    T       C R    +C  G+ FIK   IK PD  +   N+++NL
Sbjct: 314 CDCLKEFEPKSLEEWTAADWSQGCVRKAPLDCSNGEGFIKYTGIKVPDTRKSWYNKTINL 373

Query: 366 QQCAAECLKNCTCKAYANSNVTEG-SGCLMWFGELLDASRPIRNFTGQSVYLR------- 417
           ++C   CLKNC+C AYAN +V +G SGC++WFG+L+D  +   N  GQ +Y+R       
Sbjct: 374 EECEEVCLKNCSCTAYANLDVRDGGSGCVLWFGDLIDIRQ--YNENGQDIYIRIAASVID 431

Query: 418 QPASGPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRPN 477
           +P    G K++  I++ V      L ++ +F R  RK K+++           ++ T P 
Sbjct: 432 KPVKSRGKKRVRIIVIPVSLVAFSLLALCLFLRFLRKNKQQQLTREG------NVVTNP- 484

Query: 478 EFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAV 537
              E +  +  +++D  LPLF LA++  AT  FS+  KLG+GGFGPVYKG L +G+E+AV
Sbjct: 485 ---EQDRTKESRNEDLELPLFDLATLTDATNCFSINNKLGQGGFGPVYKGILQDGQEIAV 541

Query: 538 KRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD 597
           KRLS +S QG+ EF+NE++ IAKLQHRNLV++LGCCIE  E++LI EYMPNKSLD F+FD
Sbjct: 542 KRLSKRSRQGINEFRNEVVCIAKLQHRNLVKLLGCCIELEERMLIYEYMPNKSLDSFIFD 601

Query: 598 PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             +  LL W  R  II GIA+GLLYLH  SR RIIHRDLKASN+LLD +MNPKISDFG+A
Sbjct: 602 KRRNMLLDWTKRFPIINGIARGLLYLHQDSRLRIIHRDLKASNILLDYEMNPKISDFGMA 661

Query: 658 RMFGGDELQGNTKRIVGT 675
           R FGGDE   NT RIVGT
Sbjct: 662 RSFGGDETSANTSRIVGT 679

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126243|ref|XP_002319790.1| predicted protein [Populus trichocarpa] gi|222858166|gb|EEE95713.1| predicted protein [Populus trichocarpa]

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 319/678 (47%), Positives = 431/678 (63%), Gaps = 39/678 (5%)

Query: 25  AADTVTPASFIRDG--EKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVP-DTVVWVANRD 81
            A+T+T +  IRDG    LVS    FELGFFSPG S++RY+GIW++ +P  TVVWVANR+
Sbjct: 18  TANTLTLSQSIRDGGTRTLVSKDGSFELGFFSPGSSRNRYVGIWYKNIPVRTVVWVANRN 77

Query: 82  RPISDHNAVLTISNNGKLVLLNQTNGTI-WSTNASSEAKNPVAQLRDDGNLVIRDNSSVN 140
            PI+D +  L + N G LVL++  N T+ WS+N+   A++ + +L D GNLV+RD   VN
Sbjct: 78  NPINDSSGFLMLDNTGNLVLVSNNNSTVVWSSNSKKAAQSAMGELLDSGNLVLRDEKDVN 137

Query: 141 TTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPK 200
           +  +YLWQSFDYP+DT+L  MK+GWDL+   +R LS+W+S DDPS G FT    +   P+
Sbjct: 138 SG-SYLWQSFDYPSDTMLPGMKLGWDLRIGLDRRLSAWKSPDDPSSGDFTWGTQLQSNPE 196

Query: 201 MCTFNGSVKYTCTGEWTGDGFV--SALSNTNFLYKQFLVENQDEISYWYEPYNRPSIMTL 258
           +  + GS KY  +G W G GF   +AL      Y  F V+N +E+ Y Y   N+  I  L
Sbjct: 197 LVIWKGSEKYFRSGPWNGIGFSGEAALRINPVFYFDF-VDNGEEVYYTYNLKNKSLITRL 255

Query: 259 KLS-PSGFV-TRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFR 316
            ++  +GF+  R  WNE S  W+    +P DYC  Y  CGA   C   Q P+C+CLE F 
Sbjct: 256 VMNQTTGFLRQRYTWNEISQTWELYAYVPRDYCDNYNLCGAYGNCIISQSPVCECLEKFT 315

Query: 317 LKS--QFNQTGPIK-CERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECL 373
            KS   +N     + C R+   +C KGD F+K   +K PD     +N++MNL++C ++CL
Sbjct: 316 PKSPESWNSMNWSQGCVRNKPLDCQKGDGFVKYVGLKLPDATNSWVNKTMNLKECRSKCL 375

Query: 374 KNCTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFT--GQSVYLRQPASGPG------N 425
           +NC+C AY  +++ E SGC +WFG+L+D    IR F   GQ +Y+R  AS          
Sbjct: 376 QNCSCMAYTATDIKERSGCAIWFGDLID----IRQFPDGGQEIYIRMNASESSECLSLIK 431

Query: 426 KKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRPNEFSEANGD 485
            ++   + I V   +LL + YIF ++  K K   +      LL + +    +  SE  G 
Sbjct: 432 MEMGIALSIFVACGMLLVAYYIF-KRTEKLKAHYSF-----LLVYHVCDSHSLLSEKTGG 485

Query: 486 RRDKS--------KDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAV 537
            R+++        +D  LPLF   ++A AT  FS+  K+GEGGFGPVYKG L +G+E+AV
Sbjct: 486 NREENDQIDSGPMEDMELPLFQFTTIAKATNGFSLNNKIGEGGFGPVYKGTLEDGQEIAV 545

Query: 538 KRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD 597
           K LS  SGQGL EFKNE++LI KLQHRNLV++LGCCI+  EKIL+ EYMPN+SLD F+FD
Sbjct: 546 KTLSRSSGQGLNEFKNEVILITKLQHRNLVKLLGCCIQGEEKILVYEYMPNRSLDSFIFD 605

Query: 598 PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
            T+ +LL W  R  II GIA+GLLYLH  SR RI+HRDLKASNVLLD+DMNPKISDFGLA
Sbjct: 606 QTRGKLLDWSKRFSIICGIARGLLYLHQDSRLRIVHRDLKASNVLLDKDMNPKISDFGLA 665

Query: 658 RMFGGDELQGNTKRIVGT 675
           RM GGD+ +GNT R++GT
Sbjct: 666 RMVGGDQTEGNTTRVIGT 683

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493723|ref|XP_002280706.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Vitis vinifera]

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 321/687 (46%), Positives = 425/687 (61%), Gaps = 44/687 (6%)

Query: 11  LLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRK- 69
           + + +F L +++S+  DT+T    I D E + S+   FELGFFSP  SK RYLGI ++K 
Sbjct: 10  IFTYVFSL-LRISIGVDTITVNQLITDAETITSAGGSFELGFFSPANSKHRYLGIRYKKE 68

Query: 70  VPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDG 129
           +   VVWVANR+ P++D + VL +++ G LV+L+  N T+WS+ +S  A+NP AQL D G
Sbjct: 69  LNRAVVWVANRENPLNDSSGVLKVTSQGILVVLDGANKTLWSSTSSRPAQNPNAQLLDSG 128

Query: 130 NLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKF 189
           NLV+++ +  N  EN+LWQSFDYP +TLL  MK+GW+     +RYLSSW+S DDPS G F
Sbjct: 129 NLVMKNGNDGNP-ENFLWQSFDYPCNTLLPGMKLGWNRVTGLDRYLSSWKSADDPSIGTF 187

Query: 190 TNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNT-NFLYKQFLVENQDEISYWYE 248
           T  +D    P++   N SV    +G W G  F      T N +Y    V N+ EI + Y 
Sbjct: 188 TYGIDPSGSPQIFVRNVSVVTFRSGPWNGIRFSGYPHFTPNPVYTYDFVLNEKEIYFIYY 247

Query: 249 PYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPM 308
             N   +  L L+P G+  R  W ++  +W +  S+ +D C  Y  CGAN IC  DQ P 
Sbjct: 248 LVNSSLLTRLVLTPDGYAQRFTWIDEKGQWVKYSSVQNDDCDNYALCGANGICKIDQSPK 307

Query: 309 CQCLEGFRLKSQFN---QTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNL 365
           C+C++GFR + Q N         C RS   +C KGD+F+K   +K PD      N+SMNL
Sbjct: 308 CECMKGFRPRFQSNWDMADWSDGCVRSTPLDCQKGDRFVKFSGVKLPDTRTSWFNESMNL 367

Query: 366 QQCAAECLKNCTCKAYANSNVT-EGSGCLMWFGELLDASRPIRNFT--GQSVYLRQPAS- 421
           ++CA+ CL+NC+C AY NSN++ EGSGCL+WFG L D    IR F   GQ  Y+R  AS 
Sbjct: 368 KECASLCLRNCSCTAYVNSNISGEGSGCLLWFGNLTD----IREFAENGQEFYVRMSASE 423

Query: 422 ----------GPGNKKLLWIIVIVVPPMVLLPSV---YIFCRQRRKCKEKENMETSQDLL 468
                         +K + +I I +  +VLL  V   Y+  + +++ K K  ME + D  
Sbjct: 424 SDAFSSTNISSKKKQKQVIVISISITGIVLLILVLTWYMLKKMKQQLKRKGYMEHNSD-- 481

Query: 469 AFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGR 528
                          G+  +  +   LPLF LA++  AT NFS + KLGEGGFGPVYKG 
Sbjct: 482 --------------GGETSEGQEHLELPLFELATLLNATNNFSSDNKLGEGGFGPVYKGI 527

Query: 529 LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN 588
           L +GEE+AVKRLS  S QGL+EFKNE+  IAKLQHRNLV++LGCCI   EK+LI EY+PN
Sbjct: 528 LEDGEEIAVKRLSKTSRQGLKEFKNEVESIAKLQHRNLVKLLGCCICGREKMLIYEYLPN 587

Query: 589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN 648
           KSLD+F+FD  +  +L W  R  II GIA+GLLYLH  SR RIIHRDLKA NVLLD DMN
Sbjct: 588 KSLDLFIFDQMRGIVLDWPKRFLIINGIARGLLYLHQDSRLRIIHRDLKAENVLLDNDMN 647

Query: 649 PKISDFGLARMFGGDELQGNTKRIVGT 675
           PKISDFG+AR FGG+EL  +T R+ GT
Sbjct: 648 PKISDFGIARSFGGNELGASTTRVAGT 674

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147816068|emb|CAN61538.1| hypothetical protein VITISV_030742 [Vitis vinifera]

 Score =  578 bits (1491), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 321/687 (46%), Positives = 425/687 (61%), Gaps = 44/687 (6%)

Query: 11  LLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRK- 69
           + + +F L +++S+  DT+T    I D E + S+   FELGFFSP  SK RYLGI ++K 
Sbjct: 10  IFTYVFSL-LRISIGVDTITVNQLITDAETITSAGGSFELGFFSPANSKHRYLGIRYKKE 68

Query: 70  VPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDG 129
           +   VVWVANR+ P++D + VL +++ G LV+L+  N T+WS+ +S  A+NP AQL D G
Sbjct: 69  LNRAVVWVANRENPLNDSSGVLKVTSQGILVVLDGANKTLWSSTSSRPAQNPNAQLLDSG 128

Query: 130 NLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKF 189
           NLV+++ +  N  EN+LWQSFDYP +TLL  MK+GW+     +RYLSSW+S DDPS G F
Sbjct: 129 NLVMKNGNDGNP-ENFLWQSFDYPCNTLLPGMKLGWNRVTGLDRYLSSWKSADDPSIGTF 187

Query: 190 TNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNT-NFLYKQFLVENQDEISYWYE 248
           T  +D    P++   N SV    +G W G  F      T N +Y    V N+ EI + Y 
Sbjct: 188 TYGIDPSGSPQIFVRNVSVVTFRSGPWNGIRFSGYPHFTPNPVYTYDFVLNEKEIYFIYY 247

Query: 249 PYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPM 308
             N   +  L L+P G+  R  W ++  +W +  S+ +D C  Y  CGAN IC  DQ P 
Sbjct: 248 LVNSSLLTRLVLTPDGYAQRFTWIDEKGQWVKYSSVQNDDCDNYALCGANGICKIDQSPK 307

Query: 309 CQCLEGFRLKSQFN---QTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNL 365
           C+C++GFR + Q N         C RS   +C KGD+F+K   +K PD      N+SMNL
Sbjct: 308 CECMKGFRPRFQSNWDMADWSDGCVRSTPLDCQKGDRFVKFSGVKLPDTRTSWFNESMNL 367

Query: 366 QQCAAECLKNCTCKAYANSNVT-EGSGCLMWFGELLDASRPIRNFT--GQSVYLRQPAS- 421
           ++CA+ CL+NC+C AY NSN++ EGSGCL+WFG L D    IR F   GQ  Y+R  AS 
Sbjct: 368 KECASLCLRNCSCTAYVNSNISGEGSGCLLWFGNLTD----IREFAENGQEFYVRMSASE 423

Query: 422 ----------GPGNKKLLWIIVIVVPPMVLLPSV---YIFCRQRRKCKEKENMETSQDLL 468
                         +K + +I I +  +VLL  V   Y+  + +++ K K  ME + D  
Sbjct: 424 SDAFSSTNISSKKKQKQVIVISISITGIVLLILVLTWYMLKKMKQQLKRKGYMEHNSD-- 481

Query: 469 AFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGR 528
                          G+  +  +   LPLF LA++  AT NFS + KLGEGGFGPVYKG 
Sbjct: 482 --------------GGETSEGQEHLELPLFELATLLNATNNFSSDNKLGEGGFGPVYKGI 527

Query: 529 LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN 588
           L +GEE+AVKRLS  S QGL+EFKNE+  IAKLQHRNLV++LGCCI   EK+LI EY+PN
Sbjct: 528 LEDGEEIAVKRLSKTSRQGLKEFKNEVESIAKLQHRNLVKLLGCCICGREKMLIYEYLPN 587

Query: 589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN 648
           KSLD+F+FD  +  +L W  R  II GIA+GLLYLH  SR RIIHRDLKA NVLLD DMN
Sbjct: 588 KSLDLFIFDQMRGIVLDWPKRFLIINGIARGLLYLHQDSRLRIIHRDLKAENVLLDNDMN 647

Query: 649 PKISDFGLARMFGGDELQGNTKRIVGT 675
           PKISDFG+AR FGG+EL  +T R+ GT
Sbjct: 648 PKISDFGIARSFGGNELXASTTRVAGT 674

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224124250|ref|XP_002319283.1| predicted protein [Populus trichocarpa] gi|222857659|gb|EEE95206.1| predicted protein [Populus trichocarpa]

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 318/669 (47%), Positives = 418/669 (62%), Gaps = 43/669 (6%)

Query: 25  AADTVTPASFIRDG--EKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVP-DTVVWVANRD 81
            A+T+T +  IRDG    LVS    FELGFFSPG S++RY+GIW++ +P  TVVWVANR+
Sbjct: 24  TANTLTLSQSIRDGGTRTLVSKDGSFELGFFSPGSSRNRYVGIWYKNIPVRTVVWVANRN 83

Query: 82  RPISDHNAVLTISNNGKLVLLNQTNGTI-WSTNASSEAKNPVAQLRDDGNLVIRDNSSVN 140
            PI+D +  L + N G  VL++  N T+ WS+N+   A++ + +L+D GNLV+RD    N
Sbjct: 84  NPINDSSGFLMLDNTGNFVLVSNNNSTVVWSSNSKKAAQSAMGELQDSGNLVLRDEKDDN 143

Query: 141 TTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPK 200
           +   YLWQSFDYP+DTLL  MK+GWDL+   +R LS+W+S DDPS G FT    +   P+
Sbjct: 144 SGI-YLWQSFDYPSDTLLPGMKLGWDLRIGLDRRLSAWKSPDDPSSGDFTWGTQLQSNPE 202

Query: 201 MCTFNGSVKYTCTGEWTGDGFVSALS-NTNFLYKQFLVENQDEISYWYEPYNRPSIMTLK 259
           +  + GS KY  +G W G GF   L+   N ++    V++ +E+ Y Y   N+  I  + 
Sbjct: 203 LVMWKGSKKYYRSGPWNGIGFSGGLALRINPVFYFDFVDDGEEVYYTYNLKNKSLITRIV 262

Query: 260 LSPSG-FVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLK 318
           ++ +  F  R  WNE +  W    ++P DYC  Y  CGA   C   Q P+CQCLE F  +
Sbjct: 263 MNQTTYFRQRYTWNEINQTWVLYATVPRDYCDTYNLCGAYGNCIMSQSPVCQCLEKFTPR 322

Query: 319 S--QFNQTGPIK-CERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKN 375
           S   +N     K C R+   +C KGD F+K   +K PD     +N++MNL++C ++CL+N
Sbjct: 323 SPESWNSMDWSKGCVRNKPLDCQKGDGFVKYVGLKLPDATNSWVNKTMNLKECRSKCLQN 382

Query: 376 CTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFT--GQSVYLRQPASGPGNKKLLWI-- 431
           C+C AY  +N+ E SGC +WFG+L+D    IR F+  GQ +Y+R  AS    K    I  
Sbjct: 383 CSCMAYTATNIKERSGCAVWFGDLID----IRQFSAAGQEIYIRLNASESRAKAASKIKM 438

Query: 432 -----IVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRPNEFSEANGDR 486
                + I V   +LL + YIF   +RK K         D     I + P E        
Sbjct: 439 TVGSALSIFVACGILLVAYYIF---KRKAKHIGGNREEND----QIDSGPKE-------- 483

Query: 487 RDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ 546
                D  LPLF   ++A AT  FS   KLGEGGFGPVYKG L +G+E+A K LS  SGQ
Sbjct: 484 -----DLELPLFQFTTIAKATNGFSFNNKLGEGGFGPVYKGTLEDGQEIAAKTLSRSSGQ 538

Query: 547 GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGW 606
           GL EFKNE++LI KLQHRNLV++LGCCI+  EKIL+ EYMPNKSLD F+FD T+ +LL W
Sbjct: 539 GLNEFKNEVILITKLQHRNLVKLLGCCIQGEEKILVYEYMPNKSLDSFIFDQTRGKLLDW 598

Query: 607 QARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
             R  II GIA+GLLYLH  SR RI+HRDLKASNVLLD+DMNPKISDFGLARMFGGD+ +
Sbjct: 599 SKRFSIICGIARGLLYLHQDSRLRIVHRDLKASNVLLDKDMNPKISDFGLARMFGGDQTE 658

Query: 667 GNTKRIVGT 675
           GNT R+VGT
Sbjct: 659 GNTTRVVGT 667

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122958|ref|XP_002330406.1| predicted protein [Populus trichocarpa] gi|222871791|gb|EEF08922.1| predicted protein [Populus trichocarpa]

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 306/678 (45%), Positives = 412/678 (60%), Gaps = 47/678 (6%)

Query: 15  IFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTV 74
           +FF  +K+S A D +     +RDGE LVS+   FELGFF+P  S SRYLG+W++K P TV
Sbjct: 12  LFFSILKISSALDAMNTTQSLRDGETLVSTGGSFELGFFTPAGSTSRYLGLWYKKSPQTV 71

Query: 75  VWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIR 134
           VWVANR  PIS+    L +++ G LVLLN TN  +WS+N S+  +NPVAQL D GNLV+R
Sbjct: 72  VWVANRGIPISNKFGTLNVTSQGILVLLNGTNNIVWSSNTSTTVQNPVAQLLDSGNLVVR 131

Query: 135 DNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLD 194
           D +  N  +N+LWQSFDYP DTLL  MK+G +L      +LSSW+  ++P+PG+FT  +D
Sbjct: 132 DGND-NKADNFLWQSFDYPCDTLLPGMKLGSNLVTGLNSFLSSWKGKENPAPGQFTLGID 190

Query: 195 IHVLPKMCTFNGSVKYTCTGEWTGDGFVSALS-NTNFLYKQFLVENQDEISYWYEPYNRP 253
           +   P++     +      G W G  F        + +Y    V N++E+ + +E  N  
Sbjct: 191 VQGYPQLILRKETRIMYRVGSWNGQYFTGFPELKPDPIYTFEFVFNRNEVYFKFELQNSS 250

Query: 254 SIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLE 313
               L ++PSG V    W+  +N+W    +   D C  Y  CGAN  C  +  P+C CL+
Sbjct: 251 VFSRLTVTPSGLVQLFTWSHQTNDWYVFATAVVDRCENYALCGANARCDSNSSPVCDCLD 310

Query: 314 GFRLKSQF-----NQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQC 368
           GF  KS       N TG   C R    +C   D F     +K PD      + S +L +C
Sbjct: 311 GFIHKSPTEWNSQNWTG--GCIRRTPLDCTDKDGFQSYTGVKLPDTSSSWYDDSFSLVEC 368

Query: 369 AAECLKNCTCKAYANSNVT-EGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPG--- 424
              C++NC+C AYAN +    GSGCL WFG+L+D  R      GQ +Y+R  AS  G   
Sbjct: 369 EGLCIQNCSCFAYANLDFRGRGSGCLRWFGDLIDTRRLAEG--GQDIYIRLAASQSGVTG 426

Query: 425 ----NKKLLWIIV---IVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRPN 477
                KK    ++   +++   +L+  + +FC +RRK ++  N E               
Sbjct: 427 EKKRKKKTHAGVIGGAVILGSSILILGI-VFCIRRRKHRKNGNFE--------------- 470

Query: 478 EFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAV 537
                  DR+++  +  LP+  L ++  AT+NFS   KLGEGGFG VYKG L+ G+E+AV
Sbjct: 471 -------DRKEEEME--LPMLDLTTIEHATDNFSSSKKLGEGGFGAVYKGELIEGQEIAV 521

Query: 538 KRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD 597
           KRLS  SGQGL EFKNE+LLIAKLQHRNLV++LGCCI + EK+LI EYMPN+SLD F+FD
Sbjct: 522 KRLSKSSGQGLNEFKNEVLLIAKLQHRNLVKLLGCCIHEDEKMLIYEYMPNRSLDSFIFD 581

Query: 598 PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
           PT+++ L W  R  II+GIA+GLLYLH  SR RIIHRD+KASN+LLD ++NPKISDFGLA
Sbjct: 582 PTRRKFLDWSKRTHIIDGIARGLLYLHQDSRLRIIHRDIKASNILLDNELNPKISDFGLA 641

Query: 658 RMFGGDELQGNTKRIVGT 675
           RMFGGD+ + NTKR+VGT
Sbjct: 642 RMFGGDQTEANTKRVVGT 659

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115136|ref|XP_002316951.1| predicted protein [Populus trichocarpa] gi|222860016|gb|EEE97563.1| predicted protein [Populus trichocarpa]

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 314/677 (46%), Positives = 426/677 (62%), Gaps = 29/677 (4%)

Query: 11  LLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKV 70
           +  L+ FL  K S A D+++P+ F+ DG+ LVS    FELGFFSPG SK  YLGIW++ +
Sbjct: 9   ITKLLLFL-FKFSTALDSISPSEFMIDGKTLVSEKGTFELGFFSPGISKKSYLGIWYKNI 67

Query: 71  P-DTVVWVANRDRPISDHNAVLTISNNGKLVLL-NQTNGTIWSTNASSEAKNPVAQLRDD 128
           P  T+VWVANR  PI+D + +L + N   +VLL N TN  +WS+N++ +A +P+ QL D 
Sbjct: 68  PVRTIVWVANRRNPINDSSGLLKVDNCSDIVLLSNNTNTVVWSSNSTKKASSPILQLLDS 127

Query: 129 GNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGK 188
           GNLV+RD +  +     LWQSFDYP DT+L  MK+GWDL+   +  LSSW+S DDPSPG 
Sbjct: 128 GNLVLRDKN--DGRSGLLWQSFDYPCDTMLPGMKIGWDLRAGFDWRLSSWKSSDDPSPGD 185

Query: 189 FTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALS-NTNFLYKQFLVENQDEISYWY 247
           FT  ++    P++  + GS K+  +G W G GF  +     N ++    V N  E+ Y +
Sbjct: 186 FTMGIERESNPEVVAWKGSKKHYRSGPWNGVGFSGSTEVKPNPVFYFTFVSNNIEVYYIF 245

Query: 248 EPYNRPSIMTLKLSPSGFVTRQ--LWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQ 305
              +  +++T  +       RQ   WNE++  W    S+P D+C  YG CGAN  C  + 
Sbjct: 246 NLKSESTVITRLVLNHTTSDRQCYTWNEETQTWVLQVSVPRDHCDNYGLCGANANCIFNA 305

Query: 306 KPMCQCLEGFRLKS--QFNQTGPIK-CERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQS 362
            P+CQCLE F+ KS  ++N+    + C R+   +C KGD FIK D +K PD     +N+ 
Sbjct: 306 IPVCQCLEKFKPKSPEEWNKMDWSQGCVRNKELDCQKGDGFIKFDGLKLPDATHSWVNKD 365

Query: 363 MNLQQCAAECLKNCTCKAYANSNVTEG-SGCLMWFGELLDASRPIRNFTGQSVYLRQPAS 421
           MNL++C A+CL NC+C AY+N ++  G SGC  WFG+L+D    +    GQ +Y+R  AS
Sbjct: 366 MNLKECKAKCLGNCSCMAYSNLDIRGGGSGCANWFGDLMDIR--LVPGGGQELYIRMHAS 423

Query: 422 GPGNKKL-----LWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRP 476
             G+++      +  I   V  ++L      +   + K K  EN  TS +    D     
Sbjct: 424 EIGDREAKANMKIAAIATAVVGLILGTLTISYHVSKEKAKSAEN--TSSERTENDWKNDT 481

Query: 477 NEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVA 536
           N     NG +++   D  LPLF+ +++A AT NFS+  KLGEGGFGPVY+G+L +G E+A
Sbjct: 482 N-----NGGQKE---DMELPLFAFSAIADATNNFSVNNKLGEGGFGPVYRGKLEDGLEIA 533

Query: 537 VKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLF 596
           VKRLS  SGQG  EFKNE++LI KLQHRNLV++LGCC ++ EK+LI EYMPN+SLD F+F
Sbjct: 534 VKRLSRCSGQGFSEFKNEVILINKLQHRNLVKLLGCCSQREEKMLIYEYMPNRSLDFFIF 593

Query: 597 DPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL 656
           D TK RLL W  R  II GIA+GLLYLH  SR RIIHRDLKASNVLLD  MNPKISDFGL
Sbjct: 594 DETKGRLLDWSRRFNIISGIARGLLYLHQDSRLRIIHRDLKASNVLLDDHMNPKISDFGL 653

Query: 657 ARMFGGDELQGNTKRIV 673
           ARMF  D+ +G+T R+ 
Sbjct: 654 ARMFVADQTEGDTSRVT 670

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224076591|ref|XP_002304966.1| predicted protein [Populus trichocarpa] gi|222847930|gb|EEE85477.1| predicted protein [Populus trichocarpa]

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 310/678 (45%), Positives = 429/678 (63%), Gaps = 35/678 (5%)

Query: 17  FLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVW 76
             S K + + DT+T    + +G+ L+S+SQ FELGFF+PG S++ Y+GIW++ +P T VW
Sbjct: 19  LFSSKFASSLDTLTATQSLINGQTLISTSQGFELGFFTPGNSRNWYVGIWYKNIPRTYVW 78

Query: 77  VANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDN 136
           VANRD+P+S+ +    I N   + L +     +WS+N ++ A+NPV QL D GNLV+++ 
Sbjct: 79  VANRDKPLSNSSGTFKIFNQ-SIALFDLAGKVVWSSNQTN-ARNPVMQLLDSGNLVLKEQ 136

Query: 137 SSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIH 196
             V+ +  +LWQSFDYPTDTLL DMK+GWDL    +RYLSSW+S +DP  G F+ +L+ H
Sbjct: 137 --VSESGQFLWQSFDYPTDTLLPDMKLGWDLNTGLDRYLSSWKSSEDPGTGDFSFKLEYH 194

Query: 197 VLPKMCTFNGSVKYTCTGEWTGDGF--VSALSNTNFLYKQFLVENQDEISYWYEPYNRPS 254
             P++  +  +     +G W G  F  V  +   ++L   F+ E QDE+ Y +    +  
Sbjct: 195 GFPEVFLWKDNEIEYRSGPWNGQRFSGVPEMKPVDYLSFNFITE-QDEVYYSFHIATKNL 253

Query: 255 IMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEG 314
              L ++ SG + R  W  ++ +W++ +  P D C  Y  CGA  IC  +  P+C+CL+G
Sbjct: 254 YSRLTVTSSGLLQRFAWIPETQQWNKFWYAPKDQCDNYKECGAYGICDSNASPVCKCLKG 313

Query: 315 FRLKSQFN---QTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAE 371
           F+ K+      + G   C R  + EC+K D+F+ + N+K P      +++SM+L+ C   
Sbjct: 314 FQPKNHQAWDLRDGSGGCVRKTNLECLK-DKFLHMKNMKLPQSTTSFVDRSMSLKNCELL 372

Query: 372 CLKNCTCKAYANSNVTEG-SGCLMWFGELLDASRPIRNFT--GQSVYLRQPAS--GPGNK 426
           C +NC+C AYANSN++ G SGC++W GEL D    +R +   GQ +Y+R  AS  G G  
Sbjct: 373 CSRNCSCTAYANSNISNGGSGCVIWTGELFD----LRQYPEGGQDLYVRLAASDIGDGGS 428

Query: 427 KLLWIIVIVVPPMVLLPSVYIFCRQRRK--------CKEKENMETSQDLLAFDITTRPNE 478
               II I V   +L+ S+  F   +RK         ++K   E SQDLL  ++     +
Sbjct: 429 ADTIIICIAVGIGILILSLTGFSIWKRKRLLSVCNGTQQKGPQERSQDLLLNEVVINKKD 488

Query: 479 FSEANGDRRDKSKDSW-LPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAV 537
           +S       +KS D   LPLF  +++AAAT NF  E KLGEGGFG V+KGRL+ G+EVAV
Sbjct: 489 YSG------EKSTDELELPLFDFSTIAAATGNFCDENKLGEGGFGCVHKGRLVEGQEVAV 542

Query: 538 KRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD 597
           KRLS +SGQG EEFKNE+ LIA+LQHRNLVR+LGCCIE  EKILI E+M N+SLD  LF+
Sbjct: 543 KRLSKKSGQGTEEFKNEVRLIARLQHRNLVRLLGCCIEMDEKILIYEFMENRSLDSVLFN 602

Query: 598 PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             K  LL WQ R  II G A+GLLYLH  SRFRIIHRDLKASN+LLD +  PKISDFG+A
Sbjct: 603 KAKSSLLNWQRRFNIICGTARGLLYLHQDSRFRIIHRDLKASNILLDGEWTPKISDFGMA 662

Query: 658 RMFGGDELQGNTKRIVGT 675
           R+FGGD+ Q NT+RIVGT
Sbjct: 663 RIFGGDQTQANTRRIVGT 680

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	675
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.601	0.518	0.374	2.1e-141
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.971	0.774	0.429	8.3e-138
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.958	0.767	0.422	5.4e-134
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.985	0.782	0.407	5.4e-134
TAIR|locus:2131694	815	AT4G27300 [Arabidopsis thalian	0.945	0.782	0.413	9.6e-128
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.92	0.731	0.422	1.3e-125
TAIR|locus:2200888	804	AT1G61500 [Arabidopsis thalian	0.268	0.225	0.662	1.7e-124
TAIR|locus:2200908	842	AT1G61610 [Arabidopsis thalian	0.977	0.783	0.4	5.8e-121
TAIR|locus:2197729	805	SD1-29 "S-domain-1 29" [Arabid	0.281	0.236	0.623	6.7e-119
TAIR|locus:2197704	831	AT1G61390 [Arabidopsis thalian	0.934	0.759	0.408	1.3e-116

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 766 (274.7 bits), Expect = 2.1e-141, Sum P(2) = 2.1e-141
 Identities = 159/425 (37%), Positives = 246/425 (57%)

Query:    10 HLLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRK 69
             HLL +  F ++ ++ A D +     ++DG+ +VS    FE+GFFSPG S++RYLGIW++K
Sbjct:     8 HLLIISLFSTILLAQATDILIANQTLKDGDTIVSQGGSFEVGFFSPGGSRNRYLGIWYKK 67

Query:    70 VP-DTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEA-----KNPVA 123
             +   TVVWVANRD P+ D +  L +S NG L L N  N  IWS+++S  +     +NP+ 
Sbjct:    68 ISLQTVVWVANRDSPLYDLSGTLKVSENGSLCLFNDRNHIIWSSSSSPSSQKASLRNPIV 127

Query:   124 QLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDD 183
             Q+ D GNLV+R++      ++Y+WQS DYP D  L  MK G +      R+L+SWR+ DD
Sbjct:   128 QILDTGNLVVRNSGD---DQDYIWQSLDYPGDMFLPGMKYGLNFVTGLNRFLTSWRAIDD 184

Query:   184 PSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALS-NTNFLYKQFLVENQDE 242
             PS G +TN++D + +P+      SV    TG W G  F    +   N +Y+   V  ++E
Sbjct:   185 PSTGNYTNKMDPNGVPQFFLKKNSVVVFRTGPWNGLRFTGMPNLKPNPIYRYEYVFTEEE 244

Query:   243 ISYWYEPYNRPSIMT-LKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTIC 301
             + Y Y+  N PS++T ++L+P+G + R  W ++   W+   S   D C +Y  CG+   C
Sbjct:   245 VYYTYKLEN-PSVLTRMQLNPNGALQRYTWVDNLQSWNFYLSAMMDSCDQYTLCGSYGSC 303

Query:   302 GPDQKPMCQCLEGFRLKS-QFNQTGPIK--CERSHSSECIKG-DQFIKLDNIKAPDFIEV 357
               ++ P C+CL+GF  K+ Q    G     C R    +C KG D F+K+  +K PD    
Sbjct:   304 NINESPACRCLKGFVAKTPQAWVAGDWSEGCVRRVKLDCGKGEDGFLKISKLKLPDTRTS 363

Query:   358 SLNQSMNLQQCAAECLKNCTCKAYANSNVTEGS-GCLMWFGELLDASRPIRNFTGQSVYL 416
               +++M+L +C   CL+NCTC AY+  ++ +G  GC++WFG+L+D      N  GQ +Y+
Sbjct:   364 WYDKNMDLNECKKVCLRNCTCSAYSPFDIRDGGKGCILWFGDLIDIRE--YNENGQDLYV 421

Query:   417 RQPAS 421
             R  +S
Sbjct:   422 RLASS 426

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1349 (479.9 bits), Expect = 8.3e-138, P = 8.3e-138
 Identities = 294/684 (42%), Positives = 408/684 (59%)

Query:    11 LLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKV 70
             L  +I FL+  V  +  + T +  I   + ++S SQ FELGFF+P  S   YLGIW++ +
Sbjct:    14 LFIIILFLAFSVYASNFSATESLTISSNKTIISPSQIFELGFFNPDSSSRWYLGIWYKII 73

Query:    71 P-DTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASS-EAKNPVA-QLRD 127
             P  T VWVANRD P+S  N  L IS+N  LV+ +Q++  +WSTN +  + ++PVA +L D
Sbjct:    74 PIRTYVWVANRDNPLSSSNGTLKISDNN-LVIFDQSDRPVWSTNITGGDVRSPVAAELLD 132

Query:   128 DGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRR-ERYLSSWRSDDDPSP 186
              GN V+RD+ + N    +LWQSFD+PTDTLL DMKMGWD K+    R L SW++ DDPS 
Sbjct:   133 YGNFVLRDSKN-NKPSGFLWQSFDFPTDTLLSDMKMGWDNKSGGFNRILRSWKTTDDPSS 191

Query:   187 GKFTNRLDIHVLPKMCTFNG-SVKYTCTGEWTGDGF--VSALSNTNFLYKQFLVENQDEI 243
             G F+ +L     P+   +N  S+ Y  +G W G+ F  V  +   +++   F  EN  ++
Sbjct:   192 GDFSTKLRTSGFPEFYIYNKESITYR-SGPWLGNRFSSVPGMKPVDYIDNSF-TENNQQV 249

Query:   244 SYWYEPYNRPSIMT-LKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICG 302
              Y Y   N+ +I + L LS +G + R  W E +  W +L+  P D C  Y  CG    C 
Sbjct:   250 VYSYR-VNKTNIYSILSLSSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCD 308

Query:   303 PDQKPMCQCLEGFR-LKSQFN-QTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLN 360
              +  P+C C++GF  +  Q   +   + C R     C   D F++L  ++ PD  E S++
Sbjct:   309 ANTSPICNCIKGFEPMNEQAALRDDSVGCVRKTKLSCDGRDGFVRLKKMRLPDTTETSVD 368

Query:   361 QSMNLQQCAAECLKNCTCKAYANSNVTEG-SGCLMWFGELLDASRPIRNFT--GQSVYLR 417
             + + L++C   CLK C C A+AN+++  G SGC++W G L D    IRN+   GQ +Y+R
Sbjct:   369 KGIGLKECEERCLKGCNCTAFANTDIRNGGSGCVIWSGGLFD----IRNYAKGGQDLYVR 424

Query:   418 QPASGPGNKKXXXXXXXXXXXXXXXX---SVYIFCRQRRKCKEKENMETSQDLLAFDITT 474
               A    +K+                   S  IF   +RK K    ++T    L     +
Sbjct:   425 VAAGDLEDKRIKSKKIIGSSIGVSILLLLSFIIFHFWKRKQKRSITIQTPIVDLVRSQDS 484

Query:   475 RPNEFSEANGDRRDK-SKDSWL--PLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLN 531
               NE  +A+     K +K  +L  PL    ++A AT NFS + KLG+GGFG VYKG LL+
Sbjct:   485 LMNELVKASRSYTSKENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLD 544

Query:   532 GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL 591
             G+E+AVKRLS  S QG +EF NE+ LIAKLQH NLVR+LGCC+++GEK+LI EY+ N SL
Sbjct:   545 GKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSL 604

Query:   592 DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI 651
             D  LFD T+   L WQ R  II GIA+GLLYLH  SR RIIHRDLKASNVLLD++M PKI
Sbjct:   605 DSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMTPKI 664

Query:   652 SDFGLARMFGGDELQGNTKRIVGT 675
             SDFG+AR+FG +E + NT+R+VGT
Sbjct:   665 SDFGMARIFGREETEANTRRVVGT 688

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1313 (467.3 bits), Expect = 5.4e-134, P = 5.4e-134
 Identities = 290/687 (42%), Positives = 409/687 (59%)

Query:    12 LSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVP 71
             L LI FL+  VS    + T +  I   + ++S SQ FELGFF+P  S   YLGIW++ +P
Sbjct:    15 LILILFLAFSVSPNTLSATESLTISSNKTIISPSQIFELGFFNPASSSRWYLGIWYKIIP 74

Query:    72 -DTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASS-EAKNPVA-QLRDD 128
               T VWVANRD P+S  N  L IS N  LV+ +Q++  +WSTN +  + ++PVA +L D+
Sbjct:    75 IRTYVWVANRDNPLSSSNGTLKISGNN-LVIFDQSDRPVWSTNITGGDVRSPVAAELLDN 133

Query:   129 GNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGK 188
             GN ++RD+++       LWQSFD+PTDTLL +MK+GWD K    R L SW++ DDPS G+
Sbjct:   134 GNFLLRDSNN-----RLLWQSFDFPTDTLLAEMKLGWDQKTGFNRILRSWKTTDDPSSGE 188

Query:   189 FTNRLDIHVLPK--MCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQF-LVENQDEISY 245
             F+ +L+    P+  +C+   S+ Y  +G W G  F S        Y  +    +++E++Y
Sbjct:   189 FSTKLETSEFPEFYICS-KESILYR-SGPWNGMRFSSVPGTIQVDYMVYNFTASKEEVTY 246

Query:   246 WYEPYNRPSIMT-LKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPD 304
              Y   N+ ++ + L L+ +G + R  W E +  W +L+  P D C  Y  CG    C  +
Sbjct:   247 SYR-INKTNLYSRLYLNSAGLLQRLTWFETTQSWKQLWYSPKDLCDNYKVCGNFGYCDSN 305

Query:   305 QKPMCQCLEGFR-LKSQF--NQTGPIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQ 361
               P C C++GF+ +  Q    + G   C R     C   D F +L  +K PD     +++
Sbjct:   306 SLPNCYCIKGFKPVNEQAWDLRDGSAGCMRKTRLSCDGRDGFTRLKRMKLPDTTATIVDR 365

Query:   362 SMNLQQCAAECLKNCTCKAYANSNVTEG-SGCLMWFGELLDASRPIRNFT--GQSVYLRQ 418
              + L+ C   CL++C C A+AN+++  G SGC++W  E+LD    +RN+   GQ +Y+R 
Sbjct:   366 EIGLKVCKERCLEDCNCTAFANADIRNGGSGCVIWTREILD----MRNYAKGGQDLYVRL 421

Query:   419 PASGPGNKKXXXXXXXXXXXXXXXX---SVYIFCRQRRKCKEKENMET-------SQDLL 468
              A+   +K+                   S  IF   +RK K    ++T       SQD L
Sbjct:   422 AAAELEDKRIKNEKIIGSSIGVSILLLLSFVIFHFWKRKQKRSITIQTPNVDQVRSQDSL 481

Query:   469 AFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGR 528
               D+      ++     +  KS+   LPL  L ++A AT NFS + KLG+GGFG VYKGR
Sbjct:   482 INDVVVSRRGYTS----KEKKSEYLELPLLELEALATATNNFSNDNKLGQGGFGIVYKGR 537

Query:   529 LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN 588
             LL+G+E+AVKRLS  S QG +EF NE+ LIAKLQH NLVR+LGCC+++GEK+LI EY+ N
Sbjct:   538 LLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLEN 597

Query:   589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN 648
              SLD  LFD T+   L WQ R  II GIA+GLLYLH  SR RIIHRDLKASNVLLD++M 
Sbjct:   598 LSLDSHLFDQTRSSNLNWQKRFDIINGIARGLLYLHQDSRCRIIHRDLKASNVLLDKNMT 657

Query:   649 PKISDFGLARMFGGDELQGNTKRIVGT 675
             PKISDFG+AR+FG +E + NT+R+VGT
Sbjct:   658 PKISDFGMARIFGREETEANTRRVVGT 684

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1313 (467.3 bits), Expect = 5.4e-134, P = 5.4e-134
 Identities = 286/701 (40%), Positives = 407/701 (58%)

Query:     1 MNGYSSMLQHLLSLIFFLSM---KVSLAADTVTPASF--IRDGEKLVSSSQRFELGFFSP 55
             M G  +         FFL +     S++A+T++ +    I     +VS    FELGFF P
Sbjct:     1 MRGLPNFYHSYTFFFFFLLILFPAYSISANTLSASESLTISSNNTIVSPGNVFELGFFKP 60

Query:    56 GKSKSRYLGIWFRKVPD-TVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNA 114
             G     YLGIW++ +   T VWVANRD P+S     L IS++  LV+L+Q++  +WSTN 
Sbjct:    61 GLDSRWYLGIWYKAISKRTYVWVANRDTPLSSSIGTLKISDSN-LVVLDQSDTPVWSTNL 119

Query:   115 SS-EAKNP-VAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRE 172
             +  + ++P VA+L D+GN V+RD+ + +  +  LWQSFD+PTDTLL +MK+GWD K    
Sbjct:   120 TGGDVRSPLVAELLDNGNFVLRDSKN-SAPDGVLWQSFDFPTDTLLPEMKLGWDAKTGFN 178

Query:   173 RYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLY 232
             R++ SW+S DDPS G F+ +L+    P++  +N   +   +G W G  F        F Y
Sbjct:   179 RFIRSWKSPDDPSSGDFSFKLETEGFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEY 238

Query:   233 KQF-LVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGK 291
               F    +++E++Y +          L +S SG + R  W E +  W++ +  P D C +
Sbjct:   239 MVFNFTTSKEEVTYSFRITKSDVYSRLSISSSGLLQRFTWIETAQNWNQFWYAPKDQCDE 298

Query:   292 YGYCGANTICGPDQKPMCQCLEGFRLKS-QF--NQTGPIKCERSHSSECIKGDQFIKLDN 348
             Y  CG    C  +  P+C C++GF+ ++ Q    + G   C R     C  GD F++L  
Sbjct:   299 YKECGVYGYCDSNTSPVCNCIKGFKPRNPQVWGLRDGSDGCVRKTLLSCGGGDGFVRLKK 358

Query:   349 IKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVT-EGSGCLMWFGELLDASRPIR 407
             +K PD    S+++ + +++C  +CL++C C A+AN+++   GSGC+ W GEL D    IR
Sbjct:   359 MKLPDTTTASVDRGIGVKECEQKCLRDCNCTAFANTDIRGSGSGCVTWTGELFD----IR 414

Query:   408 NFT--GQSVYLRQPASG---PGNKKXXXXXXXXXXXXXXXXSVYIFCRQRRKCKEKENME 462
             N+   GQ +Y+R  A+      N+                 S  IF   +RK K    +E
Sbjct:   415 NYAKGGQDLYVRLAATDLEDKRNRSAKIIGSSIGVSVLLLLSFIIFFLWKRKQKRSILIE 474

Query:   463 T--------SQDLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMEC 514
             T        S+DLL  ++       S  +  R + + D  LPL     VA AT NFS   
Sbjct:   475 TPIVDHQLRSRDLLMNEVVIS----SRRHISRENNTDDLELPLMEFEEVAMATNNFSNAN 530

Query:   515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
             KLG+GGFG VYKG+LL+G+E+AVKRLS  S QG +EFKNE+ LIA+LQH NLVR+L CC+
Sbjct:   531 KLGQGGFGIVYKGKLLDGQEMAVKRLSKTSVQGTDEFKNEVKLIARLQHINLVRLLACCV 590

Query:   575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
             + GEK+LI EY+ N SLD  LFD ++   L WQ R  II GIA+GLLYLH  SRFRIIHR
Sbjct:   591 DAGEKMLIYEYLENLSLDSHLFDKSRNSKLNWQMRFDIINGIARGLLYLHQDSRFRIIHR 650

Query:   635 DLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             DLKASN+LLD+ M PKISDFG+AR+FG DE + NT+++VGT
Sbjct:   651 DLKASNILLDKYMTPKISDFGMARIFGRDETEANTRKVVGT 691

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2131694 AT4G27300 [Arabidopsis thaliana (taxid:3702)]

 Score = 1254 (446.5 bits), Expect = 9.6e-128, P = 9.6e-128
 Identities = 286/692 (41%), Positives = 399/692 (57%)

Query:     8 LQHLLSL-IFFLSMKVSLAAD--TVTPASFIRDGEKLVSSSQRFELGFFSPGKSKS---R 61
             +  L SL +F +S  +S+A D   +TP  F++DG+ L S  Q F+LGFFS  + +    R
Sbjct:     4 IHSLFSLSLFLISSSLSVALDYNVITPKEFLKDGDTLSSPDQVFQLGFFSLDQEEQPQHR 63

Query:    62 YLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWS-----TNASS 116
             +LG+W+ + P  VVWVANR+ P+   +  L +S+ G L L +  +  +WS     T AS 
Sbjct:    64 FLGLWYME-PFAVVWVANRNNPLYGTSGFLNLSSLGDLQLFDGEHKALWSSSSSSTKASK 122

Query:   117 EAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLS 176
              A NP+ ++   GNL+  D       E  LWQSFDYP +T+L  MK+G + K + E  LS
Sbjct:   123 TANNPLLKISCSGNLISSDGE-----EAVLWQSFDYPMNTILAGMKLGKNFKTQMEWSLS 177

Query:   177 SWRSDDDPSPGKFTNRLDIHVLPKMCTF-NGSVKYTCT-GEWTGDGFVSA--LSNTNFLY 232
             SW++  DPSPG FT  LD   LP++    NG   Y+   G W G  F  A  +   N L+
Sbjct:   178 SWKTLKDPSPGDFTLSLDTRGLPQLILRKNGDSSYSYRLGSWNGLSFTGAPAMGRENSLF 237

Query:   233 KQFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKY 292
                   +  E++Y + P +R  +  L L+ +G + R + ++  N+W    + P+D C  Y
Sbjct:   238 DYKFTSSAQEVNYSWTPRHR-IVSRLVLNNTGKLHRFIQSKQ-NQWILANTAPEDECDYY 295

Query:   293 GYCGANTICGPDQK--PMCQCLEGFRLKS--QFN-QTGPIKCERSHSSECIKGDQFIKLD 347
               CGA  +CG + K  P C CL+GF+ KS  ++N   G   C     + C K D F+K  
Sbjct:   296 SICGAYAVCGINSKNTPSCSCLQGFKPKSGRKWNISRGAYGCVHEIPTNCEKKDAFVKFP 355

Query:   348 NIKAPD--FIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGS-GCLMWFGELLDASR 404
              +K PD  +        M L+ C  +C  NC+C AYAN+++ EG  GCL+WFG+L+D  R
Sbjct:   356 GLKLPDTSWSWYDAKNEMTLEDCKIKCSSNCSCTAYANTDIREGGKGCLLWFGDLVDM-R 414

Query:   405 PIRNFTGQSVYLRQPASGPGNK-KXXXXXXXXXXXXXXXXSVYIFCRQRRKCKEKENMET 463
                +F GQ VY+R   +    K +                 V +F   R+K  ++   E 
Sbjct:   415 EYSSF-GQDVYIRMGFAKIEFKGREVVGMVVGSVVAIAVVLVVVFACFRKKIMKRYRGE- 472

Query:   464 SQDLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGP 523
                                N  +  + +D  LP+F   +++ AT++FS    LG GGFGP
Sbjct:   473 -------------------NFRKGIEEEDLDLPIFDRKTISIATDDFSYVNFLGRGGFGP 513

Query:   524 VYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL 583
             VYKG+L +G+E+AVKRLS+ SGQG+EEFKNE+ LIAKLQHRNLVR+LGCCI+  E +LI 
Sbjct:   514 VYKGKLEDGQEIAVKRLSANSGQGVEEFKNEVKLIAKLQHRNLVRLLGCCIQGEECMLIY 573

Query:   584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL 643
             EYMPNKSLD F+FD  +   L W+ R+ II G+A+G+LYLH  SR RIIHRDLKA NVLL
Sbjct:   574 EYMPNKSLDFFIFDERRSTELDWKKRMNIINGVARGILYLHQDSRLRIIHRDLKAGNVLL 633

Query:   644 DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             D DMNPKISDFGLA+ FGGD+ + +T R+VGT
Sbjct:   634 DNDMNPKISDFGLAKSFGGDQSESSTNRVVGT 665

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
 Identities = 281/665 (42%), Positives = 388/665 (58%)

Query:    41 LVSSSQRFELGFFSPGKSKSRYLGIWFRKVPD-TVVWVANRDRPISDHNAVLTISNNGKL 99
             LVS  + FELGFFSPG S  R+LGIW+  + D  VVWVANR  PISD + VL ISN+G L
Sbjct:    44 LVSPQKTFELGFFSPGSSTHRFLGIWYGNIEDKAVVWVANRATPISDQSGVLMISNDGNL 103

Query:   100 VLLNQTNGTIWSTNASSEA---KNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDT 156
             VLL+  N T+WS+N  S      N V  + D GN V+ +      T+  +W+SF++PTDT
Sbjct:   104 VLLDGKNITVWSSNIESSTTNNNNRVVSIHDTGNFVLSETD----TDRPIWESFNHPTDT 159

Query:   157 LLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGS-VKYTCTGE 215
              L  M++  + +        SWRS+ DPSPG ++  +D    P++  + G+  +   +G+
Sbjct:   160 FLPQMRVRVNPQTGDNHAFVSWRSETDPSPGNYSLGVDPSGAPEIVLWEGNKTRKWRSGQ 219

Query:   216 WTGDGFVSALSN----TNFLYKQFLVENQDEISYWYEPY--NRPSIMT-LKLSPSGFVTR 268
             W    F + + N    TN+LY   L    DE    Y  Y  + PS++   K+  +G    
Sbjct:   220 WNSAIF-TGIPNMSLLTNYLYGFKLSSPPDETGSVYFTYVPSDPSVLLRFKVLYNGTEEE 278

Query:   269 QLWNEDSNEWDELFSIPDDYCGKYGYCGANTICG-PDQKPMCQCLEGFRLKSQFNQT-G- 325
               WNE   +W +  S PD  C +Y  CG   IC       +C C+ G+   S  N + G 
Sbjct:   279 LRWNETLKKWTKFQSEPDSECDQYNRCGKFGICDMKGSNGICSCIHGYEQVSVGNWSRGC 338

Query:   326 ----PIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAY 381
                 P+KCER+ S   +  D+F+ L ++K PDF E+  +  ++ + C   CL+NC+C AY
Sbjct:   339 RRRTPLKCERNIS---VGEDEFLTLKSVKLPDF-EIPEHNLVDPEDCRERCLRNCSCNAY 394

Query:   382 ANSNVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPG-NKKXXXXXXXXXXXXX 440
             +   +  G GC++W  +L+D  +      G S+++R   S  G N+K             
Sbjct:   395 S---LVGGIGCMIWNQDLVDLQQ--FEAGGSSLHIRLADSEVGENRKTKIAVIVAVLVGV 449

Query:   441 XXXSVYIFCRQRRKCKEKEN-----METSQDLLAFDITTRPNEFSEANG--DRRDKSK-- 491
                 ++     R K K+  +       T   ++  D+T      S  +G  D   + K  
Sbjct:   450 ILIGIFALLLWRFKRKKDVSGAYCGKNTDTSVVVADLTKSKETTSAFSGSVDIMIEGKAV 509

Query:   492 -DSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEE 550
               S LP+FSL ++A AT +F  E +LG GGFGPVYKG L +G E+AVKRLS +SGQG++E
Sbjct:   510 NTSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLEDGREIAVKRLSGKSGQGVDE 569

Query:   551 FKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI 610
             FKNE++LIAKLQHRNLVR+LGCC E  EK+L+ EYMPNKSLD FLFD TK+ L+ W+ R 
Sbjct:   570 FKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQALIDWKLRF 629

Query:   611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTK 670
              IIEGIA+GLLYLH  SR RIIHRDLK SNVLLD +MNPKISDFG+AR+FGG++ + NT 
Sbjct:   630 SIIEGIARGLLYLHRDSRLRIIHRDLKVSNVLLDAEMNPKISDFGMARIFGGNQNEANTV 689

Query:   671 RIVGT 675
             R+VGT
Sbjct:   690 RVVGT 694

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2200888 AT1G61500 [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 1.7e-124, Sum P(2) = 1.7e-124
 Identities = 120/181 (66%), Positives = 145/181 (80%)

Query:   495 LPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNE 554
             L  F + ++  AT NFS+  KLG+GGFG VYKG+L +G+E+AVKRLSS SGQG EEF NE
Sbjct:   476 LDFFDMHTIQNATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNE 535

Query:   555 MLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE 614
             ++LI+KLQHRNLVR+LGCCIE+ EK+LI E+M NKSLD FLFD  K+  + W  R  II+
Sbjct:   536 IVLISKLQHRNLVRVLGCCIEEEEKLLIYEFMVNKSLDTFLFDSRKRLEIDWPKRFDIIQ 595

Query:   615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVG 674
             GIA+GLLYLHH SR R+IHRDLK SN+LLD  MNPKISDFGLARM+ G E Q NT+R+VG
Sbjct:   596 GIARGLLYLHHDSRLRVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVG 655

Query:   675 T 675
             T
Sbjct:   656 T 656

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 1190 (424.0 bits), Expect = 5.8e-121, P = 5.8e-121
 Identities = 282/705 (40%), Positives = 393/705 (55%)

Query:     1 MNGYSSMLQHLLSLIFF--LSMKVSLA-ADTVTPASFIRDGEKLVSSSQRFELGFFSPGK 57
             M G++  L  + +L+ F  L   VS + +++ T    IR+G+ L+S  + FELGFF+P  
Sbjct:     1 MAGFNRNLTLVTTLLIFHQLCSNVSCSTSNSFTRNHTIREGDSLISEDESFELGFFTPKN 60

Query:    58 SKSRYLGIWFRKV-PDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASS 116
             S  RY+GIW++ + P TVVWVANR++P+ DH   L I+++G LV++N  N TIWSTN   
Sbjct:    61 STLRYVGIWYKNIEPQTVVWVANREKPLLDHKGALKIADDGNLVIVNGQNETIWSTNVEP 120

Query:   117 EAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLS 176
             E+ N VA L   G+LV+  +S       + W+SF+ PTDT L  M++  +      R   
Sbjct:   121 ESNNTVAVLFKTGDLVLCSDSD---RRKWYWESFNNPTDTFLPGMRVRVNPSLGENRAFI 177

Query:   177 SWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTG---DGFVSALSNTNFLYK 233
              W+S+ DPSPGK++  +D     ++  + G  +   +G W      G    L  TN++Y 
Sbjct:   178 PWKSESDPSPGKYSMGIDPVGALEIVIWEGEKRKWRSGPWNSAIFTGIPDMLRFTNYIYG 237

Query:   234 QFLVENQDE---ISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCG 290
               L    D    + + Y   +    +   + P G   +  WN+D   W+ L   P   C 
Sbjct:   238 FKLSSPPDRDGSVYFTYVASDSSDFLRFWIRPDGVEEQFRWNKDIRNWNLLQWKPSTECE 297

Query:   291 KYGYCGANTICGPDQKPM----CQCLEGFRL--KSQFNQTG-PIKCERSHSSEC----IK 339
             KY  CG  ++C  D K      C C++GF    + Q+N       C+R     C    + 
Sbjct:   298 KYNRCGNYSVCD-DSKEFDSGKCSCIDGFEPVHQDQWNNRDFSGGCQRRVPLNCNQSLVA 356

Query:   340 G--DQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFG 397
             G  D F  L  IK PDF  V L+   N + C   C ++C+CKAYA   +  G GC++W  
Sbjct:   357 GQEDGFTVLKGIKVPDFGSVVLHN--NSETCKDVCARDCSCKAYA---LVVGIGCMIWTR 411

Query:   398 ELLDASRPIRNFTGQSVYLRQPAS--GPGNKKXXXXXXXXXXXXXXXXSVYIFCRQRRKC 455
             +L+D     R   G S+ +R   S  G G +                  + I+   + K 
Sbjct:   412 DLIDMEHFERG--GNSINIRLAGSKLGGGKENSTLWIIVFSVIGAFLLGLCIWILWKFKK 469

Query:   456 KEKENMETSQDLLAFDITTRPNEFSEAN-----GDRRDKSKDSWLPLFSLASVAAATENF 510
               K  +   +D+   DI     ++S +      GD+ D + D  LP+FS  SVA+AT +F
Sbjct:   470 SLKAFLWKKKDITVSDIIEN-RDYSSSPIKVLVGDQVD-TPD--LPIFSFDSVASATGDF 525

Query:   511 SMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
             + E KLG+GGFG VYKG    G E+AVKRLS +S QGLEEFKNE+LLIAKLQHRNLVR+L
Sbjct:   526 AEENKLGQGGFGTVYKGNFSEGREIAVKRLSGKSKQGLEEFKNEILLIAKLQHRNLVRLL 585

Query:   571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
             GCCIE  EK+L+ EYMPNKSLD FLFD +K+  L W+ R  +I GIA+GLLYLH  SR +
Sbjct:   586 GCCIEDNEKMLLYEYMPNKSLDRFLFDESKQGSLDWRKRWEVIGGIARGLLYLHRDSRLK 645

Query:   631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             IIHRDLKASN+LLD +MNPKISDFG+AR+F   +   NT R+VGT
Sbjct:   646 IIHRDLKASNILLDTEMNPKISDFGMARIFNYRQDHANTIRVVGT 690

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 612 (220.5 bits), Expect = 6.7e-119, Sum P(2) = 6.7e-119
 Identities = 121/194 (62%), Positives = 150/194 (77%)

Query:   483 NG-DRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLS 541
             NG +R+D S  ++   F + ++  AT NFS   KLG+GGFGPVYKG+L++G+E+ VKRL+
Sbjct:   463 NGFERQDVSGVNF---FEMHTIRTATNNFSPSNKLGQGGFGPVYKGKLVDGKEIGVKRLA 519

Query:   542 SQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKK 601
             S SGQG EEF NE+ LI+KLQHRNLVR+LG CI+  EK+LI E+M NKSLD+F+FDP  K
Sbjct:   520 SSSGQGTEEFMNEITLISKLQHRNLVRLLGYCIDGEEKLLIYEFMVNKSLDIFIFDPCLK 579

Query:   602 RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
               L W  R  II+GIA+GLLYLH  SR R+IHRDLK SN+LLD  MNPKISDFGLARMF 
Sbjct:   580 FELDWPKRFNIIQGIARGLLYLHRDSRLRVIHRDLKVSNILLDDRMNPKISDFGLARMFQ 639

Query:   662 GDELQGNTKRIVGT 675
             G + Q NT+R+VGT
Sbjct:   640 GTQYQDNTRRVVGT 653

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2197704 AT1G61390 [Arabidopsis thaliana (taxid:3702)]

 Score = 1149 (409.5 bits), Expect = 1.3e-116, P = 1.3e-116
 Identities = 282/690 (40%), Positives = 381/690 (55%)

Query:    11 LLSLIFFLSMKVSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKV 70
             LL LI F +   +   +T +P S    G+ L S    +ELGFFSP  S+ +Y+GIWF+ +
Sbjct:    30 LLLLIIFPTFGYA-DINTSSPLSI---GQTLSSPDGVYELGFFSPNNSRKQYVGIWFKNI 85

Query:    71 -PDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDG 129
              P  VVWVANRD+P++   A LTIS+NG L+LL+ T   IWST  +  +    A+L D G
Sbjct:    86 APQVVVWVANRDKPVTKTAANLTISSNGSLILLDGTQDVIWSTGEAFTSNKCHAELLDTG 145

Query:   130 NLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKF 189
             NLV+ D+ S  T    LW+SF+   +T+L    + +D+   + R L+SWRS+ DPSPG+F
Sbjct:   146 NLVVIDDVSGKT----LWKSFENLGNTMLPQSSVMYDIPRGKNRVLTSWRSNSDPSPGEF 201

Query:   190 TNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQD----EISY 245
             T      V P+     GS  Y  +G W    F S +   +  Y       QD      S+
Sbjct:   202 TLEFTPQVPPQGLIRRGSSPYWRSGPWAKTRF-SGIPGIDASYVSPFTVLQDVAKGTASF 260

Query:   246 WYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQ 305
              Y       +  + L+  G + + LWN D   W   F  P   C  Y  CG   +C   +
Sbjct:   261 SYSMLRNYKLSYVTLTSEGKM-KILWN-DGKSWKLHFEAPTSSCDLYRACGPFGLCVRSR 318

Query:   306 KPMCQCLEGFRLKS-----QFNQTG------PIKCERSHSSECIKG---DQFIKLDNIKA 351
              P C CL+GF  KS     + N T        + C  ++SS   +G   D F  +  +K 
Sbjct:   319 NPKCICLKGFVPKSDDEWKKGNWTSGCVRRTQLSCH-TNSSTKTQGKETDSFYHMTRVKT 377

Query:   352 PDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFTG 411
             PD  +++    +N +QC  +CL NC+C A+A      G GCL+W  EL+D  + + +  G
Sbjct:   378 PDLYQLA--GFLNAEQCYQDCLGNCSCTAFA---YISGIGCLVWNRELVDTVQFLSD--G 430

Query:   412 QSVYLRQPAS---GPGNKKXXXXXXXXXXXXXXXX-SVYIFCRQRRKCKEKENM--ETSQ 465
             +S+ LR  +S   G    K                 + Y   R R K  E   M   +SQ
Sbjct:   431 ESLSLRLASSELAGSNRTKIILGTTVSLSIFVILVFAAYKSWRYRTKQNEPNPMFIHSSQ 490

Query:   466 DLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVY 525
             D  A D+   P + S  N             LF + ++  AT NFS   KLG+GGFGPVY
Sbjct:   491 DAWAKDM--EPQDVSGVN-------------LFDMHTIRTATNNFSSSNKLGQGGFGPVY 535

Query:   526 KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY 585
             KG+L++G+E+AVKRLSS SGQG +EF NE+ LI+KLQH+NLVR+LGCCI+  EK+LI EY
Sbjct:   536 KGKLVDGKEIAVKRLSSSSGQGTDEFMNEIRLISKLQHKNLVRLLGCCIKGEEKLLIYEY 595

Query:   586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR 645
             + NKSLDVFLFD T K  + WQ R  II+G+A+GLLYLH  SR R+IHRDLK SN+LLD 
Sbjct:   596 LVNKSLDVFLFDSTLKFEIDWQKRFNIIQGVARGLLYLHRDSRLRVIHRDLKVSNILLDE 655

Query:   646 DMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              M PKISDFGLARM  G + Q NT+R+VGT
Sbjct:   656 KMIPKISDFGLARMSQGTQYQDNTRRVVGT 685

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.824
3rd Layer	2.7.11	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	675
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-41
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-41
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	4e-41
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-39
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-38
cd00028	116	cd00028, B_lectin, Bulb-type mannose-specific lect	1e-38
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	8e-38
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-36
smart00108	114	smart00108, B_lectin, Bulb-type mannose-specific l	1e-35
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-34
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-31
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-28
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-28
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	7e-27
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-26
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-25
pfam08276	66	pfam08276, PAN_2, PAN-like domain	1e-25
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-24
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-24
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-24
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-24
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-23
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	6e-23
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-22
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-21
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-21
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-21
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	5e-21
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-21
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-20
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-20
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	8e-20
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	9e-20
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	9e-20
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-19
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-19
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	2e-19
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-19
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	3e-19
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-19
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	6e-19
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	8e-19
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	9e-19
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-18
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	1e-18
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-18
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	2e-18
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-18
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	5e-18
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-17
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-17
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-17
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-17
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-17
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	3e-17
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	3e-17
pfam00954	110	pfam00954, S_locus_glycop, S-locus glycoprotein fa	3e-17
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	3e-17
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	5e-17
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	6e-17
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	6e-17
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	7e-17
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	7e-17
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	7e-17
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	7e-17
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	9e-17
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-16
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-16
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-16
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-16
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-16
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-16
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-16
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	2e-16
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-16
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	3e-16
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-16
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-16
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	5e-16
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-16
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	6e-16
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	8e-16
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	1e-15
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-15
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	1e-15
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-15
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-15
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-15
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	2e-15
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-15
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-15
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-15
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-15
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-15
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	5e-15
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	6e-15
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	9e-15
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	1e-14
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-14
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-14
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-14
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-14
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	2e-14
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	3e-14
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-14
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-14
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	4e-14
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-14
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	5e-14
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	9e-14
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	9e-14
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-13
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	2e-13
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-13
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-13
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-13
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-13
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	3e-13
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	4e-13
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	5e-13
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	5e-13
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	7e-13
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	1e-12
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-12
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-12
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-12
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	2e-12
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-12
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-12
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-12
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-12
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-12
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-12
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-12
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	3e-12
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	3e-12
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	4e-12
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	4e-12
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	6e-12
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	6e-12
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	9e-12
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-11
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-11
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-11
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-11
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	2e-11
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-11
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	2e-11
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-11
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-11
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-11
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-11
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	4e-11
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	4e-11
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	4e-11
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-11
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	5e-11
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	5e-11
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-11
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-11
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	7e-11
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	7e-11
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	8e-11
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-10
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	2e-10
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-10
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-10
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-10
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-10
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	3e-10
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-10
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	4e-10
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-10
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	4e-10
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	4e-10
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	6e-10
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	7e-10
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	8e-10
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	8e-10
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	1e-09
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-09
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-09
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	1e-09
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-09
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-09
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-09
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-09
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	4e-09
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	4e-09
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	5e-09
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	5e-09
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	7e-09
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-08
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	1e-08
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-08
smart00473	78	smart00473, PAN_AP, divergent subfamily of APPLE d	2e-08
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-08
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	3e-08
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-08
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	4e-08
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	4e-08
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	4e-08
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	5e-08
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	7e-08
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	7e-08
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	8e-08
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	1e-07
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-07
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	1e-07
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	2e-07
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	3e-07
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-07
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	4e-07
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-07
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	5e-07
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	6e-07
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	6e-07
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	7e-07
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	8e-07
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	8e-07
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	9e-07
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-06
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-06
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-06
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-06
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-06
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-06
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-06
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-06
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-06
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	3e-06
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	3e-06
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	3e-06
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-06
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-06
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	4e-06
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-06
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	5e-06
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	5e-06
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	5e-06
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	9e-06
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	1e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	1e-05
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	2e-05
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-05
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	3e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	4e-05
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	4e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-05
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	5e-05
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	6e-05
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	7e-05
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	8e-05
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	9e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-04
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-04
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	1e-04
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-04
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-04
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-04
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-04
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-04
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-04
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-04
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-04
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	3e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-04
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	4e-04
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	4e-04
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-04
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	4e-04
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	5e-04
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	6e-04
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	8e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	8e-04
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	8e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	0.001
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.001
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	0.001
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.002
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	0.002
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	0.002
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	0.002
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	0.003
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	0.003
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	0.004
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	0.004
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	0.004

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  151 bits (383), Expect = 2e-41
 Identities = 62/154 (40%), Positives = 86/154 (55%), Gaps = 10/154 (6%)

Query: 511 SMECKLGEGGFGPVYKGRLLNG-----EEVAVKRL-SSQSGQGLEEFKNEMLLIAKLQHR 564
           ++  KLGEG FG VYKG L         EVAVK L    S Q +EEF  E  ++ KL H 
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++LG C E+   ++++EYMP   L  +L    + + L     +     IA+G+ YL 
Sbjct: 62  NIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRK-NRPKELSLSDLLSFALQIARGMEYLE 120

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             S+   IHRDL A N L+  ++  KISDFGL+R
Sbjct: 121 --SK-NFIHRDLAARNCLVGENLVVKISDFGLSR 151

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  150 bits (382), Expect = 2e-41
 Identities = 62/154 (40%), Positives = 84/154 (54%), Gaps = 11/154 (7%)

Query: 511 SMECKLGEGGFGPVYKGRLL-----NGEEVAVKRL-SSQSGQGLEEFKNEMLLIAKLQHR 564
           ++  KLGEG FG VYKG+L         EVAVK L    S Q +EEF  E  ++ KL H 
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++LG C E+    +++EYM    L  +L     K  L     +     IA+G+ YL 
Sbjct: 62  NVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPK--LSLSDLLSFALQIARGMEYLE 119

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             S+   IHRDL A N L+  ++  KISDFGL+R
Sbjct: 120 --SK-NFIHRDLAARNCLVGENLVVKISDFGLSR 150

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score =  144 bits (366), Expect = 4e-41
 Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 6/115 (5%)

Query: 71  PDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGN 130
             TVVWVANR  P++D +  L + ++G LVL +     +WS+N S +    VA L+DDGN
Sbjct: 1   NQTVVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGN 60

Query: 131 LVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPS 185
           LV+ DNS        LWQSFD+PTDTLL   K G ++     R L+SW+S+ DPS
Sbjct: 61  LVLYDNSG-----KVLWQSFDHPTDTLLPGQKDG-NVVIGGSRRLTSWKSNTDPS 109

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  145 bits (369), Expect = 2e-39
 Identities = 60/161 (37%), Positives = 83/161 (51%), Gaps = 11/161 (6%)

Query: 510 FSMECKLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQH 563
             +  KLGEG FG VYKG L         +VAVK L   +  +  EEF  E  ++ KL H
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSH 60

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N+VR+LG C +     ++ EYMP   L  FL        L  +  + +   IA+G+ YL
Sbjct: 61  PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFL--RKHGEKLTLKDLLQMALQIAKGMEYL 118

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
              S+   +HRDL A N L+  ++  KISDFGL+R    D+
Sbjct: 119 E--SK-NFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDD 156

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  143 bits (363), Expect = 1e-38
 Identities = 63/155 (40%), Positives = 86/155 (55%), Gaps = 14/155 (9%)

Query: 515 KLGEGGFGPVYKGRLLNGE----EVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRI 569
           KLGEG FG VYKG+L   +    EVAVK L    S +  ++F  E  ++ KL H N+VR+
Sbjct: 2   KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRL 61

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLYL 623
           LG C E+    L+LEYM    L  +L      F   +K  L  +  +     IA+G+ YL
Sbjct: 62  LGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL 121

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              S+ + +HRDL A N L+  D+  KISDFGL+R
Sbjct: 122 A--SK-KFVHRDLAARNCLVGEDLVVKISDFGLSR 153

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin

 Score =  138 bits (349), Expect = 1e-38
 Identities = 51/119 (42%), Positives = 68/119 (57%), Gaps = 6/119 (5%)

Query: 35  IRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTIS 94
           +  G+ LVSS   FELGFF        Y  I ++    TVVWVANRD P S  +  LT+ 
Sbjct: 4   LSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNP-SGSSCTLTLQ 62

Query: 95  NNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYP 153
           ++G LV+ + +   +WS+N +    N V  L DDGNLV+ D+       N+LWQSFDYP
Sbjct: 63  SDGNLVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDSD-----GNFLWQSFDYP 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  139 bits (353), Expect = 8e-38
 Identities = 62/163 (38%), Positives = 88/163 (53%), Gaps = 10/163 (6%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           LGEGGFG VY  R    G++VA+K +    S   LEE   E+ ++ KL H N+V++ G  
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
            ++    L++EY    SL   L +   K  L     + I+  I +GL YLH      IIH
Sbjct: 61  EDENHLYLVMEYCEGGSLKDLLKENEGK--LSEDEILRILLQILEGLEYLHS---NGIIH 115

Query: 634 RDLKASNVLLD-RDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           RDLK  N+LLD  +   K++DFGL+++   D+    T  IVGT
Sbjct: 116 RDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT--IVGT 156

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  136 bits (345), Expect = 3e-36
 Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 11/164 (6%)

Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           KLG G FG VYK +    G+ VAVK L   S+  +  +  + E+ ++ +L H N+VR++ 
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65

Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              ++    L++EY     L  +L   ++   L       I   I +GL YLH      I
Sbjct: 66  AFEDKDHLYLVMEYCEGGDLFDYL---SRGGPLSEDEAKKIALQILRGLEYLH---SNGI 119

Query: 632 IHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           IHRDLK  N+LLD +   KI+DFGLA+         +    VGT
Sbjct: 120 IHRDLKPENILLDENGVVKIADFGLAKKLLKS--SSSLTTFVGT 161

Length = 260

>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin

 Score =  129 bits (327), Expect = 1e-35
 Identities = 52/120 (43%), Positives = 70/120 (58%), Gaps = 7/120 (5%)

Query: 33  SFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLT 92
           + +  G+ LVS +  FELGFF+       Y  I ++    TVVWVANRD P+SD +  LT
Sbjct: 2   NTLSSGQTLVSGNSLFELGFFTLIMQN-DYNLILYKSSSRTVVWVANRDNPVSD-SCTLT 59

Query: 93  ISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDY 152
           + ++G LVL +     +WS+N +    N V  L DDGNLVI D+       N+LWQSFDY
Sbjct: 60  LQSDGNLVLYDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYDSDG-----NFLWQSFDY 114

Length = 114

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  131 bits (331), Expect = 2e-34
 Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 21/173 (12%)

Query: 510 FSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +  KLGEG FG VY  R    G+ VA+K +   +  +  E    E+ ++ KL+H N+V
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIAQGLLY 622
           R+     ++ +  L++EY     L   L         + R    Q        I   L Y
Sbjct: 61  RLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQ--------ILSALEY 112

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           LH      I+HRDLK  N+LLD D + K++DFGLAR     E        VGT
Sbjct: 113 LH---SKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEK---LTTFVGT 159

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  121 bits (306), Expect = 5e-31
 Identities = 59/177 (33%), Positives = 83/177 (46%), Gaps = 21/177 (11%)

Query: 509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRN 565
            ++    LG G FG VY       GE +AVK   LS  S + LE  + E+ +++ LQH N
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60

Query: 566 LVRILGCCIEQGEKIL--ILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIAQ 618
           +VR  G   ++ +  L   LEY+   SL   L           R    Q        I +
Sbjct: 61  IVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQ--------ILE 112

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           GL YLH      I+HRD+K +N+L+D D   K++DFG A+  G  E    T  + GT
Sbjct: 113 GLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGT 166

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  114 bits (287), Expect = 3e-28
 Identities = 57/152 (37%), Positives = 82/152 (53%), Gaps = 13/152 (8%)

Query: 515 KLGEGGFGPVYKGRLLN-----GEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           +LGEG FG V   R        GE+VAVK L+ S   Q   +F+ E+ ++  L H N+V+
Sbjct: 11  QLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVK 70

Query: 569 ILGCCIEQGEKI--LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
             G C + G +   LI+EY+P+ SL  +L     +  L           I +G+ YL   
Sbjct: 71  YKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFS--SQICKGMDYLG-- 126

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           S+ R IHRDL A N+L++ +   KISDFGLA+
Sbjct: 127 SQ-RYIHRDLAARNILVESEDLVKISDFGLAK 157

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  113 bits (285), Expect = 3e-28
 Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 15/172 (8%)

Query: 509 NFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRN 565
           N+ +   +G G FG VYKG  L  G+ VA+K++S +    + L+    E+ L+  L+H N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLGWQARIGIIEGIAQGLLYL 623
           +V+ +G         +ILEY  N SL   +  F P  + L+        +  + QGL YL
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLV-----AVYVYQVLQGLAYL 115

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H      +IHRD+KA+N+L  +D   K++DFG+A           +  +VGT
Sbjct: 116 HEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS--VVGT 162

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  109 bits (275), Expect = 7e-27
 Identities = 56/163 (34%), Positives = 91/163 (55%), Gaps = 11/163 (6%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           K+G+GGFG VYK R    G+EVA+K +  +S +  E+  NE+ ++ K +H N+V+  G  
Sbjct: 7   KIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSY 66

Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG-IIEGIAQGLLYLHHYSRFRII 632
           +++ E  +++E+    SL   L   T + L   +++I  + + + +GL YLH      II
Sbjct: 67  LKKDELWIVMEFCSGGSLKD-LLKSTNQTLT--ESQIAYVCKELLKGLEYLHSN---GII 120

Query: 633 HRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           HRD+KA+N+LL  D   K+ DFGL+              +VGT
Sbjct: 121 HRDIKAANILLTSDGEVKLIDFGLSAQL---SDTKARNTMVGT 160

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  109 bits (274), Expect = 1e-26
 Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 7/158 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG G FG V+ G      +VAVK L   +    E F  E  ++ KL+H  LV
Sbjct: 6   ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLV 64

Query: 568 RILGCCIEQGEKILIL-EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           ++   C  + E I I+ EYM   SL  FL     K+L      + +   IA+G+ YL   
Sbjct: 65  QLYAVC-SEEEPIYIVTEYMSKGSLLDFLKSGEGKKLR-LPQLVDMAAQIAEGMAYLE-- 120

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                IHRDL A N+L+  ++  KI+DFGLAR+   DE
Sbjct: 121 -SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  106 bits (266), Expect = 1e-25
 Identities = 53/152 (34%), Positives = 84/152 (55%), Gaps = 4/152 (2%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E F++E KLG G FG V++G   N   VA+K L S      ++F+ E+  + +L+H++L+
Sbjct: 6   EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLI 65

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +   C       +I E M   SL  FL  P + ++L   + I +   +A+G+ YL    
Sbjct: 66  SLFAVCSVGEPVYIITELMEKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLEEQ- 123

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
               IHRDL A N+L+  D+  K++DFGLAR+
Sbjct: 124 --NSIHRDLAARNILVGEDLVCKVADFGLARL 153

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|219774 pfam08276, PAN_2, PAN-like domain

 Score = 99.7 bits (249), Expect = 1e-25
 Identities = 30/65 (46%), Positives = 45/65 (69%)

Query: 337 CIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWF 396
           C  GD F++L N+K PD     +++S+ L++C   CL NC+C AYA +++  GSGCL+W 
Sbjct: 1   CGGGDGFLRLPNMKLPDTTAAIVDRSIGLKECEQRCLSNCSCTAYAYADIRGGSGCLIWT 60

Query: 397 GELLD 401
           GEL+D
Sbjct: 61  GELVD 65

Length = 66

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  104 bits (261), Expect = 1e-24
 Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 15/167 (8%)

Query: 514 CKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEF----KNEMLLIAKLQHRNLVR 568
            ++GEG +G VYK R    GE VA+K++  ++ +  E F      E+ L+ KL+H N+VR
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKIRMENEK--EGFPITAIREIKLLQKLRHPNIVR 62

Query: 569 ILGCCIE--QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           +        +G   ++ EYM +  L   L  P  K     Q +   ++ + +GL YLH  
Sbjct: 63  LKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTES-QIK-CYMKQLLEGLQYLHSN 119

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
               I+HRD+K SN+L++ D   K++DFGLAR +        T R++
Sbjct: 120 ---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI 163

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score =  104 bits (260), Expect = 1e-24
 Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 14/156 (8%)

Query: 516 LGEGGFGPVYKGRLL-NGE----EVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE     VA+K L  ++  +  +E  +E  ++A + H ++VR+
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 570 LGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
           LG C+    ++ LI + MP   L  ++ +      +G Q  +     IA+G+ YL     
Sbjct: 75  LGICL--SSQVQLITQLMPLGCLLDYVRNHKDN--IGSQYLLNWCVQIAKGMSYL---EE 127

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            R++HRDL A NVL+    + KI+DFGLA++   DE
Sbjct: 128 KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score =  103 bits (257), Expect = 2e-24
 Identities = 67/153 (43%), Positives = 82/153 (53%), Gaps = 19/153 (12%)

Query: 516 LGEGGFGPV--YKGRLLN---GEEVAVKRLSSQSGQGLEE-FKNEMLLIAKLQHRNLVRI 569
           LGEG FG V  Y     N   GE VAVK L  + GQ     +K E+ ++  L H N+V+ 
Sbjct: 12  LGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKY 71

Query: 570 LGCCIEQGEKI--LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH--H 625
            GCC EQG K   LI+EY+P  SL  +L     K  L     +   + I +G+ YLH  H
Sbjct: 72  KGCCSEQGGKGLQLIMEYVPLGSLRDYL----PKHKLNLAQLLLFAQQICEGMAYLHSQH 127

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           Y     IHRDL A NVLLD D   KI DFGLA+
Sbjct: 128 Y-----IHRDLAARNVLLDNDRLVKIGDFGLAK 155

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  101 bits (255), Expect = 7e-24
 Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 17/166 (10%)

Query: 515 KLGEGGFGPVYKG-RLLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           K+GEG  G VYK      G+EVA+K  RL  Q+ + +    NE+L++   +H N+V    
Sbjct: 26  KIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELI---INEILIMKDCKHPNIVDYYD 82

Query: 572 CCIEQGEKILILEYMPNKSL-DVFLFDPTKKRLLGWQARIG-IIEGIAQGLLYLHHYSRF 629
             +   E  +++EYM   SL D+        R+   + +I  +   + QGL YLH     
Sbjct: 83  SYLVGDELWVVMEYMDGGSLTDII--TQNFVRMN--EPQIAYVCREVLQGLEYLH---SQ 135

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            +IHRD+K+ N+LL +D + K++DFG A      + +     +VGT
Sbjct: 136 NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT--KEKSKRNSVVGT 179

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  100 bits (251), Expect = 2e-23
 Identities = 57/159 (35%), Positives = 83/159 (52%), Gaps = 27/159 (16%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFK----NEMLLIAKLQHRNLVRI 569
           KLGEG +G VYK R    GE VA+K++  +     E        E+ L+ +L+H N+V+ 
Sbjct: 6   KLGEGTYGVVYKARDKKTGEIVALKKI--RLDNEEEGIPSTALREISLLKELKHPNIVK- 62

Query: 570 LGCCIEQGEKI-LILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLY 622
           L   I    K+ L+ EY  +  L  +L        P   + + +Q        + +GL Y
Sbjct: 63  LLDVIHTERKLYLVFEYC-DMDLKKYLDKRPGPLSPNLIKSIMYQ--------LLRGLAY 113

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H  S  RI+HRDLK  N+L++RD   K++DFGLAR FG
Sbjct: 114 CH--SH-RILHRDLKPQNILINRDGVLKLADFGLARAFG 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 99.1 bits (247), Expect = 6e-23
 Identities = 60/165 (36%), Positives = 82/165 (49%), Gaps = 27/165 (16%)

Query: 516 LGEGGFGPVYKGRL--LNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           LGEG FG VYKG L   N       VA+K L  +   +  +EF+ E  L++ LQH N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFLF-------------DPTKKRLLGWQARIGIIEG 615
           +LG C ++    ++ EY+ +  L  FL              D T K  L     + I   
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQ 132

Query: 616 IAQGLLYL--HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           IA G+ YL  HH+     +HRDL A N L+   +  KISDFGL+R
Sbjct: 133 IAAGMEYLSSHHF-----VHRDLAARNCLVGEGLTVKISDFGLSR 172

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 97.0 bits (242), Expect = 2e-22
 Identities = 58/165 (35%), Positives = 90/165 (54%), Gaps = 10/165 (6%)

Query: 511 SMECKLGEGGFGPVYKGRL-LNGEE---VAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRN 565
           ++E  +G G FG V +GRL L G++   VA+K L +  S +   +F  E  ++ +  H N
Sbjct: 7   TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPN 66

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           ++R+ G   +    ++I EYM N SLD FL +   K        +G++ GIA G+ YL  
Sbjct: 67  IIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGK--FTVGQLVGMLRGIASGMKYL-- 122

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTK 670
            S    +HRDL A N+L++ ++  K+SDFGL+R     E    TK
Sbjct: 123 -SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTK 166

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 94.6 bits (236), Expect = 1e-21
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 11/155 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRN 565
            +      LG+G  G VYK R    G+  A+K++      +  ++   E+  +   +   
Sbjct: 1   SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPY 60

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI--GIIEGIAQGLLYL 623
           +V+  G   ++GE  ++LEYM   SL   L     K++      +   I   I +GL YL
Sbjct: 61  VVKCYGAFYKEGEISIVLEYMDGGSLADLL-----KKVGKIPEPVLAYIARQILKGLDYL 115

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           H      IIHRD+K SN+L++     KI+DFG+++
Sbjct: 116 HTKRH--IIHRDIKPSNLLINSKGEVKIADFGISK 148

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 94.8 bits (236), Expect = 1e-21
 Identities = 53/161 (32%), Positives = 75/161 (46%), Gaps = 21/161 (13%)

Query: 516 LGEGGFGPVYKGRLLNGEE------VAVKRLSSQSGQGLEE-FKNEMLLIAKLQHRNLVR 568
           LGEG FG V+ G   + E       VAVK L   +     + F+ E  L+   QH N+V+
Sbjct: 13  LGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK 72

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLGWQARIG---------IIEGIA 617
             G C E    I++ EYM +  L+ FL    P    L    + +G         I   IA
Sbjct: 73  FYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIA 132

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            G++YL   +    +HRDL   N L+  D+  KI DFG++R
Sbjct: 133 SGMVYL---ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSR 170

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 94.0 bits (234), Expect = 2e-21
 Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 8/144 (5%)

Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE 575
           +G+G FG V  G    G++VAVK L   S    + F  E  ++  L+H NLV++LG  ++
Sbjct: 14  IGKGEFGDVMLG-DYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ 71

Query: 576 QGEKILILEYMPNKSLDVFLFDPTKKR-LLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
                ++ EYM   SL  +L   ++ R ++    ++G    + +G+ YL        +HR
Sbjct: 72  GNPLYIVTEYMAKGSLVDYL--RSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHR 126

Query: 635 DLKASNVLLDRDMNPKISDFGLAR 658
           DL A NVL+  D+  K+SDFGLA+
Sbjct: 127 DLAARNVLVSEDLVAKVSDFGLAK 150

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 92.7 bits (231), Expect = 5e-21
 Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 14/171 (8%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
           E F +  KLGEG +G VYK      G+ VA+K +  +    L+E   E+ ++ +     +
Sbjct: 3   EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYI 60

Query: 567 VRILGCCIEQGEKILILEYMPNKS-LDVFLFDPTKKRLLGWQARIGII-EGIAQGLLYLH 624
           V+  G   +  +  +++EY    S  D  +   T K L   +  I  I     +GL YLH
Sbjct: 61  VKYYGSYFKNTDLWIVMEYCGAGSVSD--IMKITNKTLT--EEEIAAILYQTLKGLEYLH 116

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
                + IHRD+KA N+LL+ +   K++DFG++        + NT  ++GT
Sbjct: 117 ---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNT--VIGT 162

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 92.2 bits (230), Expect = 8e-21
 Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 23/172 (13%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKR--LSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           ++G+G FG VY  R   +G+   +K   LS+ S +  E+  NE+ ++ KL H N+++   
Sbjct: 7   QIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYE 66

Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG--------IAQGLLYL 623
              E+G+  +++EY     L   +    KK+    +      E         +   L YL
Sbjct: 67  SFEEKGKLCIVMEYADGGDLSQKI----KKQK---KEGKPFPEEQILDWFVQLCLALKYL 119

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H  SR +I+HRD+K  N+ L  +   K+ DFG++++         T  +VGT
Sbjct: 120 H--SR-KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKT--VVGT 166

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 91.2 bits (226), Expect = 2e-20
 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)

Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG V+ G  L   +VA+K +  +     E+F  E  ++ KL H  LV++ G C 
Sbjct: 11  EIGSGQFGLVWLGYWLEKRKVAIKTIR-EGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCT 69

Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           E+    L+ E+M +  L  +L    ++     +  +G+   + +G+ YL   +   +IHR
Sbjct: 70  ERSPICLVFEFMEHGCLSDYL--RAQRGKFSQETLLGMCLDVCEGMAYLESSN---VIHR 124

Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           DL A N L+  +   K+SDFG+ R    D+   +T
Sbjct: 125 DLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 93.3 bits (230), Expect = 2e-20
 Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 14/176 (7%)

Query: 509 NFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH-R 564
           ++ +  KLGEG FG VY  R  + + VA+K L+ +     + +E F  E+ ++A L H  
Sbjct: 1   SYRILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++     ++G   L++EY+   SL+  L    +K  L     + I+  I   L YLH
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118

Query: 625 HYSRFRIIHRDLKASNVLLDRDMN-PKISDFGLARMFGGD----ELQGNTKRIVGT 675
                 IIHRD+K  N+LLDRD    K+ DFGLA++         +       VGT
Sbjct: 119 ---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGT 171

Length = 384

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 89.1 bits (221), Expect = 8e-20
 Identities = 59/157 (37%), Positives = 81/157 (51%), Gaps = 6/157 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  KLG G FG V+ G      +VA+K L   S    E F  E  L+ +LQH  LV
Sbjct: 6   ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLV 64

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P   +L      I +   IA+G+ ++    
Sbjct: 65  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKL-TINKLIDMAAQIAEGMAFIE--- 119

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   IHRDL+A+N+L+   +  KI+DFGLAR+   +E
Sbjct: 120 RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 89.0 bits (221), Expect = 9e-20
 Identities = 54/153 (35%), Positives = 76/153 (49%), Gaps = 11/153 (7%)

Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           KLG G FG V++G   N   VAVK L   +    ++F  E  ++ KL+H  L+++   C 
Sbjct: 13  KLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCT 71

Query: 575 EQGEKILIL-EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL--HHYSRFRI 631
              E I I+ E M   SL  +L      R L     I +   +A G+ YL   +Y     
Sbjct: 72  -LEEPIYIVTELMKYGSLLEYLQG-GAGRALKLPQLIDMAAQVASGMAYLEAQNY----- 124

Query: 632 IHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           IHRDL A NVL+  +   K++DFGLAR+   D 
Sbjct: 125 IHRDLAARNVLVGENNICKVADFGLARVIKEDI 157

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 88.9 bits (221), Expect = 9e-20
 Identities = 56/158 (35%), Positives = 77/158 (48%), Gaps = 20/158 (12%)

Query: 516 LGEGGFGPVYKG--RLLNGEE--VAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           LG G FG V KG   + +G+E  VAVK L       G +EF  E  ++A+L H  +VR++
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62

Query: 571 GCCIEQGEK-ILILEYMPNKSLDVFLFDP---TKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           G C  +GE  +L++E  P   L  +L          L     ++      A G+ YL   
Sbjct: 63  GVC--KGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQV------AMGMAYLES- 113

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             F  +HRDL A NVLL      KISDFG++R  G   
Sbjct: 114 KHF--VHRDLAARNVLLVNRHQAKISDFGMSRALGAGS 149

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 90.1 bits (224), Expect = 1e-19
 Identities = 55/182 (30%), Positives = 93/182 (51%), Gaps = 19/182 (10%)

Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL---SSQSGQGLEEFKNEMLLIAKL 561
              ++ +  KLGEG FG VYK R +  G  VA+K++   + + G  +   + E+ ++ KL
Sbjct: 6   KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALR-EIKILKKL 64

Query: 562 QHRNLVRILGCCIEQGEKI--------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGII 613
           +H N+V ++   +E+ +K         ++  YM +  L   L +P   +L   Q +   +
Sbjct: 65  KHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYM-DHDLSGLLENP-SVKLTESQIK-CYM 121

Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
             + +G+ YLH      I+HRD+KA+N+L+D     KI+DFGLAR + G           
Sbjct: 122 LQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGG 178

Query: 674 GT 675
           GT
Sbjct: 179 GT 180

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 89.4 bits (221), Expect = 2e-19
 Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 12/159 (7%)

Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE V    A+K L+  +G +   EF +E L++A + H +LVR+
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + L+ + MP+  L  ++ +   K  +G Q  +     IA+G++YL      
Sbjct: 75  LGVCLSPTIQ-LVTQLMPHGCLLDYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER--- 128

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGN 668
           R++HRDL A NVL+    + KI+DFGLAR+  GDE + N
Sbjct: 129 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 167

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 88.3 bits (219), Expect = 2e-19
 Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 19/164 (11%)

Query: 516 LGEGGFGPVYKGRLLNGE----EVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LGEG FG V +G+L   +    +VAVK  +L   +   +EEF +E   +    H N++++
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 570 LGCCIEQGEK------ILILEYMPNKSLDVFLFDP---TKKRLLGWQARIGIIEGIAQGL 620
           +G C E          ++IL +M +  L  FL           L  Q  +  +  IA G+
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-MFGGD 663
            YL   S    IHRDL A N +L  DM   ++DFGL++ ++ GD
Sbjct: 127 EYL---SNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGD 167

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 88.4 bits (220), Expect = 3e-19
 Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 40/173 (23%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN-----------EML 556
            +    KLGEG +  VYK R    G  VA+K++       L E K            E+ 
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIK------LGERKEAKDGINFTALREIK 54

Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMP--------NKSLDVFLFDPTKKRLLGWQA 608
           L+ +L+H N++ +L     +    L+ E+M         +KS+   L     K  +    
Sbjct: 55  LLQELKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSI--VLTPADIKSYM-LM- 110

Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
                    +GL YLH      I+HRDLK +N+L+  D   K++DFGLAR FG
Sbjct: 111 -------TLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFG 153

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 87.6 bits (217), Expect = 3e-19
 Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 15/173 (8%)

Query: 509 NFSMECKLGEGGFGPVYKG-RLLNGEEVAVKR--LSSQSGQGLEEFKNEMLLIAKLQHRN 565
           +F +  K+G+G FG V+K  R  +    A+K+  LS  + +  EE  +E  ++AKL    
Sbjct: 1   DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL---LGWQARIGIIEGIAQGLLY 622
           ++R     +++G+  +++EY  N  L   L     + L     W+  I       Q LL 
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFI-------QILLG 113

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           L H    +I+HRD+K+ N+ LD   N KI D G+A++   +    NT  IVGT
Sbjct: 114 LAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT--IVGT 164

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 87.8 bits (218), Expect = 4e-19
 Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 21/158 (13%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN--EMLLIAKLQHRNLVRILG 571
           K+GEG +G VYK R  L GE VA+K++  +            E+ L+ +L H N++++L 
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLD 65

Query: 572 CCIEQGEKILILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
               +G+  L+ E+M +  L   +         +  +   +Q        + QGL + H 
Sbjct: 66  VFRHKGDLYLVFEFM-DTDLYKLIKDRQRGLPESLIKSYLYQ--------LLQGLAFCH- 115

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
                I+HRDLK  N+L++ +   K++DFGLAR FG  
Sbjct: 116 --SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSP 151

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 87.6 bits (217), Expect = 6e-19
 Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 30/180 (16%)

Query: 516 LGEGGFGPVYKGR---LLNGEE---VAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVR 568
           +G+G FG V++ R   LL  E    VAVK L  + S     +F+ E  L+A+  H N+V+
Sbjct: 13  IGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK 72

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL-------------------LGWQAR 609
           +LG C       L+ EYM    L+ FL   + +                     L    +
Sbjct: 73  LLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQ 132

Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-MFGGDELQGN 668
           + I + +A G+ YL   S  + +HRDL   N L+  +M  KI+DFGL+R ++  D  + +
Sbjct: 133 LCIAKQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAS 189

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 86.3 bits (214), Expect = 8e-19
 Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 6/149 (4%)

Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE 575
           LG G FG V+ G+     +VA+K +   +    ++F  E  ++ KL H NLV++ G C +
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRD 635
           Q    ++ EYM N  L  +L    +K  LG +  + +   + + + YL        IHRD
Sbjct: 71  QRPIFIVTEYMANGCLLNYL--RERKGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRD 125

Query: 636 LKASNVLLDRDMNPKISDFGLARMFGGDE 664
           L A N L+  D   K+SDFGLAR    D+
Sbjct: 126 LAARNCLVGEDNVVKVSDFGLARYVLDDQ 154

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 86.4 bits (214), Expect = 9e-19
 Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 6/154 (3%)

Query: 511 SMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +M+ KLG G +G VY+G        VAVK L   +   +EEF  E  ++ +++H NLV++
Sbjct: 9   TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQL 67

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C  +    +I E+M   +L  +L +   ++ +     + +   I+  + YL    + 
Sbjct: 68  LGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVNAVVLLYMATQISSAMEYLE---KK 123

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
             IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 124 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 86.6 bits (215), Expect = 1e-18
 Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 16/154 (10%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFK-NEMLLIAKLQHRNLVRIL 570
           K+GEG +G VYK R  L GE VA+K  RL ++  +G+      E+ L+ +L H N+VR+L
Sbjct: 6   KIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKELNHPNIVRLL 64

Query: 571 GCCIEQGEKILILEYMPNKSLDVFL---FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
                + +  L+ E+     LD+ L    D +    L        +  + QG+ Y H  S
Sbjct: 65  DVVHSENKLYLVFEF-----LDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH--S 117

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
             R++HRDLK  N+L+DR+   K++DFGLAR FG
Sbjct: 118 H-RVLHRDLKPQNLLIDREGALKLADFGLARAFG 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 86.4 bits (214), Expect = 1e-18
 Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 24/162 (14%)

Query: 516 LGEGGFGPVYKGRL-----LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+  
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71

Query: 571 GCCIEQGEK--ILILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLY 622
           G C   G +   L++EY+P  SL  +L       D  K  L   Q        I +G+ Y
Sbjct: 72  GVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQ--------ICKGMEY 123

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           L      R +HRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 124 L---GSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 86.0 bits (213), Expect = 1e-18
 Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 17/157 (10%)

Query: 516 LGEGGFGPVYKG--RLLNGE----EVAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           LG G FG VY+G  R  +G+    +VAVK L  S S Q   +F  E L+++K  H+N+VR
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGIAQGLLYLH 624
           ++G   E+  + ++LE M    L  FL +    P +   L  +  +     +A+G  YL 
Sbjct: 74  LIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE 133

Query: 625 HYSRFRIIHRDLKASNVLLDR---DMNPKISDFGLAR 658
                  IHRD+ A N LL         KI+DFG+AR
Sbjct: 134 ---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMAR 167

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 85.7 bits (212), Expect = 2e-18
 Identities = 57/160 (35%), Positives = 79/160 (49%), Gaps = 20/160 (12%)

Query: 516 LGEGGFGPVYKGRLLN----GEE---VAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLV 567
           LG G FG VY+G   +    G     VAVK L   +  Q  +EF  E  L++   H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKR----LLGWQARIGIIEGIAQGLLYL 623
           ++LG C+    + +I+E M    L  +L D   +R    LL  +  + I   +A+G +YL
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122

Query: 624 HHYSRFRIIHRDLKASNVLL-----DRDMNPKISDFGLAR 658
               +   IHRDL A N L+     D D   KI DFGLAR
Sbjct: 123 E---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 84.1 bits (208), Expect = 4e-18
 Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 14/149 (9%)

Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRILGCC 573
           K+G+G FG VYKG L    EVAVK   S     L  +F  E  ++ +  H N+V+++G C
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 574 IEQGEKILILEYMPNKSLDVFLFDP----TKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +++    +++E +P  SL  FL       T K+LL       +    A G+ YL   S+ 
Sbjct: 62  VQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQ------MSLDAAAGMEYLE--SK- 112

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             IHRDL A N L+  +   KISDFG++R
Sbjct: 113 NCIHRDLAARNCLVGENNVLKISDFGMSR 141

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 84.3 bits (208), Expect = 5e-18
 Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 5/157 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +  KLG G FG V+ G   N  +VAVK L   +   ++ F  E  L+  LQH  LV
Sbjct: 6   ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLV 64

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R+     ++    +I EYM   SL  FL      ++L     I     IA+G+ Y+    
Sbjct: 65  RLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE--- 120

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   IHRDL+A+NVL+   +  KI+DFGLAR+   +E
Sbjct: 121 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 82.9 bits (205), Expect = 1e-17
 Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 16/151 (10%)

Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLS----SQSGQG-LEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VY+G  L +G+  AVK +S     Q+GQ  +++ + E+ L++KLQH N+V+ 
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQY 67

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           LG   E+    + LE +P  SL   L  +    + ++    R      I  GL YLH   
Sbjct: 68  LGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTR-----QILLGLEYLH--D 120

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           R   +HRD+K +N+L+D +   K++DFG+A+
Sbjct: 121 R-NTVHRDIKGANILVDTNGVVKLADFGMAK 150

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 82.6 bits (204), Expect = 2e-17
 Identities = 56/158 (35%), Positives = 82/158 (51%), Gaps = 26/158 (16%)

Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKR--LSSQSGQG-------LEEFKNEMLLIAKLQHRN 565
           +G G FG VY G    +GE +AVK+  L S S          L+    E+ L+ +LQH N
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIAQGL 620
           +V+ LG  ++     + LEY+P  S+   L     F+ T  R          +  I +GL
Sbjct: 68  IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVR--------NFVRQILKGL 119

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            YLH  +R  IIHRD+K +N+L+D     KISDFG+++
Sbjct: 120 NYLH--NR-GIIHRDIKGANILVDNKGGIKISDFGISK 154

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 82.7 bits (205), Expect = 2e-17
 Identities = 47/168 (27%), Positives = 87/168 (51%), Gaps = 21/168 (12%)

Query: 515 KLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQG--LEEFKNEMLLIAKLQHRNLVRILG 571
           ++GEG  G V+K +    GE VA+K+++ +  +G    +   E+  +   QH  +V++L 
Sbjct: 7   RIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66

Query: 572 CCIEQGEKILILEYMPN------KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
                   +L++EYMP+      +  +  L +   K  +       +++G+A    Y+H 
Sbjct: 67  VFPHGSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYM-----RMLLKGVA----YMH- 116

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
                I+HRDLK +N+L+  D   KI+DFGLAR+F  +E +  + ++ 
Sbjct: 117 --ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVA 162

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 82.2 bits (203), Expect = 2e-17
 Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 30/177 (16%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLS------SQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           LG G F   Y+ R +  G  +AVK+++      S+  + +E  + E+ L+A+L H +++R
Sbjct: 8   LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIR 67

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           +LG   E     L +E+M   S+   L  +   K+ ++     I   E + +GL YLH  
Sbjct: 68  MLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVI-----INYTEQLLRGLSYLHEN 122

Query: 627 SRFRIIHRDLKASNVLLD---RDMNPKISDFGLA-----RMFGGDELQGNTKRIVGT 675
              +IIHRD+K +N+L+D   + +  +I+DFG A     +  G  E QG   +++GT
Sbjct: 123 ---QIIHRDVKGANLLIDSTGQRL--RIADFGAAARLAAKGTGAGEFQG---QLLGT 171

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 82.5 bits (204), Expect = 2e-17
 Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 21/157 (13%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           K+GEG +G VYKGR    G+ VA+K  RL S+          E+ L+ +LQH N+V +  
Sbjct: 7   KIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQD 66

Query: 572 CCIEQGEKILILEYMP---NKSLDVF----LFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
             +++    LI E++     K LD        D    +   +Q        I QG+L+ H
Sbjct: 67  VLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQ--------ILQGILFCH 118

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
                R++HRDLK  N+L+D     K++DFGLAR FG
Sbjct: 119 ---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFG 152

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 82.0 bits (203), Expect = 3e-17
 Identities = 54/153 (35%), Positives = 71/153 (46%), Gaps = 18/153 (11%)

Query: 515 KLGEGGFGPVYKGRLLN--GE--EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRI 569
           KLG+G FG V +G      G+   VAVK L S      +++F  E  ++  L H NL+R+
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL 61

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII----EGIAQGLLYLHH 625
            G  +      ++ E  P  SL   L        L     I  +      IA G+ YL  
Sbjct: 62  YGVVLTHPLM-MVTELAPLGSLLDRLRKDALGHFL-----ISTLCDYAVQIANGMRYLE- 114

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            S+ R IHRDL A N+LL  D   KI DFGL R
Sbjct: 115 -SK-RFIHRDLAARNILLASDDKVKIGDFGLMR 145

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 81.9 bits (202), Expect = 3e-17
 Identities = 51/153 (33%), Positives = 87/153 (56%), Gaps = 10/153 (6%)

Query: 516 LGEGGFGPVYKGRL-LNGEE---VAVKRLSS-QSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG V++G L + G +   VA+K L    + +  ++F +E  ++ +  H N++R+ 
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G   +    ++I EYM N +LD +L D        +Q  +G++ GIA G+ YL   S   
Sbjct: 73  GVVTKFKPAMIITEYMENGALDKYLRD-HDGEFSSYQL-VGMLRGIAAGMKYL---SDMN 127

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
            +HRDL A N+L++ ++  K+SDFGL+R+   D
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|201524 pfam00954, S_locus_glycop, S-locus glycoprotein family

 Score = 77.3 bits (191), Expect = 3e-17
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 5/110 (4%)

Query: 213 TGEWTGDGFVSAL---SNTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQ 269
           +G W G  F         + ++Y     EN +E+ Y Y   N      L LS  G + R 
Sbjct: 3   SGPWNGIRFSGIPEMQKLSYYVYN--FTENNEEVYYTYRMTNNSIYSRLTLSSEGSLERF 60

Query: 270 LWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKS 319
            W  +S +W+  +S P D C  YG CG    C  +  P C C++GF  K+
Sbjct: 61  TWIPNSQDWNLFWSAPKDQCDVYGRCGPYGYCDVNTSPKCNCIKGFVPKN 110

In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. Length = 110

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 82.2 bits (204), Expect = 3e-17
 Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 22/159 (13%)

Query: 510 FSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN--EMLLIAKLQ-HRN 565
           + +  +LG+G FG VY  R    GE VA+K++  +     EE  N  E+  + KL  H N
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKMK-KKFYSWEECMNLREVKSLRKLNEHPN 59

Query: 566 LVRILGCCIEQGEKILILEYMPN------KSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           +V++     E  E   + EYM        K      F  +  R + +Q        I QG
Sbjct: 60  IVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQ--------ILQG 111

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           L ++H +  F   HRDLK  N+L+      KI+DFGLAR
Sbjct: 112 LAHIHKHGFF---HRDLKPENLLVSGPEVVKIADFGLAR 147

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 81.5 bits (201), Expect = 5e-17
 Identities = 51/154 (33%), Positives = 83/154 (53%), Gaps = 22/154 (14%)

Query: 516 LGEGGFGPVYKGRL-LNGEE---VAVKRLSS-QSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG V +GRL L G+    VA+K L S  + +   +F +E  ++ +  H N++ + 
Sbjct: 12  IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 571 GCCIEQGEKILILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           G   +    ++I E+M N +LD FL      F   +         +G++ GIA G+ YL 
Sbjct: 72  GVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQ--------LVGMLRGIAAGMKYL- 122

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             S    +HRDL A N+L++ ++  K+SDFGL+R
Sbjct: 123 --SEMNYVHRDLAARNILVNSNLVCKVSDFGLSR 154

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 81.8 bits (202), Expect = 6e-17
 Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 21/157 (13%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFK-NEMLLIAKLQHRNLVRILG 571
           K+GEG +G VYK R  +  E +A+K++   Q  +G+      E+ L+ ++QH N+VR+  
Sbjct: 9   KIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQD 68

Query: 572 CCIEQGEKILILEYMP---NKSLDV---FLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
               +    L+ EY+     K +D    F  +P   +   +Q    I+ GIA    Y H 
Sbjct: 69  VVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQ----ILRGIA----YCHS 120

Query: 626 YSRFRIIHRDLKASNVLLDRDMNP-KISDFGLARMFG 661
           +   R++HRDLK  N+L+DR  N  K++DFGLAR FG
Sbjct: 121 H---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154

Length = 294

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 81.0 bits (200), Expect = 6e-17
 Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 11/152 (7%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           LG+G +G VY  R L     +A+K +  +  + ++    E+ L + L+HRN+V+ LG   
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS 75

Query: 575 EQGEKILILEYMPNKSLDVFL---FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
           E G   + +E +P  SL   L   + P K      Q  I   + I +GL YLH     +I
Sbjct: 76  ENGFFKIFMEQVPGGSLSALLRSKWGPLKDN---EQTIIFYTKQILEGLKYLHDN---QI 129

Query: 632 IHRDLKASNVLLDRDMNP-KISDFGLARMFGG 662
           +HRD+K  NVL++      KISDFG ++   G
Sbjct: 130 VHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG 161

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 81.8 bits (202), Expect = 7e-17
 Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 12/150 (8%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---EMLLIAKLQHRNLVRIL 570
           ++G G FG VY  R +   E VA+K++S    Q  E++++   E+  + +L+H N +   
Sbjct: 22  EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYK 81

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG-IIEGIAQGLLYLHHYSRF 629
           GC + +    L++EY    + D+   +  KK L   +  I  I  G  QGL YLH + R 
Sbjct: 82  GCYLREHTAWLVMEYCLGSASDIL--EVHKKPL--QEVEIAAICHGALQGLAYLHSHER- 136

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARM 659
             IHRD+KA N+LL      K++DFG A +
Sbjct: 137 --IHRDIKAGNILLTEPGTVKLADFGSASL 164

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 81.2 bits (200), Expect = 7e-17
 Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 31/183 (16%)

Query: 512 MECKLGEGGFGPVYKGRLLN---GEE---VAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
           ME +LGE  FG VYKG L     GE+   VA+K L  ++   L EEFK+E ++ ++LQH 
Sbjct: 10  ME-ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHP 68

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLF-------------DPTKKRLLGWQARIG 611
           N+V +LG   ++    +I  Y  +  L  FL              D T K  L     + 
Sbjct: 69  NIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVH 128

Query: 612 IIEGIAQGLLYL--HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-MFGGD--ELQ 666
           I+  IA G+ +L  HH     ++H+DL   NVL+   +N KISD GL R ++  D  +L 
Sbjct: 129 IVTQIAAGMEFLSSHH-----VVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLM 183

Query: 667 GNT 669
           GN+
Sbjct: 184 GNS 186

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 81.0 bits (200), Expect = 7e-17
 Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 16/156 (10%)

Query: 516 LGEGGFGPVYKGRLLNGEE------VAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRNLVR 568
           LG G FG V+  +    EE      V VK L     + L+ EF+ E+ +  KL H+N+VR
Sbjct: 13  LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVR 72

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLY 622
           +LG C E     +ILEY     L  FL       +  K   L  + ++ +   IA G+ +
Sbjct: 73  LLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDH 132

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           L   S  R +HRDL A N L+      K+S   L++
Sbjct: 133 L---SNARFVHRDLAARNCLVSSQREVKVSLLSLSK 165

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 75.6 bits (186), Expect = 7e-17
 Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 11/92 (11%)

Query: 326 PIKCERSHSSECIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSN 385
           P+ C    S+     D F+KL ++K PD        +++L++C   CL NC+C AYA +N
Sbjct: 2   PLNCGGDGST-----DGFLKLPDVKLPDNASAI--TAISLEECREACLSNCSCTAYAYNN 54

Query: 386 VTEGSGCLMWFGELLDASRPIRNFTGQSVYLR 417
                GCL+W G L +      +  G ++YLR
Sbjct: 55  G--SGGCLLWNGLLNNLRSL--SSGGGTLYLR 82

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 81.0 bits (200), Expect = 9e-17
 Identities = 52/156 (33%), Positives = 86/156 (55%), Gaps = 8/156 (5%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRN 565
           NF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H N
Sbjct: 1   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 60

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H 
Sbjct: 61  IVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASPLSGIPLPLIKSYLFQLLQGLAFCHS 118

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 119 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 151

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 79.9 bits (198), Expect = 1e-16
 Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 14/165 (8%)

Query: 516 LGEGGFGPVYKGRLLNGEEV-AVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+G FG V   R  +  ++ A+K L  +     + +E    E  +++++ H  +V+ L 
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVK-LH 59

Query: 572 CCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
              +  EK+ L+LEY P   L   L    + R    +AR    E I   L YLH      
Sbjct: 60  YAFQTEEKLYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAE-IVLALEYLH---SLG 113

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           II+RDLK  N+LLD D + K++DFGLA+    +  + NT    GT
Sbjct: 114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT--FCGT 156

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 80.5 bits (199), Expect = 1e-16
 Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 32/184 (17%)

Query: 515 KLGEGGFGPVY------------KGRLLNGEE-----VAVKRL-SSQSGQGLEEFKNEML 556
           KLGEG FG V+            K    N        VAVK L    S    E+F  E+ 
Sbjct: 12  KLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVK 71

Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--------FDPTKKRLLGWQA 608
           ++++L   N+ R+LG C       +I+EYM N  L+ FL              + L +  
Sbjct: 72  ILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFST 131

Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-MFGGD--EL 665
            + +   IA G+ YL        +HRDL   N L+ ++   KI+DFG++R ++  D   +
Sbjct: 132 LLYMATQIASGMRYL---ESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRV 188

Query: 666 QGNT 669
           QG  
Sbjct: 189 QGRA 192

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 80.2 bits (198), Expect = 1e-16
 Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 31/161 (19%)

Query: 516 LGEGGFGPVYKG-RLLNGEEVAVK----------RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           +G+G +G VY    +  GE +AVK          R  S+    ++  ++E+  +  L H 
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68

Query: 565 NLVRILGCCIEQGEKIL--ILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
           N+V+ LG   E  E+ L   LEY+P  S+   L     F+    R    Q        + 
Sbjct: 69  NIVQYLGF--ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQ--------VL 118

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +GL YLH      I+HRDLKA N+L+D D   KISDFG+++
Sbjct: 119 EGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISK 156

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 80.2 bits (198), Expect = 2e-16
 Identities = 43/152 (28%), Positives = 83/152 (54%), Gaps = 6/152 (3%)

Query: 507 TENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
            + + +  +LG+G FG VYK +    G   A K +  +S + LE+F  E+ ++++ +H N
Sbjct: 4   NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPN 63

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V +      + +  +++E+    +LD  +    ++ L   Q R  +   + + L +LH 
Sbjct: 64  IVGLYEAYFYENKLWILIEFCDGGALDS-IMLELERGLTEPQIRY-VCRQMLEALNFLH- 120

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
               ++IHRDLKA N+LL  D + K++DFG++
Sbjct: 121 --SHKVIHRDLKAGNILLTLDGDVKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 79.8 bits (197), Expect = 2e-16
 Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 22/163 (13%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRN 565
           NF    KLGEG +  VYKGR    GE VA+K   L ++ G      + E+ L+ +L+H N
Sbjct: 1   NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIR-EISLMKELKHEN 59

Query: 566 LVRILGCCIEQGEKILILEYMPN---KSLDVF----LFDPTKKRLLGWQARIGIIEGIAQ 618
           +VR+      + + +L+ EYM     K +D        DP   +   +Q        + +
Sbjct: 60  IVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQ--------LLK 111

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           G+ + H     R++HRDLK  N+L+++    K++DFGLAR FG
Sbjct: 112 GIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFG 151

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 80.0 bits (198), Expect = 2e-16
 Identities = 51/157 (32%), Positives = 87/157 (55%), Gaps = 16/157 (10%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFK-NEMLLIAKLQ---HRNLVRI 569
           +GEG +G VYK R L  G  VA+K++    S +G+      E+ L+ +L+   H N+VR+
Sbjct: 7   IGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRL 66

Query: 570 LGCC-IEQGEKI----LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           L  C   + ++     L+ E++ ++ L  +L    K  L     +  ++  + +G+ +LH
Sbjct: 67  LDVCHGPRTDRELKLTLVFEHV-DQDLATYLSKCPKPGLPPETIK-DLMRQLLRGVDFLH 124

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   RI+HRDLK  N+L+  D   KI+DFGLAR++ 
Sbjct: 125 SH---RIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 79.6 bits (196), Expect = 2e-16
 Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 13/157 (8%)

Query: 516 LGEGGFGPV----YKGRLLN-GEEVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRI 569
           LGEG FG V    Y     N GE+VAVK L  +SG   + + K E+ ++  L H N+V+ 
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            G C E G     LI+E++P+ SL  +L  P  K  +  + ++     I +G+ YL   S
Sbjct: 72  KGICTEDGGNGIKLIMEFLPSGSLKEYL--PRNKNKINLKQQLKYAVQICKGMDYLG--S 127

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R + +HRDL A NVL++ +   KI DFGL +    D+
Sbjct: 128 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 79.2 bits (195), Expect = 2e-16
 Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 16/171 (9%)

Query: 509 NFSMECKLGEGGFGPVYKGRL-LNGEE---VAVKRLSS-QSGQGLEEFKNEMLLIAKLQH 563
              +E  +G G FG V  GRL L G+    VA+K L +  + +   +F +E  ++ +  H
Sbjct: 5   CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH 64

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI---GIIEGIAQGL 620
            N++ + G   +    +++ EYM N SLD FL     ++  G    I   G++ GIA G+
Sbjct: 65  PNIIHLEGVVTKSKPVMIVTEYMENGSLDAFL-----RKHDGQFTVIQLVGMLRGIASGM 119

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
            YL   S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 120 KYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTR 167

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 79.7 bits (196), Expect = 3e-16
 Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 21/162 (12%)

Query: 515 KLGEGGFGPVYKGR---LLNGEE---VAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           +LGEG FG V+      LL  ++   VAVK L   S    ++F+ E  L+  LQH+++VR
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRL----------LGWQARIGIIEGI 616
             G C E    +++ EYM +  L+ FL    P  K L          L     + I   I
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           A G++YL   +    +HRDL   N L+ + +  KI DFG++R
Sbjct: 132 ASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 170

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 78.8 bits (194), Expect = 3e-16
 Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 10/145 (6%)

Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
            +GEG FG V +G    G++VAVK +        + F  E  ++ KL H+NLVR+LG  +
Sbjct: 13  IIGEGEFGAVLQGEYT-GQKVAVKNIKCDVTA--QAFLEETAVMTKLHHKNLVRLLGVIL 69

Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI-GIIEGIAQGLLYLHHYSRFRIIH 633
             G  I ++E M   +L  FL   T+ R L    ++      +A+G+ YL      +++H
Sbjct: 70  HNGLYI-VMELMSKGNLVNFL--RTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVH 123

Query: 634 RDLKASNVLLDRDMNPKISDFGLAR 658
           RDL A N+L+  D   K+SDFGLAR
Sbjct: 124 RDLAARNILVSEDGVAKVSDFGLAR 148

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 78.5 bits (194), Expect = 4e-16
 Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 12/147 (8%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           ++G G +G VYK R +  GE VA+K +  + G   E  + E+ ++ + +H N+V   G  
Sbjct: 10  RIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY 69

Query: 574 IEQGEKILILEYMPNKSL-DVF--LFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           + + +  +++EY    SL D++     P  +  + +  R    E + +GL YLH      
Sbjct: 70  LRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCR----ETL-KGLAYLHE---TG 121

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLA 657
            IHRD+K +N+LL  D + K++DFG++
Sbjct: 122 KIHRDIKGANILLTEDGDVKLADFGVS 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 78.5 bits (194), Expect = 4e-16
 Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 16/151 (10%)

Query: 515 KLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKN---EMLLIAKLQHRNLVRIL 570
           +LG G  G V K      G+ +AVK +  +        K    E+ ++ K     +V   
Sbjct: 8   ELGAGNSGVVSKVLHRPTGKIMAVKTI--RLEINEAIQKQILRELDILHKCNSPYIVGFY 65

Query: 571 GCCIEQGEKILILEYMPNKSLDVFL---FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           G     G+  + +EYM   SLD  L        +R+LG      I   + +GL YLH   
Sbjct: 66  GAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILG-----KIAVAVLKGLTYLHE-- 118

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           + +IIHRD+K SN+L++     K+ DFG++ 
Sbjct: 119 KHKIIHRDVKPSNILVNSRGQIKLCDFGVSG 149

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 78.2 bits (193), Expect = 5e-16
 Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 7/172 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRN 565
           +++ +   +G G    VY    L N E+VA+KR+   +    ++E + E+  +++  H N
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPN 60

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V+     +   E  L++ Y+   SL   +     +  L       +++ + +GL YLH 
Sbjct: 61  VVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS 120

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF--GGDELQGNTKRIVGT 675
             +   IHRD+KA N+LL  D + KI+DFG++     GGD  +   K  VGT
Sbjct: 121 NGQ---IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGT 169

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 77.9 bits (192), Expect = 6e-16
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 16/151 (10%)

Query: 516 LGEGGFGPVY------KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG+G FG VY       GR L  ++V     S ++ + +   + E+ L+  LQH  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            GC  +     + +EYMP  S+   L  +    + +     R      I +G+ YLH   
Sbjct: 70  YGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTR-----QILEGVEYLH--- 121

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              I+HRD+K +N+L D   N K+ DFG ++
Sbjct: 122 SNMIVHRDIKGANILRDSAGNVKLGDFGASK 152

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 78.2 bits (192), Expect = 6e-16
 Identities = 54/166 (32%), Positives = 90/166 (54%), Gaps = 24/166 (14%)

Query: 516 LGEGGFGPVYKGRLLNGE---EVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           LGEG FG V +G+L   +   +VAVK  +++  +   +E+F +E + + +  H N++R++
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 571 GCCIEQGEK------ILILEYMPNKSLDVFLFDPTKKRL------LGWQARIGIIEGIAQ 618
           G C++  E       ++IL +M +  L  FL      RL      L  Q  +  +  IA 
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLL---YSRLGDCPQYLPTQMLVKFMTDIAS 123

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA-RMFGGD 663
           G+ YL   S    IHRDL A N +L+ +MN  ++DFGL+ +++ GD
Sbjct: 124 GMEYL---SSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGD 166

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 77.8 bits (191), Expect = 8e-16
 Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 6/157 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 6   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 64

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     E+   I + EYM   SL  FL     K L   Q  + +   IA G+ Y+    
Sbjct: 65  QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVE--- 119

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 120 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 77.1 bits (190), Expect = 1e-15
 Identities = 50/153 (32%), Positives = 85/153 (55%), Gaps = 19/153 (12%)

Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRIL 570
           +G+G FG VY G L++ +      AVK L+  +  + +E+F  E +++    H N++ +L
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 571 GCCI-EQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+      PT K L+G+  ++      A+G+ YL  
Sbjct: 63  GICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQV------AKGMEYL-- 114

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 115 -ASKKFVHRDLAARNCMLDESFTVKVADFGLAR 146

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 77.5 bits (191), Expect = 1e-15
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 40/180 (22%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRL-SSQSGQGLEEFKNEMLLIAK 560
           +  ++   LGEG FG V K   +          VAVK L    + + L +  +EM ++  
Sbjct: 12  DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKM 71

Query: 561 L-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--------------PTKKRL-- 603
           + +H+N++ +LG C ++G   +++EY  + +L  FL                P ++ L  
Sbjct: 72  IGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQ 131

Query: 604 -----LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                  +Q        +A+G+ +L   S+ + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 132 KDLVSFAYQ--------VARGMEFLA--SK-KCIHRDLAARNVLVTEDHVMKIADFGLAR 180

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 77.4 bits (190), Expect = 1e-15
 Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 29/171 (16%)

Query: 509 NFSMECKLGEGGFGPVYKGRLLN--GEE----VAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
           N  ++ +LGEG FG V+     N   E+    VAVK L   S    ++F  E  L+  LQ
Sbjct: 6   NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 65

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLF-------------DPTKKRLLGWQAR 609
           H ++V+  G C+E    I++ EYM +  L+ FL               P +   L     
Sbjct: 66  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAE---LTQSQM 122

Query: 610 IGIIEGIAQGLLYL--HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           + I + IA G++YL   H+     +HRDL   N L+  ++  KI DFG++R
Sbjct: 123 LHIAQQIAAGMVYLASQHF-----VHRDLATRNCLVGENLLVKIGDFGMSR 168

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 77.5 bits (191), Expect = 1e-15
 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 18/158 (11%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLE-EFKNEMLLIAKLQHRN 565
           E      +LGEG  G V K RL N   + A+K +++     L+ +   E+ +    +   
Sbjct: 1   EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY 60

Query: 566 LVRILGCCIE--QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG------IIEGIA 617
           +V+  G  ++       + +EY    SLD        K++     RIG      I E + 
Sbjct: 61  IVKYYGAFLDESSSSIGIAMEYCEGGSLDSIY-----KKVKKRGGRIGEKVLGKIAESVL 115

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           +GL YLH  SR +IIHRD+K SN+LL R    K+ DFG
Sbjct: 116 KGLSYLH--SR-KIIHRDIKPSNILLTRKGQVKLCDFG 150

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 77.0 bits (189), Expect = 1e-15
 Identities = 54/159 (33%), Positives = 81/159 (50%), Gaps = 6/159 (3%)

Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
             E+  +  KLG G FG V+ G      +VAVK L   +    E F  E  ++ KL+H  
Sbjct: 4   PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDK 62

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           LV++     E+   I + EYM   SL  FL D  + R L     + +   +A G+ Y+  
Sbjct: 63  LVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKD-GEGRALKLPNLVDMAAQVAAGMAYIE- 119

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             R   IHRDL+++N+L+   +  KI+DFGLAR+   +E
Sbjct: 120 --RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 77.7 bits (192), Expect = 2e-15
 Identities = 50/173 (28%), Positives = 83/173 (47%), Gaps = 34/173 (19%)

Query: 510 FSMECKLGEGGFGPVYKGRLLN---GEEVAVKRL--SSQSGQGLEEFK-NEMLLIAKLQH 563
           + +E  +G G +G VYK +  N   G+E A+K+     +   G+ +    E+ L+ +L+H
Sbjct: 2   YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61

Query: 564 RNLVRILGCCIEQGEKI--LILEYMPNKSLDVFLF----------DPTKKRLLGWQARIG 611
            N+V ++   +E  +K   L+ +Y  +    +  F              K LL WQ    
Sbjct: 62  ENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLL-WQ---- 116

Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP----KISDFGLARMF 660
               I  G+ YLH  S + ++HRDLK +N+L+  +       KI D GLAR+F
Sbjct: 117 ----ILNGVHYLH--SNW-VLHRDLKPANILVMGEGPERGVVKIGDLGLARLF 162

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 76.9 bits (189), Expect = 2e-15
 Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 26/164 (15%)

Query: 516 LGEGGFGPVYKGRLL-NGEE----VAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG V+KG  +  G+     VA+K +  +SG Q  +E  + ML +  L H  +VR+
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 570 LGCCIEQGEKI-LILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLY 622
           LG C   G  + L+ +  P  SL   +       DP  +RLL W  +I      A+G+ Y
Sbjct: 75  LGIC--PGASLQLVTQLSPLGSLLDHVRQHRDSLDP--QRLLNWCVQI------AKGMYY 124

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
           L  +   R++HR+L A N+LL  D   +I+DFG+A +   D+ +
Sbjct: 125 LEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKK 165

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 77.0 bits (189), Expect = 2e-15
 Identities = 48/144 (33%), Positives = 83/144 (57%), Gaps = 6/144 (4%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           +LG+G FG VYK +    G   A K + ++S + LE++  E+ ++A   H  +V++LG  
Sbjct: 19  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF 78

Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
              G+  +++E+ P  ++D  + +   + L   Q ++ I   + + L YLH     +IIH
Sbjct: 79  YWDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQV-ICRQMLEALQYLH---SMKIIH 133

Query: 634 RDLKASNVLLDRDMNPKISDFGLA 657
           RDLKA NVLL  D + K++DFG++
Sbjct: 134 RDLKAGNVLLTLDGDIKLADFGVS 157

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 76.1 bits (187), Expect = 2e-15
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 6/150 (4%)

Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           +LG G FG V  G+     +VA+K +   S    +EF  E  ++ KL H  LV++ G C 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT 69

Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +Q    ++ EYM N  L  +L +   KR    Q  + + + + +G+ YL      + IHR
Sbjct: 70  KQRPIYIVTEYMSNGCLLNYLRE-HGKRFQPSQL-LEMCKDVCEGMAYLESK---QFIHR 124

Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           DL A N L+D     K+SDFGL+R    DE
Sbjct: 125 DLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 76.2 bits (188), Expect = 3e-15
 Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 31/172 (18%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLS--SQSGQGLEEFKNEMLLIA 559
           E  ++  +LG+G FG VY+G             VA+K ++  +   + +E F NE  ++ 
Sbjct: 6   EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIE-FLNEASVMK 64

Query: 560 KLQHRNLVRILGCCIEQGEKILILEYM-------------PNKSLDVFLFDPTKKRLLGW 606
           +    ++VR+LG        ++++E M             P    +  L  PT ++ +  
Sbjct: 65  EFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQM 124

Query: 607 QARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            A I      A G+ YL      + +HRDL A N ++  D+  KI DFG+ R
Sbjct: 125 AAEI------ADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTR 167

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 76.2 bits (187), Expect = 4e-15
 Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 10/149 (6%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           ++G G FG VY  R + N E VA+K++S    QS +  ++   E+  + KL+H N ++  
Sbjct: 22  EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           GC + +    L++EY    + D+       K+ L       +  G  QGL YLH ++   
Sbjct: 82  GCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 135

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARM 659
           +IHRD+KA N+LL      K+ DFG A +
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASI 164

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 75.8 bits (187), Expect = 4e-15
 Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 23/161 (14%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN----EMLLIAKLQ 562
             + +   +GEG +G V K R    GE VA+K+         E+ K     E+ ++ +L+
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD--EDVKKTALREVKVLRQLR 58

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
           H N+V +      +G   L+ EY+    L++         P   R   WQ        + 
Sbjct: 59  HENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQ--------LL 110

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           Q + Y H      IIHRD+K  N+L+      K+ DFG AR
Sbjct: 111 QAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFAR 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 75.5 bits (186), Expect = 5e-15
 Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 16/169 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNG-----EEVAVKRLSSQSGQ-GLEEFKNEMLLIAKL 561
           +  ++   L EG FG ++ G L++      EEV VK +   + +  +     E  L+  L
Sbjct: 6   DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL 65

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKS-LDVFLFDP-----TKKRLLGWQARIGIIEG 615
            H+N++ IL  CIE GE   +L    N   L +FL           + L  Q  + +   
Sbjct: 66  SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQ 125

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-MFGGD 663
           IA G+ YLH   +  +IH+D+ A N ++D ++  KI+D  L+R +F  D
Sbjct: 126 IACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMD 171

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 74.9 bits (184), Expect = 6e-15
 Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 6/150 (4%)

Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           +LG G FG V+ G+     +VA+K ++ +     E+F  E  ++ KL H  LV++ G C 
Sbjct: 11  ELGSGQFGVVHLGKWRAQIKVAIKAIN-EGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCT 69

Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +Q    ++ E+M N  L  +L    ++  L     + + + + +G+ YL    R   IHR
Sbjct: 70  QQKPLYIVTEFMENGCLLNYLRQ--RQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHR 124

Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           DL A N L+      K+SDFG+ R    DE
Sbjct: 125 DLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 75.4 bits (185), Expect = 9e-15
 Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 12/155 (7%)

Query: 516 LGEGGFGPVYKGRLL-NGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+    VA+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 15  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 74

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 75  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEER--- 128

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G DE
Sbjct: 129 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 75.0 bits (184), Expect = 1e-14
 Identities = 58/174 (33%), Positives = 88/174 (50%), Gaps = 26/174 (14%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE--------VAVKRLSSQ-SGQGLEEFKNEMLLI 558
           +   +   LGEG FG V +      ++        VAVK L    + + L +  +EM L+
Sbjct: 12  DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELM 71

Query: 559 AKL-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLL 604
             + +H+N++ +LG C ++G   +I+EY    +L  FL           FD TK  +  L
Sbjct: 72  KLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQL 131

Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            ++  +     +A+G+ YL   SR R IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 132 SFKDLVSCAYQVARGMEYLE--SR-RCIHRDLAARNVLVTEDNVMKIADFGLAR 182

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 74.7 bits (183), Expect = 1e-14
 Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 10/149 (6%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---EMLLIAKLQHRNLVRIL 570
           ++G G FG VY  R +   E VA+K++S    Q  E++++   E+  + +++H N +   
Sbjct: 32  EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYK 91

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           GC + +    L++EY    + D  L +  KK L   +    I  G  QGL YLH ++   
Sbjct: 92  GCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEI-AAITHGALQGLAYLHSHN--- 145

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARM 659
           +IHRD+KA N+LL      K++DFG A +
Sbjct: 146 MIHRDIKAGNILLTEPGQVKLADFGSASI 174

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 74.4 bits (183), Expect = 1e-14
 Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 21/156 (13%)

Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRLSSQS-GQGLEEFK-NEMLLIAKLQHRNLVRILG 571
           K+GEG +G V+K +     E VA+KR+      +G+      E+ L+ +L+H+N+VR+  
Sbjct: 7   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYD 66

Query: 572 CCIEQGEKILILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
                 +  L+ EY  ++ L  +        DP   +   +Q        + +GL + H 
Sbjct: 67  VLHSDKKLTLVFEYC-DQDLKKYFDSCNGDIDPEIVKSFMFQ--------LLKGLAFCHS 117

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           +    ++HRDLK  N+L++++   K++DFGLAR FG
Sbjct: 118 H---NVLHRDLKPQNLLINKNGELKLADFGLARAFG 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 73.6 bits (181), Expect = 2e-14
 Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 10/174 (5%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQ 562
             NF +E K+G+G F  VYK   LL+G  VA+K++        +  ++   E+ L+ +L 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTK-KRLLGWQARIGIIEGIAQGLL 621
           H N+++ L   IE  E  ++LE      L   +    K KRL+  +        +   L 
Sbjct: 61  HPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALE 120

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           ++H  S+ RI+HRD+K +NV +      K+ D GL R F       ++   VGT
Sbjct: 121 HMH--SK-RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSL--VGT 169

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 73.9 bits (182), Expect = 2e-14
 Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 27/175 (15%)

Query: 516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCC 573
           +GEG +G VYK R    G+ VA+K +        EE K E  ++ K   H N+    G  
Sbjct: 14  IGEGTYGKVYKARHKKTGQLVAIKIMDII-EDEEEEIKEEYNILRKYSNHPNIATFYGAF 72

Query: 574 IEQGEKI------LILEYMPNKSL-DVFLFDPTKKRLLGWQARIG------IIEGIAQGL 620
           I++          L++E     S+ D+       K L     R+       I+    +GL
Sbjct: 73  IKKNPPGNDDQLWLVMELCGGGSVTDLV------KGLRKKGKRLKEEWIAYILRETLRGL 126

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            YLH     ++IHRD+K  N+LL ++   K+ DFG++        + NT   +GT
Sbjct: 127 AYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNT--FIGT 176

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 73.2 bits (179), Expect = 2e-14
 Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 6/157 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  ++ KLG+G FG V+ G      +VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 6   ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLV 64

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +     E+   I + E+M   SL  FL +   K L   Q  + +   IA G+ Y+    
Sbjct: 65  PLYAVVSEEPIYI-VTEFMGKGSLLDFLKEGDGKYLKLPQL-VDMAAQIADGMAYIE--- 119

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   IHRDL+A+N+L+  ++  KI+DFGLAR+   +E
Sbjct: 120 RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 73.9 bits (181), Expect = 3e-14
 Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 21/161 (13%)

Query: 516 LGEGGFGPVYKGRLLNG---EEVAVKRLSSQSGQG-LEEFKNEMLLIAKL-QHRNLVRIL 570
           +GEG FG V K R+       + A+KR+   + +    +F  E+ ++ KL  H N++ +L
Sbjct: 15  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 74

Query: 571 GCCIEQGEKILILEYMPNKSLDVFL-------FDP------TKKRLLGWQARIGIIEGIA 617
           G C  +G   L +EY P+ +L  FL        DP      +    L  Q  +     +A
Sbjct: 75  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 134

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +G+ YL   S+ + IHRDL A N+L+  +   KI+DFGL+R
Sbjct: 135 RGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 172

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 73.0 bits (180), Expect = 3e-14
 Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 9/150 (6%)

Query: 510 FSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRNLV 567
           F++   +G+G FG VYK       + VA+K +   ++   +E+ + E+  +++ +   + 
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           +  G  ++  +  +I+EY    S      D  K   L       I+  +  GL YLH   
Sbjct: 63  KYYGSFLKGSKLWIIMEYCGGGSC----LDLLKPGKLDETYIAFILREVLLGLEYLH--- 115

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
               IHRD+KA+N+LL  + + K++DFG++
Sbjct: 116 EEGKIHRDIKAANILLSEEGDVKLADFGVS 145

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 73.0 bits (180), Expect = 3e-14
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 25/175 (14%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK-----NEMLLIAKL 561
           ++F     +GEG F  V   +     +E A+K L  +  Q ++E K      E  ++ +L
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKR--QLIKEKKVKYVKIEKEVLTRL 58

Query: 562 -QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEG 615
             H  ++++     ++     +LEY PN  L  ++      D    R             
Sbjct: 59  NGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRF--------YAAE 110

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTK 670
           I   L YLH  S+  IIHRDLK  N+LLD+DM+ KI+DFG A++   +    + K
Sbjct: 111 ILLALEYLH--SK-GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNK 162

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 73.2 bits (180), Expect = 4e-14
 Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 25/161 (15%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKR-LSSQSGQG-----LEEFKNEMLLIAKLQHRNLV 567
           K+G+G FG V+K R     + VA+K+ L     +G     L E K    ++  L+H N+V
Sbjct: 19  KIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIK----ILQLLKHENVV 74

Query: 568 RILGCCIEQGEK--------ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
            ++  C  +            L+ E+  +  L   L +   K  L    ++  ++ +  G
Sbjct: 75  NLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKV--MKMLLNG 131

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           L Y+H   R +I+HRD+KA+N+L+ +D   K++DFGLAR F
Sbjct: 132 LYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAF 169

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 72.4 bits (178), Expect = 4e-14
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 29/158 (18%)

Query: 515 KLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQG--LEEFKNEMLLIAKLQHRNLVRILG 571
           K+G G FG VY    L  GE +AVK +  Q      ++E  +EM ++  L+H NLV+  G
Sbjct: 7   KIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYG 66

Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG----------IAQGLL 621
             + + +  + +EY    +L+  L               G I            + +GL 
Sbjct: 67  VEVHREKVYIFMEYCSGGTLEELL-------------EHGRILDEHVIRVYTLQLLEGLA 113

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
           YLH +    I+HRD+K +N+ LD +   K+ DFG A  
Sbjct: 114 YLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVK 148

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 72.7 bits (178), Expect = 5e-14
 Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 26/165 (15%)

Query: 515 KLGEGGFGPVYKGRLLNGEE------VAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           +LGEG FG V+     N         VAVK L   +    ++F+ E  L+  LQH ++V+
Sbjct: 12  ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 71

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRL-----------LGWQARIGIIEG 615
             G C +    I++ EYM +  L+ FL    P    L           LG    + I   
Sbjct: 72  FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 131

Query: 616 IAQGLLYL--HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           IA G++YL   H+     +HRDL   N L+  ++  KI DFG++R
Sbjct: 132 IASGMVYLASQHF-----VHRDLATRNCLVGANLLVKIGDFGMSR 171

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 71.6 bits (175), Expect = 9e-14
 Identities = 48/144 (33%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRNLVRILGCCI 574
           LG+G FG V+KG L +   VAVK       Q L+ +F +E  ++ +  H N+V+++G C 
Sbjct: 3   LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCT 62

Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           ++    +++E +P    D   F   KK  L  +  +      A G+ YL   +    IHR
Sbjct: 63  QRQPIYIVMELVPGG--DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN---CIHR 117

Query: 635 DLKASNVLLDRDMNPKISDFGLAR 658
           DL A N L+  +   KISDFG++R
Sbjct: 118 DLAARNCLVGENNVLKISDFGMSR 141

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 72.0 bits (176), Expect = 9e-14
 Identities = 57/164 (34%), Positives = 81/164 (49%), Gaps = 23/164 (14%)

Query: 515 KLGEGGFGPVYKGRL-LNGEE----VAVKRLSS-QSGQGLEEFKNEMLLIAKLQHRNLVR 568
           +LGE  FG +YKG L L G +    VA+K L    + Q   EF+ E  L+A+L H N+V 
Sbjct: 12  ELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC 71

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFLF--------------DPTKKRLLGWQARIGIIE 614
           +LG   ++    ++ EY+    L  FL               D T K  L     + I  
Sbjct: 72  LLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAI 131

Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            IA G+ YL   S F  +H+DL A N+L+   ++ KISD GL+R
Sbjct: 132 QIAAGMEYLS--SHF-FVHKDLAARNILIGEQLHVKISDLGLSR 172

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 70.7 bits (173), Expect = 2e-13
 Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 16/151 (10%)

Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGL------EEFKNEMLLIAKLQHRNLVRI 569
           LG+G +G VY G    G+ +AVK++   +   L      E+ + E+ L+  L+H N+V+ 
Sbjct: 8   LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQY 67

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           LG C++     + +E++P  S+   L  F P  + +     +  I++G+A    YLH+  
Sbjct: 68  LGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTK-QILDGVA----YLHNNC 122

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              ++HRD+K +NV+L  +   K+ DFG AR
Sbjct: 123 ---VVHRDIKGNNVMLMPNGIIKLIDFGCAR 150

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 71.1 bits (174), Expect = 2e-13
 Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 40/190 (21%)

Query: 515 KLGEGGFGPVYKGRLLNGEE-----------------VAVKRLSSQSGQGLE-EFKNEML 556
           KLGEG FG V+   ++N ++                 VAVK L   + +    +F  E+ 
Sbjct: 12  KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVK 71

Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--------------FDPTKKR 602
           ++++L+  N++R+LG C+++    +I EYM N  L+ FL                P    
Sbjct: 72  ILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHC 131

Query: 603 LL--GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-M 659
           L    + + + +   IA G+ YL   S    +HRDL   N L+  ++  KI+DFG++R +
Sbjct: 132 LPAISYSSLLHVALQIASGMKYL---SSLNFVHRDLATRNCLVGENLTIKIADFGMSRNL 188

Query: 660 FGGD--ELQG 667
           + GD   +QG
Sbjct: 189 YAGDYYRIQG 198

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 70.8 bits (173), Expect = 2e-13
 Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 31/178 (17%)

Query: 509 NFSMECKLGEGGFGPVYKGRL--LNG----EEVAVKRLSSQSGQG-LEEFKNEMLLIAKL 561
           N  +   LGEG FG V K     L G      VAVK L   +    L +  +E  L+ ++
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV 60

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTK--------------------- 600
            H +++++ G C + G  +LI+EY    SL  FL +  K                     
Sbjct: 61  NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPD 120

Query: 601 KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +R L     I     I++G+ YL   +  +++HRDL A NVL+      KISDFGL+R
Sbjct: 121 ERALTMGDLISFAWQISRGMQYL---AEMKLVHRDLAARNVLVAEGRKMKISDFGLSR 175

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 70.4 bits (172), Expect = 2e-13
 Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 16/162 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG G FG V+        +VAVK +   S   +E F  E  ++  LQH  LV
Sbjct: 6   ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 64

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKR-----LLGWQARIGIIEGIAQGLLY 622
           + L   + +    +I E+M   SL  FL      +     L+ + A+I      A+G+ +
Sbjct: 65  K-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI------AEGMAF 117

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           +   +    IHRDL+A+N+L+   +  KI+DFGLAR+   +E
Sbjct: 118 IEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 70.5 bits (172), Expect = 2e-13
 Identities = 43/153 (28%), Positives = 85/153 (55%), Gaps = 11/153 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
           E+F +  ++G G +G VYK R +N GE  A+K +  + G+     + E++++   +H N+
Sbjct: 9   EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNI 68

Query: 567 VRILGCCIEQGEKILILEYMPNKSL-DVF-LFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           V   G  + + +  + +E+    SL D++ +  P  +  + + +R  +     QGL YLH
Sbjct: 69  VAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETL-----QGLYYLH 123

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
              +   +HRD+K +N+LL  + + K++DFG++
Sbjct: 124 SKGK---MHRDIKGANILLTDNGHVKLADFGVS 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 70.5 bits (173), Expect = 3e-13
 Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 15/154 (9%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRL---SSQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           ++GEG +G VY+ R   +GE VA+K++   + + G  +   + E+ L+  L+H N+V + 
Sbjct: 14  RIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLR-EITLLLNLRHPNIVELK 72

Query: 571 GCCI-EQGEKI-LILEYMPNKSLDVF-LFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              + +  + I L++EY      D+  L D         Q +  ++  + +GL YLH   
Sbjct: 73  EVVVGKHLDSIFLVMEYCEQ---DLASLLDNMPTPFSESQVK-CLMLQLLRGLQYLHE-- 126

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            F IIHRDLK SN+LL      KI+DFGLAR +G
Sbjct: 127 NF-IIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 70.4 bits (172), Expect = 3e-13
 Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 31/181 (17%)

Query: 515 KLGEGGFGPVYKGRLLNGEE---------------VAVKRLSSQ-SGQGLEEFKNEMLLI 558
           KLGEG FG V+        E               VAVK L +  +     +F  E+ ++
Sbjct: 12  KLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIM 71

Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE---- 614
           ++L++ N++R+LG C+      +I EYM N  L+ FL     +        I  +     
Sbjct: 72  SRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANL 131

Query: 615 -----GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-MFGGD--ELQ 666
                 IA G+ YL   +    +HRDL   N L+      KI+DFG++R ++ GD   +Q
Sbjct: 132 LYMAVQIASGMKYL---ASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQ 188

Query: 667 G 667
           G
Sbjct: 189 G 189

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 69.7 bits (170), Expect = 4e-13
 Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 24/156 (15%)

Query: 516 LGEGGFGPVY------KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG+G FG VY       GR L  ++V     S ++ + +   + E+ L+  LQH  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69

Query: 570 LGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKRLLGWQARIGII-----EGIAQGLLY 622
            GC  ++ EK L   +EYMP  S+        K +L  + A    +       I +G+ Y
Sbjct: 70  YGCLRDRAEKTLTIFMEYMPGGSV--------KDQLKAYGALTESVTRKYTRQILEGMSY 121

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           LH      I+HRD+K +N+L D   N K+ DFG ++
Sbjct: 122 LHSN---MIVHRDIKGANILRDSAGNVKLGDFGASK 154

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 69.9 bits (171), Expect = 5e-13
 Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 32/182 (17%)

Query: 515 KLGEGGFGPVYKGRLLNGEE-----------------VAVKRLSSQSGQGLE-EFKNEML 556
           KLGEG FG V+       E+                 VAVK L   + +    +F  E+ 
Sbjct: 12  KLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIK 71

Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--------FDPTKKRLLGWQA 608
           ++++L+  N++R+L  CI      +I EYM N  L+ FL         +      + +  
Sbjct: 72  IMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYST 131

Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-MFGGD--EL 665
            I +   IA G+ YL   S    +HRDL   N L+ ++   KI+DFG++R ++ GD   +
Sbjct: 132 LIFMATQIASGMKYL---SSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRI 188

Query: 666 QG 667
           QG
Sbjct: 189 QG 190

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 69.2 bits (169), Expect = 5e-13
 Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 8/156 (5%)

Query: 504 AAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH 563
           A   +   +   +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H
Sbjct: 2   ALNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRH 58

Query: 564 RNLVRILGCCIEQ-GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
            NLV++LG  +E+ G   ++ EYM   SL  +L     + +LG    +     + + + Y
Sbjct: 59  SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEY 117

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           L   +    +HRDL A NVL+  D   K+SDFGL +
Sbjct: 118 LEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTK 150

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 69.7 bits (170), Expect = 7e-13
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 515 KLGEGGFGPVY-KGRLLNGEEVAVKRLSSQSGQGLEEFKN---EMLLIAKLQHRNLVRIL 570
           ++G G FG VY        E VAVK++S    Q  E++++   E+  + +L+H N +   
Sbjct: 28  EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK 87

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           GC +++    L++EY    + D+       K+ L       I  G  QGL YLH ++   
Sbjct: 88  GCYLKEHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAITHGALQGLAYLHSHN--- 141

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLA 657
           +IHRD+KA N+LL      K++DFG A
Sbjct: 142 MIHRDIKAGNILLTEPGQVKLADFGSA 168

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 68.8 bits (168), Expect = 1e-12
 Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 25/173 (14%)

Query: 510 FSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQH 563
           F++   LG+G FG V + +L     + ++VAVK L +   S   +EEF  E   + +  H
Sbjct: 1   FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH 60

Query: 564 RNLVRILGCCIEQGEK------ILILEYMPNKSLDVFLFDPTKKRL------LGWQARIG 611
            N+++++G  +    K      ++IL +M +  L  FL      R+      L  Q  + 
Sbjct: 61  PNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLL---MSRIGEEPFTLPLQTLVR 117

Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-MFGGD 663
            +  IA G+ YL   S    IHRDL A N +L+ +M   ++DFGL++ ++ GD
Sbjct: 118 FMIDIASGMEYL---SSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGD 167

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 68.6 bits (168), Expect = 1e-12
 Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 20/168 (11%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQG-LEEFKNEMLLIAKLQH---RNLVRIL 570
           +G G +G VY+G+ +  G  VA+K ++  +    + + + E+ L+++L+     N+ +  
Sbjct: 9   IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYY 68

Query: 571 GCCIEQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           G  ++     +I+EY    S+   +   P  ++ +       II  +   L Y+H     
Sbjct: 69  GSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISV-----IIREVLVALKYIHKVG-- 121

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRI--VGT 675
            +IHRD+KA+N+L+    N K+ DFG+A +      Q ++KR   VGT
Sbjct: 122 -VIHRDIKAANILVTNTGNVKLCDFGVAALLN----QNSSKRSTFVGT 164

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 68.8 bits (169), Expect = 1e-12
 Identities = 59/174 (33%), Positives = 88/174 (50%), Gaps = 39/174 (22%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL---SSQSG---QGLEEFKNEMLLIAK 560
           + +    ++ EG +G VY+ R    GE VA+K+L     + G     L E    +LL  K
Sbjct: 5   DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREI--NILL--K 60

Query: 561 LQHRNLVRI----LGCCIEQGEKI-LILEYMPN--KSL-----DVFLFDPTKKRLLGWQA 608
           LQH N+V +    +G  ++   KI +++EY+ +  KSL       FL    K  +L  Q 
Sbjct: 61  LQHPNIVTVKEVVVGSNLD---KIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLML--Q- 114

Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG 662
              ++ G+A    +LH      I+HRDLK SN+LL+     KI DFGLAR +G 
Sbjct: 115 ---LLSGVA----HLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 13/164 (7%)

Query: 515 KLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRILGC 572
           ++G+G FG VYKG     +EV A+K +  +  +  +E+ + E+ ++++     + R  G 
Sbjct: 11  RIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGS 70

Query: 573 CIEQGEKILILEYMPNKS-LDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
            ++  +  +I+EY+   S LD+    P ++  +       I+  I +GL YLH     R 
Sbjct: 71  YLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHSE---RK 122

Query: 632 IHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           IHRD+KA+NVLL    + K++DFG+A      +++ NT   VGT
Sbjct: 123 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGT 164

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 12/157 (7%)

Query: 516 LGEGGFGPVYKGRLL-NGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  + +GE     VA+K L  + S +  +E  +E  ++A +    + R+
Sbjct: 15  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + L+ + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 75  LGICLTSTVQ-LVTQLMPYGCLLDYVRE--NKDRIGSQDLLNWCVQIAKGMSYLEE---V 128

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
           R++HRDL A NVL+    + KI+DFGLAR+   DE +
Sbjct: 129 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 165

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 67.6 bits (165), Expect = 2e-12
 Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 8/150 (5%)

Query: 516 LGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEF--KNEMLLIAKLQHRNLVRILGC 572
           +G G FG V+  R    +  V +K++  +     E    +NE  ++  L H N++     
Sbjct: 8   VGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYEN 67

Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
            +E    ++++EY P  +L  ++    +KR         I+    Q LL LHH     I+
Sbjct: 68  FLEDKALMIVMEYAPGGTLAEYI----QKRCNSLLDEDTILHFFVQILLALHHVHTKLIL 123

Query: 633 HRDLKASNVLLDR-DMNPKISDFGLARMFG 661
           HRDLK  N+LLD+  M  KI DFG++++  
Sbjct: 124 HRDLKTQNILLDKHKMVVKIGDFGISKILS 153

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 67.7 bits (166), Expect = 2e-12
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 32/180 (17%)

Query: 515 KLGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLEEFKNEML-----LIAKLQHRNLV- 567
            +G+G FG V K  R  +G+ +  K +   +   + E + + L     ++ +L+H N+V 
Sbjct: 7   TIGKGSFGTVRKVRRKSDGKILVWKEIDYGN---MTEKEKQQLVSEVNILRELKHPNIVR 63

Query: 568 ---RILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIG---IIEGIAQGL 620
              RI+       + + +++EY     L   +    K+R       I    I   + Q L
Sbjct: 64  YYDRII---DRSNQTLYIVMEYCEGGDLAQLIQKCKKERK-----YIEEEFIWRILTQLL 115

Query: 621 LYLHH-----YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           L L+           ++HRDLK +N+ LD + N K+ DFGLA++ G D      K  VGT
Sbjct: 116 LALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHD--SSFAKTYVGT 173

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 45/146 (30%), Positives = 82/146 (56%), Gaps = 10/146 (6%)

Query: 515 KLGEGGFGPVYKGRLLNGEE---VAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           +LG+G FG VYK +  N E     A K + ++S + LE++  E+ ++A   H N+V++L 
Sbjct: 12  ELGDGAFGKVYKAQ--NKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 69

Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
               +    +++E+    ++D  + +  ++ L   Q R+ + +   + L YLH     +I
Sbjct: 70  AFYYENNLWILIEFCAGGAVDAVMLE-LERPLTEPQIRV-VCKQTLEALNYLHEN---KI 124

Query: 632 IHRDLKASNVLLDRDMNPKISDFGLA 657
           IHRDLKA N+L   D + K++DFG++
Sbjct: 125 IHRDLKAGNILFTLDGDIKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 67.5 bits (165), Expect = 2e-12
 Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 21/162 (12%)

Query: 509 NFSMECKLGEGGFGPVYK-GRLLNGEEVAVKR--LSSQSGQGLEEFKNEMLLIAKLQHRN 565
           +F +  KLG+G +G VYK  RL + +  A+K   L S S +  E+  NE+ ++A + H N
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 566 LVR-----ILGC--CIEQGEKILILEYMPNKSLDVFLFDPTK-KRLLGWQARIGIIEGIA 617
           ++      + G   CI       ++EY P   L   +    K ++L+  Q    I   + 
Sbjct: 61  IISYKEAFLDGNKLCI-------VMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLL 113

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
           +GL  LH     +I+HRDLK++N+LL  +   KI D G++++
Sbjct: 114 RGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKV 152

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 25/171 (14%)

Query: 508 ENFSMECKLGEGGFGPVYK------GRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL 561
           E+   E  +GEG FG V +      G  +N     +K  +S++     +F  E+ ++ KL
Sbjct: 2   EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDH--RDFAGELEVLCKL 59

Query: 562 -QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-------FDPTKKR------LLGWQ 607
             H N++ +LG C  +G   + +EY P  +L  FL        DP   +       L  Q
Sbjct: 60  GHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQ 119

Query: 608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             +     +A G+ YL   S  + IHRDL A NVL+  ++  KI+DFGL+R
Sbjct: 120 QLLQFASDVATGMQYL---SEKQFIHRDLAARNVLVGENLASKIADFGLSR 167

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 68.4 bits (168), Expect = 2e-12
 Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 20/176 (11%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL-----SSQSGQGLEEFKNEMLLIAKL 561
             + +  KLG+G +G V+K       E VA+K++     ++   Q    F+  M L    
Sbjct: 7   RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQ--RTFREIMFLQELG 64

Query: 562 QHRNLVRILGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
            H N+V++L     + +K   L+ EYM     +  L    +  +L    +  I+  + + 
Sbjct: 65  DHPNIVKLLNVIKAENDKDIYLVFEYM-----ETDLHAVIRANILEDVHKRYIMYQLLKA 119

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           L Y+H  S   +IHRDLK SN+LL+ D   K++DFGLAR     EL+ N +  V T
Sbjct: 120 LKYIH--SG-NVIHRDLKPSNILLNSDCRVKLADFGLARSL--SELEENPENPVLT 170

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 67.7 bits (165), Expect = 3e-12
 Identities = 52/166 (31%), Positives = 86/166 (51%), Gaps = 26/166 (15%)

Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L S + +  L +  +EM ++  + +H+N
Sbjct: 26  LGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 85

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L           ++PT+  +  L ++  +  
Sbjct: 86  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSC 145

Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 146 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 188

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 67.0 bits (163), Expect = 3e-12
 Identities = 44/153 (28%), Positives = 81/153 (52%), Gaps = 11/153 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
            ++ +  ++G G +G VYK R L  GE  AVK +  + G      + E+ ++ + +H N+
Sbjct: 9   HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNI 68

Query: 567 VRILGCCIEQGEKILILEYMPNKSL-DVF-LFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           V   G  + + +  + +EY    SL D++ +  P  +  + +  R  +     QGL YLH
Sbjct: 69  VAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETL-----QGLAYLH 123

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
              +   +HRD+K +N+LL  + + K++DFG+A
Sbjct: 124 SKGK---MHRDIKGANILLTDNGDVKLADFGVA 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 67.3 bits (164), Expect = 3e-12
 Identities = 57/164 (34%), Positives = 86/164 (52%), Gaps = 25/164 (15%)

Query: 505 AATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFK--NEMLLIAKL 561
           AAT   ++E KLGEG +  VYKG   +NG+ VA+K +S ++ +G+  F    E  L+  L
Sbjct: 3   AATSYLNLE-KLGEGSYATVYKGISRINGQLVALKVISMKTEEGVP-FTAIREASLLKGL 60

Query: 562 QHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIE 614
           +H N+V +L   I   E +  + EYM +  L  ++        P   RL  +Q       
Sbjct: 61  KHANIV-LLHDIIHTKETLTFVFEYM-HTDLAQYMIQHPGGLHPYNVRLFMFQ------- 111

Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            + +GL Y+H      I+HRDLK  N+L+      K++DFGLAR
Sbjct: 112 -LLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 67.5 bits (165), Expect = 4e-12
 Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 40/180 (22%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQG------------------LEEFKNEML 556
           LGEG +G V K    L G+ VA+K++                         L E K    
Sbjct: 17  LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELK---- 72

Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPN---KSLD--VFLFDPTKKRLLGWQARIG 611
           ++ +++H N++ ++   +E     L+++ M +   K +D  + L +   K +L  Q    
Sbjct: 73  IMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCIL-LQ---- 127

Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
               I  GL  LH +     +HRDL  +N+ ++     KI+DFGLAR +G         +
Sbjct: 128 ----ILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSK 180

Length = 335

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 67.1 bits (164), Expect = 4e-12
 Identities = 49/179 (27%), Positives = 89/179 (49%), Gaps = 23/179 (12%)

Query: 510 FSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFK----NEMLLIAKLQHR 564
           F +  ++GEG +G VYK R    GE VA+K++   + +  E F      E+ ++ +L HR
Sbjct: 9   FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK--EGFPITAIREIKILRQLNHR 66

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGW----------QARIGIIE 614
           N+V +     +   K   L++  +K     +F+     L+G                 ++
Sbjct: 67  NIVNLKEIVTD---KQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMK 123

Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
            + +GL Y H  +    +HRD+K SN+LL+     K++DFGLAR++  +E +  T +++
Sbjct: 124 QLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVI 179

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 66.6 bits (163), Expect = 6e-12
 Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 24/155 (15%)

Query: 514 CKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
            KLGEG +  VYKGR  L G+ VA+K  RL  + G      + E  L+  L+H N+V  L
Sbjct: 11  DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIR-EASLLKDLKHANIV-TL 68

Query: 571 GCCIEQGEKI-LILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLYL 623
              I   + + L+ EY+ +  L  ++            RL  +Q        + +GL Y 
Sbjct: 69  HDIIHTKKTLTLVFEYL-DTDLKQYMDDCGGGLSMHNVRLFLFQ--------LLRGLAYC 119

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           H     R++HRDLK  N+L+      K++DFGLAR
Sbjct: 120 HQR---RVLHRDLKPQNLLISERGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 65.8 bits (160), Expect = 6e-12
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 16/157 (10%)

Query: 515 KLGEGGFGPVYKG--RLLNGEE-VAVKRLSSQSGQGLEEFKNEMLLIAK----LQHRNLV 567
           +LG G FG V KG  ++   E+ VAVK L + +       K+E+L  A     L +  +V
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNND--PALKDELLREANVMQQLDNPYIV 59

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R++G C E    +L++E      L+ FL    K + +  +    ++  ++ G+ YL   +
Sbjct: 60  RMIGIC-EAESWMLVMELAELGPLNKFL---QKNKHVTEKNITELVHQVSMGMKYLEETN 115

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               +HRDL A NVLL      KISDFGL++  G DE
Sbjct: 116 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADE 149

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 65.4 bits (159), Expect = 9e-12
 Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 24/162 (14%)

Query: 509 NFSMECKLGEGGFGPVY--KGRLLNGEEVAVKR--LSSQSGQGLEEFKNEMLLIAKLQHR 564
            + +  K+GEG FG +Y  K +  + E   +K   L+    +  E  K E++L+AK++H 
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDS-EHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHP 59

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL-------DVFLFDPTKKRLLGWQARIGIIEGIA 617
           N+V       E G   +++EY     L          LF  ++ ++L W  +I +     
Sbjct: 60  NIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLF--SEDQILSWFVQISL----- 112

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLAR 658
            GL ++H     +I+HRD+K+ N+ L ++ M  K+ DFG+AR
Sbjct: 113 -GLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIAR 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 65.5 bits (159), Expect = 1e-11
 Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 13/167 (7%)

Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCI 574
           +G G +G VYKGR +   ++A  ++   +G   EE K E+ ++ K   HRN+    G  I
Sbjct: 14  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 73

Query: 575 EQG------EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
           ++       +  L++E+    S+   L   TK   L  +    I   I +GL +LH +  
Sbjct: 74  KKNPPGMDDQLWLVMEFCGAGSV-TDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-- 130

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            ++IHRD+K  NVLL  +   K+ DFG++     D   G     +GT
Sbjct: 131 -KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGT 174

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 65.0 bits (158), Expect = 1e-11
 Identities = 48/154 (31%), Positives = 83/154 (53%), Gaps = 10/154 (6%)

Query: 515 KLGEGGFGPVYKG--RLLNGE-EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +LG G FG V KG  ++   + +VA+K L +++ + + +E   E  ++ +L +  +VR++
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMI 61

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G C E    +L++E      L+ FL    KK  +     + ++  ++ G+ YL   +   
Sbjct: 62  GVC-EAEALMLVMEMASGGPLNKFL--SGKKDEITVSNVVELMHQVSMGMKYLEGKN--- 115

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            +HRDL A NVLL      KISDFGL++  G D+
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDFGLSKALGADD 149

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 65.3 bits (159), Expect = 1e-11
 Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 21/155 (13%)

Query: 515 KLGEGGFGPVYKG---RLLNGEEVAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           ++G G FG V  G   R ++   V VK L +S +      F  E+    +L H N+++ L
Sbjct: 2   EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCL 61

Query: 571 GCCIEQGEKILILEYMPNKSLDVFL--------FDPTKKRLLGWQARIGIIEGIAQGLLY 622
           G CIE    +L+LE+ P   L  +L            K  L      +      A GLL+
Sbjct: 62  GQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEV------ASGLLW 115

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
           LH   +   IH DL   N  L  D++ KI D+GLA
Sbjct: 116 LH---QADFIHSDLALRNCQLTADLSVKIGDYGLA 147

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 64.7 bits (157), Expect = 2e-11
 Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 25/182 (13%)

Query: 508 ENFSMECKLGEGGFGPVY------KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL 561
            N+ +   LG G FG VY       GR L  ++V     S ++ + +   + E+ L+  L
Sbjct: 2   VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL 61

Query: 562 QHRNLVRILGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKRLLGWQARIGII-----E 614
           +H  +V+  GC  +  EK L   +EYMP  S+        K +L  + A    +      
Sbjct: 62  RHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSI--------KDQLKAYGALTENVTRRYTR 113

Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGN-TKRIV 673
            I QG+ YLH      I+HRD+K +N+L D   N K+ DFG ++      + G   K + 
Sbjct: 114 QILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVT 170

Query: 674 GT 675
           GT
Sbjct: 171 GT 172

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 65.0 bits (158), Expect = 2e-11
 Identities = 51/149 (34%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 515 KLGEGGFGPVYKGRL---LNGEEVAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           ++G G FG V  G +       +V VK L  S S Q   +F  E      LQH NL++ L
Sbjct: 2   EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCL 61

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI--GIIEGIAQGLLYLHHYSR 628
           G C E    +L++E+ P   L  +L    K  L+         +   IA GLL+LH   +
Sbjct: 62  GQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---K 118

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLA 657
              IH DL   N LL  D+  KI D+GL+
Sbjct: 119 NNFIHSDLALRNCLLTADLTVKIGDYGLS 147

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 64.9 bits (158), Expect = 2e-11
 Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 10/180 (5%)

Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFKNEM 555
           L ++ SV    + ++   K+G+G  G VY    +  G+EVA+K+++ Q     E   NE+
Sbjct: 8   LRTIVSVGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEI 67

Query: 556 LLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
           L++ + +H N+V  L   +   E  +++EY+   SL     D   +  +       +   
Sbjct: 68  LVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 123

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             Q L +LH     ++IHRD+K+ N+LL  D + K++DFG       ++ + +T  +VGT
Sbjct: 124 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 178

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 64.8 bits (158), Expect = 2e-11
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 11/149 (7%)

Query: 515 KLGEGGFGPVYKG--RLLNGEE--VAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRI 569
            +GEG FG VY+G       E+  VAVK   + +   + E+F  E  ++ +  H ++V++
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G   E    I ++E  P   L  +L     K  L   + I     ++  L YL   S+ 
Sbjct: 73  IGVITENPVWI-VMELAPLGELRSYL--QVNKYSLDLASLILYSYQLSTALAYLE--SK- 126

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           R +HRD+ A NVL+      K+ DFGL+R
Sbjct: 127 RFVHRDIAARNVLVSSPDCVKLGDFGLSR 155

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 64.7 bits (157), Expect = 2e-11
 Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 18/176 (10%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQHR 564
           NF +E K+G G F  VY+   LL+ + VA+K++        +  ++   E+ L+ +L H 
Sbjct: 3   NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLD-VFLFDPTKKRLLG----WQARIGIIEGIAQG 619
           N+++ L   IE  E  ++LE      L  +  +   +KRL+     W+  + +   +   
Sbjct: 63  NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVE-- 120

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
               H +SR R++HRD+K +NV +      K+ D GL R F       ++  +VGT
Sbjct: 121 ----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGT 169

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 64.7 bits (157), Expect = 2e-11
 Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 10/180 (5%)

Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEM 555
           L ++ S+    + ++   K+G+G  G V+    +  G+EVA+K+++ Q     E   NE+
Sbjct: 8   LRTIVSIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEI 67

Query: 556 LLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
           L++ +L++ N+V  L   +   E  +++EY+   SL     D   +  +       +   
Sbjct: 68  LVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLT----DVVTETCMDEAQIAAVCRE 123

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             Q L +LH     ++IHRD+K+ NVLL  D + K++DFG       ++ + +T  +VGT
Sbjct: 124 CLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 178

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 64.7 bits (157), Expect = 2e-11
 Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 10/180 (5%)

Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFKNEM 555
           L S+ SV    + ++   K+G+G  G VY    +  G+EVA+K+++ Q     E   NE+
Sbjct: 8   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEI 67

Query: 556 LLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
           L++ + ++ N+V  L   +   E  +++EY+   SL     D   +  +       +   
Sbjct: 68  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 123

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             Q L +LH     ++IHRD+K+ N+LL  D + K++DFG       ++ + +T  +VGT
Sbjct: 124 CLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 178

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 64.0 bits (156), Expect = 3e-11
 Identities = 42/166 (25%), Positives = 81/166 (48%), Gaps = 15/166 (9%)

Query: 516 LGEGGFGP--VYK----GRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG+G FG   +Y+      L+  +EV + RLS +      +  NE+++++ LQH N++  
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEK---ERRDALNEIVILSLLQHPNIIAY 64

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               ++    ++ +EY    +L   +    K +L   +  +  +  I   + Y+H     
Sbjct: 65  YNHFMDDNTLLIEMEYANGGTLYDKIVR-QKGQLFEEEMVLWYLFQIVSAVSYIHKAG-- 121

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            I+HRD+K  N+ L +    K+ DFG++++ G +     T  +VGT
Sbjct: 122 -ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET--VVGT 164

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 64.7 bits (157), Expect = 4e-11
 Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 26/166 (15%)

Query: 516 LGEGGFGPVY--------KGRLLNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V         K +      VAVK L    + + L +  +EM ++  + +H+N
Sbjct: 20  LGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKN 79

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +++EY    +L  +L           FD  K  +  L ++  +  
Sbjct: 80  IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSC 139

Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 140 AYQVARGMEYL---ASQKCIHRDLAARNVLVTEDNVMKIADFGLAR 182

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 63.9 bits (155), Expect = 4e-11
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 25/163 (15%)

Query: 516 LGEGGFGPVYK------GRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVR 568
           +GEG FG V K      G  ++     +K  +S+      +F  E+ ++ KL  H N++ 
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNIIN 60

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFL-------FDPTKKRLLGWQARIG------IIEG 615
           +LG C  +G   L +EY P+ +L  FL        DP         + +           
Sbjct: 61  LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +A+G+ YL   S+ + IHRDL A N+L+  +   KI+DFGL+R
Sbjct: 121 VARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 160

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 63.9 bits (155), Expect = 4e-11
 Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 25/174 (14%)

Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRL-----SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG+G FG VY     + G E+AVK++     S ++ + +   + E+ L+  L H  +V+ 
Sbjct: 10  LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69

Query: 570 LGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKRLLGWQARIGII-----EGIAQGLLY 622
            GC  +  E+ L   +E+MP  S+        K +L  + A    +       I +G+ Y
Sbjct: 70  YGCLRDPMERTLSIFMEHMPGGSI--------KDQLKSYGALTENVTRKYTRQILEGVSY 121

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGN-TKRIVGT 675
           LH      I+HRD+K +N+L D   N K+ DFG ++      L G   K + GT
Sbjct: 122 LHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGT 172

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 63.9 bits (155), Expect = 4e-11
 Identities = 45/158 (28%), Positives = 84/158 (53%), Gaps = 17/158 (10%)

Query: 515 KLGEGGFGPVYKGRLLN--GEEVAVKRL---SSQSGQGLEEFKNEMLL--IAKLQHRNLV 567
           ++GEG +G V+K R L   G  VA+KR+   + + G  L   +   +L  +   +H N+V
Sbjct: 8   EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 67

Query: 568 RILGCCI-----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           R+   C       + +  L+ E++ ++ L  +L D   +  +  +    ++  + +GL +
Sbjct: 68  RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 125

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           LH +   R++HRDLK  N+L+      K++DFGLAR++
Sbjct: 126 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 160

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 64.3 bits (157), Expect = 5e-11
 Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 10/152 (6%)

Query: 510 FSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFK---NEMLLIAKLQHRN 565
           F +  ++G+GG+G V+  +  + GE VA+KR+       L E +    E  ++   +   
Sbjct: 3   FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEW 62

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           LV++L    +     L +EY+P       L       L    AR  + E     +  LH 
Sbjct: 63  LVKLLYAFQDDEYLYLAMEYVPGGDFRTLL--NNLGVLSEDHARFYMAEMFE-AVDALH- 118

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
                 IHRDLK  N L+D   + K++DFGL+
Sbjct: 119 --ELGYIHRDLKPENFLIDASGHIKLTDFGLS 148

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 63.5 bits (154), Expect = 5e-11
 Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 7/146 (4%)

Query: 515 KLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRNLVRILGC 572
           ++G G FG V+ GRL  +   VAVK         L+ +F  E  ++ +  H N+VR++G 
Sbjct: 2   RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 61

Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
           C ++    +++E +       FL   T+   L  +  I ++E  A G+ YL        I
Sbjct: 62  CTQKQPIYIVMELVQGGDFLTFL--RTEGPRLKVKELIQMVENAAAGMEYLESKH---CI 116

Query: 633 HRDLKASNVLLDRDMNPKISDFGLAR 658
           HRDL A N L+      KISDFG++R
Sbjct: 117 HRDLAARNCLVTEKNVLKISDFGMSR 142

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 64.0 bits (155), Expect = 5e-11
 Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 10/180 (5%)

Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEM 555
           L S+ SV    + ++   K+G+G  G VY    +  G+EVA+++++ Q     E   NE+
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68

Query: 556 LLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
           L++ + ++ N+V  L   +   E  +++EY+   SL     D   +  +       +   
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             Q L +LH     ++IHRD+K+ N+LL  D + K++DFG       +  Q     +VGT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGT 179

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 63.5 bits (154), Expect = 6e-11
 Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 10/162 (6%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           K+GEG  G V   R   +G +VAVK +  +  Q  E   NE++++   QH+N+V +    
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY 87

Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
           +   E  +++E++   +L     D   +  L  +    + E + Q L YLH      +IH
Sbjct: 88  LVGEELWVLMEFLQGGALT----DIVSQTRLNEEQIATVCESVLQALCYLHSQG---VIH 140

Query: 634 RDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           RD+K+ ++LL  D   K+SDFG       D  +   K +VGT
Sbjct: 141 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK--RKSLVGT 180

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 63.7 bits (156), Expect = 7e-11
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 45/172 (26%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---------EMLLIAKLQHRN 565
           +G G +G V        G +VA+K++S         F +         E+ L+  L+H N
Sbjct: 8   IGSGAYGVVCSAVDKRTGRKVAIKKIS-------NVFDDLIDAKRILREIKLLRHLRHEN 60

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLD----VF-LFDPTKKRLLGWQARIGIIEGIAQ-- 618
           ++ +L           IL     +  +    V  L +    +++  ++   + +   Q  
Sbjct: 61  IIGLL----------DILRPPSPEDFNDVYIVTELMETDLHKVI--KSPQPLTDDHIQYF 108

Query: 619 ------GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 GL YLH      +IHRDLK SN+L++ + + KI DFGLAR    DE
Sbjct: 109 LYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 63.3 bits (155), Expect = 7e-11
 Identities = 53/167 (31%), Positives = 76/167 (45%), Gaps = 21/167 (12%)

Query: 516 LGEGGFGPVYKGRLLNGEEV-AVKRLSSQ----SGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           LG G FG V   R     +  A+K LS        Q +E   NE  ++  ++H  LV + 
Sbjct: 9   LGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQ-VEHVLNEKRILQSIRHPFLVNLY 67

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKK--RLLGWQARIGIIEGIAQGLLYLHHYSR 628
           G   +     L++EY+P   L    F   +K  R     AR    + +   L YLH    
Sbjct: 68  GSFQDDSNLYLVMEYVPGGEL----FSHLRKSGRFPEPVARFYAAQ-VVLALEYLHSLD- 121

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             I++RDLK  N+LLD D   KI+DFG A+      ++G T  + GT
Sbjct: 122 --IVYRDLKPENLLLDSDGYIKITDFGFAK-----RVKGRTYTLCGT 161

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 63.2 bits (154), Expect = 8e-11
 Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 10/143 (6%)

Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           K+GEG  G V      + G +VAVK++  +  Q  E   NE++++   QH N+V +    
Sbjct: 26  KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSY 85

Query: 574 IEQGEKILILEYMPNKSL-DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
           +   E  +++E++   +L D+     T  R+   Q    +   + + L +LH      +I
Sbjct: 86  LVGDELWVVMEFLEGGALTDIV----THTRMNEEQIAT-VCLAVLKALSFLHAQ---GVI 137

Query: 633 HRDLKASNVLLDRDMNPKISDFG 655
           HRD+K+ ++LL  D   K+SDFG
Sbjct: 138 HRDIKSDSILLTSDGRVKLSDFG 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 63.5 bits (155), Expect = 1e-10
 Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 33/161 (20%)

Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKN---EMLLIAKLQHRNLVRILG 571
           +G G +G V        G +VA+K+LS +  Q     K    E+ L+  + H N++ +L 
Sbjct: 23  VGSGAYGQVCSAFDTKTGRKVAIKKLS-RPFQSAIHAKRTYRELRLLKHMDHENVIGLLD 81

Query: 572 CCIEQGEKILILEYMPNKSL----DVFLFDP---------TKKRLLGWQARIGIIEGIAQ 618
                        + P  SL    DV+L             K + L       ++  I +
Sbjct: 82  V------------FTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILR 129

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
           GL Y+H      IIHRDLK SN+ ++ D   KI DFGLAR 
Sbjct: 130 GLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARH 167

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 49/166 (29%), Positives = 82/166 (49%), Gaps = 26/166 (15%)

Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     L  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 23  LGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 82

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L           +D  +     + ++  +  
Sbjct: 83  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSC 142

Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 143 TYQVARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 185

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 62.3 bits (151), Expect = 2e-10
 Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 10/147 (6%)

Query: 515 KLGEGGFGPVYKGRL-LNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           KLGEG +  VYKGR  L    VA+K  RL  + G      + E+ L+  L+H N+V +  
Sbjct: 13  KLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLHD 71

Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
               +    L+ EY+ +K L  +L D     +     ++ + + + +GL Y H   R ++
Sbjct: 72  IIHTEKSLTLVFEYL-DKDLKQYL-DDCGNSINMHNVKLFLFQ-LLRGLNYCH---RRKV 125

Query: 632 IHRDLKASNVLLDRDMNPKISDFGLAR 658
           +HRDLK  N+L++     K++DFGLAR
Sbjct: 126 LHRDLKPQNLLINERGELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 62.1 bits (151), Expect = 2e-10
 Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 13/151 (8%)

Query: 514 CKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKNEMLLIAKLQHR-----NLV 567
            +LG G +G V K R +    + AVKR+ +      +E K  +L+   +  R       V
Sbjct: 7   EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS--QEQK-RLLMDLDISMRSVDCPYTV 63

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE-GIAQGLLYLHHY 626
              G    +G+  + +E M + SLD F      K L   +  +G I   I + L YLH  
Sbjct: 64  TFYGALFREGDVWICMEVM-DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH-- 120

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
           S+  +IHRD+K SNVL++R+   K+ DFG++
Sbjct: 121 SKLSVIHRDVKPSNVLINRNGQVKLCDFGIS 151

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 62.1 bits (151), Expect = 3e-10
 Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 24/170 (14%)

Query: 500 LASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN----- 553
             +V   T  +     +G G FG V   R  L G+ VA+K++       ++ F       
Sbjct: 2   FGTVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKI-------MKPFSTPVLAK 54

Query: 554 ----EMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
               E+ L+  L+H N++ +    I   E I  +  +    L   L      R L  Q  
Sbjct: 55  RTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLGTDLHRLL----TSRPLEKQFI 110

Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
              +  I +GL Y+H      ++HRDLK SN+L++ + + KI DFGLAR+
Sbjct: 111 QYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI 157

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 61.1 bits (148), Expect = 3e-10
 Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 13/161 (8%)

Query: 510 FSMECKLGEGGFGPVY---KGRLLNGEEVAV-KRLSSQSGQGLEEFKN--EMLLIAKLQH 563
           + ++ +LG+G FG VY     + +  E + V K +        E  +   E  L++KL H
Sbjct: 2   YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH 61

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLGWQARIGIIEGIAQGLL 621
             +V+     +E+    +I EY   + LD  L     T K L   Q    + E   Q LL
Sbjct: 62  PAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQ----VCEWFIQLLL 117

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG 662
            +H+  + RI+HRDLKA N+ L  ++  KI DFG++R+  G
Sbjct: 118 GVHYMHQRRILHRDLKAKNIFLKNNL-LKIGDFGVSRLLMG 157

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 61.5 bits (149), Expect = 3e-10
 Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 17/158 (10%)

Query: 515 KLGEGGFGPVYKG---RLLNGE---EVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG+G FG VY+G    ++ GE    VAVK ++ S S +   EF NE  ++      ++V
Sbjct: 13  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 72

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLF-------DPTKKRLLGWQARIGIIEGIAQGL 620
           R+LG   +    ++++E M +  L  +L        +   +     Q  I +   IA G+
Sbjct: 73  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 132

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 133 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 167

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 61.1 bits (149), Expect = 3e-10
 Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 18/153 (11%)

Query: 514 CKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN--EMLLIAKLQ-HRNLVRI 569
            K+GEG F  V K +    G+  A+K +  +  + LE+  N  E+  + +L  H N++R+
Sbjct: 5   GKIGEGTFSEVLKAQSRKTGKYYAIKCMK-KHFKSLEQVNNLREIQALRRLSPHPNILRL 63

Query: 570 LGCCIEQ--GEKILILEYMPNKSLDVFLFDPTK--KRLLGWQARIGIIEGIAQGLLYLHH 625
           +    ++  G   L+ E M     D+ L++  K  KR L  + R+     + Q L  L H
Sbjct: 64  IEVLFDRKTGRLALVFELM-----DMNLYELIKGRKRPLP-EKRVKSY--MYQLLKSLDH 115

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             R  I HRD+K  N+L+  D   K++DFG  R
Sbjct: 116 MHRNGIFHRDIKPENILIKDD-ILKLADFGSCR 147

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 61.3 bits (149), Expect = 4e-10
 Identities = 52/159 (32%), Positives = 74/159 (46%), Gaps = 12/159 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRL--LNGEE----VAVKRLSSQSGQGLEE-FKNEMLLIAK 560
            N S    LG G FG V +     L+  +    VAVK L   +     E   +E+ +++ 
Sbjct: 35  NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH 94

Query: 561 L-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           L  H N+V +LG C   G  ++I EY     L  FL    ++  L  +  +     +A+G
Sbjct: 95  LGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFL-RRKRESFLTLEDLLSFSYQVAKG 153

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           + +L   +    IHRDL A NVLL      KI DFGLAR
Sbjct: 154 MAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR 189

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 60.7 bits (148), Expect = 4e-10
 Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 30/174 (17%)

Query: 519 GGFGPVYKGR-LLNGEEVAVKRLSSQSGQG---LEEFKNEMLLIAKLQHRNLVRILGCCI 574
           G +G V+  +    G+  A+K +          +++   E  ++++ Q   +V++     
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLY-YSF 62

Query: 575 EQGEKILIL--EYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            QG+K L L  EY+P   L   L      D          ARI I E I   L YLH   
Sbjct: 63  -QGKKNLYLVMEYLPGGDLASLLENVGSLDED-------VARIYIAE-IVLALEYLH--- 110

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLA------RMFGGDELQGNTKRIVGT 675
              IIHRDLK  N+L+D + + K++DFGL+      R    ++ +   KRIVGT
Sbjct: 111 SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGT 164

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 61.2 bits (148), Expect = 4e-10
 Identities = 49/147 (33%), Positives = 77/147 (52%), Gaps = 10/147 (6%)

Query: 515 KLGEGGFGPVYKGRL-LNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           KLGEG +  V+KGR  L    VA+K  RL  + G      + E+ L+  L+H N+V +  
Sbjct: 13  KLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLHD 71

Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
                    L+ EY+ +K L  ++ D     +     +I + + I +GL Y H   R ++
Sbjct: 72  IVHTDKSLTLVFEYL-DKDLKQYM-DDCGNIMSMHNVKIFLYQ-ILRGLAYCH---RRKV 125

Query: 632 IHRDLKASNVLLDRDMNPKISDFGLAR 658
           +HRDLK  N+L++     K++DFGLAR
Sbjct: 126 LHRDLKPQNLLINERGELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 60.8 bits (147), Expect = 4e-10
 Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 18/176 (10%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSS---QSGQGLEEFKNEMLLIAKLQHR 564
           NF +E K+G G F  VY+   LL+G  VA+K++        +   +   E+ L+ +L H 
Sbjct: 3   NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLL-----GWQARIGIIEGIAQG 619
           N+++     IE  E  ++LE      L   +    K++ L      W+  + +   +   
Sbjct: 63  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALE-- 120

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
               H +SR R++HRD+K +NV +      K+ D GL R F       ++  +VGT
Sbjct: 121 ----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGT 169

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 60.4 bits (146), Expect = 6e-10
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 10/147 (6%)

Query: 515 KLGEGGFGPVYKGRL-LNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           KLGEG +  V+KGR  L    VA+K  RL  + G      + E+ L+  L+H N+V +  
Sbjct: 12  KLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIR-EVSLLKNLKHANIVTLHD 70

Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
               +    L+ EY+ +  L  +L D     +     +I + + + +GL Y H     +I
Sbjct: 71  IIHTERCLTLVFEYLDS-DLKQYL-DNCGNLMSMHNVKIFMFQ-LLRGLSYCHKR---KI 124

Query: 632 IHRDLKASNVLLDRDMNPKISDFGLAR 658
           +HRDLK  N+L++     K++DFGLAR
Sbjct: 125 LHRDLKPQNLLINEKGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 60.5 bits (147), Expect = 7e-10
 Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 21/160 (13%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKR-LSSQSGQGLEEFK-NEMLLIAKLQHR 564
           E +     +GEG +G V K +    G+ VA+K+ L S+  + +++    E+ ++ +L+H 
Sbjct: 1   EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHE 60

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP------TKKRLLGWQARIGIIEGIAQ 618
           NLV ++     +    L+ E++ +  LD     P        ++ L +Q    I+ GI  
Sbjct: 61  NLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYL-FQ----ILRGIE- 114

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              + H ++   IIHRD+K  N+L+ +    K+ DFG AR
Sbjct: 115 ---FCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFAR 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 59.9 bits (145), Expect = 8e-10
 Identities = 48/150 (32%), Positives = 76/150 (50%), Gaps = 10/150 (6%)

Query: 511 SMECKLGEGGFGPVYKGRL-LNGEE---VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRN 565
            +E  LG G FG + +G L L  +    VA+  L +  S +    F  E L + +  H N
Sbjct: 8   KIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSN 67

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +VR+ G        +++ EYM N +LD FL    + +L+  Q  +G++ G+A G+ YL  
Sbjct: 68  IVRLEGVITRGNTMMIVTEYMSNGALDSFL-RKHEGQLVAGQL-MGMLPGLASGMKYL-- 123

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
            S    +H+ L A  VL++ D+  KIS F 
Sbjct: 124 -SEMGYVHKGLAAHKVLVNSDLVCKISGFR 152

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 60.1 bits (145), Expect = 8e-10
 Identities = 48/171 (28%), Positives = 92/171 (53%), Gaps = 13/171 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQG-LEEFKNEMLLIAKLQHRN 565
           E F+   ++G+G FG V+KG     ++V A+K +  +  +  +E+ + E+ ++++     
Sbjct: 4   ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 63

Query: 566 LVRILGCCIEQGEKILILEYMPNKS-LDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           + +  G  ++  +  +I+EY+   S LD+    P  +  +       +++ I +GL YLH
Sbjct: 64  VTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIA-----TMLKEILKGLDYLH 118

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              +   IHRD+KA+NVLL    + K++DFG+A      +++ NT   VGT
Sbjct: 119 SEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGT 164

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 59.6 bits (144), Expect = 1e-09
 Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 13/167 (7%)

Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCI 574
           +G G +G VYKGR +   ++A  ++   +    EE K E+ ++ K   HRN+    G  I
Sbjct: 24  VGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFI 83

Query: 575 EQG------EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
           ++       +  L++E+    S+   L   TK   L       I   I +GL +LH +  
Sbjct: 84  KKSPPGHDDQLWLVMEFCGAGSV-TDLVKNTKGNALKEDWIAYICREILRGLAHLHAH-- 140

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            ++IHRD+K  NVLL  +   K+ DFG++     D   G     +GT
Sbjct: 141 -KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGT 184

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 59.7 bits (144), Expect = 1e-09
 Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 13/171 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQG-LEEFKNEMLLIAKLQHRN 565
           E F+   K+G+G FG V+KG     ++V A+K +  +  +  +E+ + E+ ++++     
Sbjct: 4   ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 63

Query: 566 LVRILGCCIEQGEKILILEYMPNKS-LDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           + +  G  ++  +  +I+EY+   S LD+    P  +  +       I+  I +GL YLH
Sbjct: 64  VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLH 118

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              +   IHRD+KA+NVLL      K++DFG+A      +++ N    VGT
Sbjct: 119 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN--TFVGT 164

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 59.8 bits (145), Expect = 1e-09
 Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 15/172 (8%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE-VAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           ++      +G G FG V+  R    E   A+K ++       +  +   NE  ++ ++ H
Sbjct: 1   DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH 60

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
             ++R+     +Q    +++EY+P   L  F +     R           E I   L YL
Sbjct: 61  PFIIRLFWTEHDQRFLYMLMEYVPGGEL--FSYLRNSGRFSNSTGLFYASE-IVCALEYL 117

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H      I++RDLK  N+LLD++ + K++DFG A+     +L+  T  + GT
Sbjct: 118 HSKE---IVYRDLKPENILLDKEGHIKLTDFGFAK-----KLRDRTWTLCGT 161

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 59.3 bits (143), Expect = 1e-09
 Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 29/173 (16%)

Query: 506 ATENFSMECKLGEGGFGPVY----KGRLLNGEE--VAVKRLS-SQSGQGLEEFKNEMLLI 558
           A E  +M  +LG+G FG VY    KG + +  E  VA+K ++ + S +   EF NE  ++
Sbjct: 4   AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 63

Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD-------------PTKKRLLG 605
            +    ++VR+LG   +    ++I+E M    L  +L               P+ K++  
Sbjct: 64  KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKM-- 121

Query: 606 WQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
               I +   IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 122 ----IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 167

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 59.3 bits (143), Expect = 2e-09
 Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 24/154 (15%)

Query: 515 KLGEGGFGPVYKGRL-LNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           KLGEG +  VYKG+  +NG+ VA+K  RL  + G      + E  L+  L+H N+V +L 
Sbjct: 12  KLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIR-EASLLKGLKHANIV-LLH 69

Query: 572 CCIEQGEKI-LILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
             I   E + L+ EY+ +  L  ++        P   +L  +Q        + +GL Y+H
Sbjct: 70  DIIHTKETLTLVFEYV-HTDLCQYMDKHPGGLHPENVKLFLFQ--------LLRGLSYIH 120

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              R+ I+HRDLK  N+L+      K++DFGLAR
Sbjct: 121 Q--RY-ILHRDLKPQNLLISDTGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 59.2 bits (143), Expect = 2e-09
 Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 16/157 (10%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQ-GLE-EFKNEMLLIAKLQ---HRNLVR 568
           ++G G +G VYK R   +G  VA+K +  Q+ + GL      E+ L+ +L+   H N+VR
Sbjct: 7   EIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVR 66

Query: 569 ILGCC----IEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
           ++  C     ++  K+ L+ E++ ++ L  +L D      L  +    ++    +GL +L
Sbjct: 67  LMDVCATSRTDRETKVTLVFEHV-DQDLRTYL-DKVPPPGLPAETIKDLMRQFLRGLDFL 124

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           H      I+HRDLK  N+L+      K++DFGLAR++
Sbjct: 125 HAN---CIVHRDLKPENILVTSGGQVKLADFGLARIY 158

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 13/165 (7%)

Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGFG V   ++   G+  A K+L  +     +G +   NE  ++ K+  R +V  L 
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVS-LA 59

Query: 572 CCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
              E  + + L++  M    L   +++  +      +A     + I  GL +LH   + R
Sbjct: 60  YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQ-IICGLEHLH---QRR 115

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           I++RDLK  NVLLD   N +ISD GLA    G       K   GT
Sbjct: 116 IVYRDLKPENVLLDDHGNVRISDLGLAVELKG---GKKIKGRAGT 157

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 59.1 bits (143), Expect = 2e-09
 Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 26/154 (16%)

Query: 515 KLGEGGFGPVYKGRLL-NGEEVAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
           ++G G  G VYK      G   A+K +  +       +   E+ ++  + H N+V+    
Sbjct: 81  RIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDM 140

Query: 573 CIEQGEKILILEYMPNKSLD-------VFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
               GE  ++LE+M   SL+        FL D  ++          I+ GIA    YLH 
Sbjct: 141 FDHNGEIQVLLEFMDGGSLEGTHIADEQFLADVARQ----------ILSGIA----YLH- 185

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
             R  I+HRD+K SN+L++   N KI+DFG++R+
Sbjct: 186 --RRHIVHRDIKPSNLLINSAKNVKIADFGVSRI 217

Length = 353

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 57.9 bits (140), Expect = 4e-09
 Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 28/174 (16%)

Query: 516 LGEGGFGPVY------KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG+GGFG V        G+L   +++  KRL  +  +G E    E  ++AK+  R +V  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKR--KGYEGAMVEKRILAKVHSRFIVS- 57

Query: 570 LGCCIE-QGEKILILEYMPNKSLDVFLFDPTKK-------RLLGWQARIGIIEGIAQGLL 621
           L    + + +  L++  M    L   +++  ++       R   + A+I        GL 
Sbjct: 58  LAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQI------ISGLE 111

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           +LH     RII+RDLK  NVLLD D N +ISD GLA      + Q  TK   GT
Sbjct: 112 HLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVEL--KDGQSKTKGYAGT 160

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 57.5 bits (139), Expect = 4e-09
 Identities = 42/152 (27%), Positives = 81/152 (53%), Gaps = 13/152 (8%)

Query: 515 KLGEGGFGPVYKGRLL----NGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           K+GEG FG   K  L+    +G++  +K +  S  S +  EE + E+ +++ ++H N+V+
Sbjct: 7   KIGEGSFG---KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQ 63

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
                 E G   ++++Y      D++     ++ +L  + +I  ++   Q  L L H   
Sbjct: 64  YQESFEENGNLYIVMDYCEGG--DLYKKINAQRGVLFPEDQI--LDWFVQICLALKHVHD 119

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
            +I+HRD+K+ N+ L +D   K+ DFG+AR+ 
Sbjct: 120 RKILHRDIKSQNIFLTKDGTIKLGDFGIARVL 151

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 57.2 bits (139), Expect = 5e-09
 Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 15/165 (9%)

Query: 516 LGEGGFGPVYKGRLLNGEEV-AVKRLSSQS--GQGLEE-FKNEMLLIAKLQHRNLVRILG 571
           LG GGFG V   ++ +     A+K +  +     G +E   +E  ++ +  H  +V+ L 
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVK-LY 59

Query: 572 CCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
              +  + I +++EY     L   L D  +     + AR   I  +     YLH+     
Sbjct: 60  RTFKDKKYIYMLMEYCLGGELWTILRD--RGLFDEYTARF-YIACVVLAFEYLHNRG--- 113

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           II+RDLK  N+LLD +   K+ DFG A+     +    T    GT
Sbjct: 114 IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGT 155

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 58.1 bits (141), Expect = 5e-09
 Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 23/162 (14%)

Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQ-----GLEEFKNEMLLIAKL 561
             +     +GEG +G V        G +VA+K++S    Q      L E K    ++ + 
Sbjct: 5   PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIK----ILRRF 60

Query: 562 QHRNLVRILGC----CIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           +H N++ IL        E    + ++ E M        L+   K + L        +  I
Sbjct: 61  KHENIIGILDIIRPPSFESFNDVYIVQELMETD-----LYKLIKTQHLSNDHIQYFLYQI 115

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +GL Y+H  +   ++HRDLK SN+LL+ + + KI DFGLAR
Sbjct: 116 LRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLAR 154

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 57.4 bits (139), Expect = 7e-09
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 20/153 (13%)

Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN---LVRILG 571
           +G G FG V K      G  +AVKR+ S      E+ +  M L   ++  +   +V+  G
Sbjct: 12  IGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD-EKEQKRLLMDLDVVMRSSDCPYIVKFYG 70

Query: 572 CCIEQGEKILILEYMPNKSLDVF---LFDPTKKRL----LGWQARIGIIEGIAQGLLYLH 624
               +G+  + +E M + SLD F   +++  K  +    LG      I     + L YL 
Sbjct: 71  ALFREGDCWICMELM-DISLDKFYKYVYEVLKSVIPEEILG-----KIAVATVKALNYLK 124

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
                +IIHRD+K SN+LLDR+ N K+ DFG++
Sbjct: 125 --EELKIIHRDVKPSNILLDRNGNIKLCDFGIS 155

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 56.6 bits (137), Expect = 1e-08
 Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 9/152 (5%)

Query: 514 CKLGEGGFGPVYKGR-LLNGEEVAVKR-LSSQSGQGLEEFK-NEMLLIAKLQHRNLVRIL 570
            K+GEG +G V+K R    G+ VA+K+ + S+    +++    E+ ++ +L+H NLV ++
Sbjct: 7   SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLI 66

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
                + +  L+ EY  +  L+    +P   R +       II    Q + + H ++   
Sbjct: 67  EVFRRKRKLHLVFEYCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKHN--- 120

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGG 662
            IHRD+K  N+L+ +    K+ DFG AR+  G
Sbjct: 121 CIHRDVKPENILITKQGQIKLCDFGFARILTG 152

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 56.2 bits (136), Expect = 1e-08
 Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 12/154 (7%)

Query: 517 GEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKN---EMLLIAKLQHRNLVRILGC 572
           G+G FG V   +  + +++ A+K ++ Q        +N   E  ++ +L H  LV  L  
Sbjct: 9   GKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVN-LWY 67

Query: 573 CIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
             +  E + L+++ +    L   L    K +    Q +  I E I   L YLH      I
Sbjct: 68  SFQDEENMYLVVDLLLGGDLRYHL--SQKVKFSEEQVKFWICE-IVLALEYLHSK---GI 121

Query: 632 IHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
           IHRD+K  N+LLD   +  I+DF +A     D L
Sbjct: 122 IHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL 155

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 56.8 bits (137), Expect = 1e-08
 Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 22/162 (13%)

Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E ++   ++G G +G V        GE+VA+K+LS   QS    +    E+ L+  +QH 
Sbjct: 15  ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHE 74

Query: 565 NLVRILGCCIEQG------EKILILEYMPNKSLDV--FLFDPTKKRLLGWQARIGIIEGI 616
           N++ +L             +  L++ YM      +        K + L +Q        +
Sbjct: 75  NVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQ--------M 126

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             GL Y+H      IIHRDLK  N+ ++ D   KI DFGLAR
Sbjct: 127 LCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 165

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 56.0 bits (135), Expect = 2e-08
 Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 19/174 (10%)

Query: 516 LGEGGFGPVYK-------GRLLNGEEVAVKRLS-----SQSGQGLEEFKNEMLLIAK-LQ 562
           LG G FG VYK         LL  +E+ V   +      +  + + +  +E+ +I + L+
Sbjct: 8   LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSL-DVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           H N+VR     +E     ++++ +    L + F     KK+    +    I   +   L 
Sbjct: 68  HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALR 127

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           YLH   R  I+HRDL  +N++L  D    I+DFGLA+    +        +VGT
Sbjct: 128 YLHKEKR--IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES---KLTSVVGT 176

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|214680 smart00473, PAN_AP, divergent subfamily of APPLE domains

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)

Query: 340 GDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLK-NCTCKAYANSNVTEGSGCLMW-FG 397
            D F++L N K P F  + ++   +L++CA++CL  NC+C+++  +N T   GCL+W   
Sbjct: 3   DDCFVRLPNTKLPGFSRIVIS-VASLEECASKCLNSNCSCRSFTYNNGT--KGCLLWSES 59

Query: 398 ELLDASRPIRNFTGQSVYLR 417
            L DA   +    G  +Y +
Sbjct: 60  SLGDA--RLFPSGGVDLYEK 77

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions. Length = 78

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 18/189 (9%)

Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLEEFKNEM 555
           +  L S+   T+ + +   +G+G +G VYK     +G   AVK L   S    EE + E 
Sbjct: 11  MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVD-EEIEAEY 69

Query: 556 LLIAKL-QHRNLVRILGCCIEQ-----GEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            ++  L  H N+V+  G   +      G+  L+LE     S+   +     K LL    R
Sbjct: 70  NILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELV-----KGLLICGQR 124

Query: 610 I--GIIEGIAQG-LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
           +   +I  I  G LL L H    RIIHRD+K +N+LL  +   K+ DFG++       L+
Sbjct: 125 LDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR 184

Query: 667 GNTKRIVGT 675
            NT   VGT
Sbjct: 185 RNTS--VGT 191

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 56.0 bits (135), Expect = 3e-08
 Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 11/171 (6%)

Query: 488 DKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQG 547
           D   D  +P    A    A+  +++   L  G  G V+      G+   V     Q G  
Sbjct: 46  DDDDDGLIPTKQKAREVVASLGYTVIKTLTPGSEGRVFVATK-PGQPDPVVLKIGQKGTT 104

Query: 548 LEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQ 607
           L E     +L+  + H +++R+    +      ++L   P+ S D++ +   + R L   
Sbjct: 105 LIE----AMLLQNVNHPSVIRMKDTLVSGAITCMVL---PHYSSDLYTYLTKRSRPLPID 157

Query: 608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             + I + I +GL YLH     RIIHRD+K  N+ ++      I D G A+
Sbjct: 158 QALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQ 205

Length = 357

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 55.2 bits (133), Expect = 4e-08
 Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 26/163 (15%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKR-LSSQSGQGLEEFK-NEMLLIAKLQHRN-LVRIL 570
           K+GEG +G VYK R    G+ VA+K+       +G+      E+ L+  L     +VR+L
Sbjct: 8   KIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLL 67

Query: 571 GCCIEQGEK-------ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY- 622
              +E  E+        L+ EY+ +  L  F+ D   +       R  +     +  +Y 
Sbjct: 68  --DVEHVEEKNGKPSLYLVFEYL-DSDLKKFM-DSNGRG----PGR-PLPAKTIKSFMYQ 118

Query: 623 ----LHHYSRFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
               + H  +  ++HRDLK  N+L+D+     KI+D GL R F
Sbjct: 119 LLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAF 161

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 54.5 bits (131), Expect = 4e-08
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 21/158 (13%)

Query: 516 LGEGGFGPVYKG--------RLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           LG+G F  ++KG          L+  EV +K L        E F     ++++L H++LV
Sbjct: 3   LGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLV 62

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              G C+   E I++ EY+   SLD +L        + W+     +E   Q    LH   
Sbjct: 63  LNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWK-----LEVAKQLAWALHFLE 117

Query: 628 RFRIIHRDLKASNVLLDRDM-----NP---KISDFGLA 657
              + H ++ A NVLL R+      NP   K+SD G++
Sbjct: 118 DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 55.5 bits (134), Expect = 4e-08
 Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 35/149 (23%)

Query: 532 GEEVAVKRLSSQSGQGLEEFKN---------EMLLIAKLQHRNLVRILGCCIEQ------ 576
           G+ VA+K+LS         F+N         E++L+  + H+N++ +L     Q      
Sbjct: 41  GQNVAIKKLS-------RPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93

Query: 577 GEKILILEYMPNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
            +  L++E M      V   D   +R+  L +Q   GI         +LH      IIHR
Sbjct: 94  QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGI--------KHLHSAG---IIHR 142

Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGD 663
           DLK SN+++  D   KI DFGLAR  G  
Sbjct: 143 DLKPSNIVVKSDCTLKILDFGLARTAGTS 171

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 54.8 bits (132), Expect = 4e-08
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 9/94 (9%)

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLGWQARIGIIEGIAQGLLYL 623
           +V   G  + +    + +E+M   SLD       P    +LG      I   + +GL YL
Sbjct: 65  IVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILG-----KIAVAVVEGLTYL 119

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             Y+  RI+HRD+K SN+L++     K+ DFG++
Sbjct: 120 --YNVHRIMHRDIKPSNILVNSRGQIKLCDFGVS 151

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 54.2 bits (130), Expect = 5e-08
 Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 6/147 (4%)

Query: 516 LGEGGFG-PVYKGRLLNGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           +GEG FG  +    + + ++ A+K +   +S   +E+ + E +L+AK++H N+V      
Sbjct: 8   VGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF 67

Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
              G   +++EY     L   +    + +L        I++   Q  L + H    R++H
Sbjct: 68  EADGHLYIVMEYCDGGDLMQKIKL-QRGKLFPEDT---ILQWFVQMCLGVQHIHEKRVLH 123

Query: 634 RDLKASNVLLDRDMNPKISDFGLARMF 660
           RD+K+ N+ L ++   K+ DFG AR+ 
Sbjct: 124 RDIKSKNIFLTQNGKVKLGDFGSARLL 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 54.3 bits (130), Expect = 7e-08
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 8/143 (5%)

Query: 515 KLGEGGFGPV-YKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           K+GEG  G V        G++VAVK++  +  Q  E   NE++++    H N+V +    
Sbjct: 29  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY 88

Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
           +   E  +++E++   +L     D      +  +    +   + + L YLH+     +IH
Sbjct: 89  LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIH 141

Query: 634 RDLKASNVLLDRDMNPKISDFGL 656
           RD+K+ ++LL  D   K+SDFG 
Sbjct: 142 RDIKSDSILLTSDGRIKLSDFGF 164

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 53.6 bits (129), Expect = 7e-08
 Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 23/160 (14%)

Query: 516 LGEGGFGPVYKGRLLN---------GEEVAVKR-LSSQSGQGLEEFKNEMLLIAKLQHRN 565
           LG+G F  +YKG L           G+EV+V   +     +    F     L+++L H++
Sbjct: 3   LGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKH 62

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           LV++ G C+   E I++ EY+    LDVFL        L W  ++ + + +A  L YL  
Sbjct: 63  LVKLYGVCVRD-ENIMVEEYVKFGPLDVFLHREKNNVSLHW--KLDVAKQLASALHYLED 119

Query: 626 YSRFRIIHRDLKASNVLLDRDMNP-------KISDFGLAR 658
               +++H ++   N+L+ R           K+SD G+  
Sbjct: 120 K---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 54.0 bits (130), Expect = 8e-08
 Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 9/62 (14%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR--MFGGDELQGNTKRIV 673
           IA GL +LH      II+RDLK  NV+LD + + KI+DFG+ +  +FGG      T+   
Sbjct: 110 IAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK----TTRTFC 162

Query: 674 GT 675
           GT
Sbjct: 163 GT 164

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 54.0 bits (130), Expect = 1e-07
 Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 29/146 (19%)

Query: 532 GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI--------------LGCCIEQG 577
            + VAVK++     Q ++    E+ +I +L H N+V++              +G   E  
Sbjct: 30  DKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELN 89

Query: 578 EKILILEYMPNKSLDVFLFDPTKK---RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
              ++ EYM     +V    P  +   RL  +Q        + +GL Y+H  +   ++HR
Sbjct: 90  SVYIVQEYMETDLANVLEQGPLSEEHARLFMYQ--------LLRGLKYIHSAN---VLHR 138

Query: 635 DLKASNVLLD-RDMNPKISDFGLARM 659
           DLK +NV ++  D+  KI DFGLAR+
Sbjct: 139 DLKPANVFINTEDLVLKIGDFGLARI 164

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 53.5 bits (128), Expect = 1e-07
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 8/143 (5%)

Query: 515 KLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           K+GEG  G V    +  +G+ VAVK++  +  Q  E   NE++++   QH N+V +    
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86

Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
           +   E  +++E++   +L     D      +  +    +   + + L  LH      +IH
Sbjct: 87  LVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLKALSVLHAQG---VIH 139

Query: 634 RDLKASNVLLDRDMNPKISDFGL 656
           RD+K+ ++LL  D   K+SDFG 
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGF 162

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 54.9 bits (132), Expect = 1e-07
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           +  G  G  YKG+ + NG +  VK ++  +     E  +    + KLQH N+V+++G C 
Sbjct: 698 ISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIAD----MGKLQHPNIVKLIGLCR 753

Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
            +    LI EY+  K+L   L      R L W+ R  I  GIA+ L +LH      ++  
Sbjct: 754 SEKGAYLIHEYIEGKNLSEVL------RNLSWERRRKIAIGIAKALRFLHCRCSPAVVVG 807

Query: 635 DLKASNVLLDRDMNPKI 651
           +L    +++D    P +
Sbjct: 808 NLSPEKIIIDGKDEPHL 824

Length = 968

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 13/146 (8%)

Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV-RILGCC 573
            L  G    VY       E+  +K   S+      E +  +L +   +    V ++L   
Sbjct: 5   LLKGGLTNRVYLLGT-KDEDYVLKINPSREKGADREREVAILQLLA-RKGLPVPKVLASG 62

Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
              G   L++E++  ++LD    +  +           I E +A+ L  LH      + H
Sbjct: 63  ESDGWSYLLMEWIEGETLDEVSEEEKED----------IAEQLAELLAKLHQLPLLVLCH 112

Query: 634 RDLKASNVLLDRDMNPKISDFGLARM 659
            DL   N+L+D      I D+  A  
Sbjct: 113 GDLHPGNILVDDGKILGIIDWEYAGY 138

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 52.8 bits (126), Expect = 3e-07
 Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 15/159 (9%)

Query: 514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFK-NEMLLIAKLQHRNLVRILGC 572
           CK+G G +G VYK +  +G++     L    G G+      E+ L+ +L+H N++ +   
Sbjct: 7   CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKV 66

Query: 573 CIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY-----LHH 625
            +   ++   L+ +Y  +    +  F    K     +  + +  G+ + LLY     +H+
Sbjct: 67  FLSHADRKVWLLFDYAEHDLWHIIKFHRASK---ANKKPVQLPRGMVKSLLYQILDGIHY 123

Query: 626 YSRFRIIHRDLKASNVLL----DRDMNPKISDFGLARMF 660
                ++HRDLK +N+L+          KI+D G AR+F
Sbjct: 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 52.3 bits (125), Expect = 3e-07
 Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 15/167 (8%)

Query: 509 NFSMECKLGEGGFGPVYKGRLLNGEEV----AVKRLSS----QSGQGLEEFKNEMLLIAK 560
           NF +   LG G +G V+  R ++G +     A+K L      Q  +  E  + E  ++  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 60

Query: 561 LQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           ++    +  L    +   K+ LIL+Y+    L    F    +R    +  + I  G  + 
Sbjct: 61  IRQSPFLVTLHYAFQTDTKLHLILDYINGGEL----FTHLSQRERFKEQEVQIYSG--EI 114

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
           +L L H  +  II+RD+K  N+LLD + +  ++DFGL++ F  DE++
Sbjct: 115 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE 161

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 52.3 bits (125), Expect = 4e-07
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 21/137 (15%)

Query: 532 GEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILIL 583
           G  VAVK+LS   Q+    +    E++L+  + H+N++ +L     Q       +  L++
Sbjct: 46  GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVM 105

Query: 584 EYMPNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNV 641
           E M      V   +   +R+  L +Q   GI            H     IIHRDLK SN+
Sbjct: 106 ELMDANLCQVIHMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNI 154

Query: 642 LLDRDMNPKISDFGLAR 658
           ++  D   KI DFGLAR
Sbjct: 155 VVKSDCTLKILDFGLAR 171

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 52.0 bits (124), Expect = 4e-07
 Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 20/162 (12%)

Query: 516 LGEGGFGPV---YKGRLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           +G G +G V   Y  RL   ++VAVK+LS   QS         E+ L+  ++H N++ +L
Sbjct: 23  VGSGAYGSVCSAYDTRLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLL 80

Query: 571 -----GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
                   IE   ++    Y+    +   L +  K + L  +    +I  + +GL Y+H 
Sbjct: 81  DVFTPATSIENFNEV----YLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHS 136

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
                IIHRDLK SNV ++ D   +I DFGLAR    DE+ G
Sbjct: 137 AG---IIHRDLKPSNVAVNEDCELRILDFGLARQ-ADDEMTG 174

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 51.9 bits (125), Expect = 5e-07
 Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 40/171 (23%)

Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
             +     +G G +G V       +G++VA+K++             ++  +AK   R L
Sbjct: 5   SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF---------DVPTLAKRTLREL 55

Query: 567 VRILGCCIEQGEKILILE-YMPNKSL--DVFL-FDPTKKRLLGWQARIGIIEG------- 615
            +IL    +    I I +   P  +   DV++  D  +  L        II         
Sbjct: 56  -KILRH-FKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHH------IIHSDQPLTEE 107

Query: 616 --------IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                   + +GL Y+H  +   +IHRDLK SN+L++ D   +I DFG+AR
Sbjct: 108 HIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMAR 155

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 51.5 bits (123), Expect = 6e-07
 Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 15/166 (9%)

Query: 516 LGEGGFGPVY-KGRLLNGEEVAVKRLSSQSGQGLEEFKNEM----LLIAKLQHRNLVRIL 570
           +G+G FG V    R  +G   AVK L  ++    +E  + M    +L+  L+H  LV  L
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG-L 61

Query: 571 GCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               +  EK+  +L+Y+    L  F     ++  L  +AR    E +A  + YLH     
Sbjct: 62  HYSFQTAEKLYFVLDYVNGGEL--FFHLQRERCFLEPRARFYAAE-VASAIGYLH---SL 115

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            II+RDLK  N+LLD   +  ++DFGL +   G E +  T    GT
Sbjct: 116 NIIYRDLKPENILLDSQGHVVLTDFGLCKE--GVEPEETTSTFCGT 159

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 51.6 bits (124), Expect = 6e-07
 Identities = 50/166 (30%), Positives = 72/166 (43%), Gaps = 34/166 (20%)

Query: 516 LGEGGFGPV----YKGRLLNGEEVAVKRLSSQSGQGLEEFKNEM------LLIAKLQHRN 565
           LG G FG V    YK     GE  A+K L        +E ++ M            +H  
Sbjct: 7   LGRGHFGKVLLAEYKK---TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPF 63

Query: 566 LVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           LV +  C   +     ++EY     L      DVF    ++ R + + A + +      G
Sbjct: 64  LVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVF----SEPRAVFYAACVVL------G 113

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR--MFGGD 663
           L YLH     +I++RDLK  N+LLD +   KI+DFGL +  M  GD
Sbjct: 114 LQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 50.9 bits (122), Expect = 7e-07
 Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 15/167 (8%)

Query: 509 NFSMECKLGEGGFGPVYKGRLLNGEE----VAVKRLSS----QSGQGLEEFKNEMLLIAK 560
           NF +   LG G +G V+  R + G +     A+K L      Q  +  E  + E  ++  
Sbjct: 1   NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEA 60

Query: 561 LQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           ++    +  L    +   K+ LIL+Y+    L   L+   ++     + R+ I E +   
Sbjct: 61  VRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLY--QREHFTESEVRVYIAEIV--- 115

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
            L L H  +  II+RD+K  N+LLD + +  ++DFGL++ F  +E +
Sbjct: 116 -LALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEE 161

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 51.2 bits (123), Expect = 8e-07
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 20/133 (15%)

Query: 531 NGEEVAVKR--LSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN 588
               VAVK+  L S S + L+  + E++   +LQH N++  +   I   E  ++   M  
Sbjct: 24  TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83

Query: 589 KSLDVFL-------FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNV 641
            S +  L                       I++ +   L Y+H       IHR +KAS++
Sbjct: 84  GSCEDLLKTHFPEGLPELAIAF--------ILKDVLNALDYIHSKG---FIHRSVKASHI 132

Query: 642 LLDRDMNPKISDF 654
           LL  D    +S  
Sbjct: 133 LLSGDGKVVLSGL 145

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 51.1 bits (123), Expect = 8e-07
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 18/83 (21%)

Query: 581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG------IAQGLLYLHHYSRFRIIHR 634
           L++EYMP   L            +    R  +         IA+ +L L    +   IHR
Sbjct: 78  LVMEYMPGGDL------------MNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHR 125

Query: 635 DLKASNVLLDRDMNPKISDFGLA 657
           D+K  N+L+D D + K++DFGL 
Sbjct: 126 DIKPDNILIDADGHIKLADFGLC 148

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 50.8 bits (121), Expect = 9e-07
 Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 15/159 (9%)

Query: 514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFK-NEMLLIAKLQHRNLVRILGC 572
           CK+G G +G VYK +  +G++     L    G G+      E+ L+ +L+H N++ +   
Sbjct: 7   CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKV 66

Query: 573 CIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY-----LHH 625
            +   ++   L+ +Y  +    +  F    K     +  + +   + + LLY     +H+
Sbjct: 67  FLSHSDRKVWLLFDYAEHDLWHIIKFHRASK---ANKKPMQLPRSMVKSLLYQILDGIHY 123

Query: 626 YSRFRIIHRDLKASNVLL----DRDMNPKISDFGLARMF 660
                ++HRDLK +N+L+          KI+D G AR+F
Sbjct: 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 50.9 bits (122), Expect = 1e-06
 Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 15/166 (9%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEM----LLIAKLQHRNLVRIL 570
           +G+G FG V   +   +G+  AVK L  ++    +E K+ M    +L+  ++H  LV  L
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG-L 61

Query: 571 GCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               +  +K+  +L+Y+    L  F     ++     +AR    E IA  L YLH     
Sbjct: 62  HYSFQTADKLYFVLDYVNGGEL--FFHLQRERSFPEPRARFYAAE-IASALGYLH---SL 115

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            II+RDLK  N+LLD   +  ++DFGL +   G E    T    GT
Sbjct: 116 NIIYRDLKPENILLDSQGHVVLTDFGLCKE--GIEHSKTTSTFCGT 159

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 50.7 bits (121), Expect = 1e-06
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 11/157 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE--EVAVKRLSSQS---GQGLEEFKNEMLLIAKLQ 562
           E+F+    LG G FG V      N +   VA+KR         + ++   +E  ++  + 
Sbjct: 30  EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN 89

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H   V + G   ++    L+LE++       FL     +R   +   +G     AQ +L 
Sbjct: 90  HPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFL-----RRNKRFPNDVGCFYA-AQIVLI 143

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
             +     I++RDLK  N+LLD+D   K++DFG A++
Sbjct: 144 FEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKV 180

Length = 340

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 50.9 bits (122), Expect = 1e-06
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 3/58 (5%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
           I +GL YLH      I+HRD+K  N+L++ +   KI DFGLAR+   DE +  T+ +V
Sbjct: 112 ILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVV 166

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 50.4 bits (120), Expect = 2e-06
 Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 32/168 (19%)

Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
           +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H N++ +L  
Sbjct: 25  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 84

Query: 573 CIEQGEKILILEYMPNKSL----DVFLF---------DPTKKRLLGWQARIGIIEGIAQG 619
                       + P +SL    DV+L          +  K + L       +I  I +G
Sbjct: 85  ------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 132

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 133 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 176

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 49.9 bits (119), Expect = 2e-06
 Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 12/148 (8%)

Query: 516 LGEGGFGPV------YKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG+GGFG V        G++   +++  KRL  +SG+ +   + E+L   K+    +V +
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEIL--EKVNSPFIVNL 58

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
                 +    L++  M    L   +++   +R L  +  I     I  G+L+LH     
Sbjct: 59  AYAFESKTHLCLVMSLMNGGDLKYHIYN-VGERGLEMERVIHYSAQITCGILHLH---SM 114

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLA 657
            I++RD+K  NVLLD   N ++SD GLA
Sbjct: 115 DIVYRDMKPENVLLDDQGNCRLSDLGLA 142

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 50.4 bits (120), Expect = 2e-06
 Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 46/172 (26%)

Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAK-LQHRNLVRILGC- 572
           +G G FG VY+   ++  E+VA+K++         ++KN  LLI K L H N++ +    
Sbjct: 74  IGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYY 128

Query: 573 ---CIEQGEKIL----ILEYMP-------------NKSLDVFLFDPTKKRLLGWQARIGI 612
              C ++ EK +    ++E++P             N +L +FL      +L  +Q     
Sbjct: 129 YTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLV-----KLYSYQ----- 178

Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD-RDMNPKISDFGLAR-MFGG 662
              + + L Y+H  S+F I HRDLK  N+L+D      K+ DFG A+ +  G
Sbjct: 179 ---LCRALAYIH--SKF-ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG 224

Length = 440

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 49.8 bits (119), Expect = 2e-06
 Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 12/149 (8%)

Query: 516 LGEGGFGPVYKGRLLNGEEV----AVKRLSSQSGQGLEEF--KNEMLLIAKLQHRNLVRI 569
           LG+G FG V+  R + G +     A+K L   + +  +    K E  ++A++ H  +V++
Sbjct: 4   LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKL 63

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
                 +G+  LIL+++    L    F    K ++  +  +     +A+  L L H    
Sbjct: 64  HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY--LAELALALDHLHSL 117

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            II+RDLK  N+LLD + + K++DFGL++
Sbjct: 118 GIIYRDLKPENILLDEEGHIKLTDFGLSK 146

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 49.8 bits (119), Expect = 2e-06
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 28/158 (17%)

Query: 516 LGEGGFGPVYKGRLLNGEE----VAVKRLSS----QSGQGLEEFKNEMLLIAKLQHRNLV 567
           LG+GG+G V++ R + G +     A+K L      ++ +     K E  ++  ++H  +V
Sbjct: 4   LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV 63

Query: 568 RILGCCIEQGEKILILEYMPNKSL-------DVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
            ++      G+  LILEY+    L        +F+ D     L             ++  
Sbjct: 64  DLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYL-------------SEIS 110

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           L L H  +  II+RDLK  N+LLD   + K++DFGL +
Sbjct: 111 LALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCK 148

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 50.1 bits (120), Expect = 2e-06
 Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 3/43 (6%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           + +GL Y+H  +   ++HRDLK SN+LL+ + + KI DFGLAR
Sbjct: 117 LLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR 156

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 49.2 bits (117), Expect = 3e-06
 Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 12/148 (8%)

Query: 516 LGEGGFGPV------YKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG+GGFG V        G++   +++  KR+  + G+ +    NE  ++ K+  R +V +
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMA--LNEKQILEKVNSRFVVSL 65

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
                 +    L+L  M    L   ++   +      +A     E I  GL  LH   + 
Sbjct: 66  AYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAE-ICCGLEDLH---QE 121

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLA 657
           RI++RDLK  N+LLD   + +ISD GLA
Sbjct: 122 RIVYRDLKPENILLDDHGHIRISDLGLA 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 49.2 bits (117), Expect = 3e-06
 Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 27/172 (15%)

Query: 516 LGEGGFGPV------YKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG+GGFG V        G++   + +  KR+  + G+ +    NE  ++ K+  + +V +
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMA--LNEKQILEKVNSQFVVNL 65

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDP-----TKKRLLGWQARIGIIEGIAQGLLYLH 624
                 +    L+L  M    L   +++       ++R L + A I         L  L 
Sbjct: 66  AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEI---------LCGLE 116

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA-RMFGGDELQGNTKRIVGT 675
              R   ++RDLK  N+LLD   + +ISD GLA ++  G+ ++G     VGT
Sbjct: 117 DLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR----VGT 164

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 50.6 bits (121), Expect = 3e-06
 Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 21/142 (14%)

Query: 532 GEEVAVKRLSSQSGQGLEE---FKNEMLLIAKLQHRNLVRIL--GCCIEQGEKILILEYM 586
           G EVA+K L + + +   +   F+ E  L A+L H N+V +L  G     G    + EY+
Sbjct: 3   GHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEA-PPGLLFAVFEYV 61

Query: 587 PNKSLDVFLFDPTKKRLLGWQARIGIIEG---IAQGLLYLHHYSRFRIIHRDLKASNVLL 643
           P ++L         + +L     +   E    + Q L  L       I+HRDLK  N+++
Sbjct: 62  PGRTL---------REVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMV 112

Query: 644 D-RDMNP--KISDFGLARMFGG 662
               + P  K+ DFG+  +  G
Sbjct: 113 SQTGVRPHAKVLDFGIGTLLPG 134

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 49.1 bits (117), Expect = 3e-06
 Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 12/145 (8%)

Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRNLVRILGCC 573
           LG G  G VYK   LL    +AVK +       L+ +  +E+ ++ K     ++   G  
Sbjct: 9   LGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAF 68

Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
             +    +  E+M   SLDV+   P  + +LG   RI +   + +GL YL      +I+H
Sbjct: 69  FVENRISICTEFMDGGSLDVYRKIP--EHVLG---RIAV--AVVKGLTYLW---SLKILH 118

Query: 634 RDLKASNVLLDRDMNPKISDFGLAR 658
           RD+K SN+L++     K+ DFG++ 
Sbjct: 119 RDVKPSNMLVNTRGQVKLCDFGVST 143

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 49.6 bits (118), Expect = 3e-06
 Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 31/159 (19%)

Query: 516 LGEGGFGPV-YKGRLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
           +G G +G V        G +VA+K+L    QS    +    E+ L+  ++H N++ +L  
Sbjct: 23  VGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDV 82

Query: 573 CIEQGEKILILEYMPNKSLDVF----LFDPTKKRLLG--------WQARIG-IIEGIAQG 619
                       + P+ SLD F    L  P     LG         + RI  ++  + +G
Sbjct: 83  ------------FTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKG 130

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           L Y+H      IIHRDLK  N+ ++ D   KI DFGLAR
Sbjct: 131 LKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 166

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 48.7 bits (116), Expect = 4e-06
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 14/150 (9%)

Query: 515 KLGEGGFGPVYKGRLLNGEEVA---VKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           ++G G FG V    +     VA   VK L ++ S +   EF  +      LQH N+++ L
Sbjct: 2   EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCL 61

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKR----LLGWQARIGIIEGIAQGLLYLHHY 626
           G C+E    +L+ EY     L  +L      R    LL  Q R+     IA G+ ++H  
Sbjct: 62  GQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQ-RMAC--EIAAGVTHMH-- 116

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGL 656
            +   +H DL   N  L  D+  K+ D+G+
Sbjct: 117 -KHNFLHSDLALRNCFLTSDLTVKVGDYGI 145

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 49.3 bits (117), Expect = 4e-06
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 21/137 (15%)

Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC-----CIEQGEKI-LILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L        +E+ + + L++E M
Sbjct: 45  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELM 104

Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 105 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 153

Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 154 SDCTLKILDFGLARTAG 170

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 48.5 bits (116), Expect = 5e-06
 Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 9/62 (14%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR--MFGGDELQGNTKRIV 673
           I  GL +LH      II+RDLK  NVLLD + + KI+DFG+ +  + GG      T    
Sbjct: 105 IVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV----TTSTFC 157

Query: 674 GT 675
           GT
Sbjct: 158 GT 159

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 48.5 bits (116), Expect = 5e-06
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 18/158 (11%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEM--LLIAKLQHR 564
            +     ++G G  G VYK R    G  +AVK++     +  EE K  +  L +    H 
Sbjct: 15  NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHD 72

Query: 565 --NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGW--QARIG-IIEGIAQG 619
              +V+  G  I   +  + +E M          D   KR+ G   +  +G +   I + 
Sbjct: 73  CPYIVKCYGYFITDSDVFICMELMST------CLDKLLKRIQGPIPEDILGKMTVAIVKA 126

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
           L YL    +  +IHRD+K SN+LLD   N K+ DFG++
Sbjct: 127 LHYLK--EKHGVIHRDVKPSNILLDASGNVKLCDFGIS 162

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 48.5 bits (115), Expect = 5e-06
 Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 13/148 (8%)

Query: 516 LGEGGFGPVYKGRLLNGEE-VAVKRLSSQSGQGLEEFKN----EMLLIAKLQHRNLVRIL 570
           +GEG +G V K R    +E VA+K+         EE K     E+ ++  L+  N+V + 
Sbjct: 9   VGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN--EEVKETTLRELKMLRTLKQENIVELK 66

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
                +G+  L+ EY+    L++    P    +   + R  I + I      +H   +  
Sbjct: 67  EAFRRRGKLYLVFEYVEKNMLELLEEMPNG--VPPEKVRSYIYQLIKA----IHWCHKND 120

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
           I+HRD+K  N+L+  +   K+ DFG AR
Sbjct: 121 IVHRDIKPENLLISHNDVLKLCDFGFAR 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 47.5 bits (113), Expect = 9e-06
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 22/153 (14%)

Query: 516 LGEGGFGPV------YKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG+GGFG V        G++   +++  KR+  + G+ +    NE  ++ K+  R +V +
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LNEKQILEKVNSRFVVSL 65

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDP-----TKKRLLGWQARIGIIEGIAQGLLYLH 624
                 +    L+L  M    L   +++       ++R + + A I        GL  LH
Sbjct: 66  AYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITC------GLEDLH 119

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
              R RI++RDLK  N+LLD   + +ISD GLA
Sbjct: 120 ---RERIVYRDLKPENILLDDYGHIRISDLGLA 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 47.7 bits (113), Expect = 1e-05
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 27/140 (19%)

Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLD 592
           VA+K+LS   Q+    +    E++L+  + H+N++ +L              + P KSL+
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99

Query: 593 VF--------LFDPTKKRLLGWQ---ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNV 641
            F        L D    +++  +    R+  +  + Q L  + H     IIHRDLK SN+
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNI 157

Query: 642 LLDRDMNPKISDFGLARMFG 661
           ++  D   KI DFGLAR  G
Sbjct: 158 VVKSDCTLKILDFGLARTAG 177

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 47.2 bits (112), Expect = 1e-05
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 32/159 (20%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFK-NEMLLIAKLQHR----NL 566
           +LG+G +G VYK      G  +A+K  RL       L+E K N++++   + H+     +
Sbjct: 8   ELGKGNYGSVYKVLHRPTGVTMAMKEIRLE------LDESKFNQIIMELDILHKAVSPYI 61

Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG--------IAQ 618
           V   G    +G   + +EYM   SLD        K   G  A  GI E         + +
Sbjct: 62  VDFYGAFFIEGAVYMCMEYMDAGSLD--------KLYAGGVATEGIPEDVLRRITYAVVK 113

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
           GL +L       IIHRD+K +NVL++ +   K+ DFG++
Sbjct: 114 GLKFLK--EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVS 150

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 47.3 bits (112), Expect = 2e-05
 Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 15/165 (9%)

Query: 509 NFSMECKLGEGGFGPVYKGRLLNGEEV----AVKRLSS----QSGQGLEEFKNEMLLIAK 560
           NF +   LG G +G V+  R + G +     A+K L      Q  + +E  + E  ++  
Sbjct: 1   NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH 60

Query: 561 LQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           ++    +  L    +   K+ LIL+Y+    +   L+    +R    +  +    G  + 
Sbjct: 61  VRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLY----QRDNFSEDEVRFYSG--EI 114

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           +L L H  +  I++RD+K  N+LLD + +  ++DFGL++ F  +E
Sbjct: 115 ILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE 159

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 46.8 bits (111), Expect = 2e-05
 Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 15/150 (10%)

Query: 516 LGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKNEM----LLIAKLQHRNLVRIL 570
           LG+G FG V   RL     + AVK L        ++ +  M    +L     H  L + L
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ-L 61

Query: 571 GCCIEQGEKIL-ILEYMPNKSLDVFLFDPTK-KRLLGWQARIGIIEGIAQGLLYLHHYSR 628
            CC +  +++  ++E++    L   +F   K +R    +AR    E I   L++LH    
Sbjct: 62  YCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAE-ITSALMFLHDKG- 116

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             II+RDLK  NVLLD + + K++DFG+ +
Sbjct: 117 --IIYRDLKLDNVLLDHEGHCKLADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 12/167 (7%)

Query: 516 LGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCC 573
           +G+G +G V+K     NG + AVK L        EE + E  ++  L  H N+V+  G  
Sbjct: 26  IGKGTYGKVFKVLNKKNGSKAAVKILDPIHDID-EEIEAEYNILKALSDHPNVVKFYGMY 84

Query: 574 ----IEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
               ++ G+++ L+LE     S+   +    K+     +  I  I  + + L+ L H   
Sbjct: 85  YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYI--LHEALMGLQHLHV 142

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            + IHRD+K +N+LL  +   K+ DFG++       L+ NT   VGT
Sbjct: 143 NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS--VGT 187

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 45.8 bits (108), Expect = 4e-05
 Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 19/174 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHR--- 564
           ++F    +LG G  G V K +      +  ++L     +     +N+++   ++ H    
Sbjct: 5   DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK--PAIRNQIIRELQVLHECNS 62

Query: 565 -NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTK--KRLLGWQARIGIIEGIAQGLL 621
             +V   G     GE  + +E+M   SLD  L +  +  + +LG +  I ++ G+A    
Sbjct: 63  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-KVSIAVLRGLA---- 117

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           YL    + +I+HRD+K SN+L++     K+ DFG++    G  +       VGT
Sbjct: 118 YLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 165

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 45.4 bits (107), Expect = 4e-05
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 24/154 (15%)

Query: 516 LGEGGFGPV------YKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG+GGFG V        G++   +++  KR+  + G+ +    NE  ++ K+  R +V  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA--LNEKRILEKVNSRFVVS- 64

Query: 570 LGCCIEQGEKI-LILEYMPNKSLDVFLFDP-----TKKRLLGWQARIGIIEGIAQGLLYL 623
           L    E  + + L+L  M    L   +++       ++R + + A +        GL  L
Sbjct: 65  LAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAEL------CCGLEDL 118

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
               R RI++RDLK  N+LLD   + +ISD GLA
Sbjct: 119 Q---RERIVYRDLKPENILLDDRGHIRISDLGLA 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 45.5 bits (108), Expect = 5e-05
 Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 3/45 (6%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           I  GL Y+H  +   ++HRDLK  N+L++ D   KI DFGLAR F
Sbjct: 114 ILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGF 155

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 45.2 bits (107), Expect = 5e-05
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 41/174 (23%)

Query: 519 GGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG 577
           G FG VY  +    G+  A+K L         +  N      K +   +       + QG
Sbjct: 7   GAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTN-----VKAERAIM-------MIQG 54

Query: 578 EK----------------ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           E                  L++EY+        +      + LG        + IA+ +L
Sbjct: 55  ESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLI------KTLGGLPEDWAKQYIAEVVL 108

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            +    +  IIHRD+K  N+L+D+  + K++DFGL+R   G E     K+ VGT
Sbjct: 109 GVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRN--GLE----NKKFVGT 156

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 45.2 bits (107), Expect = 6e-05
 Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 16/157 (10%)

Query: 509 NFSMECKLGEGGFGPV----YKGRLLNGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKL 561
           +F M   LG G FG V    +KG    GE  A+K L  +     + ++    E  ++ +L
Sbjct: 19  DFEMGETLGTGSFGRVRIAKHKGT---GEYYAIKCLKKREILKMKQVQHVAQEKSILMEL 75

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
            H  +V ++    ++     +LE++    L  F       R     A+    E +     
Sbjct: 76  SHPFIVNMMCSFQDENRVYFLLEFVVGGEL--FTHLRKAGRFPNDVAKFYHAE-LVLAFE 132

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           YLH      II+RDLK  N+LLD   + K++DFG A+
Sbjct: 133 YLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAK 166

Length = 329

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 45.2 bits (107), Expect = 7e-05
 Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 3/43 (6%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           I  GL +LH      II+RDLK  NVLLD+D + KI+DFG+ +
Sbjct: 105 IICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 44.8 bits (106), Expect = 8e-05
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 13/149 (8%)

Query: 516 LGEGGFGPVYKGRLLNGEEV-AVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+G FG V    L   +EV A+K L          ++    E  ++A       +  L 
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALH 62

Query: 572 CCIEQGEKIL-ILEYMPNKSLDVFLFDPTKKRLLGW-QARIGIIEGIAQGLLYLHHYSRF 629
           CC +  +++  ++EY+    L   +F   + R     ++R    E +   L++LH   R 
Sbjct: 63  CCFQTKDRLFFVMEYVNGGDL---MFQIQRSRKFDEPRSRFYAAE-VTLALMFLH---RH 115

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +I+RDLK  N+LLD + + K++DFG+ +
Sbjct: 116 GVIYRDLKLDNILLDAEGHCKLADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 45.2 bits (107), Expect = 9e-05
 Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 44/193 (22%)

Query: 486 RRDKSKDSWLPLF-----SLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKR 539
           R++K+ D++L  +      +  +    E+F +   +G G FG V   R  + ++V A+K 
Sbjct: 16  RKNKNIDNFLSRYEKAAEKITKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKL 75

Query: 540 LSSQSGQGLEEFKNEML-------------LIAKLQHRNLVRILGCCIEQGEKIL--ILE 584
           LS          K EM+             ++A      +V++      Q +K L  ++E
Sbjct: 76  LS----------KFEMIKRSDSAFFWEERDIMAHANSEWIVQL--HYAFQDDKYLYMVME 123

Query: 585 YMPNKSLDVFL--FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVL 642
           YMP   L   +  +D  +K    W AR    E +   L  +H       IHRD+K  N+L
Sbjct: 124 YMPGGDLVNLMSNYDIPEK----W-ARFYTAE-VVLALDAIHSMG---FIHRDVKPDNML 174

Query: 643 LDRDMNPKISDFG 655
           LD+  + K++DFG
Sbjct: 175 LDKSGHLKLADFG 187

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 44.4 bits (105), Expect = 1e-04
 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           I   L YLH      +++RDLK  N++LD+D + KI+DFGL +
Sbjct: 104 IVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 44.5 bits (105), Expect = 1e-04
 Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 11/148 (7%)

Query: 516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+G FG V    L   GE  AVK L          +E    E  ++A       +  L 
Sbjct: 3   LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLY 62

Query: 572 CCIEQGEKIL-ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           C  +  E +  ++E++    L   + D  K R   ++A     E I  GL +LH      
Sbjct: 63  CTFQTKEHLFFVMEFLNGGDLMFHIQD--KGRFDLYRATFYAAE-IVCGLQFLHSKG--- 116

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
           II+RDLK  NV+LDRD + KI+DFG+ +
Sbjct: 117 IIYRDLKLDNVMLDRDGHIKIADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 44.9 bits (106), Expect = 1e-04
 Identities = 18/43 (41%), Positives = 29/43 (67%)

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           Q LL +HH     +IHRD+K++N+LL  +   K+ DFG ++M+
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMY 193

Length = 496

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 44.7 bits (105), Expect = 1e-04
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 22/121 (18%)

Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE---YMPNKSLDV----FLFDPT--- 599
           + +NE+L + +L H N+++I        E+IL  E   YM  +  D     F++D     
Sbjct: 209 QLENEILALGRLNHENILKI--------EEILRSEANTYMITQKYDFDLYSFMYDEAFDW 260

Query: 600 KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
           K R L  Q R  I++ +   + Y+H     ++IHRD+K  N+ L+ D    + DFG A  
Sbjct: 261 KDRPLLKQTR-AIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNCDGKIVLGDFGTAMP 316

Query: 660 F 660
           F
Sbjct: 317 F 317

Length = 501

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 44.0 bits (104), Expect = 2e-04
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 17/87 (19%)

Query: 577 GEKILILEYMPNKSLDVFLFDPTKK------RLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           GE  + +E+M   SLD  L    KK       +LG   +I I   + +GL YL    + +
Sbjct: 72  GEISICMEHMDGGSLDQVL----KKAGRIPENILG---KISI--AVLRGLTYLR--EKHK 120

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLA 657
           I+HRD+K SN+L++     K+ DFG++
Sbjct: 121 IMHRDVKPSNILVNSRGEIKLCDFGVS 147

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 43.8 bits (103), Expect = 2e-04
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 13/149 (8%)

Query: 516 LGEGGFGPVYKGRLLN-GEEVAVK-----RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +G GGFG VY  R  + G+  A+K     R+  + G+ L   +  ML +        +  
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 570 LGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
           +       +K+  IL+ M    L   L   ++  +            I  GL ++H  +R
Sbjct: 62  MSYAFHTPDKLSFILDLMNGGDLHYHL---SQHGVFSEAEMRFYAAEIILGLEHMH--NR 116

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLA 657
           F +++RDLK +N+LLD   + +ISD GLA
Sbjct: 117 F-VVYRDLKPANILLDEHGHVRISDLGLA 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 43.8 bits (103), Expect = 2e-04
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 13/165 (7%)

Query: 516 LGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKNEM----LLIAKLQHRNLVRIL 570
           +G+G FG V   R    E+  AVK L  ++    +E K+ M    +L+  ++H  LV + 
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 62

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
                  +   +L+Y+    L  F     ++  L  +AR    E IA  L YLH      
Sbjct: 63  FSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAE-IASALGYLH---SLN 116

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           I++RDLK  N+LLD   +  ++DFGL +     E  G T    GT
Sbjct: 117 IVYRDLKPENILLDSQGHIVLTDFGLCKE--NIEHNGTTSTFCGT 159

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 43.7 bits (103), Expect = 2e-04
 Identities = 18/45 (40%), Positives = 29/45 (64%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           +A+ +L +    +   IHRD+K  N+L+DR  + K+SDFGL+  F
Sbjct: 107 MAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGF 151

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 43.5 bits (102), Expect = 2e-04
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 15/150 (10%)

Query: 516 LGEGGFGPVY-KGRLLNGEEVAVKRLSSQSGQGLEEFKNEM----LLIAKLQHRNLVRIL 570
           +G+G FG V    R L+G+  AVK L  +     +E K+ M    +L+  ++H  LV  L
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG-L 61

Query: 571 GCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGW-QARIGIIEGIAQGLLYLHHYSR 628
               +  EK+  +L+++    L    F   ++R     +AR    E IA  L YLH    
Sbjct: 62  HYSFQTTEKLYFVLDFVNGGEL---FFHLQRERSFPEPRARFYAAE-IASALGYLH---S 114

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             I++RDLK  N+LLD   +  ++DFGL +
Sbjct: 115 INIVYRDLKPENILLDSQGHVVLTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 2e-04
 Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 38/159 (23%)

Query: 516 LGEGGFGPVYKGRL----LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH----RNL- 566
           +G G FG V   RL      G   A+K+L           K+EML   ++ H    R++ 
Sbjct: 9   IGRGAFGEV---RLVQKKDTGHIYAMKKLR----------KSEMLEKEQVAHVRAERDIL 55

Query: 567 -------VRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGW-QARIGIIEGIA 617
                  V  L    +    + LI+EY+P   +   L    KK      + R  I E I 
Sbjct: 56  AEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLM---KKDTFTEEETRFYIAETI- 111

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL 656
              L +    +   IHRD+K  N+LLD   + K+SDFGL
Sbjct: 112 ---LAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGL 147

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 43.0 bits (101), Expect = 2e-04
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 8/149 (5%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEE--FKNEMLLIAKLQHRNLVRILGC 572
           +G+G +G V   R   +G++  +K+L+ ++    E    + E  L+++L+H N+V     
Sbjct: 8   VGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRES 67

Query: 573 CI-EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              E G   +++ +     L   L +   K L   Q     ++ IA  L YLH      I
Sbjct: 68  WEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQ-IAMALQYLHEK---HI 123

Query: 632 IHRDLKASNVLLDRDMNPKISDFGLARMF 660
           +HRDLK  NV L R    K+ D G+AR+ 
Sbjct: 124 LHRDLKTQNVFLTRTNIIKVGDLGIARVL 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (101), Expect = 3e-04
 Identities = 20/54 (37%), Positives = 32/54 (59%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
            A+ L  L +  +F +I+RDLK  N+LLD   +  + DFGL ++   D+ + NT
Sbjct: 99  TAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNT 152

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 43.1 bits (101), Expect = 3e-04
 Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 23/154 (14%)

Query: 516 LGEGGFGPVY------KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +G GGFG VY       G++   + +  KR+  + G+ L   +  ML +        +  
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 570 LGCCIEQGEKI-LILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIAQGLLYL 623
           +       +K+  IL+ M    L   L     F   + R    +    II G+       
Sbjct: 62  MTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATE----IILGLE------ 111

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
           H ++RF +++RDLK +N+LLD   + +ISD GLA
Sbjct: 112 HMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 42.8 bits (101), Expect = 3e-04
 Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           + L Y+H  + F   HRDLK  N+L + D   KI DFGLAR
Sbjct: 114 RALKYIHTANVF---HRDLKPKNILANADCKLKICDFGLAR 151

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 42.7 bits (100), Expect = 4e-04
 Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           I+ GL +LH   R  II+RDLK  NV+LD + + KI+DFG+ +
Sbjct: 110 ISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 149

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 42.6 bits (100), Expect = 4e-04
 Identities = 24/89 (26%), Positives = 48/89 (53%), Gaps = 5/89 (5%)

Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           L++++ H +L  + G C+   E I++ E++ +  LDV L     +  + W  +I + + +
Sbjct: 69  LMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KITVAQQL 126

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDR 645
           A  L YL   +   ++H ++ A N+LL R
Sbjct: 127 ASALSYLEDKN---LVHGNVCAKNILLAR 152

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (101), Expect = 4e-04
 Identities = 18/43 (41%), Positives = 29/43 (67%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           IA+ +L L H  ++ I++RDLK  N+LLD   +  + DFGL++
Sbjct: 102 IAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSK 144

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 43.3 bits (102), Expect = 4e-04
 Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 3/47 (6%)

Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
           I  +A  L YLH +    IIHRDLK  N+L+  + + K++DFGL+++
Sbjct: 110 ISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 42.3 bits (99), Expect = 5e-04
 Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 17/120 (14%)

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTK--KRLLGWQARIGIIEGIAQGLLYL 623
           +V   G     GE  + +E+M   SLD  L    +  +++LG +  I +I    +GL YL
Sbjct: 65  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVI----KGLTYL 119

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFG--------LARMFGGDELQGNTKRIVGT 675
               + +I+HRD+K SN+L++     K+ DFG        +A  F G     + +R+ GT
Sbjct: 120 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT 177

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 42.3 bits (99), Expect = 6e-04
 Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           IA GL +LH      II+RDLK  NV+LD + + KI+DFG+ +
Sbjct: 110 IAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 149

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 41.9 bits (98), Expect = 8e-04
 Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           I   L YLH  S   +++RDLK  N++LD+D + KI+DFGL +
Sbjct: 104 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 144

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 41.9 bits (98), Expect = 8e-04
 Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 22/155 (14%)

Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG G FG V   R ++     A+K L  +       +   K E  ++A+  +  +VR+  
Sbjct: 9   LGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYY 68

Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG------IAQGLLYLHH 625
              ++     +++Y+P   +   L             R+GI         IA+    +  
Sbjct: 69  SFQDKDNLYFVMDYIPGGDMMSLLI------------RMGIFPEDLARFYIAELTCAVES 116

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             +   IHRD+K  N+L+DRD + K++DFGL   F
Sbjct: 117 VHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 151

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 41.8 bits (98), Expect = 8e-04
 Identities = 59/210 (28%), Positives = 82/210 (39%), Gaps = 70/210 (33%)

Query: 516 LGEGGFGPVYK------GRLLNGEEVAVKRLSSQSGQGLEEFKNEM----LLIAKLQHRN 565
           LG G FG V +       +  +   VAVK L  + G    E+K  M    +LI    H N
Sbjct: 15  LGRGAFGKVIQASAFGIEKSASCRTVAVKML--KEGATASEYKALMTELKILIHIGHHLN 72

Query: 566 LVRILGCCIEQGEKIL-ILEYMPNKSLDVFL------FDPT----------------KKR 602
           +V +LG C + G  ++ I+EY    +L  +L      F P                 K+R
Sbjct: 73  VVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQR 132

Query: 603 LL-----------GWQA--RIGIIEGIAQG---------LLYLHHYSRFRI--------- 631
           L            G+     +  +E   +G         L  L  YS F++         
Sbjct: 133 LDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYS-FQVARGMEFLAS 191

Query: 632 ---IHRDLKASNVLLDRDMNPKISDFGLAR 658
              IHRDL A N+LL  +   KI DFGLAR
Sbjct: 192 RKCIHRDLAARNILLSENNVVKICDFGLAR 221

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 41.8 bits (98), Expect = 0.001
 Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +AQG+ +L   +    IHRD+ A NVLL      KI DFGLAR
Sbjct: 221 VAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLAR 260

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 41.3 bits (97), Expect = 0.001
 Identities = 18/45 (40%), Positives = 27/45 (60%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           IA+    +    +   IHRD+K  N+L+DRD + K++DFGL   F
Sbjct: 107 IAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 151

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 40.8 bits (95), Expect = 0.001
 Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 13/149 (8%)

Query: 516 LGEGGFGPVYKGRLLNGEEV----AVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           +G G +  V   RL   +++     VK+      + ++  + E  +  +      +  L 
Sbjct: 3   IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLH 62

Query: 572 CCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQ-ARIGIIEGIAQGLLYLHHYSRF 629
            C +   ++ L++EY+    L   +F   ++R L  + AR    E I   L +LH     
Sbjct: 63  SCFQTTSRLFLVIEYVNGGDL---MFHMQRQRKLPEEHARFYAAE-ICIALNFLHERG-- 116

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            II+RDLK  NVLLD D + K++D+G+ +
Sbjct: 117 -IIYRDLKLDNVLLDADGHIKLTDYGMCK 144

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 40.9 bits (96), Expect = 0.002
 Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 3/40 (7%)

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
           L YLH+Y    I+HRDLK  N+L+    + K++DFGL+++
Sbjct: 114 LEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKI 150

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 40.8 bits (95), Expect = 0.002
 Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 3/43 (6%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           I   L YLH  SR  +++RD+K  N++LD+D + KI+DFGL +
Sbjct: 104 IVSALEYLH--SR-DVVYRDIKLENLMLDKDGHIKITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 40.8 bits (95), Expect = 0.002
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 20/152 (13%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---EMLLIAKLQHRNLVRILG 571
           LG+G FG V   R   +G+  A+K L  +     +E  +   E  ++   +H  L  +  
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKY 62

Query: 572 CCIEQGEKILILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
               +     ++EY+    L   L     F   + R  G +        I   L YLH  
Sbjct: 63  SFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAE--------IVSALDYLH-- 112

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +I++RDLK  N++LD+D + KI+DFGL +
Sbjct: 113 -SGKIVYRDLKLENLMLDKDGHIKITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 40.3 bits (94), Expect = 0.002
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           I  GL +LH      I++RDLK  N+LLD D + KI+DFG+ +
Sbjct: 105 IICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 40.9 bits (96), Expect = 0.003
 Identities = 46/171 (26%), Positives = 69/171 (40%), Gaps = 33/171 (19%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ-SGQGL--EEFKNEMLLIAKLQHRNLVRIL 570
            +G+GG G VY     +    VA+K++    S   L  + F  E  + A L H  +V + 
Sbjct: 9   LIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY 68

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLG--WQ---------------ARIGII 613
             C   G+   +   MP      ++   T K LL   WQ               A + I 
Sbjct: 69  SIC-SDGD--PVYYTMP------YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIF 119

Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             I   + Y+H  S+  ++HRDLK  N+LL       I D+G A     +E
Sbjct: 120 HKICATIEYVH--SK-GVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEE 167

Length = 932

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 40.2 bits (94), Expect = 0.003
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 554 EMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII 613
           E+ ++  + HR ++ ++        K  +   MP    D+F +   +   L  +  I I 
Sbjct: 136 EIDILKTISHRAIINLIHA---YRWKSTVCMVMPKYKCDLFTY-VDRSGPLPLEQAITIQ 191

Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             + + L YLH      IIHRD+K  N+ LD   N  + DFG A
Sbjct: 192 RRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAA 232

Length = 392

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 39.6 bits (92), Expect = 0.004
 Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 3/43 (6%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +A+G+ +L   SR + IHRDL A N+LL  +   KI DFGLAR
Sbjct: 183 VARGMEFLA--SR-KCIHRDLAARNILLSENNVVKICDFGLAR 222

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 39.7 bits (92), Expect = 0.004
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 8/97 (8%)

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQ-ARIGIIEGIAQGLL 621
           H  LV +  C   +     ++EY+    L   +F   ++R L  + AR    E I+  L 
Sbjct: 55  HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 110

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           YLH      II+RDLK  NVLLD + + K++D+G+ +
Sbjct: 111 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 144

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 39.5 bits (92), Expect = 0.004
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 6/58 (10%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE---LQGNTK 670
           +A+G+ +L   +    IHRDL A N+LL      KI DFGLAR    D    ++GN +
Sbjct: 223 VAKGMSFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNAR 277

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	675
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.97
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.97
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.96
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.96
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.96
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.96
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.96
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.96
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.95
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.95
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.95
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.95
KOG0605	550	consensus NDR and related serine/threonine kinases	99.95
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.94
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.94
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	99.94
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.94
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.94
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.94
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.94
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.93
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.93
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.93
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.93
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.93
KOG3653	534	consensus Transforming growth factor beta/activin	99.93
KOG0578	550	consensus p21-activated serine/threonine protein k	99.93
KOG0198	313	consensus MEKK and related serine/threonine protei	99.93
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.93
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.93
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	99.93
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.92
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.92
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.92
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.92
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.92
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.92
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.92
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.92
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.92
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.92
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.92
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.91
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.91
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.91
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.91
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.91
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.91
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.91
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.91
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.91
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.91
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.91
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.91
PTZ00267	478	NIMA-related protein kinase; Provisional	99.91
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.91
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.91
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.91
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.91
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.91
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.91
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.91
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.91
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.91
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.91
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.91
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.91
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.9
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.9
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.9
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.9
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.9
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.9
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.9
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.9
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.9
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.9
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.9
KOG0589	426	consensus Serine/threonine protein kinase [General	99.9
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.9
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.9
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.9
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.9
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.9
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.9
KOG0610	459	consensus Putative serine/threonine protein kinase	99.9
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.9
PHA03212	391	serine/threonine kinase US3; Provisional	99.9
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.9
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.9
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.9
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.9
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.9
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.9
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.9
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.9
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.9
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.9
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.9
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.9
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.89
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.89
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.89
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.89
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.89
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.89
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.89
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.89
KOG0586	596	consensus Serine/threonine protein kinase [General	99.89
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.89
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.89
PTZ00283	496	serine/threonine protein kinase; Provisional	99.89
PHA03211	461	serine/threonine kinase US3; Provisional	99.89
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.89
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.89
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.89
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.89
PHA02988	283	hypothetical protein; Provisional	99.89
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.89
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.89
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.89
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.89
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.89
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.89
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.89
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.89
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.89
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.89
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.89
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.89
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.89
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.89
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.89
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.89
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.89
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.88
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.88
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.88
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.88
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.88
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.88
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.88
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.88
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.88
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.88
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.88
PHA03207	392	serine/threonine kinase US3; Provisional	99.88
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.88
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.88
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.88
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.88
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.88
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.88
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.88
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.88
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.88
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.88
PHA03209	357	serine/threonine kinase US3; Provisional	99.88
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.88
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.88
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.88
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.88
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.88
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.88
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.88
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.88
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.88
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.88
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.88
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.88
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.88
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.88
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.88
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.88
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.88
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.88
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.88
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.88
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.88
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.88
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.88
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.88
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.88
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.88
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.88
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.88
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.88
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.88
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.88
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.88
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.87
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.87
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.87
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.87
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.87
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.87
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.87
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.87
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.87
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.87
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.87
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.87
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.87
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.87
PTZ00036	440	glycogen synthase kinase; Provisional	99.87
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.87
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.87
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.87
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.87
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.87
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.87
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.87
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.87
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.87
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.87
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.87
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.87
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.87
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.87
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.87
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.87
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.87
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.87
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.87
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.87
PRK09188	365	serine/threonine protein kinase; Provisional	99.87
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.87
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.87
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.87
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.87
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.87
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.87
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.87
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.87
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.87
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.87
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.87
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.87
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.87
KOG0584	632	consensus Serine/threonine protein kinase [General	99.87
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.87
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.87
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.86
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.86
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.86
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.86
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.86
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.86
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.86
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.86
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.86
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.86
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.86
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.86
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.86
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.86
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.86
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.86
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.86
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.86
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.86
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.86
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.86
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.86
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.86
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.86
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.86
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.86
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.86
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.86
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.86
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.86
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.86
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.86
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.86
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.86
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.86
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.86
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.86
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.85
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.85
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.85
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.85
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.85
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.85
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.85
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.85
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.85
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.85
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.85
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.85
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.85
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.85
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.85
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.85
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.85
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.85
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.85
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.85
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.85
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.85
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.85
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.85
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.85
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.85
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.85
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.85
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.85
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.85
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.85
PHA03210	501	serine/threonine kinase US3; Provisional	99.85
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.84
PTZ00284	467	protein kinase; Provisional	99.84
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.84
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.84
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.84
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.84
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.84
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.84
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.84
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.84
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.84
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.84
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.84
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.84
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.84
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.84
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.84
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.84
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.84
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.84
PLN00009	294	cyclin-dependent kinase A; Provisional	99.84
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.84
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.84
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.84
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.84
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.84
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.83
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.83
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.83
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.83
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.83
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.83
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.83
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.83
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.83
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.83
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.83
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.83
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.83
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.83
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.83
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.83
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.83
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.82
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.82
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.82
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.82
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.82
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.82
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.82
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.82
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.82
KOG1152	772	consensus Signal transduction serine/threonine kin	99.82
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.81
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.81
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.81
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.81
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.81
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.81
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.81
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.81
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.81
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.81
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.81
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.81
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.81
PHA02882	294	putative serine/threonine kinase; Provisional	99.81
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.8
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.8
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.8
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.8
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.8
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.79
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.79
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.79
PRK10345	210	hypothetical protein; Provisional	99.78
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.78
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.78
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.78
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.78
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.78
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.77
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.77
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.77
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.77
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.77
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.76
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.76
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.75
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.75
smart00090	237	RIO RIO-like kinase.	99.75
PRK14879	211	serine/threonine protein kinase; Provisional	99.74
PRK12274	218	serine/threonine protein kinase; Provisional	99.74
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.74
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.73
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.73
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.72
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.72
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.72
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.72
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.72
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.7
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.7
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.68
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.66
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.65
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.64
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.64
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.63
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.62
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.61
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.6
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.6
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.59
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.48
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.46
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.36
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	99.31
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.31
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.28
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.22
PLN00181	793	protein SPA1-RELATED; Provisional	99.2
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.18
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.17
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.16
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.14
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.07
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.03
KOG3087	229	consensus Serine/threonine protein kinase [General	99.03
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.85
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.83
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.82
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.8
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.68
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.65
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	98.62
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.56
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.56
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	98.54
KOG1243	690	consensus Protein kinase [General function predict	98.52
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.47
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.46
PRK09902	216	hypothetical protein; Provisional	98.46
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.41
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.4
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.38
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.3
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.28
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	98.25
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.23
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.21
PF01636	239	APH: Phosphotransferase enzyme family This family	98.19
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.19
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.13
PLN02876	822	acyl-CoA dehydrogenase	98.04
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.03
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.01
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	98.01
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.01
PRK10593	297	hypothetical protein; Provisional	97.77
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.76
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.76
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.75
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.7
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.67
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.56
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.54
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.35
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.2
PRK05231	319	homoserine kinase; Provisional	97.19
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.11
PLN02236	344	choline kinase	96.97
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.93
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	96.71
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.69
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.61
KOG2268	465	consensus Serine/threonine protein kinase [Signal	96.6
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.59
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.3
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.17
COG2334	331	Putative homoserine kinase type II (protein kinase	96.08
PLN02756	418	S-methyl-5-thioribose kinase	95.99
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.71
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	95.66
KOG2270	520	consensus Serine/threonine protein kinase involved	95.65
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	95.46
PRK06148	1013	hypothetical protein; Provisional	95.34
PRK12396	409	5-methylribose kinase; Reviewed	95.23

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-36  Score=320.16  Aligned_cols=168  Identities=51%  Similarity=0.811  Sum_probs=154.2

Q ss_pred             CCCcccHHHHHHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEE
Q 005825          494 WLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC  573 (675)
Q Consensus       494 ~~~~~~~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~  573 (675)
                      ....|++.++..+|++|...+.||+|+||.||+|.+.+++.||||++.....+..++|.+|+.++.+++|||||+|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            45679999999999999999999999999999999999999999998865433156799999999999999999999999


Q ss_pred             EeCC-eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEe
Q 005825          574 IEQG-EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       574 ~~~~-~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                      .+.+ +++||||||++|+|+++|+..... .++|..|++||.++|+||+|||+.+.++||||||||+|||||+++++||+
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls  219 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS  219 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence            9999 599999999999999999875444 78999999999999999999999998899999999999999999999999


Q ss_pred             eeccceecCC
Q 005825          653 DFGLARMFGG  662 (675)
Q Consensus       653 DFGla~~~~~  662 (675)
                      |||||+....
T Consensus       220 DFGLa~~~~~  229 (361)
T KOG1187|consen  220 DFGLAKLGPE  229 (361)
T ss_pred             CccCcccCCc
Confidence            9999976654

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-31  Score=273.11  Aligned_cols=152  Identities=32%  Similarity=0.554  Sum_probs=136.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..+|.+.++||+|+|++||+|++. ++.+||||.+.+.  .....+....|+++|+.++|||||+|++++..++..+|||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            467888889999999999999874 5899999999765  4455677889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC------CCeEEeeeccc
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD------MNPKISDFGLA  657 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~------~~~kl~DFGla  657 (675)
                      ||++||+|..|++   +.+.+++.+...+..|+|.||++||+++   ||||||||+||||+..      -.+||+|||+|
T Consensus        89 EyC~gGDLs~yi~---~~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA  162 (429)
T KOG0595|consen   89 EYCNGGDLSDYIR---RRGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFA  162 (429)
T ss_pred             EeCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence            9999999999994   4457899999999999999999999998   9999999999999764      46899999999


Q ss_pred             eecCCCc
Q 005825          658 RMFGGDE  664 (675)
Q Consensus       658 ~~~~~~~  664 (675)
                      |.+....
T Consensus       163 R~L~~~~  169 (429)
T KOG0595|consen  163 RFLQPGS  169 (429)
T ss_pred             hhCCchh
Confidence            9997554

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.6e-30  Score=264.21  Aligned_cols=161  Identities=30%  Similarity=0.450  Sum_probs=138.4

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc-------cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG-------QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG  577 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-------~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~  577 (675)
                      ..+.|.+.+.||+|+||.|-+|.. .+|+.||||+++++..       ......++|+++|++|+|||||++.+++...+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d  249 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD  249 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence            346778889999999999999964 5799999999986421       12334679999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC---CCeEEeee
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD---MNPKISDF  654 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~---~~~kl~DF  654 (675)
                      ..|||||||+||+|.+++.   ..+.+.+..-..++.|++.|+.|||+++   |+||||||+|||+..+   ..+||+||
T Consensus       250 s~YmVlE~v~GGeLfd~vv---~nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDF  323 (475)
T KOG0615|consen  250 SSYMVLEYVEGGELFDKVV---ANKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDF  323 (475)
T ss_pred             ceEEEEEEecCccHHHHHH---hccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEeccc
Confidence            9999999999999999984   3456777777889999999999999998   9999999999999765   78999999


Q ss_pred             ccceecCCCcccCCCCceecC
Q 005825          655 GLARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       655 Gla~~~~~~~~~~~~~~~~GT  675 (675)
                      |||+..+...   .+++.+||
T Consensus       324 GlAK~~g~~s---fm~TlCGT  341 (475)
T KOG0615|consen  324 GLAKVSGEGS---FMKTLCGT  341 (475)
T ss_pred             chhhccccce---ehhhhcCC
Confidence            9999987443   46678887

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.96  E-value=9e-30  Score=257.15  Aligned_cols=162  Identities=28%  Similarity=0.406  Sum_probs=142.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ..++|++.++||+|+||+||.++.. +++.+|+|.+++..   ....+..+.|..||.+++||+||+++-.|++.+++||
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            3578999999999999999999765 58999999998752   3356788999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |+||+.||.|..+|   ++++.+++....-++..|+.||.|||+++   ||||||||+|||||++|+++|+|||||+.--
T Consensus       103 Vld~~~GGeLf~hL---~~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~  176 (357)
T KOG0598|consen  103 VLDYLNGGELFYHL---QREGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDL  176 (357)
T ss_pred             EEeccCCccHHHHH---HhcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence            99999999999999   45567888776677778999999999998   9999999999999999999999999999765


Q ss_pred             CCcccCCCCceecC
Q 005825          662 GDELQGNTKRIVGT  675 (675)
Q Consensus       662 ~~~~~~~~~~~~GT  675 (675)
                      .++.  .|.+++||
T Consensus       177 ~~~~--~t~tfcGT  188 (357)
T KOG0598|consen  177 KDGD--ATRTFCGT  188 (357)
T ss_pred             cCCC--ccccccCC
Confidence            4443  35557888

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.96  E-value=3.7e-29  Score=264.55  Aligned_cols=151  Identities=40%  Similarity=0.625  Sum_probs=133.4

Q ss_pred             cceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-eEEEEEEec
Q 005825          510 FSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-EKILILEYM  586 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-~~~lV~Ey~  586 (675)
                      +.+.+.||+|+||+||+|.+.....||||++.....  ...++|.+|+.+|.+++|||||+++|+|.+.. ...+|||||
T Consensus        43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~  122 (362)
T KOG0192|consen   43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM  122 (362)
T ss_pred             hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence            344466999999999999997666699999986432  22569999999999999999999999999888 799999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-CeEEeeeccceecCCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLARMFGGD  663 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~  663 (675)
                      ++|+|..+++.. ....+++..++.++.+||+||.|||++.+  ||||||||+||||+.++ ++||+|||+++.....
T Consensus       123 ~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~  197 (362)
T KOG0192|consen  123 PGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS  197 (362)
T ss_pred             CCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence            999999999764 46689999999999999999999999864  99999999999999997 9999999999987543

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=5.3e-29  Score=265.28  Aligned_cols=160  Identities=34%  Similarity=0.481  Sum_probs=145.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..|...+.||+|||+.||+++. ..|+.||+|++.+.   .....+.+.+||+|.+.|+|||||+++++|++.++.|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5789999999999999999997 77999999999763   3345677899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |++++++|..++.   +.+.+++.++..+..||+.||.|||+++   |||||||..|++|++++++||+|||||..+..+
T Consensus        98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~  171 (592)
T KOG0575|consen   98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD  171 (592)
T ss_pred             EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence            9999999999994   5678999999999999999999999987   999999999999999999999999999999877


Q ss_pred             cccCCCCceecC
Q 005825          664 ELQGNTKRIVGT  675 (675)
Q Consensus       664 ~~~~~~~~~~GT  675 (675)
                      +.+..|  ++||
T Consensus       172 ~Erk~T--lCGT  181 (592)
T KOG0575|consen  172 GERKKT--LCGT  181 (592)
T ss_pred             ccccce--ecCC
Confidence            655444  8888

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.96  E-value=2.8e-30  Score=228.39  Aligned_cols=109  Identities=47%  Similarity=0.803  Sum_probs=82.2

Q ss_pred             CcEEEEecCCCCCCCC--cceEEEeeCCeEEEEeCCCCeEEEe-ccCCCC-CCceEEEccCCCEEEEeCCCCCCCcceee
Q 005825           72 DTVVWVANRDRPISDH--NAVLTISNNGKLVLLNQTNGTIWST-NASSEA-KNPVAQLRDDGNLVIRDNSSVNTTENYLW  147 (675)
Q Consensus        72 ~tvVW~Anr~~pv~~~--~~~l~l~~~G~Lvl~~~~g~~vWss-~~~~~~-~~~~a~L~d~GNlVl~~~~~~~~~~~~lW  147 (675)
                      +||||+|||+.|+...  .++|.|+.||+|+|++..++.+|++ ++.+.. .+.+|+|+|+|||||+|.     .+.+||
T Consensus         2 ~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~-----~~~~lW   76 (114)
T PF01453_consen    2 RTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDS-----SGNVLW   76 (114)
T ss_dssp             --------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEET-----TSEEEE
T ss_pred             cccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEee-----cceEEE
Confidence            6899999999999543  4899999999999999999999999 555433 578999999999999995     678999


Q ss_pred             eeccCCchhhhccccccccccCCCceeEEEecCCCCCC
Q 005825          148 QSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPS  185 (675)
Q Consensus       148 qSFd~PtDTlLpg~~l~~~~~tg~~~~l~S~~s~~dps  185 (675)
                      |||||||||+||+|+|+.+..++.+..++||++.+|||
T Consensus        77 ~Sf~~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   77 QSFDYPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             ESTTSSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             eecCCCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            99999999999999999988887777899999999996

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.96  E-value=8.4e-29  Score=250.16  Aligned_cols=158  Identities=30%  Similarity=0.396  Sum_probs=136.1

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-eEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-EKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-~~~lV~Ey  585 (675)
                      +.+..+.||+|..|+|||++++ +++.+|+|.+... .+...+++.+|++++++.+||+||+++|.|.... ...|+|||
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY  159 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY  159 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence            4556689999999999999874 6889999999643 3445678999999999999999999999999999 59999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCcc
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL  665 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~  665 (675)
                      |++|||+.++..   .+.+++...-.|+.+|++||.|||+..  +||||||||+|||++..|+|||+|||.++.+...  
T Consensus       160 MDgGSLd~~~k~---~g~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--  232 (364)
T KOG0581|consen  160 MDGGSLDDILKR---VGRIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--  232 (364)
T ss_pred             cCCCCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccccHHhhhh--
Confidence            999999999943   356889999999999999999999732  4999999999999999999999999999988544  


Q ss_pred             cCCCCceecC
Q 005825          666 QGNTKRIVGT  675 (675)
Q Consensus       666 ~~~~~~~~GT  675 (675)
                        .-.+.+||
T Consensus       233 --~a~tfvGT  240 (364)
T KOG0581|consen  233 --IANTFVGT  240 (364)
T ss_pred             --hccccccc
Confidence              22335665

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.1e-28  Score=256.77  Aligned_cols=162  Identities=30%  Similarity=0.457  Sum_probs=140.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~~  580 (675)
                      ..+.|+.+++||+|.||.||+|+. .+|+.||+|++.-..  .....-..+||.||++|.||||++|.+...+.  ...|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            456788889999999999999975 679999999997543  44456677899999999999999999999877  6899


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||+|||+. +|.-++..  ....++..++..++.|++.||+|+|.++   |+|||||.+|||||.+|.+||+|||||+++
T Consensus       195 lVFeYMdh-DL~GLl~~--p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y  268 (560)
T KOG0600|consen  195 LVFEYMDH-DLSGLLSS--PGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFY  268 (560)
T ss_pred             EEEecccc-hhhhhhcC--CCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeec
Confidence            99999975 66666632  3446889999999999999999999998   999999999999999999999999999999


Q ss_pred             CCCcccCCCCcee
Q 005825          661 GGDELQGNTKRIV  673 (675)
Q Consensus       661 ~~~~~~~~~~~~~  673 (675)
                      ..++....|.++|
T Consensus       269 ~~~~~~~~T~rVv  281 (560)
T KOG0600|consen  269 TPSGSAPYTSRVV  281 (560)
T ss_pred             cCCCCcccccceE
Confidence            8887766777765

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.6e-28  Score=259.22  Aligned_cols=153  Identities=39%  Similarity=0.633  Sum_probs=137.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      +.+.+.+.||+|-||+|+.|++.....||+|.++.. ....+.|.+|+.+|++|+|+|||+|+|+|..++.++||||||+
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~  284 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP  284 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence            344566899999999999999988889999999864 4455789999999999999999999999999889999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCcc
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL  665 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~  665 (675)
                      .|+|.+||.. .....+...+.+.++.|||+||+||+++.   +|||||.++||||+++..+||+||||||.+..++.
T Consensus       285 ~GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y  358 (468)
T KOG0197|consen  285 KGSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY  358 (468)
T ss_pred             cCcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence            9999999975 23556888999999999999999999997   99999999999999999999999999997766654

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.95  E-value=4.6e-28  Score=253.94  Aligned_cols=153  Identities=30%  Similarity=0.438  Sum_probs=137.4

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~  580 (675)
                      ..++|.+.+.||+|+|++|++|+. ..++++|||++.+.   .....+-+..|-.+|.+| .||.|++|+..|++...+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            457899999999999999999975 45899999999764   234455677889999999 8999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +|+||.++|+|.++|.   +.+.+++.....++.+|+.||+|||.++   ||||||||+|||||++|++||+|||-|+.+
T Consensus       151 FvLe~A~nGdll~~i~---K~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIK---KYGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             EEEEecCCCcHHHHHH---HhCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccC
Confidence            9999999999999994   4577899889999999999999999998   999999999999999999999999999999


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      .+.+
T Consensus       225 ~~~~  228 (604)
T KOG0592|consen  225 SPSQ  228 (604)
T ss_pred             Chhh
Confidence            7644

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.95  E-value=8.5e-28  Score=234.90  Aligned_cols=157  Identities=32%  Similarity=0.447  Sum_probs=140.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .+|+..+.||.|+||+|.+++.+ +|..+|+|++++...   ...+...+|..+|+.+.||++++|.+.+.+.+.++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            57888899999999999999865 488999999987532   34567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||++||.|..+|+   +.+.+++....-+|.+|+.||+|||+.+   |++|||||+|||||++|.+||+|||+|+.+.+.
T Consensus       124 eyv~GGElFS~Lr---k~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r  197 (355)
T KOG0616|consen  124 EYVPGGELFSYLR---KSGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR  197 (355)
T ss_pred             eccCCccHHHHHH---hcCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence            9999999999994   4567888888999999999999999998   999999999999999999999999999988543


Q ss_pred             cccCCCCceecC
Q 005825          664 ELQGNTKRIVGT  675 (675)
Q Consensus       664 ~~~~~~~~~~GT  675 (675)
                           |-+++||
T Consensus       198 -----T~TlCGT  204 (355)
T KOG0616|consen  198 -----TWTLCGT  204 (355)
T ss_pred             -----EEEecCC
Confidence                 4457776

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.95  E-value=4e-28  Score=237.55  Aligned_cols=149  Identities=25%  Similarity=0.380  Sum_probs=130.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      +.|+.+.++|+|+||.||+++.++ |+.||||++....  +...+-.++|+++|++++|+|+|.|+.+|..+...+||+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            457777899999999999999765 9999999987532  3334567899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |++..-|+++-.   ....++.....+++.|+++|+.|+|++.   +|||||||+||||+..+.+||+|||+||.+.+
T Consensus        82 ~~dhTvL~eLe~---~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~  153 (396)
T KOG0593|consen   82 YCDHTVLHELER---YPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSA  153 (396)
T ss_pred             ecchHHHHHHHh---ccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcC
Confidence            999888877652   2334777888899999999999999997   99999999999999999999999999999974

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.95  E-value=3.9e-27  Score=247.34  Aligned_cols=150  Identities=27%  Similarity=0.391  Sum_probs=135.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ..++|+++..||+|+||.||+++.+ +|..+|+|+|++.   ....++.++.|-++|...++|+||+|+..|++.+.+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            4579999999999999999999765 5999999999874   34556789999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+|||++..+|   .+...|++.....++.+++.|++-||+.+   +|||||||+|+|||..|++||+||||+.-+.
T Consensus       219 iMEylPGGD~mTLL---~~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~  292 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLL---MRKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD  292 (550)
T ss_pred             EEEecCCccHHHHH---HhcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence            99999999999999   45667888877777788999999999998   9999999999999999999999999997653

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=6e-29  Score=240.99  Aligned_cols=166  Identities=27%  Similarity=0.452  Sum_probs=140.3

Q ss_pred             CCcceeeeeCCcCceeEEEEE-EcCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEE-EEEeCCe-EEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILG-CCIEQGE-KILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g-~~~~~~~-~~lV  582 (675)
                      .+|+++++||+|+||+||++. +.+|..+|.|.++-.  ..+..+....|+.+|++|+|||||++++ -+.+..+ ++||
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            468888999999999999996 578999999998732  3445667889999999999999999998 4555555 8899


Q ss_pred             EEecCCCCHHHHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcCC-CceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          583 LEYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLYLHHYSR-FRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~-~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |||+..|+|...+...+ ..+.+++++.++++.|+++||..+|.+-+ .-|+||||||.||+|+.+|.+||+||||+|++
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            99999999999986532 35678999999999999999999998321 13999999999999999999999999999999


Q ss_pred             CCCcccCCCCceecC
Q 005825          661 GGDELQGNTKRIVGT  675 (675)
Q Consensus       661 ~~~~~~~~~~~~~GT  675 (675)
                      ....+.  ....|||
T Consensus       179 ~s~~tf--A~S~VGT  191 (375)
T KOG0591|consen  179 SSKTTF--AHSLVGT  191 (375)
T ss_pred             cchhHH--HHhhcCC
Confidence            776653  3346777

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.94  E-value=2.9e-27  Score=208.61  Aligned_cols=109  Identities=36%  Similarity=0.792  Sum_probs=103.2

Q ss_pred             eeeCccCCCceeee-eecCceeeEEEEeeecCeeEEEEeecCCCceEEEEECcCccEEEEEecCCCCceEEeeeccCCCC
Q 005825          211 TCTGEWTGDGFVSA-LSNTNFLYKQFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYC  289 (675)
Q Consensus       211 ~~~g~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~G~l~~~~~~~~~~~W~~~~~~p~~~C  289 (675)
                      ||+|+|+|..|+++ ++....++.+.|+.++++.+++|...+.+.++|++||++|++++|.|++++++|.++|++|.|+|
T Consensus         1 wrsG~WnG~~f~g~p~~~~~~~~~~~fv~~~~e~~~t~~~~~~s~~~r~~ld~~G~l~~~~w~~~~~~W~~~~~~p~d~C   80 (110)
T PF00954_consen    1 WRSGPWNGQRFSGIPEMSSNSLYNYSFVSNNEEVYYTYSLSNSSVLSRLVLDSDGQLQRYIWNESTQSWSVFWSAPKDQC   80 (110)
T ss_pred             CCccccCCeEECCcccccccceeEEEEEECCCeEEEEEecCCCceEEEEEEeeeeEEEEEEEecCCCcEEEEEEecccCC
Confidence            89999999999998 77667778899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccCCCCcccCCCCCCCCCccCCCccCC
Q 005825          290 GKYGYCGANTICGPDQKPMCQCLEGFRLKS  319 (675)
Q Consensus       290 ~~~~~CG~~g~C~~~~~~~C~C~~Gf~~~~  319 (675)
                      |+|+.||+||+|+.+..|.|+|||||+|++
T Consensus        81 d~y~~CG~~g~C~~~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   81 DVYGFCGPNGICNSNNSPKCSCLPGFEPKN  110 (110)
T ss_pred             CCccccCCccEeCCCCCCceECCCCcCCCc
Confidence            999999999999988889999999999975

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=99.94  E-value=1.4e-26  Score=206.51  Aligned_cols=115  Identities=43%  Similarity=0.742  Sum_probs=101.7

Q ss_pred             CcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCCCCeEEEe
Q 005825           33 SFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWST  112 (675)
Q Consensus        33 ~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~g~~vWss  112 (675)
                      +.|.+|++|+|+++.|++|||.+......+.+|||+..+.++||.||++.|. +..++|.|+.||+|+|+|.+|.++|++
T Consensus         2 ~~l~~~~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~~~~vW~snt~~~~-~~~~~l~l~~dGnLvl~~~~g~~vW~S   80 (116)
T cd00028           2 NPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILYKGSSRTVVWVANRDNPS-GSSCTLTLQSDGNLVIYDGSGTVVWSS   80 (116)
T ss_pred             cCcCCCCEEEeCCCcEEEecccCCCCCCeEEEEEEeCCCCeEEEECCCCCCC-CCCEEEEEecCCCeEEEcCCCcEEEEe
Confidence            5688899999999999999999876544899999987767899999999984 456899999999999999999999999


Q ss_pred             ccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCC
Q 005825          113 NASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYP  153 (675)
Q Consensus       113 ~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~P  153 (675)
                      ++.+.....+|+|+|+|||||++.     .+.+||||||||
T Consensus        81 ~~~~~~~~~~~~L~ddGnlvl~~~-----~~~~~W~Sf~~P  116 (116)
T cd00028          81 NTTRVNGNYVLVLLDDGNLVLYDS-----DGNFLWQSFDYP  116 (116)
T ss_pred             cccCCCCceEEEEeCCCCEEEECC-----CCCEEEcCCCCC
Confidence            987534567899999999999986     568999999999

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.94  E-value=5.7e-27  Score=225.99  Aligned_cols=151  Identities=34%  Similarity=0.566  Sum_probs=132.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC-ccC-HHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS-GQG-LEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~-~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .+|...++||+|.||.||+|+. .+|+.||||+++... ..+ .....+|++.|+.++|+||+.|+++|.+.+...||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            4577778999999999999985 569999999998542 222 3457789999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ||+ .+|+..+++  +...+...+...++.++++||+|||.+.   |+||||||.|+|++++|.+||+||||||.++...
T Consensus        82 fm~-tdLe~vIkd--~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen   82 FMP-TDLEVVIKD--KNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN  155 (318)
T ss_pred             ecc-ccHHHHhcc--cccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence            995 589888865  3456888999999999999999999998   9999999999999999999999999999997543

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=1.9e-27  Score=240.12  Aligned_cols=151  Identities=26%  Similarity=0.509  Sum_probs=137.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      -+|++.+.||+|.||+|-+++. ..|++||||.+++.   +.++.-.+++|++||..|+||||+.++.+|..++...|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            4678889999999999999975 67999999999864   4455667899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||..+|.|.+|+   ...+.+++.+...+++||..|+.|+|.+.   ++|||||.+|||||+++++||+||||+.++..+
T Consensus       133 EYaS~GeLYDYi---Ser~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~~  206 (668)
T KOG0611|consen  133 EYASGGELYDYI---SERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYADK  206 (668)
T ss_pred             EecCCccHHHHH---HHhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhccc
Confidence            999999999999   44567999999999999999999999987   999999999999999999999999999988654


Q ss_pred             c
Q 005825          664 E  664 (675)
Q Consensus       664 ~  664 (675)
                      .
T Consensus       207 k  207 (668)
T KOG0611|consen  207 K  207 (668)
T ss_pred             c
Confidence            4

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.94  E-value=5e-27  Score=259.39  Aligned_cols=152  Identities=35%  Similarity=0.566  Sum_probs=135.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCcc-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      .+.+.+..++||+|+||+||+|+..      +...||||.|+..... ..++|++|+++++.++|||||+|+|+|.+++.
T Consensus       484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P  563 (774)
T KOG1026|consen  484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP  563 (774)
T ss_pred             chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence            4456677789999999999999753      3567999999976554 77899999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCC-------C----cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC
Q 005825          579 KILILEYMPNKSLDVFLFDPT-------K----KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM  647 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~-------~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~  647 (675)
                      .++|+|||..|+|.+||....       .    ...++..+.+.||.|||.||+||-+++   ++||||..+|+||.++.
T Consensus       564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l  640 (774)
T KOG1026|consen  564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENL  640 (774)
T ss_pred             eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccce
Confidence            999999999999999996311       1    334888999999999999999999987   99999999999999999


Q ss_pred             CeEEeeeccceec
Q 005825          648 NPKISDFGLARMF  660 (675)
Q Consensus       648 ~~kl~DFGla~~~  660 (675)
                      .|||+||||+|..
T Consensus       641 ~VKIsDfGLsRdi  653 (774)
T KOG1026|consen  641 VVKISDFGLSRDI  653 (774)
T ss_pred             EEEecccccchhh
Confidence            9999999999865

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2.5e-27  Score=244.94  Aligned_cols=151  Identities=30%  Similarity=0.428  Sum_probs=133.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCH-HHHHHHHHHHHhcC-CCceeeEEEEEEeCC-eEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQ-HRNLVRILGCCIEQG-EKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~-~~f~~E~~il~~l~-H~nIv~l~g~~~~~~-~~~l  581 (675)
                      ..++|.+.++||.|+||.||+|+- ..++.||||+++++-.... -.=.+|++.|++|. |||||+|.+++.+.+ .+++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            457899999999999999999974 5689999999987533322 22457999999998 999999999999988 8999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||| ..+|.+++++.  .+.+++..+..|+.||++||+|+|++|   +.|||+||||||+.....+||+||||||-+.
T Consensus        88 VfE~M-d~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~  161 (538)
T KOG0661|consen   88 VFEFM-DCNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVR  161 (538)
T ss_pred             eHHhh-hhhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccc
Confidence            99999 56899988754  678999999999999999999999998   9999999999999999999999999999875


Q ss_pred             C
Q 005825          662 G  662 (675)
Q Consensus       662 ~  662 (675)
                      .
T Consensus       162 S  162 (538)
T KOG0661|consen  162 S  162 (538)
T ss_pred             c
Confidence            4

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=3.7e-26  Score=235.91  Aligned_cols=148  Identities=30%  Similarity=0.492  Sum_probs=128.3

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--------------ccCHHHHHHHHHHHHhcCCCceeeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--------------GQGLEEFKNEMLLIAKLQHRNLVRIL  570 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--------------~~~~~~f~~E~~il~~l~H~nIv~l~  570 (675)
                      ..++|++.+.||+|.||.|-+|+. .+++.||||++.+..              ....+..++|+.+|++++|||||+|+
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li  174 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI  174 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence            458899999999999999999986 468999999996531              11245789999999999999999999


Q ss_pred             EEEEeC--CeEEEEEEecCCCCHHHHhcCCCCccc-CCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC
Q 005825          571 GCCIEQ--GEKILILEYMPNKSLDVFLFDPTKKRL-LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM  647 (675)
Q Consensus       571 g~~~~~--~~~~lV~Ey~~~gsL~~~l~~~~~~~~-l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~  647 (675)
                      .+.-+.  +..|||+||+..|.+...    ....+ +...++.++++++..||+|||.++   ||||||||+|+||+++|
T Consensus       175 EvLDDP~s~~~YlVley~s~G~v~w~----p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g  247 (576)
T KOG0585|consen  175 EVLDDPESDKLYLVLEYCSKGEVKWC----PPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDG  247 (576)
T ss_pred             EeecCcccCceEEEEEeccCCccccC----CCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCC
Confidence            998655  478999999999987432    22333 889999999999999999999998   99999999999999999


Q ss_pred             CeEEeeeccceec
Q 005825          648 NPKISDFGLARMF  660 (675)
Q Consensus       648 ~~kl~DFGla~~~  660 (675)
                      ++||+|||.+-.+
T Consensus       248 ~VKIsDFGVs~~~  260 (576)
T KOG0585|consen  248 TVKISDFGVSNEF  260 (576)
T ss_pred             cEEeeccceeeec
Confidence            9999999999877

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.5e-25  Score=239.11  Aligned_cols=161  Identities=29%  Similarity=0.474  Sum_probs=138.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc----Cc-cCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ----SG-QGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGE  578 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~----~~-~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~  578 (675)
                      ..+.|.+.+.||+|+||+|+.|+. .+++.||||.+.+.    .. ...+.+.+|+.++++++ ||||++++.++.....
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            457899999999999999999975 46899999977653    12 23456778999999999 9999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC-CCeEEeeeccc
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLA  657 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DFGla  657 (675)
                      .++||||+.+|+|.+++..   .+.+.+.+...++.|++.|++|||.++   |+||||||+|||++.+ +++||+|||++
T Consensus        95 ~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s  168 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLS  168 (370)
T ss_pred             EEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccc
Confidence            9999999999999999943   556888999999999999999999998   9999999999999999 99999999999


Q ss_pred             eecC-CCcccCCCCceecC
Q 005825          658 RMFG-GDELQGNTKRIVGT  675 (675)
Q Consensus       658 ~~~~-~~~~~~~~~~~~GT  675 (675)
                      +... .++   ...+.+||
T Consensus       169 ~~~~~~~~---~l~t~cGs  184 (370)
T KOG0583|consen  169 AISPGEDG---LLKTFCGS  184 (370)
T ss_pred             cccCCCCC---cccCCCCC
Confidence            9984 322   23345665

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.93  E-value=4.2e-26  Score=244.58  Aligned_cols=148  Identities=36%  Similarity=0.541  Sum_probs=130.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC--C---cEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN--G---EEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~--g---~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      ++..+.++||+|+||.||+|++..  +   ..||||..+..   ......+|.+|+++|++++|||||+++|++.....+
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl  236 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL  236 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence            344555899999999999998643  2   23899998852   355678999999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++|||+++||+|+++|....  ..++..+++.++.+.|+||+|||++.   +|||||.++|+|++.++.+||+||||++.
T Consensus       237 ~ivmEl~~gGsL~~~L~k~~--~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs~~  311 (474)
T KOG0194|consen  237 MLVMELCNGGSLDDYLKKNK--KSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLSRA  311 (474)
T ss_pred             EEEEEecCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccccC
Confidence            99999999999999995432  25899999999999999999999998   99999999999999999999999999885


Q ss_pred             c
Q 005825          660 F  660 (675)
Q Consensus       660 ~  660 (675)
                      -
T Consensus       312 ~  312 (474)
T KOG0194|consen  312 G  312 (474)
T ss_pred             C
Confidence            4

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.93  E-value=2e-26  Score=249.57  Aligned_cols=154  Identities=33%  Similarity=0.561  Sum_probs=137.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ......+.++||.|.||+|++|+++-    ...||||.|+... ....++|+.|+.||.+++||||++|.|+....+..+
T Consensus       627 d~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvM  706 (996)
T KOG0196|consen  627 DPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVM  706 (996)
T ss_pred             ChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeE
Confidence            34566778999999999999998742    3579999999753 445678999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||.|||+||+|+.||+..  .+.+.+.+...++++||.||+||-+.+   .+||||.++|||++.+..+||+||||+|.+
T Consensus       707 IiTEyMENGsLDsFLR~~--DGqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvl  781 (996)
T KOG0196|consen  707 IITEYMENGSLDSFLRQN--DGQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVL  781 (996)
T ss_pred             EEhhhhhCCcHHHHHhhc--CCceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeec
Confidence            999999999999999643  456899999999999999999999987   999999999999999999999999999988


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      .++.
T Consensus       782 edd~  785 (996)
T KOG0196|consen  782 EDDP  785 (996)
T ss_pred             ccCC
Confidence            6655

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.93  E-value=1.8e-26  Score=241.91  Aligned_cols=159  Identities=31%  Similarity=0.481  Sum_probs=140.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|.+.+.||+|+||.||||+- .+.+.||+|.+.+.  .....+.+++|++|+++++|||||.++++|+...+.++|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            5788889999999999999975 45889999999764  34456779999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+.| +|..+|.   ..+.+++.....|+.++..||.|||+..   |+|||+||+||||+..+++|++|||+||-+..+.
T Consensus        82 ~a~g-~L~~il~---~d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen   82 YAVG-DLFTILE---QDGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT  154 (808)
T ss_pred             hhhh-hHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence            9987 9999994   4567899999999999999999999987   9999999999999999999999999999886544


Q ss_pred             ccCCCCceecC
Q 005825          665 LQGNTKRIVGT  675 (675)
Q Consensus       665 ~~~~~~~~~GT  675 (675)
                      .  ..++|.||
T Consensus       155 ~--vltsikGt  163 (808)
T KOG0597|consen  155 S--VLTSIKGT  163 (808)
T ss_pred             e--eeeeccCc
Confidence            2  34456665

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=1.4e-26  Score=239.25  Aligned_cols=160  Identities=34%  Similarity=0.510  Sum_probs=136.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHh--cCCCceeeEEEEEEeCC----eEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAK--LQHRNLVRILGCCIEQG----EKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~--l~H~nIv~l~g~~~~~~----~~~l  581 (675)
                      ...++.++||+|.||.||||.+. ++.||||++..   +..+.|++|-+|.+.  ++|+||++++++-....    +++|
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL  285 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL  285 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence            34456678999999999999984 58999999964   455778888887765  58999999999987666    8999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc------CCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY------SRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      |+||.++|+|.+||.    ...++|....+|+..+++||+|||+.      ++++|+|||||.+||||.+|+++.|+|||
T Consensus       286 Vt~fh~kGsL~dyL~----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG  361 (534)
T KOG3653|consen  286 VTEFHPKGSLCDYLK----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG  361 (534)
T ss_pred             EeeeccCCcHHHHHH----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence            999999999999994    45789999999999999999999964      45689999999999999999999999999


Q ss_pred             cceecCCCcccCCCCceecC
Q 005825          656 LARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       656 la~~~~~~~~~~~~~~~~GT  675 (675)
                      ||.++......+.+-.-|||
T Consensus       362 LAl~~~p~~~~~d~~~qVGT  381 (534)
T KOG3653|consen  362 LALRLEPGKPQGDTHGQVGT  381 (534)
T ss_pred             eeEEecCCCCCcchhhhhhh
Confidence            99999776655555445665

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=5.2e-26  Score=240.69  Aligned_cols=160  Identities=33%  Similarity=0.491  Sum_probs=142.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ...|...++||+|+-|.||.++. .+++.||||++........+-+.+|+.+|+..+|+|||+++..+..++++|+||||
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy  351 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY  351 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence            35667778999999999999964 56889999999876555667788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCcc
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL  665 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~  665 (675)
                      |++|+|.+.+.    ...+++.++..|++++++||+|||.++   |||||||.+||||+.++.+||+|||++..+..++.
T Consensus       352 m~ggsLTDvVt----~~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~  424 (550)
T KOG0578|consen  352 MEGGSLTDVVT----KTRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS  424 (550)
T ss_pred             cCCCchhhhhh----cccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence            99999999883    345899999999999999999999998   99999999999999999999999999999987776


Q ss_pred             cCCCCceecC
Q 005825          666 QGNTKRIVGT  675 (675)
Q Consensus       666 ~~~~~~~~GT  675 (675)
                      +..  ++|||
T Consensus       425 KR~--TmVGT  432 (550)
T KOG0578|consen  425 KRS--TMVGT  432 (550)
T ss_pred             ccc--cccCC
Confidence            443  37887

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=2.3e-25  Score=228.94  Aligned_cols=150  Identities=32%  Similarity=0.488  Sum_probs=131.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC--eEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG--EKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~--~~~lV~E  584 (675)
                      .++...+.||+|+||.||++...+ |+..|||.+........+.+.+|+.+|.+++|||||+.+|......  .+++.||
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            456777899999999999998754 8999999987653333677899999999999999999999855444  6889999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-CCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-DMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DFGla~~~~~  662 (675)
                      |+++|+|.+++.....  .+++.....+..||++||+|||+++   ||||||||+||||+. ++.+||+|||+|+....
T Consensus        97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence            9999999999954322  6899999999999999999999988   999999999999999 79999999999998864

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.93  E-value=1.3e-25  Score=222.78  Aligned_cols=152  Identities=30%  Similarity=0.450  Sum_probs=128.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc-cC-HHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG-QG-LEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-~~-~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~~  580 (675)
                      ..+.|+.++.|++|+||.||+|+. ++++.||+|+++.... .+ --.-.+||.+|.+++|||||.+-.+.+..  +..|
T Consensus        74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy  153 (419)
T KOG0663|consen   74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY  153 (419)
T ss_pred             cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence            346788889999999999999986 4689999999985321 11 12457899999999999999998887644  4799


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||||||+. +|..++..-  ...+...+...+..|+++||+|||.+.   |+||||||+|+|+++.|.+||+||||||.+
T Consensus       154 ~VMe~~Eh-DLksl~d~m--~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~y  227 (419)
T KOG0663|consen  154 IVMEYVEH-DLKSLMETM--KQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREY  227 (419)
T ss_pred             eeHHHHHh-hHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhh
Confidence            99999965 777777432  246778888899999999999999998   999999999999999999999999999999


Q ss_pred             CCC
Q 005825          661 GGD  663 (675)
Q Consensus       661 ~~~  663 (675)
                      +..
T Consensus       228 gsp  230 (419)
T KOG0663|consen  228 GSP  230 (419)
T ss_pred             cCC
Confidence            765

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=9.7e-26  Score=231.35  Aligned_cols=174  Identities=29%  Similarity=0.425  Sum_probs=141.0

Q ss_pred             CCCCCCcccHHHHHHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHH--hcCCCceee
Q 005825          491 KDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIA--KLQHRNLVR  568 (675)
Q Consensus       491 ~~~~~~~~~~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~--~l~H~nIv~  568 (675)
                      ..+.+|.+-.   .....+..+.+.||+|.||+||+|++ .|+.||||++...   +.+.+.+|.+|..  .|+|+||..
T Consensus       197 SGSGlplLVQ---RTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILg  269 (513)
T KOG2052|consen  197 SGSGLPLLVQ---RTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILG  269 (513)
T ss_pred             CCCCchhHhH---HhhhheeEEEEEecCccccceeeccc-cCCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhh
Confidence            3455555433   34557889999999999999999999 5789999999753   3355666776665  469999999


Q ss_pred             EEEEEEeCC----eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHh-----cCCCceEecCCCCC
Q 005825          569 ILGCCIEQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH-----YSRFRIIHRDLKAS  639 (675)
Q Consensus       569 l~g~~~~~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-----~~~~~iiHrDlkp~  639 (675)
                      +++.-..+.    .+|||.+|.+.|||.+||.+    ..++-...++++..+|.||++||-     ++++.|.|||||+.
T Consensus       270 FIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSK  345 (513)
T KOG2052|consen  270 FIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSK  345 (513)
T ss_pred             hhhccccCCCceEEEEEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccc
Confidence            999865543    68999999999999999943    568889999999999999999994     67889999999999


Q ss_pred             CEEEcCCCCeEEeeeccceecCCC--cccCCCCceecC
Q 005825          640 NVLLDRDMNPKISDFGLARMFGGD--ELQGNTKRIVGT  675 (675)
Q Consensus       640 NILl~~~~~~kl~DFGla~~~~~~--~~~~~~~~~~GT  675 (675)
                      |||+.+++.+.|+|+|||.....+  +.....+..|||
T Consensus       346 NILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGT  383 (513)
T KOG2052|consen  346 NILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGT  383 (513)
T ss_pred             cEEEccCCcEEEeeceeeEEecccCCcccCCCCCccce
Confidence            999999999999999999888654  333344445776

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=99.93  E-value=5.5e-25  Score=195.76  Aligned_cols=113  Identities=46%  Similarity=0.790  Sum_probs=99.8

Q ss_pred             CcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCCCCeEEEe
Q 005825           33 SFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWST  112 (675)
Q Consensus        33 ~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~g~~vWss  112 (675)
                      +.|..++.|+|+++.|++|||.+... ..+.+|||+..++++||+|||+.|+.+ .+.|.|+.||+|+|++.+|.++|+|
T Consensus         2 ~~l~~~~~l~s~~~~f~~G~~~~~~q-~dgnlV~~~~~~~~~vW~snt~~~~~~-~~~l~l~~dGnLvl~~~~g~~vW~S   79 (114)
T smart00108        2 NTLSSGQTLVSGNSLFELGFFTLIMQ-NDYNLILYKSSSRTVVWVANRDNPVSD-SCTLTLQSDGNLVLYDGDGRVVWSS   79 (114)
T ss_pred             cccCCCCEEecCCCcEeeeccccCCC-CCEEEEEEECCCCcEEEECCCCCCCCC-CEEEEEeCCCCEEEEeCCCCEEEEe
Confidence            46788999999999999999998654 688999998766789999999999865 3889999999999999999999999


Q ss_pred             ccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccC
Q 005825          113 NASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDY  152 (675)
Q Consensus       113 ~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~  152 (675)
                      ++.......+|+|+|+|||||++.     .+.+|||||||
T Consensus        80 ~t~~~~~~~~~~L~ddGnlvl~~~-----~~~~~W~Sf~~  114 (114)
T smart00108       80 NTTGANGNYVLVLLDDGNLVIYDS-----DGNFLWQSFDY  114 (114)
T ss_pred             cccCCCCceEEEEeCCCCEEEECC-----CCCEEeCCCCC
Confidence            987435567899999999999986     56799999997

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.92  E-value=8.7e-26  Score=237.56  Aligned_cols=151  Identities=32%  Similarity=0.549  Sum_probs=133.9

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccC-HHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~-~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      +.....+.++||+|-||+|.+++...+..||||+++...... ..+|..|+++|.+++|||||+|+|+|..++.+++|+|
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E  615 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE  615 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence            345566779999999999999999888999999999865544 4799999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||++|+|.+|+...... .+.-...+.|+.|||.||+||.+..   ++||||.++|+|++.++++||+|||++|-+
T Consensus       616 YmEnGDLnqFl~aheap-t~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~l  687 (807)
T KOG1094|consen  616 YMENGDLNQFLSAHELP-TAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNL  687 (807)
T ss_pred             HHhcCcHHHHHHhccCc-ccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCccccccc
Confidence            99999999999654322 2445566789999999999999876   999999999999999999999999999955

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=5.1e-25  Score=237.50  Aligned_cols=162  Identities=28%  Similarity=0.406  Sum_probs=139.5

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEK  579 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~  579 (675)
                      ...++|.++.+||+|+||+|+++++. +++.+|||.+++..   ...++..+.|..|+.... ||.|++|+.+++.++++
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l  444 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL  444 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence            34579999999999999999999875 48899999999863   345677888998888775 99999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+.||++..+.    ....+++..+.-++..|+.||.|||+++   |||||||.+|||||.+|++||+||||+|.
T Consensus       445 ~fvmey~~Ggdm~~~~----~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe  517 (694)
T KOG0694|consen  445 FFVMEYVAGGDLMHHI----HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKE  517 (694)
T ss_pred             EEEEEecCCCcEEEEE----ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccc
Confidence            9999999999943333    3456888888889999999999999998   99999999999999999999999999996


Q ss_pred             cCCCcccCCCCceecC
Q 005825          660 FGGDELQGNTKRIVGT  675 (675)
Q Consensus       660 ~~~~~~~~~~~~~~GT  675 (675)
                      -...+.  .|.+++||
T Consensus       518 ~m~~g~--~TsTfCGT  531 (694)
T KOG0694|consen  518 GMGQGD--RTSTFCGT  531 (694)
T ss_pred             cCCCCC--ccccccCC
Confidence            543332  46678998

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1e-24  Score=224.01  Aligned_cols=151  Identities=25%  Similarity=0.398  Sum_probs=136.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..++|++.++||.|.-++||+|+. +.++.||||++..+. ....++++.|+..|+.++||||++++..|..+..+|+||
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm  103 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM  103 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence            457899999999999999999974 668999999997543 334689999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      .||.+||+.++++..-.. -+++..+..|.+++++||.|||.++   .||||||+.||||+.+|.|||+|||.+.-+
T Consensus       104 pfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l  176 (516)
T KOG0582|consen  104 PFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASL  176 (516)
T ss_pred             hhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeee
Confidence            999999999999754333 3888999999999999999999998   999999999999999999999999977655

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.92  E-value=1.3e-24  Score=228.27  Aligned_cols=152  Identities=31%  Similarity=0.543  Sum_probs=131.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-----------------CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-----------------GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRI  569 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-----------------g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l  569 (675)
                      ++|++.++||+|+||.||++.+.+                 +..||+|.+.... .....+|.+|+.++.+++||||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            578888999999999999997532                 3479999987642 2345679999999999999999999


Q ss_pred             EEEEEeCCeEEEEEEecCCCCHHHHhcCCC----------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEe
Q 005825          570 LGCCIEQGEKILILEYMPNKSLDVFLFDPT----------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH  633 (675)
Q Consensus       570 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH  633 (675)
                      ++++.+.+..++||||+++++|.+++....                ....+++...+.++.||+.||+|||+.+   |+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH  161 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH  161 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence            999999999999999999999999885321                1134678889999999999999999987   999


Q ss_pred             cCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          634 RDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       634 rDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||||+|||+++++.+||+|||+++.+..
T Consensus       162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~  190 (304)
T cd05096         162 RDLATRNCLVGENLTIKIADFGMSRNLYA  190 (304)
T ss_pred             cCcchhheEEcCCccEEECCCccceeccc
Confidence            99999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.92  E-value=7.8e-25  Score=233.55  Aligned_cols=154  Identities=30%  Similarity=0.446  Sum_probs=130.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE------cCCcEEEEEEecCcCc-cCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQG  577 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~  577 (675)
                      ..++|++.++||+|+||.||+|+.      .+++.||||+++.... ...+.+..|+.++.++ +||||++++++|...+
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            346889999999999999999974      2356899999975332 3346789999999999 8999999999987654


Q ss_pred             -eEEEEEEecCCCCHHHHhcCCCC--------------------------------------------------------
Q 005825          578 -EKILILEYMPNKSLDVFLFDPTK--------------------------------------------------------  600 (675)
Q Consensus       578 -~~~lV~Ey~~~gsL~~~l~~~~~--------------------------------------------------------  600 (675)
                       ..++||||+++|+|.+++.....                                                        
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence             57899999999999999853211                                                        


Q ss_pred             ---cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          601 ---KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       601 ---~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                         ...+.+.+...++.||++||+|||+++   |+||||||+|||+++++.+||+|||+|+.+..
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~  226 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYK  226 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeeccccccccc
Confidence               134778888999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=7.2e-26  Score=215.47  Aligned_cols=152  Identities=32%  Similarity=0.433  Sum_probs=134.6

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ..++|++.+.||+|-||.||.|+.+ ++-.||+|++.+.   ..+..+++.+|++|-+.|+||||.++++++.+....||
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence            3468899999999999999999864 5778999999764   23445679999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++||.++|+|...|.+. +...+++.....++.|+|.||.|+|...   ||||||||+|+|++..+.+||+|||-+..-.
T Consensus       100 ilEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen  100 ILEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             EEEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence            99999999999999642 3456788888899999999999999887   9999999999999999999999999998654

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.92  E-value=8.2e-25  Score=221.21  Aligned_cols=151  Identities=31%  Similarity=0.490  Sum_probs=127.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc-c-CHHHHHHHHHHHHhcCCCc-eeeEEEEEEeCC-----
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG-Q-GLEEFKNEMLLIAKLQHRN-LVRILGCCIEQG-----  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-~-~~~~f~~E~~il~~l~H~n-Iv~l~g~~~~~~-----  577 (675)
                      ...|...++||+|+||+||+|+. .+|+.||+|++..... + .-....+|+.++++++|+| ||+|++++...+     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            34566678899999999999975 5689999999975433 2 2234678999999999999 999999998877     


Q ss_pred             -eEEEEEEecCCCCHHHHhcCCCCc-ccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          578 -EKILILEYMPNKSLDVFLFDPTKK-RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       578 -~~~lV~Ey~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                       ..++|+||+ .-+|..++...... ..++......+..||++||+|||+++   |+||||||+||||++.|.+||+|||
T Consensus        90 ~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFG  165 (323)
T KOG0594|consen   90 GKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFG  165 (323)
T ss_pred             ceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccc
Confidence             788999999 56888888543321 34666788899999999999999998   9999999999999999999999999


Q ss_pred             cceecC
Q 005825          656 LARMFG  661 (675)
Q Consensus       656 la~~~~  661 (675)
                      +||.+.
T Consensus       166 lAra~~  171 (323)
T KOG0594|consen  166 LARAFS  171 (323)
T ss_pred             hHHHhc
Confidence            999775

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.92  E-value=1.8e-24  Score=233.28  Aligned_cols=148  Identities=25%  Similarity=0.358  Sum_probs=132.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||+||+++.. +++.||||++++..   ......++.|+.++.+++||||+++++.+.+....++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            47889999999999999999764 58899999997532   233457889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||+++|+|.+++..   ...+++.....++.|++.||+|||+++   |+||||||+|||+++++++||+|||+|+.+.
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~  152 (363)
T cd05628          81 EFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK  152 (363)
T ss_pred             cCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence            99999999999843   456889999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.92  E-value=3.8e-25  Score=234.80  Aligned_cols=151  Identities=36%  Similarity=0.606  Sum_probs=133.3

Q ss_pred             HHHHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          502 SVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       502 ~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      +-.+..+.+.+.+.||+|.||+||+|++-+  .||||.++-.  ..+..++|++|+..+++.+|.||+-+.|+|..+.. 
T Consensus       386 ~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-  462 (678)
T KOG0193|consen  386 EWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-  462 (678)
T ss_pred             ccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-
Confidence            334455677788999999999999999843  5999999854  34567899999999999999999999999998877 


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      .||+.+++|-+|..+|+..  +..++..+.+.||.|||+||.|||.+.   |||||||..||+|.+++.|||+|||||..
T Consensus       463 AIiTqwCeGsSLY~hlHv~--etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatv  537 (678)
T KOG0193|consen  463 AIITQWCEGSSLYTHLHVQ--ETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATV  537 (678)
T ss_pred             eeeehhccCchhhhhccch--hhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceee
Confidence            9999999999999999754  355888899999999999999999998   99999999999999999999999999864


Q ss_pred             c
Q 005825          660 F  660 (675)
Q Consensus       660 ~  660 (675)
                      -
T Consensus       538 k  538 (678)
T KOG0193|consen  538 K  538 (678)
T ss_pred             e
Confidence            3

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.7e-24  Score=229.04  Aligned_cols=149  Identities=26%  Similarity=0.398  Sum_probs=133.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+|+.. +++.||||+++...   ....+.+..|+.++..++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            47899999999999999999875 48899999997532   234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++++|.+++.   ....+++.....++.||+.||.|||+++   |+||||||+|||+++++.+||+|||+|+....
T Consensus        81 e~~~g~~L~~~l~---~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~  153 (333)
T cd05600          81 EYVPGGDFRTLLN---NLGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT  153 (333)
T ss_pred             eCCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence            9999999999994   3346788899999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.92  E-value=2.6e-24  Score=232.28  Aligned_cols=152  Identities=23%  Similarity=0.281  Sum_probs=134.0

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      ....++|++.++||+|+||.||+++.. +++.+|+|.+.+.   .....+.+.+|+.+++.++||||+++++++.+++..
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            334578999999999999999999875 5889999998642   223345688999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++|+|.+++..    ..+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+.
T Consensus       119 ~lv~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~  191 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMK  191 (370)
T ss_pred             EEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEeccccee
Confidence            999999999999999843    24788888999999999999999987   99999999999999999999999999998


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      +..
T Consensus       192 ~~~  194 (370)
T cd05621         192 MDE  194 (370)
T ss_pred             ccc
Confidence            753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.7e-24  Score=233.10  Aligned_cols=147  Identities=27%  Similarity=0.357  Sum_probs=131.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+++. .+++.||||++.+.   .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            4788999999999999999976 46899999998643   2234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||+++|+|.+++..   ...+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+
T Consensus        81 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~  151 (377)
T cd05629          81 EFLPGGDLMTMLIK---YDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGF  151 (377)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccc
Confidence            99999999999843   346788888899999999999999987   999999999999999999999999999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.91  E-value=3.3e-24  Score=232.71  Aligned_cols=146  Identities=23%  Similarity=0.343  Sum_probs=130.6

Q ss_pred             CcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .|+..++||+|+||+||+|+. .+++.||||++....   ....+.+..|+.++++++||||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            588899999999999999976 458899999997532   2345678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |+++|+|.+++..   ...+++.....++.||+.||+|||+.+   |+||||||+|||++.++++||+|||+++.+
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~  151 (381)
T cd05626          82 YIPGGDMMSLLIR---MEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGF  151 (381)
T ss_pred             cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccc
Confidence            9999999999843   345788888889999999999999987   999999999999999999999999998755

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.4e-24  Score=232.33  Aligned_cols=148  Identities=25%  Similarity=0.367  Sum_probs=132.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||+||+++.. +++.||||+++...   ......+..|+.++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            47899999999999999999874 58999999997531   234466889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||+++|+|.+++..   ...+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.+.
T Consensus        81 E~~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  152 (364)
T cd05599          81 EYLPGGDMMTLLMK---KDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK  152 (364)
T ss_pred             CCCCCcHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecc
Confidence            99999999999853   346889999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.91  E-value=3.8e-24  Score=227.51  Aligned_cols=149  Identities=26%  Similarity=0.376  Sum_probs=133.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.+.||+|+||.||+|+.. +++.||||.++..   .....+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            67899999999999999999875 5889999998753   2234567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++++|.+++..   ...+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.+..
T Consensus        98 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  170 (329)
T PTZ00263         98 EFVVGGELFTHLRK---AGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD  170 (329)
T ss_pred             cCCCCChHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence            99999999999843   345788888899999999999999987   99999999999999999999999999998754

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.91  E-value=4.1e-24  Score=228.18  Aligned_cols=150  Identities=27%  Similarity=0.376  Sum_probs=132.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC--CcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN--GEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~--g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|++.+.||+|+||.||+|+...  +..||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            3579999999999999999997643  368999998643   22345678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++|+|.+++..   ...+++.....++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus       109 v~Ey~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~  182 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRR---NKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVD  182 (340)
T ss_pred             EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence            9999999999999843   346888999999999999999999987   9999999999999999999999999998774


Q ss_pred             C
Q 005825          662 G  662 (675)
Q Consensus       662 ~  662 (675)
                      .
T Consensus       183 ~  183 (340)
T PTZ00426        183 T  183 (340)
T ss_pred             C
Confidence            3

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.91  E-value=9.6e-24  Score=219.64  Aligned_cols=150  Identities=28%  Similarity=0.350  Sum_probs=131.4

Q ss_pred             CcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .|+..+.||+|+||.||++.. .+++.||||.+....   ......+.+|+.++.+++|+||+++++++.+.+..++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            377889999999999999986 468999999987432   2234568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |+++|+|..++... ....+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus        81 ~~~~g~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~  154 (285)
T cd05631          81 IMNGGDLKFHIYNM-GNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPE  154 (285)
T ss_pred             ecCCCcHHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence            99999998887532 2335889999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.91  E-value=5.5e-24  Score=230.53  Aligned_cols=147  Identities=24%  Similarity=0.370  Sum_probs=130.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+++.. +++.||||.+.+..   ....+.+.+|++++++++||||+++++.+.+++..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            36899999999999999999864 58899999987532   234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||+++|+|.+++..   ...+++.....++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|..+
T Consensus        81 E~~~~g~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~  151 (376)
T cd05598          81 DYIPGGDMMSLLIR---LGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (376)
T ss_pred             eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccc
Confidence            99999999999843   346788888889999999999999987   999999999999999999999999998644

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=1.4e-24  Score=232.26  Aligned_cols=151  Identities=28%  Similarity=0.448  Sum_probs=136.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      +-|++.+.||+|+-|.|..|+. .+|+.+|||++.+.   .......+.+|+.+|+.+.|||+++|++++.++.++|+|.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            5678889999999999999975 57999999999764   2233567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++|.|.+++   .+.+.+.+++..+++.||..|+.|+|+.+   |+||||||+|+|||..+++||+|||||.+-.++
T Consensus        92 Eyv~gGELFdyl---v~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g  165 (786)
T KOG0588|consen   92 EYVPGGELFDYL---VRKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG  165 (786)
T ss_pred             EecCCchhHHHH---HhhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence            999999999999   45677899999999999999999999987   999999999999999999999999999986554


Q ss_pred             c
Q 005825          664 E  664 (675)
Q Consensus       664 ~  664 (675)
                      .
T Consensus       166 k  166 (786)
T KOG0588|consen  166 K  166 (786)
T ss_pred             c
Confidence            4

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.91  E-value=4.4e-24  Score=231.83  Aligned_cols=146  Identities=25%  Similarity=0.393  Sum_probs=130.1

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .|+..++||+|+||.||+|+.. +++.||||.+.+..   ....+.+.+|+.++++++||||+++++.+.+++..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            5888999999999999999864 58899999997532   2335678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |+++|+|.+++..   ...+++.....++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+
T Consensus        82 ~~~gg~L~~~l~~---~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~  151 (382)
T cd05625          82 YIPGGDMMSLLIR---MGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF  151 (382)
T ss_pred             CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence            9999999999843   345788888889999999999999987   999999999999999999999999998654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.91  E-value=5.8e-24  Score=225.51  Aligned_cols=141  Identities=27%  Similarity=0.330  Sum_probs=125.9

Q ss_pred             eeeCCcCceeEEEEEE-cCCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCC
Q 005825          514 CKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNK  589 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g  589 (675)
                      +.||+|+||.||+++. .+++.||||+++...   ......+..|+.++++++||||+++++++...+..++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999986 468999999997532   233457888999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          590 SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       590 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +|..++.   ....+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+..
T Consensus        81 ~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~  145 (323)
T cd05571          81 ELFFHLS---RERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             cHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence            9999884   3456889999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.8e-24  Score=224.38  Aligned_cols=149  Identities=25%  Similarity=0.354  Sum_probs=132.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+++.. +++.||+|.+....   ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            46888999999999999999875 58999999986432   233467889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++++|.+++..   ...+++.....++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+++.+..
T Consensus        81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~  153 (291)
T cd05612          81 EYVPGGELFSYLRN---SGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD  153 (291)
T ss_pred             eCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence            99999999999843   346888899999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.7e-24  Score=247.68  Aligned_cols=151  Identities=38%  Similarity=0.648  Sum_probs=134.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC--Cc----EEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN--GE----EVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~--g~----~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      ..+..+.+.||+|.||.||+|.+.+  +.    .||||.+++. +.+...+|.+|..+|++++|||||+++|+|.+....
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            3455677899999999999998754  33    4999999865 456678999999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCC----CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          580 ILILEYMPNKSLDVFLFDPT----KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      +|++|||++|+|..||.+.+    ....+.-.+.+.++.+||+|+.||++++   +|||||.++|+||++...|||+|||
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG  847 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG  847 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence            99999999999999997542    1456888999999999999999999998   9999999999999999999999999


Q ss_pred             cceec
Q 005825          656 LARMF  660 (675)
Q Consensus       656 la~~~  660 (675)
                      |||.+
T Consensus       848 lArDi  852 (1025)
T KOG1095|consen  848 LARDI  852 (1025)
T ss_pred             hhHhh
Confidence            99944

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.91  E-value=9.4e-24  Score=235.59  Aligned_cols=152  Identities=18%  Similarity=0.220  Sum_probs=133.2

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-C-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-N-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .|.+.+.||+|+||.||++... + ++.||+|.+..........++.|+.++++++||||+++++++...+..+|||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            4889999999999999999753 3 6788999876544445567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          587 PNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       587 ~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ++|+|.+++... .....+++.+...++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~  222 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS  222 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence            999999988542 23446888899999999999999999987   999999999999999999999999999987543

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.91  E-value=8.7e-24  Score=224.61  Aligned_cols=141  Identities=28%  Similarity=0.328  Sum_probs=126.2

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNK  589 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g  589 (675)
                      +.||+|+||.||+++.. +++.||||.+++.   .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            36999999999999864 5899999999753   2334567889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          590 SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       590 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +|..++..   ...+++.+...++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~  145 (328)
T cd05593          81 ELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (328)
T ss_pred             CHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccC
Confidence            99988843   346889999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.91  E-value=1.7e-24  Score=234.05  Aligned_cols=160  Identities=32%  Similarity=0.489  Sum_probs=137.5

Q ss_pred             cceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC------eEEE
Q 005825          510 FSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKIL  581 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~------~~~l  581 (675)
                      +...+.||+|+||.||+|+. ..|+.||||..+... ....+....|+++|++++|+|||++++.-.+..      ...+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            44557899999999999985 569999999998643 345677889999999999999999999865443      5789


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc--CCC--CeEEeeeccc
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD--RDM--NPKISDFGLA  657 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~--~~~--~~kl~DFGla  657 (675)
                      ||||+++|||...|.+++....|++.+.+.+..+++.||.|||+++   |+||||||.||++-  ++|  .-||+|||.|
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence            9999999999999998888888999999999999999999999987   99999999999983  333  4699999999


Q ss_pred             eecCCCcccCCCCceecC
Q 005825          658 RMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       658 ~~~~~~~~~~~~~~~~GT  675 (675)
                      |-+..++   ..+.++||
T Consensus       172 rel~d~s---~~~S~vGT  186 (732)
T KOG4250|consen  172 RELDDNS---LFTSLVGT  186 (732)
T ss_pred             ccCCCCC---eeeeecCc
Confidence            9997766   35568887

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=9.9e-24  Score=222.55  Aligned_cols=140  Identities=23%  Similarity=0.285  Sum_probs=125.3

Q ss_pred             eCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCH
Q 005825          516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL  591 (675)
Q Consensus       516 IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL  591 (675)
                      ||+|+||.||+++.. +++.||+|.++..   .......+..|+.++.+++||||+++++++.+.+..++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            799999999999875 4889999998753   233456788999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          592 DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       592 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      .+++..   ...+++..+..++.|++.||.|||+++   |+||||||+|||++.++.+||+|||+++...
T Consensus        81 ~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~  144 (312)
T cd05585          81 FHHLQR---EGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNM  144 (312)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCc
Confidence            999843   345889999999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.91  E-value=8.2e-24  Score=224.32  Aligned_cols=141  Identities=26%  Similarity=0.321  Sum_probs=125.7

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNK  589 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g  589 (675)
                      +.||+|+||.||+++.. +++.||+|.++..   .......+..|+.++++++||||+++++++...+..++||||++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            36999999999999864 5899999999753   2234556788999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          590 SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       590 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +|..++..   ...+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  145 (323)
T cd05595          81 ELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             cHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence            99988843   346889999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.91  E-value=9.8e-24  Score=224.34  Aligned_cols=151  Identities=22%  Similarity=0.330  Sum_probs=134.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+++.. +++.||||+++...   ....+.+..|+.+++.++||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            47889999999999999999864 58899999997532   234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++++|.+++...  ...+++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+..+
T Consensus        81 e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  155 (330)
T cd05601          81 EYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN  155 (330)
T ss_pred             CCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence            999999999998542  246889999999999999999999987   999999999999999999999999999887543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.91  E-value=1.6e-23  Score=222.99  Aligned_cols=151  Identities=21%  Similarity=0.276  Sum_probs=132.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+++.. +++.||+|.+.+.   .....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            47899999999999999999875 5788999998752   2223456888999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++|+|.+++...  ...+++.....++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+..+
T Consensus        81 Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  155 (331)
T cd05624          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD  155 (331)
T ss_pred             eCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence            999999999999542  345788888999999999999999987   999999999999999999999999999877544

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.91  E-value=1.1e-23  Score=227.48  Aligned_cols=154  Identities=23%  Similarity=0.277  Sum_probs=134.6

Q ss_pred             HHHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          503 VAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       503 ~~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      +....++|++.+.||+|+||.||+++.. +++.+|+|.+.+.   .....+.+.+|+.+++.++||||+++++.+.+++.
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  117 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            3445689999999999999999999875 5889999998642   22334568899999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++||||+++|+|.+++..    ..++...+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+
T Consensus       118 ~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~  190 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCM  190 (371)
T ss_pred             EEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence            9999999999999999843    24678888889999999999999987   9999999999999999999999999999


Q ss_pred             ecCCC
Q 005825          659 MFGGD  663 (675)
Q Consensus       659 ~~~~~  663 (675)
                      .+...
T Consensus       191 ~~~~~  195 (371)
T cd05622         191 KMNKE  195 (371)
T ss_pred             EcCcC
Confidence            87543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.91  E-value=8.4e-24  Score=228.48  Aligned_cols=151  Identities=24%  Similarity=0.294  Sum_probs=132.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ..++|++.++||+|+||.||+++.. +++.||+|.+++.   .....+.+..|+.+++.++||||+++++++.+.+..++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            4568999999999999999999864 5889999999642   22334567899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++|+|.+++..    ..++......++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.+.
T Consensus       121 v~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~  193 (370)
T cd05596         121 VMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD  193 (370)
T ss_pred             EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence            9999999999998843    24677888889999999999999987   9999999999999999999999999998775


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       194 ~~  195 (370)
T cd05596         194 AN  195 (370)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.7e-23  Score=222.74  Aligned_cols=150  Identities=21%  Similarity=0.302  Sum_probs=132.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.+.||+|+||.||+++.. +++.||||.+.+.   .....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            47899999999999999999864 5889999998742   2234466889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++++|.+++..  ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus        81 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  154 (331)
T cd05597          81 DYYVGGDLLTLLSK--FEDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA  154 (331)
T ss_pred             ecCCCCcHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence            99999999999843  2345788889999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.91  E-value=8.7e-24  Score=228.79  Aligned_cols=153  Identities=32%  Similarity=0.446  Sum_probs=131.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE------cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~  578 (675)
                      .++|++.++||+|+||.||+|+.      .++..||||+++... ....+.+.+|+.++..+ +||||++++++|.+.+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            45788899999999999999963      235689999997532 23456788999999999 89999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCC-----------------------------------------------------------
Q 005825          579 KILILEYMPNKSLDVFLFDPT-----------------------------------------------------------  599 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~-----------------------------------------------------------  599 (675)
                      .++||||+++|+|.+++....                                                           
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            999999999999999885321                                                           


Q ss_pred             -------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          600 -------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       600 -------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                                   ....+++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~  266 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRN  266 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccC
Confidence                         0124788899999999999999999987   99999999999999999999999999987644

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.91  E-value=1.8e-24  Score=218.35  Aligned_cols=149  Identities=33%  Similarity=0.466  Sum_probs=120.1

Q ss_pred             CcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe-----EEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE-----KILI  582 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~-----~~lV  582 (675)
                      .|...+++|.|+||.||+|.+.+ ++.||||+.-.+..    .-..|+.+|++++|||||+|+-+|....+     ..+|
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV  100 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV  100 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence            46667899999999999998754 78999999865432    22368999999999999999999875432     3589


Q ss_pred             EEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC-CCeEEeeeccceec
Q 005825          583 LEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLARMF  660 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DFGla~~~  660 (675)
                      |||||. +|..++++. .....++.....-+..||.+||+|||+.+   |+||||||+|+|+|.+ |.+||+|||-|+.+
T Consensus       101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen  101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence            999975 677777532 12344566666678999999999999977   9999999999999976 89999999999999


Q ss_pred             CCCcc
Q 005825          661 GGDEL  665 (675)
Q Consensus       661 ~~~~~  665 (675)
                      ..++.
T Consensus       177 ~~~ep  181 (364)
T KOG0658|consen  177 VKGEP  181 (364)
T ss_pred             ccCCC
Confidence            76653

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=9.4e-24  Score=226.25  Aligned_cols=150  Identities=26%  Similarity=0.415  Sum_probs=134.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+|+.. +++.||||+++...   ....+.+..|+.++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            47899999999999999999875 58999999997532   244567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++++|.+++..   ...+++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+...
T Consensus        81 e~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          81 EYMPGGDLMNLLIR---KDVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence            99999999999854   256888999999999999999999987   999999999999999999999999999877543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.90  E-value=2.3e-23  Score=221.10  Aligned_cols=142  Identities=26%  Similarity=0.310  Sum_probs=125.3

Q ss_pred             eeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCC
Q 005825          514 CKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNK  589 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g  589 (675)
                      +.||+|+||.||+++. .+++.||+|.++..   ......++..|++++..++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            3699999999999986 46899999999753   2234567788999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHh-cCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          590 SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH-YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       590 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +|..++.   ....+++.....++.||+.||+|||+ .+   |+||||||+|||+++++.+||+|||+++...
T Consensus        81 ~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~  147 (325)
T cd05594          81 ELFFHLS---RERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGI  147 (325)
T ss_pred             cHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecC
Confidence            9998884   33468899999999999999999997 55   9999999999999999999999999998643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.90  E-value=1.9e-23  Score=222.27  Aligned_cols=148  Identities=26%  Similarity=0.361  Sum_probs=129.8

Q ss_pred             CcceeeeeCCcCceeEEEEEE----cCCcEEEEEEecCc----CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeE
Q 005825          509 NFSMECKLGEGGFGPVYKGRL----LNGEEVAVKRLSSQ----SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~----~~g~~vAvK~l~~~----~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~  579 (675)
                      +|++.++||+|+||.||+++.    .+++.||+|++.+.    .....+.+..|+.++.++ +||||+++++++...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            478899999999999999975    35789999998642    122345688899999999 599999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++|+|.+++..   ...+++.+...++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.
T Consensus        81 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~  154 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQ---RDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE  154 (332)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence            999999999999999843   345888999999999999999999987   99999999999999999999999999987


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      +..
T Consensus       155 ~~~  157 (332)
T cd05614         155 FLS  157 (332)
T ss_pred             ccc
Confidence            643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.90  E-value=1.9e-23  Score=224.93  Aligned_cols=148  Identities=25%  Similarity=0.371  Sum_probs=132.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|+..+.||+|+||.||+++.. +++.||||.++..   .....+.+..|+.++..++||||+++++.+.+.+..++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            46888999999999999999865 5889999999743   2334567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||+++|+|.+++..   ...+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus        81 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~  152 (360)
T cd05627          81 EFLPGGDMMTLLMK---KDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK  152 (360)
T ss_pred             eCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence            99999999999843   346888899999999999999999987   9999999999999999999999999998664

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.90  E-value=9.3e-24  Score=219.51  Aligned_cols=154  Identities=31%  Similarity=0.486  Sum_probs=131.7

Q ss_pred             eeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCC
Q 005825          514 CKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKS  590 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs  590 (675)
                      +.||.|-||+||-|+. ++|+.||||.+.+.  .......+++|+.||.+++||.||.|...|+..+..++|||-+.|--
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDM  649 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDM  649 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchH
Confidence            7899999999999976 46999999999764  34556789999999999999999999999999999999999997666


Q ss_pred             HHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEeeeccceecCCCcccC
Q 005825          591 LDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGLARMFGGDELQG  667 (675)
Q Consensus       591 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DFGla~~~~~~~~~~  667 (675)
                      |+-+|..  ..+.++++....++.||+.||.|||.++   |+|+||||+||||..   --++||+|||+||++++...+ 
T Consensus       650 LEMILSs--EkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR-  723 (888)
T KOG4236|consen  650 LEMILSS--EKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR-  723 (888)
T ss_pred             HHHHHHh--hcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhhhh-
Confidence            6655543  3456888888888999999999999998   999999999999954   347999999999999877654 


Q ss_pred             CCCceecC
Q 005825          668 NTKRIVGT  675 (675)
Q Consensus       668 ~~~~~~GT  675 (675)
                        +.+|||
T Consensus       724 --rsVVGT  729 (888)
T KOG4236|consen  724 --RSVVGT  729 (888)
T ss_pred             --hhhcCC
Confidence              346777

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.90  E-value=3e-23  Score=216.24  Aligned_cols=148  Identities=30%  Similarity=0.438  Sum_probs=129.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.++||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            57899999999999999999864 58899999987532 23345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++ +|.+++...  ...+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++...
T Consensus        85 ~~~-~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~  154 (288)
T cd07871          85 LDS-DLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKS  154 (288)
T ss_pred             CCc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence            985 898887432  335788899999999999999999987   9999999999999999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.90  E-value=7e-24  Score=235.66  Aligned_cols=150  Identities=32%  Similarity=0.474  Sum_probs=132.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCC-cEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEE-Ee------CC
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNG-EEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCC-IE------QG  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g-~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~-~~------~~  577 (675)
                      .-+.++.+.|.+|||+.||++....+ ..+|+|++-.......+..++||++|++|+ |+|||.+++.. ..      .-
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            45677889999999999999998765 999999998777888899999999999998 99999999943 21      13


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      +.+|.||||++|+|-+++...... .|.+.+.++|+.++++|+++||.. +++|||||||.|||||+.+++.||||||-|
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa  193 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA  193 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence            678999999999999999654333 399999999999999999999987 578999999999999999999999999987


Q ss_pred             e
Q 005825          658 R  658 (675)
Q Consensus       658 ~  658 (675)
                      .
T Consensus       194 t  194 (738)
T KOG1989|consen  194 T  194 (738)
T ss_pred             c
Confidence            4

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.90  E-value=3.8e-23  Score=219.99  Aligned_cols=150  Identities=25%  Similarity=0.327  Sum_probs=133.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||.||+++.. ++..+|+|.+.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            468999999999999999999875 58899999987542 2335679999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |+++++|.+++..   ...+++.....++.|++.||+|||+.+  .|+||||||+|||+++++.+||+|||+++.+.
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  155 (331)
T cd06649          84 HMDGGSLDQVLKE---AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (331)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence            9999999999843   345788999999999999999999864  49999999999999999999999999998764

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.90  E-value=3e-23  Score=220.90  Aligned_cols=150  Identities=20%  Similarity=0.277  Sum_probs=131.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+++... ++.+|+|.+.+.   .....+.+..|+.++..++|+||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            478899999999999999998754 788999998642   1223456889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++|+|.+++...  ...+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus        81 ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~  154 (332)
T cd05623          81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLME  154 (332)
T ss_pred             eccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence            999999999999532  345788888999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.90  E-value=2.5e-23  Score=220.66  Aligned_cols=141  Identities=30%  Similarity=0.414  Sum_probs=124.5

Q ss_pred             eeeCCcCceeEEEEEE----cCCcEEEEEEecCc----CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          514 CKLGEGGFGPVYKGRL----LNGEEVAVKRLSSQ----SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~----~~g~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++||+|+||.||+++.    ..++.||||.++..    .......+..|+.++++++||||+++++++..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            6899999999999975    35789999998753    123345678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +++++|.+++.   ....+.+.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        82 ~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  150 (323)
T cd05584          82 LSGGELFMHLE---REGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKES  150 (323)
T ss_pred             CCCchHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence            99999999984   3445778888889999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.90  E-value=2.5e-23  Score=222.10  Aligned_cols=161  Identities=30%  Similarity=0.478  Sum_probs=140.2

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCcc---CHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQ---GLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEK  579 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~---~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~  579 (675)
                      .....|++.+.||+|.||.||+++.+. |+.+|+|.+.+....   ..+.+.+|+.+|+++. |||||.+.+.+......
T Consensus        32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~  111 (382)
T KOG0032|consen   32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV  111 (382)
T ss_pred             cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence            345788999999999999999998765 999999999865432   3468999999999998 99999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC----CCeEEeeec
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD----MNPKISDFG  655 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~----~~~kl~DFG  655 (675)
                      ++|||++.||.|.+.+...    .+++.+...++.||+.|++|||+.+   |+||||||+|+|+...    +.+|++|||
T Consensus       112 ~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFG  184 (382)
T KOG0032|consen  112 YLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFG  184 (382)
T ss_pred             EEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence            9999999999999998543    2899999999999999999999987   9999999999999543    479999999


Q ss_pred             cceecCCCcccCCCCceecC
Q 005825          656 LARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       656 la~~~~~~~~~~~~~~~~GT  675 (675)
                      +|+.....+   ....++||
T Consensus       185 la~~~~~~~---~~~~~~Gt  201 (382)
T KOG0032|consen  185 LAKFIKPGE---RLHTIVGT  201 (382)
T ss_pred             CceEccCCc---eEeeecCC
Confidence            999997632   34456776

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.90  E-value=3e-23  Score=225.87  Aligned_cols=154  Identities=31%  Similarity=0.440  Sum_probs=131.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC------CcEEEEEEecCcCc-cCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCC
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQG  577 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~  577 (675)
                      ..++|++.++||+|+||.||+|+...      +..||||+++.... ...+.|.+|+.+++++. ||||++++++|.+.+
T Consensus        35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~  114 (400)
T cd05105          35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG  114 (400)
T ss_pred             cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence            35688899999999999999997521      34799999975432 33467999999999996 999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhcCCC----------------------------------------------------------
Q 005825          578 EKILILEYMPNKSLDVFLFDPT----------------------------------------------------------  599 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~----------------------------------------------------------  599 (675)
                      ..+|||||+++|+|.+++....                                                          
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (400)
T cd05105         115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI  194 (400)
T ss_pred             ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence            9999999999999998875321                                                          


Q ss_pred             -----------------------------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc
Q 005825          600 -----------------------------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD  644 (675)
Q Consensus       600 -----------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~  644 (675)
                                                         ....+++.++..++.||++||+|||+.+   |+||||||+|||++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~  271 (400)
T cd05105         195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLA  271 (400)
T ss_pred             hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEe
Confidence                                               0124778888999999999999999987   99999999999999


Q ss_pred             CCCCeEEeeeccceecCC
Q 005825          645 RDMNPKISDFGLARMFGG  662 (675)
Q Consensus       645 ~~~~~kl~DFGla~~~~~  662 (675)
                      +++.+||+|||+++.+..
T Consensus       272 ~~~~~kL~DfGla~~~~~  289 (400)
T cd05105         272 QGKIVKICDFGLARDIMH  289 (400)
T ss_pred             CCCEEEEEeCCcceeccc
Confidence            999999999999987643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.90  E-value=3.8e-24  Score=225.43  Aligned_cols=163  Identities=26%  Similarity=0.440  Sum_probs=141.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe-EEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE-KILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~-~~lV  582 (675)
                      .++|...+++|+|+||.++..+. .+++.+++|.+...  .....+..++|+.++++++|||||.+.+.+++++. .+||
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence            35788889999999999999965 45789999998743  23334567899999999999999999999999998 9999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||++||+|.+.+...+ ...++++....++.|++.|+.|||++.   |+|||||+.||+++++..|||.|||+||.++.
T Consensus        83 m~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~  158 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNP  158 (426)
T ss_pred             EeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCC
Confidence            99999999999996543 567888999999999999999999877   99999999999999999999999999999987


Q ss_pred             CcccCCCCceecC
Q 005825          663 DELQGNTKRIVGT  675 (675)
Q Consensus       663 ~~~~~~~~~~~GT  675 (675)
                      +...  ..+++||
T Consensus       159 ~~~~--a~tvvGT  169 (426)
T KOG0589|consen  159 EDSL--ASTVVGT  169 (426)
T ss_pred             chhh--hheecCC
Confidence            7632  3447777

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.90  E-value=3.9e-23  Score=219.23  Aligned_cols=146  Identities=27%  Similarity=0.361  Sum_probs=127.8

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCC-CceeeEEEEEEeCCeEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH-RNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H-~nIv~l~g~~~~~~~~~lV~  583 (675)
                      +|++.+.||+|+||.||+|+.. +++.||||++++.   .....+.+..|+.++..+.| ++|+++++++.+.+..++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            5788999999999999999875 4789999999753   23345678889999999976 46888999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||+++|+|..++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05587          81 EYVNGGDLMYHIQQ---VGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKEN  151 (324)
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence            99999999998843   345788999999999999999999987   999999999999999999999999999754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.90  E-value=1.7e-23  Score=226.34  Aligned_cols=153  Identities=34%  Similarity=0.497  Sum_probs=130.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~  578 (675)
                      .++|++.+.||+|+||.||+++..      +++.||||+++... ....+.+.+|+.+++++ +|+||++++++|.+.+.
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~  116 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP  116 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence            457889999999999999998742      24579999997543 23345788999999999 89999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCC-----------------------------------------------------------
Q 005825          579 KILILEYMPNKSLDVFLFDPT-----------------------------------------------------------  599 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~-----------------------------------------------------------  599 (675)
                      .++||||+++|+|.+++....                                                           
T Consensus       117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (374)
T cd05106         117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD  196 (374)
T ss_pred             eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence            999999999999999885321                                                           


Q ss_pred             --------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          600 --------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       600 --------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                              ....+++.+.+.|+.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~  264 (374)
T cd05106         197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMN  264 (374)
T ss_pred             ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence                    1124778889999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.90  E-value=5e-23  Score=218.30  Aligned_cols=147  Identities=27%  Similarity=0.346  Sum_probs=127.9

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      +|++.+.||+|+||.||+|+.. +++.||||.+++..   ....+.+..|..++..+ +|++|+++++++.+.+..++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            5788899999999999999875 47899999987532   22345577788888777 5899999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||+++|+|..++..   ...+++.++..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++...
T Consensus        81 E~~~~g~L~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~  152 (323)
T cd05616          81 EYVNGGDLMYQIQQ---VGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENM  152 (323)
T ss_pred             cCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence            99999999988843   345888999999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.90  E-value=4e-23  Score=214.87  Aligned_cols=149  Identities=25%  Similarity=0.398  Sum_probs=131.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|++.+.||+|+||.||+++.. +++.||||+++...  ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            46899999999999999999875 58899999987532  3345678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |++++.+..+..   ....+++..+..++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||+|+.+..
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  152 (287)
T cd07848          81 YVEKNMLELLEE---MPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSE  152 (287)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence            999988776542   2345888899999999999999999987   99999999999999999999999999988743

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.90  E-value=3.2e-23  Score=213.31  Aligned_cols=149  Identities=30%  Similarity=0.475  Sum_probs=131.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc----CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|++.+.||+|+||.||+|.+.    .+..||+|.++... ....+.|.+|+.++.+++||||+++++++..++..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            457889999999999999999753    36689999998643 2334679999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||||+++|+|++++...  ...+++.+++.++.|++.||+|||+++   ++||||||+|||++.++.+|++|||++...
T Consensus        84 v~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~  157 (266)
T cd05064          84 VTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQED  157 (266)
T ss_pred             EEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccc
Confidence            99999999999998542  346889999999999999999999987   999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.90  E-value=3.4e-23  Score=219.06  Aligned_cols=144  Identities=28%  Similarity=0.345  Sum_probs=126.7

Q ss_pred             eeeCCcCceeEEEEEE----cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          514 CKLGEGGFGPVYKGRL----LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      +.||+|+||.||+++.    .+++.||+|+++...  ......+..|+.++++++||||+++++++.+.+..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5799999999999975    357899999997532  2234567789999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++|.+++..   ...+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.....
T Consensus        82 ~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  151 (318)
T cd05582          82 GGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDH  151 (318)
T ss_pred             CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCC
Confidence            9999999843   346889999999999999999999987   999999999999999999999999999876433

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.90  E-value=1.5e-23  Score=213.93  Aligned_cols=149  Identities=26%  Similarity=0.329  Sum_probs=133.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++++.||+|.-|+||++++.+ +..+|+|++.+..   .....+.+.|-+||+.++||.++.|++.++..+..++||
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            567788999999999999999866 5899999998653   345567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||++||+|..+++. +..+.+++..+.-++..|+.||+|||-.|   ||.|||||+||||.++|++-|+||-|+...
T Consensus       157 eyCpGGdL~~Lrqk-Qp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQK-QPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRC  229 (459)
T ss_pred             ecCCCccHHHHHhh-CCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccC
Confidence            99999999998865 34567888888888889999999999998   999999999999999999999999998765

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.90  E-value=6.8e-23  Score=215.15  Aligned_cols=149  Identities=30%  Similarity=0.412  Sum_probs=129.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||.||+|+.. +++.||||.++.... .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            468999999999999999999875 688999999875432 234567889999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |++ ++|.+++..  ....+++..+..++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+|+...
T Consensus        84 ~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  154 (303)
T cd07869          84 YVH-TDLCQYMDK--HPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKS  154 (303)
T ss_pred             CCC-cCHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence            996 577777643  2345788889999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=5.5e-23  Score=223.45  Aligned_cols=142  Identities=23%  Similarity=0.315  Sum_probs=126.4

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ..++|++.++||+|+||.||+++.. +++.||+|....      ..+.+|+.++++++||||+++++++......++|+|
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e  163 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP  163 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence            3468999999999999999999864 588999997542      456789999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++. ++|..++..   ...+++.+.+.|+.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+..
T Consensus       164 ~~~-~~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        164 RYK-TDLYCYLAA---KRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFP  232 (391)
T ss_pred             cCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence            985 688888743   345789999999999999999999987   999999999999999999999999999764

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.90  E-value=4.9e-23  Score=218.96  Aligned_cols=141  Identities=26%  Similarity=0.364  Sum_probs=124.4

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.||+|+||.||+++.. +++.||+|.+++.   .....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46999999999999864 5789999999753   223445678899888877 799999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++|..++..   ...+++.....++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~  146 (329)
T cd05618          81 GDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  146 (329)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence            999988843   346889999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.90  E-value=4.5e-23  Score=218.75  Aligned_cols=144  Identities=28%  Similarity=0.424  Sum_probs=125.4

Q ss_pred             cceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHH---HhcCCCceeeEEEEEEeCCeEEEE
Q 005825          510 FSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLI---AKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il---~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      |++.+.||+|+||.||+++.. +++.||||.+++..   ....+.+..|+.++   ++++||||+++++++..++..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            677899999999999999864 58999999997532   23345677776655   567899999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |||+++++|..++..    ..+++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589          81 MEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEG  151 (324)
T ss_pred             EcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence            999999999988742    35899999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.90  E-value=2.3e-23  Score=223.67  Aligned_cols=145  Identities=28%  Similarity=0.427  Sum_probs=126.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|+..++||+|+||.||+++.. +++.||||.+..... ...+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            45667789999999999999864 589999999975432 3356789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|....       ...+.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.+..
T Consensus       154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~  220 (353)
T PLN00034        154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQ  220 (353)
T ss_pred             CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccc
Confidence            9999986432       3456777889999999999999987   99999999999999999999999999987743

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.1e-23  Score=212.37  Aligned_cols=150  Identities=29%  Similarity=0.462  Sum_probs=130.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecC--cCccCHHHHHHHHHHHHhcCCCceeeEEEEEEe-----CCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE-----QGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~-----~~~  578 (675)
                      ...|...+.||+|+||.|..+.. .+|+.||||++..  ......++..+|+++|+.++|+||+.+.+.+..     -+.
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            45566678999999999999976 4689999999973  345567788999999999999999999999865     347


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .|+|+|+| ..+|...++   .+..++......+..|+++||+|+|+.+   |+||||||.|+|++.+..+||+||||||
T Consensus       101 vYiV~elM-etDL~~iik---~~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR  173 (359)
T KOG0660|consen  101 VYLVFELM-ETDLHQIIK---SQQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLAR  173 (359)
T ss_pred             eEEehhHH-hhHHHHHHH---cCccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecccccee
Confidence            89999999 778888884   3444888888899999999999999987   9999999999999999999999999999


Q ss_pred             ecCCC
Q 005825          659 MFGGD  663 (675)
Q Consensus       659 ~~~~~  663 (675)
                      .+...
T Consensus       174 ~~~~~  178 (359)
T KOG0660|consen  174 YLDKF  178 (359)
T ss_pred             ecccc
Confidence            99643

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.90  E-value=4.7e-23  Score=218.31  Aligned_cols=141  Identities=26%  Similarity=0.368  Sum_probs=124.2

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      ++||+|+||.||+|+.. +++.||||.++...   ....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            36999999999999875 47899999987532   23455678899998876 799999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++|..++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~  146 (321)
T cd05591          81 GDLMFQIQR---SRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEG  146 (321)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceec
Confidence            999988843   346888899999999999999999987   999999999999999999999999999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.90  E-value=6.9e-23  Score=212.73  Aligned_cols=151  Identities=34%  Similarity=0.514  Sum_probs=131.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-----cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-----LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .+|++.++||+|+||.||+|..     .+++.||+|.++... .+...+|.+|+.++++++||||+++++++..+...++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            4678889999999999999974     246789999997533 3344679999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCC--------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC
Q 005825          582 ILEYMPNKSLDVFLFDPT--------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM  647 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~--------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~  647 (675)
                      ||||+++++|.+++....              ....+++.+.+.++.+++.||+|||+++   |+||||||+|||+++++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~  161 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL  161 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence            999999999999985321              1235788899999999999999999987   99999999999999999


Q ss_pred             CeEEeeeccceecC
Q 005825          648 NPKISDFGLARMFG  661 (675)
Q Consensus       648 ~~kl~DFGla~~~~  661 (675)
                      .+||+|||+++.+.
T Consensus       162 ~~kl~dfg~~~~~~  175 (283)
T cd05090         162 HVKISDLGLSREIY  175 (283)
T ss_pred             cEEecccccccccc
Confidence            99999999998764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.90  E-value=4.8e-23  Score=219.01  Aligned_cols=141  Identities=23%  Similarity=0.349  Sum_probs=125.2

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.||+|+||.||+++.. +++.||||.+++.   .....+.++.|..++.++ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            36999999999999864 5889999999753   223456688999999998 699999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |+|..++.   ....+++..+..++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 g~L~~~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~  146 (329)
T cd05588          81 GDLMFHMQ---RQRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG  146 (329)
T ss_pred             CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCcccccc
Confidence            99998884   3356899999999999999999999987   999999999999999999999999999753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.90  E-value=5.3e-23  Score=217.43  Aligned_cols=142  Identities=29%  Similarity=0.357  Sum_probs=122.3

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHh-cCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAK-LQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~-l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      ++||+|+||.||+|+.. +++.||||.++...   ....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999875 47899999997532   2334556667777765 4899999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |+|..++..   ...+++.....++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+...
T Consensus        81 g~L~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~  147 (316)
T cd05592          81 GDLMFHIQS---SGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENM  147 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECC
Confidence            999988843   345888889999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.90  E-value=4.7e-23  Score=217.77  Aligned_cols=150  Identities=35%  Similarity=0.585  Sum_probs=129.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCc----EEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGE----EVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .+|++.+.||+|+||.||+|++. +++    .||||.++... ....+++..|+.+++.++||||++++|+|... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            57899999999999999999863 333    48999987543 34457899999999999999999999999764 5779


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |+||+++|+|.+++...  ...+++...+.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.+.
T Consensus        86 v~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108          86 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             eeecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccccc
Confidence            99999999999998543  335788899999999999999999987   9999999999999999999999999999875


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       161 ~~  162 (316)
T cd05108         161 AD  162 (316)
T ss_pred             CC
Confidence            43

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.90  E-value=6.6e-23  Score=210.04  Aligned_cols=151  Identities=36%  Similarity=0.517  Sum_probs=135.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.++||+|+||.||+|...++..||+|.++.. ....+.+..|+.++++++|+||+++++.+.+.+..++||||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            3678999999999999999999888889999998753 334678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++++|.+++... ....+++..++.++.+++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+..
T Consensus        84 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05072          84 AKGSLLDFLKSD-EGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIED  155 (261)
T ss_pred             CCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCC
Confidence            999999998643 2345788899999999999999999987   99999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.90  E-value=6.1e-23  Score=218.60  Aligned_cols=150  Identities=25%  Similarity=0.332  Sum_probs=132.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||.||+++.. +++.+|+|.++... ....+.+.+|++++++++||||+++++++.+.++.++|||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            468999999999999999999875 58889999887542 2334678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |+++++|.+++..   ...+++.....++.+++.||.|||+.+  +|+||||||+|||+++++.+||+|||+++.+.
T Consensus        84 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~  155 (333)
T cd06650          84 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (333)
T ss_pred             cCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence            9999999999843   345788888999999999999999753  39999999999999999999999999998663

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.90  E-value=7.6e-23  Score=209.08  Aligned_cols=148  Identities=30%  Similarity=0.487  Sum_probs=132.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      ++|++.+.||+|+||.||+++..++..+|+|.++.. ....+.|..|+.++++++||||+++++++...+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            468888999999999999999888889999998743 3345789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +|+|.+++...  ...+++..+..++.+++.||+|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~  151 (256)
T cd05114          83 NGCLLNYLRQR--QGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVL  151 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccC
Confidence            99999998542  235889999999999999999999987   9999999999999999999999999998664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=4.3e-24  Score=225.41  Aligned_cols=155  Identities=32%  Similarity=0.513  Sum_probs=139.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ...+..+.++||-|-||.||.|.++. .-.||||.|+. ....+++|+.|..+|+.++|||+|+|+|+|......|||+|
T Consensus       265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTE  343 (1157)
T KOG4278|consen  265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITE  343 (1157)
T ss_pred             cchheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEe
Confidence            34566778999999999999998865 56799999986 56678999999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ||..|+|.+||.+..+. .++....+.++.||+.||+||..++   +|||||.++|+|+.++..+||+||||+|++.++.
T Consensus       344 fM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT  419 (1157)
T KOG4278|consen  344 FMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT  419 (1157)
T ss_pred             cccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCc
Confidence            99999999999765443 4566778899999999999999987   9999999999999999999999999999998775


Q ss_pred             c
Q 005825          665 L  665 (675)
Q Consensus       665 ~  665 (675)
                      .
T Consensus       420 Y  420 (1157)
T KOG4278|consen  420 Y  420 (1157)
T ss_pred             e
Confidence            3

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=1.3e-22  Score=208.02  Aligned_cols=151  Identities=32%  Similarity=0.482  Sum_probs=135.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.+.||+|++|.||+|...+++.||+|.++.. ....+++.+|+.++++++||||+++++++...+..++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG-TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCC-cccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            4678899999999999999999877889999998753 334678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++++|.+++.... ...+++.....++.+++.||.|||+.+   |+||||||+||++++++.+||+|||+++.+..
T Consensus        84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05068          84 KYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKE  155 (261)
T ss_pred             cCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence            9999999985432 346889999999999999999999987   99999999999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1e-22  Score=211.96  Aligned_cols=149  Identities=28%  Similarity=0.356  Sum_probs=131.2

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      +|++.++||+|+||+||++... +++.||||.+....   ......+.+|+.++++++||||+++++.+..++..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            4788899999999999999864 68899999997532   2233567889999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |+++++|..++... ....+++.....++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05605          81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIP  153 (285)
T ss_pred             ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            99999999888542 2345889999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.89  E-value=6.9e-23  Score=217.27  Aligned_cols=147  Identities=27%  Similarity=0.360  Sum_probs=127.9

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      +|+..+.||+|+||.||+++.. +++.||||.+++..   ....+.+..|..++..+. |++|+++++++.+.+..++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            4677899999999999999864 58899999987532   234466888999998885 577888999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||+++|+|..++.   ....+++.++..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++...
T Consensus        81 Ey~~~g~L~~~i~---~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~  152 (323)
T cd05615          81 EYVNGGDLMYHIQ---QVGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHM  152 (323)
T ss_pred             cCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccC
Confidence            9999999999884   3346889999999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.89  E-value=9.1e-23  Score=217.36  Aligned_cols=146  Identities=26%  Similarity=0.410  Sum_probs=126.2

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-----eEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-----EKI  580 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-----~~~  580 (675)
                      +|++.++||+|+||.||+|+.. +++.||||+++..  ......++.+|+.++++++||||+++++++....     ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            4788999999999999999864 5899999998743  2234457889999999999999999999986432     479


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||++ ++|.+++.   ....+++..+..++.||++||+|||+++   |+||||||+|||+++++.+||+|||+|+..
T Consensus        81 lv~e~~~-~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          81 VVFELME-SDLHQVIK---ANDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             EEEecCC-CCHHHHHH---hcccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            9999995 68988884   3345889999999999999999999987   999999999999999999999999999865


Q ss_pred             C
Q 005825          661 G  661 (675)
Q Consensus       661 ~  661 (675)
                      .
T Consensus       154 ~  154 (338)
T cd07859         154 F  154 (338)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.89  E-value=1e-22  Score=211.35  Aligned_cols=145  Identities=31%  Similarity=0.404  Sum_probs=126.6

Q ss_pred             eCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCH
Q 005825          516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL  591 (675)
Q Consensus       516 IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL  591 (675)
                      ||+|+||+||++... +++.||||.+....   ....+.+..|+.++++++||||+++.+++......++||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            799999999999864 68899999987532   22345678899999999999999999999999999999999999999


Q ss_pred             HHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          592 DVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       592 ~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ..++... .....+++..+..++.||+.||+|||+.+   |+||||||+||++++++.+||+|||+++.+...
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  150 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDG  150 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence            9887542 23456899999999999999999999987   999999999999999999999999999876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.89  E-value=1.1e-22  Score=211.32  Aligned_cols=151  Identities=32%  Similarity=0.551  Sum_probs=132.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-----CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-----~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~  579 (675)
                      ..+|++.+.||+|+||.||++...     +++.||+|+++.......+.|.+|+.++++++||||+++++++...  ...
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   82 (284)
T cd05081           3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   82 (284)
T ss_pred             cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence            357888999999999999999742     4789999999865555667899999999999999999999987543  468


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++...  ...+++..+..++.|++.||+|||+++   |+||||||+||++++++.+||+|||+++.
T Consensus        83 ~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~  157 (284)
T cd05081          83 RLVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKV  157 (284)
T ss_pred             EEEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCccccc
Confidence            8999999999999998532  345889999999999999999999987   99999999999999999999999999997


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      +..
T Consensus       158 ~~~  160 (284)
T cd05081         158 LPQ  160 (284)
T ss_pred             ccC
Confidence            743

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.89  E-value=7.3e-23  Score=216.77  Aligned_cols=141  Identities=28%  Similarity=0.404  Sum_probs=124.4

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.||+|+||.||+++.. +++.||||.+++.   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999875 5889999998753   233456778888888876 699999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |+|..++..   ...+++..+..++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 g~L~~~i~~---~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~  146 (320)
T cd05590          81 GDLMFHIQK---SRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG  146 (320)
T ss_pred             chHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence            999988843   346888999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.89  E-value=5.3e-23  Score=219.76  Aligned_cols=154  Identities=29%  Similarity=0.455  Sum_probs=136.0

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .....|.+...||+|.|++|.+++. ..+..||||.+.+..  ....+.+.+|+++|..+.|||||+|+.+...+..+++
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            3457899999999999999999976 458999999998753  2334568899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||..+|.+.+++.   +.+.+.+.+...++.|+..|++|||.+.   |+|||||++||||+.++++||+|||++..+.
T Consensus       133 V~eya~~ge~~~yl~---~~gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~  206 (596)
T KOG0586|consen  133 VMEYASGGELFDYLV---KHGRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFD  206 (596)
T ss_pred             EEEeccCchhHHHHH---hcccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeec
Confidence            999999999999994   3444556778889999999999999998   9999999999999999999999999999886


Q ss_pred             CCc
Q 005825          662 GDE  664 (675)
Q Consensus       662 ~~~  664 (675)
                      ...
T Consensus       207 ~~~  209 (596)
T KOG0586|consen  207 YGL  209 (596)
T ss_pred             ccc
Confidence            443

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.89  E-value=8.6e-23  Score=216.67  Aligned_cols=141  Identities=28%  Similarity=0.358  Sum_probs=121.7

Q ss_pred             eeeCCcCceeEEEEEE-cCCcEEEEEEecCcC---ccCHHHHHHHHH-HHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS---GQGLEEFKNEML-LIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~-il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.||+|+||+||+++. .+++.+|||++.+..   .....++..|.. +++.++||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            3699999999999986 468999999987532   223345566655 56779999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++|..++.   ....+++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~  146 (325)
T cd05604          81 GELFFHLQ---RERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (325)
T ss_pred             CCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence            99998884   3456889999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.89  E-value=1.4e-22  Score=207.35  Aligned_cols=149  Identities=31%  Similarity=0.499  Sum_probs=133.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      ++|.+.+.||+|+||.||+++..++..+|||.++.. ....++|.+|+.++.+++||||+++++++.+.+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            467888999999999999998877778999998753 3345789999999999999999999999999889999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++|.+++...  ...+++..++.++.||+.||+|||+.+   ++|+||||+||++++++.+||+|||+++.+..
T Consensus        83 ~~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~  152 (256)
T cd05113          83 NGCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLD  152 (256)
T ss_pred             CCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCC
Confidence            99999998542  235889999999999999999999987   99999999999999999999999999987644

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.89  E-value=7.8e-23  Score=228.63  Aligned_cols=156  Identities=21%  Similarity=0.292  Sum_probs=133.2

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC----
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG----  577 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~----  577 (675)
                      ...++|.+.++||+|+||+||+++. .+++.||||.+...  .......+.+|+.++..++|+||+++...+...+    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3457999999999999999999975 46899999998653  2334567889999999999999999988775433    


Q ss_pred             ----eEEEEEEecCCCCHHHHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEe
Q 005825          578 ----EKILILEYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       578 ----~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                          ..++||||+++|+|.+++.... ....+++.....++.|++.||+|||+.+   |+||||||+|||+++++.+||+
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~  185 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLG  185 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEE
Confidence                3679999999999999986432 2456889999999999999999999987   9999999999999999999999


Q ss_pred             eeccceecCCC
Q 005825          653 DFGLARMFGGD  663 (675)
Q Consensus       653 DFGla~~~~~~  663 (675)
                      |||+++.+...
T Consensus       186 DFGls~~~~~~  196 (496)
T PTZ00283        186 DFGFSKMYAAT  196 (496)
T ss_pred             ecccCeecccc
Confidence            99999987543

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=1.4e-22  Score=223.46  Aligned_cols=146  Identities=26%  Similarity=0.357  Sum_probs=128.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ....|.+.+.||+|+||.||+++... ++.||||...      ...+.+|++++++++|+|||++++++..++..++|||
T Consensus       167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e  240 (461)
T PHA03211        167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP  240 (461)
T ss_pred             ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence            34689999999999999999998754 7889999643      2346789999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ++. ++|..++..  ....+++.+++.|+.||++||.|||+++   |+||||||+||||+.++.+||+|||+|+.+...
T Consensus       241 ~~~-~~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~  313 (461)
T PHA03211        241 KYR-SDLYTYLGA--RLRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGS  313 (461)
T ss_pred             ccC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence            995 688888743  2346899999999999999999999987   999999999999999999999999999987543

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.89  E-value=1.1e-22  Score=216.09  Aligned_cols=141  Identities=26%  Similarity=0.363  Sum_probs=124.9

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      ++||+|+||+||+++.. +++.||+|++++..   ....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            37999999999999874 57899999998532   23445688999999888 699999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++|..++.   ....+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~~L~~~~~---~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~  146 (327)
T cd05617          81 GDLMFHMQ---RQRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEG  146 (327)
T ss_pred             CcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceec
Confidence            99998884   3346899999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.89  E-value=1.8e-22  Score=232.69  Aligned_cols=150  Identities=24%  Similarity=0.347  Sum_probs=131.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+|+.. +++.||||++.....   ...++|.+|+.++++++||||+++++++.+.+..++||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            57899999999999999999875 589999999975322   23467999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCC--------CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          584 EYMPNKSLDVFLFDP--------TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~--------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      ||+++++|.+++...        .....+++...+.++.||++||+|||+++   |+||||||+|||++.++.+||+|||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence            999999999988531        11234567788899999999999999987   9999999999999999999999999


Q ss_pred             cceec
Q 005825          656 LARMF  660 (675)
Q Consensus       656 la~~~  660 (675)
                      +|+..
T Consensus       159 LAk~i  163 (932)
T PRK13184        159 AAIFK  163 (932)
T ss_pred             cceec
Confidence            99977

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.89  E-value=9.7e-23  Score=215.87  Aligned_cols=141  Identities=28%  Similarity=0.343  Sum_probs=120.6

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHH-HHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEML-LIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~-il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      ++||+|+||.||+++.. +++.||+|.+.+..   .....++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999874 58899999987532   222344555554 67889999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++|...+..   ...+.+.....++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~  146 (321)
T cd05603          81 GELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (321)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence            999888843   345778888889999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.89  E-value=1.2e-22  Score=215.37  Aligned_cols=141  Identities=28%  Similarity=0.353  Sum_probs=121.4

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHH-HHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEML-LIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~-il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.||+|+||+||+|+.. +++.||||++....   ....+++..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            36999999999999874 68999999987532   222344555554 56789999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++|..++..   ...+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~  146 (323)
T cd05575          81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (323)
T ss_pred             CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence            999998843   446888889999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>PHA02988 hypothetical protein; Provisional

Probab=99.89  E-value=1.4e-22  Score=210.80  Aligned_cols=143  Identities=22%  Similarity=0.373  Sum_probs=125.3

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccC---HHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeEEEEEEec
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQG---LEEFKNEMLLIAKLQHRNLVRILGCCIE----QGEKILILEYM  586 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---~~~f~~E~~il~~l~H~nIv~l~g~~~~----~~~~~lV~Ey~  586 (675)
                      ..|++|++|.||+|.+ +|+.||||+++......   .+.|.+|+.++.+++||||++++|++.+    ....++||||+
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~  104 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC  104 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence            5799999999999998 78899999997643333   4678899999999999999999999977    34688999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++|+|.+++..   ...+++.....++.+++.||.|||+..  .++||||||+|||+++++.+||+|||+++.+..
T Consensus       105 ~~g~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~  175 (283)
T PHA02988        105 TRGYLREVLDK---EKDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSS  175 (283)
T ss_pred             CCCcHHHHHhh---CCCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcc
Confidence            99999999953   346889999999999999999999852  288999999999999999999999999987643

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.89  E-value=1.4e-22  Score=209.79  Aligned_cols=153  Identities=30%  Similarity=0.486  Sum_probs=131.4

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      ..++|++.++||+|+||.||+|...      .+..||||+++... .....+|.+|+.+++.++||||+++++++.+...
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4578999999999999999999753      25679999986432 2334578999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEE
Q 005825          579 KILILEYMPNKSLDVFLFDPTK-------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI  651 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl  651 (675)
                      .++||||+++++|.+++.....       ...+.+..+..++.|++.||+|||+.+   ++||||||+||++++++.+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence            9999999999999999854211       234678889999999999999999987   999999999999999999999


Q ss_pred             eeeccceecC
Q 005825          652 SDFGLARMFG  661 (675)
Q Consensus       652 ~DFGla~~~~  661 (675)
                      +|||+++.+.
T Consensus       161 ~dfg~~~~~~  170 (277)
T cd05062         161 GDFGMTRDIY  170 (277)
T ss_pred             CCCCCccccC
Confidence            9999998653

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.89  E-value=2.2e-22  Score=206.95  Aligned_cols=148  Identities=28%  Similarity=0.468  Sum_probs=133.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      ++|++.++||+|+||.||+|+. .+++.||+|+++.......+.+.+|+.++.+++||||+++++.+..++..++||||+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            5788899999999999999986 468899999997654455667889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++++|.+++..   ...+++..+..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        89 ~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  157 (267)
T cd06646          89 GGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKIT  157 (267)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeec
Confidence            99999998843   346788999999999999999999987   9999999999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.89  E-value=1.3e-22  Score=208.83  Aligned_cols=143  Identities=31%  Similarity=0.459  Sum_probs=122.6

Q ss_pred             eeCCcCceeEEEEEEcC---CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCC
Q 005825          515 KLGEGGFGPVYKGRLLN---GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKS  590 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~~~---g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs  590 (675)
                      +||+|+||.||+|+..+   ...+|+|.+.... ......|.+|+.+++.++||||+++++.+.+....++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            69999999999997543   3568888876432 2334678899999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          591 LDVFLFDPTK--KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       591 L~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |.+++.....  ....++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~  150 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQ  150 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEecccccccc
Confidence            9999865322  233567788899999999999999987   999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.89  E-value=6.4e-23  Score=210.04  Aligned_cols=153  Identities=35%  Similarity=0.564  Sum_probs=138.4

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ...+|++.++||+|+||.||+|...+++.+|+|.++........++..|+.+++.++||||+++++++.+.+..++||||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   83 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL   83 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence            34578888999999999999999888999999999876555677899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++... ....+++..+..++.+++.||.|||+.+   |+|+||||+||++++++.+||+|||+++.+..
T Consensus        84 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~  156 (261)
T cd05148          84 MEKGSLLAFLRSP-EGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKE  156 (261)
T ss_pred             cccCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCC
Confidence            9999999999653 2346789999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.89  E-value=1.5e-22  Score=213.95  Aligned_cols=141  Identities=26%  Similarity=0.369  Sum_probs=123.1

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHh-cCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAK-LQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~-l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.||+|+||+||+|+.. +++.||||.++...   ....+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            36999999999999875 47899999997532   2334566778888876 4899999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |+|..++..   ...+++.+...++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 g~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  146 (316)
T cd05619          81 GDLMFHIQS---CHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKEN  146 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence            999999843   345788899999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.89  E-value=1.9e-22  Score=207.31  Aligned_cols=150  Identities=34%  Similarity=0.581  Sum_probs=132.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|++.+.||+|+||.||+|+...    ...||||.++... .....+|..|+.++++++||||+++++.+.+.+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            3578899999999999999998742    4579999987543 2345678999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++++|.+++...  ...+++..+..++.|++.||+|||+.+   |+|+||||+|||+++++.+||+|||+++.+.
T Consensus        83 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          83 ITEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             EEEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhccc
Confidence            99999999999998542  236889999999999999999999987   9999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.89  E-value=1.1e-23  Score=203.39  Aligned_cols=161  Identities=30%  Similarity=0.430  Sum_probs=136.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc----Ccc----CHHHHHHHHHHHHhcC-CCceeeEEEEEEe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ----SGQ----GLEEFKNEMLLIAKLQ-HRNLVRILGCCIE  575 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~----~~~----~~~~f~~E~~il~~l~-H~nIv~l~g~~~~  575 (675)
                      .-++|...+.||+|..+.|.++.. .++++.|+|++...    ...    ..++-..|+.||+++. ||+|+++.++++.
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            445677778999999999988854 56899999998632    111    2345678999999985 9999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      +...++|+|.|+.|.|.++|   .....++++...+|+.|+..|++|||.+.   |+||||||+|||+|++.++||+|||
T Consensus        95 ~sF~FlVFdl~prGELFDyL---ts~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFG  168 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYL---TSKVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFG  168 (411)
T ss_pred             cchhhhhhhhcccchHHHHh---hhheeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccc
Confidence            99999999999999999999   45667999999999999999999999987   9999999999999999999999999


Q ss_pred             cceecCCCcccCCCCceecC
Q 005825          656 LARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       656 la~~~~~~~~~~~~~~~~GT  675 (675)
                      +|..+.+.+.   .+.++||
T Consensus       169 Fa~~l~~Gek---LrelCGT  185 (411)
T KOG0599|consen  169 FACQLEPGEK---LRELCGT  185 (411)
T ss_pred             eeeccCCchh---HHHhcCC
Confidence            9999976653   2334555

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.89  E-value=1.3e-22  Score=220.65  Aligned_cols=152  Identities=32%  Similarity=0.482  Sum_probs=130.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~  578 (675)
                      .++|.+.++||+|+||.||+|++.      .++.||||+++.... ...+.+..|+.++.++. ||||+++++++...+.
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~  115 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP  115 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence            346778899999999999999853      246899999985432 23457889999999997 9999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCC-----------------------------------------------------------
Q 005825          579 KILILEYMPNKSLDVFLFDPT-----------------------------------------------------------  599 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~-----------------------------------------------------------  599 (675)
                      .++||||+++|+|.++++...                                                           
T Consensus       116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (401)
T cd05107         116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM  195 (401)
T ss_pred             cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence            999999999999999986421                                                           


Q ss_pred             ------------------------------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE
Q 005825          600 ------------------------------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL  643 (675)
Q Consensus       600 ------------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl  643 (675)
                                                          ....+++...+.|+.|++.||+|||+.+   |+||||||+|||+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl  272 (401)
T cd05107         196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVLI  272 (401)
T ss_pred             hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEEE
Confidence                                                1124677788899999999999999887   9999999999999


Q ss_pred             cCCCCeEEeeeccceecC
Q 005825          644 DRDMNPKISDFGLARMFG  661 (675)
Q Consensus       644 ~~~~~~kl~DFGla~~~~  661 (675)
                      ++++.+||+|||+++.+.
T Consensus       273 ~~~~~~kL~DfGla~~~~  290 (401)
T cd05107         273 CEGKLVKICDFGLARDIM  290 (401)
T ss_pred             eCCCEEEEEecCcceecc
Confidence            999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.89  E-value=2.1e-22  Score=232.74  Aligned_cols=151  Identities=26%  Similarity=0.380  Sum_probs=133.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|.+.++||+|+||.||+|+.. +++.||||+++...   ....+.+..|+.+++.++||||+++++++......+||
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            368999999999999999999875 58899999997532   22346788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++..   ...+++...+.|+.||+.||+|||.++   |+||||||+||||+.++.+||+|||+++....
T Consensus        83 mEy~~g~~L~~li~~---~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~~~~  156 (669)
T cd05610          83 MEYLIGGDVKSLLHI---YGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKVTLN  156 (669)
T ss_pred             EeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCccccC
Confidence            999999999999843   345788889999999999999999987   99999999999999999999999999997654


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       157 ~  157 (669)
T cd05610         157 R  157 (669)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.89  E-value=1.5e-22  Score=214.08  Aligned_cols=141  Identities=30%  Similarity=0.393  Sum_probs=123.0

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      ++||+|+||.||+++.. +++.||+|.++...   ....+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999875 58899999997532   23445677788888754 899999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++|..++..   ...+++.....++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 g~L~~~i~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~  146 (316)
T cd05620          81 GDLMFHIQD---KGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKEN  146 (316)
T ss_pred             CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence            999988843   345788899999999999999999987   999999999999999999999999999854

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.89  E-value=1.6e-22  Score=207.39  Aligned_cols=147  Identities=42%  Similarity=0.665  Sum_probs=127.1

Q ss_pred             ceeeeeCCcCceeEEEEEEc-----CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          511 SMECKLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~-----~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .+.+.||+|+||.||+|++.     .+..|+||.++... ....+.|.+|++.+++++||||++++|++.+.+..++|||
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            35689999999999999876     25789999997532 3346889999999999999999999999998888999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |+++|+|.++|... ....+++..+..|+.||++||+|||+++   ++|++|+|+|||+++++.+||+|||+++...
T Consensus        82 ~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~  154 (259)
T PF07714_consen   82 YCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPIS  154 (259)
T ss_dssp             --TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred             cccccccccccccc-cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence            99999999999653 2346899999999999999999999987   9999999999999999999999999999873

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.89  E-value=1.7e-22  Score=206.52  Aligned_cols=149  Identities=33%  Similarity=0.511  Sum_probs=132.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      .+|++.+.||+|+||.||+++..++..+|+|.+... .....+|.+|+.++++++||||+++++++...+..++||||++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            357788999999999999998877788999998643 2345678899999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++|.+++...  ...+++.....++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++....
T Consensus        83 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~  152 (256)
T cd05059          83 NGCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLD  152 (256)
T ss_pred             CCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceeccc
Confidence            99999998542  236889999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.89  E-value=2.2e-22  Score=209.69  Aligned_cols=152  Identities=33%  Similarity=0.559  Sum_probs=133.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .+|.+.+.||+|+||.||++...      ++..+|+|.+........+.+.+|+.++++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            57888899999999999999742      345699999876555556789999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCC----------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEE
Q 005825          582 ILEYMPNKSLDVFLFDPT----------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI  651 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl  651 (675)
                      ||||+++++|.+++....          +...+++..++.++.|++.||+|||+++   ++||||||+|||+++++.+||
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence            999999999999985321          2235899999999999999999999987   999999999999999999999


Q ss_pred             eeeccceecCC
Q 005825          652 SDFGLARMFGG  662 (675)
Q Consensus       652 ~DFGla~~~~~  662 (675)
                      +|||+++.+..
T Consensus       162 ~dfg~~~~~~~  172 (288)
T cd05093         162 GDFGMSRDVYS  172 (288)
T ss_pred             ccCCccccccC
Confidence            99999986643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.89  E-value=1.9e-22  Score=214.08  Aligned_cols=141  Identities=28%  Similarity=0.330  Sum_probs=119.7

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHH-HHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEML-LIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~-il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.||+|+||.||+++.. +++.||+|.+....   .....++..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            36999999999999875 57889999987532   222334444544 56789999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++|..++..   ...+.+.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+..
T Consensus        81 ~~L~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~  146 (325)
T cd05602          81 GELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN  146 (325)
T ss_pred             CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence            999999843   345677788889999999999999987   999999999999999999999999999865

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.89  E-value=2.2e-22  Score=209.64  Aligned_cols=153  Identities=29%  Similarity=0.475  Sum_probs=130.6

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      ..++|++.++||+|+||.||+|...      .+..||+|.++... .....++.+|+.++++++||||+++++++.+...
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4578999999999999999999653      24589999987432 2234568899999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCC-------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEE
Q 005825          579 KILILEYMPNKSLDVFLFDPT-------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI  651 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl  651 (675)
                      .++||||+++|+|.+++....       ....+.+.....++.|++.||.|||+++   |+||||||+|||+++++.+||
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence            999999999999999995321       1234567788899999999999999987   999999999999999999999


Q ss_pred             eeeccceecC
Q 005825          652 SDFGLARMFG  661 (675)
Q Consensus       652 ~DFGla~~~~  661 (675)
                      +|||+++.+.
T Consensus       161 ~Dfg~~~~~~  170 (288)
T cd05061         161 GDFGMTRDIY  170 (288)
T ss_pred             CcCCcccccc
Confidence            9999998653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.89  E-value=2.3e-23  Score=189.68  Aligned_cols=148  Identities=30%  Similarity=0.471  Sum_probs=126.5

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|...++||+|.||+||+|+.. .++.||+|+++...  ...-....+|+-+++.++|.|||++++.....+.+-+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            4556689999999999999865 48899999987532  22335678899999999999999999999888899999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +. .+|.++...  -.+.++......++.|+++||.|+|+++   +.||||||+|.|+..+|+.|++|||+||.++-
T Consensus        83 cd-qdlkkyfds--lng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgi  153 (292)
T KOG0662|consen   83 CD-QDLKKYFDS--LNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGI  153 (292)
T ss_pred             hh-HHHHHHHHh--cCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCC
Confidence            94 567777632  3456788888899999999999999988   99999999999999999999999999998753

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.89  E-value=3.2e-22  Score=210.67  Aligned_cols=148  Identities=29%  Similarity=0.448  Sum_probs=129.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|.+.++||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            57899999999999999999865 57889999987543 23345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++ +|.+++...  ...+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++...
T Consensus        86 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  155 (309)
T cd07872          86 LDK-DLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKS  155 (309)
T ss_pred             CCC-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecC
Confidence            985 788777432  345788888999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.8e-22  Score=211.12  Aligned_cols=151  Identities=30%  Similarity=0.499  Sum_probs=129.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC---------------CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN---------------GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILG  571 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~---------------g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g  571 (675)
                      ++|++.++||+|+||.||+++..+               ...||+|.++... ....+.|.+|++++++++||||+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            578889999999999999987532               2358999987542 233457999999999999999999999


Q ss_pred             EEEeCCeEEEEEEecCCCCHHHHhcCCC---------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEE
Q 005825          572 CCIEQGEKILILEYMPNKSLDVFLFDPT---------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVL  642 (675)
Q Consensus       572 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~---------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NIL  642 (675)
                      ++...+..++||||+++++|.+++....         ....+++..++.++.+++.||+|||+.+   ++||||||+||+
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil  161 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL  161 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence            9999999999999999999999985321         1124688899999999999999999987   999999999999


Q ss_pred             EcCCCCeEEeeeccceecC
Q 005825          643 LDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       643 l~~~~~~kl~DFGla~~~~  661 (675)
                      +++++.+||+|||+++.+.
T Consensus       162 l~~~~~~kl~dfg~~~~~~  180 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLY  180 (295)
T ss_pred             EcCCCcEEecccccccccc
Confidence            9999999999999998663

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.88  E-value=4.5e-22  Score=207.28  Aligned_cols=151  Identities=28%  Similarity=0.487  Sum_probs=124.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc--CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhc---CCCceeeEEEEEEe-----
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKL---QHRNLVRILGCCIE-----  575 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~--~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l---~H~nIv~l~g~~~~-----  575 (675)
                      .+|++.++||+|+||.||+|+..  +++.||||+++...  ......+.+|+.+++.+   +||||+++++++..     
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            36888999999999999999863  46889999987532  22234566777777665   69999999999863     


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      ....++||||++ ++|.+++... ....+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG  155 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEcccc
Confidence            346899999996 6898888542 2335789999999999999999999987   9999999999999999999999999


Q ss_pred             cceecCCC
Q 005825          656 LARMFGGD  663 (675)
Q Consensus       656 la~~~~~~  663 (675)
                      +|+.+...
T Consensus       156 ~~~~~~~~  163 (290)
T cd07862         156 LARIYSFQ  163 (290)
T ss_pred             ceEeccCC
Confidence            99877543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.88  E-value=2.7e-22  Score=206.65  Aligned_cols=145  Identities=32%  Similarity=0.423  Sum_probs=124.3

Q ss_pred             eeeCCcCceeEEEEEEcC---CcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCC
Q 005825          514 CKLGEGGFGPVYKGRLLN---GEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNK  589 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~---g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g  589 (675)
                      +.||+|+||.||+|...+   +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            368999999999997643   46799999875432 33457889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCC--CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          590 SLDVFLFDPT--KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       590 sL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +|.+++....  .....++.....++.|++.||+|||+.+   ++||||||+||++++++++||+|||+++...
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~  151 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKY  151 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCcccccccc
Confidence            9999986432  1234567778889999999999999987   9999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.88  E-value=2.9e-22  Score=209.06  Aligned_cols=152  Identities=32%  Similarity=0.543  Sum_probs=133.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .+|.+.+.||+|+||.||+++..      ++..+++|.++.......+.+.+|+.++++++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            46888899999999999999742      356799999876555556789999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC
Q 005825          582 ILEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN  648 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~  648 (675)
                      ||||+++++|.+++....             ....+++..++.++.||+.||+|||+++   |+||||||+|||+++++.
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~  161 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL  161 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence            999999999999985421             1235889999999999999999999987   999999999999999999


Q ss_pred             eEEeeeccceecCC
Q 005825          649 PKISDFGLARMFGG  662 (675)
Q Consensus       649 ~kl~DFGla~~~~~  662 (675)
                      +||+|||+++....
T Consensus       162 ~~l~dfg~a~~~~~  175 (291)
T cd05094         162 VKIGDFGMSRDVYS  175 (291)
T ss_pred             EEECCCCcccccCC
Confidence            99999999986643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.88  E-value=4.1e-24  Score=232.46  Aligned_cols=150  Identities=37%  Similarity=0.562  Sum_probs=131.8

Q ss_pred             ceeeeeCCcCceeEEEEEE-cCCc----EEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          511 SMECKLGEGGFGPVYKGRL-LNGE----EVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      +..++||+|+||+||+|.+ ++|+    +||||++... ..+...++..|+.+|++++||||+||+|+|.... ..||++
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq  777 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ  777 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence            4457899999999999965 4443    7899998754 4456789999999999999999999999998765 889999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ||+.|.|.+|++..  +..+..+..+.+..|||+||.|||++.   ++||||.++|+||.+-.++||+|||+|+++..++
T Consensus       778 ~mP~G~LlDyvr~h--r~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~  852 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREH--RDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE  852 (1177)
T ss_pred             hcccchHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence            99999999999653  445788999999999999999999886   9999999999999999999999999999998776


Q ss_pred             cc
Q 005825          665 LQ  666 (675)
Q Consensus       665 ~~  666 (675)
                      .+
T Consensus       853 ~e  854 (1177)
T KOG1025|consen  853 KE  854 (1177)
T ss_pred             cc
Confidence            54

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.88  E-value=2.4e-22  Score=207.97  Aligned_cols=151  Identities=34%  Similarity=0.572  Sum_probs=132.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC------CcEEEEEEecCcCcc-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~------g~~vAvK~l~~~~~~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ++|.+.+.||+|+||.||+|+..+      ++.||||.++..... ..+.|.+|++++++++||||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            467888999999999999997633      478999999865443 4578999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCC-----------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCe
Q 005825          581 LILEYMPNKSLDVFLFDPT-----------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP  649 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~  649 (675)
                      +||||+++++|.+++....           ....+++.+...++.|++.||.|||+++   ++||||||+||+++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence            9999999999999985421           2345788899999999999999999987   9999999999999999999


Q ss_pred             EEeeeccceecC
Q 005825          650 KISDFGLARMFG  661 (675)
Q Consensus       650 kl~DFGla~~~~  661 (675)
                      ||+|||+++.+.
T Consensus       162 kl~d~g~~~~~~  173 (280)
T cd05049         162 KIGDFGMSRDVY  173 (280)
T ss_pred             EECCcccceecc
Confidence            999999998653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.88  E-value=2.5e-22  Score=217.28  Aligned_cols=147  Identities=27%  Similarity=0.397  Sum_probs=128.1

Q ss_pred             CcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-----eEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-----EKI  580 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-----~~~  580 (675)
                      +|++.++||+|+||.||+++. .+++.||||++...  .....+++.+|+.+++.++||||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            477889999999999999986 46899999998753  2234567889999999999999999999998776     789


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||+. ++|.+++.   ....+++.....++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+..
T Consensus        81 lv~e~~~-~~l~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          81 VVTELMQ-SDLHKIIV---SPQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             EEeeccc-cCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence            9999997 57877773   3346889999999999999999999987   999999999999999999999999999876


Q ss_pred             CC
Q 005825          661 GG  662 (675)
Q Consensus       661 ~~  662 (675)
                      ..
T Consensus       154 ~~  155 (372)
T cd07853         154 EP  155 (372)
T ss_pred             cc
Confidence            43

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.88  E-value=3.2e-22  Score=207.52  Aligned_cols=151  Identities=36%  Similarity=0.586  Sum_probs=131.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC------CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ++|++.+.||+|+||.||+|....      ...||+|.++... ....++|.+|+.++.+++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            467888999999999999997643      2579999987543 233567899999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCC-------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC
Q 005825          581 LILEYMPNKSLDVFLFDPTK-------------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM  647 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~  647 (675)
                      ++|||+++++|.+++.....             ...+++...+.++.|++.||+|||+.+   ++||||||+||++++++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~  161 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL  161 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence            99999999999999854211             145788999999999999999999987   99999999999999999


Q ss_pred             CeEEeeeccceecC
Q 005825          648 NPKISDFGLARMFG  661 (675)
Q Consensus       648 ~~kl~DFGla~~~~  661 (675)
                      .+||+|||+++...
T Consensus       162 ~~~L~dfg~~~~~~  175 (283)
T cd05048         162 TVKISDFGLSRDIY  175 (283)
T ss_pred             cEEECCCcceeecc
Confidence            99999999998763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.88  E-value=3.9e-22  Score=208.60  Aligned_cols=151  Identities=31%  Similarity=0.516  Sum_probs=130.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-----------------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-----------------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRI  569 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-----------------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l  569 (675)
                      ++|++.++||+|+||.||+++..                 ++..+|+|.++... ......|..|+.++++++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            57899999999999999998532                 23468999997543 3345689999999999999999999


Q ss_pred             EEEEEeCCeEEEEEEecCCCCHHHHhcCCC--------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCE
Q 005825          570 LGCCIEQGEKILILEYMPNKSLDVFLFDPT--------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNV  641 (675)
Q Consensus       570 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NI  641 (675)
                      ++++...+..++||||+++++|.+++....        ....+++.+...++.|++.||+|||+.+   ++||||||+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~Ni  161 (296)
T cd05095          85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRNC  161 (296)
T ss_pred             EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChheE
Confidence            999999999999999999999999986421        1234778889999999999999999987   99999999999


Q ss_pred             EEcCCCCeEEeeeccceecC
Q 005825          642 LLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       642 Ll~~~~~~kl~DFGla~~~~  661 (675)
                      |+++++.+||+|||+++.+.
T Consensus       162 li~~~~~~~l~dfg~~~~~~  181 (296)
T cd05095         162 LVGKNYTIKIADFGMSRNLY  181 (296)
T ss_pred             EEcCCCCEEeccCccccccc
Confidence            99999999999999998763

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.88  E-value=4.3e-24  Score=208.50  Aligned_cols=160  Identities=29%  Similarity=0.514  Sum_probs=140.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .+-|.++++||+|+||.||++..+ .|+.+|||.+.-  ...++++..|+.||.+.+.|++|+++|.+.....+|+||||
T Consensus        32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY  109 (502)
T KOG0574|consen   32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY  109 (502)
T ss_pred             HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence            345778899999999999999654 599999999873  45778999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCcc
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL  665 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~  665 (675)
                      +..|++.++++.  +++++.+.++..|+...++||+|||...   -||||||+.||||.-+|++||+|||.|..+...-.
T Consensus       110 CGAGSiSDI~R~--R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA  184 (502)
T KOG0574|consen  110 CGAGSISDIMRA--RRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA  184 (502)
T ss_pred             cCCCcHHHHHHH--hcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhhHH
Confidence            999999999853  4667999999999999999999999875   89999999999999999999999999988754433


Q ss_pred             cCCCCceecC
Q 005825          666 QGNTKRIVGT  675 (675)
Q Consensus       666 ~~~~~~~~GT  675 (675)
                      +.+|  ++||
T Consensus       185 KRNT--VIGT  192 (502)
T KOG0574|consen  185 KRNT--VIGT  192 (502)
T ss_pred             hhCc--cccC
Confidence            3333  6776

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.88  E-value=4.5e-22  Score=204.35  Aligned_cols=151  Identities=32%  Similarity=0.539  Sum_probs=131.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.++||+|+||.||+|+..+...||+|+++.. ....++|..|+.++++++||||+++++.+. .+..++||||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~   82 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM   82 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence            3578999999999999999998877778999999753 334567999999999999999999999874 45689999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ++++|.+++... ....+++..+..++.+++.||+|||+.+   |+||||||+||++++++.+||+|||+++.+...
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~  155 (262)
T cd05071          83 SKGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN  155 (262)
T ss_pred             CCCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence            999999999542 2345789999999999999999999987   999999999999999999999999999877543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.88  E-value=5.6e-22  Score=215.98  Aligned_cols=146  Identities=22%  Similarity=0.359  Sum_probs=128.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc---CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL---NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ...+|.+.++||+|+||.||++...   .++.||+|.+...     +.+.+|+.++++++||||+++++++......++|
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv  164 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV  164 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence            3468999999999999999999753   3578999988642     3456899999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||++. ++|.+++   .....+++.+++.++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus       165 ~e~~~-~~l~~~l---~~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~  237 (392)
T PHA03207        165 MPKYK-CDLFTYV---DRSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDA  237 (392)
T ss_pred             ehhcC-CCHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence            99986 6788887   23456899999999999999999999987   99999999999999999999999999987754


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       238 ~  238 (392)
T PHA03207        238 H  238 (392)
T ss_pred             c
Confidence            3

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.88  E-value=3.4e-22  Score=205.64  Aligned_cols=150  Identities=32%  Similarity=0.564  Sum_probs=131.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc----CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .+|++.+.||+|+||.||+|+..    .+..+|+|.++... ....+.|..|+.++++++||||+++++++.+.+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            57888899999999999999763    23479999987532 23356789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++...  ...+++.+.+.++.|++.||+|||+++   ++||||||+|||+++++.+||+|||+++.+..
T Consensus        84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          84 TEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             EEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence            9999999999999542  245789999999999999999999987   99999999999999999999999999987754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.88  E-value=2e-22  Score=215.48  Aligned_cols=152  Identities=30%  Similarity=0.475  Sum_probs=128.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE------cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeC-C
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQ-G  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~-~  577 (675)
                      .++|++.++||+|+||.||+|..      .+++.||||+++... ....+.+..|+.++.++ +||||+++++++... .
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            35789999999999999999963      347889999997543 23346788999999999 689999999988654 4


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCC---------------------------------------------------------
Q 005825          578 EKILILEYMPNKSLDVFLFDPTK---------------------------------------------------------  600 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~---------------------------------------------------------  600 (675)
                      ..++||||+++|+|.+++.....                                                         
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            57899999999999999853210                                                         


Q ss_pred             -------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          601 -------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       601 -------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                             ...+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~  230 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIY  230 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccc
Confidence                   124678888999999999999999987   9999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.88  E-value=4.3e-22  Score=204.46  Aligned_cols=150  Identities=32%  Similarity=0.531  Sum_probs=133.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .+|++.++||+|+||.||+|... .++.||+|.++.. ....+++.+|++++++++||||+++++++...+..++||||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            46788899999999999999865 4889999998753 344678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++++|.+++... ....+++..++.++.|+++||+|||+++   ++||||||+||++++++.+||+|||+++.+..
T Consensus        85 ~~~~L~~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~  156 (263)
T cd05052          85 TYGNLLDYLREC-NRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG  156 (263)
T ss_pred             CCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence            999999998542 2345789999999999999999999987   99999999999999999999999999987754

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.88  E-value=3.3e-22  Score=211.54  Aligned_cols=141  Identities=30%  Similarity=0.385  Sum_probs=124.5

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.||+|+||+||+++.. +++.||||.+++.   .....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            36999999999999875 4789999999753   233456678899999888 699999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++|..++..   ...+++.....++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 ~~L~~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  146 (318)
T cd05570          81 GDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEG  146 (318)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeec
Confidence            999988843   346899999999999999999999987   999999999999999999999999999753

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.88  E-value=3.4e-22  Score=208.73  Aligned_cols=153  Identities=31%  Similarity=0.519  Sum_probs=132.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-----------------CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceee
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-----------------GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVR  568 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-----------------g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~  568 (675)
                      ..+|++.++||+|+||.||+++..+                 +..||+|.+.... ....+.+.+|+.++++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            4678889999999999999987542                 2468999987543 234568999999999999999999


Q ss_pred             EEEEEEeCCeEEEEEEecCCCCHHHHhcCCC--------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCC
Q 005825          569 ILGCCIEQGEKILILEYMPNKSLDVFLFDPT--------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASN  640 (675)
Q Consensus       569 l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~N  640 (675)
                      +++++...+..++||||+++++|.+++....        ....+++...+.++.|++.||+|||+.+   |+||||||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N  160 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN  160 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence            9999999999999999999999999985432        1226889999999999999999999987   9999999999


Q ss_pred             EEEcCCCCeEEeeeccceecCC
Q 005825          641 VLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       641 ILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |++++++.+||+|||+++.+..
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~  182 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYS  182 (296)
T ss_pred             eeecCCCceEEccccceeeccc
Confidence            9999999999999999987643

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.88  E-value=3.9e-22  Score=205.57  Aligned_cols=149  Identities=33%  Similarity=0.593  Sum_probs=125.2

Q ss_pred             ceeeeeCCcCceeEEEEEEcC-Cc--EEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC------CeE
Q 005825          511 SMECKLGEGGFGPVYKGRLLN-GE--EVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ------GEK  579 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~~-g~--~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~------~~~  579 (675)
                      .+.++||+|+||.||+|+..+ +.  .+|+|.++..  .....+.+..|+.++++++||||+++++++.+.      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence            456899999999999998754 32  6899988753  233456789999999999999999999988542      246


Q ss_pred             EEEEEecCCCCHHHHhcCC---CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecc
Q 005825          580 ILILEYMPNKSLDVFLFDP---TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL  656 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGl  656 (675)
                      ++||||+++|+|..++...   .....+++.....++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCc
Confidence            8999999999999887422   12345889999999999999999999987   99999999999999999999999999


Q ss_pred             ceecCC
Q 005825          657 ARMFGG  662 (675)
Q Consensus       657 a~~~~~  662 (675)
                      ++.+..
T Consensus       159 ~~~~~~  164 (272)
T cd05075         159 SKKIYN  164 (272)
T ss_pred             ccccCc
Confidence            987643

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.88  E-value=4.1e-22  Score=206.68  Aligned_cols=150  Identities=33%  Similarity=0.510  Sum_probs=126.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCc----EEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGE----EVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~----~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ++|++.+.||+|+||.||+|.+. +++    .+++|.+..... ....++..|+.+++++.||||+++++++. ....++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            46788899999999999999863 344    478888764322 33467888888999999999999999875 456788


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++||+++|+|.+++...  ...+++.....++.||+.||+|||+.+   ++||||||+|||+++++.+||+|||+++.+.
T Consensus        86 i~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~  160 (279)
T cd05111          86 VTQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLY  160 (279)
T ss_pred             EEEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceecc
Confidence            99999999999999542  346889999999999999999999987   9999999999999999999999999998774


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       161 ~~  162 (279)
T cd05111         161 PD  162 (279)
T ss_pred             CC
Confidence            43

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.88  E-value=6.2e-22  Score=208.47  Aligned_cols=149  Identities=26%  Similarity=0.305  Sum_probs=131.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.++||+|+||.||+++.. ++..+|+|.++... ....+++.+|++++.+++||||+++++++.+++..++||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            46889999999999999999864 57889999887542 23345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++++|.+++..   ...+++.....++.|+++||.|||+..  +++||||||+|||+++++.+||+|||+++.+.
T Consensus        81 ~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  151 (308)
T cd06615          81 MDGGSLDQVLKK---AGRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  151 (308)
T ss_pred             cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence            999999999843   355788999999999999999999742  39999999999999999999999999998653

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=1.2e-23  Score=221.53  Aligned_cols=153  Identities=33%  Similarity=0.485  Sum_probs=131.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ...|+.++.||.|+||.||.++. .+.+.||||++.-.   +......+..|+..|.++.|||+|.+-|+|......|||
T Consensus        25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLV  104 (948)
T KOG0577|consen   25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLV  104 (948)
T ss_pred             HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHH
Confidence            34677778999999999999986 45788999998743   333456789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||| -||..+++-  ...+++.+.++..|+.+.++||+|||++.   .||||||+.||||++.|.|||+|||-|.+..+
T Consensus       105 MEYC-lGSAsDlle--VhkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P  178 (948)
T KOG0577|consen  105 MEYC-LGSASDLLE--VHKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAP  178 (948)
T ss_pred             HHHH-hccHHHHHH--HHhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCc
Confidence            9999 456666662  23457888999999999999999999987   99999999999999999999999999998866


Q ss_pred             Ccc
Q 005825          663 DEL  665 (675)
Q Consensus       663 ~~~  665 (675)
                      ..+
T Consensus       179 Ans  181 (948)
T KOG0577|consen  179 ANS  181 (948)
T ss_pred             hhc
Confidence            543

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.88  E-value=3.6e-22  Score=208.33  Aligned_cols=154  Identities=32%  Similarity=0.541  Sum_probs=133.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC------CcEEEEEEecCc-CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQG  577 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~------g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~  577 (675)
                      ..++|++.+.||+|+||.||++...+      ...+|+|.+... ......++.+|+.++.++ +|+||+++++++.+.+
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   89 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG   89 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence            44678899999999999999997632      368999998753 223446788999999999 7999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhcCC-------------CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc
Q 005825          578 EKILILEYMPNKSLDVFLFDP-------------TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD  644 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~  644 (675)
                      ..++||||+++++|..++...             .....+++..++.++.|++.||+|||+.+   |+||||||+|||++
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~  166 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLVT  166 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEEc
Confidence            999999999999999998532             22346889999999999999999999887   99999999999999


Q ss_pred             CCCCeEEeeeccceecCC
Q 005825          645 RDMNPKISDFGLARMFGG  662 (675)
Q Consensus       645 ~~~~~kl~DFGla~~~~~  662 (675)
                      +++.+||+|||+++.+..
T Consensus       167 ~~~~~kL~Dfg~~~~~~~  184 (293)
T cd05053         167 EDHVMKIADFGLARDIHH  184 (293)
T ss_pred             CCCeEEeCcccccccccc
Confidence            999999999999987754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.88  E-value=5.8e-22  Score=213.16  Aligned_cols=145  Identities=23%  Similarity=0.332  Sum_probs=126.4

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .....+|++.+.||+|+||.||+|+.. +++.||+|.....      ....|+.++++++||||+++++++.+.+..++|
T Consensus        62 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  135 (357)
T PHA03209         62 VVASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV  135 (357)
T ss_pred             hhhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence            344568999999999999999999875 4678999975432      235689999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |||+. ++|.+++..  ....+++..+..|+.||+.||.|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus       136 ~e~~~-~~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~  207 (357)
T PHA03209        136 LPHYS-SDLYTYLTK--RSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFP  207 (357)
T ss_pred             EEccC-CcHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCcccccc
Confidence            99995 688887743  3346899999999999999999999987   999999999999999999999999999854

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.88  E-value=2.6e-22  Score=207.68  Aligned_cols=141  Identities=28%  Similarity=0.390  Sum_probs=121.0

Q ss_pred             eeCCcCceeEEEEEEcC-------------------------CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeE
Q 005825          515 KLGEGGFGPVYKGRLLN-------------------------GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI  569 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~~~-------------------------g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l  569 (675)
                      +||+|+||.||+|....                         ...||+|.+........++|.+|+.++++++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            69999999999997421                         13589999876544445678999999999999999999


Q ss_pred             EEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC--
Q 005825          570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM--  647 (675)
Q Consensus       570 ~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~--  647 (675)
                      ++++.+....++||||+++++|+.++...  ...+++..++.++.||++||+|||+++   |+||||||+|||+++.+  
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~  156 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA  156 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence            99999999999999999999999998532  345788999999999999999999887   99999999999997654  


Q ss_pred             -----CeEEeeeccceec
Q 005825          648 -----NPKISDFGLARMF  660 (675)
Q Consensus       648 -----~~kl~DFGla~~~  660 (675)
                           .+||+|||+++..
T Consensus       157 ~~~~~~~kl~d~g~~~~~  174 (274)
T cd05076         157 EGTSPFIKLSDPGVSFTA  174 (274)
T ss_pred             cCccceeeecCCcccccc
Confidence                 3899999998654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=3.6e-22  Score=212.41  Aligned_cols=139  Identities=27%  Similarity=0.344  Sum_probs=119.8

Q ss_pred             eCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhc---CCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKL---QHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       516 IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l---~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      ||+|+||+||+|+.. +++.||||++.+..   ......+..|..++.+.   +||||+++++.+.+.+..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999864 58999999986432   12234455677777665   699999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |+|..++.   ....+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus        81 g~L~~~l~---~~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~  146 (330)
T cd05586          81 GELFWHLQ---KEGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKAN  146 (330)
T ss_pred             ChHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence            99998884   3456888999999999999999999987   999999999999999999999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.88  E-value=5.7e-22  Score=204.20  Aligned_cols=150  Identities=33%  Similarity=0.547  Sum_probs=128.1

Q ss_pred             cceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe-----
Q 005825          510 FSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE-----  578 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~-----  578 (675)
                      |.+.+.||+|+||.||+|....    +..||||+++...  ....+.+..|+.+++.++||||+++++++.+.+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            4677899999999999998642    3679999987532  2345679999999999999999999999876554     


Q ss_pred             -EEEEEEecCCCCHHHHhcCCC---CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeee
Q 005825          579 -KILILEYMPNKSLDVFLFDPT---KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDF  654 (675)
Q Consensus       579 -~~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DF  654 (675)
                       .++||||+++++|..++....   ....+++.....++.|++.||+|||+.+   |+||||||+||++++++.+||+||
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence             799999999999999985431   2346889999999999999999999987   999999999999999999999999


Q ss_pred             ccceecCC
Q 005825          655 GLARMFGG  662 (675)
Q Consensus       655 Gla~~~~~  662 (675)
                      |+++.+..
T Consensus       158 g~~~~~~~  165 (273)
T cd05035         158 GLSKKIYS  165 (273)
T ss_pred             cceeeccc
Confidence            99987643

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.88  E-value=5.2e-22  Score=204.45  Aligned_cols=150  Identities=33%  Similarity=0.572  Sum_probs=131.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-C---cEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-G---EEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g---~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ..|++.+.||+|+||.||+|+... +   ..||||.++.. .....++|..|+.++++++||||+++++++.+++..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            457888999999999999998643 3   36999998754 233456899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|++++...  ...+++.+++.++.|++.||+|||+++   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          84 TEFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             EecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccccc
Confidence            9999999999998542  345889999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.88  E-value=5e-22  Score=205.29  Aligned_cols=153  Identities=29%  Similarity=0.458  Sum_probs=132.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC------CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .++|++.+.||+|+||.||+|...+      +..||+|.+.... ......+.+|+.+++.++||||+++++++......
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   84 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT   84 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence            4678899999999999999997642      4689999987543 23345788999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCC-------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEe
Q 005825          580 ILILEYMPNKSLDVFLFDPT-------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                      ++||||+++++|.+++....       ....+++..++.++.|++.||.|||+.+   |+||||||+||++++++.+||+
T Consensus        85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence            99999999999999986432       1234788899999999999999999887   9999999999999999999999


Q ss_pred             eeccceecCC
Q 005825          653 DFGLARMFGG  662 (675)
Q Consensus       653 DFGla~~~~~  662 (675)
                      |||+++.+..
T Consensus       162 dfg~~~~~~~  171 (277)
T cd05032         162 DFGMTRDIYE  171 (277)
T ss_pred             Ccccchhhcc
Confidence            9999986643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.88  E-value=5.4e-22  Score=206.85  Aligned_cols=150  Identities=35%  Similarity=0.554  Sum_probs=129.3

Q ss_pred             CcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      +|++.+.||+|+||.||+|+..      ....+|+|.+..... ...+.+.+|+.++++++||||+++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4678899999999999999753      235789998875432 335679999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCC---------------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCC
Q 005825          582 ILEYMPNKSLDVFLFDPT---------------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASN  640 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~N  640 (675)
                      ||||+++++|.+++....                     ....+++.+.+.++.|++.||+|||+.+   |+||||||+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n  157 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN  157 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence            999999999999975321                     1235788999999999999999999887   9999999999


Q ss_pred             EEEcCCCCeEEeeeccceecC
Q 005825          641 VLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       641 ILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||+++++.+||+|||+++.+.
T Consensus       158 ill~~~~~~kl~dfg~~~~~~  178 (290)
T cd05045         158 VLVAEGRKMKISDFGLSRDVY  178 (290)
T ss_pred             EEEcCCCcEEecccccccccc
Confidence            999999999999999998763

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=8.5e-22  Score=201.72  Aligned_cols=152  Identities=36%  Similarity=0.558  Sum_probs=136.3

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ..++|.+.++||+|+||.||++...+++.||||.++.. ....+++.+|+.++++++|+||+++++++......++||||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY   82 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence            34688999999999999999999888889999998753 34567899999999999999999999999988899999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++... ....+++.++..++.+++.||.|||+++   ++|+||||+||++++++.+||+|||+++.+..
T Consensus        83 ~~~~~L~~~i~~~-~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~  155 (261)
T cd05034          83 MSKGSLLDFLKSG-EGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIED  155 (261)
T ss_pred             cCCCCHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccc
Confidence            9999999999643 2345889999999999999999999987   99999999999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.88  E-value=4.3e-22  Score=206.32  Aligned_cols=154  Identities=30%  Similarity=0.466  Sum_probs=133.6

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC-----CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEe-CCe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN-----GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIE-QGE  578 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~-----g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~-~~~  578 (675)
                      ..++|++.+.||+|+||.||+|...+     +..|++|+++... ....+.+.+|+.++++++||||+++++++.+ +..
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            45788999999999999999998755     6889999987542 2345678899999999999999999999876 467


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEee
Q 005825          579 KILILEYMPNKSLDVFLFDPTKK-----RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISD  653 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~D  653 (675)
                      .++++||+++++|..++......     ..+++.++..++.+++.||+|||+.+   ++||||||+||++++++.+||+|
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence            89999999999999998543222     46889999999999999999999987   99999999999999999999999


Q ss_pred             eccceecCC
Q 005825          654 FGLARMFGG  662 (675)
Q Consensus       654 FGla~~~~~  662 (675)
                      ||+++.+..
T Consensus       161 ~g~~~~~~~  169 (280)
T cd05043         161 NALSRDLFP  169 (280)
T ss_pred             CCCcccccC
Confidence            999987643

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=1.8e-23  Score=214.93  Aligned_cols=160  Identities=28%  Similarity=0.418  Sum_probs=140.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ..|+..++||+|+||.||+|.. ..++.||+|++... .....+.+++|+.+++.++|+||.+++|.+..+..++++|||
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            4566668999999999999986 45899999999854 344568899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCcc
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL  665 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~  665 (675)
                      +.+|++.+.|   .....+.+....-|..++..||.|||.+.   .||||||+.||||..+|.+||+|||.|..+.....
T Consensus        93 ~~gGsv~~lL---~~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen   93 CGGGSVLDLL---KSGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             hcCcchhhhh---ccCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhh
Confidence            9999999998   33445577777888999999999999987   99999999999999999999999999999877666


Q ss_pred             cCCCCceecC
Q 005825          666 QGNTKRIVGT  675 (675)
Q Consensus       666 ~~~~~~~~GT  675 (675)
                      +.  .+++||
T Consensus       167 rr--~tfvGT  174 (467)
T KOG0201|consen  167 RR--KTFVGT  174 (467)
T ss_pred             cc--cccccc
Confidence            54  447887

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.88  E-value=4.2e-22  Score=204.82  Aligned_cols=148  Identities=27%  Similarity=0.493  Sum_probs=133.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      ++|++.++||+|+||.||+|+.. +++.||+|.++.........+++|+.+++.++||||+++++.+...+..++||||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            57788899999999999999864 58899999987655455567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++++|.+++..   ...+++.+...++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||+++.+.
T Consensus        89 ~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd06645          89 GGGSLQDIYHV---TGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQIT  157 (267)
T ss_pred             CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence            99999999843   346889999999999999999999987   9999999999999999999999999998664

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.88  E-value=4.2e-22  Score=202.96  Aligned_cols=143  Identities=31%  Similarity=0.501  Sum_probs=126.8

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCH
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL  591 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL  591 (675)
                      ++||+|+||.||+|+.. +++.+|+|.+.... ......|.+|++++++++||||+++++++...+..++||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            46999999999999874 68999999886532 33456799999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          592 DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       592 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      .+++..  ....+++.+...++.|++.||+|||+++   |+||||||+||+++.++.+||+|||+++...
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  145 (252)
T cd05084          81 LTFLRT--EGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEE  145 (252)
T ss_pred             HHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccc
Confidence            999853  2345789999999999999999999987   9999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.88  E-value=4.6e-22  Score=203.24  Aligned_cols=145  Identities=35%  Similarity=0.567  Sum_probs=129.3

Q ss_pred             cceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCH--HHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          510 FSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGL--EEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~--~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      |++.+.||+|+||+||+++... ++.+|+|.+........  .....|+.++++++||||+++++++.+....++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            6788999999999999998765 67899999986543322  23456999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++++|.+++.   ....+++..+..++.|+++||+|||+.+   |+|+||||+||++++++.+||+|||.+..+
T Consensus        81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~  148 (260)
T PF00069_consen   81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKL  148 (260)
T ss_dssp             TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEES
T ss_pred             cccccccccc---cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc
Confidence            9999999995   4556899999999999999999999987   999999999999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.88  E-value=5.1e-22  Score=208.54  Aligned_cols=153  Identities=31%  Similarity=0.541  Sum_probs=132.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc--------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeC
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL--------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQ  576 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~  576 (675)
                      ..+|.+.+.||+|+||.||+++..        ++..||+|.++... ....+++.+|+.+++.+ +||||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            467888899999999999999742        24579999987532 34457799999999999 899999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE
Q 005825          577 GEKILILEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL  643 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl  643 (675)
                      ...++||||+++++|.+++....             ....+++.+++.++.||+.||.|||+++   |+||||||+|||+
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili  170 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVLV  170 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEEE
Confidence            99999999999999999986421             1235788899999999999999999987   9999999999999


Q ss_pred             cCCCCeEEeeeccceecCC
Q 005825          644 DRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       644 ~~~~~~kl~DFGla~~~~~  662 (675)
                      ++++.+||+|||+|+.+..
T Consensus       171 ~~~~~~kl~D~g~~~~~~~  189 (304)
T cd05101         171 TENNVMKIADFGLARDVNN  189 (304)
T ss_pred             cCCCcEEECCCccceeccc
Confidence            9999999999999987754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.88  E-value=8.8e-22  Score=204.89  Aligned_cols=149  Identities=28%  Similarity=0.341  Sum_probs=130.4

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .|+..++||+|+||+||++... +++.+|+|.+....   ....+.+.+|+.++++++|+||+++.+.+..++..++|||
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence            3677789999999999999864 58899999987532   2233457889999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |+++++|..++... ....+++.....++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05632          81 IMNGGDLKFHIYNM-GNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIP  153 (285)
T ss_pred             eccCccHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence            99999999888542 2345899999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.88  E-value=7.6e-22  Score=202.16  Aligned_cols=150  Identities=37%  Similarity=0.540  Sum_probs=133.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .+.|++.++||+|+||.||+|...+++.||+|.+... ....+.|.+|+.++++++|+||+++++++ ..+..++||||+
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~   82 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG-SMSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYM   82 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCceEEEEEecCC-CCcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcC
Confidence            4678899999999999999999888999999998753 33457899999999999999999999986 456789999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++++|.+++... ....+++.++..++.|++.||+|||+.+   ++||||||+||++++++.++|+|||+++.+..
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05067          83 ENGSLVDFLKTP-EGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIED  154 (260)
T ss_pred             CCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence            999999998543 2346889999999999999999999887   99999999999999999999999999987753

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.88  E-value=7.8e-22  Score=205.68  Aligned_cols=150  Identities=31%  Similarity=0.431  Sum_probs=133.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.+.||+|+||.||+++.. +++.+|+|.++...   ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            47889999999999999999875 58999999987532   234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++++|.+++..   ...+++..+..++.|++.||+|||+.+   |+|+||+|+|||+++++.+||+|||+++.+...
T Consensus        81 e~~~~~~L~~~~~~---~~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  154 (290)
T cd05580          81 EYVPGGELFSHLRK---SGRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR  154 (290)
T ss_pred             ecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence            99999999999843   356889999999999999999999987   999999999999999999999999999877443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.88  E-value=5.9e-22  Score=205.89  Aligned_cols=150  Identities=35%  Similarity=0.561  Sum_probs=130.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-----cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-----LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEK  579 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~  579 (675)
                      ..|++.++||+|+||.||+++.     .+++.||+|.++... ....+.+.+|+.++++++||||+++.+++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            4568889999999999999974     347889999987543 33456799999999999999999999999875  568


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++...  ...+++.++..++.|++.||+|||+++   ++||||||+||++++++.+||+|||+++.
T Consensus        84 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             EEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence            9999999999999998432  235799999999999999999999987   99999999999999999999999999987


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      +..
T Consensus       159 ~~~  161 (284)
T cd05079         159 IET  161 (284)
T ss_pred             ccc
Confidence            643

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.88  E-value=1.1e-21  Score=203.39  Aligned_cols=145  Identities=26%  Similarity=0.383  Sum_probs=128.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.++||+|+||.||+|+. .+++.||+|.+... .....+++.+|+.++++++||||+++++.+...+..++||||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3678889999999999999986 46889999998654 233456799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|..+.       .+++.....++.|++.||+|||+.+   |+|+||||+|||++.++.+||+|||+++.+..
T Consensus        81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~  147 (279)
T cd06619          81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVN  147 (279)
T ss_pred             CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceeccc
Confidence            9999997653       3577888899999999999999987   99999999999999999999999999987643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=6.6e-22  Score=202.04  Aligned_cols=149  Identities=32%  Similarity=0.573  Sum_probs=133.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.+.||+|+||.||++... ++.||+|.++.... ..+++.+|+.++++++|+||+++++++...+..++||||+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   82 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM   82 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence            357888899999999999999874 78899999986433 5678999999999999999999999999989999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++++|.+++.... ...+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||+++...
T Consensus        83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~  153 (256)
T cd05039          83 AKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEAS  153 (256)
T ss_pred             CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccc
Confidence            9999999985432 236899999999999999999999987   9999999999999999999999999998774

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.88  E-value=2.9e-22  Score=213.68  Aligned_cols=152  Identities=31%  Similarity=0.489  Sum_probs=128.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhc-CCCceeeEEEEEEeC-Ce
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQ-GE  578 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~-~~  578 (675)
                      ++|++.+.||+|+||.||+|+..      .++.||+|+++.... ...+.+..|+.++.++ +|+||++++++|... ..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            57889999999999999999642      257899999875322 2345678899999999 899999999998754 46


Q ss_pred             EEEEEEecCCCCHHHHhcCCCC----------------------------------------------------------
Q 005825          579 KILILEYMPNKSLDVFLFDPTK----------------------------------------------------------  600 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~----------------------------------------------------------  600 (675)
                      .+++|||+++++|.+++.....                                                          
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            7899999999999998853211                                                          


Q ss_pred             cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          601 KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       601 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ...+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+..
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~  225 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYK  225 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhccc
Confidence            126789999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.88  E-value=3.5e-22  Score=207.37  Aligned_cols=151  Identities=35%  Similarity=0.519  Sum_probs=129.9

Q ss_pred             CcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCcc-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      +|++.++||+|+||.||+|+..      +++.||||+++..... ..+.|..|+.++.+++||||+++++++.+.+..++
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~   85 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM   85 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence            4677789999999999999763      2578999999854332 34678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCC-------------CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC
Q 005825          582 ILEYMPNKSLDVFLFDP-------------TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN  648 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~  648 (675)
                      ++||+++++|.+++...             .....+++..+..++.|++.||.|||+.+   |+||||||+||++++++.
T Consensus        86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~  162 (283)
T cd05091          86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN  162 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence            99999999999998421             11235788889999999999999999987   999999999999999999


Q ss_pred             eEEeeeccceecCC
Q 005825          649 PKISDFGLARMFGG  662 (675)
Q Consensus       649 ~kl~DFGla~~~~~  662 (675)
                      +||+|||+++.+..
T Consensus       163 ~kl~Dfg~~~~~~~  176 (283)
T cd05091         163 VKISDLGLFREVYA  176 (283)
T ss_pred             eEeccccccccccc
Confidence            99999999987643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.88  E-value=5.5e-22  Score=205.78  Aligned_cols=151  Identities=32%  Similarity=0.548  Sum_probs=132.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .+|+..++||+|+||.||+++..      ++..+|+|.++.......+.|.+|+.++++++|+||+++++++.+.+..++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM   84 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence            46777899999999999999642      356899999886555566789999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCC------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCe
Q 005825          582 ILEYMPNKSLDVFLFDPTK------------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP  649 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~  649 (675)
                      ||||+++++|.+++.....            ...+++..++.++.|++.||+|||+.+   |+||||||+|||+++++.+
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~  161 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV  161 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence            9999999999999864221            135789999999999999999999987   9999999999999999999


Q ss_pred             EEeeeccceecC
Q 005825          650 KISDFGLARMFG  661 (675)
Q Consensus       650 kl~DFGla~~~~  661 (675)
                      ||+|||+++.+.
T Consensus       162 kL~dfg~~~~~~  173 (280)
T cd05092         162 KIGDFGMSRDIY  173 (280)
T ss_pred             EECCCCceeEcC
Confidence            999999998663

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.88  E-value=1e-21  Score=204.34  Aligned_cols=149  Identities=28%  Similarity=0.344  Sum_probs=129.9

Q ss_pred             cceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          510 FSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      |+..+.||+|+||.||++... +++.||||.+.....   ...+.+..|+.++++++|+||+++++.+.+.+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            677789999999999999864 588999999875322   2235678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++... ....+++.++..++.|++.||.|||+.+   |+||||||+||++++++.+||+|||++.....
T Consensus        82 ~~g~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  154 (285)
T cd05630          82 MNGGDLKFHIYHM-GEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE  154 (285)
T ss_pred             cCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence            9999999988542 2235888999999999999999999887   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.88  E-value=1.2e-21  Score=203.00  Aligned_cols=143  Identities=29%  Similarity=0.398  Sum_probs=124.1

Q ss_pred             eCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCH
Q 005825          516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL  591 (675)
Q Consensus       516 IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL  591 (675)
                      ||+|+||.||+++.. +++.+|+|.+....   ....+.+..|++++++++||||+++++++..+...++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            799999999999864 58999999986422   12234566799999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          592 DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       592 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ..++... ....+++..+..++.||+.||+|||+.+   |+||||||+||++++++.+||+|||++..+..
T Consensus        81 ~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~  147 (277)
T cd05607          81 KYHIYNV-GERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKD  147 (277)
T ss_pred             HHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCC
Confidence            9888542 2334788999999999999999999987   99999999999999999999999999987754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.88  E-value=1.3e-21  Score=202.99  Aligned_cols=149  Identities=34%  Similarity=0.538  Sum_probs=131.1

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|++.+.||+|++|.||+|+.. +++.||||+++...  ....+.+.+|+.++.+++||||+++++++.+++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            4788899999999999999874 58999999987432  23346788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++ ++|.+++........+++.....++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++.++
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  152 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFG  152 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecC
Confidence            97 688888754444456899999999999999999999987   9999999999999999999999999998664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.88  E-value=1.1e-21  Score=205.21  Aligned_cols=150  Identities=27%  Similarity=0.430  Sum_probs=134.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ...+|++.+.||+|+||.||+|+. .+++.||+|.+........+.+.+|+.+++.+.||||+++++.+..+.+.++|||
T Consensus        18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e   97 (296)
T cd06654          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (296)
T ss_pred             cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence            346889999999999999999986 4588999999986555556789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |+++++|.+++..    ..+++.+...++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++....
T Consensus        98 ~~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~  168 (296)
T cd06654          98 YLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (296)
T ss_pred             ccCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence            9999999999842    34788899999999999999999987   99999999999999999999999999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.88  E-value=8.4e-22  Score=204.44  Aligned_cols=148  Identities=29%  Similarity=0.476  Sum_probs=132.1

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      .|++.++||+|+||.||+++.. ++..+++|.+........+.+.+|+.+++.++||||+++++++..++..++||||++
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~   85 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   85 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence            3577789999999999999875 478899999876555566789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++|..++..  ....+++..+..++.|+++||+|||+.+   |+||||||+||+++.++.+||+|||+++...
T Consensus        86 ~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  154 (282)
T cd06643          86 GGAVDAVMLE--LERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNT  154 (282)
T ss_pred             CCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEcccccccccc
Confidence            9999988753  2346899999999999999999999987   9999999999999999999999999997653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.88  E-value=8.5e-22  Score=204.07  Aligned_cols=150  Identities=33%  Similarity=0.525  Sum_probs=129.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCc----EEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGE----EVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~----~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .++|++.++||+|+||.||+|+. .+++    .||+|.++... ....+++.+|+.++..++||||+++++++.. ...+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence            35788889999999999999975 3444    48999987542 3345678899999999999999999999975 4577


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++|||+++|+|.+++...  ...+++...+.++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+
T Consensus        85 l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~  159 (279)
T cd05109          85 LVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (279)
T ss_pred             EEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeec
Confidence            999999999999998542  345889999999999999999999987   999999999999999999999999999987


Q ss_pred             CC
Q 005825          661 GG  662 (675)
Q Consensus       661 ~~  662 (675)
                      ..
T Consensus       160 ~~  161 (279)
T cd05109         160 DI  161 (279)
T ss_pred             cc
Confidence            53

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.88  E-value=8.7e-22  Score=201.72  Aligned_cols=150  Identities=33%  Similarity=0.546  Sum_probs=132.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      ++|++.++||+|+||.||++...++..+|+|.++... ...+.|.+|+.++++++|+|++++++++. ....++||||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence            4688889999999999999998888899999997633 24567999999999999999999999875 456899999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++|.+++... ....+++.++..++.+++.||+|||+.+   |+||||||+||++++++.+||+|||+++.+...
T Consensus        84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05070          84 KGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDN  155 (260)
T ss_pred             CCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCc
Confidence            99999998642 2345789999999999999999999987   999999999999999999999999999877543

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.88  E-value=9.6e-22  Score=205.89  Aligned_cols=151  Identities=27%  Similarity=0.430  Sum_probs=135.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ...+|++.+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus        17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   96 (297)
T cd06656          17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   96 (297)
T ss_pred             hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence            347899999999999999999986 4689999999976555556778999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |+++++|.+++..    ..+++..+..++.+++.||.|||+.+   |+||||||+||+++.++.+||+|||+++....+
T Consensus        97 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~  168 (297)
T cd06656          97 YLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  168 (297)
T ss_pred             ccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence            9999999999842    34788899999999999999999987   999999999999999999999999999876443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.88  E-value=1.3e-21  Score=203.00  Aligned_cols=150  Identities=28%  Similarity=0.421  Sum_probs=132.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|+..+.||+|+||.||+++.. +++.||+|++....  ....+.+.+|+.++++++||||+++++++......++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            46888899999999999999875 58999999986432  2334568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |++++.|..++..   ...+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+...
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  153 (286)
T cd07847          81 YCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGP  153 (286)
T ss_pred             ccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence            9999999887732   345899999999999999999999987   999999999999999999999999999987543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.88  E-value=9.7e-22  Score=202.32  Aligned_cols=154  Identities=31%  Similarity=0.438  Sum_probs=132.0

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .+++++.....||+|+||.||+|+.. ++..||+|.+........+.+.+|+.++++++|+||+++++++..++..++|+
T Consensus         5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   84 (268)
T cd06624           5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM   84 (268)
T ss_pred             cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence            34556666679999999999999864 57889999988665556678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-CCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-DMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DFGla~~~~  661 (675)
                      ||+++++|.+++.........++..+..++.||+.||+|||+.+   |+||||||+||+++. ++.+||+|||++..+.
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~  160 (268)
T cd06624          85 EQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA  160 (268)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence            99999999999864322212277888889999999999999987   999999999999976 6799999999998764

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.87  E-value=7.8e-22  Score=207.52  Aligned_cols=152  Identities=33%  Similarity=0.544  Sum_probs=131.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc--------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeC
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL--------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQ  576 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~  576 (675)
                      .++|.+.+.||+|+||.||+++..        +...+|+|.++... .....++..|+.++.++ +||||+++++++...
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   96 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   96 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            357899999999999999999752        23579999997542 33456788999999999 799999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE
Q 005825          577 GEKILILEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL  643 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl  643 (675)
                      +..++||||+++++|.+++....             ....+++.+++.++.|++.||+|||+.+   ++||||||+||++
T Consensus        97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill  173 (307)
T cd05098          97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV  173 (307)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence            99999999999999999996432             1235889999999999999999999887   9999999999999


Q ss_pred             cCCCCeEEeeeccceecC
Q 005825          644 DRDMNPKISDFGLARMFG  661 (675)
Q Consensus       644 ~~~~~~kl~DFGla~~~~  661 (675)
                      ++++.+||+|||+|+.+.
T Consensus       174 ~~~~~~kL~dfg~a~~~~  191 (307)
T cd05098         174 TEDNVMKIADFGLARDIH  191 (307)
T ss_pred             cCCCcEEECCCccccccc
Confidence            999999999999998664

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=3.3e-23  Score=204.41  Aligned_cols=162  Identities=29%  Similarity=0.337  Sum_probs=137.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCcc---CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQ---GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ..++|..+++||+|.||+|.+++- ..++.+|+|++++....   ....-..|-++|...+||.+..|--.++..+++++
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF  245 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF  245 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence            347888899999999999999974 56999999999976433   34556778999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||..||.|.-+|   .+.+.+++....-+-..|..||.|||++.   ||.||||.+|.|||++|++||+||||++.--
T Consensus       246 VMeyanGGeLf~HL---srer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I  319 (516)
T KOG0690|consen  246 VMEYANGGELFFHL---SRERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEI  319 (516)
T ss_pred             EEEEccCceEeeeh---hhhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcc
Confidence            99999999998777   34556777666667888999999999987   9999999999999999999999999998532


Q ss_pred             CCcccCCCCceecC
Q 005825          662 GDELQGNTKRIVGT  675 (675)
Q Consensus       662 ~~~~~~~~~~~~GT  675 (675)
                      ..  ...+++.+||
T Consensus       320 ~~--g~t~kTFCGT  331 (516)
T KOG0690|consen  320 KY--GDTTKTFCGT  331 (516)
T ss_pred             cc--cceeccccCC
Confidence            22  2346667887

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.87  E-value=1.5e-21  Score=200.10  Aligned_cols=149  Identities=32%  Similarity=0.531  Sum_probs=130.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      ++|.+.++||+|+||.||++...++..+|+|.+... ....+.+.+|+.++++++|||++++++++. .+..++||||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG-TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG   83 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccC-CccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence            468888999999999999999877778999998753 234567899999999999999999999875 456889999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++|.+++... ....+++..+..++.+++.||+|||+.+   ++|+||||+||++++++.+||+|||+++.+..
T Consensus        84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05069          84 KGSLLDFLKEG-DGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIED  154 (260)
T ss_pred             CCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccC
Confidence            99999999643 2345789999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.87  E-value=5.9e-22  Score=204.17  Aligned_cols=142  Identities=27%  Similarity=0.422  Sum_probs=120.7

Q ss_pred             eeCCcCceeEEEEEEcCC---cEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCC
Q 005825          515 KLGEGGFGPVYKGRLLNG---EEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKS  590 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~~~g---~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs  590 (675)
                      +||+|+||.||+++..++   ..+++|.++... ....+.|.+|+.+++.++||||+++++.+.+....++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            699999999999975443   346677766433 2345789999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCC-cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          591 LDVFLFDPTK-KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       591 L~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      |.+++..... ....++.....++.||++||+|||+.+   ++||||||+|||++.++.+||+|||+++.
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~  148 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPS  148 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccc
Confidence            9999864322 234566777889999999999999987   99999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.87  E-value=5.9e-22  Score=202.44  Aligned_cols=142  Identities=29%  Similarity=0.474  Sum_probs=123.1

Q ss_pred             eeeCCcCceeEEEEEEcCCc-----------EEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          514 CKLGEGGFGPVYKGRLLNGE-----------EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~-----------~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ++||+|+||.||+|...+..           .+++|.+...... ...|.+|+.++++++||||+++++++.. +..++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            46999999999999875432           5788887654333 6789999999999999999999999988 788999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-------CeEEeeec
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-------NPKISDFG  655 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-------~~kl~DFG  655 (675)
                      |||+++++|.+++....  ..+++..++.++.||+.||+|||+++   |+||||||+|||++.++       .+||+|||
T Consensus        79 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg  153 (259)
T cd05037          79 EEYVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPG  153 (259)
T ss_pred             EEcCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCC
Confidence            99999999999995432  26889999999999999999999887   99999999999999888       79999999


Q ss_pred             cceecCC
Q 005825          656 LARMFGG  662 (675)
Q Consensus       656 la~~~~~  662 (675)
                      +++.+..
T Consensus       154 ~a~~~~~  160 (259)
T cd05037         154 IPITVLS  160 (259)
T ss_pred             ccccccc
Confidence            9987643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.87  E-value=7.1e-22  Score=203.57  Aligned_cols=151  Identities=31%  Similarity=0.504  Sum_probs=131.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeC------C
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQ------G  577 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~------~  577 (675)
                      +++.|++.+.||+|+||.||+|+.. +++.||+|.+... .....++..|+.++.++ +||||+++++++...      .
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            5677888899999999999999864 5889999998753 34556788999999998 699999999998753      4


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      ..++||||+++++|.+++... ....+++..+..++.|++.||+|||+++   |+||||||+||++++++.+||+|||++
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~  158 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS  158 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCc
Confidence            688999999999999998542 2346889999999999999999999987   999999999999999999999999999


Q ss_pred             eecC
Q 005825          658 RMFG  661 (675)
Q Consensus       658 ~~~~  661 (675)
                      +.+.
T Consensus       159 ~~~~  162 (272)
T cd06637         159 AQLD  162 (272)
T ss_pred             eecc
Confidence            8764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=5.5e-22  Score=205.50  Aligned_cols=150  Identities=28%  Similarity=0.454  Sum_probs=134.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .++|++.++||+|+||.||+++.. +++.+|+|.++.......+.|..|+.++++++||||+++++.+..+...++||||
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            457888899999999999999874 5889999999765555667899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++++|..++...  ...+++.....++.|++.||.|||+.+   |+|+||||+||+++.++.+||+|||++....
T Consensus        84 ~~~~~L~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~  154 (280)
T cd06611          84 CDGGALDSIMLEL--ERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNK  154 (280)
T ss_pred             cCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhc
Confidence            9999999998432  345889999999999999999999987   9999999999999999999999999987653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=1.1e-21  Score=200.89  Aligned_cols=149  Identities=31%  Similarity=0.487  Sum_probs=131.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-----ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-----GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ++|.+.+.||+|++|.||++... ++++||+|.+....     ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            57888999999999999999864 58999999886432     1234578899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++++|.+++..   ...+++.....++.+++.||+|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        82 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~  155 (263)
T cd06625          82 FMEYMPGGSVKDQLKA---YGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ  155 (263)
T ss_pred             EEEECCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence            9999999999998843   345788888999999999999999987   9999999999999999999999999998764


Q ss_pred             C
Q 005825          662 G  662 (675)
Q Consensus       662 ~  662 (675)
                      .
T Consensus       156 ~  156 (263)
T cd06625         156 T  156 (263)
T ss_pred             c
Confidence            3

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.87  E-value=7.4e-22  Score=207.36  Aligned_cols=151  Identities=34%  Similarity=0.579  Sum_probs=129.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCc--EEEEEEecCc-CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGE--EVAVKRLSSQ-SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~--~vAvK~l~~~-~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|++.+.||+|+||.||+|+.. ++.  .+|+|.++.. .....+.+.+|+.++.++ +||||+++++++.+.+..++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            357888999999999999999864 343  4688877643 233456789999999999 89999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC
Q 005825          582 ILEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN  648 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~  648 (675)
                      ||||+++++|.+++....             ....+++.+++.++.|++.||+|||+++   |+||||||+|||+++++.
T Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~  162 (303)
T cd05088          86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV  162 (303)
T ss_pred             EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCc
Confidence            999999999999986421             1235789999999999999999999987   999999999999999999


Q ss_pred             eEEeeeccceec
Q 005825          649 PKISDFGLARMF  660 (675)
Q Consensus       649 ~kl~DFGla~~~  660 (675)
                      +||+|||+++..
T Consensus       163 ~kl~dfg~~~~~  174 (303)
T cd05088         163 AKIADFGLSRGQ  174 (303)
T ss_pred             EEeCccccCccc
Confidence            999999999743

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.87  E-value=7.8e-22  Score=207.14  Aligned_cols=152  Identities=34%  Similarity=0.491  Sum_probs=132.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~  578 (675)
                      .++|.+.++||+|+||.||++...      .+..||||.++... ....+.+.+|+.+++++ +||||+++++++...+.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            357889999999999999999641      35579999987542 23346789999999999 79999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++||||+++++|.+++... ....+++.+...++.+++.||+|||+++   |+|+||||+|||+++++.+||+|||+++
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~  189 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRK-RESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLAR  189 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcccc
Confidence            99999999999999998542 2234899999999999999999999987   9999999999999999999999999998


Q ss_pred             ecCC
Q 005825          659 MFGG  662 (675)
Q Consensus       659 ~~~~  662 (675)
                      .+..
T Consensus       190 ~~~~  193 (302)
T cd05055         190 DIMN  193 (302)
T ss_pred             cccC
Confidence            7643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.87  E-value=1.3e-21  Score=200.39  Aligned_cols=143  Identities=33%  Similarity=0.545  Sum_probs=123.6

Q ss_pred             eeCCcCceeEEEEEEc---CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCC
Q 005825          515 KLGEGGFGPVYKGRLL---NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKS  590 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs  590 (675)
                      .||+|+||.||+|.+.   ++..||+|.+..... ...++|.+|+.++++++||||+++++++. .+..++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            4899999999999763   355799999876432 33567999999999999999999999885 457899999999999


Q ss_pred             HHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          591 LDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       591 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |.+++..  ....+++..++.++.|++.||+|||+++   ++||||||+|||++.++.+||+|||+++.+..+
T Consensus        81 L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  148 (257)
T cd05115          81 LNKFLSG--KKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             HHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCC
Confidence            9999853  2346889999999999999999999987   999999999999999999999999999876443

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.87  E-value=1.4e-21  Score=200.68  Aligned_cols=148  Identities=30%  Similarity=0.465  Sum_probs=128.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-----ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-----GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEK  579 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~  579 (675)
                      ++|++.++||+|+||.||+++.. +++.||||.+....     ....+.+.+|+.++++++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            57899999999999999999864 58999999885321     12345788999999999999999999998764  457


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++..   ...+++.....++.|++.||+|||+.+   |+|+||||+||+++.++.+||+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKS---YGALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             EEEEEecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence            899999999999999843   345788888999999999999999987   99999999999999999999999999986


Q ss_pred             cC
Q 005825          660 FG  661 (675)
Q Consensus       660 ~~  661 (675)
                      +.
T Consensus       156 ~~  157 (265)
T cd06652         156 LQ  157 (265)
T ss_pred             cc
Confidence            54

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.87  E-value=6e-22  Score=205.88  Aligned_cols=152  Identities=25%  Similarity=0.389  Sum_probs=132.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.+.||+|+||.||+++.. .++.||+|.++.. .....+.+.+|+.++++++||||+++++.+...+..++||||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            36788899999999999999875 6899999998753 223356789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++++|..++........+++.....++.+++.||.|||+..  +|+||||||+||++++++.+||+|||+++.+.
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  154 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV  154 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            999999999854333346899999999999999999999742  39999999999999999999999999997653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.87  E-value=9.8e-22  Score=201.93  Aligned_cols=143  Identities=24%  Similarity=0.392  Sum_probs=123.4

Q ss_pred             eeeCCcCceeEEEEEEcC-------------CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          514 CKLGEGGFGPVYKGRLLN-------------GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~-------------g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      +.||+|+||.||+|+...             ...|++|.+..........|.+|+.+++.++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            468999999999997532             2358999887654455568899999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC-------eEEee
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN-------PKISD  653 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~-------~kl~D  653 (675)
                      +||||+++++|+.++..  ....+++..++.++.||++||+|||+++   |+||||||+|||+++++.       +|++|
T Consensus        81 lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d  155 (262)
T cd05077          81 MVEEFVEFGPLDLFMHR--KSDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSD  155 (262)
T ss_pred             EEEecccCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCC
Confidence            99999999999998853  2345889999999999999999999987   999999999999987664       89999


Q ss_pred             eccceecC
Q 005825          654 FGLARMFG  661 (675)
Q Consensus       654 FGla~~~~  661 (675)
                      ||++..+.
T Consensus       156 ~g~~~~~~  163 (262)
T cd05077         156 PGIPITVL  163 (262)
T ss_pred             CCCCcccc
Confidence            99997664

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.87  E-value=9.4e-22  Score=217.14  Aligned_cols=149  Identities=23%  Similarity=0.413  Sum_probs=122.4

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--------
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--------  576 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--------  576 (675)
                      ...+|++.++||+|+||.||+|... +++.||||++....    ....+|+.++++++||||+++++++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            4568999999999999999999874 58899999886422    2345799999999999999999887432        


Q ss_pred             CeEEEEEEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-CeEEeee
Q 005825          577 GEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDF  654 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DF  654 (675)
                      ...++||||+++ +|.+++... .....+++.....++.||+.||+|||+++   |+||||||+|||++.++ .+||+||
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DF  215 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDF  215 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeecc
Confidence            136789999985 666665321 23456889999999999999999999987   99999999999998664 7999999


Q ss_pred             ccceecCC
Q 005825          655 GLARMFGG  662 (675)
Q Consensus       655 Gla~~~~~  662 (675)
                      |+|+.+..
T Consensus       216 Gla~~~~~  223 (440)
T PTZ00036        216 GSAKNLLA  223 (440)
T ss_pred             ccchhccC
Confidence            99987743

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.87  E-value=1.4e-21  Score=202.94  Aligned_cols=145  Identities=41%  Similarity=0.559  Sum_probs=126.6

Q ss_pred             ceeeeeCCcCceeEEEEEE-----cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeEEEE
Q 005825          511 SMECKLGEGGFGPVYKGRL-----LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEKILI  582 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~~lV  582 (675)
                      +..+.||+|+||+||++..     .+++.||+|.++... ....+.|.+|+.++++++||||+++++++...  ...++|
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            7789999999999988653     357889999997543 23456789999999999999999999998764  357899


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++..    ..+++..+..++.|+++||+|||+++   |+||||||+|||+++++.+||+|||+++.+..
T Consensus        87 ~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080          87 MEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             ecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccCC
Confidence            999999999999843    24899999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.87  E-value=1.1e-21  Score=202.52  Aligned_cols=150  Identities=31%  Similarity=0.463  Sum_probs=131.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCcc-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ++|+..+.||+|+||.||+|+..      +.+.|++|.+...... ..+++..|+.++++++||||+++++++.+.+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            57888899999999999999853      2467999988754333 4578999999999999999999999999989999


Q ss_pred             EEEEecCCCCHHHHhcCCCCc------ccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeee
Q 005825          581 LILEYMPNKSLDVFLFDPTKK------RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDF  654 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DF  654 (675)
                      +||||+++++|.+++......      ..+++..+..++.|++.||+|||+.+   |+||||||+||++++++.+||+||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence            999999999999998643311      25899999999999999999999987   999999999999999999999999


Q ss_pred             ccceec
Q 005825          655 GLARMF  660 (675)
Q Consensus       655 Gla~~~  660 (675)
                      |+++..
T Consensus       162 ~~~~~~  167 (275)
T cd05046         162 SLSKDV  167 (275)
T ss_pred             cccccc
Confidence            998754

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.87  E-value=1.6e-21  Score=200.46  Aligned_cols=152  Identities=27%  Similarity=0.453  Sum_probs=132.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+|+.. +++.||||.++..   .......+.+|+.++++++||||+++++++.+.+..++||
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            57889999999999999999864 6899999987642   2233457889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++++|.+++.... ....+++.....++.|++.||+|||+++   ++|+||||+||+++.++.++|+|||+++.+..
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence            9999999998885322 2345788889999999999999999987   99999999999999999999999999987653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.87  E-value=1.5e-21  Score=198.51  Aligned_cols=143  Identities=31%  Similarity=0.488  Sum_probs=127.5

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCHH
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLD  592 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~  592 (675)
                      ++||+|+||.||+|...+++.+|+|.++.... .....|.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            36999999999999988889999999876433 23457889999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          593 VFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       593 ~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++...  ...+++..++.++.+++.||.|||+++   ++||||||+||++++++.+||+|||+++...
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~  144 (250)
T cd05085          81 SFLRKK--KDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQED  144 (250)
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecc
Confidence            988532  345789999999999999999999987   9999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.87  E-value=1.7e-21  Score=198.72  Aligned_cols=151  Identities=29%  Similarity=0.437  Sum_probs=133.8

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|++.+.||+|++|.||+++.. +++.|++|.+...  .....+++..|++++++++||||+++++++.+.+..++||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            4778899999999999999874 5889999998643  234567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++... ....+++.....++.+++.||.|||+.+   ++|+||||+||++++++.+||+|||+++.+...
T Consensus        81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~  154 (256)
T cd08529          81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence            9999999998643 2346889999999999999999999987   999999999999999999999999999977543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.87  E-value=9.4e-22  Score=205.86  Aligned_cols=150  Identities=34%  Similarity=0.565  Sum_probs=129.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-C--cEEEEEEecCc-CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-G--EEVAVKRLSSQ-SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g--~~vAvK~l~~~-~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ++|++.+.||+|+||.||+|...+ +  ..+++|.++.. .....+.|..|+.++.++ +||||+++++++.+.+..++|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            578889999999999999998743 3  34788888743 233456789999999999 799999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCe
Q 005825          583 LEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP  649 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~  649 (675)
                      |||+++++|.+++....             ....+++..+..++.|++.||+|||+++   |+||||||+|||+++++.+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~  158 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS  158 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence            99999999999985421             1235888999999999999999999987   9999999999999999999


Q ss_pred             EEeeeccceec
Q 005825          650 KISDFGLARMF  660 (675)
Q Consensus       650 kl~DFGla~~~  660 (675)
                      ||+|||+++..
T Consensus       159 kl~dfg~~~~~  169 (297)
T cd05089         159 KIADFGLSRGE  169 (297)
T ss_pred             EECCcCCCccc
Confidence            99999998743

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.87  E-value=2.3e-21  Score=198.98  Aligned_cols=152  Identities=30%  Similarity=0.469  Sum_probs=134.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+|... +++.||+|.++..   .....+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            57899999999999999999876 7899999988642   2233568999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++++|..++... .....+++.++..++.+++.||+|||+.+   |+||||||+||++++++.+||+|||+++.+..
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence            999999999988542 22456889999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.87  E-value=1.4e-21  Score=201.13  Aligned_cols=151  Identities=32%  Similarity=0.594  Sum_probs=132.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-C---cEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-G---EEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-g---~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|+..+.||+|+||.||+|+... +   ..+|+|.++... ....+.+..|+.++++++||||+++.+++.+.+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            3578888999999999999998743 3   379999987542 3345679999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++++|.+++..  ....+++.++..++.+++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+.
T Consensus        84 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  158 (268)
T cd05063          84 ITEYMENGALDKYLRD--HDGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLE  158 (268)
T ss_pred             EEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecc
Confidence            9999999999999853  2346889999999999999999999987   9999999999999999999999999998774


Q ss_pred             C
Q 005825          662 G  662 (675)
Q Consensus       662 ~  662 (675)
                      .
T Consensus       159 ~  159 (268)
T cd05063         159 D  159 (268)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.87  E-value=1.4e-21  Score=206.27  Aligned_cols=152  Identities=34%  Similarity=0.549  Sum_probs=131.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc--------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeC
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL--------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQ  576 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~  576 (675)
                      .++|.+.++||+|+||.||+++..        ....+|+|.++... .....++..|+.+++++ +||||+++++++.+.
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            357888999999999999999742        24579999987532 23456788999999999 699999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE
Q 005825          577 GEKILILEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL  643 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl  643 (675)
                      +..++||||+++|+|.+++....             ....+++.+...++.|++.||.|||+++   |+||||||+|||+
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill  167 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLV  167 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEE
Confidence            99999999999999999985421             1245889999999999999999999987   9999999999999


Q ss_pred             cCCCCeEEeeeccceecC
Q 005825          644 DRDMNPKISDFGLARMFG  661 (675)
Q Consensus       644 ~~~~~~kl~DFGla~~~~  661 (675)
                      ++++.+||+|||+++.+.
T Consensus       168 ~~~~~~kL~Dfg~~~~~~  185 (314)
T cd05099         168 TEDNVMKIADFGLARGVH  185 (314)
T ss_pred             cCCCcEEEcccccccccc
Confidence            999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.87  E-value=1.5e-21  Score=203.79  Aligned_cols=148  Identities=33%  Similarity=0.538  Sum_probs=133.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      +.|++.++||+|+||.||+|+.. +++.+++|.+........+.+..|+.++++++||||+++++.+..++..++||||+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            67888899999999999999875 48899999998766666778999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++++|..++...  ...+++..+..++.|+++||+|||+.+   ++||||||+||+++.++.+||+|||+++..
T Consensus        92 ~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  160 (292)
T cd06644          92 PGGAVDAIMLEL--DRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKN  160 (292)
T ss_pred             CCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceec
Confidence            999999887432  345889999999999999999999887   999999999999999999999999998764

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.87  E-value=1e-21  Score=204.46  Aligned_cols=152  Identities=32%  Similarity=0.534  Sum_probs=132.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .++|++.+.||+|+||.||+++..      ++..||+|.++... ....++|.+|+.++++++||||+++++++.+.+..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            467888999999999999999863      46789999987542 23456799999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCC-------------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCC
Q 005825          580 ILILEYMPNKSLDVFLFDPT-------------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASN  640 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~N  640 (675)
                      ++||||+++++|.+++....                   ....+++.+++.++.|++.||+|||+.+   ++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence            99999999999999985321                   1234788889999999999999999987   9999999999


Q ss_pred             EEEcCCCCeEEeeeccceecC
Q 005825          641 VLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       641 ILl~~~~~~kl~DFGla~~~~  661 (675)
                      |++++++.+||+|||+++.+.
T Consensus       161 il~~~~~~~~l~dfg~~~~~~  181 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIY  181 (288)
T ss_pred             eEecCCCceEECccccceecc
Confidence            999999999999999998653

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.87  E-value=2.7e-21  Score=197.35  Aligned_cols=151  Identities=23%  Similarity=0.377  Sum_probs=133.5

Q ss_pred             CcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|+..+.||+|+||.||.++. .+++.+++|.+...  .....+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            588899999999999999975 45889999987643  234456789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++.... ...+++.++..++.|++.||+|||+.+   ++|+||||+||++++++.+||+|||+++.+...
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~  154 (256)
T cd08221          81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE  154 (256)
T ss_pred             cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence            99999999985432 346789999999999999999999887   999999999999999999999999999877443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.87  E-value=1.3e-21  Score=203.33  Aligned_cols=159  Identities=26%  Similarity=0.357  Sum_probs=134.3

Q ss_pred             HHHHHHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEE---
Q 005825          500 LASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCI---  574 (675)
Q Consensus       500 ~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~---  574 (675)
                      +..+....++|++.+.||+|+||.||+++.. +++.+|+|.++.. .....++..|+.++.++ +||||+++++++.   
T Consensus        10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   88 (286)
T cd06638          10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD   88 (286)
T ss_pred             eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence            3445567789999999999999999999864 5789999988652 22346788999999999 6999999999984   


Q ss_pred             --eCCeEEEEEEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEE
Q 005825          575 --EQGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI  651 (675)
Q Consensus       575 --~~~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl  651 (675)
                        .++..++||||+++++|.+++... .....+++.....++.|+++||.|||+.+   |+||||||+||++++++.+||
T Consensus        89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl  165 (286)
T cd06638          89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKL  165 (286)
T ss_pred             cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEE
Confidence              345689999999999999887532 22346788889999999999999999987   999999999999999999999


Q ss_pred             eeeccceecCC
Q 005825          652 SDFGLARMFGG  662 (675)
Q Consensus       652 ~DFGla~~~~~  662 (675)
                      +|||+++.+..
T Consensus       166 ~dfg~~~~~~~  176 (286)
T cd06638         166 VDFGVSAQLTS  176 (286)
T ss_pred             ccCCceeeccc
Confidence            99999987643

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.87  E-value=1.9e-21  Score=199.21  Aligned_cols=150  Identities=32%  Similarity=0.486  Sum_probs=132.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.++||+|+||.||++...++..+|+|.++.. ....+.|.+|+.++++++|+||+++.+.+.+ ...+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~   82 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM   82 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence            4688999999999999999999877888999998753 3345678999999999999999999999887 7789999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++++|.+++... ....+++..++.++.+++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  154 (260)
T cd05073          83 AKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIED  154 (260)
T ss_pred             CCCcHHHHHHhC-CccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence            999999998543 2345788899999999999999999887   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.87  E-value=1.4e-21  Score=210.34  Aligned_cols=147  Identities=29%  Similarity=0.386  Sum_probs=125.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-----
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-----  577 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-----  577 (675)
                      ..++|++.+.||+|+||.||+++.. +++.||||+++..  ......++.+|+.+++.++||||+++++++...+     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            4578999999999999999999864 5899999999753  2234567889999999999999999999986543     


Q ss_pred             -eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecc
Q 005825          578 -EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL  656 (675)
Q Consensus       578 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGl  656 (675)
                       ..++||||+++ +|...+.     ..+++.....++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~  169 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  169 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCC
Confidence             57999999976 4555552     23678888899999999999999987   99999999999999999999999999


Q ss_pred             ceecC
Q 005825          657 ARMFG  661 (675)
Q Consensus       657 a~~~~  661 (675)
                      |+...
T Consensus       170 a~~~~  174 (359)
T cd07876         170 ARTAC  174 (359)
T ss_pred             ccccc
Confidence            98653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.87  E-value=1.9e-21  Score=198.39  Aligned_cols=147  Identities=41%  Similarity=0.627  Sum_probs=130.9

Q ss_pred             eeeCCcCceeEEEEEEcC----CcEEEEEEecCcCcc-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      ++||+|+||.||+++...    +..||+|.++..... ..+.+..|++++..++|+||+++++++......++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            469999999999998754    788999999864333 367899999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCC------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          589 KSLDVFLFDPTK------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       589 gsL~~~l~~~~~------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++|.+++.....      ...+++..+..++.|+++||+|||+++   ++||||||+||++++++.+||+|||+++.+..
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence            999999965321      367899999999999999999999987   99999999999999999999999999998865


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       158 ~  158 (262)
T cd00192         158 D  158 (262)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.87  E-value=1.6e-21  Score=198.97  Aligned_cols=148  Identities=33%  Similarity=0.498  Sum_probs=131.1

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-----ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-----GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      +|+..+.||+|+||.||+|... +++.|++|.+....     .+..+.+.+|+.++++++|+||+++++++...+..++|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            3667789999999999999875 68999999886432     22456799999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++..   ...+++.....++.|++.||+|||+.+   |+|+||+|+||++++++.+||+|||+++....
T Consensus        81 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~  154 (258)
T cd06632          81 LELVPGGSLAKLLKK---YGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVE  154 (258)
T ss_pred             EEecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            999999999999843   345788999999999999999999987   99999999999999999999999999987643

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.87  E-value=1.6e-21  Score=207.83  Aligned_cols=152  Identities=32%  Similarity=0.534  Sum_probs=130.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC--------CcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN--------GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQG  577 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~  577 (675)
                      .+|.+.+.||+|+||.||+++...        ...||+|.++... ....+++..|+.++.++ +||||+++++++.+.+
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   91 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   91 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence            468888999999999999997421        2368999887532 23456899999999999 7999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc
Q 005825          578 EKILILEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD  644 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~  644 (675)
                      ..++||||+++|+|.+++....             ....+.+.+++.++.|++.||+|||+++   |+||||||+|||++
T Consensus        92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~  168 (334)
T cd05100          92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLVT  168 (334)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEc
Confidence            9999999999999999986421             2345788999999999999999999987   99999999999999


Q ss_pred             CCCCeEEeeeccceecCC
Q 005825          645 RDMNPKISDFGLARMFGG  662 (675)
Q Consensus       645 ~~~~~kl~DFGla~~~~~  662 (675)
                      +++.+||+|||+++.+..
T Consensus       169 ~~~~~kL~Dfg~~~~~~~  186 (334)
T cd05100         169 EDNVMKIADFGLARDVHN  186 (334)
T ss_pred             CCCcEEECCcccceeccc
Confidence            999999999999987643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.87  E-value=1.7e-21  Score=204.74  Aligned_cols=146  Identities=23%  Similarity=0.375  Sum_probs=130.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.+.||+|+||.||+++.. .++.||+|.+....   ....+.+.+|+.+++.++||||+++++.+.++++.++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            46888999999999999999864 47899999987542   233467889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ||+++++|.+++..   ...+++.....++.+++.||+|||+.+   ++||||||+||++++++.+||+|||+++.
T Consensus        81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~  150 (305)
T cd05609          81 EYVEGGDCATLLKN---IGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccc
Confidence            99999999999943   346888999999999999999999987   99999999999999999999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.87  E-value=1.8e-21  Score=201.55  Aligned_cols=152  Identities=33%  Similarity=0.520  Sum_probs=131.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC------CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .++|.+.+.||+|+||.||+|...+      +..||+|.+.... ......|..|+.++++++|+||+++++++.+.+..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            4678999999999999999998743      5679999886433 23345799999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCC----CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC---CeEEe
Q 005825          580 ILILEYMPNKSLDVFLFDPT----KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM---NPKIS  652 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~---~~kl~  652 (675)
                      ++||||+++++|.+++....    ....+++..++.++.||+.||+|||+.+   ++||||||+||+++.++   .+||+
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEec
Confidence            99999999999999985432    1235889999999999999999999987   99999999999998754   69999


Q ss_pred             eeccceecC
Q 005825          653 DFGLARMFG  661 (675)
Q Consensus       653 DFGla~~~~  661 (675)
                      |||+++.+.
T Consensus       162 dfg~~~~~~  170 (277)
T cd05036         162 DFGMARDIY  170 (277)
T ss_pred             cCccccccC
Confidence            999998763

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.87  E-value=1.3e-21  Score=207.25  Aligned_cols=142  Identities=23%  Similarity=0.279  Sum_probs=115.3

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc--CCcEEEEEEecCcC-----ccCHHHHHHHHHHHHhcCCCceee-EEEEEEeC
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQS-----GQGLEEFKNEMLLIAKLQHRNLVR-ILGCCIEQ  576 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~--~g~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~H~nIv~-l~g~~~~~  576 (675)
                      ...++|.+.+.||+|+||+||+|+..  +++.||||++....     ....+.|.+|+++|++++|+|++. ++.    .
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~   90 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----T   90 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----c
Confidence            34578999999999999999999764  57788999876331     123456999999999999999985 443    2


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCC-CCCCEEEcCCCCeEEeeec
Q 005825          577 GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDL-KASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl-kp~NILl~~~~~~kl~DFG  655 (675)
                      ++.++||||+++++|....    ...      ...++.++++||.|||+++   |+|||| ||+|||++.++.+||+|||
T Consensus        91 ~~~~LVmE~~~G~~L~~~~----~~~------~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFG  157 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHLAR----PHG------DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQ  157 (365)
T ss_pred             CCcEEEEEccCCCCHHHhC----ccc------hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECc
Confidence            5689999999999996321    111      1357889999999999987   999999 9999999999999999999


Q ss_pred             cceecCCC
Q 005825          656 LARMFGGD  663 (675)
Q Consensus       656 la~~~~~~  663 (675)
                      +|+.+...
T Consensus       158 lA~~~~~~  165 (365)
T PRK09188        158 LASVFRRR  165 (365)
T ss_pred             cceecccC
Confidence            99987543

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=2.3e-21  Score=199.19  Aligned_cols=148  Identities=34%  Similarity=0.556  Sum_probs=129.9

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCcc---------CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQ---------GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~---------~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      +|.+.+.||+|+||.||+|... +++.+|+|.+......         ..+.+..|+.++++++||||+++++++.+.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            3567789999999999999864 5889999988653222         23568899999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++||||+++++|..++..   ...+++.....++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++
T Consensus        81 ~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~  154 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNN---YGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISK  154 (267)
T ss_pred             cEEEEEecCCCCHHHHHHh---ccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCc
Confidence            9999999999999999943   356788889999999999999999987   9999999999999999999999999998


Q ss_pred             ecCC
Q 005825          659 MFGG  662 (675)
Q Consensus       659 ~~~~  662 (675)
                      .+..
T Consensus       155 ~~~~  158 (267)
T cd06628         155 KLEA  158 (267)
T ss_pred             cccc
Confidence            7753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=3.2e-22  Score=212.15  Aligned_cols=148  Identities=24%  Similarity=0.383  Sum_probs=129.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ..-|..++.||-|+||+|.+++.. +...+|+|.|++.+   ......++.|-+||+..+.+-||+|+-.|++++.+|+|
T Consensus       628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV  707 (1034)
T KOG0608|consen  628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV  707 (1034)
T ss_pred             ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence            356777889999999999999754 46789999998653   34566788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |||++||++-.+|   .+.+.+++..+..++..++.|+++.|..+   +|||||||+|||||.+|++||+||||+.-+
T Consensus       708 MdYIPGGDmMSLL---IrmgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGf  779 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLL---IRMGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGF  779 (1034)
T ss_pred             EeccCCccHHHHH---HHhccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccc
Confidence            9999999999998   34566777776666777999999999998   999999999999999999999999998644

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=2.8e-21  Score=197.70  Aligned_cols=150  Identities=29%  Similarity=0.510  Sum_probs=135.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .++|++.+.||+|+||.||++... +++.+|+|.+........+.+..|+.++++++||||+++++++...+..+++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            367899999999999999999864 5788999999865555678899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++++|.+++...  ...+++.+...++.|++.||+|||+++   |+|+||||+||++++++.+||+|||++..+.
T Consensus        82 ~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  152 (262)
T cd06613          82 CGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLT  152 (262)
T ss_pred             CCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhh
Confidence            9999999988432  246889999999999999999999987   9999999999999999999999999998664

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.87  E-value=9.4e-22  Score=212.37  Aligned_cols=147  Identities=30%  Similarity=0.406  Sum_probs=128.3

Q ss_pred             CcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-C-----CceeeEEEEEEeCCeEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-H-----RNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H-----~nIv~l~g~~~~~~~~~l  581 (675)
                      +|.+.+.||+|+||.|.+|.. .+++.||||+++.+ ....++-..|+.+|..|+ |     -|+|+++++|...++.+|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            889999999999999999976 45999999999863 445566788999999997 4     489999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC--CCeEEeeecccee
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD--MNPKISDFGLARM  659 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~--~~~kl~DFGla~~  659 (675)
                      |+|.+ .-+|.++++.. +...++......|+.||+.||.+||+.+   |||+|||||||||-+.  ..+||+|||.|..
T Consensus       266 VfELL-~~NLYellK~n-~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~  340 (586)
T KOG0667|consen  266 VFELL-STNLYELLKNN-KFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCF  340 (586)
T ss_pred             eehhh-hhhHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccc
Confidence            99988 67899999764 3445888999999999999999999887   9999999999999653  3799999999987


Q ss_pred             cC
Q 005825          660 FG  661 (675)
Q Consensus       660 ~~  661 (675)
                      ..
T Consensus       341 ~~  342 (586)
T KOG0667|consen  341 ES  342 (586)
T ss_pred             cC
Confidence            54

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.87  E-value=2.2e-21  Score=203.48  Aligned_cols=148  Identities=30%  Similarity=0.443  Sum_probs=129.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.++||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            57899999999999999999865 58899999987432 33345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++ ++|..++...  ...+++.....++.||++||+|||+.+   |+|+||||+||++++++.+||+|||+++...
T Consensus        86 ~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  155 (301)
T cd07873          86 LD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKS  155 (301)
T ss_pred             cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence            97 5888888542  335788899999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.87  E-value=2.6e-22  Score=206.20  Aligned_cols=157  Identities=27%  Similarity=0.336  Sum_probs=138.4

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ...+.|+..++||+|+||.||-++.+ +|+.+|.|++.++   ..++....++|-.+|.+++.+.||.|--.+..++.++
T Consensus       182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC  261 (591)
T KOG0986|consen  182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC  261 (591)
T ss_pred             ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence            34577888899999999999999764 5999999988653   2345566788999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||+..|+||+|.-+|.... ...+++...+-++.+|+.||++||.+.   |+.|||||+|||||+.|+++|+|+|||..+
T Consensus       262 lVLtlMNGGDLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei  337 (591)
T KOG0986|consen  262 LVLTLMNGGDLKFHIYNHG-NPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEI  337 (591)
T ss_pred             EEEEeecCCceeEEeeccC-CCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEec
Confidence            9999999999998886543 356888888999999999999999887   999999999999999999999999999998


Q ss_pred             CCCcc
Q 005825          661 GGDEL  665 (675)
Q Consensus       661 ~~~~~  665 (675)
                      .+.+.
T Consensus       338 ~~g~~  342 (591)
T KOG0986|consen  338 PEGKP  342 (591)
T ss_pred             CCCCc
Confidence            76654

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=6.5e-23  Score=230.63  Aligned_cols=169  Identities=25%  Similarity=0.280  Sum_probs=143.2

Q ss_pred             HHHHHHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe
Q 005825          500 LASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE  575 (675)
Q Consensus       500 ~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~  575 (675)
                      ..++....++|.+.++||+|+||.|..++.. .++.+|+|++.+-   ......-|+.|-++|.--..+-|+.|+-.|++
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            3445566789999999999999999999875 5889999999862   33455679999999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      ..++|+|||||+||+|-.++...   ..+++.-+..++..|.-||.-||+.|   +|||||||+|||||..|++||+|||
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~---~~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFG  220 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKF---DRLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFG  220 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhc---CCChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccch
Confidence            99999999999999999999433   35777766667777999999999988   9999999999999999999999999


Q ss_pred             cceecCCCcccCCCCceecC
Q 005825          656 LARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       656 la~~~~~~~~~~~~~~~~GT  675 (675)
                      -+-.+..+..-. ....|||
T Consensus       221 sClkm~~dG~V~-s~~aVGT  239 (1317)
T KOG0612|consen  221 SCLKMDADGTVR-SSVAVGT  239 (1317)
T ss_pred             hHHhcCCCCcEE-eccccCC
Confidence            998887666422 2235777

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.87  E-value=1.9e-21  Score=201.38  Aligned_cols=149  Identities=35%  Similarity=0.568  Sum_probs=130.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-Cc----EEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-GE----EVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g~----~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .+|++.+.||+|+||.||+|...+ ++    .+|+|.+..... ....++.+|+.++++++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            577888999999999999998643 33    689998875432 345678999999999999999999999987 78999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++|+|.+++...  ...+++.....++.||+.||+|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        86 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057          86 ITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             EEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCccccccc
Confidence            99999999999998542  334889999999999999999999987   9999999999999999999999999998775


Q ss_pred             C
Q 005825          662 G  662 (675)
Q Consensus       662 ~  662 (675)
                      .
T Consensus       161 ~  161 (279)
T cd05057         161 V  161 (279)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=2.3e-21  Score=199.83  Aligned_cols=147  Identities=32%  Similarity=0.457  Sum_probs=128.6

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc----------cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG----------QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG  577 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~----------~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~  577 (675)
                      +|...+.||+|+||.||+|... +++.||+|.++....          ...+.+..|+.++++++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            4667789999999999999764 588999998763211          11346888999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      ..++||||+++++|.+++..   ...+++..+..++.||+.||.|||+++   ++||||||+||++++++.+||+|||++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~  155 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRT---YGRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS  155 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence            99999999999999999853   356888999999999999999999987   999999999999999999999999999


Q ss_pred             eecC
Q 005825          658 RMFG  661 (675)
Q Consensus       658 ~~~~  661 (675)
                      +...
T Consensus       156 ~~~~  159 (272)
T cd06629         156 KKSD  159 (272)
T ss_pred             cccc
Confidence            8764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.87  E-value=5.2e-21  Score=195.30  Aligned_cols=150  Identities=23%  Similarity=0.416  Sum_probs=132.2

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      +|++.++||+|+||.||++... +++.+|+|.++.. .....+.+..|+.++++++|+||+++++.+.+++..++||||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            4788899999999999999864 5889999998643 2344577889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++++|.+++... ....+++.....++.|++.||.|||+++   |+|+||||+||++++++.++|+|||+++.+..
T Consensus        81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  152 (255)
T cd08219          81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTS  152 (255)
T ss_pred             CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecc
Confidence            999999988532 3345788889999999999999999987   99999999999999999999999999987744

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.87  E-value=2.1e-21  Score=203.00  Aligned_cols=148  Identities=32%  Similarity=0.467  Sum_probs=130.8

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCcc-----CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQ-----GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      +|++.+.||+|+||.||+|... +++.||||.++.....     ....+..|++++++++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            4778899999999999999864 5899999999754322     234677899999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+ +++|.+++....  ..+++..+..++.||++||.|||+++   |+|+||||+||+++.++.+||+|||+++.+..
T Consensus        81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            9999 999999985422  36899999999999999999999987   99999999999999999999999999987754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.87  E-value=1.7e-21  Score=199.25  Aligned_cols=142  Identities=32%  Similarity=0.525  Sum_probs=123.7

Q ss_pred             eeCCcCceeEEEEEE---cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCC
Q 005825          515 KLGEGGFGPVYKGRL---LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNK  589 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~---~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g  589 (675)
                      +||+|+||.||+|.+   .+++.+|+|+++...  ....+++..|+.++++++||||+++++++. .+..++||||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            689999999999965   357889999987543  234567999999999999999999999875 45678999999999


Q ss_pred             CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          590 SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       590 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +|.+++..   ...+++.....++.|++.||+|||+++   |+||||||+||++++++.+||+|||+++.+...
T Consensus        81 ~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~  148 (257)
T cd05116          81 PLNKFLQK---NKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             cHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCC
Confidence            99999843   346889999999999999999999987   999999999999999999999999999877543

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.87  E-value=2e-21  Score=199.61  Aligned_cols=146  Identities=30%  Similarity=0.520  Sum_probs=129.8

Q ss_pred             CcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCc------cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG------QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~------~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      +|...+.||+|+||+||+|...+++.+|||.++....      ...+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            4677889999999999999888899999999874321      1235688999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |||+++++|.+++.+   ...+++.....++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||+++.+
T Consensus        81 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          81 MEFVPGGSISSILNR---FGPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            999999999999843   345788888999999999999999987   999999999999999999999999999865

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.87  E-value=1.9e-22  Score=215.83  Aligned_cols=156  Identities=32%  Similarity=0.470  Sum_probs=131.0

Q ss_pred             eeeeeCCcCceeEEEEEEc-CCcEEEEEEecC----cCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe--EEEEEE
Q 005825          512 MECKLGEGGFGPVYKGRLL-NGEEVAVKRLSS----QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE--KILILE  584 (675)
Q Consensus       512 ~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~----~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~--~~lV~E  584 (675)
                      ..++||+|+|-+||+|.+. +|.+||--.++.    +.+...++|..|+.+|+.|+|||||+++..+.+...  ..+|+|
T Consensus        44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE  123 (632)
T KOG0584|consen   44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE  123 (632)
T ss_pred             hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence            3468999999999999764 477887443331    245566899999999999999999999999987665  789999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-CCCeEEeeeccceecCCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-DMNPKISDFGLARMFGGD  663 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~  663 (675)
                      +|..|+|..|+.   +.+....+....+++||++||.|||.+. +||||||||.+||+|+. .|.|||+|+|||.++...
T Consensus       124 L~TSGtLr~Y~k---k~~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s  199 (632)
T KOG0584|consen  124 LFTSGTLREYRK---KHRRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS  199 (632)
T ss_pred             cccCCcHHHHHH---HhccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence            999999999994   4556788899999999999999999985 68999999999999974 689999999999998654


Q ss_pred             cccCCCCceecC
Q 005825          664 ELQGNTKRIVGT  675 (675)
Q Consensus       664 ~~~~~~~~~~GT  675 (675)
                      ..    +.++||
T Consensus       200 ~a----ksvIGT  207 (632)
T KOG0584|consen  200 HA----KSVIGT  207 (632)
T ss_pred             cc----ceeccC
Confidence            42    346777

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.87  E-value=3.7e-21  Score=196.40  Aligned_cols=149  Identities=30%  Similarity=0.552  Sum_probs=132.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      .+|++.+.||+|+||.||++...+++.+|+|.++.. .....+|..|++++++++||||+++++++......++||||++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            478888999999999999998877889999998753 3345679999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++|.+++...  ...+++.....++.+++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++....
T Consensus        83 ~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  152 (256)
T cd05112          83 HGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLD  152 (256)
T ss_pred             CCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeeccc
Confidence            99999998532  235788999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.87  E-value=3e-21  Score=202.10  Aligned_cols=150  Identities=28%  Similarity=0.457  Sum_probs=135.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ..+|++.++||.|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++.+...+..++|+||
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   97 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY   97 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence            35799999999999999999975 56899999999765555567889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|..++..    ..+++.++..++.+++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+...
T Consensus        98 ~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~  168 (296)
T cd06655          98 LAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE  168 (296)
T ss_pred             cCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence            999999998842    35789999999999999999999987   999999999999999999999999999876443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.86  E-value=2.5e-21  Score=200.65  Aligned_cols=149  Identities=34%  Similarity=0.542  Sum_probs=131.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-----CCcEEEEEEecCcCcc-CHHHHHHHHHHHHhcCCCceeeEEEEEEe--CCeE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIE--QGEK  579 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-----~g~~vAvK~l~~~~~~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~--~~~~  579 (675)
                      +.|++.+.||+|+||.||+++..     .++.+|||.++..... ..+.|..|+.++++++||||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            45777799999999999999853     3689999999864332 46789999999999999999999999887  5578


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++...  ...+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++.
T Consensus        84 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKV  158 (284)
T ss_pred             EEEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccc
Confidence            9999999999999999542  235899999999999999999999987   99999999999999999999999999998


Q ss_pred             cC
Q 005825          660 FG  661 (675)
Q Consensus       660 ~~  661 (675)
                      +.
T Consensus       159 ~~  160 (284)
T cd05038         159 LP  160 (284)
T ss_pred             cc
Confidence            75

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.86  E-value=1.8e-21  Score=209.24  Aligned_cols=148  Identities=28%  Similarity=0.378  Sum_probs=125.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC------
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ------  576 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~------  576 (675)
                      ..++|++.+.||+|+||.||+++.. .++.||||++....  ....+.+.+|+.+++.++||||+++++++...      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            4578999999999999999999764 58899999997532  23346788899999999999999999998643      


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecc
Q 005825          577 GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL  656 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGl  656 (675)
                      ...++||||+++ +|...+.     ..+++..+..++.|+++||+|||+++   |+||||||+|||+++++.+||+|||+
T Consensus        95 ~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~  165 (355)
T cd07874          95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  165 (355)
T ss_pred             ceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcc
Confidence            357999999975 5666552     24778888899999999999999987   99999999999999999999999999


Q ss_pred             ceecCC
Q 005825          657 ARMFGG  662 (675)
Q Consensus       657 a~~~~~  662 (675)
                      |+....
T Consensus       166 ~~~~~~  171 (355)
T cd07874         166 ARTAGT  171 (355)
T ss_pred             cccCCC
Confidence            987643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.86  E-value=3.4e-21  Score=200.85  Aligned_cols=149  Identities=31%  Similarity=0.392  Sum_probs=128.6

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++++|.+.+.||+|+||.||+|... +++.||+|.+..... .....+.+|+.++++++|+||+++.+++..++..++||
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            4578999999999999999999864 588999999875432 23346788999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||++ ++|..++...  ...+.+.....++.|++.||+|||+.+   |+|+||||+|||++.++.+||+|||+++..
T Consensus        83 e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870          83 EYMH-TDLAQYMIQH--PGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAK  153 (291)
T ss_pred             eccc-CCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEecccccccc
Confidence            9996 6776666432  234678888889999999999999987   999999999999999999999999999865

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.86  E-value=4.1e-21  Score=196.28  Aligned_cols=148  Identities=32%  Similarity=0.539  Sum_probs=129.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEe-CCeEEEEEEec
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE-QGEKILILEYM  586 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~-~~~~~lV~Ey~  586 (675)
                      .+|++.+.||+|+||.||++... +..||+|.++..  ...+.|.+|+.++++++|+|++++++++.+ .+..++||||+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            47888899999999999999764 778999998743  335679999999999999999999998654 45789999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++++|.+++... ....+++...+.++.+++.||+|||+++   ++||||||+||++++++.+||+|||+++....
T Consensus        83 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~  154 (256)
T cd05082          83 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  154 (256)
T ss_pred             CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccc
Confidence            999999998542 2335789999999999999999999987   99999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.86  E-value=3.1e-21  Score=203.84  Aligned_cols=143  Identities=27%  Similarity=0.458  Sum_probs=118.6

Q ss_pred             eeeCCcCceeEEEEEEc---CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEe--CCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL---NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE--QGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~--~~~~~lV~Ey~~~  588 (675)
                      ++||+|+||.||+|+..   +++.||+|.++..  .....+.+|+.++++++||||+++++++..  ....++||||+++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH   84 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence            68999999999999864   4678999998753  223567889999999999999999999864  3468899999864


Q ss_pred             CCHHHHhcCC------CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE----cCCCCeEEeeeccce
Q 005825          589 KSLDVFLFDP------TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL----DRDMNPKISDFGLAR  658 (675)
Q Consensus       589 gsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DFGla~  658 (675)
                       +|..++...      .....+++.....++.||+.||.|||+++   |+||||||+|||+    +..+.+||+|||+|+
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07868          85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence             777776421      12235788889999999999999999987   9999999999999    456789999999999


Q ss_pred             ecCC
Q 005825          659 MFGG  662 (675)
Q Consensus       659 ~~~~  662 (675)
                      .+..
T Consensus       161 ~~~~  164 (317)
T cd07868         161 LFNS  164 (317)
T ss_pred             ccCC
Confidence            8754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.86  E-value=2.6e-23  Score=198.09  Aligned_cols=152  Identities=28%  Similarity=0.416  Sum_probs=129.9

Q ss_pred             hcCCcceeeeeCCcCceeEEEEE-EcCCcEEEEEEecC--cCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~-~~~g~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++.|++-+.||+|.|+.||++. .++|+.+|+|.+..  -+....+++.+|+.|-+.|+|||||+|.....+....+||
T Consensus         9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv   88 (355)
T KOG0033|consen    9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   88 (355)
T ss_pred             cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence            34678888999999999999995 46799999998753  2344778899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEeeecccee
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGLARM  659 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DFGla~~  659 (675)
                      +|+|.|++|..-+-   .+..+++...-..++||+.||.|+|.++   |||||+||+|+||..   ..-+||+|||+|..
T Consensus        89 Fe~m~G~dl~~eIV---~R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~  162 (355)
T KOG0033|consen   89 FDLVTGGELFEDIV---AREFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIE  162 (355)
T ss_pred             EecccchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEE
Confidence            99999999965552   2345677778889999999999999998   999999999999943   45689999999999


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +++.
T Consensus       163 l~~g  166 (355)
T KOG0033|consen  163 VNDG  166 (355)
T ss_pred             eCCc
Confidence            9843

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.86  E-value=3.9e-21  Score=195.64  Aligned_cols=143  Identities=35%  Similarity=0.527  Sum_probs=128.1

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCcc-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCHH
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLD  592 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~  592 (675)
                      ++||+|+||.||++...+++.||+|.++..... ..+.+.+|++++++++|+||+++++++.+....++||||+++++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            479999999999999877999999998764333 4568999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          593 VFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       593 ~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++...  ...+++...+.++.+++.||+|||+++   ++||||||+||+++.++.+||+|||+++...
T Consensus        81 ~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~  144 (251)
T cd05041          81 TFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEE  144 (251)
T ss_pred             HHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeecccccccc
Confidence            998542  235788899999999999999999987   9999999999999999999999999998664

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.86  E-value=3.7e-21  Score=200.52  Aligned_cols=147  Identities=31%  Similarity=0.447  Sum_probs=129.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.++||+|++|.||+|+.. +++.||||.+..... .....+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            67899999999999999999875 588999999875332 2335577899999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +++ +|.+++...  ...+++.....++.|++.||.|||+.+   |+||||||+||++++++.+||+|||+++..
T Consensus        85 ~~~-~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844          85 LDT-DLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAK  153 (291)
T ss_pred             CCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECcccccccc
Confidence            985 898888542  235788899999999999999999987   999999999999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.86  E-value=2.3e-21  Score=198.03  Aligned_cols=144  Identities=35%  Similarity=0.469  Sum_probs=127.5

Q ss_pred             eeeCCcCceeEEEEEEcC--C--cEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLLN--G--EEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~--g--~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      ++||+|++|.||+|.+.+  +  ..||||.++.... ...+.+..|+.++++++||||+++++.+.. ...++||||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999998643  3  3699999987554 556789999999999999999999999988 889999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++|.+++..... ..+++.....++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~  149 (257)
T cd05040          80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQ  149 (257)
T ss_pred             CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccc
Confidence            999999865332 46899999999999999999999987   99999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.86  E-value=1.5e-21  Score=200.60  Aligned_cols=152  Identities=28%  Similarity=0.460  Sum_probs=133.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.+.||+|+||.||+++. .+++.+|||.+....   .....++.+|+.+++.++||||+++++++.+.+..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4678889999999999999985 578999999886432   233467889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++++|.+++... .....+++.....++.+|+.||+|||+++   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence            999999999988532 22456889999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.86  E-value=1.7e-21  Score=202.27  Aligned_cols=149  Identities=26%  Similarity=0.388  Sum_probs=131.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|++.++||+|+||.||+|... +++.||+|++.....  ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            46888999999999999999875 489999999865322  234678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |+++++|..+...   ...+++.++..++.||++||+|||+.+   |+|+||+|+||++++++.+||+|||+++.+..
T Consensus        81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07846          81 FVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA  152 (286)
T ss_pred             cCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence            9999999887632   334889999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.86  E-value=3.3e-21  Score=207.88  Aligned_cols=148  Identities=28%  Similarity=0.380  Sum_probs=126.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC------
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ------  576 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~------  576 (675)
                      ..++|++.+.||+|+||.||+++.. .++.||||++...  .....+.+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            3578999999999999999999864 5889999999753  223456788999999999999999999987543      


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecc
Q 005825          577 GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL  656 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGl  656 (675)
                      ...++||||+++ +|...+.     ..+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~  172 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  172 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCC
Confidence            357999999975 6666662     23778888999999999999999987   99999999999999999999999999


Q ss_pred             ceecCC
Q 005825          657 ARMFGG  662 (675)
Q Consensus       657 a~~~~~  662 (675)
                      |+....
T Consensus       173 a~~~~~  178 (364)
T cd07875         173 ARTAGT  178 (364)
T ss_pred             ccccCC
Confidence            987643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.86  E-value=5e-21  Score=199.55  Aligned_cols=159  Identities=29%  Similarity=0.396  Sum_probs=135.2

Q ss_pred             HHHHHHhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC
Q 005825          500 LASVAAATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQG  577 (675)
Q Consensus       500 ~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~  577 (675)
                      ..++..+.++|++.+.||+|+||.||++.. .+++.+|+|.+... .....++..|+.++.++ +||||+++++++...+
T Consensus        14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~   92 (291)
T cd06639          14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD   92 (291)
T ss_pred             cccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence            344555678999999999999999999987 45889999998753 22346788899999999 7999999999987543


Q ss_pred             -----eEEEEEEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEE
Q 005825          578 -----EKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI  651 (675)
Q Consensus       578 -----~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl  651 (675)
                           ..++||||+++++|.+++... .....+++.....++.|++.||+|||+.+   |+||||||+||++++++.+||
T Consensus        93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~kl  169 (291)
T cd06639          93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVKL  169 (291)
T ss_pred             ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEE
Confidence                 589999999999999988532 22346889999999999999999999887   999999999999999999999


Q ss_pred             eeeccceecCC
Q 005825          652 SDFGLARMFGG  662 (675)
Q Consensus       652 ~DFGla~~~~~  662 (675)
                      +|||+++.+..
T Consensus       170 ~dfg~~~~~~~  180 (291)
T cd06639         170 VDFGVSAQLTS  180 (291)
T ss_pred             eecccchhccc
Confidence            99999987643

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.86  E-value=2e-21  Score=207.74  Aligned_cols=149  Identities=30%  Similarity=0.395  Sum_probs=127.8

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC------
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ------  576 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~------  576 (675)
                      ..++|++.+.||+|+||.||++.. .+++.||||++....  ....+.+.+|+.++++++||||+++++++...      
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            457899999999999999999986 468899999987532  22345678899999999999999999987543      


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecc
Q 005825          577 GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL  656 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGl  656 (675)
                      ...++++|++ +++|..++.    ...+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~  164 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGL  164 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCcc
Confidence            3578999987 789988773    235889999999999999999999987   99999999999999999999999999


Q ss_pred             ceecCC
Q 005825          657 ARMFGG  662 (675)
Q Consensus       657 a~~~~~  662 (675)
                      ++....
T Consensus       165 ~~~~~~  170 (343)
T cd07878         165 ARQADD  170 (343)
T ss_pred             ceecCC
Confidence            987643

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.86  E-value=3.4e-21  Score=198.51  Aligned_cols=150  Identities=29%  Similarity=0.461  Sum_probs=129.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ++|.+.++||+|+||.||+|...+    ...||||...... ....+.+.+|+.++++++||||+++++++.+ +..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv   84 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV   84 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence            567888999999999999998643    3468999887544 3455689999999999999999999999875 567899


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++...  ...+++..+..++.+++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        85 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056          85 MELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             EEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccc
Confidence            9999999999999532  335899999999999999999999987   99999999999999999999999999987644


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       160 ~  160 (270)
T cd05056         160 E  160 (270)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.86  E-value=4.4e-21  Score=196.57  Aligned_cols=148  Identities=32%  Similarity=0.513  Sum_probs=132.9

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|++.+.||+|+||.||+|... +++.||+|.++....  ...+.+..|+.++++++|+||+++++.+...+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            4788899999999999999864 688999999876543  2567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++..   ...+++..+..++.++++||+|||+.+   |+|+||||+||++++++.+||+|||++..+..
T Consensus        81 ~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~  151 (264)
T cd06626          81 CSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKN  151 (264)
T ss_pred             CCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCC
Confidence            999999999843   345788889999999999999999987   99999999999999999999999999987743

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.86  E-value=4.4e-22  Score=208.92  Aligned_cols=139  Identities=34%  Similarity=0.499  Sum_probs=123.5

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCHH
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLD  592 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~  592 (675)
                      ++-||.|+-|.||+|++ .++.||||+++..       =..+|+-|++|+||||+.+.|+|....-++|||||++.|.|.
T Consensus       129 LeWlGSGaQGAVF~Grl-~netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~  200 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRL-HNETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY  200 (904)
T ss_pred             hhhhccCcccceeeeec-cCceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence            46799999999999998 5688999998632       135788999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCcc
Q 005825          593 VFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL  665 (675)
Q Consensus       593 ~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~  665 (675)
                      ..|+   ....+.......+..+||.||.|||.+.   |||||||.-||||+.+..|||+|||-++.+....+
T Consensus       201 ~VLk---a~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST  267 (904)
T KOG4721|consen  201 EVLK---AGRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDKST  267 (904)
T ss_pred             HHHh---ccCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhhhh
Confidence            9994   3456777788889999999999999886   99999999999999999999999999998865543

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.86  E-value=4e-21  Score=200.20  Aligned_cols=148  Identities=28%  Similarity=0.356  Sum_probs=129.8

Q ss_pred             CcceeeeeCCcCceeEEEEEE----cCCcEEEEEEecCcC----ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeE
Q 005825          509 NFSMECKLGEGGFGPVYKGRL----LNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~  579 (675)
                      +|++.+.||+|+||.||+++.    .+|+.||+|+++...    ....+++..|+.++.++ +|+||+++++++......
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            478889999999999999976    368899999987532    22346788999999999 599999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++..   ...+++.....++.|++.||.|||+.+   ++||||||+|||+++++.+||+|||+++.
T Consensus        81 ~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~  154 (290)
T cd05613          81 HLILDYINGGELFTHLSQ---RERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE  154 (290)
T ss_pred             EEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence            999999999999999843   345788888889999999999999987   99999999999999999999999999987


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      +..
T Consensus       155 ~~~  157 (290)
T cd05613         155 FHE  157 (290)
T ss_pred             ccc
Confidence            744

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.86  E-value=5.8e-21  Score=198.07  Aligned_cols=149  Identities=32%  Similarity=0.530  Sum_probs=131.3

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      +|+..++||+|++|.||+|+.. +++.||||.++.... ...+.+..|+.++++++||||+++++++.+.+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            5788999999999999999875 588999999875432 33567788999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++ +|.+++........+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+.
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~  151 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFG  151 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhc
Confidence            85 88888754443456899999999999999999999987   9999999999999999999999999998653

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=2.5e-21  Score=201.15  Aligned_cols=148  Identities=24%  Similarity=0.372  Sum_probs=131.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.++||+|+||+||+++.. +++.||+|.+.... ....+.+.+|+++++.++||||+++++++...+..++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            56788899999999999999864 58899999886543 34457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +++++|..++..   .+.+++.....++.+++.||.|||+.+  +++||||||+||++++++.++|+|||+++.+
T Consensus        85 ~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~  154 (284)
T cd06620          85 MDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGEL  154 (284)
T ss_pred             CCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence            999999998843   346889999999999999999999743  3999999999999999999999999998765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.86  E-value=9e-21  Score=194.43  Aligned_cols=152  Identities=28%  Similarity=0.455  Sum_probs=134.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.+.||+|+||+||+|... ++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+...+..++||||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            47889999999999999999864 57899999987532 33567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++........+++.....++.|++.||+|||+.+   |+|+||||+||++++++.+||+|||++..+..
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~  154 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLAD  154 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence            999999999864333356889999999999999999999987   99999999999999999999999999987644

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.86  E-value=6.1e-21  Score=198.43  Aligned_cols=149  Identities=30%  Similarity=0.487  Sum_probs=123.4

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhc---CCCceeeEEEEEEeC-----C
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKL---QHRNLVRILGCCIEQ-----G  577 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l---~H~nIv~l~g~~~~~-----~  577 (675)
                      +|++.+.||+|+||.||+|+.. +++.||+|.++....  .....+..|+.+++++   +||||+++++++...     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4788899999999999999875 588999999875322  2234566777777665   699999999998642     3


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      ..++||||+++ +|.+++... ....+++..+..++.|++.||.|||+++   |+||||||+|||+++++.+||+|||++
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKV-PPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence            57899999985 888887542 2335889999999999999999999987   999999999999999999999999999


Q ss_pred             eecCC
Q 005825          658 RMFGG  662 (675)
Q Consensus       658 ~~~~~  662 (675)
                      +.+..
T Consensus       156 ~~~~~  160 (288)
T cd07863         156 RIYSC  160 (288)
T ss_pred             ccccC
Confidence            87753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.86  E-value=5.5e-21  Score=196.55  Aligned_cols=148  Identities=30%  Similarity=0.488  Sum_probs=128.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-----ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-----GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEK  579 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~  579 (675)
                      .+|+..+.||+|+||.||++... +++.||+|++....     ....+.+.+|+.++++++||||+++++++.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            47888899999999999999864 58899999886432     12345688999999999999999999998753  567


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      +++|||+++++|.+++..   ...+++.....++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++.
T Consensus        82 ~l~~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~  155 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKA---YGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR  155 (266)
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence            899999999999999843   335788889999999999999999887   99999999999999999999999999986


Q ss_pred             cC
Q 005825          660 FG  661 (675)
Q Consensus       660 ~~  661 (675)
                      +.
T Consensus       156 ~~  157 (266)
T cd06651         156 LQ  157 (266)
T ss_pred             cc
Confidence            63

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.86  E-value=3e-21  Score=223.62  Aligned_cols=158  Identities=23%  Similarity=0.374  Sum_probs=131.1

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEK  579 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~  579 (675)
                      ...++|.+.++||+|+||+||+++.. .++.+|+|.+...  .......|..|+.++.+++|||||++++++.+.  ...
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            34578999999999999999999864 4778999988743  223456789999999999999999999998654  468


Q ss_pred             EEEEEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCC----CceEecCCCCCCEEEcCC--------
Q 005825          580 ILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSR----FRIIHRDLKASNVLLDRD--------  646 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~----~~iiHrDlkp~NILl~~~--------  646 (675)
                      +|||||+++++|..+|... .....+++...+.|+.||+.||+|||..+.    .+||||||||+||||+.+        
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~  169 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT  169 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence            9999999999999998542 123468999999999999999999998542    349999999999999642        


Q ss_pred             ---------CCeEEeeeccceecCC
Q 005825          647 ---------MNPKISDFGLARMFGG  662 (675)
Q Consensus       647 ---------~~~kl~DFGla~~~~~  662 (675)
                               ..+||+|||+++.+..
T Consensus       170 ~~~~n~ng~~iVKLsDFGlAr~l~~  194 (1021)
T PTZ00266        170 AQANNLNGRPIAKIGDFGLSKNIGI  194 (1021)
T ss_pred             ccccccCCCCceEEccCCccccccc
Confidence                     3589999999987743

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=8.2e-21  Score=200.48  Aligned_cols=150  Identities=26%  Similarity=0.331  Sum_probs=133.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCcc---CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQ---GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~---~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.+.||+|+||.||++...+ ++.+|+|.+......   ..+.+..|+.++++++||||+++++.+.+....++||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            468889999999999999998754 899999999754322   4567899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||+++++|.+++... ....+++.....++.|+++||+|||..+   ++|+||||+||+++.++.+||+|||++....
T Consensus        81 e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  154 (316)
T cd05574          81 DYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSD  154 (316)
T ss_pred             EecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence            999999999998532 2346889999999999999999999987   9999999999999999999999999998663

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.86  E-value=7.9e-21  Score=200.54  Aligned_cols=143  Identities=28%  Similarity=0.465  Sum_probs=118.6

Q ss_pred             eeeCCcCceeEEEEEEc---CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEe--CCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL---NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE--QGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~--~~~~~lV~Ey~~~  588 (675)
                      .+||+|+||.||+|+..   ++..||+|.++...  ....+.+|+.++++++||||+++++++..  +...++||||+++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            58999999999999864   35789999987532  33567889999999999999999999854  4578999999875


Q ss_pred             CCHHHHhcCC------CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE----cCCCCeEEeeeccce
Q 005825          589 KSLDVFLFDP------TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL----DRDMNPKISDFGLAR  658 (675)
Q Consensus       589 gsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DFGla~  658 (675)
                       +|.+++...      .....+++.....++.||+.||.|||+.+   |+||||||+|||+    ++++.+||+|||+|+
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07867          85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence             666665321      12335788899999999999999999987   9999999999999    567799999999999


Q ss_pred             ecCC
Q 005825          659 MFGG  662 (675)
Q Consensus       659 ~~~~  662 (675)
                      .+..
T Consensus       161 ~~~~  164 (317)
T cd07867         161 LFNS  164 (317)
T ss_pred             ccCC
Confidence            8754

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.86  E-value=5.1e-21  Score=198.39  Aligned_cols=151  Identities=28%  Similarity=0.418  Sum_probs=126.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHH-HHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLL-IAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~i-l~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|++.+.||+|+||.||+++.. +++.||+|+++... .....++..|+.+ ++.++||||+++++++...+..++|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            47889999999999999999875 58999999987542 2233455566665 566789999999999999999999999


Q ss_pred             ecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |++ ++|.+++... .....+++.....++.||+.||+|||++.  +++||||||+||++++++.+||+|||+++.+.
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            997 6888777432 23356899999999999999999999862  39999999999999999999999999998764

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=1e-21  Score=204.03  Aligned_cols=154  Identities=27%  Similarity=0.370  Sum_probs=134.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      +.+-|.+.+.||+|-|..|-+++. -.|+.||||++.+..  ......+.+|++.|+.++|||||+|+.+...+..+|||
T Consensus        16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi   95 (864)
T KOG4717|consen   16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI   95 (864)
T ss_pred             eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence            345677788999999999999974 579999999998643  33456788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE-cCCCCeEEeeeccceecC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL-DRDMNPKISDFGLARMFG  661 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl-~~~~~~kl~DFGla~~~~  661 (675)
                      +|+=.+|+|.+|+....  ..+.+....+++.||+.|+.|+|+.+   ++||||||+|+++ .+-|.+||+|||++..+.
T Consensus        96 LELGD~GDl~DyImKHe--~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~  170 (864)
T KOG4717|consen   96 LELGDGGDLFDYIMKHE--EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ  170 (864)
T ss_pred             EEecCCchHHHHHHhhh--ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCC
Confidence            99999999999996543  34788888999999999999999988   9999999999887 557899999999998886


Q ss_pred             CCc
Q 005825          662 GDE  664 (675)
Q Consensus       662 ~~~  664 (675)
                      +.+
T Consensus       171 PG~  173 (864)
T KOG4717|consen  171 PGK  173 (864)
T ss_pred             Ccc
Confidence            654

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.86  E-value=3.4e-21  Score=202.26  Aligned_cols=151  Identities=38%  Similarity=0.656  Sum_probs=127.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCc----EEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGE----EVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~----~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .++|+..+.||+|+||.||+|... +++    .||+|.+..... ....++.+|+.++++++||||+++++++... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~   84 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ   84 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence            356788899999999999999763 343    578998875432 2345788999999999999999999998754 567


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +++||+++|+|.+++...  ...+++..+..++.|++.||+|||+++   |+||||||+||++++++.+||+|||+++.+
T Consensus        85 ~v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~  159 (303)
T cd05110          85 LVTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (303)
T ss_pred             eeehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccc
Confidence            899999999999998532  335788899999999999999999987   999999999999999999999999999977


Q ss_pred             CCC
Q 005825          661 GGD  663 (675)
Q Consensus       661 ~~~  663 (675)
                      ...
T Consensus       160 ~~~  162 (303)
T cd05110         160 EGD  162 (303)
T ss_pred             cCc
Confidence            543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.86  E-value=6.8e-21  Score=200.73  Aligned_cols=150  Identities=28%  Similarity=0.457  Sum_probs=127.7

Q ss_pred             CcceeeeeCCcCceeEEEEEEc---CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL---NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEKI  580 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~~  580 (675)
                      .|++.++||+|+||.||+|+..   +++.||+|.+....   ....+.+.+|+.++.+++||||+++++++.+.  +..+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            4788899999999999999864   47899999998632   33456788899999999999999999999988  7899


Q ss_pred             EEEEecCCCCHHHHhcCCC--CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC----CCCeEEeee
Q 005825          581 LILEYMPNKSLDVFLFDPT--KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR----DMNPKISDF  654 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~----~~~~kl~DF  654 (675)
                      +||||+++ +|.+++....  ....++......++.||+.||.|||+.+   |+||||||+||+++.    ++.+||+||
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            99999975 5666553221  2236788899999999999999999987   999999999999999    999999999


Q ss_pred             ccceecCC
Q 005825          655 GLARMFGG  662 (675)
Q Consensus       655 Gla~~~~~  662 (675)
                      |+++.+..
T Consensus       157 g~~~~~~~  164 (316)
T cd07842         157 GLARLFNA  164 (316)
T ss_pred             ccccccCC
Confidence            99987643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.86  E-value=5.7e-21  Score=196.99  Aligned_cols=143  Identities=35%  Similarity=0.602  Sum_probs=123.2

Q ss_pred             eeeCCcCceeEEEEEEcC-Cc--EEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLLN-GE--EVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~-g~--~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.||+|+||.||+|+..+ +.  .+|+|.++... ....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            368999999999998754 43  57888887532 34456789999999999 799999999999999999999999999


Q ss_pred             CCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          589 KSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       589 gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      ++|.+++....             ....+++.++..++.|++.||+|||+.+   ++||||||+|||+++++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence            99999985421             1235789999999999999999999987   9999999999999999999999999


Q ss_pred             ccee
Q 005825          656 LARM  659 (675)
Q Consensus       656 la~~  659 (675)
                      +++.
T Consensus       158 l~~~  161 (270)
T cd05047         158 LSRG  161 (270)
T ss_pred             Cccc
Confidence            9863

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.86  E-value=3.2e-21  Score=198.17  Aligned_cols=148  Identities=31%  Similarity=0.508  Sum_probs=129.9

Q ss_pred             CcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc------cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG------QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      +|+..+.||+|+||.||+++. .+++.||+|.++....      ...+.+..|++++++++|+||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            477788999999999999975 5689999999874321      134678999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-CeEEeeeccceec
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLARMF  660 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DFGla~~~  660 (675)
                      ||||+++++|.+++..   ...+++.....++.|++.||+|||+++   ++|+||||+||+++.++ .+||+|||+++.+
T Consensus        81 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~  154 (268)
T cd06630          81 FVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL  154 (268)
T ss_pred             EEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence            9999999999999843   346788999999999999999999987   99999999999998776 5999999999877


Q ss_pred             CC
Q 005825          661 GG  662 (675)
Q Consensus       661 ~~  662 (675)
                      ..
T Consensus       155 ~~  156 (268)
T cd06630         155 AA  156 (268)
T ss_pred             cc
Confidence            54

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.86  E-value=7.2e-21  Score=197.50  Aligned_cols=149  Identities=32%  Similarity=0.506  Sum_probs=132.8

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|++.+.||+|+||.||+|+.. +++.||||++....  ....+.+.+|+.++++++||||+++++++..+...++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            4788899999999999999864 68999999987543  23356799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      + +++|.+++...  ...+++.++..++.||++||+|||+.+   ++|+||||+||++++++.+||+|||+++.+...
T Consensus        81 ~-~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~  152 (286)
T cd07832          81 M-PSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEE  152 (286)
T ss_pred             c-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence            9 99999998543  256899999999999999999999987   999999999999999999999999999887543

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.86  E-value=5.8e-21  Score=194.68  Aligned_cols=150  Identities=39%  Similarity=0.634  Sum_probs=131.3

Q ss_pred             cceeeeeCCcCceeEEEEEEcC-----CcEEEEEEecCcCcc-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          510 FSMECKLGEGGFGPVYKGRLLN-----GEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~~-----g~~vAvK~l~~~~~~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      |++.+.||+|+||.||+++..+     +..||+|.++..... ..+.+..|+.++.+++|+||+++++++.+.+..+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            3566899999999999998754     488999999764333 5678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++++|.+++..... ..+++..+..++.|++.||+|||+.+   ++|+||||+||++++++.+||+|||+++.....
T Consensus        81 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  156 (258)
T smart00219       81 EYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD  156 (258)
T ss_pred             eccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence            99999999999854221 12899999999999999999999987   999999999999999999999999999877543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.86  E-value=2.1e-21  Score=202.84  Aligned_cols=145  Identities=26%  Similarity=0.418  Sum_probs=128.7

Q ss_pred             ceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCC
Q 005825          511 SMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNK  589 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g  589 (675)
                      .....||+|+||.||++... ++..||||.+........+.+.+|+.++++++||||+++++.+..++..++||||++++
T Consensus        25 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~  104 (292)
T cd06658          25 DSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGG  104 (292)
T ss_pred             hhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCC
Confidence            33467999999999999864 58899999987655555677899999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          590 SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       590 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +|.+++..    ..+++.+...++.||+.||+|||+++   |+||||||+||++++++.+||+|||+++.+..
T Consensus       105 ~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~  170 (292)
T cd06658         105 ALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK  170 (292)
T ss_pred             cHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccc
Confidence            99998732    34788999999999999999999987   99999999999999999999999999986643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.86  E-value=5.4e-21  Score=195.11  Aligned_cols=146  Identities=34%  Similarity=0.573  Sum_probs=127.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      ++|++.+.||+|+||.||++.. .++.||+|.++..  ...+.+.+|+.++++++||||+++++++... ..++||||++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            4688889999999999999975 6788999998643  2346789999999999999999999998754 5799999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++|.+++.... ...+++..+..++.|++.||.|||+.+   ++||||||+||+++.++.+||+|||+++...
T Consensus        82 ~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~  151 (254)
T cd05083          82 KGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGS  151 (254)
T ss_pred             CCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecc
Confidence            999999986432 335788999999999999999999987   9999999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.86  E-value=3.6e-22  Score=196.33  Aligned_cols=153  Identities=28%  Similarity=0.454  Sum_probs=125.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc---C--CcEEEEEEecCcCcc-C-HHHHHHHHHHHHhcCCCceeeEEEEEEe-CCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL---N--GEEVAVKRLSSQSGQ-G-LEEFKNEMLLIAKLQHRNLVRILGCCIE-QGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~---~--g~~vAvK~l~~~~~~-~-~~~f~~E~~il~~l~H~nIv~l~g~~~~-~~~  578 (675)
                      ...|+...+||+|.||.||+|.-.   +  .+++|+|+++..... + .....+|+.+++.++||||+.|..++.. +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            356788889999999999999532   2  347999999864221 1 2345689999999999999999999877 678


Q ss_pred             EEEEEEecCCCCHHHHhc--CCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC----CCeEEe
Q 005825          579 KILILEYMPNKSLDVFLF--DPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD----MNPKIS  652 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~--~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~----~~~kl~  652 (675)
                      .+|++||.+. +|..+++  +..+.+.++......|+.||+.|+.|||++-   |+||||||.|||+..+    |.|||+
T Consensus       103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEee
Confidence            9999999976 5555553  2234467888889999999999999999997   9999999999999877    899999


Q ss_pred             eeccceecCCC
Q 005825          653 DFGLARMFGGD  663 (675)
Q Consensus       653 DFGla~~~~~~  663 (675)
                      |||+||++...
T Consensus       179 DlGlaR~~~~p  189 (438)
T KOG0666|consen  179 DLGLARLFNNP  189 (438)
T ss_pred             cccHHHHhhcc
Confidence            99999998543

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.85  E-value=6.5e-21  Score=194.35  Aligned_cols=149  Identities=29%  Similarity=0.482  Sum_probs=134.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .++|+..++||+|+||.||+++..+ ++.+++|.++....  .+++.+|++++++++||||+++++.+.+....++++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            3678888999999999999998765 78999999875432  67899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++..  ....+++.....++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||++..+..
T Consensus        80 ~~~~~L~~~l~~--~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~  151 (256)
T cd06612          80 CGAGSVSDIMKI--TNKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTD  151 (256)
T ss_pred             CCCCcHHHHHHh--CccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhccc
Confidence            999999999843  2356899999999999999999999987   99999999999999999999999999987744

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.85  E-value=8.3e-21  Score=195.75  Aligned_cols=150  Identities=31%  Similarity=0.539  Sum_probs=125.9

Q ss_pred             cceeeeeCCcCceeEEEEEEc----CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC------
Q 005825          510 FSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------  577 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~----~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~------  577 (675)
                      |.+.+.||+|+||.||+|.+.    .++.||||.++..  .....+++.+|+.++++++||||+++++++...+      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            556789999999999999753    3688999998754  2334567899999999999999999999986543      


Q ss_pred             eEEEEEEecCCCCHHHHhcCC---CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeee
Q 005825          578 EKILILEYMPNKSLDVFLFDP---TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDF  654 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DF  654 (675)
                      ..++++||+++|+|..++...   .....+++.....++.|++.||+|||+.+   |+||||||+||++++++.+||+||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence            247889999999999887432   12235788899999999999999999987   999999999999999999999999


Q ss_pred             ccceecCC
Q 005825          655 GLARMFGG  662 (675)
Q Consensus       655 Gla~~~~~  662 (675)
                      |+++.+..
T Consensus       158 g~~~~~~~  165 (273)
T cd05074         158 GLSKKIYS  165 (273)
T ss_pred             cccccccC
Confidence            99987643

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.85  E-value=3.1e-21  Score=197.27  Aligned_cols=149  Identities=27%  Similarity=0.354  Sum_probs=133.2

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      +|++.+.||+|+||.||+++.. +++.||+|.+....   ....+.+.+|+.++++++||||+++++.+.+++..++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            5888999999999999999875 58999999997532   2346789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |+++++|..++..   ...+++.+...++.++++||.|||+.+   ++|+||||+||++++++.+||+|||++......
T Consensus        81 ~~~~~~L~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  153 (258)
T cd05578          81 LLLGGDLRYHLSQ---KVKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPD  153 (258)
T ss_pred             CCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence            9999999999843   246888999999999999999999987   999999999999999999999999999876443

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.85  E-value=5.8e-21  Score=202.82  Aligned_cols=145  Identities=22%  Similarity=0.311  Sum_probs=125.3

Q ss_pred             eeeeeCCc--CceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          512 MECKLGEG--GFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       512 ~~~~IG~G--~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      +.++||+|  +|++||+++. .+++.||||+++...  ....+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45789999  7899999976 468999999997542  223456788999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++++|.+++.... ...+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+|++||+.+..+
T Consensus        82 ~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~  151 (327)
T cd08227          82 AYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSM  151 (327)
T ss_pred             CCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcc
Confidence            9999999985322 234789999999999999999999987   999999999999999999999999865443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.85  E-value=6.9e-22  Score=189.18  Aligned_cols=155  Identities=28%  Similarity=0.347  Sum_probs=137.1

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEE-EcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-----e
Q 005825          505 AATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-----E  578 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-----~  578 (675)
                      ...++|++.++||+|||.-||.++ ..+++.+|+|++.-...++.+..++|++.-++++||||++++++...+.     +
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            456799999999999999999997 5678999999998777778889999999999999999999998875433     5


Q ss_pred             EEEEEEecCCCCHHHHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          579 KILILEYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      .||+++|...|+|.+.+.... +...+++.+.+.|+.+|++||++||+.. ++.+||||||.|||+.+++.++|.|||-+
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~  176 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSA  176 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCc
Confidence            899999999999999886543 3447899999999999999999999985 47999999999999999999999999987


Q ss_pred             eec
Q 005825          658 RMF  660 (675)
Q Consensus       658 ~~~  660 (675)
                      ...
T Consensus       177 ~~a  179 (302)
T KOG2345|consen  177 TQA  179 (302)
T ss_pred             ccc
Confidence            654

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=8.5e-21  Score=194.05  Aligned_cols=142  Identities=37%  Similarity=0.573  Sum_probs=123.7

Q ss_pred             eeeCCcCceeEEEEEEcC----CcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      ++||+|+||.||+|+...    +..+|+|.++.... ...+++..|+.+++++.||||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            479999999999997532    26899999886433 24567999999999999999999999875 5578999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++|.+++..   ...+++..+..++.|++.||+|||..+   ++|+||||+|||++.++.+||+|||+++.+..
T Consensus        80 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~  147 (257)
T cd05060          80 GPLLKYLKK---RREIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGA  147 (257)
T ss_pred             CcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeec
Confidence            999999953   236889999999999999999999987   99999999999999999999999999987743

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.85  E-value=1.3e-21  Score=207.36  Aligned_cols=152  Identities=30%  Similarity=0.520  Sum_probs=131.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC---C--cEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN---G--EEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~---g--~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .+...+.++||+|-||.||+|.+.+   |  -.||||..+.+ .....+.|+.|..+|++++|||||+|+|+|.+ ...|
T Consensus       388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W  466 (974)
T KOG4257|consen  388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW  466 (974)
T ss_pred             hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence            3445566789999999999997532   3  35899998874 45667889999999999999999999999976 4689


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||||+.+-|.|..||...  ...++......++.||..||+|||+..   .+||||.++|||+...-.+||+||||+|-+
T Consensus       467 ivmEL~~~GELr~yLq~n--k~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~  541 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQN--KDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYL  541 (974)
T ss_pred             EEEecccchhHHHHHHhc--cccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhc
Confidence            999999999999999543  445888888999999999999999986   999999999999999999999999999988


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ..+.
T Consensus       542 ed~~  545 (974)
T KOG4257|consen  542 EDDA  545 (974)
T ss_pred             cccc
Confidence            6543

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=9.9e-21  Score=195.70  Aligned_cols=148  Identities=26%  Similarity=0.478  Sum_probs=131.6

Q ss_pred             CcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc-CccCHHHHHHHHHHHHhcC---CCceeeEEEEEEeCCeEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQ---HRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~---H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .|+..++||+|+||.||+|.. .+++.||+|.++.. .....+++.+|+.++++++   |||++++++++.++...++||
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            467778999999999999986 46899999998754 3345667899999999997   999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++++|.+++..    ..+++.....++.+++.||.|||+.+   |+|+||+|+||++++++.++|+|||++..+...
T Consensus        82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06917          82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN  154 (277)
T ss_pred             ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence            99999999998843    26889999999999999999999987   999999999999999999999999999887543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.2e-20  Score=193.86  Aligned_cols=148  Identities=31%  Similarity=0.494  Sum_probs=128.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc-----CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ-----SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEK  579 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~-----~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~  579 (675)
                      .+|++.+.||+|+||.||+++.. +++.||+|.+...     ..+..+.+.+|+.++++++|+||+++++++.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            57899999999999999999864 5899999987532     123446788999999999999999999998764  457


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++|+||+++++|.+++..   ...+++.....++.|++.||.|||+.+   ++|+||||+||+++.++.+||+|||+++.
T Consensus        82 ~~v~e~~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  155 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKA---YGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR  155 (264)
T ss_pred             EEEEEeCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence            899999999999999843   335788889999999999999999987   99999999999999999999999999987


Q ss_pred             cC
Q 005825          660 FG  661 (675)
Q Consensus       660 ~~  661 (675)
                      +.
T Consensus       156 ~~  157 (264)
T cd06653         156 IQ  157 (264)
T ss_pred             cc
Confidence            63

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.85  E-value=4.3e-21  Score=200.96  Aligned_cols=145  Identities=30%  Similarity=0.438  Sum_probs=128.7

Q ss_pred             ceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCC
Q 005825          511 SMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNK  589 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~g  589 (675)
                      ....+||+|+||.||+++.. +++.||+|.+........+.+.+|+.++..++||||+++++.+..++..++||||++++
T Consensus        24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~  103 (297)
T cd06659          24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG  103 (297)
T ss_pred             HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence            33457999999999999864 68999999987654555677889999999999999999999999999999999999999


Q ss_pred             CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          590 SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       590 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +|..++..    ..+++..+..++.|++.||+|||+.+   ++||||||+||++++++.+||+|||+++.+..
T Consensus       104 ~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~  169 (297)
T cd06659         104 ALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISK  169 (297)
T ss_pred             CHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccc
Confidence            99988732    35789999999999999999999987   99999999999999999999999999976643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.85  E-value=1.1e-20  Score=193.40  Aligned_cols=150  Identities=29%  Similarity=0.426  Sum_probs=135.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.+.||+|++|.||+++... ++.|+||++..... ...+.+..|+..+.+++|+||+++++++...+..++||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            468888999999999999998764 89999999876543 4467899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHh-cCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH-YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++..   ...+++..+..++.|+++||+|||+ .+   ++|+||+|+||+++.++.+||+|||+++.+...
T Consensus        81 ~~~~~L~~~l~~---~~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~  153 (264)
T cd06623          81 MDGGSLADLLKK---VGKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENT  153 (264)
T ss_pred             cCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence            999999999943   2568899999999999999999998 77   999999999999999999999999999987543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.85  E-value=9.6e-21  Score=197.92  Aligned_cols=149  Identities=28%  Similarity=0.442  Sum_probs=133.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .++|.+.+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.++++++||||+++++.+...+..++|+||
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            36888999999999999999975 46789999998754445567889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++..    ..+++.++..++.+++.||.|||+.+   ++|+||||+||++++++.+||+|||++..+..
T Consensus        98 ~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~  167 (293)
T cd06647          98 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (293)
T ss_pred             CCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccc
Confidence            999999999842    34788899999999999999999987   99999999999999999999999999886644

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.85  E-value=1.9e-20  Score=191.19  Aligned_cols=150  Identities=27%  Similarity=0.414  Sum_probs=130.0

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC-CeEEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ-GEKILILE  584 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~-~~~~lV~E  584 (675)
                      +|++.+.||+|++|.||++... +++.||+|++....  ....+.+.+|+.++++++|+|++++++.+... ...++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            4788999999999999999864 47899999987532  23456788999999999999999999987644 46789999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |+++++|.+++... ....+++.++..++.+++.||+|||+.+   |+|+||||+||++++++.+||+|||+++.+..
T Consensus        81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~  154 (257)
T cd08223          81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN  154 (257)
T ss_pred             ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecc
Confidence            99999999998642 2345899999999999999999999987   99999999999999999999999999987743

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.85  E-value=6.9e-21  Score=195.07  Aligned_cols=143  Identities=33%  Similarity=0.571  Sum_probs=121.4

Q ss_pred             eeeCCcCceeEEEEEEcC----CcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe-CCeEEEEEEecC
Q 005825          514 CKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE-QGEKILILEYMP  587 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~-~~~~~lV~Ey~~  587 (675)
                      +.||+|+||.||+|...+    ...||+|++... .....+.+..|+.+++.++||||+++++++.. .+..++||||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            368999999999998632    457999998643 23345788899999999999999999998764 456889999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++|.+++...  ...+.+...+.++.+++.||+|||+.+   ++||||||+|||+++++.+||+|||+++.+.
T Consensus        81 ~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~  149 (262)
T cd05058          81 HGDLRNFIRSE--THNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIY  149 (262)
T ss_pred             CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCcccccccc
Confidence            99999998542  234677888899999999999999987   9999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.85  E-value=3.4e-21  Score=199.35  Aligned_cols=148  Identities=31%  Similarity=0.455  Sum_probs=130.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +.|+..+.||+|+||.||+|... +++.||+|.++... ....+.+.+|+.++++++||||+++++.+...+..++||||
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            34666788999999999999764 57899999987432 33456789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++.    ...+++.....++.++++||.|||+++   ++|+||+|+||++++++.+||+|||+++.+..
T Consensus        84 ~~~~~L~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06642          84 LGGGSALDLLK----PGPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             cCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccC
Confidence            99999999883    245788999999999999999999987   99999999999999999999999999987643

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.85  E-value=8.6e-22  Score=223.38  Aligned_cols=151  Identities=33%  Similarity=0.481  Sum_probs=125.2

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe------
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE------  575 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~------  575 (675)
                      .+..++|+..+.||+||||.||+++. -||+.+|||+|... +......+.+|+.++++|+|||||+++..+.+      
T Consensus       475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            45567899999999999999999985 48999999999754 33445678899999999999999998876643      


Q ss_pred             --------------------------------------------------------------------------------
Q 005825          576 --------------------------------------------------------------------------------  575 (675)
Q Consensus       576 --------------------------------------------------------------------------------  575 (675)
                                                                                                      
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -------------------------C--------CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHH
Q 005825          576 -------------------------Q--------GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY  622 (675)
Q Consensus       576 -------------------------~--------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~y  622 (675)
                                               .        ..+||=||||+...+.+++.+.....  .-...++++++|+.||+|
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY  712 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY  712 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence                                     0        12467799999888888885432211  345667899999999999


Q ss_pred             HHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       623 LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      +|+++   ||||||||.||+||++..|||+|||+|..
T Consensus       713 IH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  713 IHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             HHhCc---eeeccCCcceeEEcCCCCeeecccccchh
Confidence            99998   99999999999999999999999999987

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.85  E-value=8.8e-21  Score=197.04  Aligned_cols=150  Identities=28%  Similarity=0.419  Sum_probs=131.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|++.++||+|+||.||+|... +++.||||+++..  .....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            46889999999999999999875 5889999998753  23345789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |++++.+..+..   +...+++.+...++.+|+.||.|||+.+   ++|+||+|+||++++++.+||+|||+++.+...
T Consensus        81 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~  153 (288)
T cd07833          81 YVERTLLELLEA---SPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRAR  153 (288)
T ss_pred             cCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence            999988776663   2344789999999999999999999987   999999999999999999999999999887544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.85  E-value=1.4e-20  Score=194.77  Aligned_cols=148  Identities=30%  Similarity=0.446  Sum_probs=130.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +-|+..++||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   83 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY   83 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence            3467778999999999999976 468899999886432 23456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++..    ..+++.....++.+++.||.|||+.+   ++|+||||+||+++.++.++|+|||+++.+..
T Consensus        84 ~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06641          84 LGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceeccc
Confidence            999999998832    35789999999999999999999987   99999999999999999999999999987643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.85  E-value=2.1e-21  Score=198.77  Aligned_cols=144  Identities=29%  Similarity=0.431  Sum_probs=124.0

Q ss_pred             eeeCCcCceeEEEEEEcC--------CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          514 CKLGEGGFGPVYKGRLLN--------GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +.||+|+||.||+|....        ..+||+|.+........+++.+|+.+++.++||||+++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            469999999999997532        335888888765445567889999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC--------eEEeeeccc
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN--------PKISDFGLA  657 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~--------~kl~DFGla  657 (675)
                      +++|+|..++...  ...+++..++.++.||+.||+|||+++   |+||||||+||+++.++.        +|++|||++
T Consensus        81 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~  155 (258)
T cd05078          81 VKFGSLDTYLKKN--KNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS  155 (258)
T ss_pred             CCCCcHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccc
Confidence            9999999999543  235789999999999999999999987   999999999999987765        699999998


Q ss_pred             eecCC
Q 005825          658 RMFGG  662 (675)
Q Consensus       658 ~~~~~  662 (675)
                      .....
T Consensus       156 ~~~~~  160 (258)
T cd05078         156 ITVLP  160 (258)
T ss_pred             cccCC
Confidence            76543

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.85  E-value=1.6e-20  Score=191.64  Aligned_cols=150  Identities=25%  Similarity=0.425  Sum_probs=131.9

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|++.++||+|+||.||+++.. +++.||+|++...  .....+++.+|+.++++++||||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            4788999999999999999764 5889999998643  233456789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++... ....+++.+.+.++.|++.||+|||+++   ++|+||+|+||+++.++.+||+|||++..+..
T Consensus        81 ~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~  153 (256)
T cd08218          81 CEGGDLYKKINAQ-RGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS  153 (256)
T ss_pred             CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence            9999999988532 2235788999999999999999999987   99999999999999999999999999987644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.85  E-value=6.6e-22  Score=195.05  Aligned_cols=141  Identities=28%  Similarity=0.398  Sum_probs=127.3

Q ss_pred             eeeCCcCceeEEEEE-EcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEEEecCCCCH
Q 005825          514 CKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILILEYMPNKSL  591 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL  591 (675)
                      +.||+|+++.|--+. +.++.++|||++.+.......++.+|++++...+ |+||+.|+.+|++....|||||-|.||+|
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl  163 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL  163 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence            679999999999885 5689999999999876667788999999999996 99999999999999999999999999999


Q ss_pred             HHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC---eEEeeeccceec
Q 005825          592 DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN---PKISDFGLARMF  660 (675)
Q Consensus       592 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DFGla~~~  660 (675)
                      ..++.   ++..+.+.++..+..+|+.||.|||.++   |.||||||+|||..+...   +||+||.|+.-+
T Consensus       164 LshI~---~~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~  229 (463)
T KOG0607|consen  164 LSHIQ---KRKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGI  229 (463)
T ss_pred             HHHHH---HhhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecccccccc
Confidence            99984   4566889999999999999999999998   999999999999976544   799999998654

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.85  E-value=1.3e-20  Score=196.57  Aligned_cols=150  Identities=29%  Similarity=0.419  Sum_probs=127.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCe-----
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGE-----  578 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~-----  578 (675)
                      ++|++.+.||+|+||.||+|+.. +++.||||.++...  ......+.+|+.+++++. ||||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46889999999999999999875 58999999886532  223467888999999995 6999999999987665     


Q ss_pred             EEEEEEecCCCCHHHHhcCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-CCCeEEeeec
Q 005825          579 KILILEYMPNKSLDVFLFDPTK--KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-DMNPKISDFG  655 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DFG  655 (675)
                      .++||||+++ +|.+++.....  ...+++.....++.||++||.|||+++   |+||||||+||+++. ++.+||+|||
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence            8999999986 78888754322  346899999999999999999999987   999999999999998 8899999999


Q ss_pred             cceecC
Q 005825          656 LARMFG  661 (675)
Q Consensus       656 la~~~~  661 (675)
                      +++.+.
T Consensus       157 ~~~~~~  162 (295)
T cd07837         157 LGRAFS  162 (295)
T ss_pred             cceecC
Confidence            998653

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.85  E-value=3.4e-21  Score=187.56  Aligned_cols=142  Identities=19%  Similarity=0.185  Sum_probs=109.3

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCcCcc--C-------HHHH-----------------HHHHHHHHhcCCCce
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ--G-------LEEF-----------------KNEMLLIAKLQHRNL  566 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~--~-------~~~f-----------------~~E~~il~~l~H~nI  566 (675)
                      ...||+|+||.||+|...+|+.||||+++.....  .       ...|                 ..|+.++.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            3679999999999999888999999999753211  1       1122                 349999999987776


Q ss_pred             eeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHH-HhcCCCceEecCCCCCCEEEcC
Q 005825          567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL-HHYSRFRIIHRDLKASNVLLDR  645 (675)
Q Consensus       567 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~iiHrDlkp~NILl~~  645 (675)
                      .....+..  ...+|||||++++++.....   ....++..+...++.|++.+|.|| |+.+   |+||||||+|||++ 
T Consensus        82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~---~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-  152 (190)
T cd05147          82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL---KDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-  152 (190)
T ss_pred             CCCcEEEe--cCCEEEEEEeCCCCCcchhh---hcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-
Confidence            44332222  23489999999987765432   234578888999999999999999 5666   99999999999998 


Q ss_pred             CCCeEEeeeccceecCCC
Q 005825          646 DMNPKISDFGLARMFGGD  663 (675)
Q Consensus       646 ~~~~kl~DFGla~~~~~~  663 (675)
                      ++.++|+|||+|...+.+
T Consensus       153 ~~~v~LiDFG~a~~~~~~  170 (190)
T cd05147         153 DGKLYIIDVSQSVEHDHP  170 (190)
T ss_pred             CCcEEEEEccccccCCCc
Confidence            478999999999876443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.85  E-value=1.3e-20  Score=195.10  Aligned_cols=148  Identities=28%  Similarity=0.434  Sum_probs=131.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ..|+..++||+|+||.||+|... +++.||+|.++... ......+.+|+.+++++.||||+++++++.+....++||||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            45677789999999999999864 58899999987532 34456799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++..    ..+++.+...++.+++.||+|||+.+   ++|+||+|+||++++++.++|+|||+++.+..
T Consensus        84 ~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06640          84 LGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence            999999998842    35788888999999999999999887   99999999999999999999999999987754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=2.5e-21  Score=207.09  Aligned_cols=154  Identities=33%  Similarity=0.512  Sum_probs=132.4

Q ss_pred             eeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCHHH
Q 005825          515 KLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDV  593 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~  593 (675)
                      +||+|.||+||-|++.+ ...+|||.+..+.....+-+++|+.+-++++|.|||+++|.+.+++..-|.||-+|||||.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            69999999999999755 66899999988777778889999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCcccC--CHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc-CCCCeEEeeeccceecCCCcccCCCC
Q 005825          594 FLFDPTKKRLL--GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD-RDMNPKISDFGLARMFGGDELQGNTK  670 (675)
Q Consensus       594 ~l~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DFGla~~~~~~~~~~~~~  670 (675)
                      +|..  +-+++  .+.+.-.+..||++||.|||++.   |+|||||-+|+|++ -.|.+||+|||-++.+.+-.  ..|.
T Consensus       662 LLrs--kWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin--P~TE  734 (1226)
T KOG4279|consen  662 LLRS--KWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN--PCTE  734 (1226)
T ss_pred             HHHh--ccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCC--cccc
Confidence            9953  34455  66777788999999999999998   99999999999995 57899999999999885432  2344


Q ss_pred             ceecC
Q 005825          671 RIVGT  675 (675)
Q Consensus       671 ~~~GT  675 (675)
                      ++-||
T Consensus       735 TFTGT  739 (1226)
T KOG4279|consen  735 TFTGT  739 (1226)
T ss_pred             ccccc
Confidence            44454

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.3e-20  Score=194.60  Aligned_cols=149  Identities=27%  Similarity=0.419  Sum_probs=133.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.+.||.|+||.||+|+.. +++.||+|.+.... ......+.+|+.++++++|+||+++++++.+....++|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            36788889999999999999865 58899999987543 34456789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++..    ..+++.....++.|++.||.|||+.+   ++|+||+|+||++++++.++|+|||+++.+...
T Consensus        81 ~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~  151 (274)
T cd06609          81 CGGGSCLDLLKP----GKLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTST  151 (274)
T ss_pred             eCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence            999999999843    26889999999999999999999987   999999999999999999999999999887543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.85  E-value=1e-20  Score=196.33  Aligned_cols=148  Identities=32%  Similarity=0.512  Sum_probs=129.8

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|+..+.||+|++|.||+|+.. +++.||||+++...  ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            4788899999999999999874 58899999987532  22345788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++ ++|..++... ....+++.....++.|++.||+|||+.+   ++|+||+|+||++++++.+||+|||+++.+.
T Consensus        81 ~~-~~l~~~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~  151 (284)
T cd07860          81 LH-QDLKKFMDAS-PLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFG  151 (284)
T ss_pred             cc-cCHHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcc
Confidence            96 6888888543 2346889999999999999999999987   9999999999999999999999999998664

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.85  E-value=9.6e-22  Score=210.82  Aligned_cols=153  Identities=35%  Similarity=0.493  Sum_probs=133.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc--CCc--EEEEEEecCcCcc-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL--NGE--EVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~--~g~--~vAvK~l~~~~~~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ++..+.++||+|+||.|++|.+.  .|+  .||||.++..... ....|++|+.+|.+|+|||+++|+|+..+ ...+||
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV  188 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV  188 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence            34456689999999999999874  344  6899999875443 67899999999999999999999999887 678899


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +|+.+.|||.+.|++ .....+-......++.|||.||.||..++   +|||||.++|+||.....|||+||||.|-++.
T Consensus       189 ~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~  264 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGE  264 (1039)
T ss_pred             hhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCC
Confidence            999999999999976 34455667778889999999999999987   99999999999999999999999999999977


Q ss_pred             Ccc
Q 005825          663 DEL  665 (675)
Q Consensus       663 ~~~  665 (675)
                      ++.
T Consensus       265 ned  267 (1039)
T KOG0199|consen  265 NED  267 (1039)
T ss_pred             CCc
Confidence            664

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2.4e-20  Score=189.59  Aligned_cols=149  Identities=34%  Similarity=0.509  Sum_probs=133.5

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|++.+.||+|++|.||+++.. +++.||+|.+.....  ...+.+.+|++++++++|||++++++++..++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            4778899999999999999865 578999999986543  3557899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++..   ...+++..+..++.|++.||.|||+.+   |+||||||+||+++.++.+||+|||+++.....
T Consensus        81 ~~~~~L~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  152 (254)
T cd06627          81 AENGSLRQIIKK---FGPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDV  152 (254)
T ss_pred             CCCCcHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence            999999999843   356899999999999999999999987   999999999999999999999999999987543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=2e-22  Score=213.24  Aligned_cols=151  Identities=26%  Similarity=0.444  Sum_probs=134.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .+.+.++..||.|+||+||++..++ +...|.|.|...+...++.|+.|++||+..+||+||+|++.|...+.+++..||
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF  110 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF  110 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence            3456677889999999999998655 455678888877888889999999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |.||-.+.++..  -.+.|.+.++..++.+++.||.|||++.   |||||||+.|||++-+|.++|+|||.+.....
T Consensus       111 C~GGAVDaimlE--L~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~  182 (1187)
T KOG0579|consen  111 CGGGAVDAIMLE--LGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS  182 (1187)
T ss_pred             cCCchHhHHHHH--hccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh
Confidence            999999998854  3456889999999999999999999987   99999999999999999999999998876543

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.85  E-value=6.7e-21  Score=197.72  Aligned_cols=147  Identities=29%  Similarity=0.484  Sum_probs=128.3

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|++.++||+|+||.||+|+.. +|+.+|+|+++...  ......+..|+.++++++||||+++++++.+.+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            4788899999999999999874 58999999987532  22345678899999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++ ++|.+++...  ...+++.....++.||++||.|||+.+   |+||||||+||+++.++.+||+|||+++.+.
T Consensus        81 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  150 (284)
T cd07839          81 CD-QDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFG  150 (284)
T ss_pred             CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccC
Confidence            97 4777776432  345899999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=9.6e-21  Score=212.33  Aligned_cols=154  Identities=23%  Similarity=0.373  Sum_probs=119.8

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC--CcEEEEEEe--------------cC---cCccCHHHHHHHHHHHHhcCCCce
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN--GEEVAVKRL--------------SS---QSGQGLEEFKNEMLLIAKLQHRNL  566 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~--g~~vAvK~l--------------~~---~~~~~~~~f~~E~~il~~l~H~nI  566 (675)
                      ..++|++.++||+|+||+||++....  +...++|.+              .+   ........+.+|+.++++++||||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            45789999999999999999986532  222222211              10   112234568899999999999999


Q ss_pred             eeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc
Q 005825          567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTK--KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD  644 (675)
Q Consensus       567 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~  644 (675)
                      +++++++...+..++|+|++. ++|..++.....  ...........|+.||+.||+|||+++   ||||||||+|||++
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~  301 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLN  301 (501)
T ss_pred             CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC
Confidence            999999999999999999985 566666643211  112234566789999999999999987   99999999999999


Q ss_pred             CCCCeEEeeeccceecCCC
Q 005825          645 RDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       645 ~~~~~kl~DFGla~~~~~~  663 (675)
                      .++.+||+|||+|+.+...
T Consensus       302 ~~~~vkL~DFGla~~~~~~  320 (501)
T PHA03210        302 CDGKIVLGDFGTAMPFEKE  320 (501)
T ss_pred             CCCCEEEEeCCCceecCcc
Confidence            9999999999999987543

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.84  E-value=1.5e-20  Score=196.27  Aligned_cols=150  Identities=30%  Similarity=0.441  Sum_probs=129.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~~lV  582 (675)
                      ++|+..+.||+|+||.||+|... +++.+|+|.++...  ......+.+|+.++++++||||+++++++...  +..++|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            47888899999999999999875 58899999997432  22234577899999999999999999999877  889999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++ +|.+++...  ...+++.....++.||+.||+|||+.+   ++|+||||+||++++++.+||+|||+++.+..
T Consensus        85 ~e~~~~-~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          85 MEYVEH-DLKSLMETM--KQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             ehhcCc-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            999974 898887532  235899999999999999999999987   99999999999999999999999999987754


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       159 ~  159 (293)
T cd07843         159 P  159 (293)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>PTZ00284 protein kinase; Provisional

Probab=99.84  E-value=2e-20  Score=208.50  Aligned_cols=150  Identities=23%  Similarity=0.304  Sum_probs=121.9

Q ss_pred             HHHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCC------CceeeEEEEEEe
Q 005825          503 VAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH------RNLVRILGCCIE  575 (675)
Q Consensus       503 ~~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H------~nIv~l~g~~~~  575 (675)
                      +....++|++.++||+|+||+||+|+.. .++.||||+++.. ....+++..|+.++.+++|      .+++++++++..
T Consensus       124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~  202 (467)
T PTZ00284        124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN  202 (467)
T ss_pred             cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence            3445789999999999999999999864 5788999999743 2234556778887777755      458899998876


Q ss_pred             C-CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCCCCCEEEcCCC------
Q 005825          576 Q-GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-SRFRIIHRDLKASNVLLDRDM------  647 (675)
Q Consensus       576 ~-~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlkp~NILl~~~~------  647 (675)
                      . .+.++|||++ +++|.+++..   ...+++..+..|+.||+.||+|||++ +   ||||||||+|||++.++      
T Consensus       203 ~~~~~~iv~~~~-g~~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~  275 (467)
T PTZ00284        203 ETGHMCIVMPKY-GPCLLDWIMK---HGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPV  275 (467)
T ss_pred             CCceEEEEEecc-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccccc
Confidence            5 4788999987 7788888743   34688999999999999999999974 5   99999999999998765      


Q ss_pred             ----------CeEEeeeccceec
Q 005825          648 ----------NPKISDFGLARMF  660 (675)
Q Consensus       648 ----------~~kl~DFGla~~~  660 (675)
                                .+||+|||++...
T Consensus       276 ~~~~~~~~~~~vkl~DfG~~~~~  298 (467)
T PTZ00284        276 TNRALPPDPCRVRICDLGGCCDE  298 (467)
T ss_pred             cccccCCCCceEEECCCCccccC
Confidence                      4999999988653

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.84  E-value=4.6e-20  Score=186.86  Aligned_cols=150  Identities=35%  Similarity=0.560  Sum_probs=135.1

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      +|+..+.||+|++|.||++... +++.+++|++........+.+.+|+.++++++|+||+++++.+......++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            4777899999999999999875 688999999986554566789999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++|.+++...  ...+++..+..++.+++.||+|||..+   ++|+||+|+||++++++.+||+|||++......
T Consensus        81 ~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122          81 GGSLKDLLKST--NQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             CCcHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence            99999998542  246899999999999999999999977   999999999999999999999999999887554

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.84  E-value=1.2e-20  Score=208.28  Aligned_cols=153  Identities=25%  Similarity=0.394  Sum_probs=121.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-----------------cCCcEEEEEEecCcCccCHHH--------------HHHH
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-----------------LNGEEVAVKRLSSQSGQGLEE--------------FKNE  554 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-----------------~~g~~vAvK~l~~~~~~~~~~--------------f~~E  554 (675)
                      ..++|++.++||+|+||.||+|..                 ..++.||||+++.......++              +..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            357899999999999999999964                 235689999987543222223              3457


Q ss_pred             HHHHHhcCCCce-----eeEEEEEEe--------CCeEEEEEEecCCCCHHHHhcCCC---------------------C
Q 005825          555 MLLIAKLQHRNL-----VRILGCCIE--------QGEKILILEYMPNKSLDVFLFDPT---------------------K  600 (675)
Q Consensus       555 ~~il~~l~H~nI-----v~l~g~~~~--------~~~~~lV~Ey~~~gsL~~~l~~~~---------------------~  600 (675)
                      +.++.+++|.++     ++++++|..        ++..+|||||+++++|.++++...                     .
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777788877655     677888753        356899999999999999986321                     1


Q ss_pred             cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          601 KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       601 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ...+++..+..++.|++.||.|||+.+   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~  360 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMC  360 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccc
Confidence            123467788899999999999999987   9999999999999999999999999997653

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.84  E-value=2e-20  Score=194.07  Aligned_cols=156  Identities=29%  Similarity=0.456  Sum_probs=132.2

Q ss_pred             HHHHHhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEe---
Q 005825          501 ASVAAATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIE---  575 (675)
Q Consensus       501 ~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~---  575 (675)
                      .++..+.+.|++.+.||+|+||.||+|+. .+++.+|+|.+... .....++..|+.++.++ +||||+++++++..   
T Consensus         9 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~   87 (282)
T cd06636           9 SALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSP   87 (282)
T ss_pred             hhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccc
Confidence            34445668899999999999999999987 45889999998653 23446788999999998 69999999999863   


Q ss_pred             ---CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEe
Q 005825          576 ---QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       576 ---~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                         ....+++|||+++++|.+++... ....+++..+..++.||+.||+|||+.+   |+|+||||+||++++++.+||+
T Consensus        88 ~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l~  163 (282)
T cd06636          88 PGHDDQLWLVMEFCGAGSVTDLVKNT-KGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKLV  163 (282)
T ss_pred             cCCCCEEEEEEEeCCCCcHHHHHHHc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEe
Confidence               45789999999999999988542 2345778888899999999999999987   9999999999999999999999


Q ss_pred             eeccceecC
Q 005825          653 DFGLARMFG  661 (675)
Q Consensus       653 DFGla~~~~  661 (675)
                      |||+++.+.
T Consensus       164 dfg~~~~~~  172 (282)
T cd06636         164 DFGVSAQLD  172 (282)
T ss_pred             eCcchhhhh
Confidence            999987653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.84  E-value=3.7e-20  Score=188.30  Aligned_cols=150  Identities=34%  Similarity=0.499  Sum_probs=134.2

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEKILIL  583 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~~lV~  583 (675)
                      +|+..+.||+|++|.||+|... +++.|++|.+.....  ...+.+.+|+.++++++||||+++++.+.+.  ...++|+
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            4777899999999999999876 689999999875432  4567899999999999999999999999988  8899999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++++|.+++..   ...+++..+..++.++++||+|||+.+   ++|+||+|+||++++++.+||+|||.+......
T Consensus        81 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          81 EYVSGGSLSSLLKK---FGKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             EecCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            99999999999853   237899999999999999999999987   999999999999999999999999999887554


Q ss_pred             c
Q 005825          664 E  664 (675)
Q Consensus       664 ~  664 (675)
                      .
T Consensus       155 ~  155 (260)
T cd06606         155 E  155 (260)
T ss_pred             c
Confidence            3

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=1.7e-20  Score=193.10  Aligned_cols=153  Identities=30%  Similarity=0.467  Sum_probs=132.8

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC-----
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQG-----  577 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~-----  577 (675)
                      ..+++|++.+.||+|+||.||+|+.. +++.+++|.+.... ...+.+..|+.+++++ +|+||+++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            35689999999999999999999875 57899999987533 3456799999999999 6999999999997654     


Q ss_pred             -eEEEEEEecCCCCHHHHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          578 -EKILILEYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       578 -~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                       ..++||||+++++|.+++.... ....+++..+..++.|++.||+|||+.+   ++|+||+|+||++++++.+||+|||
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~  158 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG  158 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence             4899999999999999885422 2356889999999999999999999987   9999999999999999999999999


Q ss_pred             cceecC
Q 005825          656 LARMFG  661 (675)
Q Consensus       656 la~~~~  661 (675)
                      ++....
T Consensus       159 ~~~~~~  164 (275)
T cd06608         159 VSAQLD  164 (275)
T ss_pred             cceecc
Confidence            997653

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.84  E-value=2.2e-20  Score=182.23  Aligned_cols=143  Identities=20%  Similarity=0.235  Sum_probs=112.7

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCcCcc--C------------------------HHHHHHHHHHHHhcCCCce
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ--G------------------------LEEFKNEMLLIAKLQHRNL  566 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~--~------------------------~~~f~~E~~il~~l~H~nI  566 (675)
                      ...||+|+||.||+|+..+|+.||||+++.....  .                        ...+..|...+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999878999999998754211  0                        1124578999999999987


Q ss_pred             eeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHh-cCCCceEecCCCCCCEEEcC
Q 005825          567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH-YSRFRIIHRDLKASNVLLDR  645 (675)
Q Consensus       567 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlkp~NILl~~  645 (675)
                      .....+...  ..+|||||++++++.....   ....++..+...++.+++.+|.+||+ .+   |+||||||+|||++ 
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l---~~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-  152 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL---KDVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-  152 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhh---hhccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-
Confidence            544443332  3489999999986544321   12346778888999999999999999 77   99999999999999 


Q ss_pred             CCCeEEeeeccceecCCCc
Q 005825          646 DMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       646 ~~~~kl~DFGla~~~~~~~  664 (675)
                      ++.++|+|||+|+.+.++.
T Consensus       153 ~~~~~liDFG~a~~~~~~~  171 (190)
T cd05145         153 DGKPYIIDVSQAVELDHPN  171 (190)
T ss_pred             CCCEEEEEcccceecCCCC
Confidence            8899999999999887653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.84  E-value=3e-20  Score=193.46  Aligned_cols=151  Identities=29%  Similarity=0.413  Sum_probs=130.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~~lV~  583 (675)
                      ++|+..++||.|++|.||++... +++.+|+|.+.... .....++.+|++++++++||||+++++++.+.  +..++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            46888899999999999999874 58899999987532 23456799999999999999999999998654  3689999


Q ss_pred             EecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||+++++|.+++... .....+++.....++.|++.||+|||+.+   ++|+||+|+||++++++.+||+|||++..+.
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  156 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELV  156 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeecccccccc
Confidence            999999999887432 23445788899999999999999999987   9999999999999999999999999987653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.84  E-value=2.8e-20  Score=193.04  Aligned_cols=141  Identities=29%  Similarity=0.355  Sum_probs=118.3

Q ss_pred             eeCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHHHHH---hcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          515 KLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEMLLIA---KLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~il~---~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      .||+|+||.||+++.. +++.+|+|.+.+...   .....+.+|..++.   ..+||||+.+++++...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            4899999999999874 588999998865321   12233445544333   3479999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++|.+++..   ...+++.....++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.
T Consensus        81 ~~~L~~~i~~---~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~  148 (279)
T cd05633          81 GGDLHYHLSQ---HGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (279)
T ss_pred             CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceecc
Confidence            9999998843   346899999999999999999999987   9999999999999999999999999998664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.84  E-value=3.2e-20  Score=189.22  Aligned_cols=151  Identities=26%  Similarity=0.425  Sum_probs=131.1

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|+..+.||+|+||.||++... +++.+|||.+...  .....+.+.+|+.++++++||||+++++.+...+..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            5788899999999999999764 5889999998653  233456899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC-CCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++... ....+++..+..++.++++||+|||+++   ++|+||||+||+++++ ..+||+|||+++.+...
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (256)
T cd08220          81 APGGTLAEYIQKR-CNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK  155 (256)
T ss_pred             CCCCCHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence            9999999999542 2345789999999999999999999987   9999999999999865 46899999999877543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.84  E-value=1.2e-20  Score=194.15  Aligned_cols=145  Identities=37%  Similarity=0.557  Sum_probs=124.9

Q ss_pred             eeeCCcCceeEEEEEEcC-------CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          514 CKLGEGGFGPVYKGRLLN-------GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~-------g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +.||+|+||.||+|+..+       ++.+|||.+.... .....++.+|+.++++++||||+++++++...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999997642       3579999886533 23466899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCC----CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-----CeEEeeecc
Q 005825          586 MPNKSLDVFLFDPT----KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-----NPKISDFGL  656 (675)
Q Consensus       586 ~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-----~~kl~DFGl  656 (675)
                      +++++|.+++....    ....+++.+++.++.|++.||+|||+.+   ++|+||||+||+++.+.     .+||+|||+
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence            99999999986421    2235788999999999999999999887   99999999999999877     899999999


Q ss_pred             ceecC
Q 005825          657 ARMFG  661 (675)
Q Consensus       657 a~~~~  661 (675)
                      ++.+.
T Consensus       158 ~~~~~  162 (269)
T cd05044         158 ARDIY  162 (269)
T ss_pred             ccccc
Confidence            98653

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.84  E-value=2.3e-20  Score=192.14  Aligned_cols=153  Identities=28%  Similarity=0.465  Sum_probs=128.3

Q ss_pred             CcceeeeeCCcCceeEEEEEEcC--CcEEEEEEecCc----------CccCHHHHHHHHHHHHh-cCCCceeeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLLN--GEEVAVKRLSSQ----------SGQGLEEFKNEMLLIAK-LQHRNLVRILGCCIE  575 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~~--g~~vAvK~l~~~----------~~~~~~~f~~E~~il~~-l~H~nIv~l~g~~~~  575 (675)
                      +|++.+.||+|+||.||++....  ++.+|+|.+...          ......++..|+.++.+ ++||||+++++++.+
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            47778899999999999998754  688999987532          12234567788888865 799999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeee
Q 005825          576 QGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDF  654 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DF  654 (675)
                      .+..++||||+++++|.+++... .....+++..++.++.|++.||.|||+..  +++|+||||+||++++++.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df  158 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF  158 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence            99999999999999999887432 22346888999999999999999999632  3999999999999999999999999


Q ss_pred             ccceecCCC
Q 005825          655 GLARMFGGD  663 (675)
Q Consensus       655 Gla~~~~~~  663 (675)
                      |++......
T Consensus       159 g~~~~~~~~  167 (269)
T cd08528         159 GLAKQKQPE  167 (269)
T ss_pred             cceeecccc
Confidence            999876544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.84  E-value=3.3e-20  Score=195.12  Aligned_cols=149  Identities=32%  Similarity=0.492  Sum_probs=128.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ...|+..++||+|+||.||+|+.. +++.||+|.+.....   ...+++.+|+.++++++||||+++.+++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv   93 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV   93 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence            356888899999999999999864 589999999864322   2345788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |||++ |++.+++..  ....+++..+..++.|++.||.|||+.+   |+||||+|+||++++++.+||+|||+++...
T Consensus        94 ~e~~~-g~l~~~~~~--~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607          94 MEYCL-GSASDILEV--HKKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVS  166 (307)
T ss_pred             HHhhC-CCHHHHHHH--cccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecC
Confidence            99997 566666532  2345899999999999999999999987   9999999999999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.84  E-value=2.2e-20  Score=193.34  Aligned_cols=142  Identities=30%  Similarity=0.397  Sum_probs=124.7

Q ss_pred             eCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCH
Q 005825          516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL  591 (675)
Q Consensus       516 IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL  591 (675)
                      ||+|+||+||++... +++.+|+|.+....   ....+.+..|++++++++||||+++++.+...+..++||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            689999999999764 58899999986432   23345678899999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          592 DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       592 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      .+++.... ...+++.++..++.|++.||.|||+.+   ++||||||+||++++++.+||+|||+++.+.
T Consensus        81 ~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~  146 (277)
T cd05577          81 KYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELK  146 (277)
T ss_pred             HHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhc
Confidence            99985432 235889999999999999999999987   9999999999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=2.3e-21  Score=198.15  Aligned_cols=154  Identities=29%  Similarity=0.420  Sum_probs=129.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc-------CccCHHHHHHHHHHHHhcCCCceeeEEEEEE-eCCe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ-------SGQGLEEFKNEMLLIAKLQHRNLVRILGCCI-EQGE  578 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~-------~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~-~~~~  578 (675)
                      ++|-++++||+|+|+.||++.+ ...+.||||+-...       .....+...+|.+|-+.|+||-||++++++. +.+.
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds  542 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS  542 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence            5677788999999999999964 45788999975421       1122345667899999999999999999996 4556


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEeeec
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFG  655 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DFG  655 (675)
                      .+-|+||++|.+|+-||   ...+.++++++..|+.||+.||.||.+. .+||||-||||.||||-.   -|.+||+|||
T Consensus       543 FCTVLEYceGNDLDFYL---KQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG  618 (775)
T KOG1151|consen  543 FCTVLEYCEGNDLDFYL---KQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG  618 (775)
T ss_pred             ceeeeeecCCCchhHHH---HhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence            78999999999999999   4466789999999999999999999998 578999999999999954   5789999999


Q ss_pred             cceecCCCcc
Q 005825          656 LARMFGGDEL  665 (675)
Q Consensus       656 la~~~~~~~~  665 (675)
                      |++++.++..
T Consensus       619 LSKIMdddSy  628 (775)
T KOG1151|consen  619 LSKIMDDDSY  628 (775)
T ss_pred             hhhhccCCcc
Confidence            9999976643

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.84  E-value=1.1e-20  Score=193.19  Aligned_cols=140  Identities=26%  Similarity=0.418  Sum_probs=125.8

Q ss_pred             eCCcCceeEEEEEEcC-CcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCH
Q 005825          516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL  591 (675)
Q Consensus       516 IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL  591 (675)
                      ||+|+||.||+++... ++.+++|.+.....   ...+.+.+|+.++.+++||||+++++.+..+...++||||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999998864 89999999875432   3456789999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          592 DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       592 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      .+++..   ...+++..+..++.||++||+|||+.+   ++|+||+|+||++++++.+||+|||++....
T Consensus        81 ~~~l~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~  144 (265)
T cd05579          81 ASLLEN---VGSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGL  144 (265)
T ss_pred             HHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcc
Confidence            999853   236899999999999999999999987   9999999999999999999999999988653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.84  E-value=1.1e-20  Score=229.35  Aligned_cols=143  Identities=28%  Similarity=0.485  Sum_probs=123.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ...|...+.||+|+||.||+|+. .+++.||||+++.....    ...|++++++++|||||+++++|.+.+..++||||
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence            34577778999999999999986 57899999998753221    23468899999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +++|+|.++++      .++|.++..|+.|||+||+|||+.+..+|+||||||+||+++.++.+++. ||++...
T Consensus       765 ~~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~  832 (968)
T PLN00113        765 IEGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLL  832 (968)
T ss_pred             CCCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccc
Confidence            99999999993      27899999999999999999997766679999999999999999988876 7766543

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.84  E-value=3.5e-20  Score=189.98  Aligned_cols=141  Identities=27%  Similarity=0.368  Sum_probs=125.9

Q ss_pred             eCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCH
Q 005825          516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL  591 (675)
Q Consensus       516 IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL  591 (675)
                      ||+|+||.||+++.. +++.+|+|.+....   ....+.+.+|+.++++++||||+++++.+.++...++||||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            699999999999875 48899999987532   23446799999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          592 DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       592 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      .+++..   ...+++..+..++.|++.||+|||+.+   ++|+||||+||+++.++.+||+|||+++.+..
T Consensus        81 ~~~l~~---~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~  145 (262)
T cd05572          81 WTILRD---RGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS  145 (262)
T ss_pred             HHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence            999943   345788999999999999999999987   99999999999999999999999999987754

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.84  E-value=4.5e-20  Score=191.35  Aligned_cols=148  Identities=33%  Similarity=0.526  Sum_probs=129.9

Q ss_pred             cceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeEEEEEE
Q 005825          510 FSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEKILILE  584 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~~lV~E  584 (675)
                      |++.++||+|+||.||+|+.. +++.+|+|++....  ....+.+..|+.++++++|||++++++++...  +..++|||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            567889999999999999875 48899999998642  33456788999999999999999999999988  78999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |+++ +|.+++...  ...+++..+..++.||+.||+|||+.+   ++|+||||+||++++++.+||+|||+++.+...
T Consensus        81 ~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840          81 YMDH-DLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             cccc-cHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence            9985 888887432  246889999999999999999999987   999999999999999999999999999877544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.84  E-value=6.2e-20  Score=191.64  Aligned_cols=149  Identities=30%  Similarity=0.477  Sum_probs=126.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|++.+.||+|++|.||+|+.. +++.||+|.+....  ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            57899999999999999999875 68899999986532  2334678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-CCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-DMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DFGla~~~~  661 (675)
                      |++ ++|.+++... ....+++.....++.||+.||+|||+++   ++||||||+||++++ ++.+||+|||+++.+.
T Consensus        82 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~  154 (294)
T PLN00009         82 YLD-LDLKKHMDSS-PDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFG  154 (294)
T ss_pred             ccc-ccHHHHHHhC-CCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence            996 5777776432 2223577788889999999999999987   999999999999985 5679999999998654

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.84  E-value=2.9e-20  Score=194.71  Aligned_cols=152  Identities=30%  Similarity=0.481  Sum_probs=129.9

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC----
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG----  577 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~----  577 (675)
                      ...++|++.++||+|+||.||+|... +++.||||+++...  ......+..|+.++++++||||+++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            35578999999999999999999875 58899999997532  233456788999999999999999999987655    


Q ss_pred             ------eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEE
Q 005825          578 ------EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI  651 (675)
Q Consensus       578 ------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl  651 (675)
                            ..++|+||+++ ++..++..  ....+++.....++.||+.||+|||+.+   |+|+||||+||++++++.+||
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl  157 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLES--GLVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKL  157 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEe
Confidence                  78999999986 66666633  2346889999999999999999999987   999999999999999999999


Q ss_pred             eeeccceecCC
Q 005825          652 SDFGLARMFGG  662 (675)
Q Consensus       652 ~DFGla~~~~~  662 (675)
                      +|||+++.+..
T Consensus       158 ~dfg~~~~~~~  168 (302)
T cd07864         158 ADFGLARLYNS  168 (302)
T ss_pred             CcccccccccC
Confidence            99999987643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.84  E-value=3.6e-20  Score=204.36  Aligned_cols=170  Identities=28%  Similarity=0.462  Sum_probs=143.8

Q ss_pred             cHHHHHHhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEe-
Q 005825          499 SLASVAAATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIE-  575 (675)
Q Consensus       499 ~~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~-  575 (675)
                      .+..+...++.|++.+.||+|.+|.||+++. .+++.+|||++... ....+++..|..+++.. +|||++.++|++.. 
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            3445566778899999999999999999975 56888999998763 34457788889999887 69999999999964 


Q ss_pred             ----CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEE
Q 005825          576 ----QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI  651 (675)
Q Consensus       576 ----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl  651 (675)
                          ++.+|||||||.+||..++++... ...+.|..+..|+..+++||.+||...   +||||||-.||||++++.|||
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKL  164 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKL  164 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEE
Confidence                458999999999999999997654 667899999999999999999999887   999999999999999999999


Q ss_pred             eeeccceecCCCcccCCCCceecC
Q 005825          652 SDFGLARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       652 ~DFGla~~~~~~~~~~~~~~~~GT  675 (675)
                      .|||++..+...-  +...+.+||
T Consensus       165 vDFGvSaQldsT~--grRnT~iGt  186 (953)
T KOG0587|consen  165 VDFGVSAQLDSTV--GRRNTFIGT  186 (953)
T ss_pred             eeeeeeeeeeccc--ccccCcCCC
Confidence            9999999885443  333345676

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.84  E-value=5.8e-20  Score=191.19  Aligned_cols=146  Identities=26%  Similarity=0.411  Sum_probs=129.6

Q ss_pred             cceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          510 FSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      |...++||+|++|.||++.. .+++.+++|++........+.+.+|+.+++.++||||+++++++...+..++|+||+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            44457999999999999986 46889999998755445566788999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++|.+++..    ..+++..+..++.|++.||+|||+++   |+||||||+||++++++.+||+|||+++....
T Consensus       101 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~  167 (285)
T cd06648         101 GALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSK  167 (285)
T ss_pred             CCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhcc
Confidence            999999843    35788999999999999999999987   99999999999999999999999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.84  E-value=1.3e-20  Score=194.72  Aligned_cols=150  Identities=30%  Similarity=0.468  Sum_probs=133.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ++|.+.+.||+|+||.||+++.. +++.||+|.+...   .....+.+..|+.++.+++ ||||+++++++...+..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            47889999999999999999875 6899999998753   2233467889999999998 99999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++..   ...+++.....++.|++.||+|||+.+   ++|+||||+||++++++.++|+|||++..+..
T Consensus        81 ~e~~~~~~L~~~l~~---~~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581          81 LEYAPNGELLQYIRK---YGSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             EcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            999999999999843   346899999999999999999999987   99999999999999999999999999987754


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       155 ~  155 (280)
T cd05581         155 N  155 (280)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.84  E-value=4.7e-20  Score=191.75  Aligned_cols=151  Identities=31%  Similarity=0.468  Sum_probs=135.0

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..++.|+..+.||+|++|.||++... +++.+++|.++.... ..+.+..|++++++++|+||+++++.+...+..++|+
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            35567888899999999999999876 588999999976433 5678899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||+++++|.+++....  ..+++..+..++.+++.||+|||..+   |+|+||||+||+++.++.+||+|||++..+.
T Consensus        95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  167 (286)
T cd06614          95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLT  167 (286)
T ss_pred             eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence            9999999999995422  36899999999999999999999987   9999999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.83  E-value=2.5e-20  Score=198.74  Aligned_cols=149  Identities=30%  Similarity=0.500  Sum_probs=127.8

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeC--CeE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQ--GEK  579 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~--~~~  579 (675)
                      ..++|++.+.||+|+||.||+|... +++.+|||++...  .......+..|+.+++++ +||||+++++++...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            3567888899999999999999875 5889999998642  223445677899999999 999999999998654  368


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||++ ++|..++..    ..+++..+..++.||+.||+|||+.+   |+||||||+||++++++.+||+|||+++.
T Consensus        85 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~  156 (337)
T cd07852          85 YLVFEYME-TDLHAVIRA----NILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARS  156 (337)
T ss_pred             EEEecccc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence            99999997 589888743    26788999999999999999999987   99999999999999999999999999987


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      +..
T Consensus       157 ~~~  159 (337)
T cd07852         157 LSE  159 (337)
T ss_pred             ccc
Confidence            643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.83  E-value=1.8e-20  Score=192.15  Aligned_cols=149  Identities=28%  Similarity=0.375  Sum_probs=131.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|+..+.||+|+||.||++... +++.+|+|.+.... ....+++.+|+.++++++||||+++++.+...+..++|+||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            35777789999999999999875 58899999987643 34456789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHh-cCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH-YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++++|.+++....  ..++......++.|++.||+|||+ .+   ++|+||||+||++++++.+||+|||++..+.
T Consensus        81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~  152 (265)
T cd06605          81 MDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLV  152 (265)
T ss_pred             cCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence            99999999985422  568888899999999999999998 66   9999999999999999999999999987653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.83  E-value=4.2e-20  Score=197.65  Aligned_cols=150  Identities=26%  Similarity=0.399  Sum_probs=129.1

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC----
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG----  577 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~----  577 (675)
                      ...++|++.+.||+|+||.||++.. .+++.||||+++...  ....+.+..|+.++++++||||+++++++....    
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence            3567899999999999999999975 468999999986432  223456889999999999999999999987553    


Q ss_pred             --eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          578 --EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       578 --~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                        ..++||||+ +++|..++..    ..+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||
T Consensus        92 ~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg  163 (343)
T cd07880          92 FHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFG  163 (343)
T ss_pred             cceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecc
Confidence              458999998 7799888732    35889999999999999999999987   9999999999999999999999999


Q ss_pred             cceecCC
Q 005825          656 LARMFGG  662 (675)
Q Consensus       656 la~~~~~  662 (675)
                      +++....
T Consensus       164 ~~~~~~~  170 (343)
T cd07880         164 LARQTDS  170 (343)
T ss_pred             ccccccc
Confidence            9987644

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.83  E-value=3.8e-20  Score=189.32  Aligned_cols=156  Identities=26%  Similarity=0.450  Sum_probs=130.7

Q ss_pred             CcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe--CCeEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE--QGEKILIL  583 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~--~~~~~lV~  583 (675)
                      +|++.+.||.|+||.||++.. .+++.+|+|.+...  .....+++..|+.++++++||||+++++++..  +...+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            478889999999999999976 45789999998743  23345678899999999999999999998764  34678999


Q ss_pred             EecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcC--CCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYS--RFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||+++++|.+++... .....+++...+.++.+++.||+|||..+  ..+++|+||||+||++++++.+||+|||+++.+
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            999999999998542 22456899999999999999999999332  334999999999999999999999999999987


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ....
T Consensus       161 ~~~~  164 (265)
T cd08217         161 GHDS  164 (265)
T ss_pred             cCCc
Confidence            5443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.83  E-value=3.3e-20  Score=193.06  Aligned_cols=148  Identities=28%  Similarity=0.368  Sum_probs=128.9

Q ss_pred             CcceeeeeCCcCceeEEEEEE----cCCcEEEEEEecCcC----ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeE
Q 005825          509 NFSMECKLGEGGFGPVYKGRL----LNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~  579 (675)
                      +|++.+.||+|++|.||+++.    .+++.||||.+++..    ....+.+..|+.++.++ +||||+++++.+......
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            477889999999999999974    357889999987432    22345788999999999 599999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++..   ...+++.....++.|+++||.|||+.+   ++||||||+||+++.++.+||+|||+++.
T Consensus        81 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~  154 (288)
T cd05583          81 HLILDYVNGGELFTHLYQ---REHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE  154 (288)
T ss_pred             EEEEecCCCCcHHHHHhh---cCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence            999999999999999843   345788899999999999999999887   99999999999999999999999999987


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      +..
T Consensus       155 ~~~  157 (288)
T cd05583         155 FLA  157 (288)
T ss_pred             ccc
Confidence            643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.83  E-value=5.2e-20  Score=193.78  Aligned_cols=150  Identities=33%  Similarity=0.478  Sum_probs=128.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~~l  581 (675)
                      .++|++.++||+|+||.||+|... +++.||+|.++....  .....+.+|+.++++++|+||+++++++.+.  +..++
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            468999999999999999999874 589999999874322  2234567899999999999999999998765  46899


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++ +|.+++...  ...+++.++..++.|+++||+|||+.+   ++||||||+||++++++.+||+|||+++.+.
T Consensus        86 v~e~~~~-~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          86 VMEYCEQ-DLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             EEecCCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            9999975 788877432  356899999999999999999999988   9999999999999999999999999998875


Q ss_pred             C
Q 005825          662 G  662 (675)
Q Consensus       662 ~  662 (675)
                      .
T Consensus       160 ~  160 (309)
T cd07845         160 L  160 (309)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.83  E-value=3.9e-20  Score=197.25  Aligned_cols=148  Identities=28%  Similarity=0.431  Sum_probs=127.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-----eE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-----EK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-----~~  579 (675)
                      .++|++.++||+|+||.||+|+. .+++.||||.++... ......+..|+.++++++||||+++++++....     ..
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            47899999999999999999976 468999999987432 334567889999999999999999999876543     57


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++|+||+++ +|..++.    ...+++.....++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++.
T Consensus        84 ~lv~e~~~~-~l~~~~~----~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~  155 (336)
T cd07849          84 YIVQELMET-DLYKLIK----TQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI  155 (336)
T ss_pred             EEEehhccc-CHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceee
Confidence            999999975 7777763    235888999999999999999999987   99999999999999999999999999987


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      ...
T Consensus       156 ~~~  158 (336)
T cd07849         156 ADP  158 (336)
T ss_pred             ccc
Confidence            643

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.83  E-value=5.3e-20  Score=193.30  Aligned_cols=151  Identities=28%  Similarity=0.482  Sum_probs=127.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-----
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-----  577 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-----  577 (675)
                      ..++|++.++||+|+||.||+++.. +++.||||.+....  ......+.+|+.++++++||||+++++++...+     
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence            3467999999999999999999864 58999999986432  222345678999999999999999999987654     


Q ss_pred             ---eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeee
Q 005825          578 ---EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDF  654 (675)
Q Consensus       578 ---~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DF  654 (675)
                         ..++||||+++ +|..++..  ....+++.+...++.||+.||+|||+++   ++|+||||+||++++++.+||+||
T Consensus        90 ~~~~~~lv~e~~~~-~l~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~df  163 (310)
T cd07865          90 YKGSFYLVFEFCEH-DLAGLLSN--KNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADF  163 (310)
T ss_pred             CCceEEEEEcCCCc-CHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcC
Confidence               35999999975 78777743  2335889999999999999999999987   999999999999999999999999


Q ss_pred             ccceecCC
Q 005825          655 GLARMFGG  662 (675)
Q Consensus       655 Gla~~~~~  662 (675)
                      |+++.+..
T Consensus       164 g~~~~~~~  171 (310)
T cd07865         164 GLARAFSL  171 (310)
T ss_pred             CCcccccC
Confidence            99987643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.83  E-value=6.2e-20  Score=190.26  Aligned_cols=141  Identities=30%  Similarity=0.352  Sum_probs=118.5

Q ss_pred             eeCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHH---HHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          515 KLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEML---LIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~---il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      .||+|+||.||+++.. +++.||+|.+.....   .....+..|..   +++...||||+++++++.+.+..++||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999864 588999999875321   12223444443   3444579999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +++|..++.   ....+++..+..++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++.+.
T Consensus        81 g~~L~~~l~---~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~  148 (278)
T cd05606          81 GGDLHYHLS---QHGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS  148 (278)
T ss_pred             CCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccC
Confidence            999999884   3456899999999999999999999987   9999999999999999999999999998664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.83  E-value=4e-20  Score=193.17  Aligned_cols=142  Identities=27%  Similarity=0.426  Sum_probs=127.3

Q ss_pred             eeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCHH
Q 005825          514 CKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLD  592 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~  592 (675)
                      .+||+|+||.||++.. .+++.||||++..........+.+|+.++++++|+||+++++.+...+..++||||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            5799999999999987 468999999987544455667999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          593 VFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       593 ~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++..    ..+++.....++.|++.||+|||+.+   ++|+||||+||++++++.+||+|||++..+..
T Consensus       106 ~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~  168 (292)
T cd06657         106 DIVTH----TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK  168 (292)
T ss_pred             HHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccc
Confidence            98732    34788999999999999999999987   99999999999999999999999999886643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.83  E-value=4.2e-20  Score=188.50  Aligned_cols=150  Identities=27%  Similarity=0.495  Sum_probs=130.9

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|++.+.||+|+||.||++... ++..+|+|.+...  .....+.+.+|+.++++++|+||+++++.+.+.+..++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            4788899999999999999875 4889999998653  223456788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-CeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++... ....+++..+..++.++++||.|||+.+   ++|+||||+||++++++ .+||+|||++..+..
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (257)
T cd08225          81 CDGGDLMKRINRQ-RGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND  154 (257)
T ss_pred             CCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence            9999999998543 2335789999999999999999999987   99999999999998875 569999999987754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.83  E-value=7.4e-20  Score=196.52  Aligned_cols=149  Identities=29%  Similarity=0.399  Sum_probs=127.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC------
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ------  576 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~------  576 (675)
                      ..++|+..+.||+|+||.||+++.. +++.||||.+...  ......++.+|+.++++++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            4578999999999999999999864 6899999998643  223345678899999999999999999998643      


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecc
Q 005825          577 GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL  656 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGl  656 (675)
                      ...++||||++ ++|.+.+..     .++......++.|++.||+|||..+   |+||||||+||++++++.+||+|||+
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~  164 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL  164 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcc
Confidence            35799999996 478777732     2788888999999999999999987   99999999999999999999999999


Q ss_pred             ceecCCC
Q 005825          657 ARMFGGD  663 (675)
Q Consensus       657 a~~~~~~  663 (675)
                      ++.....
T Consensus       165 ~~~~~~~  171 (353)
T cd07850         165 ARTAGTS  171 (353)
T ss_pred             ceeCCCC
Confidence            9977543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.83  E-value=6.1e-20  Score=190.43  Aligned_cols=147  Identities=33%  Similarity=0.520  Sum_probs=128.4

Q ss_pred             cceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          510 FSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      |++.++||+|++|.||+|... +++.||+|++....  ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            566789999999999999864 68999999987532  223467889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      + ++|.+++.... ...+++..+..++.|+++||+|||+++   ++||||+|+||++++++.+||+|||+++.+.
T Consensus        81 ~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~  150 (283)
T cd07835          81 D-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFG  150 (283)
T ss_pred             C-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccC
Confidence            5 68998885322 236899999999999999999999987   9999999999999999999999999998664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.83  E-value=1.1e-19  Score=192.05  Aligned_cols=149  Identities=32%  Similarity=0.501  Sum_probs=128.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      +.|...+.||+|+||.||+++.. +++.||+|.+.....   .....+..|+.++++++|||++++++++.+.+..++||
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence            34777889999999999999864 588999999874322   23457889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++ +|.+++..  ....+++.++..++.+++.||.|||+.+   |+||||+|+||+++.++.+||+|||+++....
T Consensus       105 e~~~g-~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (317)
T cd06635         105 EYCLG-SASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP  177 (317)
T ss_pred             eCCCC-CHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC
Confidence            99975 77776643  2345889999999999999999999987   99999999999999999999999999886643

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.83  E-value=3.7e-20  Score=197.28  Aligned_cols=149  Identities=23%  Similarity=0.399  Sum_probs=128.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIE----QGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~----~~~~  579 (675)
                      ..+|++.+.||+|+||.||++... +++.||+|++....  ....+.+..|+.++++++||||+++++++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            368999999999999999999864 58999999987532  2345678889999999999999999988753    3468


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+. ++|.+++..   ...+++.....++.||+.||+|||+.+   |+||||||+||++++++.+||+|||+++.
T Consensus        84 ~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~  156 (334)
T cd07855          84 YVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARG  156 (334)
T ss_pred             EEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEeccccccee
Confidence            99999996 689888843   345899999999999999999999987   99999999999999999999999999987


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      +..
T Consensus       157 ~~~  159 (334)
T cd07855         157 LSS  159 (334)
T ss_pred             ecc
Confidence            643

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.83  E-value=5.9e-20  Score=195.95  Aligned_cols=149  Identities=26%  Similarity=0.418  Sum_probs=128.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC-----Ce
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ-----GE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~-----~~  578 (675)
                      .++|.+.+.||+|+||.||+++. .+++.||||.++..  ......++..|+.++++++|+||+++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            46799999999999999999986 45899999998753  233455678899999999999999999988654     35


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++||||+. ++|.+++.   ....+++.....++.|++.||.|||+++   ++||||||+||+++.++.+||+|||+++
T Consensus        84 ~~lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~  156 (337)
T cd07858          84 VYIVYELMD-TDLHQIIR---SSQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR  156 (337)
T ss_pred             EEEEEeCCC-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence            799999996 68888874   3346889999999999999999999987   9999999999999999999999999998


Q ss_pred             ecCC
Q 005825          659 MFGG  662 (675)
Q Consensus       659 ~~~~  662 (675)
                      ....
T Consensus       157 ~~~~  160 (337)
T cd07858         157 TTSE  160 (337)
T ss_pred             ccCC
Confidence            7744

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.83  E-value=1.4e-19  Score=184.11  Aligned_cols=152  Identities=24%  Similarity=0.436  Sum_probs=134.7

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|++.+.||+|+||.||++... +++.+++|++.....  ...+++..|++++++++|||++++.+.+...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            4788899999999999999875 588999999975432  4566789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++.... ....+++.....++.+++.||.|||+.+   ++|+||+|+||++++++.+||+|||++......
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  156 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST  156 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccC
Confidence            99999999985432 1356899999999999999999999987   999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.82  E-value=1.2e-19  Score=194.35  Aligned_cols=154  Identities=29%  Similarity=0.380  Sum_probs=130.6

Q ss_pred             HHHHHHhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC
Q 005825          500 LASVAAATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ  576 (675)
Q Consensus       500 ~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~  576 (675)
                      ..++...+++|.+.+.||+|+||.||++.. .+++.||+|+++...  ....+.+.+|+.++.+++||||+++++++...
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            345566789999999999999999999975 468999999997532  22346788899999999999999999988643


Q ss_pred             ------CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeE
Q 005825          577 ------GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPK  650 (675)
Q Consensus       577 ------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~k  650 (675)
                            ...++++|++ +++|..++..    ..+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+|
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~k  160 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELK  160 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEE
Confidence                  3467888876 7899887732    35889999999999999999999987   99999999999999999999


Q ss_pred             EeeeccceecC
Q 005825          651 ISDFGLARMFG  661 (675)
Q Consensus       651 l~DFGla~~~~  661 (675)
                      |+|||+++...
T Consensus       161 l~dfg~~~~~~  171 (345)
T cd07877         161 ILDFGLARHTD  171 (345)
T ss_pred             Eeccccccccc
Confidence            99999998764

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.82  E-value=1.1e-19  Score=188.31  Aligned_cols=146  Identities=25%  Similarity=0.370  Sum_probs=123.8

Q ss_pred             cceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeC--CeEEEEEE
Q 005825          510 FSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQ--GEKILILE  584 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~--~~~~lV~E  584 (675)
                      |++.++||+|+||.||+|+.. +++.||+|+++... .........|+.++.++. |+||+++++++.+.  +..++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            567889999999999999864 58899999987532 222334557888899885 99999999999987  88999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |++ ++|.+++...  ...+++.++..++.|++.||+|||+.+   ++||||||+||++++ +.+||+|||+++.+..
T Consensus        81 ~~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~  151 (282)
T cd07831          81 LMD-MNLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYS  151 (282)
T ss_pred             cCC-ccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence            997 5777777432  346899999999999999999999987   999999999999999 9999999999987643

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.1e-19  Score=186.02  Aligned_cols=142  Identities=24%  Similarity=0.329  Sum_probs=120.0

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHHHH-HhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEMLLI-AKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~il-~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.||+|+||.||+|... +++.||||.++....   .....+..|..++ ...+|+|++++++++...+..++||||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            57999999999999864 588999999875321   2223445555444 455899999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++|.+++..   ...+++..+..++.|++.||.|||+.+   ++|+||+|+||++++++.+||+|||+++...
T Consensus        82 ~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  148 (260)
T cd05611          82 GDCASLIKT---LGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGL  148 (260)
T ss_pred             CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceecc
Confidence            999999843   345788899999999999999999987   9999999999999999999999999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.82  E-value=1.6e-19  Score=192.11  Aligned_cols=146  Identities=30%  Similarity=0.415  Sum_probs=123.6

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-C--CcEEEEEEecCcC--ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeC----Ce
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-N--GEEVAVKRLSSQS--GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQ----GE  578 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~--g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~----~~  578 (675)
                      +|++.+.||+|+||.||+++.. .  +..||||++....  ....+.+..|+.++.++ +||||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            4788899999999999999864 3  7789999987532  22356788899999999 599999999976543    35


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++++||++ ++|.+++.   ....+++.....++.||+.||+|||+.+   |+||||||+||++++++.+||+|||+|+
T Consensus        81 ~~~~~e~~~-~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          81 LYLYEELME-ADLHQIIR---SGQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             EEEEEeccc-CCHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence            788899886 68988884   3456889999999999999999999987   9999999999999999999999999998


Q ss_pred             ecC
Q 005825          659 MFG  661 (675)
Q Consensus       659 ~~~  661 (675)
                      .+.
T Consensus       154 ~~~  156 (332)
T cd07857         154 GFS  156 (332)
T ss_pred             ecc
Confidence            764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.82  E-value=9.6e-20  Score=194.07  Aligned_cols=147  Identities=28%  Similarity=0.415  Sum_probs=126.3

Q ss_pred             CCcc-eeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccC--------------HHHHHHHHHHHHhcCCCceeeEEE
Q 005825          508 ENFS-MECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQG--------------LEEFKNEMLLIAKLQHRNLVRILG  571 (675)
Q Consensus       508 ~~f~-~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~--------------~~~f~~E~~il~~l~H~nIv~l~g  571 (675)
                      ++|. +.+.||+|+||.||+|+.. +++.||||.++......              ...+.+|++++++++||||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            4554 3467999999999999864 58999999986532211              125778999999999999999999


Q ss_pred             EEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEE
Q 005825          572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI  651 (675)
Q Consensus       572 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl  651 (675)
                      ++...+..++||||++ ++|.+++.   ....+++.....++.|++.||+|||+.+   |+|+||||+||+++.++.+||
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l~---~~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl  160 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVVD---RKIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKI  160 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEE
Confidence            9999999999999997 68988884   3345888999999999999999999987   999999999999999999999


Q ss_pred             eeeccceecC
Q 005825          652 SDFGLARMFG  661 (675)
Q Consensus       652 ~DFGla~~~~  661 (675)
                      +|||+++.+.
T Consensus       161 ~dfg~~~~~~  170 (335)
T PTZ00024        161 ADFGLARRYG  170 (335)
T ss_pred             CCccceeecc
Confidence            9999998775

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.82  E-value=1.4e-19  Score=192.32  Aligned_cols=150  Identities=29%  Similarity=0.439  Sum_probs=128.8

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe-CCeE
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE-QGEK  579 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~-~~~~  579 (675)
                      ...+++|++.+.||+|+||.||+++.. +++.||||++...  .....+.+..|+.++.+++||||+++.+++.. ....
T Consensus         6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   85 (328)
T cd07856           6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI   85 (328)
T ss_pred             eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence            346789999999999999999999764 6899999988642  22345678899999999999999999999876 4578


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+ +++|..++..    ..+++.....++.|++.||+|||+.+   |+||||||+||++++++.+||+|||+++.
T Consensus        86 ~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~  157 (328)
T cd07856          86 YFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI  157 (328)
T ss_pred             EEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccc
Confidence            9999998 5689888732    34678888889999999999999987   99999999999999999999999999986


Q ss_pred             cC
Q 005825          660 FG  661 (675)
Q Consensus       660 ~~  661 (675)
                      ..
T Consensus       158 ~~  159 (328)
T cd07856         158 QD  159 (328)
T ss_pred             cC
Confidence            53

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.82  E-value=2.9e-19  Score=184.12  Aligned_cols=149  Identities=23%  Similarity=0.326  Sum_probs=122.3

Q ss_pred             HHhcCCcceeeee--CCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeE
Q 005825          504 AAATENFSMECKL--GEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       504 ~~~~~~f~~~~~I--G~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~  579 (675)
                      ....++|.+.+.+  |+|+||.||+++. .+++.+|+|.+........     |+.....+ +||||+++++.+...+..
T Consensus        10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~   84 (267)
T PHA03390         10 VQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLKGH   84 (267)
T ss_pred             HHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCCee
Confidence            3445677776766  9999999999986 4588899999875322111     22222222 799999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-CeEEeeeccce
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLAR  658 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DFGla~  658 (675)
                      ++||||+++++|.+++..   ...+++.+...++.|+++||.|||+.+   ++||||||+||+++.++ .+||+|||+++
T Consensus        85 ~iv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~  158 (267)
T PHA03390         85 VLIMDYIKDGDLFDLLKK---EGKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCK  158 (267)
T ss_pred             EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence            999999999999999843   237899999999999999999999987   99999999999999988 99999999998


Q ss_pred             ecCCC
Q 005825          659 MFGGD  663 (675)
Q Consensus       659 ~~~~~  663 (675)
                      .+...
T Consensus       159 ~~~~~  163 (267)
T PHA03390        159 IIGTP  163 (267)
T ss_pred             ecCCC
Confidence            76543

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=6.5e-21  Score=193.41  Aligned_cols=162  Identities=28%  Similarity=0.341  Sum_probs=134.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCc---cCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSG---QGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~  580 (675)
                      ...+|..+.+||+|+||+|.+++-+. .+.+|||+|++...   ...+--+.|-++|+.. +-|.+++|..+++.-+++|
T Consensus       347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy  426 (683)
T KOG0696|consen  347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY  426 (683)
T ss_pred             eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence            34678889999999999999997654 67899999997632   2344566788888776 4689999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||+.||+|-.++.   .-+.+.+..+.-+|..||-||-+||+++   ||.||||.+||+||.+|++||+|||+++.-
T Consensus       427 FVMEyvnGGDLMyhiQ---Q~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEn  500 (683)
T KOG0696|consen  427 FVMEYVNGGDLMYHIQ---QVGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  500 (683)
T ss_pred             eEEEEecCchhhhHHH---HhcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccc
Confidence            9999999999988873   3445667778889999999999999998   999999999999999999999999999853


Q ss_pred             CCCcccCCCCceecC
Q 005825          661 GGDELQGNTKRIVGT  675 (675)
Q Consensus       661 ~~~~~~~~~~~~~GT  675 (675)
                      --+  ...|++.+||
T Consensus       501 i~~--~~TTkTFCGT  513 (683)
T KOG0696|consen  501 IFD--GVTTKTFCGT  513 (683)
T ss_pred             ccC--CcceeeecCC
Confidence            222  2346677887

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.82  E-value=8e-20  Score=186.17  Aligned_cols=152  Identities=29%  Similarity=0.471  Sum_probs=132.7

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|++.++||+|+||.||+++.. +++.+|+|.+....  .....++..|++++++++|+||+++++++.+....++||||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            4788899999999999999754 68899999987532  23356788999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++.+.. ....+++.....++.++++||+|||+.+   ++|+||+|+||++++++.+||+|||+++.+...
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~  156 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN  156 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence            99999999985421 2356888999999999999999999987   999999999999999999999999999877543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.82  E-value=3.3e-20  Score=195.66  Aligned_cols=153  Identities=25%  Similarity=0.333  Sum_probs=130.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--------cCHHHHHHHHHHHHhcC---CCceeeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--------QGLEEFKNEMLLIAKLQ---HRNLVRILGCCI  574 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~f~~E~~il~~l~---H~nIv~l~g~~~  574 (675)
                      ..+|..++.+|+|+||.|..|.++ +..+|+||.+.+...        ...-.+-.|+.||+.++   |+||++++.+|+
T Consensus       560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE  639 (772)
T KOG1152|consen  560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE  639 (772)
T ss_pred             cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence            356888999999999999999764 467899999876421        11223557999999997   999999999999


Q ss_pred             eCCeEEEEEEec-CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEee
Q 005825          575 EQGEKILILEYM-PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISD  653 (675)
Q Consensus       575 ~~~~~~lV~Ey~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~D  653 (675)
                      +++..||+||-. ++.+|.+++   ..+..+.+.+...|+.||+.|+++||.++   |||||||-+|+.++.+|-+||+|
T Consensus       640 ddd~yyl~te~hg~gIDLFd~I---E~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klid  713 (772)
T KOG1152|consen  640 DDDYYYLETEVHGEGIDLFDFI---EFKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLID  713 (772)
T ss_pred             cCCeeEEEecCCCCCcchhhhh---hccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEee
Confidence            999999999977 466777777   45567899999999999999999999998   99999999999999999999999


Q ss_pred             eccceecCCCcc
Q 005825          654 FGLARMFGGDEL  665 (675)
Q Consensus       654 FGla~~~~~~~~  665 (675)
                      ||-|...+....
T Consensus       714 fgsaa~~ksgpf  725 (772)
T KOG1152|consen  714 FGSAAYTKSGPF  725 (772)
T ss_pred             ccchhhhcCCCc
Confidence            999988765543

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.81  E-value=9.1e-20  Score=193.71  Aligned_cols=148  Identities=29%  Similarity=0.436  Sum_probs=130.1

Q ss_pred             CcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-----eEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-----EKI  580 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-----~~~  580 (675)
                      +|++.+.||+|+||.||+|+... ++.||||++....  ....+.+..|+.+++.++||||+++++++...+     ..+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            47888999999999999998754 8999999987643  344568999999999999999999999998775     789


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||++ ++|.+++..   ...+++..+..++.+++.||+|||+.+   |+||||||+|||+++++.+||+|||++...
T Consensus        81 lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~  153 (330)
T cd07834          81 IVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV  153 (330)
T ss_pred             EEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence            9999998 488888843   337899999999999999999999987   999999999999999999999999999987


Q ss_pred             CCC
Q 005825          661 GGD  663 (675)
Q Consensus       661 ~~~  663 (675)
                      ...
T Consensus       154 ~~~  156 (330)
T cd07834         154 DPD  156 (330)
T ss_pred             ccc
Confidence            543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.81  E-value=6.2e-21  Score=217.47  Aligned_cols=152  Identities=31%  Similarity=0.427  Sum_probs=130.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .+-+++...+||.|.||.||-|.. .+|+..|||-++..  .........+|+.++..+.|||+|+++|+-.+.+..+|.
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence            344566668999999999999975 56899999988754  334556788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++|+|.+.+.   ..+..++....-+..|++.|++|||+++   |+||||||+||+|+.+|.+|++|||-|+.+..
T Consensus      1313 MEyC~~GsLa~ll~---~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLE---HGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred             HHHhccCcHHHHHH---hcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecC
Confidence            99999999999983   3334555555667889999999999998   99999999999999999999999999998855


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus      1387 ~ 1387 (1509)
T KOG4645|consen 1387 N 1387 (1509)
T ss_pred             c
Confidence            4

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.81  E-value=1.9e-19  Score=188.22  Aligned_cols=150  Identities=26%  Similarity=0.385  Sum_probs=126.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .++|++.+.||+|+||.||+|+..+ ++.||||.++... .....++..|+.++.+.. ||||+++++++.+....++||
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            3678888999999999999998865 8999999997532 233456777887777775 999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||+++ +|..++...  ...+++..+..++.++++||+|||+..  +|+||||+|+||++++++.+||+|||+++.+.
T Consensus        94 e~~~~-~l~~l~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~  166 (296)
T cd06618          94 ELMST-CLDKLLKRI--QGPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLV  166 (296)
T ss_pred             eccCc-CHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence            99854 677666332  236889999999999999999999742  39999999999999999999999999998764

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.81  E-value=2.3e-20  Score=174.16  Aligned_cols=153  Identities=27%  Similarity=0.397  Sum_probs=127.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc-CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ..+.....+.||+|++|.|-+-++ .+|+..|+|++... ..+..++..+|+++..+. ..|.+|+++|........++.
T Consensus        44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc  123 (282)
T KOG0984|consen   44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC  123 (282)
T ss_pred             chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence            344555567899999999988875 46999999999864 345567788899877654 799999999999999999999


Q ss_pred             EEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          583 LEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||.| ..||+.+-.+- .+...+++.-.-+|+..|.+||.|||++-  .+||||+||+|||++.+|++||+|||++-.+.
T Consensus       124 ME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~  200 (282)
T KOG0984|consen  124 MELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLV  200 (282)
T ss_pred             HHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence            9999 56888775321 34566788888899999999999999975  69999999999999999999999999998764

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.81  E-value=1.5e-19  Score=190.55  Aligned_cols=144  Identities=23%  Similarity=0.223  Sum_probs=122.4

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCC
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKS  590 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs  590 (675)
                      .+.+|.|+++.|++++. +++.||||++...  .....+.+..|+.++++++||||+++++++.+.+..+++|||+++++
T Consensus         7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~   85 (314)
T cd08216           7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS   85 (314)
T ss_pred             hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence            34455556666666554 6899999998754  34456789999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          591 LDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       591 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |.+++.... ...+++.....++.|+++||+|||+++   |+||||||+||+++.++.+||+|||.+..+.
T Consensus        86 l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~  152 (314)
T cd08216          86 CEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMI  152 (314)
T ss_pred             HHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeec
Confidence            999986432 235788888999999999999999987   9999999999999999999999999987653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.81  E-value=4.6e-19  Score=183.91  Aligned_cols=149  Identities=33%  Similarity=0.520  Sum_probs=125.3

Q ss_pred             cceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCc--cCHHHHHHHHHHHHhc---CCCceeeEEEEEEeCCe-----
Q 005825          510 FSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSG--QGLEEFKNEMLLIAKL---QHRNLVRILGCCIEQGE-----  578 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l---~H~nIv~l~g~~~~~~~-----  578 (675)
                      |++.+.||+|+||.||+|+... ++.+|+|+++....  .....+..|+.++.++   .||||+++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            5678999999999999999764 89999999974322  2234566788777666   59999999999988776     


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .+++|||+++ +|.+++.... ...+++..+..++.|+++||.|||+.+   ++|+||||+||++++++.+||+|||+++
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~  155 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR  155 (287)
T ss_pred             eEEEehhccc-CHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence            8999999975 7888875422 235899999999999999999999987   9999999999999999999999999998


Q ss_pred             ecCCC
Q 005825          659 MFGGD  663 (675)
Q Consensus       659 ~~~~~  663 (675)
                      .+...
T Consensus       156 ~~~~~  160 (287)
T cd07838         156 IYSFE  160 (287)
T ss_pred             eccCC
Confidence            87543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.81  E-value=1.4e-19  Score=187.52  Aligned_cols=148  Identities=32%  Similarity=0.433  Sum_probs=127.8

Q ss_pred             cceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEEEec
Q 005825          510 FSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      |++.+.||+|+||.||+|+.. +++.||||++..... .......+|+..+++++ ||||+++++++.+++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            567789999999999999875 478999999875422 22334567999999999 999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                       +++|.+++.... ...+++..+..++.|++.+|.|||+++   ++|+||||+||++++++.+||+|||+++.+..
T Consensus        81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830          81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence             889988885432 246899999999999999999999987   99999999999999999999999999987643

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.81  E-value=4.7e-19  Score=186.98  Aligned_cols=145  Identities=33%  Similarity=0.490  Sum_probs=125.2

Q ss_pred             cceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          510 FSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      |...++||+|+||.||+|+.. +++.|++|++.....   ...+.+..|+.++++++|||++++++++.+.+..++||||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            666688999999999999864 588999999874322   2335688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +. ++|.+++..  ....+++.++..++.||+.||.|||+.+   ++|+||||+||++++++.+||+|||++...
T Consensus       103 ~~-~~l~~~l~~--~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~  171 (313)
T cd06633         103 CL-GSASDLLEV--HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKS  171 (313)
T ss_pred             CC-CCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCccc
Confidence            96 567666632  2345889999999999999999999987   999999999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.81  E-value=1.8e-19  Score=191.55  Aligned_cols=143  Identities=24%  Similarity=0.304  Sum_probs=123.1

Q ss_pred             eeeCCc--CceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEG--GFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G--~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.||+|  +||+||+++.. +++.||||.+....  ....+.+.+|+.+++.++||||+++++++..++..++||||+++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            467777  99999999864 68999999987532  22346788999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ++|.+++.... ...+++.....++.|++.||+|||+.+   |+||||||+|||++.++.+|++||+.+...
T Consensus        84 ~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~  151 (328)
T cd08226          84 GSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSL  151 (328)
T ss_pred             CCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence            99999885432 234788888999999999999999987   999999999999999999999999865433

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.81  E-value=3e-19  Score=190.91  Aligned_cols=146  Identities=30%  Similarity=0.447  Sum_probs=124.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~------  577 (675)
                      .++|...+.||+|+||.||+|+.. +++.||||+++...  ......+..|+.++++++||||+++++++....      
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            478999999999999999999864 68999999987532  223456889999999999999999999987543      


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      +.++|+||+.. +|..++     ...+++.....++.|++.||+|||+.+   |+||||||+||+++.++.+||+|||++
T Consensus        94 ~~~lv~e~~~~-~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~  164 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA  164 (342)
T ss_pred             eEEEEeccccc-CHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCC
Confidence            46899999964 776655     234788899999999999999999987   999999999999999999999999999


Q ss_pred             eecC
Q 005825          658 RMFG  661 (675)
Q Consensus       658 ~~~~  661 (675)
                      +...
T Consensus       165 ~~~~  168 (342)
T cd07879         165 RHAD  168 (342)
T ss_pred             cCCC
Confidence            8753

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.81  E-value=1.6e-19  Score=187.88  Aligned_cols=150  Identities=29%  Similarity=0.396  Sum_probs=124.0

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +|...++||+|+||.||+++.. +++.+|+|.+.... ......+..|+.++.++. ||||+++++++..++..+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            5566678999999999999864 58999999987532 234567889999999996 99999999999999999999999


Q ss_pred             cCCCCHHHHhcC--CCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++. ++..+...  ......+++.....++.+++.||+|||+..  +|+||||||+||++++++.+||+|||+++.+.
T Consensus        85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616          85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            864 55443211  112356889999999999999999999752  39999999999999999999999999998654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.81  E-value=2.1e-19  Score=188.85  Aligned_cols=150  Identities=33%  Similarity=0.513  Sum_probs=126.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~------  577 (675)
                      .++|++.++||+|+||.||+|+.. +++.+|||++.....  .....+.+|++++++++||||+++++++.+..      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            478999999999999999999864 588999999864322  22346788999999999999999999875443      


Q ss_pred             --eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          578 --EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       578 --~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                        ..++||||+++ +|...+..  ....+++..+..++.|+++||+|||+++   |+|+||||+||++++++.+||+|||
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLEN--PSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence              46999999975 66666643  2346899999999999999999999987   9999999999999999999999999


Q ss_pred             cceecCC
Q 005825          656 LARMFGG  662 (675)
Q Consensus       656 la~~~~~  662 (675)
                      +++....
T Consensus       161 ~~~~~~~  167 (311)
T cd07866         161 LARPYDG  167 (311)
T ss_pred             cchhccC
Confidence            9987643

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.81  E-value=2.3e-19  Score=185.72  Aligned_cols=148  Identities=33%  Similarity=0.519  Sum_probs=129.3

Q ss_pred             cceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          510 FSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      |+..+.||+|++|.||+++.. +++.+++|.++....  .....+..|+.++++++|+||+++++++..++..++||||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            456789999999999999874 688999999875432  24567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ++ +|.+++...  ...+++..+..++.+++.||.|||+.+   |+|+||||+||++++++.+||+|||.+..+...
T Consensus        81 ~~-~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~  151 (283)
T cd05118          81 DT-DLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSP  151 (283)
T ss_pred             CC-CHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence            75 888877432  246889999999999999999999987   999999999999999999999999999877544

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.81  E-value=5.8e-19  Score=184.60  Aligned_cols=148  Identities=20%  Similarity=0.312  Sum_probs=110.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcCccCH-----------HHHHHHHHHHHhcCCCceeeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQSGQGL-----------EEFKNEMLLIAKLQHRNLVRILG  571 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~~~~-----------~~f~~E~~il~~l~H~nIv~l~g  571 (675)
                      .+.|++.++||+|+||.||+|+..+    +..+|+|..........           .....+...+..++|+|++++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            4689999999999999999998654    34566665432221111           11223334556678999999999


Q ss_pred             EEEeCC----eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC
Q 005825          572 CCIEQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM  647 (675)
Q Consensus       572 ~~~~~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~  647 (675)
                      ++....    ..++++|++. .++.+.+..   ....++.....|+.|++.||+|||+.+   |+||||||+|||++.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~  163 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNN  163 (294)
T ss_pred             eeeEecCCceEEEEEEehhc-cCHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCC
Confidence            876544    3467788764 355555522   223567788899999999999999987   99999999999999999


Q ss_pred             CeEEeeeccceecC
Q 005825          648 NPKISDFGLARMFG  661 (675)
Q Consensus       648 ~~kl~DFGla~~~~  661 (675)
                      .+||+|||+|+.+.
T Consensus       164 ~~~l~DFGla~~~~  177 (294)
T PHA02882        164 RGYIIDYGIASHFI  177 (294)
T ss_pred             cEEEEEcCCceeec
Confidence            99999999998774

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.80  E-value=2.6e-19  Score=191.42  Aligned_cols=147  Identities=29%  Similarity=0.418  Sum_probs=126.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC---------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ---------  576 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~---------  576 (675)
                      ..+|.+.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+.++++++||||+++++++...         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            368999999999999999999864 5889999998765556667899999999999999999999776543         


Q ss_pred             -----CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-CCCeE
Q 005825          577 -----GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-DMNPK  650 (675)
Q Consensus       577 -----~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-~~~~k  650 (675)
                           ...++||||++ ++|.+++..    ..+++.....++.||+.||.|||+.+   |+||||||+||+++. ++.+|
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~k  155 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEE
Confidence                 35789999997 588887732    35788999999999999999999987   999999999999974 56789


Q ss_pred             EeeeccceecC
Q 005825          651 ISDFGLARMFG  661 (675)
Q Consensus       651 l~DFGla~~~~  661 (675)
                      |+|||+++.+.
T Consensus       156 l~dfg~~~~~~  166 (342)
T cd07854         156 IGDFGLARIVD  166 (342)
T ss_pred             ECCcccceecC
Confidence            99999998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.80  E-value=4.7e-21  Score=184.95  Aligned_cols=150  Identities=30%  Similarity=0.404  Sum_probs=123.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc-cCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++.+.+..||.|+||+|+|-.. +.|+.+|||+++.... ...++++.|.+...+- +.||||+++|.+..++.-|+.||
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME  143 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME  143 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence            3455567899999999999865 5699999999986533 5567889999866555 68999999999999999999999


Q ss_pred             ecCCCCHHHHhcC--CCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          585 YMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       585 y~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +| ..||+.+-..  ......+++.-.-.|...+..||.||.+..  .|||||+||+||||+..|.+||+|||++-.+
T Consensus       144 LM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqL  218 (361)
T KOG1006|consen  144 LM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQL  218 (361)
T ss_pred             HH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhH
Confidence            99 5677766421  123445777777788888999999999865  6999999999999999999999999998765

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.80  E-value=2.5e-19  Score=185.43  Aligned_cols=147  Identities=35%  Similarity=0.515  Sum_probs=129.5

Q ss_pred             cceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          510 FSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      |+..+.||+|++|.||+|+.. +++.+|+|.+....  ....+.+..|+.++++++|+||+++++++.+.+..++||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            556788999999999999875 48999999998643  334567889999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      + ++|.+++....  ..+++..+..++.+++.||+|||+++   |+||||+|+||++++++.+||+|||+++.+..
T Consensus        81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~  150 (282)
T cd07829          81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGI  150 (282)
T ss_pred             C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCC
Confidence            8 58999985421  46889999999999999999999987   99999999999999999999999999987644

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.80  E-value=4.4e-19  Score=186.77  Aligned_cols=149  Identities=34%  Similarity=0.514  Sum_probs=127.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      +.|+..+.||+|+||.||+|+.. +++.+|+|.+...   .....+++.+|+.++++++|+|++++++++......++||
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            34666789999999999999864 5789999998642   2223457889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+. +++.+++...  ...+++.++..++.+++.||.|||+.+   ++||||||+||+++.++.+||+|||++..+..
T Consensus        95 e~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  167 (308)
T cd06634          95 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (308)
T ss_pred             EccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence            9997 5777766432  345788999999999999999999987   99999999999999999999999999987643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.80  E-value=4e-19  Score=180.43  Aligned_cols=141  Identities=31%  Similarity=0.417  Sum_probs=126.0

Q ss_pred             eCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCH
Q 005825          516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL  591 (675)
Q Consensus       516 IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL  591 (675)
                      ||+|+||.||++... +++.+|+|.+.....   ...+.+..|+.++++++||||+++++.+..++..++||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999875 488999999875432   2456899999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          592 DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       592 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      .+++..   ...+++.....++.|+++||.|||+.+   ++|+||||+||++++++.++|+|||++.....
T Consensus        81 ~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~  145 (250)
T cd05123          81 FSHLSK---EGRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSS  145 (250)
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence            999843   335889999999999999999999987   99999999999999999999999999987744

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.79  E-value=2.9e-19  Score=182.87  Aligned_cols=150  Identities=29%  Similarity=0.438  Sum_probs=124.9

Q ss_pred             CcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCc-----CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQ-----SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~-----~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      +|.+.++||+|+||.||+++... +..+++|.++..     ......++..|+.++++++||||+++++++.+.+..++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            47788999999999999998643 445666655431     222344677899999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          583 LEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |||+++++|..++... .....+++..+..++.|++.||.|||+.+   ++|+||||+||++++ +.+||+|||+++.+.
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence            9999999999888532 23456899999999999999999999987   999999999999975 569999999998774


Q ss_pred             C
Q 005825          662 G  662 (675)
Q Consensus       662 ~  662 (675)
                      .
T Consensus       157 ~  157 (260)
T cd08222         157 G  157 (260)
T ss_pred             C
Confidence            3

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=1.5e-19  Score=179.08  Aligned_cols=161  Identities=24%  Similarity=0.367  Sum_probs=136.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|.++++||+|+|.+|..+++. +.+.+|+|++++.   ..+...-.+.|-.++... +||.+|-|..+++....+++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            468999999999999999999874 5788999999864   344566788888888776 69999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |.||++||+|--++   ++++.+++..+..+...|.-||.|||+++   ||.||||.+|+|||.+|++||+|+|+++.--
T Consensus       329 vieyv~ggdlmfhm---qrqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l  402 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL  402 (593)
T ss_pred             EEEEecCcceeeeh---hhhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCC
Confidence            99999999996555   45567888887778888999999999998   9999999999999999999999999998643


Q ss_pred             CCcccCCCCceecC
Q 005825          662 GDELQGNTKRIVGT  675 (675)
Q Consensus       662 ~~~~~~~~~~~~GT  675 (675)
                      ++.  ..|.+.+||
T Consensus       403 ~~g--d~tstfcgt  414 (593)
T KOG0695|consen  403 GPG--DTTSTFCGT  414 (593)
T ss_pred             CCC--cccccccCC
Confidence            222  235567776

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.79  E-value=4.4e-19  Score=189.71  Aligned_cols=149  Identities=29%  Similarity=0.424  Sum_probs=128.6

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe----
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE----  578 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~----  578 (675)
                      ..++|++.+.||+|++|.||+|+.. +++.||||++...  .....+.+..|+.++++++||||+++++++...+.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            4578999999999999999999875 5789999998753  22334567889999999999999999988766554    


Q ss_pred             --EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecc
Q 005825          579 --KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL  656 (675)
Q Consensus       579 --~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGl  656 (675)
                        .++|+||+ +++|.+++..    ..+++..+..++.|+++||+|||+.+   |+||||||+||++++++.+||+|||+
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~  164 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGL  164 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEccccc
Confidence              89999998 6799888843    35899999999999999999999987   99999999999999999999999999


Q ss_pred             ceecCC
Q 005825          657 ARMFGG  662 (675)
Q Consensus       657 a~~~~~  662 (675)
                      ++.+..
T Consensus       165 ~~~~~~  170 (343)
T cd07851         165 ARHTDD  170 (343)
T ss_pred             cccccc
Confidence            987643

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PRK10345 hypothetical protein; Provisional

Probab=99.78  E-value=1.9e-18  Score=170.05  Aligned_cols=137  Identities=20%  Similarity=0.280  Sum_probs=105.6

Q ss_pred             eeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-----CCCceeeEEEEEEeCC---eEE-EE
Q 005825          512 MECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-----QHRNLVRILGCCIEQG---EKI-LI  582 (675)
Q Consensus       512 ~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-----~H~nIv~l~g~~~~~~---~~~-lV  582 (675)
                      ..+.||+|+||.||. .-.++.. +||++........+.+.+|+.+++.+     .||||++++|++.++.   ..+ +|
T Consensus         6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            346899999999996 2223444 79988765445567899999999999     5799999999998864   333 78


Q ss_pred             EEe--cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHH-HHHHhcCCCceEecCCCCCCEEEcC----CCCeEEeeec
Q 005825          583 LEY--MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL-LYLHHYSRFRIIHRDLKASNVLLDR----DMNPKISDFG  655 (675)
Q Consensus       583 ~Ey--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L-~yLH~~~~~~iiHrDlkp~NILl~~----~~~~kl~DFG  655 (675)
                      +||  +++++|.+++.+.    .+++.  ..++.+++.++ +|||+++   |+||||||+|||++.    +..++|+||+
T Consensus        84 ~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~  154 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNI  154 (210)
T ss_pred             ecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence            999  5689999999431    24444  34567777777 9999998   999999999999974    3479999954


Q ss_pred             ccee
Q 005825          656 LARM  659 (675)
Q Consensus       656 la~~  659 (675)
                      .++.
T Consensus       155 G~~~  158 (210)
T PRK10345        155 GEST  158 (210)
T ss_pred             CCcc
Confidence            4443

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.78  E-value=7.3e-19  Score=200.54  Aligned_cols=155  Identities=34%  Similarity=0.516  Sum_probs=132.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc----C----CcEEEEEEecCcCc-cCHHHHHHHHHHHHhc-CCCceeeEEEEEEeC
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL----N----GEEVAVKRLSSQSG-QGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQ  576 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~----~----g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~  576 (675)
                      .++..+.+.||+|.||.|++|...    .    ...||||.++.... ...+.+..|+++|..+ +|+||+.++|+|.+.
T Consensus       295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~  374 (609)
T KOG0200|consen  295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQD  374 (609)
T ss_pred             hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccC
Confidence            344456679999999999999742    1    45799999986433 4567899999999998 699999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCC-----------Cc--ccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE
Q 005825          577 GEKILILEYMPNKSLDVFLFDPT-----------KK--RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL  643 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~-----------~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl  643 (675)
                      +..++|+||++.|+|.++|+...           ..  ..+...+.+.++.|||.||+||++..   +|||||.++|||+
T Consensus       375 ~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi  451 (609)
T KOG0200|consen  375 GPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAARNVLI  451 (609)
T ss_pred             CceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEe
Confidence            99999999999999999996543           00  23888999999999999999999887   9999999999999


Q ss_pred             cCCCCeEEeeeccceecCCCc
Q 005825          644 DRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       644 ~~~~~~kl~DFGla~~~~~~~  664 (675)
                      .++..+||+||||||.....+
T Consensus       452 ~~~~~~kIaDFGlar~~~~~~  472 (609)
T KOG0200|consen  452 TKNKVIKIADFGLARDHYNKD  472 (609)
T ss_pred             cCCCEEEEccccceeccCCCC
Confidence            999999999999999765443

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.78  E-value=1.4e-19  Score=175.40  Aligned_cols=150  Identities=25%  Similarity=0.374  Sum_probs=124.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc-CccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++.+.+..||.|+-|.|++++.+ .|..+|||.+.+. ..+..++++..++++.+-+ .|.||+.+|+|......++.||
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe  171 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME  171 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence            44555678999999999999875 4899999999864 3445677888888877765 8999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      .|.- -+++++.+  -.+++++.-.-++...+..||.||.+++  .|||||+||+|||+|+.|++|++|||++-.+-.
T Consensus       172 lMs~-C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd  244 (391)
T KOG0983|consen  172 LMST-CAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVD  244 (391)
T ss_pred             HHHH-HHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeec
Confidence            9843 45566543  2345778777789999999999999987  699999999999999999999999999976643

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.78  E-value=1e-18  Score=176.72  Aligned_cols=133  Identities=20%  Similarity=0.150  Sum_probs=115.0

Q ss_pred             cCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcC
Q 005825          519 GGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD  597 (675)
Q Consensus       519 G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~  597 (675)
                      |.+|.||+++.. +++.+|+|++....     .+..|...+....||||+++++++.+.+..++||||+++++|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            899999999864 58899999997532     234455555666799999999999999999999999999999998843


Q ss_pred             CCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          598 PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       598 ~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                         ...+++.....++.|++.||+|||+.+   |+||||||+||++++++.+|++|||+++.+..
T Consensus        79 ---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~  137 (237)
T cd05576          79 ---FLNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVED  137 (237)
T ss_pred             ---hcCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhcccc
Confidence               335889999999999999999999987   99999999999999999999999998876543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.78  E-value=1.8e-19  Score=176.79  Aligned_cols=149  Identities=26%  Similarity=0.337  Sum_probs=122.4

Q ss_pred             HhcCCccee-eeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEe----CC
Q 005825          505 AATENFSME-CKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIE----QG  577 (675)
Q Consensus       505 ~~~~~f~~~-~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~----~~  577 (675)
                      ..+++|++. ++||-|-.|+|..+.. .+++.+|+|+|...     ...++|+++--+. .|||||.+++++..    ..
T Consensus        58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk  132 (400)
T KOG0604|consen   58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRK  132 (400)
T ss_pred             cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence            456777765 5799999999999965 56899999998642     3345677765444 59999999999864    34


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEeee
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDF  654 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DF  654 (675)
                      .+++|||.|+||.|...+.+ .....+.+++...|..||+.|+.|||...   |.||||||+|+|...   +..+||+||
T Consensus       133 cLLiVmE~meGGeLfsriq~-~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDf  208 (400)
T KOG0604|consen  133 CLLIVMECMEGGELFSRIQD-RGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDF  208 (400)
T ss_pred             eeEeeeecccchHHHHHHHH-cccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEeccc
Confidence            57899999999999998854 34456899999999999999999999987   999999999999964   557999999


Q ss_pred             ccceecCC
Q 005825          655 GLARMFGG  662 (675)
Q Consensus       655 Gla~~~~~  662 (675)
                      |+|+.-.+
T Consensus       209 GFAK~t~~  216 (400)
T KOG0604|consen  209 GFAKETQE  216 (400)
T ss_pred             ccccccCC
Confidence            99997654

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.78  E-value=1.2e-19  Score=171.70  Aligned_cols=145  Identities=25%  Similarity=0.457  Sum_probs=125.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEE-EcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCC--eEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQG--EKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~--~~~l  581 (675)
                      ..++|++.+++|+|.+++||.|. ..+.+.++||.+++   ...+.+.+|++||..+. ||||++|++...++.  ...|
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            45789999999999999999997 45688999999985   34467889999999998 999999999987654  5689


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC-CCeEEeeeccceec
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLARMF  660 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DFGla~~~  660 (675)
                      |+||+++.+...+.      ..+...+...++.+++.||.|+|+.|   |+|||+||.|+++|.. ..++|+|+|||..+
T Consensus       113 iFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY  183 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY  183 (338)
T ss_pred             HhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhc
Confidence            99999999887665      34677788889999999999999998   9999999999999865 56999999999987


Q ss_pred             CC
Q 005825          661 GG  662 (675)
Q Consensus       661 ~~  662 (675)
                      -+
T Consensus       184 Hp  185 (338)
T KOG0668|consen  184 HP  185 (338)
T ss_pred             CC
Confidence            43

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.77  E-value=4.5e-18  Score=169.30  Aligned_cols=149  Identities=38%  Similarity=0.543  Sum_probs=132.5

Q ss_pred             cceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCcc-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          510 FSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      |.+.+.||+|++|.||++...+ ++.+|+|.+...... ..+.+..|++.+++++|+|++++++++......++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            4567899999999999998865 889999999865444 57789999999999999999999999999899999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++|.+++.....  .+++.....++.+++.+|.|||+.+   ++|+||+|+||+++.++.++|+|||++..+...
T Consensus        81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221       81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence            9999999853221  1788999999999999999999986   999999999999999999999999999988544

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.77  E-value=1.6e-20  Score=179.77  Aligned_cols=149  Identities=30%  Similarity=0.548  Sum_probs=120.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecC--cCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--------
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--------  576 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--------  576 (675)
                      +.|.-..+||+|.||+||+|+.. +++.||+|++--  +....-..-.+|+++|..++|+|++.++..|...        
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            45555679999999999999864 478899887542  1222234457899999999999999999988543        


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecc
Q 005825          577 GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL  656 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGl  656 (675)
                      ...++|+.+++. +|.-+|..  ....++..++.++..++..||.|+|...   |+|||+||+|+|++.++.+||+|||+
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGl  170 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGL  170 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccc
Confidence            247999999964 66666633  3345788889999999999999999876   99999999999999999999999999


Q ss_pred             ceecCC
Q 005825          657 ARMFGG  662 (675)
Q Consensus       657 a~~~~~  662 (675)
                      ||.+.-
T Consensus       171 ar~fs~  176 (376)
T KOG0669|consen  171 ARAFST  176 (376)
T ss_pred             ccceec
Confidence            988743

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.77  E-value=1.7e-18  Score=195.61  Aligned_cols=149  Identities=24%  Similarity=0.315  Sum_probs=106.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-C----CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEE------EE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-N----GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC------CI  574 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~----g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~------~~  574 (675)
                      ..++|++.++||+|+||.||+|++. +    +..||||++.....  .+.+..|  .+....+.+++.++..      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            4578999999999999999999874 4    68999999864221  1212221  1122222222222211      24


Q ss_pred             eCCeEEEEEEecCCCCHHHHhcCCCCc-----------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCC
Q 005825          575 EQGEKILILEYMPNKSLDVFLFDPTKK-----------------RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLK  637 (675)
Q Consensus       575 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk  637 (675)
                      +..+.++||||+++++|.+++......                 ..........|+.||+.||+|||+++   |+|||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence            566899999999999999988542110                 01112335578999999999999987   9999999


Q ss_pred             CCCEEEcC-CCCeEEeeeccceecC
Q 005825          638 ASNVLLDR-DMNPKISDFGLARMFG  661 (675)
Q Consensus       638 p~NILl~~-~~~~kl~DFGla~~~~  661 (675)
                      |+|||+++ ++.+||+|||+|+.+.
T Consensus       283 P~NILl~~~~~~~KL~DFGlA~~l~  307 (566)
T PLN03225        283 PQNIIFSEGSGSFKIIDLGAAADLR  307 (566)
T ss_pred             HHHEEEeCCCCcEEEEeCCCccccc
Confidence            99999986 5799999999998663

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.77  E-value=1.2e-18  Score=183.42  Aligned_cols=163  Identities=23%  Similarity=0.347  Sum_probs=135.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecC--cCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ....|+++++||+||-++||++...+.+.+|+|++..  .+.+....|.+|+.+|.+|+ |.+||+|++|-..++.+|||
T Consensus       359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv  438 (677)
T KOG0596|consen  359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV  438 (677)
T ss_pred             CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence            3467888899999999999999998888999998763  35667889999999999996 99999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||= ..+|.++|.... .....| .+..+..|+++|+.++|+++   |||.||||.|+|+-+ |.+||+|||+|.-+..
T Consensus       439 mE~G-d~DL~kiL~k~~-~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~  511 (677)
T KOG0596|consen  439 MECG-DIDLNKILKKKK-SIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQP  511 (677)
T ss_pred             eecc-cccHHHHHHhcc-CCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccCc
Confidence            9974 678999995432 223334 56678999999999999998   999999999999965 5899999999999877


Q ss_pred             CcccCCCCceecC
Q 005825          663 DELQGNTKRIVGT  675 (675)
Q Consensus       663 ~~~~~~~~~~~GT  675 (675)
                      +.+...-..-+||
T Consensus       512 DTTsI~kdsQvGT  524 (677)
T KOG0596|consen  512 DTTSIVKDSQVGT  524 (677)
T ss_pred             cccceeeccccCc
Confidence            7654333334555

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.77  E-value=2.8e-18  Score=163.70  Aligned_cols=151  Identities=25%  Similarity=0.380  Sum_probs=126.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEE-EcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCC-CceeeEEEEEEeCCeEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH-RNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H-~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..+.|.+.++||.|+||.+|.|. ..+|++||||.-+...  ....+.-|.++...++| ..|.++..+..++..-.+||
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            45789999999999999999996 4679999999876533  23456778888888875 67888888888999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DFGla~~~  660 (675)
                      |++ |.||++++.-  ..+.++-++.+.++.|++.-++|+|.++   .|||||||+|+|..-   -..+.++|||||+.+
T Consensus        91 dLL-GPsLEdLfnf--C~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky  164 (341)
T KOG1163|consen   91 DLL-GPSLEDLFNF--CSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY  164 (341)
T ss_pred             ecc-CccHHHHHHH--HhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhh
Confidence            988 8999998742  3445788899999999999999999998   999999999999854   346899999999988


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      -...
T Consensus       165 ~d~~  168 (341)
T KOG1163|consen  165 RDIR  168 (341)
T ss_pred             cccc
Confidence            5443

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=2.9e-20  Score=179.77  Aligned_cols=151  Identities=26%  Similarity=0.418  Sum_probs=123.7

Q ss_pred             eeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-----eEEEEEE
Q 005825          513 ECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-----EKILILE  584 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-----~~~lV~E  584 (675)
                      .+.||-|+||.||...+ ++|+.||.|++..-  .-...+++.+|+++|.-++|.|+...++..+-..     +.|+|+|
T Consensus        58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE  137 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE  137 (449)
T ss_pred             CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence            36799999999999987 46999999998642  2223567889999999999999999988876543     5678888


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      +| ..+|.+++-   ....++.....-+..||++||+|||+.+   |.||||||.|.|++.+..+||+||||||.-+.++
T Consensus       138 Lm-QSDLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  138 LM-QSDLHKIIV---SPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD  210 (449)
T ss_pred             HH-Hhhhhheec---cCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccchhh
Confidence            88 457777773   3345666677778999999999999987   9999999999999999999999999999877666


Q ss_pred             ccCCCC
Q 005825          665 LQGNTK  670 (675)
Q Consensus       665 ~~~~~~  670 (675)
                      ...+|.
T Consensus       211 ~~hMTq  216 (449)
T KOG0664|consen  211 RLNMTH  216 (449)
T ss_pred             hhhhHH
Confidence            554443

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=6.4e-20  Score=190.76  Aligned_cols=159  Identities=25%  Similarity=0.303  Sum_probs=136.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCc-EEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~-~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .+++....||-|+||.|=+++..... .+|+|.+++.   .....+.+..|-.||...+.|.||+|+-.|.+.+..|+.|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm  499 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM  499 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence            45556678999999999998875433 3888988764   3345567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |-+-||.|-..|.   .++.++..+..-++..+.+|++|||.++   ||.|||||+|.+||.+|-+||.|||+|+.++..
T Consensus       500 EaClGGElWTiLr---dRg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g  573 (732)
T KOG0614|consen  500 EACLGGELWTILR---DRGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG  573 (732)
T ss_pred             HhhcCchhhhhhh---hcCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence            9999999999994   3456777777788889999999999998   999999999999999999999999999999766


Q ss_pred             cccCCCCceecC
Q 005825          664 ELQGNTKRIVGT  675 (675)
Q Consensus       664 ~~~~~~~~~~GT  675 (675)
                      +.   |-+.+||
T Consensus       574 ~K---TwTFcGT  582 (732)
T KOG0614|consen  574 RK---TWTFCGT  582 (732)
T ss_pred             Cc---eeeecCC
Confidence            53   5567887

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.75  E-value=1.1e-17  Score=165.11  Aligned_cols=143  Identities=12%  Similarity=0.117  Sum_probs=117.1

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHH---H------HHHHHHHHHhcCCCceeeEEEEEEe
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE---E------FKNEMLLIAKLQHRNLVRILGCCIE  575 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~---~------f~~E~~il~~l~H~nIv~l~g~~~~  575 (675)
                      ...++|+..+.||.|+||.||+... ++..+|||.+.+......+   .      +.+|+..+.++.|++|..+..++..
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            3568999999999999999999766 5778999999764333222   2      6899999999999999999888664


Q ss_pred             C--------CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC
Q 005825          576 Q--------GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM  647 (675)
Q Consensus       576 ~--------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~  647 (675)
                      .        ...+|||||++|.+|.++..       ++.    ....+++.+|..+|+.+   ++|||+||+||++++++
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g  172 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG  172 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC
Confidence            3        35789999999999987641       222    24558999999999988   99999999999999988


Q ss_pred             CeEEeeeccceecCCC
Q 005825          648 NPKISDFGLARMFGGD  663 (675)
Q Consensus       648 ~~kl~DFGla~~~~~~  663 (675)
                       ++|+|||..+....+
T Consensus       173 -i~liDfg~~~~~~e~  187 (232)
T PRK10359        173 -LRIIDLSGKRCTAQR  187 (232)
T ss_pred             -EEEEECCCcccccch
Confidence             999999999877433

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.75  E-value=3.8e-17  Score=159.80  Aligned_cols=143  Identities=38%  Similarity=0.632  Sum_probs=126.9

Q ss_pred             eCCcCceeEEEEEEcC-CcEEEEEEecCcCcc-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCHHH
Q 005825          516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDV  593 (675)
Q Consensus       516 IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~  593 (675)
                      ||+|++|.||+++..+ ++++++|++...... ..+.+.+|+..+++++|++|+++++++......+++||++++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999998864 899999999864332 35789999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-CCCeEEeeeccceecCCC
Q 005825          594 FLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-DMNPKISDFGLARMFGGD  663 (675)
Q Consensus       594 ~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DFGla~~~~~~  663 (675)
                      ++....  ..+++..+..++.+++++|.|||+.+   ++|+||+|.||+++. ++.++|+|||.+......
T Consensus        81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~  146 (215)
T cd00180          81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD  146 (215)
T ss_pred             HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCC
Confidence            984321  35788999999999999999999987   999999999999999 899999999999877543

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00090 RIO RIO-like kinase

Probab=99.75  E-value=9.3e-18  Score=169.02  Aligned_cols=149  Identities=16%  Similarity=0.139  Sum_probs=115.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEE--EcCCcEEEEEEecCcCcc------------------------CHHHHHHHHHHHH
Q 005825          506 ATENFSMECKLGEGGFGPVYKGR--LLNGEEVAVKRLSSQSGQ------------------------GLEEFKNEMLLIA  559 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~--~~~g~~vAvK~l~~~~~~------------------------~~~~f~~E~~il~  559 (675)
                      ....|++.+.||+|+||.||+|.  ..+|+.||||.++.....                        ....+..|+.++.
T Consensus        26 ~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~  105 (237)
T smart00090       26 RGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQ  105 (237)
T ss_pred             cCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHH
Confidence            33468888999999999999998  567999999998743210                        0123568999999


Q ss_pred             hcCCC--ceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCC
Q 005825          560 KLQHR--NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLK  637 (675)
Q Consensus       560 ~l~H~--nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk  637 (675)
                      ++.|.  .+.++++.    ...++||||+++.+|.....   ....+...+...++.||+.+|.+||+++  +|+|||||
T Consensus       106 ~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dik  176 (237)
T smart00090      106 RLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL---KDVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLS  176 (237)
T ss_pred             HHHhcCCCCCeeeEe----cCceEEEEEecCCccccccc---ccCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCC
Confidence            99753  34455543    23589999999988876542   1223455566789999999999999876  49999999


Q ss_pred             CCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          638 ASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       638 p~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+||+++ ++.++|+|||+|+..+...
T Consensus       177 p~NIli~-~~~i~LiDFg~a~~~~~~~  202 (237)
T smart00090      177 EYNILVH-DGKVVIIDVSQSVELDHPM  202 (237)
T ss_pred             hhhEEEE-CCCEEEEEChhhhccCCcc
Confidence            9999999 8899999999999776544

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.74  E-value=1.6e-17  Score=164.80  Aligned_cols=136  Identities=21%  Similarity=0.300  Sum_probs=114.7

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCcc--------CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ--------GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~--------~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +.||+|++|.||+|+. .+..++||+.......        ....+..|+.++..++|++|.....++...+..++||||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5799999999999987 6778999986543211        124578899999999999988877777778888999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++|++|.+++...      .+ .+..++.+++.+|.+||+.+   ++|+|++|.|||++ ++.++|+|||+++...
T Consensus        81 ~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~  145 (211)
T PRK14879         81 IEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEFSK  145 (211)
T ss_pred             eCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence            9999999988421      12 77889999999999999987   99999999999999 7899999999998643

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.74  E-value=3e-17  Score=158.68  Aligned_cols=133  Identities=21%  Similarity=0.219  Sum_probs=106.6

Q ss_pred             eeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCcc----CHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEEEec
Q 005825          512 MECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ----GLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       512 ~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~----~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      ....|++|+||+||.+.- .+.+++.+.++....-    ....|.+|+++|++++ |+++++++++    +..+++|||+
T Consensus         6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            457899999999997765 6778888887753221    1125889999999995 5889999886    4579999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCC-CCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDL-KASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDl-kp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +|.+|...+.    .      ....++.+++++|.++|.++   |+|||| ||+|||+++++.++|+|||+|....+
T Consensus        81 ~G~~L~~~~~----~------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274         81 AGAAMYQRPP----R------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             cCccHHhhhh----h------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence            9999865431    0      11346788999999999998   999999 79999999999999999999996643

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.74  E-value=4.5e-19  Score=190.14  Aligned_cols=150  Identities=27%  Similarity=0.461  Sum_probs=136.4

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ..++|.+...+|.|++|.|||++. ..++..|||.++........-.+.|+-+++..+|||||.++|.+...+..++.||
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            346888889999999999999986 4589999999998777778888999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |+.+|+|.+.-+   ..+.+++.++..+++...+||+|||..+   -+|||||-.|||+++.+.+|++|||.+..++
T Consensus        93 ycgggslQdiy~---~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqit  163 (829)
T KOG0576|consen   93 YCGGGSLQDIYH---VTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQIT  163 (829)
T ss_pred             ecCCCcccceee---ecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhh
Confidence            999999988763   3467888899999999999999999998   8999999999999999999999999987664

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.73  E-value=2.1e-17  Score=162.41  Aligned_cols=146  Identities=18%  Similarity=0.175  Sum_probs=113.7

Q ss_pred             HHHHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCcc----------------------CHHHHHHHHHHHH
Q 005825          502 SVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ----------------------GLEEFKNEMLLIA  559 (675)
Q Consensus       502 ~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~----------------------~~~~f~~E~~il~  559 (675)
                      ++......|.+.+.||+|+||.||++...+|+.||||++......                      ....+..|..++.
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   88 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK   88 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence            344444457888999999999999999888999999987642210                      0123667889999


Q ss_pred             hcCCC--ceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCC
Q 005825          560 KLQHR--NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLK  637 (675)
Q Consensus       560 ~l~H~--nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk  637 (675)
                      ++.|+  .+.+.++.    ...++||||+++++|......         .....++.+++.++.++|+.+   |+|||||
T Consensus        89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~  152 (198)
T cd05144          89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHG---IIHGDLS  152 (198)
T ss_pred             HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCC---CCcCCCC
Confidence            99887  45555442    456899999999998765410         234568889999999999987   9999999


Q ss_pred             CCCEEEcCCCCeEEeeeccceecCCC
Q 005825          638 ASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       638 p~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |+||++++++.+||+|||+|..+..+
T Consensus       153 p~Nill~~~~~~~liDfg~~~~~~~~  178 (198)
T cd05144         153 EFNILVDDDEKIYIIDWPQMVSTDHP  178 (198)
T ss_pred             cccEEEcCCCcEEEEECCccccCCCc
Confidence            99999999999999999999877554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.73  E-value=4.8e-18  Score=186.91  Aligned_cols=148  Identities=33%  Similarity=0.480  Sum_probs=117.4

Q ss_pred             cceeeeeCCcCcee-EEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          510 FSMECKLGEGGFGP-VYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       510 f~~~~~IG~G~fG~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      |...+.+|.|+-|+ ||+|.+ ++++||||++-.   ....-.++|+..|..- +||||||+++.-.+...+||..|.+ 
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-  585 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-  585 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee-CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence            34446789998765 699988 678999999864   2334567899999887 5999999999988999999999998 


Q ss_pred             CCCHHHHhcCCCCc-ccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---C--CCeEEeeeccceecC
Q 005825          588 NKSLDVFLFDPTKK-RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---D--MNPKISDFGLARMFG  661 (675)
Q Consensus       588 ~gsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~--~~~kl~DFGla~~~~  661 (675)
                      ..+|++++...... ....-...+.+..|++.||++||+.+   ||||||||+||||+.   +  ..++|+|||+++.+.
T Consensus       586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence            67999999542111 11111345678899999999999976   999999999999976   2  579999999999997


Q ss_pred             CCcc
Q 005825          662 GDEL  665 (675)
Q Consensus       662 ~~~~  665 (675)
                      .+..
T Consensus       663 ~~~s  666 (903)
T KOG1027|consen  663 GGKS  666 (903)
T ss_pred             CCcc
Confidence            7654

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.72  E-value=4.3e-17  Score=163.75  Aligned_cols=138  Identities=34%  Similarity=0.470  Sum_probs=123.7

Q ss_pred             CceeEEEEEEcC-CcEEEEEEecCcCccC-HHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcC
Q 005825          520 GFGPVYKGRLLN-GEEVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD  597 (675)
Q Consensus       520 ~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~-~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~  597 (675)
                      +||.||+|+..+ ++.+|+|++....... .+.+..|++.+++++|+||+++++.+......+++|||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            589999998764 8999999998654444 68999999999999999999999999999999999999999999999853


Q ss_pred             CCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          598 PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       598 ~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      .   ..+++..+..++.+++++|.|||+.+   ++|+||+|+||++++++.++|+|||++..+...
T Consensus        81 ~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~  140 (244)
T smart00220       81 R---GRLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPG  140 (244)
T ss_pred             c---cCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeeccc
Confidence            2   22788999999999999999999987   999999999999999999999999999987553

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.72  E-value=2.8e-17  Score=185.78  Aligned_cols=141  Identities=22%  Similarity=0.315  Sum_probs=114.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCc-------cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG-------QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-------~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      ...|...++||+|+||.||+|.+.+...++.+++.+...       ...+++.+|++++.+++|++++....++......
T Consensus       332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~  411 (535)
T PRK09605        332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK  411 (535)
T ss_pred             ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence            344466789999999999999875544333322322111       1235688999999999999999988888887888


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++.           ....++.+++++|.|||+.+   ++||||||+|||+ +++.++|+|||+|+.
T Consensus       412 ~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        412 TIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             EEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence            99999999999998873           35678999999999999987   9999999999999 678999999999987


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      ...
T Consensus       477 ~~~  479 (535)
T PRK09605        477 SDL  479 (535)
T ss_pred             CCc
Confidence            643

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.72  E-value=4.5e-17  Score=160.11  Aligned_cols=133  Identities=22%  Similarity=0.337  Sum_probs=108.4

Q ss_pred             eeCCcCceeEEEEEEcCCcEEEEEEecCcCc--c------CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG--Q------GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~--~------~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .||+|+||.||+|.. ++..+++|.......  .      ..+++..|+.++..++|+++.....++...+..++||||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            489999999999985 568899998654221  1      1356778999999999887665555666677789999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +|++|.+++...   ..       .++.+++++|.+||+.+   ++|+|++|+||+++ ++.++++|||+++....
T Consensus        80 ~g~~l~~~~~~~---~~-------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~  141 (199)
T TIGR03724        80 EGKPLKDVIEEG---ND-------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDE  141 (199)
T ss_pred             CCccHHHHHhhc---HH-------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcCCCc
Confidence            999999887321   10       78899999999999987   99999999999999 88999999999987643

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.72  E-value=6.5e-18  Score=163.75  Aligned_cols=147  Identities=21%  Similarity=0.382  Sum_probs=121.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEE-EEeCCeEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGC-CIEQGEKILIL  583 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~-~~~~~~~~lV~  583 (675)
                      .+.|.+.+.||+|.||.+-+++.+. ...+++|.+.+ .....++|.+|...--.| .|.||+.-++. |+..+..++++
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~-p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR-PQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc-chhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            3578888999999999999998754 77899999875 234568899998765555 58999876654 56777888999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc--CCCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD--RDMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~--~~~~~kl~DFGla~~~~  661 (675)
                      ||+|.|+|.+-+-    ...+.+.....++.|++.||.|+|++.   ++|||||.+|||+-  +...+||+|||+.+..+
T Consensus       102 E~aP~gdL~snv~----~~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  102 EFAPRGDLRSNVE----AAGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             ccCccchhhhhcC----cccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccC
Confidence            9999999988772    234667778889999999999999987   99999999999993  34589999999998754

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.72  E-value=3.7e-17  Score=162.80  Aligned_cols=151  Identities=25%  Similarity=0.378  Sum_probs=126.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEE-EcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .-+|++.++||+|+||+++.|+ +-++++||||.-..++  ..-+++.|....+.|. .+.|..++-+..++.+-.||+|
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            4589999999999999999996 5689999999765432  2345666777776664 6899999999899999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC-----CCeEEeeecccee
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD-----MNPKISDFGLARM  659 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~-----~~~kl~DFGla~~  659 (675)
                      ++ |.||++++-  -..+.++.++...||.|+..-++|+|++.   +|.|||||+|+||...     ..+.|+|||||+.
T Consensus       105 LL-GPSLEDLFD--~CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~  178 (449)
T KOG1165|consen  105 LL-GPSLEDLFD--LCGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE  178 (449)
T ss_pred             hh-CcCHHHHHH--HhcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence            88 899999873  34567899999999999999999999998   9999999999999653     4589999999998


Q ss_pred             cCCCcc
Q 005825          660 FGGDEL  665 (675)
Q Consensus       660 ~~~~~~  665 (675)
                      +-..++
T Consensus       179 YrDp~T  184 (449)
T KOG1165|consen  179 YRDPKT  184 (449)
T ss_pred             hcCccc
Confidence            865544

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.70  E-value=1.5e-17  Score=168.54  Aligned_cols=162  Identities=25%  Similarity=0.401  Sum_probs=138.0

Q ss_pred             cHHHHHHhcCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEE
Q 005825          499 SLASVAAATENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILG  571 (675)
Q Consensus       499 ~~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g  571 (675)
                      ...++.....+++...++.+|.||.||+|.++      +.+.|-||.++.. ++.....+..|.-++..+.|||+..+.+
T Consensus       275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~  354 (563)
T KOG1024|consen  275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG  354 (563)
T ss_pred             hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence            34456666778888899999999999999553      3567889988865 3445678999999999999999999999


Q ss_pred             EEEeC-CeEEEEEEecCCCCHHHHhc-----CCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC
Q 005825          572 CCIEQ-GEKILILEYMPNKSLDVFLF-----DPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR  645 (675)
Q Consensus       572 ~~~~~-~~~~lV~Ey~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~  645 (675)
                      ++.+. ...+++|.++.-|+|..||.     +....+.+.-.+...++.|++.|++|||.++   |||.||.++|+++|+
T Consensus       355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd  431 (563)
T KOG1024|consen  355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDD  431 (563)
T ss_pred             EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehh
Confidence            99765 46789999999999999997     4445566777888999999999999999988   999999999999999


Q ss_pred             CCCeEEeeeccceecCCC
Q 005825          646 DMNPKISDFGLARMFGGD  663 (675)
Q Consensus       646 ~~~~kl~DFGla~~~~~~  663 (675)
                      ..++||+|=.|+|.+-+.
T Consensus       432 ~LqVkltDsaLSRDLFP~  449 (563)
T KOG1024|consen  432 QLQVKLTDSALSRDLFPG  449 (563)
T ss_pred             heeEEeccchhccccCcc
Confidence            999999999999977443

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.70  E-value=2.7e-17  Score=177.29  Aligned_cols=147  Identities=24%  Similarity=0.338  Sum_probs=123.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .+..|.+...+|+|+|+.|-.+.. .+++..+||++.+..    ..-.+|+.++.+. +||||+++.+.+.++.+.++||
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~  395 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM  395 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence            467888888999999999999875 568899999998642    2334567665555 6999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE-cCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL-DRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl-~~~~~~kl~DFGla~~~~~  662 (675)
                      |++.++-+...+..   .+... .++..|+.+|+.|+.|||+++   |+||||||+|||+ ++.++++|+|||.++.+.+
T Consensus       396 e~l~g~ell~ri~~---~~~~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~  468 (612)
T KOG0603|consen  396 ELLDGGELLRRIRS---KPEFC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELER  468 (612)
T ss_pred             hhccccHHHHHHHh---cchhH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence            99999988777632   22222 677789999999999999988   9999999999999 5999999999999998865


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      +
T Consensus       469 ~  469 (612)
T KOG0603|consen  469 S  469 (612)
T ss_pred             h
Confidence            5

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.68  E-value=3e-16  Score=166.14  Aligned_cols=145  Identities=25%  Similarity=0.354  Sum_probs=122.0

Q ss_pred             CcceeeeeCCcCceeEEEEEEcCC--cEEEEEEecCcCccCHHHHHHHHHHHHhcCC----CceeeEEEEE-EeCCeEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLLNG--EEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH----RNLVRILGCC-IEQGEKIL  581 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~~g--~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H----~nIv~l~g~~-~~~~~~~l  581 (675)
                      +|.+.++||+|+||.||++.....  ..+|+|............+..|+.++..+.+    +++.++++.. ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            899999999999999999987553  5788888765433333378889999998873    5888898888 47778899


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC-----CCeEEeeecc
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD-----MNPKISDFGL  656 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~-----~~~kl~DFGl  656 (675)
                      ||+.+ |.+|.++..... .+.++..+.+.|+.|++.+|++||+.+   ++||||||+|+++...     ..+.|.|||+
T Consensus        99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl  173 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL  173 (322)
T ss_pred             EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence            99976 999999774433 567899999999999999999999998   9999999999999764     4699999999


Q ss_pred             ce
Q 005825          657 AR  658 (675)
Q Consensus       657 a~  658 (675)
                      |+
T Consensus       174 ar  175 (322)
T KOG1164|consen  174 AR  175 (322)
T ss_pred             Cc
Confidence            99

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.66  E-value=1.3e-16  Score=164.08  Aligned_cols=149  Identities=25%  Similarity=0.456  Sum_probs=129.4

Q ss_pred             HHHHhcCCcceeeeeCCcCceeEEEEEEc----CCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeC
Q 005825          502 SVAAATENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQ  576 (675)
Q Consensus       502 ~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~  576 (675)
                      .+....+.|...++||+|.|++||++.+.    ..+.||+|.+...  +...++.+|+++|..+. |.||+++.+++...
T Consensus        30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn  107 (418)
T KOG1167|consen   30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNN  107 (418)
T ss_pred             hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence            34566788999999999999999999753    3678999999753  34467899999999995 89999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-CCCeEEeeec
Q 005825          577 GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-DMNPKISDFG  655 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DFG  655 (675)
                      +...+|+||++.....++...      ++..+...++..+..||+++|+++   ||||||||.|+|.+. .+.-.|.|||
T Consensus       108 d~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFg  178 (418)
T KOG1167|consen  108 DQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFG  178 (418)
T ss_pred             CeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEech
Confidence            999999999999999998843      567788889999999999999998   999999999999975 5678999999


Q ss_pred             cceecC
Q 005825          656 LARMFG  661 (675)
Q Consensus       656 la~~~~  661 (675)
                      ||....
T Consensus       179 LA~~~d  184 (418)
T KOG1167|consen  179 LAQRYD  184 (418)
T ss_pred             hHHHHH
Confidence            998543

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.65  E-value=1.2e-15  Score=141.71  Aligned_cols=137  Identities=22%  Similarity=0.228  Sum_probs=116.2

Q ss_pred             eeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCC--CceeeEEEEEEeCCeEEEEEEecCCC
Q 005825          512 MECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH--RNLVRILGCCIEQGEKILILEYMPNK  589 (675)
Q Consensus       512 ~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H--~nIv~l~g~~~~~~~~~lV~Ey~~~g  589 (675)
                      +.+.||+|.++.||+++..+ ..+++|.......  ...+..|+.++..++|  +++++++++...++..+++|||++++
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            34789999999999999854 7899999875433  5678999999999976  58999999988888899999999988


Q ss_pred             CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          590 SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       590 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      .+..+          +......++.+++++|++||.....+++|+|++|+||++++.+.+++.|||+++...
T Consensus        79 ~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~  140 (155)
T cd05120          79 TLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP  140 (155)
T ss_pred             ecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence            76533          456667789999999999998755569999999999999999999999999998643

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.64  E-value=9.1e-16  Score=149.17  Aligned_cols=140  Identities=19%  Similarity=0.232  Sum_probs=100.5

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCcCcc--CHHHH----------------------HHHHHHHHhcCCC--ce
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ--GLEEF----------------------KNEMLLIAKLQHR--NL  566 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~--~~~~f----------------------~~E~~il~~l~H~--nI  566 (675)
                      .+.||+|+||.||+|...++++||||+++.....  ....+                      ..|...+.++.+.  .+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            3679999999999999888999999988753211  11111                      3566666666543  34


Q ss_pred             eeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHh-cCCCceEecCCCCCCEEEcC
Q 005825          567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH-YSRFRIIHRDLKASNVLLDR  645 (675)
Q Consensus       567 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlkp~NILl~~  645 (675)
                      .+.+++    ...++||||++++.+........   ... .+...++.+++.++.++|. .+   |+|+||||+||+++ 
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~---~~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-  149 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV---RLL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-  149 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhh---hhc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-
Confidence            455443    24689999999955432111100   011 4567889999999999998 66   99999999999999 


Q ss_pred             CCCeEEeeeccceecCCCc
Q 005825          646 DMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       646 ~~~~kl~DFGla~~~~~~~  664 (675)
                      ++.++|+|||.|+.+..++
T Consensus       150 ~~~~~liDfg~a~~~~~~~  168 (187)
T cd05119         150 DGKVYIIDVPQAVEIDHPN  168 (187)
T ss_pred             CCcEEEEECcccccccCcc
Confidence            8999999999998775543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.64  E-value=5e-16  Score=157.75  Aligned_cols=154  Identities=23%  Similarity=0.252  Sum_probs=127.1

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcC-C-Cc----eeeEEEEEEeCC
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-H-RN----LVRILGCCIEQG  577 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H-~n----Iv~l~g~~~~~~  577 (675)
                      ..+++|.+..++|+|.||.|.++.... +..||||+++. .....++-+.|+++|.++. + |+    +|.+.+++.-.+
T Consensus        86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~-V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg  164 (415)
T KOG0671|consen   86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN-VDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG  164 (415)
T ss_pred             ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHH-HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence            347899999999999999999997643 78999999985 3344566778999999994 2 32    788888898899


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC------------
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR------------  645 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~------------  645 (675)
                      +.++|+|.| |.|+.++|... ...+++-.....|+.|++++++|||+..   ++|-||||+|||+-+            
T Consensus       165 hiCivfell-G~S~~dFlk~N-~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~  239 (415)
T KOG0671|consen  165 HICIVFELL-GLSTFDFLKEN-NYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKK  239 (415)
T ss_pred             ceEEEEecc-ChhHHHHhccC-CccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCc
Confidence            999999988 67999999653 4456888999999999999999999987   999999999999832            


Q ss_pred             --------CCCeEEeeeccceecCCCc
Q 005825          646 --------DMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       646 --------~~~~kl~DFGla~~~~~~~  664 (675)
                              +..+||+|||-|..-.+..
T Consensus       240 ~~~~r~~ks~~I~vIDFGsAtf~~e~h  266 (415)
T KOG0671|consen  240 VCFIRPLKSTAIKVIDFGSATFDHEHH  266 (415)
T ss_pred             cceeccCCCcceEEEecCCcceeccCc
Confidence                    2358999999999765444

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.63  E-value=2.4e-16  Score=156.55  Aligned_cols=147  Identities=30%  Similarity=0.398  Sum_probs=118.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~------  577 (675)
                      ..+|..+..+|.|.- .|..+.+ ..+++||+|++...  .....++..+|..++..+.|+||++++.++.-..      
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~   94 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ   94 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence            456666777888877 5555543 35889999988643  2334567788999999999999999999996443      


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      +.++||||| ..+|...+.     ..++-.+...|..|++.|++|||+.+   |+||||||+||++..+..+||.|||+|
T Consensus        95 e~y~v~e~m-~~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~a  165 (369)
T KOG0665|consen   95 EVYLVMELM-DANLCQVIL-----MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLA  165 (369)
T ss_pred             hHHHHHHhh-hhHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhh
Confidence            579999999 457777764     23666778899999999999999988   999999999999999999999999999


Q ss_pred             eecCCC
Q 005825          658 RMFGGD  663 (675)
Q Consensus       658 ~~~~~~  663 (675)
                      +.-+.+
T Consensus       166 r~e~~~  171 (369)
T KOG0665|consen  166 RTEDTD  171 (369)
T ss_pred             cccCcc
Confidence            976444

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.62  E-value=5e-16  Score=123.04  Aligned_cols=66  Identities=48%  Similarity=1.098  Sum_probs=57.9

Q ss_pred             CCCCCceEEeeccCCCCccceeccccCCHHHHHHHHhccCceeeeecccccCCceeEEeccccccc
Q 005825          337 CIKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDA  402 (675)
Q Consensus       337 C~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~A~~~~~~~~~~~C~~w~~~l~~~  402 (675)
                      |+.+|+|+++++|++|++....++.+.++++|++.||+||||+||+|.+..++++|++|+++|+|+
T Consensus         1 C~~~d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~~~~~C~lW~~~L~d~   66 (66)
T PF08276_consen    1 CGSGDGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLSGGGGCLLWYGDLVDL   66 (66)
T ss_pred             CcCCCEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccCCCCEEEEEcCEeecC
Confidence            545799999999999999877666678999999999999999999998655578899999999874

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.61  E-value=9.5e-16  Score=160.36  Aligned_cols=155  Identities=21%  Similarity=0.296  Sum_probs=131.8

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcC------CCceeeEEEEEEeCCe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ------HRNLVRILGCCIEQGE  578 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~------H~nIv~l~g~~~~~~~  578 (675)
                      -...|.+....|+|-|+.|.+|.... |+.||||+|..+. ...+.=+.|++||++|.      .-+.++|+..|.+.++
T Consensus       430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH  508 (752)
T KOG0670|consen  430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH  508 (752)
T ss_pred             hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence            45789998999999999999998643 7899999998643 33344567999999995      3489999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-CeEEeeeccc
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLA  657 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DFGla  657 (675)
                      ++||+|-+ ..+|.+.|........|.......++.|+.-||..|...+   |+|.||||.|||+.+.. .+||||||-|
T Consensus       509 LClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~iLKLCDfGSA  584 (752)
T KOG0670|consen  509 LCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNILKLCDFGSA  584 (752)
T ss_pred             eEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcceeeeccCccc
Confidence            99999977 5689999976666666788888899999999999999887   99999999999998764 5799999999


Q ss_pred             eecCCCcc
Q 005825          658 RMFGGDEL  665 (675)
Q Consensus       658 ~~~~~~~~  665 (675)
                      ...+.++.
T Consensus       585 ~~~~enei  592 (752)
T KOG0670|consen  585 SFASENEI  592 (752)
T ss_pred             cccccccc
Confidence            98877764

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=4e-15  Score=155.08  Aligned_cols=135  Identities=27%  Similarity=0.326  Sum_probs=112.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-----C---CceeeEEEEEEeC-
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-----H---RNLVRILGCCIEQ-  576 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-----H---~nIv~l~g~~~~~-  576 (675)
                      .++|.+.++||=|-|++||++.+ ...+.||+|+.+. .....+.-+.||++|++++     |   ..||+|++.|... 
T Consensus        77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG  155 (590)
T KOG1290|consen   77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG  155 (590)
T ss_pred             CceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence            37899999999999999999976 4578899999985 3344566788999999984     3   3699999999754 


Q ss_pred             ---CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC
Q 005825          577 ---GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD  646 (675)
Q Consensus       577 ---~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~  646 (675)
                         .+.+||+|++ |-+|..++.... .+-++.....+|++||+.||.|||.++  +|||-||||+||||-..
T Consensus       156 pNG~HVCMVfEvL-GdnLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  156 PNGQHVCMVFEVL-GDNLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCCcEEEEEehhh-hhHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeecc
Confidence               4899999998 777777775433 345788889999999999999999988  69999999999999543

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.60  E-value=2.4e-14  Score=149.38  Aligned_cols=150  Identities=37%  Similarity=0.557  Sum_probs=128.5

Q ss_pred             cceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCcc---CHHHHHHHHHHHHhcCCC-ceeeEEEEEEeCCeEEEEEEe
Q 005825          510 FSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ---GLEEFKNEMLLIAKLQHR-NLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~f~~E~~il~~l~H~-nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      |.+.+.||.|+||.||++...  ..+++|.+......   ....|.+|+.+++.+.|+ +++++...+......++++|+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            667789999999999999876  78999999864332   367899999999999988 799999999777778999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-CeEEeeeccceecCCCc
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLARMFGGDE  664 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~  664 (675)
                      +.++++.+++........+.......+..+++.++.|+|..+   ++|||+||+||+++... .+|++|||+++.+....
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence            999999977643211126788889999999999999999998   99999999999999988 79999999999775543

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.59  E-value=1.6e-14  Score=145.86  Aligned_cols=136  Identities=21%  Similarity=0.258  Sum_probs=105.5

Q ss_pred             eeeC-CcCceeEEEEEEcCCcEEEEEEecCcC-------------ccCHHHHHHHHHHHHhcCCCce--eeEEEEEEeCC
Q 005825          514 CKLG-EGGFGPVYKGRLLNGEEVAVKRLSSQS-------------GQGLEEFKNEMLLIAKLQHRNL--VRILGCCIEQG  577 (675)
Q Consensus       514 ~~IG-~G~fG~Vy~~~~~~g~~vAvK~l~~~~-------------~~~~~~f~~E~~il~~l~H~nI--v~l~g~~~~~~  577 (675)
                      ..|| .|+.|+||.++.. +..++||+.....             ......+.+|+.++.+++|++|  ++.+++.....
T Consensus        37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            4687 7889999998874 6788998875311             1223567889999999998775  67777754432


Q ss_pred             ----eEEEEEEecCC-CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEe
Q 005825          578 ----EKILILEYMPN-KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       578 ----~~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                          ..++|||++++ .+|.+++..    ..++..    .+.+|+++|.+||+.+   |+||||||+|||++.++.++|+
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI  184 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI  184 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence                23599999997 699888743    223433    3568999999999998   9999999999999999999999


Q ss_pred             eeccceecC
Q 005825          653 DFGLARMFG  661 (675)
Q Consensus       653 DFGla~~~~  661 (675)
                      |||.++...
T Consensus       185 Dfg~~~~~~  193 (239)
T PRK01723        185 DFDRGELRT  193 (239)
T ss_pred             ECCCcccCC
Confidence            999998764

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.48  E-value=1.1e-13  Score=151.59  Aligned_cols=142  Identities=22%  Similarity=0.286  Sum_probs=100.2

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCH----------------------------------------HHHHH
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGL----------------------------------------EEFKN  553 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~----------------------------------------~~f~~  553 (675)
                      +.||.|++|+||+|++.+|+.||||+.++......                                        -.|..
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            57999999999999999999999999875321100                                        02444


Q ss_pred             HHHHHHhc----CCCceeeEEEEEE-eCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHH-HHHHHHhcC
Q 005825          554 EMLLIAKL----QHRNLVRILGCCI-EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ-GLLYLHHYS  627 (675)
Q Consensus       554 E~~il~~l----~H~nIv~l~g~~~-~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~-~L~yLH~~~  627 (675)
                      |...+.++    +|.+-+.+-..+. .....+|||||++|++|.++......  ..   .+..++..+++ .+..+|+.+
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~g  277 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRDG  277 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhCC
Confidence            55555444    2333333322332 23457999999999999887632111  11   23456666666 467888877


Q ss_pred             CCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       628 ~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                         ++|+|+||.||++++++.++|+|||+++.+.++
T Consensus       278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~~  310 (437)
T TIGR01982       278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLSEE  310 (437)
T ss_pred             ---ceeCCCCcccEEECCCCcEEEEeCCCeeECCHH
Confidence               999999999999999999999999999988643

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.46  E-value=1.3e-13  Score=158.85  Aligned_cols=148  Identities=25%  Similarity=0.350  Sum_probs=114.7

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC---CCceeeEEEEEEeCCeEE
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ---HRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~---H~nIv~l~g~~~~~~~~~  580 (675)
                      ......|.+.+.||+|+||+||+|...+|+.||+|.-+....-   +|.-=.+++.+|+   -+-|.++..+..-.+.-+
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence            3445788899999999999999999888999999998764332   1111122333333   233444444445566778


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-------CCCeEEee
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-------DMNPKISD  653 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-------~~~~kl~D  653 (675)
                      ||+||.+.|+|.+++.   ..+.++|...+.++.|+++-++.||..+   |||+||||+|+||..       ...++|+|
T Consensus       771 lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lID  844 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLID  844 (974)
T ss_pred             eeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEEe
Confidence            9999999999999994   5667899999999999999999999998   999999999999943       34689999


Q ss_pred             eccceec
Q 005825          654 FGLARMF  660 (675)
Q Consensus       654 FGla~~~  660 (675)
                      ||-+-.+
T Consensus       845 fG~siDm  851 (974)
T KOG1166|consen  845 FGRSIDM  851 (974)
T ss_pred             cccceee
Confidence            9998654

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.36  E-value=3.8e-12  Score=121.42  Aligned_cols=131  Identities=21%  Similarity=0.139  Sum_probs=98.3

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCcee-eEEEEEEeCCeEEEEEEecCCCCHH
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV-RILGCCIEQGEKILILEYMPNKSLD  592 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv-~l~g~~~~~~~~~lV~Ey~~~gsL~  592 (675)
                      +.|+.|.++.||+++.. ++.+++|....... ....+..|+.++..+.+.+++ +++.+.  ....++||||+++.++.
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~   79 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL   79 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence            67899999999999874 77899998765322 234567899999988765544 455443  33458999999998875


Q ss_pred             HHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcC--CCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          593 VFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS--RFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       593 ~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ...           .....++.+++++|+.||...  +..++|+|++|.||+++ ++.++++|||.|..-
T Consensus        80 ~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~  137 (170)
T cd05151          80 TED-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMN  137 (170)
T ss_pred             ccc-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCC
Confidence            320           011235678999999999876  33469999999999999 668999999998853

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=99.31  E-value=2.7e-12  Score=105.01  Aligned_cols=71  Identities=17%  Similarity=0.272  Sum_probs=59.7

Q ss_pred             CCCCceEEeeccCCCCccceeccccCCHHHHHHHHhc---cCceeeeecccccCCceeEEecccc-cccCCcccCCCCce
Q 005825          338 IKGDQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLK---NCTCKAYANSNVTEGSGCLMWFGEL-LDASRPIRNFTGQS  413 (675)
Q Consensus       338 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~---nCsC~A~~~~~~~~~~~C~~w~~~l-~~~~~~~~~~~~~~  413 (675)
                      .....|+++.++++|+...      .++++|+++|++   ||||+||+|.+.  +++|.+|.++| .+.++...  .+.+
T Consensus         6 ~~~g~fl~~~~~klpd~~~------~s~~eC~~~Cl~~~~nCsC~Aya~~~~--~~gC~~W~~~l~~d~~~~~~--~g~~   75 (80)
T cd00129           6 KSAGTTLIKIALKIKTTKA------NTADECANRCEKNGLPFSCKAFVFAKA--RKQCLWFPFNSMSGVRKEFS--HGFD   75 (80)
T ss_pred             ecCCeEEEeecccCCcccc------cCHHHHHHHHhcCCCCCCceeeeccCC--CCCeEEecCcchhhHHhccC--CCce
Confidence            3457899999999998765      579999999999   999999999753  46899999999 99877654  5788


Q ss_pred             eeecc
Q 005825          414 VYLRQ  418 (675)
Q Consensus       414 lylrv  418 (675)
                      +|+|.
T Consensus        76 Ly~r~   80 (80)
T cd00129          76 LYENK   80 (80)
T ss_pred             eEeEC
Confidence            99973

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.31  E-value=3.6e-12  Score=106.72  Aligned_cols=80  Identities=36%  Similarity=0.749  Sum_probs=63.7

Q ss_pred             CCCCCCC---CceEEeeccCCCCccceeccccCCHHHHHHHHhccCceeeeecccccCCceeEEecccccccCCcccCCC
Q 005825          334 SSECIKG---DQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLDASRPIRNFT  410 (675)
Q Consensus       334 ~~~C~~~---~~f~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~A~~~~~~~~~~~C~~w~~~l~~~~~~~~~~~  410 (675)
                      +++|..+   +.|.++.++++|++....  ...++++|++.||+||+|+||+|.+.  +++|++|...+.+.+....  .
T Consensus         2 ~~~C~~~~~~~~f~~~~~~~~~~~~~~~--~~~s~~~C~~~Cl~nCsC~a~~~~~~--~~~C~~~~~~~~~~~~~~~--~   75 (84)
T cd01098           2 PLNCGGDGSTDGFLKLPDVKLPDNASAI--TAISLEECREACLSNCSCTAYAYNNG--SGGCLLWNGLLNNLRSLSS--G   75 (84)
T ss_pred             CcccCCCCCCCEEEEeCCeeCCCchhhh--ccCCHHHHHHHHhcCCCcceeeecCC--CCeEEEEeceecceEeecC--C
Confidence            3466543   689999999999886543  66799999999999999999999752  5679999999988765433  4


Q ss_pred             CceeeeccC
Q 005825          411 GQSVYLRQP  419 (675)
Q Consensus       411 ~~~lylrv~  419 (675)
                      +..+|||++
T Consensus        76 ~~~~yiKv~   84 (84)
T cd01098          76 GGTLYLRLA   84 (84)
T ss_pred             CcEEEEEeC
Confidence            578999975

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.28  E-value=1.1e-11  Score=137.55  Aligned_cols=147  Identities=16%  Similarity=0.200  Sum_probs=94.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCcc------------------------------C----HH---
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQ------------------------------G----LE---  549 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~------------------------------~----~~---  549 (675)
                      ..|+. +.||.|++|+||+|++.+ |+.||||++++....                              .    .+   
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            45665 689999999999999987 999999999753110                              0    01   


Q ss_pred             ---HHHHHHHHHHhc----CCCceeeEEEEEEe-CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHH-H
Q 005825          550 ---EFKNEMLLIAKL----QHRNLVRILGCCIE-QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG-L  620 (675)
Q Consensus       550 ---~f~~E~~il~~l----~H~nIv~l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~-L  620 (675)
                         .|..|+..+.++    .+.+.+.+-.++.+ ....+|||||++|+.+.++..... . ..+.   ..++...++. +
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~-~-g~d~---~~la~~~v~~~~  273 (537)
T PRK04750        199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRA-A-GTDM---KLLAERGVEVFF  273 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHh-c-CCCH---HHHHHHHHHHHH
Confidence               133444444444    24444444344333 346789999999999977531111 1 1111   1122222221 2


Q ss_pred             HHHHhcCCCceEecCCCCCCEEEcCCC----CeEEeeeccceecCCC
Q 005825          621 LYLHHYSRFRIIHRDLKASNVLLDRDM----NPKISDFGLARMFGGD  663 (675)
Q Consensus       621 ~yLH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DFGla~~~~~~  663 (675)
                      .-++..+   ++|+|+||.||+++.++    .+++.|||++..+.++
T Consensus       274 ~Qif~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        274 TQVFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             HHHHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence            2334455   99999999999999988    9999999999988654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.22  E-value=5.3e-12  Score=142.85  Aligned_cols=142  Identities=25%  Similarity=0.348  Sum_probs=110.0

Q ss_pred             eeeeeCCcCceeEEEEEEc-CCcEEEEEEec----C-cCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          512 MECKLGEGGFGPVYKGRLL-NGEEVAVKRLS----S-QSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       512 ~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~----~-~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ..+.+|.|++|.|+..... ..+..+.|...    . ... .....+..|+.+-..++|||++..+..+.+.....-+||
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            3468999999988777542 33333433322    1 111 111226678888888999999888777777777666799


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |+++ +|..++.+   ...+...++-.++.|+..|+.|||..+   |.||||||+|++++..+.+||+|||.+..+
T Consensus       402 ~~~~-Dlf~~~~~---~~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf  470 (601)
T KOG0590|consen  402 YCPY-DLFSLVMS---NGKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVF  470 (601)
T ss_pred             cccH-HHHHHHhc---ccccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceee
Confidence            9999 99998843   345777888899999999999999998   999999999999999999999999999876

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.20  E-value=9.7e-12  Score=147.60  Aligned_cols=90  Identities=17%  Similarity=0.222  Sum_probs=69.0

Q ss_pred             hcCC-CceeeEEEEE-------EeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCce
Q 005825          560 KLQH-RNLVRILGCC-------IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI  631 (675)
Q Consensus       560 ~l~H-~nIv~l~g~~-------~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i  631 (675)
                      .++| +||.+++++|       .+.+..++++||+ +++|.++|...  ...+++.+++.|+.||++||+|||+++   |
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~g---I  101 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQG---I  101 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            4455 5788888877       2334567788987 66999999532  345899999999999999999999987   9


Q ss_pred             EecCCCCCCEEEcCCCCeEEeeec
Q 005825          632 IHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       632 iHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      +||||||+||||+..+.+|++|||
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~  125 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESA  125 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeecc
Confidence            999999999999654444333333

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.18  E-value=2.3e-10  Score=113.99  Aligned_cols=143  Identities=19%  Similarity=0.251  Sum_probs=111.4

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCC--CceeeEEEEEEeCC---eEEEEEEecC
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQH--RNLVRILGCCIEQG---EKILILEYMP  587 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H--~nIv~l~g~~~~~~---~~~lV~Ey~~  587 (675)
                      +.|+.|..+.||+++..+|+.+++|....... .....+..|++++..+.+  .++.+++.+.....   ..++||||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            57899999999999887778999999765322 245678999999999975  45677888776543   5689999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS----------------------------------------  627 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----------------------------------------  627 (675)
                      |.++...+..    ..++..++..++.+++++|.+||+..                                        
T Consensus        84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (223)
T cd05154          84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER  159 (223)
T ss_pred             CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence            9988665421    24666777788888888888888421                                        


Q ss_pred             -------------CCceEecCCCCCCEEEcC--CCCeEEeeeccceec
Q 005825          628 -------------RFRIIHRDLKASNVLLDR--DMNPKISDFGLARMF  660 (675)
Q Consensus       628 -------------~~~iiHrDlkp~NILl~~--~~~~kl~DFGla~~~  660 (675)
                                   +..++|+|++|.||+++.  ++.+.|+||+.+..-
T Consensus       160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g  207 (223)
T cd05154         160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG  207 (223)
T ss_pred             HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence                         245799999999999998  667899999998753

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.17  E-value=4.4e-12  Score=137.35  Aligned_cols=144  Identities=27%  Similarity=0.312  Sum_probs=117.5

Q ss_pred             eeCCcCceeEEEEEE----cCCcEEEEEEecCcCcc--CHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEEEecC
Q 005825          515 KLGEGGFGPVYKGRL----LNGEEVAVKRLSSQSGQ--GLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~~~--~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      .+|+|+||.|++++.    ..+..+|+|.+++....  .......|..++..++ ||.+|++.-.++.+...+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            379999999998753    34778999988764221  1225667888999997 9999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      +|.|...+.   ....+.......+...++-|++++|+.+   |+|||+|++||+++.+|++|+.|||+.+..-..+
T Consensus        81 gg~lft~l~---~~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~  151 (612)
T KOG0603|consen   81 GGDLFTRLS---KEVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK  151 (612)
T ss_pred             cchhhhccc---cCCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh
Confidence            999987773   3344555555556667899999999988   9999999999999999999999999999875444

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.16  E-value=4.5e-10  Score=108.79  Aligned_cols=139  Identities=14%  Similarity=0.110  Sum_probs=99.3

Q ss_pred             eeeCCcCceeEEEEEEcC-------CcEEEEEEecCc-------------C---------ccCHHHHH----HHHHHHHh
Q 005825          514 CKLGEGGFGPVYKGRLLN-------GEEVAVKRLSSQ-------------S---------GQGLEEFK----NEMLLIAK  560 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~-------g~~vAvK~l~~~-------------~---------~~~~~~f~----~E~~il~~  560 (675)
                      ..||.|--+.||.|...+       +..+|||..+..             .         ....+.+.    .|+..|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999997543       478999965421             0         00122333    79999998


Q ss_pred             cCC--CceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHH-HhcCCCceEecCCC
Q 005825          561 LQH--RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL-HHYSRFRIIHRDLK  637 (675)
Q Consensus       561 l~H--~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~iiHrDlk  637 (675)
                      +..  -++.+++++    ...+|||||+.+..+.....   +...++..+...+..+++.+|..| |..+   |+|+||+
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~L---kd~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs  152 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKL---KDAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLS  152 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhh---hccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence            853  566677764    46789999998754422111   112244455567788999999999 6666   9999999


Q ss_pred             CCCEEEcCCCCeEEeeeccceecCCC
Q 005825          638 ASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       638 p~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +.|||++ ++.+.|+|||.|.....+
T Consensus       153 ~~NIL~~-~~~v~iIDF~qav~~~hp  177 (197)
T cd05146         153 EYNMLWH-DGKVWFIDVSQSVEPTHP  177 (197)
T ss_pred             HHHEEEE-CCcEEEEECCCceeCCCC
Confidence            9999997 468999999999877544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.14  E-value=3.3e-10  Score=106.02  Aligned_cols=136  Identities=21%  Similarity=0.295  Sum_probs=104.0

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEE-ecCc--Cc-----cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKR-LSSQ--SG-----QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~-l~~~--~~-----~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ..+.+|+-..+|.+.+.+ .++.+|. +++.  .+     ...++-.+|+.+|++++--.|..-.-+..+.+...|+|||
T Consensus         2 ~~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            367899999999997744 3455553 3332  11     1134577899999999766665555566788888999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ++|..|.+.+...          +..++..|-.-+.-||..+   |+|+||.++||++..+. +.++||||+..-...+
T Consensus        81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~E  145 (204)
T COG3642          81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEFSDEVE  145 (204)
T ss_pred             eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccccccHH
Confidence            9999999888332          3567788888999999998   99999999999998775 9999999999765444

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.07  E-value=1e-09  Score=112.07  Aligned_cols=149  Identities=26%  Similarity=0.378  Sum_probs=99.6

Q ss_pred             CcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCc---CccCHHHHHHHHHHHHhcCC-----------CceeeEEEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH-----------RNLVRILGCC  573 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H-----------~nIv~l~g~~  573 (675)
                      .+...+.||.|+++.||.+++.+ ++++|||.....   .....+++++|.-.+..+.+           .-++.+ +..
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~-d~~   91 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPL-DLL   91 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---S-EEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeee-EEE
Confidence            44566889999999999999865 899999986532   23456778877766655433           222221 111


Q ss_pred             E---------eC---C-----eEEEEEEecCCCCHHHHhc---C-CCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceE
Q 005825          574 I---------EQ---G-----EKILILEYMPNKSLDVFLF---D-PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII  632 (675)
Q Consensus       574 ~---------~~---~-----~~~lV~Ey~~~gsL~~~l~---~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ii  632 (675)
                      .         ..   .     +.+++|+-+ .++|.+++.   . ......+....++.+..|+.+.+++||+++   ++
T Consensus        92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lV  167 (288)
T PF14531_consen   92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LV  167 (288)
T ss_dssp             EETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred             EEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eE
Confidence            1         11   1     236677766 678877753   1 111234556677888899999999999998   99


Q ss_pred             ecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          633 HRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       633 HrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |+||||+|++++++|.++|+||+.....+.
T Consensus       168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~  197 (288)
T PF14531_consen  168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGT  197 (288)
T ss_dssp             EST-SGGGEEE-TTS-EEE--GGGEEETTE
T ss_pred             ecccceeeEEEcCCCCEEEcChHHHeecCc
Confidence            999999999999999999999998887654

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.03  E-value=5.1e-11  Score=116.06  Aligned_cols=138  Identities=25%  Similarity=0.464  Sum_probs=114.2

Q ss_pred             ceeeeeCCcCceeEEEEEEcCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          511 SMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      .+..+|.+...|+.|+|++.. ..+++|++.-.  .....+.|.+|.-.|+-+.||||..++|.|..+.++.+|..||+.
T Consensus       193 nl~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~  271 (448)
T KOG0195|consen  193 NLITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF  271 (448)
T ss_pred             hhhhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence            445688899999999999954 45666776532  233457899999999999999999999999999999999999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEe-cCCCCCCEEEcCCCCeEEe
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH-RDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH-rDlkp~NILl~~~~~~kl~  652 (675)
                      |+|...|++. .....+..+..+++.+||+|++|||+..  ++|- --|....+++|++.+++|+
T Consensus       272 gslynvlhe~-t~vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltaris  333 (448)
T KOG0195|consen  272 GSLYNVLHEQ-TSVVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARIS  333 (448)
T ss_pred             hHHHHHHhcC-ccEEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhhee
Confidence            9999999764 3445677889999999999999999976  3444 4688999999999998875

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.03  E-value=2.7e-09  Score=99.46  Aligned_cols=150  Identities=23%  Similarity=0.272  Sum_probs=107.6

Q ss_pred             eeeeeCCcCceeEEEEEEcCCcEEEEEE-ecCc-------CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          512 MECKLGEGGFGPVYKGRLLNGEEVAVKR-LSSQ-------SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       512 ~~~~IG~G~fG~Vy~~~~~~g~~vAvK~-l~~~-------~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ....|-||+-+.|+++.+ .|+...||. ..+.       .....++..+|++++.+++--.|.--.-++.+...-.|+|
T Consensus        11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            457899999999999988 456666663 3221       1123457888999999987555554444566677778999


Q ss_pred             EecCC-CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC---CeEEeeecccee
Q 005825          584 EYMPN-KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM---NPKISDFGLARM  659 (675)
Q Consensus       584 Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DFGla~~  659 (675)
                      ||+++ .++.+++........ .......++..|-+.+.-||..+   |||+||..+||+|..++   .+.++|||++..
T Consensus        90 E~~~g~~~vk~~i~~~~~~~~-~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDES-EDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             EeccchhHHHHHHHHHccCcc-cchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence            99987 577777754322222 22233678889999999999988   99999999999996654   358999999976


Q ss_pred             cCCCccc
Q 005825          660 FGGDELQ  666 (675)
Q Consensus       660 ~~~~~~~  666 (675)
                      -..+|.+
T Consensus       166 s~~~EDK  172 (229)
T KOG3087|consen  166 SRLPEDK  172 (229)
T ss_pred             ccCcccc
Confidence            6444433

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.85  E-value=6.5e-08  Score=98.98  Aligned_cols=135  Identities=17%  Similarity=0.118  Sum_probs=97.7

Q ss_pred             CceeEEEEEEcCCcEEEEEEecCcCc-----------cCHHHHHHHHHHHHhcCC--CceeeEEEEEEe-----CCeEEE
Q 005825          520 GFGPVYKGRLLNGEEVAVKRLSSQSG-----------QGLEEFKNEMLLIAKLQH--RNLVRILGCCIE-----QGEKIL  581 (675)
Q Consensus       520 ~fG~Vy~~~~~~g~~vAvK~l~~~~~-----------~~~~~f~~E~~il~~l~H--~nIv~l~g~~~~-----~~~~~l  581 (675)
                      ....|++.++ +|+.+.||+......           .....+.+|...+.++..  -....++++...     ...-+|
T Consensus        34 ~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~L  112 (268)
T PRK15123         34 EGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFI  112 (268)
T ss_pred             CCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEE
Confidence            3344666665 677899997643221           111247889999988853  344455666543     235789


Q ss_pred             EEEecCCC-CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-------CCCeEEee
Q 005825          582 ILEYMPNK-SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-------DMNPKISD  653 (675)
Q Consensus       582 V~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-------~~~~kl~D  653 (675)
                      |+|++++. +|.+++.+.. ....+...+..++.+++..+.-||..+   |+|+|+++.|||++.       +..+.|+|
T Consensus       113 Vte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~~LID  188 (268)
T PRK15123        113 ITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKLSVID  188 (268)
T ss_pred             EEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceEEEEE
Confidence            99999986 8998874211 223455667789999999999999998   999999999999975       46899999


Q ss_pred             ecccee
Q 005825          654 FGLARM  659 (675)
Q Consensus       654 FGla~~  659 (675)
                      |+.++.
T Consensus       189 l~r~~~  194 (268)
T PRK15123        189 LHRAQI  194 (268)
T ss_pred             CCcccc
Confidence            999865

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.83  E-value=4.9e-09  Score=107.59  Aligned_cols=89  Identities=29%  Similarity=0.500  Sum_probs=68.6

Q ss_pred             CCCceeeEEEEEEe---------------------------CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHH
Q 005825          562 QHRNLVRILGCCIE---------------------------QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE  614 (675)
Q Consensus       562 ~H~nIv~l~g~~~~---------------------------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~  614 (675)
                      +|||||++.++|.+                           +..+|+||.-. ..+|.+++-.    ...+...+.-|+.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~----~~~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWT----RHRSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhc----CCCchHHHHHHHH
Confidence            59999998888753                           23568888755 4578888732    2345566677888


Q ss_pred             HHHHHHHHHHhcCCCceEecCCCCCCEEE--cCCC--CeEEeeeccce
Q 005825          615 GIAQGLLYLHHYSRFRIIHRDLKASNVLL--DRDM--NPKISDFGLAR  658 (675)
Q Consensus       615 ~ia~~L~yLH~~~~~~iiHrDlkp~NILl--~~~~--~~kl~DFGla~  658 (675)
                      |+++|+.|||.++   |.|||+|.+||||  |+|+  ...|+|||.+-
T Consensus       349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceee
Confidence            9999999999998   9999999999998  4554  46889999664

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.82  E-value=5.9e-10  Score=127.00  Aligned_cols=142  Identities=20%  Similarity=0.225  Sum_probs=113.1

Q ss_pred             CcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcC-ccCHHHHHHHHHH--HHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          509 NFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS-GQGLEEFKNEMLL--IAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~f~~E~~i--l~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++...+.||.+.|=+|.+|+.++|. |+||+.-+.. ....+.|.++++-  +..++|||.+.+.-+-...+..|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            6677789999999999999998887 8899876543 4455666655443  4556899999887776666667788777


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      +. -+|.+.|   ..+..+...+..-|+.|++.||.-+|..+   |.|+|||.+||||+.-.=+.|+||.--|
T Consensus       103 vk-hnLyDRl---STRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFK  168 (1431)
T KOG1240|consen  103 VK-HNLYDRL---STRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFK  168 (1431)
T ss_pred             Hh-hhhhhhh---ccchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccC
Confidence            74 3565555   34556777888889999999999999988   9999999999999999999999998555

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.80  E-value=4.8e-08  Score=94.31  Aligned_cols=128  Identities=25%  Similarity=0.287  Sum_probs=83.5

Q ss_pred             eEEEEEEcCCcEEEEEEecCcC--------------c-------c-----CHHHHHHHHHHHHhcCCC--ceeeEEEEEE
Q 005825          523 PVYKGRLLNGEEVAVKRLSSQS--------------G-------Q-----GLEEFKNEMLLIAKLQHR--NLVRILGCCI  574 (675)
Q Consensus       523 ~Vy~~~~~~g~~vAvK~l~~~~--------------~-------~-----~~~~f~~E~~il~~l~H~--nIv~l~g~~~  574 (675)
                      .||.|...++..+|||.-+...              .       .     .....+.|.+.|.++...  ++.+++.+- 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            4899999999999999754210              0       0     023466799999999765  566776552 


Q ss_pred             eCCeEEEEEEecC--CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHH-HhcCCCceEecCCCCCCEEEcCCCCeEE
Q 005825          575 EQGEKILILEYMP--NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL-HHYSRFRIIHRDLKASNVLLDRDMNPKI  651 (675)
Q Consensus       575 ~~~~~~lV~Ey~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~iiHrDlkp~NILl~~~~~~kl  651 (675)
                         ...|||||++  |..+..+....     +.......++.+++..+..+ |..+   |+|+||.+.|||++++ .+.|
T Consensus        80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~i  147 (188)
T PF01163_consen   80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYI  147 (188)
T ss_dssp             ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE
T ss_pred             ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEE
Confidence               3479999999  65554433111     11233455777788866664 5665   9999999999999988 9999


Q ss_pred             eeeccceecCCC
Q 005825          652 SDFGLARMFGGD  663 (675)
Q Consensus       652 ~DFGla~~~~~~  663 (675)
                      +|||.|.....+
T Consensus       148 IDf~qav~~~~p  159 (188)
T PF01163_consen  148 IDFGQAVDSSHP  159 (188)
T ss_dssp             --GTTEEETTST
T ss_pred             EecCcceecCCc
Confidence            999999877543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.68  E-value=2.7e-08  Score=108.18  Aligned_cols=100  Identities=33%  Similarity=0.505  Sum_probs=90.0

Q ss_pred             HHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCC
Q 005825          558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLK  637 (675)
Q Consensus       558 l~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk  637 (675)
                      |+.+.|.|+.+++|.+.++...++|.+|+..|+|.+.+..  ....++|.-...+..+|+.||+|||.-.  -..|+.++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~   76 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALK   76 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeec
Confidence            3568899999999999999999999999999999999964  3456889999999999999999999753  23999999


Q ss_pred             CCCEEEcCCCCeEEeeeccceecC
Q 005825          638 ASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       638 p~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +.|+++|....+||+|||+..+..
T Consensus        77 s~nClvd~~w~lklt~~Gl~~~~~  100 (484)
T KOG1023|consen   77 SSNCLVDSRWVLKLTDFGLNSLLE  100 (484)
T ss_pred             cccceeeeeEEEEechhhhccccc
Confidence            999999999999999999998874

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.65  E-value=3e-09  Score=120.61  Aligned_cols=151  Identities=26%  Similarity=0.356  Sum_probs=117.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC--CcEEEEEEecCcC--ccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN--GEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~--g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ..|.+.+.||+|+|+.|-......  ...+|+|.+....  ....+....|..+-..+. |+|++++++...+.+..+++
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            456667789999999998886533  4456777665432  223344555777777776 99999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHH-hcCCCceEecCCCCCCEEEcCCC-CeEEeeeccceec
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH-HYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLARMF  660 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~iiHrDlkp~NILl~~~~-~~kl~DFGla~~~  660 (675)
                      +||..++++...+..... ...+....-.++.|+..++.|+| +.+   +.||||||+|.+++..+ ..|++|||+|..+
T Consensus       100 ~~~s~g~~~f~~i~~~~~-~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHPDS-TGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             cCcccccccccccccCCc-cCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccc
Confidence            999999999877731111 12334455568889999999999 777   99999999999999999 9999999999887


Q ss_pred             CC
Q 005825          661 GG  662 (675)
Q Consensus       661 ~~  662 (675)
                      ..
T Consensus       176 ~~  177 (601)
T KOG0590|consen  176 RN  177 (601)
T ss_pred             cc
Confidence            55

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=98.62  E-value=1.5e-07  Score=83.62  Aligned_cols=88  Identities=19%  Similarity=0.255  Sum_probs=63.2

Q ss_pred             eEEEeeCCeEEEEeCC-CCeEEEeccCCCC-CCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccccccccc
Q 005825           90 VLTISNNGKLVLLNQT-NGTIWSTNASSEA-KNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDL  167 (675)
Q Consensus        90 ~l~l~~~G~Lvl~~~~-g~~vWss~~~~~~-~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~  167 (675)
                      ++.++.||+||+++.. +.++|++++.... ....+.|+++|||||++.     .+.++|+|  ++              
T Consensus        23 ~~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~-----~g~~vW~S--~t--------------   81 (114)
T smart00108       23 TLIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDG-----DGRVVWSS--NT--------------   81 (114)
T ss_pred             ccCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeC-----CCCEEEEe--cc--------------
Confidence            3556689999999875 5899999986432 236789999999999985     46789987  11              


Q ss_pred             cCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeC
Q 005825          168 KNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTG  214 (675)
Q Consensus       168 ~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g  214 (675)
                                     ....|.|.+.|+++|+.+++-. ...+.|.+.
T Consensus        82 ---------------~~~~~~~~~~L~ddGnlvl~~~-~~~~~W~Sf  112 (114)
T smart00108       82 ---------------TGANGNYVLVLLDDGNLVIYDS-DGNFLWQSF  112 (114)
T ss_pred             ---------------cCCCCceEEEEeCCCCEEEECC-CCCEEeCCC
Confidence                           0134568899999999766532 234677653

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.56  E-value=3.4e-07  Score=91.06  Aligned_cols=140  Identities=20%  Similarity=0.200  Sum_probs=98.4

Q ss_pred             CcceeeeeCCcCceeEEEEEEcCCcEEEEEEecC----------c----------Ccc--CHHHHHHHHHHHHhcCCC--
Q 005825          509 NFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSS----------Q----------SGQ--GLEEFKNEMLLIAKLQHR--  564 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~----------~----------~~~--~~~~f~~E~~il~~l~H~--  564 (675)
                      -..+.++||.|--+.||.|..+.|.++|||.=+.          .          +..  .....++|.++|.+|.-.  
T Consensus        92 ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          92 VEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            3456689999999999999999999999994211          0          000  123456788999998754  


Q ss_pred             ceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc
Q 005825          565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD  644 (675)
Q Consensus       565 nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~  644 (675)
                      .+.+.+++    +...+||||++|-.|...-        +.-...-.|+..|++-+.-+-+.|   |||+|+.+-||+++
T Consensus       172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~  236 (304)
T COG0478         172 KVPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVT  236 (304)
T ss_pred             CCCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEe
Confidence            66666554    4568999999997664321        112223334455555544444555   99999999999999


Q ss_pred             CCCCeEEeeeccceecCCC
Q 005825          645 RDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       645 ~~~~~kl~DFGla~~~~~~  663 (675)
                      ++|.+.++||--+.....+
T Consensus       237 ~dg~~~vIDwPQ~v~~~hp  255 (304)
T COG0478         237 EDGDIVVIDWPQAVPISHP  255 (304)
T ss_pred             cCCCEEEEeCcccccCCCC
Confidence            9999999999877665443

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.56  E-value=7.9e-07  Score=87.80  Aligned_cols=108  Identities=23%  Similarity=0.217  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHhcC--CCceeeEEEEEEeCC----eEEEEEEecCCC-CHHHHhcCCCCcccCCHHHHHHHHHHHHHHH
Q 005825          548 LEEFKNEMLLIAKLQ--HRNLVRILGCCIEQG----EKILILEYMPNK-SLDVFLFDPTKKRLLGWQARIGIIEGIAQGL  620 (675)
Q Consensus       548 ~~~f~~E~~il~~l~--H~nIv~l~g~~~~~~----~~~lV~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L  620 (675)
                      .....+|...+.++.  .-...+.+++.....    .-+||+|++++. +|.+++....   ..+...+..++.+++..+
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~---~~~~~~~~~ll~~l~~~i  131 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE---QLDPSQRRELLRALARLI  131 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc---ccchhhHHHHHHHHHHHH
Confidence            456788888888875  344566777766533    458999999984 8999884321   245566788999999999


Q ss_pred             HHHHhcCCCceEecCCCCCCEEEcCCC---CeEEeeeccceecC
Q 005825          621 LYLHHYSRFRIIHRDLKASNVLLDRDM---NPKISDFGLARMFG  661 (675)
Q Consensus       621 ~yLH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DFGla~~~~  661 (675)
                      +-||+.+   |+|+|++|.|||++.+.   .+.++||+-++...
T Consensus       132 ~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  132 AKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            9999998   99999999999999887   89999999988754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=98.54  E-value=2.7e-07  Score=82.16  Aligned_cols=88  Identities=19%  Similarity=0.258  Sum_probs=63.6

Q ss_pred             EEEee-CCeEEEEeCC-CCeEEEeccCCC-CCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccccccccc
Q 005825           91 LTISN-NGKLVLLNQT-NGTIWSTNASSE-AKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDL  167 (675)
Q Consensus        91 l~l~~-~G~Lvl~~~~-g~~vWss~~~~~-~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~  167 (675)
                      +.++. ||+||+++.. +.++|++|+... .....+.|.++|||||++.     .+.++|+|=-                
T Consensus        24 ~~~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~-----~g~~vW~S~~----------------   82 (116)
T cd00028          24 LIMQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDG-----SGTVVWSSNT----------------   82 (116)
T ss_pred             CCCCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcC-----CCcEEEEecc----------------
Confidence            44555 8999999865 589999998653 3456789999999999986     4578998610                


Q ss_pred             cCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCc
Q 005825          168 KNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGE  215 (675)
Q Consensus       168 ~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~  215 (675)
                                     ....+.+.+.|+++|+..++-.+ ..+.|.+..
T Consensus        83 ---------------~~~~~~~~~~L~ddGnlvl~~~~-~~~~W~Sf~  114 (116)
T cd00028          83 ---------------TRVNGNYVLVLLDDGNLVLYDSD-GNFLWQSFD  114 (116)
T ss_pred             ---------------cCCCCceEEEEeCCCCEEEECCC-CCEEEcCCC
Confidence                           01246688999999996665333 356787653

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.52  E-value=4.1e-07  Score=100.19  Aligned_cols=123  Identities=21%  Similarity=0.272  Sum_probs=99.8

Q ss_pred             EEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHH
Q 005825          528 RLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQ  607 (675)
Q Consensus       528 ~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~  607 (675)
                      +..++.+|.|...+.......+...+-++-|+.++||||++++......+..|||+|-+  --|..++..      +...
T Consensus        33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~------l~~~  104 (690)
T KOG1243|consen   33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE------LGKE  104 (690)
T ss_pred             eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH------hHHH
Confidence            34568889999888655534455777889999999999999999999999999999977  345555532      2234


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       608 ~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      .....+.||+.||.|||+.+  .++|++|.-.-|++++.|+.||++|.++...
T Consensus       105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~  155 (690)
T KOG1243|consen  105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKA  155 (690)
T ss_pred             HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEecc
Confidence            44556789999999999877  5999999999999999999999999988654

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.47  E-value=1.3e-06  Score=93.32  Aligned_cols=140  Identities=19%  Similarity=0.282  Sum_probs=111.5

Q ss_pred             eeEEEEE-EcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeEEEEEEecCC-CCHHHHh
Q 005825          522 GPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE----QGEKILILEYMPN-KSLDVFL  595 (675)
Q Consensus       522 G~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~----~~~~~lV~Ey~~~-gsL~~~l  595 (675)
                      .+.|++. ..||..+++|+++....+....-..-++.++++.|+|||++..++..    ...++|||+|.|+ ++|.++-
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            5678885 46899999999965443333333456788999999999999998863    3468899999985 6776665


Q ss_pred             cCC------------CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          596 FDP------------TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       596 ~~~------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +..            ......++...+.++.|+..||.++|+.|   +.-+-|.|.+||++.+.+++|+--|+...+..+
T Consensus       370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d  446 (655)
T KOG3741|consen  370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQED  446 (655)
T ss_pred             ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence            432            22345678889999999999999999998   888999999999999999999999988888666


Q ss_pred             c
Q 005825          664 E  664 (675)
Q Consensus       664 ~  664 (675)
                      .
T Consensus       447 ~  447 (655)
T KOG3741|consen  447 P  447 (655)
T ss_pred             C
Confidence            5

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.46  E-value=1.3e-07  Score=108.33  Aligned_cols=112  Identities=27%  Similarity=0.370  Sum_probs=78.8

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ...+|..++.|..|++|.||..+.+. .+++|+|+-+. .- ..+   +   ++.....|.+|                 
T Consensus        81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq-~l-ilR---n---ilt~a~npfvv-----------------  135 (1205)
T KOG0606|consen   81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQ-NL-ILR---N---ILTFAGNPFVV-----------------  135 (1205)
T ss_pred             CccccceeEeeccCCCCceeeeeccccccchhhccccc-ch-hhh---c---cccccCCccee-----------------
Confidence            45788999999999999999998754 67788843332 11 001   1   33333444444                 


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                          |+-...+.   ..+.++-        +++.+++|||+.+   |+|||+||+|.||+.-|++|++|||+.++-
T Consensus       136 ----gDc~tllk---~~g~lPv--------dmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~G  193 (1205)
T KOG0606|consen  136 ----GDCATLLK---NIGPLPV--------DMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKG  193 (1205)
T ss_pred             ----chhhhhcc---cCCCCcc--------hhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhh
Confidence                44444442   2222322        2378999999998   999999999999999999999999999853

>PRK09902 hypothetical protein; Provisional

Probab=98.46  E-value=5.2e-06  Score=80.86  Aligned_cols=139  Identities=15%  Similarity=0.145  Sum_probs=103.3

Q ss_pred             eCCcCceeEEEEEEcCCcEEEEEEecCc------CccCHHHHHHHHHHHHhcCC--CceeeEEEEEEeCC----eEEEEE
Q 005825          516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQ------SGQGLEEFKNEMLLIAKLQH--RNLVRILGCCIEQG----EKILIL  583 (675)
Q Consensus       516 IG~G~fG~Vy~~~~~~g~~vAvK~l~~~------~~~~~~~f~~E~~il~~l~H--~nIv~l~g~~~~~~----~~~lV~  583 (675)
                      -|+||-+.|++-.+. |+.+-+|+-...      -+.....|.+|+..|.++..  -.+.+.+.......    .-+||+
T Consensus        26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            466888889987764 447888876521      14567889999999999853  33555552222221    368999


Q ss_pred             EecCC-CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC--eEEeeecccee
Q 005825          584 EYMPN-KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN--PKISDFGLARM  659 (675)
Q Consensus       584 Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~--~kl~DFGla~~  659 (675)
                      |-+++ -+|.+++.+. .....+...+..++.+|++.++-||..+   +.|+|+-+.||+++.++.  ++++||.-++.
T Consensus       105 e~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        105 EDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            97754 6888887432 1224567778899999999999999998   999999999999986666  99999987764

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.41  E-value=1.1e-06  Score=97.45  Aligned_cols=142  Identities=18%  Similarity=0.236  Sum_probs=93.2

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccC------------------------------HHH----------HHH
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQG------------------------------LEE----------FKN  553 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~------------------------------~~~----------f~~  553 (675)
                      +.|+.++-|+||+|++.+|+.||||+.++.-...                              .++          +..
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            5789999999999999999999999876531100                              011          222


Q ss_pred             HHHHHHhc----CCCceeeEEEEEE-eCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHH-HHHHHhcC
Q 005825          554 EMLLIAKL----QHRNLVRILGCCI-EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG-LLYLHHYS  627 (675)
Q Consensus       554 E~~il~~l----~H~nIv~l~g~~~-~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~-L~yLH~~~  627 (675)
                      |..-+.++    ++..-+++=.++. -.....|+|||++|-.+.+......  ...+   +..|+..++++ +..+-..+
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d---~k~ia~~~~~~f~~q~~~dg  285 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGID---RKELAELLVRAFLRQLLRDG  285 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCC---HHHHHHHHHHHHHHHHHhcC
Confidence            33333333    2222233333332 2457899999999999988753221  2233   23344444443 22333344


Q ss_pred             CCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       628 ~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                         ++|.|..|.||+++.++++-+.|||+...+++.
T Consensus       286 ---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         286 ---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             ---ccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence               999999999999999999999999999887654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.40  E-value=1.5e-07  Score=102.47  Aligned_cols=148  Identities=23%  Similarity=0.275  Sum_probs=116.9

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE--cCCcEEEEEEecCcCccCHHH--HHHHHHHHHhc-CCCceeeEEEEEEeCCeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL--LNGEEVAVKRLSSQSGQGLEE--FKNEMLLIAKL-QHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~--f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~  580 (675)
                      ...+|.++..||.|.|+.|++...  .++..+++|.+.+.......+  -..|+.+...+ .|.++++....+..-...+
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~  342 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY  342 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence            456888899999999999999864  457789999887643322222  23455555555 5888888877777777888


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC-CCeEEeeecccee
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLARM  659 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DFGla~~  659 (675)
                      +=-||++++++...+   .-...++...++.+..|++.++.++|+..   ++|+|+||+||++..+ +..++.|||.+..
T Consensus       343 ip~e~~~~~s~~l~~---~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  343 IPLEFCEGGSSSLRS---VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTR  416 (524)
T ss_pred             CchhhhcCcchhhhh---HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccc
Confidence            999999999987766   23345677788889999999999999887   9999999999999886 7889999999863

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.38  E-value=6.2e-06  Score=82.57  Aligned_cols=139  Identities=17%  Similarity=0.158  Sum_probs=86.3

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCc--eeeEEEEEEeCCeEEEEEEecCCCC-
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN--LVRILGCCIEQGEKILILEYMPNKS-  590 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~n--Iv~l~g~~~~~~~~~lV~Ey~~~gs-  590 (675)
                      ..||+|..+.||+.   .+..+++|......  ......+|.+++..+..-.  +.+.+++....+...+|||+++|.. 
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~   81 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS   81 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence            68999999999984   24567778776422  3456788999999886433  4677888777778889999999973 


Q ss_pred             HHHHh---------------------cCCCCcccCCHHHHH-HHHH----------HHHH-HHHHHHh-cCCCceEecCC
Q 005825          591 LDVFL---------------------FDPTKKRLLGWQARI-GIIE----------GIAQ-GLLYLHH-YSRFRIIHRDL  636 (675)
Q Consensus       591 L~~~l---------------------~~~~~~~~l~~~~~~-~i~~----------~ia~-~L~yLH~-~~~~~iiHrDl  636 (675)
                      +...+                     +.... .......+. .+..          .+.. ...+|.. ..+..++|+|+
T Consensus        82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~-~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~  160 (226)
T TIGR02172        82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKC-DTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF  160 (226)
T ss_pred             hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence            22111                     11000 000100000 0000          0111 1222221 12335789999


Q ss_pred             CCCCEEEcCCCCeEEeeecccee
Q 005825          637 KASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       637 kp~NILl~~~~~~kl~DFGla~~  659 (675)
                      .|.||++++++ +.|+||+.|..
T Consensus       161 ~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       161 QIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CCCcEEEcCCC-cEEEechhcCc
Confidence            99999999988 99999998874

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.30  E-value=5e-07  Score=98.51  Aligned_cols=152  Identities=24%  Similarity=0.319  Sum_probs=118.3

Q ss_pred             CCcceeeeeCC--cCceeEEEEEE---cCCcEEEEEEecC--cCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeE
Q 005825          508 ENFSMECKLGE--GGFGPVYKGRL---LNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEK  579 (675)
Q Consensus       508 ~~f~~~~~IG~--G~fG~Vy~~~~---~~g~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~  579 (675)
                      ..|...+.+|.  |.+|.||.++.   .++..+|+|+-+.  ..+.....=.+|+...++++ |+|.++....+...+..
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l  193 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL  193 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence            34566678999  99999999976   3578899998442  22233333445666667774 99999988888889999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHH----HHHHHHhcCCCceEecCCCCCCEEEcCC-CCeEEeee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ----GLLYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDF  654 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~----~L~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DF  654 (675)
                      ++-+|++ +.+|.++.+.  ....++......+..+..+    ||.++|...   |+|-|+||.||++..+ ...+++||
T Consensus       194 fiqtE~~-~~sl~~~~~~--~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df  267 (524)
T KOG0601|consen  194 FIQTELC-GESLQSYCHT--PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDF  267 (524)
T ss_pred             eeeeccc-cchhHHhhhc--ccccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCc
Confidence            9988887 4778777643  2334566667777777777    999999987   9999999999999998 89999999


Q ss_pred             ccceecCCCcc
Q 005825          655 GLARMFGGDEL  665 (675)
Q Consensus       655 Gla~~~~~~~~  665 (675)
                      |+...++....
T Consensus       268 ~~v~~i~~~~~  278 (524)
T KOG0601|consen  268 GLVSKISDGNF  278 (524)
T ss_pred             ceeEEccCCcc
Confidence            99999876653

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.28  E-value=1.4e-05  Score=78.17  Aligned_cols=140  Identities=16%  Similarity=0.170  Sum_probs=93.7

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHH---------HHHHHHHhcCC---CceeeEEEE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFK---------NEMLLIAKLQH---RNLVRILGC  572 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~---------~E~~il~~l~H---~nIv~l~g~  572 (675)
                      ...++|...+.+-......|.+-.. +++.+.+|..+.......+.|.         +++..+.+++.   ...+.++.+
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~  106 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA  106 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence            4567888888887777777777766 5688899987654333333322         33333444432   223333333


Q ss_pred             EEe-----CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC
Q 005825          573 CIE-----QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM  647 (675)
Q Consensus       573 ~~~-----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~  647 (675)
                      ...     ....+|+|||++|..|.++..       ++.    .++..+++++.-||+.|   +.|+|..|.|+++++++
T Consensus       107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~  172 (229)
T PF06176_consen  107 AEKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG  172 (229)
T ss_pred             eeeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc
Confidence            222     234568999999988865531       221    25566888899999998   99999999999999655


Q ss_pred             CeEEeeeccceec
Q 005825          648 NPKISDFGLARMF  660 (675)
Q Consensus       648 ~~kl~DFGla~~~  660 (675)
                       +++.||+..+..
T Consensus       173 -i~iID~~~k~~~  184 (229)
T PF06176_consen  173 -IRIIDTQGKRMS  184 (229)
T ss_pred             -EEEEECcccccc
Confidence             999999988754

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=98.25  E-value=2.9e-06  Score=69.40  Aligned_cols=60  Identities=38%  Similarity=0.878  Sum_probs=47.6

Q ss_pred             CceEEeeccCCCCccceeccccCCHHHHHHHHhc-cCceeeeecccccCCceeEEec-ccccccC
Q 005825          341 DQFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLK-NCTCKAYANSNVTEGSGCLMWF-GELLDAS  403 (675)
Q Consensus       341 ~~f~~~~~~~~~~~~~~~~~~~~~~~~C~~~Cl~-nCsC~A~~~~~~~~~~~C~~w~-~~l~~~~  403 (675)
                      ..|..++++.+++..... ....++++|++.|+. +|+|.||.|..  .+.+|.+|. +.+.+..
T Consensus         4 ~~f~~~~~~~l~~~~~~~-~~~~s~~~C~~~C~~~~~~C~s~~y~~--~~~~C~l~~~~~~~~~~   65 (78)
T smart00473        4 DCFVRLPNTKLPGFSRIV-ISVASLEECASKCLNSNCSCRSFTYNN--GTKGCLLWSESSLGDAR   65 (78)
T ss_pred             ceeEEecCccCCCCccee-EcCCCHHHHHHHhCCCCCceEEEEEcC--CCCEEEEeeCCccccce
Confidence            568999999998665432 345789999999999 99999999975  356799999 6666654

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.23  E-value=2.3e-06  Score=81.90  Aligned_cols=62  Identities=24%  Similarity=0.144  Sum_probs=53.9

Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |+|.+++..  ....+++.++..|+.||+.||.|||+++         ||+|||++.++.+|+  ||+++.....
T Consensus         1 GsL~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~   62 (176)
T smart00750        1 VSLADILEV--RGRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE   62 (176)
T ss_pred             CcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc
Confidence            688888853  2346899999999999999999999875         999999999999999  9999987543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.21  E-value=1.9e-05  Score=80.17  Aligned_cols=141  Identities=14%  Similarity=0.137  Sum_probs=87.9

Q ss_pred             eeCCcCc-eeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEEEecCCCCHH
Q 005825          515 KLGEGGF-GPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILILEYMPNKSLD  592 (675)
Q Consensus       515 ~IG~G~f-G~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~  592 (675)
                      .|-.|.. ..||+.... +..+.||+.....   ...+..|++++..+. +--+.+++++....+..++|||+++|.++.
T Consensus         5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~   80 (244)
T cd05150           5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA   80 (244)
T ss_pred             ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence            4555555 788999764 4678888876432   345678898888874 445667888877767789999999998886


Q ss_pred             HHh-------------------cCCCC-cccCC-H-HHHHHHHH--------------------HHHHHHHHHHh----c
Q 005825          593 VFL-------------------FDPTK-KRLLG-W-QARIGIIE--------------------GIAQGLLYLHH----Y  626 (675)
Q Consensus       593 ~~l-------------------~~~~~-~~~l~-~-~~~~~i~~--------------------~ia~~L~yLH~----~  626 (675)
                      ...                   +.... ..... + ..++.-..                    .+...+..|-.    .
T Consensus        81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  160 (244)
T cd05150          81 ALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAE  160 (244)
T ss_pred             HhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCc
Confidence            432                   11000 00111 0 01110000                    01111222211    1


Q ss_pred             CCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       627 ~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ..+.++|+|+.|.|||++++..+.|+||+.|..
T Consensus       161 ~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         161 EDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             CceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            234589999999999999988889999998874

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.19  E-value=2.6e-05  Score=77.94  Aligned_cols=145  Identities=23%  Similarity=0.222  Sum_probs=87.7

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCC--ceeeEEEEEEe---CCeEEEEEEecC
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHR--NLVRILGCCIE---QGEKILILEYMP  587 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~--nIv~l~g~~~~---~~~~~lV~Ey~~  587 (675)
                      .+.|+.|..+.||+....+ ..+++|.....  .....+..|..++..+...  .+.+++.....   ....+++||+++
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            3679999999999999877 68999997653  4456788899888888533  35677765533   235789999999


Q ss_pred             CCCHHH----------------Hh---cCC-CCcccCCHHH---------HHHH------------HHHHHH-HHHHHHh
Q 005825          588 NKSLDV----------------FL---FDP-TKKRLLGWQA---------RIGI------------IEGIAQ-GLLYLHH  625 (675)
Q Consensus       588 ~gsL~~----------------~l---~~~-~~~~~l~~~~---------~~~i------------~~~ia~-~L~yLH~  625 (675)
                      +..+..                .+   +.. .......+..         ....            ...+.+ .+..+++
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (239)
T PF01636_consen   79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA  158 (239)
T ss_dssp             SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence            998877                11   111 0111111110         0000            111222 3334432


Q ss_pred             ----cCCCceEecCCCCCCEEEc-CCCCeEEeeeccceec
Q 005825          626 ----YSRFRIIHRDLKASNVLLD-RDMNPKISDFGLARMF  660 (675)
Q Consensus       626 ----~~~~~iiHrDlkp~NILl~-~~~~~kl~DFGla~~~  660 (675)
                          ..+..++|+|+.|.|||++ +++.+.|.||+.+..-
T Consensus       159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~  198 (239)
T PF01636_consen  159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWG  198 (239)
T ss_dssp             HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEE
T ss_pred             hhccCCCcEEEEeccccccceeeeccceeEEEecccceEC
Confidence                2345699999999999999 6666789999988754

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.19  E-value=6.1e-06  Score=79.97  Aligned_cols=106  Identities=23%  Similarity=0.214  Sum_probs=83.7

Q ss_pred             HHHHHHHHhcCC-CceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCc
Q 005825          552 KNEMLLIAKLQH-RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR  630 (675)
Q Consensus       552 ~~E~~il~~l~H-~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~  630 (675)
                      ..|.-++..+++ +++.+++|+|-    .++|.||.+.+++...-..-..-...+|..|.+||.++++.+.+|++.....
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            357888888986 69999999993    4778999998765421000011124689999999999999999999865556


Q ss_pred             eEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          631 IIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       631 iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      +.-.|++|+|+-+++++++|++|...+-...
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~  113 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVED  113 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence            8889999999999999999999999876553

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.13  E-value=4.9e-07  Score=96.91  Aligned_cols=81  Identities=28%  Similarity=0.394  Sum_probs=71.9

Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      .+++.|+++...+|.++|.+.......++.....++.|++.|++|   ++   .+|||+||.||+...+..+||.|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence            478999999999999999766556667888899999999999999   55   999999999999999999999999999


Q ss_pred             eecCCCc
Q 005825          658 RMFGGDE  664 (675)
Q Consensus       658 ~~~~~~~  664 (675)
                      -.+...+
T Consensus       404 ts~~~~~  410 (516)
T KOG1033|consen  404 TSQDKDE  410 (516)
T ss_pred             eecccCC
Confidence            8776555

>PLN02876 acyl-CoA dehydrogenase

Probab=98.04  E-value=6.9e-05  Score=89.36  Aligned_cols=79  Identities=18%  Similarity=0.399  Sum_probs=58.6

Q ss_pred             eeeeCCcCceeEEEEEEcCC---cEEEEEEecCcC-ccCHHHHHHHHHHHHhcC-CCce--eeEEEEEEeC---CeEEEE
Q 005825          513 ECKLGEGGFGPVYKGRLLNG---EEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQ-HRNL--VRILGCCIEQ---GEKILI  582 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g---~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~-H~nI--v~l~g~~~~~---~~~~lV  582 (675)
                      .+.|+.|.+..+|+....++   ..+++|+..... ......+.+|+++++.+. |+++  .+++.+|.+.   +..++|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            47889999999999877554   367777764322 223457889999999995 6654  7888888764   467899


Q ss_pred             EEecCCCCH
Q 005825          583 LEYMPNKSL  591 (675)
Q Consensus       583 ~Ey~~~gsL  591 (675)
                      |||++|..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999998653

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.03  E-value=2.9e-06  Score=85.73  Aligned_cols=97  Identities=29%  Similarity=0.346  Sum_probs=80.2

Q ss_pred             HHHHHhcCCCceeeEEEEEEeC-----CeEEEEEEecCCCCHHHHhcCCCC-cccCCHHHHHHHHHHHHHHHHHHHhcCC
Q 005825          555 MLLIAKLQHRNLVRILGCCIEQ-----GEKILILEYMPNKSLDVFLFDPTK-KRLLGWQARIGIIEGIAQGLLYLHHYSR  628 (675)
Q Consensus       555 ~~il~~l~H~nIv~l~g~~~~~-----~~~~lV~Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~  628 (675)
                      .+-|-.+.|.|||+++.|+.+.     .+..++.|||+.|+|..+|++..+ ...+....-.+++.||..||.|||+. .
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~  196 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-D  196 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence            3445566799999999988644     357899999999999999975432 34566677778999999999999996 5


Q ss_pred             CceEecCCCCCCEEEcCCCCeEEe
Q 005825          629 FRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       629 ~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                      ++|+|+++..+-|++..++-+||.
T Consensus       197 PpiihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  197 PPIIHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             CccccCCcchhheeecCCceEEec
Confidence            789999999999999999999985

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.01  E-value=2.1e-05  Score=86.98  Aligned_cols=139  Identities=19%  Similarity=0.274  Sum_probs=88.4

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccC---------------------------HH----------HHHHHHH
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQG---------------------------LE----------EFKNEML  556 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~---------------------------~~----------~f~~E~~  556 (675)
                      +.|+.-+.|.|++|++++|+.||||+-++.-...                           .+          .|..|.+
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            5799999999999999999999999866431110                           00          1333443


Q ss_pred             HHH----hcCCCc------eeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHH-HHh
Q 005825          557 LIA----KLQHRN------LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY-LHH  625 (675)
Q Consensus       557 il~----~l~H~n------Iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~y-LH~  625 (675)
                      -..    .+.|-+      |.+++-.+  ...+.|+||||+|..+.+.-.-.  ...++..   .|+..+.++... +-.
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~--~~gi~~~---~i~~~l~~~~~~qIf~  319 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAID--KRGISPH---DILNKLVEAYLEQIFK  319 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHH--HcCCCHH---HHHHHHHHHHHHHHHh
Confidence            222    234555      22332222  34689999999999887664321  1223333   334434443221 122


Q ss_pred             cCCCceEecCCCCCCEEEcC----CCCeEEeeeccceecCC
Q 005825          626 YSRFRIIHRDLKASNVLLDR----DMNPKISDFGLARMFGG  662 (675)
Q Consensus       626 ~~~~~iiHrDlkp~NILl~~----~~~~kl~DFGla~~~~~  662 (675)
                      .   +++|+|-.|-||++..    ++.+.+-|||+.+.+..
T Consensus       320 ~---GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  320 T---GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             c---CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            3   3999999999999984    67899999999887643

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=98.01  E-value=6.9e-05  Score=66.32  Aligned_cols=100  Identities=24%  Similarity=0.440  Sum_probs=66.5

Q ss_pred             CEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEe-cCCCCCCCCcceEEEeeCCeEEEEeCCCCeEEEeccCCC
Q 005825           39 EKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVA-NRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSE  117 (675)
Q Consensus        39 ~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~A-nr~~pv~~~~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~  117 (675)
                      +.+.+.+|.+.|-|-..|+     |-|. .. ..++||.. +...+.. ..+.+.|..||||||+|..+.++|++...  
T Consensus        12 ~p~~~~s~~~~L~l~~dGn-----Lvl~-~~-~~~~iWss~~t~~~~~-~~~~~~L~~~GNlvl~d~~~~~lW~Sf~~--   81 (114)
T PF01453_consen   12 SPLTSSSGNYTLILQSDGN-----LVLY-DS-NGSVIWSSNNTSGRGN-SGCYLVLQDDGNLVLYDSSGNVLWQSFDY--   81 (114)
T ss_dssp             EEEEECETTEEEEEETTSE-----EEEE-ET-TTEEEEE--S-TTSS--SSEEEEEETTSEEEEEETTSEEEEESTTS--
T ss_pred             cccccccccccceECCCCe-----EEEE-cC-CCCEEEEecccCCccc-cCeEEEEeCCCCEEEEeecceEEEeecCC--
Confidence            4565655888888887765     3333 22 25679999 4333332 45889999999999999999999999433  


Q ss_pred             CCCceEEEcc--CCCEEEEeCCCCCCCcceeeeeccCCc
Q 005825          118 AKNPVAQLRD--DGNLVIRDNSSVNTTENYLWQSFDYPT  154 (675)
Q Consensus       118 ~~~~~a~L~d--~GNlVl~~~~~~~~~~~~lWqSFd~Pt  154 (675)
                      .....+..++  .||++ +..     ...+.|.|=+.|+
T Consensus        82 ptdt~L~~q~l~~~~~~-~~~-----~~~~sw~s~~dps  114 (114)
T PF01453_consen   82 PTDTLLPGQKLGDGNVT-GKN-----DSLTSWSSNTDPS  114 (114)
T ss_dssp             SS-EEEEEET--TSEEE-EES-----TSSEEEESS----
T ss_pred             CccEEEeccCcccCCCc-ccc-----ceEEeECCCCCCC
Confidence            3566777777  89998 653     3568898866663

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.01  E-value=7.4e-05  Score=73.95  Aligned_cols=155  Identities=19%  Similarity=0.231  Sum_probs=99.0

Q ss_pred             cHHHHHHhcCCcceeee---eCCcCceeEEEEEEcCCcEEEEEEecCcCcc---------CHHH---------------H
Q 005825          499 SLASVAAATENFSMECK---LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ---------GLEE---------------F  551 (675)
Q Consensus       499 ~~~~~~~~~~~f~~~~~---IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~---------~~~~---------------f  551 (675)
                      +...+....+...+.+.   |..|--..||+|...++..+|||+.+.....         +..+               .
T Consensus        36 t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~  115 (268)
T COG1718          36 TLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWA  115 (268)
T ss_pred             HHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHH
Confidence            44445555555555444   5567778899998888999999987642111         1111               2


Q ss_pred             HHHHHHHHhcC--CCceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 005825          552 KNEMLLIAKLQ--HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF  629 (675)
Q Consensus       552 ~~E~~il~~l~--H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~  629 (675)
                      ..|+.-|.++.  +-.+.+-+++.    +-.|||||+.......-.   .+...+...+...+..++++.+.-|-...  
T Consensus       116 ~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~---LkDv~~e~~e~~~~~~~~v~~~~~l~~~a--  186 (268)
T COG1718         116 RKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPR---LKDVPLELEEAEGLYEDVVEYMRRLYKEA--  186 (268)
T ss_pred             HHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCC---cccCCcCchhHHHHHHHHHHHHHHHHHhc--
Confidence            24566666653  33444444442    457999999755211111   11112223356667778888888887633  


Q ss_pred             ceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       630 ~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++|+||..-|||+. ++.+.|+|||-|.....+
T Consensus       187 ~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp  219 (268)
T COG1718         187 GLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHP  219 (268)
T ss_pred             CcccccchhhheEEE-CCeEEEEECccccccCCC
Confidence            499999999999999 889999999998876544

>PRK10593 hypothetical protein; Provisional

Probab=97.77  E-value=0.00044  Score=72.32  Aligned_cols=78  Identities=15%  Similarity=0.126  Sum_probs=58.0

Q ss_pred             ceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCC---CceeeEEEEEEeC---CeEEEEEE
Q 005825          511 SMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH---RNLVRILGCCIEQ---GEKILILE  584 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H---~nIv~l~g~~~~~---~~~~lV~E  584 (675)
                      .-.+.||+|..+.||+....++ .+.+|..+.  ......|..|...|+.+..   ..+.+++++|...   +..+||||
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE   93 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQG-NPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLE   93 (297)
T ss_pred             heeeecCCccceeEEEEEcCCC-CEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEe
Confidence            3346799999999999987666 466666432  1133588999999998853   4678889888543   56899999


Q ss_pred             ecCCCCH
Q 005825          585 YMPNKSL  591 (675)
Q Consensus       585 y~~~gsL  591 (675)
                      ++++.++
T Consensus        94 ~i~G~~~  100 (297)
T PRK10593         94 RLRGVSV  100 (297)
T ss_pred             ccCCEec
Confidence            9998764

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.76  E-value=0.00015  Score=73.08  Aligned_cols=140  Identities=16%  Similarity=0.177  Sum_probs=77.3

Q ss_pred             eeeCCcCce-eEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCC---ceeeEEEEEEeC---CeEEEEEEec
Q 005825          514 CKLGEGGFG-PVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHR---NLVRILGCCIEQ---GEKILILEYM  586 (675)
Q Consensus       514 ~~IG~G~fG-~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~---nIv~l~g~~~~~---~~~~lV~Ey~  586 (675)
                      +.|+.|+.. .||+.    +..+.+|..+.  ......+..|.+++..+...   .+.++++.....   ...+++||++
T Consensus         3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~--~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRL----GDDMSVRLPSA--AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEc----CCceEEEcCCc--cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            457766665 58875    23466776443  22345788999999887532   344455544332   2358899999


Q ss_pred             CCCCHHHH------------------hcCCCCcc-c------------C-CHHHHH--HHH-------HHHHHH-HHH-H
Q 005825          587 PNKSLDVF------------------LFDPTKKR-L------------L-GWQARI--GII-------EGIAQG-LLY-L  623 (675)
Q Consensus       587 ~~gsL~~~------------------l~~~~~~~-~------------l-~~~~~~--~i~-------~~ia~~-L~y-L  623 (675)
                      +|.++...                  |+.-.... .            + .|....  .+.       .+.... ++. +
T Consensus        77 ~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  156 (235)
T cd05155          77 EGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALWEAAL  156 (235)
T ss_pred             cCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHHHHHh
Confidence            99776322                  11100000 0            0 111110  000       011111 111 1


Q ss_pred             Hh--cCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          624 HH--YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       624 H~--~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      +.  ..+..++|+|+.|.|||++++....|.||+.|..
T Consensus       157 ~~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         157 RAPWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             cccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            11  1234489999999999999876678999998764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.76  E-value=0.00032  Score=70.58  Aligned_cols=142  Identities=16%  Similarity=0.205  Sum_probs=83.0

Q ss_pred             eeeCCcCceeEEEEEEcC--CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCc-eeeEEEEEEeCCeEEEEEEecCCCC
Q 005825          514 CKLGEGGFGPVYKGRLLN--GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN-LVRILGCCIEQGEKILILEYMPNKS  590 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~--g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~n-Iv~l~g~~~~~~~~~lV~Ey~~~gs  590 (675)
                      +.|..|-...+|+....+  ++.+.+|....... .......|+.++..+.... ..++++...    ..+||||++|.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~-~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE-LIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc-ceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence            567778888999998764  67888887654322 2223357888888885333 444544432    247999999977


Q ss_pred             HHHH-----------------hcCCCCc--------ccC-CHHHHHHHHH----------------------HHHHHHHH
Q 005825          591 LDVF-----------------LFDPTKK--------RLL-GWQARIGIIE----------------------GIAQGLLY  622 (675)
Q Consensus       591 L~~~-----------------l~~~~~~--------~~l-~~~~~~~i~~----------------------~ia~~L~y  622 (675)
                      +...                 ++.....        ... .+.....+..                      .+...+..
T Consensus        79 l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  158 (235)
T cd05157          79 LEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISW  158 (235)
T ss_pred             CCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHH
Confidence            6321                 1111110        011 1211111111                      11111122


Q ss_pred             H----Hhc-CCCceEecCCCCCCEEEcC-CCCeEEeeeccceec
Q 005825          623 L----HHY-SRFRIIHRDLKASNVLLDR-DMNPKISDFGLARMF  660 (675)
Q Consensus       623 L----H~~-~~~~iiHrDlkp~NILl~~-~~~~kl~DFGla~~~  660 (675)
                      |    ... .+..++|+|+.+.|||+++ +..+.|+||..|..-
T Consensus       159 l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~  202 (235)
T cd05157         159 LKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYN  202 (235)
T ss_pred             HHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcC
Confidence            2    111 2345999999999999998 578999999988753

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.75  E-value=0.00044  Score=66.98  Aligned_cols=125  Identities=24%  Similarity=0.377  Sum_probs=90.0

Q ss_pred             CCcceeeeeCCcCc-eeEEEEEEcCCcEEEEEEecC---cCc------------------cCHHHHHHHHHHHHhcC---
Q 005825          508 ENFSMECKLGEGGF-GPVYKGRLLNGEEVAVKRLSS---QSG------------------QGLEEFKNEMLLIAKLQ---  562 (675)
Q Consensus       508 ~~f~~~~~IG~G~f-G~Vy~~~~~~g~~vAvK~l~~---~~~------------------~~~~~f~~E~~il~~l~---  562 (675)
                      .+++.++.||+|.- |.||+++. +|+.+|+|..+.   ...                  ....-|..|.+..++|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            78899999999999 99999998 667999998321   000                  11235888999888885   


Q ss_pred             CCce--eeEEEEEEeC------------------CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHH
Q 005825          563 HRNL--VRILGCCIEQ------------------GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY  622 (675)
Q Consensus       563 H~nI--v~l~g~~~~~------------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~y  622 (675)
                      +.++  |+.+||..-.                  ...-||.||++...            .+.    ..-+.+|.+-|..
T Consensus       116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~----~~~~~~~~~dl~~  179 (207)
T PF13095_consen  116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQ----IRDIPQMLRDLKI  179 (207)
T ss_pred             ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccc----hhHHHHHHHHHHH
Confidence            3456  8999997322                  12357788775543            111    2234567778888


Q ss_pred             HHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       623 LH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      +|..+   |+-+|+|+.|..     .-||+|||.+
T Consensus       180 ~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  180 LHKLG---IVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHCC---eeeccCcccccc-----CCEEEecccC
Confidence            99887   999999999986     4589999864

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.70  E-value=0.00087  Score=65.39  Aligned_cols=128  Identities=17%  Similarity=0.250  Sum_probs=88.3

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCcC----------------ccCHHHHHHHHHHHHhcC------CCceeeEE
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS----------------GQGLEEFKNEMLLIAKLQ------HRNLVRIL  570 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~----------------~~~~~~f~~E~~il~~l~------H~nIv~l~  570 (675)
                      ...||+|+.=.||.-  ++.....||++....                ....+++.+|+.-...+.      +.+|.+++
T Consensus         6 ~~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    6 SDLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             CcccccCCCceEEEC--CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            357999999888854  445567888877544                123466777776655555      88999999


Q ss_pred             EEEEeCCeEEEEEEecCC------CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc
Q 005825          571 GCCIEQGEKILILEYMPN------KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD  644 (675)
Q Consensus       571 g~~~~~~~~~lV~Ey~~~------gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~  644 (675)
                      |+..+....-+|+|.+.+      .+|.+++.+    ..++. .   +...+-+-..||-+.+   |+.+|++|.||++.
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~----~~~~~-~---~~~~L~~f~~~l~~~~---Iv~~dl~~~NIv~~  152 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE----GGLTE-E---LRQALDEFKRYLLDHH---IVIRDLNPHNIVVQ  152 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHc----CCccH-H---HHHHHHHHHHHHHHcC---CeecCCCcccEEEE
Confidence            999998888999998753      356777732    23443 2   3333444456666666   99999999999995


Q ss_pred             CC--C--CeEEee
Q 005825          645 RD--M--NPKISD  653 (675)
Q Consensus       645 ~~--~--~~kl~D  653 (675)
                      ..  +  .+.|+|
T Consensus       153 ~~~~~~~~lvlID  165 (199)
T PF10707_consen  153 RRDSGEFRLVLID  165 (199)
T ss_pred             ecCCCceEEEEEe
Confidence            42  2  466666

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.67  E-value=0.00078  Score=72.75  Aligned_cols=75  Identities=15%  Similarity=0.224  Sum_probs=55.6

Q ss_pred             eeeCCcCceeEEEEEEcCC-cEEEEEEecCc------C-ccCHHHHHHHHHHHHhcC---CCceeeEEEEEEeCCeEEEE
Q 005825          514 CKLGEGGFGPVYKGRLLNG-EEVAVKRLSSQ------S-GQGLEEFKNEMLLIAKLQ---HRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g-~~vAvK~l~~~------~-~~~~~~f~~E~~il~~l~---H~nIv~l~g~~~~~~~~~lV  582 (675)
                      +.||.|.+..||++...+| +.|.||.-.+.      . +...+++..|.+.|..+.   -..+.+++.+  +.+..++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEE
Confidence            6799999999999998777 58999985421      1 234567788888887763   3457777777  44567899


Q ss_pred             EEecCCCC
Q 005825          583 LEYMPNKS  590 (675)
Q Consensus       583 ~Ey~~~gs  590 (675)
                      |||+++..
T Consensus       110 ME~L~~~~  117 (401)
T PRK09550        110 MEDLSDHK  117 (401)
T ss_pred             EecCCCcc
Confidence            99998744

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.56  E-value=0.00038  Score=71.16  Aligned_cols=139  Identities=15%  Similarity=0.091  Sum_probs=79.7

Q ss_pred             eeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCce-eeEEEEEEeCCeEEEEEEecCCCCHHH
Q 005825          515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL-VRILGCCIEQGEKILILEYMPNKSLDV  593 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nI-v~l~g~~~~~~~~~lV~Ey~~~gsL~~  593 (675)
                      .+..|-...+|+... +++.+++|...............|..+++.+....+ .+++....    .++||||++|..+..
T Consensus         3 ~~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~   77 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITL   77 (256)
T ss_pred             cCCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccc
Confidence            355677788998874 566788887654322211235788888888864333 34444432    368999999877642


Q ss_pred             H-----------------hcCCC-CcccCCHHHHH-HHHHH---------HHHHHHHHHhc-----CCCceEecCCCCCC
Q 005825          594 F-----------------LFDPT-KKRLLGWQARI-GIIEG---------IAQGLLYLHHY-----SRFRIIHRDLKASN  640 (675)
Q Consensus       594 ~-----------------l~~~~-~~~~l~~~~~~-~i~~~---------ia~~L~yLH~~-----~~~~iiHrDlkp~N  640 (675)
                      .                 ++... ....++...++ ....+         +.+.+..+-..     .+..++|+|+.|.|
T Consensus        78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N  157 (256)
T TIGR02721        78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN  157 (256)
T ss_pred             ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence            1                 11111 11112221111 11111         11112222111     12358999999999


Q ss_pred             EEEcCCCCeEEeeecccee
Q 005825          641 VLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       641 ILl~~~~~~kl~DFGla~~  659 (675)
                      |++++++ ++|+||..|..
T Consensus       158 il~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       158 LVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             EEEeCCC-CEEEeccccCc
Confidence            9999877 78999998874

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.54  E-value=0.00058  Score=64.11  Aligned_cols=130  Identities=21%  Similarity=0.265  Sum_probs=89.1

Q ss_pred             ceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCcee-eEEEEEEeCCeEEEEEEecCCC
Q 005825          511 SMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV-RILGCCIEQGEKILILEYMPNK  589 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv-~l~g~~~~~~~~~lV~Ey~~~g  589 (675)
                      +..+.|++|.+|.||+|.+. |.++|+|.-+.+  .....+..|+++|..+.-.++. +++.+.    +.++.|||+.|.
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~   97 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGR   97 (201)
T ss_pred             hhhhhhhcccccEEEEeecc-CceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCc
Confidence            34468999999999999985 458888886643  3457789999999999866654 344443    345669999999


Q ss_pred             CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCC-CCCEEEcCCCCeEEeeeccceec
Q 005825          590 SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLK-ASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       590 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk-p~NILl~~~~~~kl~DFGla~~~  660 (675)
                      .|.+.-...      +.++...    ++.+---|-..+   |-|..|. |..++|-.+..+.|+||.-|.+-
T Consensus        98 ~L~~~~~~~------~rk~l~~----vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~k  156 (201)
T COG2112          98 PLGKLEIGG------DRKHLLR----VLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATFK  156 (201)
T ss_pred             chhhhhhcc------cHHHHHH----HHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence            987765211      2233333    333322233333   8888886 66666666669999999999844

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.35  E-value=0.0025  Score=66.59  Aligned_cols=143  Identities=20%  Similarity=0.161  Sum_probs=87.5

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCC--ceeeEEEE------EEeCCeEEEEEE
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHR--NLVRILGC------CIEQGEKILILE  584 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~--nIv~l~g~------~~~~~~~~lV~E  584 (675)
                      .+.|..|....+|+....+ ..+++|+...   ....+...|+.++..+++.  .+.+++..      ....+..++|+|
T Consensus        19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTDS-GRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeCC-CcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            4567778778999987644 4688888764   2345566788888777533  34454442      123446789999


Q ss_pred             ecCCCCHHH----H----------hcC----CC----CcccCCHHHHH----------HHHHHHHHHHHHHHh----cCC
Q 005825          585 YMPNKSLDV----F----------LFD----PT----KKRLLGWQARI----------GIIEGIAQGLLYLHH----YSR  628 (675)
Q Consensus       585 y~~~gsL~~----~----------l~~----~~----~~~~l~~~~~~----------~i~~~ia~~L~yLH~----~~~  628 (675)
                      +++|..+..    .          ++.    ..    ......|....          .....+..++.++.+    ..+
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            999977532    1          010    00    01112332211          011223344555553    223


Q ss_pred             CceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          629 FRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       629 ~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ..++|+|+.|.|||++++..+.|.||+.|..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            4599999999999999987789999998763

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.20  E-value=0.0022  Score=67.19  Aligned_cols=142  Identities=25%  Similarity=0.313  Sum_probs=84.9

Q ss_pred             eeeCCcCceeEEEEEEcC-------CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCce-eeEEEEEEeCCeEEEEEEe
Q 005825          514 CKLGEGGFGPVYKGRLLN-------GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL-VRILGCCIEQGEKILILEY  585 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~-------g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nI-v~l~g~~~~~~~~~lV~Ey  585 (675)
                      +.|..|--..+|+....+       ++.+++|+..... ........|.+++..+....+ .++++.+..    .+|+||
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence            456667677899887654       4788888865432 233456778888888753333 355555532    358999


Q ss_pred             cCCCCHHHH-----------------hcCCCCc--c----cC--CHHHHHH--------------------------HHH
Q 005825          586 MPNKSLDVF-----------------LFDPTKK--R----LL--GWQARIG--------------------------IIE  614 (675)
Q Consensus       586 ~~~gsL~~~-----------------l~~~~~~--~----~l--~~~~~~~--------------------------i~~  614 (675)
                      ++|..+...                 +|.....  .    ..  -|.....                          +..
T Consensus        79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (302)
T cd05156          79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE  158 (302)
T ss_pred             eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence            998876431                 1111100  0    01  0111100                          111


Q ss_pred             HHHHHHHHHHh------cCCCceEecCCCCCCEEEcCC----CCeEEeeeccceec
Q 005825          615 GIAQGLLYLHH------YSRFRIIHRDLKASNVLLDRD----MNPKISDFGLARMF  660 (675)
Q Consensus       615 ~ia~~L~yLH~------~~~~~iiHrDlkp~NILl~~~----~~~kl~DFGla~~~  660 (675)
                      .+...+.+|..      ..+..++|+|+.|.|||++++    +.++|+||..|..-
T Consensus       159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~  214 (302)
T cd05156         159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYN  214 (302)
T ss_pred             HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCC
Confidence            22233344432      245568999999999999985    88999999998753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK05231 homoserine kinase; Provisional

Probab=97.19  E-value=0.0074  Score=63.76  Aligned_cols=141  Identities=19%  Similarity=0.171  Sum_probs=77.2

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCC--CceeeEEEE------EEeCCeEEEEEEe
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH--RNLVRILGC------CIEQGEKILILEY  585 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H--~nIv~l~g~------~~~~~~~~lV~Ey  585 (675)
                      +.|..|....+|+....+| .+++|+....   ..+....|+.++..|..  -.+.+.+..      ....+..++++||
T Consensus        28 ~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~---~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~  103 (319)
T PRK05231         28 KGIAEGIENSNFFLTTTQG-EYVLTLFERL---TAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF  103 (319)
T ss_pred             chhccccccceEEEEeCCC-cEEEEEeccC---ChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence            4566777788999887655 6888887521   22333445555555532  123333321      1234567899999


Q ss_pred             cCCCCHHH-----H---------hcCCC--------CcccCCH-HHHHHH------------H-HHHHHHHHHHHhc---
Q 005825          586 MPNKSLDV-----F---------LFDPT--------KKRLLGW-QARIGI------------I-EGIAQGLLYLHHY---  626 (675)
Q Consensus       586 ~~~gsL~~-----~---------l~~~~--------~~~~l~~-~~~~~i------------~-~~ia~~L~yLH~~---  626 (675)
                      ++|..+..     .         ++...        ....+.| .....-            . ..+...++.+...   
T Consensus       104 l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  183 (319)
T PRK05231        104 LEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWP  183 (319)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccc
Confidence            99975421     1         11100        0011112 211111            1 1111122333211   


Q ss_pred             -CCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          627 -SRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       627 -~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                       -+..++|+|+.|.|||++.+...-|+||+.+.
T Consensus       184 ~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        184 ALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence             24469999999999999977666899999885

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.11  E-value=0.0092  Score=62.72  Aligned_cols=143  Identities=21%  Similarity=0.216  Sum_probs=83.4

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCC--ceeeEEEEE------EeCCeEEEEEE
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHR--NLVRILGCC------IEQGEKILILE  584 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~--nIv~l~g~~------~~~~~~~lV~E  584 (675)
                      .+.++.|--..+|+....++ .+.+|+.....  ..++...|+.++..|...  .+.+++...      ...+..++++|
T Consensus        27 i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e  103 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE  103 (307)
T ss_pred             ccccCCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence            34567777788999876555 57778765421  234555677777776422  244444421      12356789999


Q ss_pred             ecCCCCHHH----H----------hcCC------CC---cccCCHHHHH------------HHHHHHHHHHHHHHh----
Q 005825          585 YMPNKSLDV----F----------LFDP------TK---KRLLGWQARI------------GIIEGIAQGLLYLHH----  625 (675)
Q Consensus       585 y~~~gsL~~----~----------l~~~------~~---~~~l~~~~~~------------~i~~~ia~~L~yLH~----  625 (675)
                      |++|..+..    .          ++..      ..   .....|....            .....+.+.++++..    
T Consensus       104 ~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~  183 (307)
T TIGR00938       104 FLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPR  183 (307)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhh
Confidence            999865421    0          1110      00   0011222111            011223345555543    


Q ss_pred             cCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       626 ~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      ..+..++|+|+.+.||++++++.+.|.||+.+.
T Consensus       184 ~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       184 DLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             cCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            234569999999999999998877999999884

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PLN02236 choline kinase

Probab=96.97  E-value=0.0072  Score=64.61  Aligned_cols=142  Identities=16%  Similarity=0.227  Sum_probs=83.7

Q ss_pred             eeeCCcCceeEEEEEEcC-----CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCcee-eEEEEEEeCCeEEEEEEecC
Q 005825          514 CKLGEGGFGPVYKGRLLN-----GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV-RILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~-----g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv-~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      +.|-.|-.-.+|+....+     ++.|.+|........... -.+|..++..+...++. ++++.+..+    .|+||++
T Consensus        42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~  116 (344)
T PLN02236         42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIH  116 (344)
T ss_pred             EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeC
Confidence            456557778899987543     367888877654333333 36788888888654444 556665332    5899998


Q ss_pred             CCCHHHH-----------------hcCCC-C--cccCCHHHHHHHHH-----------------HHHHHHHHHH----h-
Q 005825          588 NKSLDVF-----------------LFDPT-K--KRLLGWQARIGIIE-----------------GIAQGLLYLH----H-  625 (675)
Q Consensus       588 ~gsL~~~-----------------l~~~~-~--~~~l~~~~~~~i~~-----------------~ia~~L~yLH----~-  625 (675)
                      +.+|...                 +|... .  .....|.+...+..                 .+...+..|.    . 
T Consensus       117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~  196 (344)
T PLN02236        117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD  196 (344)
T ss_pred             CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence            8776421                 11111 0  10111222222221                 1112222222    1 


Q ss_pred             cCCCceEecCCCCCCEEEcC-CCCeEEeeeccceec
Q 005825          626 YSRFRIIHRDLKASNVLLDR-DMNPKISDFGLARMF  660 (675)
Q Consensus       626 ~~~~~iiHrDlkp~NILl~~-~~~~kl~DFGla~~~  660 (675)
                      ..+..++|+|+++.|||+++ ++.++|+||..|..-
T Consensus       197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~  232 (344)
T PLN02236        197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYN  232 (344)
T ss_pred             CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcccc
Confidence            23446899999999999986 478999999998754

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.93  E-value=0.005  Score=63.65  Aligned_cols=32  Identities=25%  Similarity=0.450  Sum_probs=26.6

Q ss_pred             CceEecCCCCCCEEEcCCCC-eEEeeeccceec
Q 005825          629 FRIIHRDLKASNVLLDRDMN-PKISDFGLARMF  660 (675)
Q Consensus       629 ~~iiHrDlkp~NILl~~~~~-~kl~DFGla~~~  660 (675)
                      ..++|+|++|.|||+++++. .-|.||+.|..-
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG  217 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKVG  217 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence            35899999999999997555 579999998753

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=96.71  E-value=0.0017  Score=52.42  Aligned_cols=49  Identities=18%  Similarity=0.323  Sum_probs=34.8

Q ss_pred             eccCCCCccceeccccCCHHHHHHHHhccCceeeeecccccCCceeEEeccc
Q 005825          347 DNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGE  398 (675)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~C~~~Cl~nCsC~A~~~~~~~~~~~C~~w~~~  398 (675)
                      +++.++.++.... ...+.++|++.|+.+|+|.||.|...  ...|+++...
T Consensus        10 ~~~~~~g~d~~~~-~~~s~~~Cq~~C~~~~~C~afT~~~~--~~~C~lk~~~   58 (73)
T cd01100          10 SNVDFRGGDLSTV-FASSAEQCQAACTADPGCLAFTYNTK--SKKCFLKSSE   58 (73)
T ss_pred             CCCccccCCccee-ecCCHHHHHHHcCCCCCceEEEEECC--CCeEEcccCC
Confidence            4555555443322 24589999999999999999999742  3569987664

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.69  E-value=0.019  Score=59.49  Aligned_cols=76  Identities=17%  Similarity=0.234  Sum_probs=49.0

Q ss_pred             cceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC---CCceeeEEEEEEeCCeEEEEEEec
Q 005825          510 FSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ---HRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~---H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .+..+.++.|....+|+.. .+++.+.||.-..   .....|..|..-|+.|.   --.+.+++++....+..+|||||+
T Consensus        19 i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l   94 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL   94 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE-TTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred             eeeeEecCCCChhheEEEE-CCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence            3445678989999999987 5678899998762   33467888888777773   455778999888777789999999


Q ss_pred             CCC
Q 005825          587 PNK  589 (675)
Q Consensus       587 ~~g  589 (675)
                      +.+
T Consensus        95 ~~~   97 (288)
T PF03881_consen   95 EMG   97 (288)
T ss_dssp             ---
T ss_pred             cCC
Confidence            877

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.61  E-value=0.00025  Score=82.11  Aligned_cols=149  Identities=18%  Similarity=0.193  Sum_probs=102.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ..+.|.+.+-+..|+++.++.++-.. +...++|.....   .....+....+-.++-..+||-+++..--+.......|
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L  881 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL  881 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence            45677777888899999999875432 333333333211   12223333444444444566777766655566778899


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +++|..+++|...|+...   ..+.......+..+.++++|||...   +.|||++|.|+|...+++.+++|||+....
T Consensus       882 ~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v  954 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKV  954 (1205)
T ss_pred             hhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccc
Confidence            999999999998885422   2333333344555889999999875   899999999999999999999999965543

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=96.60  E-value=0.0022  Score=65.81  Aligned_cols=135  Identities=15%  Similarity=0.159  Sum_probs=91.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEec----------Cc----------CccCH--HHHHHHHHHHHhcC-CC
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLS----------SQ----------SGQGL--EEFKNEMLLIAKLQ-HR  564 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~----------~~----------~~~~~--~~f~~E~~il~~l~-H~  564 (675)
                      .-+++.+.||-|--+.||.+-..+|++.++|.=.          .+          +...+  -....|+..|+.+. |.
T Consensus        92 ~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g  171 (465)
T KOG2268|consen   92 SVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG  171 (465)
T ss_pred             hhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence            3567889999999999999999889999988311          00          01111  12446888888885 32


Q ss_pred             -ceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE
Q 005825          565 -NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL  643 (675)
Q Consensus       565 -nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl  643 (675)
                       .+.+.+++    +..++|||++.+-.|...-+      ..+..   .+...+..-+--|..++   +||+|..--||++
T Consensus       172 fpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~------v~d~~---~ly~~lm~~Iv~la~~G---lIHgDFNEFNimv  235 (465)
T KOG2268|consen  172 FPVPKPIDH----NRHCVVMELVDGYPLRQVRH------VEDPP---TLYDDLMGLIVRLANHG---LIHGDFNEFNIMV  235 (465)
T ss_pred             CCCCCcccc----cceeeHHHhhcccceeeeee------cCChH---HHHHHHHHHHHHHHHcC---ceecccchheeEE
Confidence             34445444    45689999999887754331      11222   23333334444555666   9999999999999


Q ss_pred             cCCCCeEEeeeccce
Q 005825          644 DRDMNPKISDFGLAR  658 (675)
Q Consensus       644 ~~~~~~kl~DFGla~  658 (675)
                      +++..++++||--..
T Consensus       236 ~dd~~i~vIDFPQmv  250 (465)
T KOG2268|consen  236 KDDDKIVVIDFPQMV  250 (465)
T ss_pred             ecCCCEEEeechHhh
Confidence            999999999997443

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.59  E-value=0.026  Score=59.02  Aligned_cols=144  Identities=16%  Similarity=0.234  Sum_probs=82.4

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecC--cCccCHHHHHHHHHHHHhcCC--CceeeEEEEEEeCC--eEEEEEEecC
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQH--RNLVRILGCCIEQG--EKILILEYMP  587 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~H--~nIv~l~g~~~~~~--~~~lV~Ey~~  587 (675)
                      +.+..|---.+|..... ++++.++ ...  ..........+|..+|+.+.-  .-+.+.++.|.++.  ..+.||||++
T Consensus        31 ~~~~~G~sn~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~ve  108 (321)
T COG3173          31 EEISGGWSNDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVE  108 (321)
T ss_pred             eeccCCcccceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEec
Confidence            44433332333333332 6777777 331  122344566778888888753  44556778887766  6799999999


Q ss_pred             CCCHHHHhcCC-----------------------------------CCcccCCHHHHHHHHH--------HHHHHHHHHH
Q 005825          588 NKSLDVFLFDP-----------------------------------TKKRLLGWQARIGIIE--------GIAQGLLYLH  624 (675)
Q Consensus       588 ~gsL~~~l~~~-----------------------------------~~~~~l~~~~~~~i~~--------~ia~~L~yLH  624 (675)
                      |..+...+...                                   ...+.-.|......+.        ....-..+|+
T Consensus       109 Ge~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~  188 (321)
T COG3173         109 GEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLE  188 (321)
T ss_pred             ceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHH
Confidence            84332111000                                   0000111211111000        1222344554


Q ss_pred             hc-----CCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          625 HY-----SRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       625 ~~-----~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++     ++..++|+|+.+.||+++.+..+-|.||+++..
T Consensus       189 ~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         189 ANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             hcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence            32     335699999999999999998899999999875

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.30  E-value=0.04  Score=58.46  Aligned_cols=73  Identities=15%  Similarity=0.203  Sum_probs=49.0

Q ss_pred             eeCCcCceeEEEEEEcCC-cEEEEEEecC-------cCccCHHHHHHHHHHHHhcC--CC-ceeeEEEEEEeCCeEEEEE
Q 005825          515 KLGEGGFGPVYKGRLLNG-EEVAVKRLSS-------QSGQGLEEFKNEMLLIAKLQ--HR-NLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~~~~g-~~vAvK~l~~-------~~~~~~~~f~~E~~il~~l~--H~-nIv~l~g~~~~~~~~~lV~  583 (675)
                      .||.|....||++..+++ +.|+||.-.+       .-+...++-.-|...|....  -| .+.+++.+  +++...+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence            579999999999998654 6899996432       11334556667777776653  23 35555544  455667999


Q ss_pred             EecCCC
Q 005825          584 EYMPNK  589 (675)
Q Consensus       584 Ey~~~g  589 (675)
                      |+++..
T Consensus        80 EdL~~~   85 (370)
T TIGR01767        80 EDLSHH   85 (370)
T ss_pred             hhCccc
Confidence            999653

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.17  E-value=0.00071  Score=74.72  Aligned_cols=142  Identities=17%  Similarity=0.090  Sum_probs=96.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCc-eeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN-LVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~n-Iv~l~g~~~~~~~~~lV~Ey  585 (675)
                      +..+...+.++++++++++|.+-.-.+....+.+...     .....++++|.+++||| .++.++-+..++..++++++
T Consensus       241 ~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i  315 (829)
T KOG0576|consen  241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRI  315 (829)
T ss_pred             ccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhh
Confidence            3444445678899999999987533334445555432     45567899999999999 77777777777788999999


Q ss_pred             cCCC-CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNK-SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ...+ +-....  ......+..-+...+.+.-+++|+|||+..   -+|+|    ||+..+ +..|..||+.+..+.+.
T Consensus       316 ~s~~rs~~~~~--~~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~  384 (829)
T KOG0576|consen  316 CSTGRSSALEM--TVSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRT  384 (829)
T ss_pred             hcCCccccccC--ChhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCcc
Confidence            9887 211111  011112333334455666678899999754   58998    787766 68999999998877544

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.08  E-value=0.051  Score=57.36  Aligned_cols=136  Identities=24%  Similarity=0.303  Sum_probs=79.9

Q ss_pred             CceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCc------eeeEEEE----EEeCCeEEEEEEecCCC
Q 005825          520 GFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN------LVRILGC----CIEQGEKILILEYMPNK  589 (675)
Q Consensus       520 ~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~n------Iv~l~g~----~~~~~~~~lV~Ey~~~g  589 (675)
                      .-..+|+....+|+. ++|..+..  ....+...|+..|..+.-..      |.++-|-    ...+...+-++||++|.
T Consensus        37 ~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~  113 (331)
T COG2334          37 EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGR  113 (331)
T ss_pred             ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCc
Confidence            456788888877776 77777654  44556666777776663211      2222222    12223678899999998


Q ss_pred             CHHH-H--------------hc----C-----CCCcccCCHHH-------------HHHHHHHHHHHHHHHHhc----CC
Q 005825          590 SLDV-F--------------LF----D-----PTKKRLLGWQA-------------RIGIIEGIAQGLLYLHHY----SR  628 (675)
Q Consensus       590 sL~~-~--------------l~----~-----~~~~~~l~~~~-------------~~~i~~~ia~~L~yLH~~----~~  628 (675)
                      .+.. .              |+    +     ........|..             ......++...++.+.+.    -+
T Consensus       114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp  193 (331)
T COG2334         114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP  193 (331)
T ss_pred             CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence            8872 1              01    0     11111233430             001222344444444431    12


Q ss_pred             C---ceEecCCCCCCEEEcCCCC-eEEeeeccce
Q 005825          629 F---RIIHRDLKASNVLLDRDMN-PKISDFGLAR  658 (675)
Q Consensus       629 ~---~iiHrDlkp~NILl~~~~~-~kl~DFGla~  658 (675)
                      .   .+||+|+.|.||+++.+.. +.+.||+-|.
T Consensus       194 ~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         194 ALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             cccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence            2   2999999999999999885 8999999876

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.99  E-value=0.13  Score=55.73  Aligned_cols=73  Identities=11%  Similarity=0.060  Sum_probs=49.8

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCc----C---ccCHHHHHHHHHHHHhcC---CCceeeEEEEEEeCCeEEEE
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ----S---GQGLEEFKNEMLLIAKLQ---HRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~----~---~~~~~~f~~E~~il~~l~---H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .+.||.|....||+.... +..+.||+-...    .   +....+-..|...|..+.   ...+.+++.++.  +..+++
T Consensus        37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv  113 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG  113 (418)
T ss_pred             EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence            468999999999998864 456889975421    1   113344444566665543   357888888876  456888


Q ss_pred             EEecCC
Q 005825          583 LEYMPN  588 (675)
Q Consensus       583 ~Ey~~~  588 (675)
                      ||++++
T Consensus       114 ME~L~~  119 (418)
T PLN02756        114 MRYLEP  119 (418)
T ss_pred             EeecCC
Confidence            999977

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.71  E-value=0.18  Score=52.89  Aligned_cols=29  Identities=24%  Similarity=0.328  Sum_probs=25.5

Q ss_pred             CceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          629 FRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       629 ~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      ..++|+|+.+.||+++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            46899999999999988 678999999764

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=95.66  E-value=0.087  Score=56.00  Aligned_cols=142  Identities=17%  Similarity=0.241  Sum_probs=80.3

Q ss_pred             eeeCCcCceeEEEEEEcC----CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCcee-eEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV-RILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv-~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      +.|..|=-..+|+....+    +..|.+|........ .-.-.+|..+++.+...++. ++++++. .+   +|.||+++
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---~i~~fi~g   94 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVFG-NG---MIQSFINA   94 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEeC-Cc---EeehhhcC
Confidence            445556667788886543    237888877653332 22346788888888655553 5566653 22   48999988


Q ss_pred             CCHHHH-----------------hcCCC-C--cccCCHHHHHHHHHH----------------------HHHHHHHHHh-
Q 005825          589 KSLDVF-----------------LFDPT-K--KRLLGWQARIGIIEG----------------------IAQGLLYLHH-  625 (675)
Q Consensus       589 gsL~~~-----------------l~~~~-~--~~~l~~~~~~~i~~~----------------------ia~~L~yLH~-  625 (675)
                      ..|..-                 +|... .  ....-|.....+..+                      +.+-+..+.+ 
T Consensus        95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~  174 (330)
T PLN02421         95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI  174 (330)
T ss_pred             CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence            766321                 11111 0  111122222222111                      1112222221 


Q ss_pred             ----cCCCceEecCCCCCCEEEcC-CCCeEEeeeccceec
Q 005825          626 ----YSRFRIIHRDLKASNVLLDR-DMNPKISDFGLARMF  660 (675)
Q Consensus       626 ----~~~~~iiHrDlkp~NILl~~-~~~~kl~DFGla~~~  660 (675)
                          ..+.-+.|+|+.+.|||+++ ++.++++||..|..-
T Consensus       175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n  214 (330)
T PLN02421        175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS  214 (330)
T ss_pred             hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence                12234799999999999975 578999999988753

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=95.65  E-value=0.064  Score=56.30  Aligned_cols=143  Identities=17%  Similarity=0.183  Sum_probs=92.5

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCc-------Cc--cCHHH-----------------HHHHHHHHHhcCCCce
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ-------SG--QGLEE-----------------FKNEMLLIAKLQHRNL  566 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~-------~~--~~~~~-----------------f~~E~~il~~l~H~nI  566 (675)
                      ...|..|--.-||.+.-.+|..+|||+.+..       ..  .+.-+                 ...|++-|.+|+...|
T Consensus       149 nGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGI  228 (520)
T KOG2270|consen  149 NGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGI  228 (520)
T ss_pred             ccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence            3567888889999999889999999976521       00  00011                 2246666666654433


Q ss_pred             eeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC
Q 005825          567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD  646 (675)
Q Consensus       567 v~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~  646 (675)
                      .----...  ....|||+|+....-..-   ..+...+....+..+..++++-|.-|.+.+  +++|.||.--|+|+. +
T Consensus       229 P~PePIlL--k~hVLVM~FlGrdgw~aP---kLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyh-d  300 (520)
T KOG2270|consen  229 PCPEPILL--KNHVLVMEFLGRDGWAAP---KLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYH-D  300 (520)
T ss_pred             CCCCceee--ecceEeeeeccCCCCcCc---ccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEE-C
Confidence            21111100  234789999964322111   122334555667778888888888888877  599999999999985 4


Q ss_pred             CCeEEeeeccceecCCC
Q 005825          647 MNPKISDFGLARMFGGD  663 (675)
Q Consensus       647 ~~~kl~DFGla~~~~~~  663 (675)
                      |.+.|+|.+-+.-...+
T Consensus       301 G~lyiIDVSQSVE~DHP  317 (520)
T KOG2270|consen  301 GKLYIIDVSQSVEHDHP  317 (520)
T ss_pred             CEEEEEEccccccCCCh
Confidence            58999998877655433

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=95.46  E-value=0.028  Score=55.55  Aligned_cols=30  Identities=33%  Similarity=0.552  Sum_probs=21.8

Q ss_pred             ceEecCCCCCCEEE-cCCCCeEEeeecccee
Q 005825          630 RIIHRDLKASNVLL-DRDMNPKISDFGLARM  659 (675)
Q Consensus       630 ~iiHrDlkp~NILl-~~~~~~kl~DFGla~~  659 (675)
                      -+.|+|+.|.|||+ +.++.++++||..|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            48999999999999 8899999999998874

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PRK06148 hypothetical protein; Provisional

Probab=95.34  E-value=0.19  Score=61.38  Aligned_cols=142  Identities=20%  Similarity=0.264  Sum_probs=77.9

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC--CCc--eeeEEE--------EEEe-CC--e
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ--HRN--LVRILG--------CCIE-QG--E  578 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~--H~n--Iv~l~g--------~~~~-~~--~  578 (675)
                      +.|+ |..-.+|+.+..+++.+++|+.....  .......|..+|..|.  ++.  +.+++-        .... .+  .
T Consensus        31 ~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~--~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~  107 (1013)
T PRK06148         31 TPLD-GERDLNFRLTTDDGADYILKIVNPSE--PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR  107 (1013)
T ss_pred             eecC-CcCCceEEEEeCCCCeEEEEEcCCcc--chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence            4454 45678899888788899999987542  2234444555554442  122  222221        1111 22  4


Q ss_pred             EEEEEEecCCCCHHHH-------h----------c----C---CCCcccCCHHH-----------------HHHHHHHHH
Q 005825          579 KILILEYMPNKSLDVF-------L----------F----D---PTKKRLLGWQA-----------------RIGIIEGIA  617 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~-------l----------~----~---~~~~~~l~~~~-----------------~~~i~~~ia  617 (675)
                      .+-+++|++|..+.+.       +          +    +   ....+.+.|..                 ...++.++.
T Consensus       108 ~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~  187 (1013)
T PRK06148        108 LLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFL  187 (1013)
T ss_pred             EEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHH
Confidence            5678999999877551       0          0    0   01112223321                 112222222


Q ss_pred             HHHH----HHHhcCCCceEecCCCCCCEEEcCCC--CeE-Eeeeccce
Q 005825          618 QGLL----YLHHYSRFRIIHRDLKASNVLLDRDM--NPK-ISDFGLAR  658 (675)
Q Consensus       618 ~~L~----yLH~~~~~~iiHrDlkp~NILl~~~~--~~k-l~DFGla~  658 (675)
                      ....    .....-+..+||+|+.+.|||++.+.  ++. |+|||.+.
T Consensus       188 ~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        188 ARFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             HHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            2221    11122345699999999999999875  554 99999875

>PRK12396 5-methylribose kinase; Reviewed

Probab=95.23  E-value=0.1  Score=56.17  Aligned_cols=74  Identities=11%  Similarity=0.106  Sum_probs=50.9

Q ss_pred             eeeeCCcCceeEEEEEEcC-CcEEEEEEecC------cCccCHHHHHHHHHHHHhcC--CC-ceeeEEEEEEeCCeEEEE
Q 005825          513 ECKLGEGGFGPVYKGRLLN-GEEVAVKRLSS------QSGQGLEEFKNEMLLIAKLQ--HR-NLVRILGCCIEQGEKILI  582 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~------~~~~~~~~f~~E~~il~~l~--H~-nIv~l~g~~~~~~~~~lV  582 (675)
                      .+.||-|.-.-||++...+ ++.|+||.-.+      .-+...++-.-|...|+...  -| .+.+++.+  +++...+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence            3689999999999999753 56799996432      11345667777777777653  23 45556554  45566789


Q ss_pred             EEecCC
Q 005825          583 LEYMPN  588 (675)
Q Consensus       583 ~Ey~~~  588 (675)
                      ||+++.
T Consensus       112 MEdL~~  117 (409)
T PRK12396        112 MEDLSD  117 (409)
T ss_pred             HHhCcc
Confidence            999965

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	675
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-31
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		8e-31
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		7e-26
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		8e-26
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-23
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-23
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-23
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-22
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		7e-18
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		8e-18
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		1e-17
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		4e-17
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		4e-17
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		5e-17
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		7e-17
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-16
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-16
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-16
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		5e-16
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		6e-16
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-16
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-15
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-15
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-15
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-15
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-15
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-15
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-15
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-15
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-15
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-15
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-15
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		2e-15
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		2e-15
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		3e-15
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-15
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-15
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		3e-15
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		4e-15
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		4e-15
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		4e-15
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		4e-15
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-15
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		4e-15
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		4e-15
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		4e-15
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		5e-15
2pl0_A	289	Lck Bound To Imatinib Length = 289		5e-15
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		5e-15
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		5e-15
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		5e-15
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		6e-15
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		6e-15
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		7e-15
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		7e-15
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		8e-15
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		8e-15
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		9e-15
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		9e-15
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		9e-15
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		9e-15
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		9e-15
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		9e-15
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		1e-14
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		1e-14
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-14
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		1e-14
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		1e-14
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-14
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-14
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-14
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-14
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		1e-14
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		1e-14
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		1e-14
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		1e-14
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-14
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		1e-14
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-14
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-14
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-14
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-14
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-14
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-14
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-14
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-14
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-14
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-14
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		2e-14
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		2e-14
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		2e-14
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		2e-14
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		3e-14
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		3e-14
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		3e-14
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		3e-14
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-14
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-14
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		3e-14
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		3e-14
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-14
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		3e-14
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		3e-14
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		3e-14
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		3e-14
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-14
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		3e-14
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		3e-14
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		3e-14
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		3e-14
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		3e-14
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-14
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		3e-14
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		3e-14
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-14
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-14
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-14
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-14
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		3e-14
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		3e-14
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-14
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-14
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		4e-14
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		4e-14
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		4e-14
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		4e-14
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		4e-14
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		4e-14
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		4e-14
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		4e-14
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		4e-14
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		4e-14
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		4e-14
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		4e-14
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		4e-14
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		4e-14
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		4e-14
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		4e-14
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		4e-14
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		4e-14
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		4e-14
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		4e-14
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		5e-14
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		5e-14
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		5e-14
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-14
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		5e-14
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		6e-14
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		7e-14
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		7e-14
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		8e-14
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		8e-14
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		8e-14
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		8e-14
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		8e-14
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		9e-14
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-13
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-13
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		1e-13
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-13
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-13
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-13
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-13
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-13
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		2e-13
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-13
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-13
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-13
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-13
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		2e-13
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-13
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-13
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-13
4h58_A	275	Braf In Complex With Compound 3 Length = 275		3e-13
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		3e-13
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		3e-13
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-13
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		4e-13
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		4e-13
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		4e-13
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-13
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-13
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		4e-13
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		4e-13
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		4e-13
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		4e-13
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		4e-13
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		5e-13
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		5e-13
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		5e-13
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		5e-13
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-13
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		5e-13
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-13
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		6e-13
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		6e-13
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		6e-13
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-13
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		6e-13
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		6e-13
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-13
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		7e-13
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		8e-13
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		8e-13
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		8e-13
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		9e-13
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		9e-13
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-12
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		1e-12
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-12
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-12
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-12
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		1e-12
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-12
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		1e-12
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		1e-12
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		1e-12
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		1e-12
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-12
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		1e-12
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		1e-12
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		1e-12
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		1e-12
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-12
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		1e-12
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		1e-12
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-12
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-12
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-12
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-12
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-12
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-12
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		3e-12
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		3e-12
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		3e-12
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-12
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		3e-12
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-12
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-12
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-12
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-12
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		4e-12
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		4e-12
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		4e-12
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		4e-12
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		5e-12
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-12
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		5e-12
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		6e-12
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		6e-12
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		6e-12
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		6e-12
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		6e-12
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		6e-12
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		6e-12
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		6e-12
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		6e-12
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		6e-12
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		7e-12
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		7e-12
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		7e-12
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		8e-12
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		9e-12
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		9e-12
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		9e-12
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		1e-11
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		1e-11
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		1e-11
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-11
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-11
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		1e-11
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		1e-11
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-11
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-11
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-11
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-11
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		2e-11
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		2e-11
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		2e-11
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-11
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-11
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-11
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		2e-11
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		2e-11
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		2e-11
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-11
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		2e-11
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-11
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		3e-11
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-11
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		4e-11
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		4e-11
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		4e-11
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-11
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		4e-11
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		4e-11
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-11
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		4e-11
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		4e-11
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		4e-11
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		5e-11
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		5e-11
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		5e-11
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		5e-11
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		5e-11
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		6e-11
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		7e-11
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		7e-11
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		7e-11
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		7e-11
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		7e-11
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		7e-11
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		8e-11
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		8e-11
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		8e-11
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		8e-11
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		8e-11
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		9e-11
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		9e-11
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		9e-11
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-10
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-10
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		1e-10
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-10
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-10
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		1e-10
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-10
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-10
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-10
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		2e-10
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-10
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-10
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-10
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-10
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-10
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-10
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		2e-10
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-10
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-10
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		3e-10
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-10
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		3e-10
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-10
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		3e-10
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		3e-10
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		3e-10
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		3e-10
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-10
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		3e-10
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-10
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		3e-10
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		3e-10
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		3e-10
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-10
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-10
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-10
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		3e-10
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		3e-10
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-10
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		4e-10
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		4e-10
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		4e-10
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		4e-10
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-10
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		5e-10
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		5e-10
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		5e-10
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		5e-10
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		6e-10
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		6e-10
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		7e-10
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		7e-10
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		7e-10
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		8e-10
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		9e-10
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		9e-10
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-09
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		1e-09
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-09
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		1e-09
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-09
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-09
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		1e-09
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		1e-09
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		1e-09
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		1e-09
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-09
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		1e-09
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-09
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-09
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		1e-09
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-09
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		2e-09
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		2e-09
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-09
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		2e-09
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-09
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		2e-09
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		2e-09
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		2e-09
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		2e-09
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		2e-09
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-09
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		2e-09
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-09
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		2e-09
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-09
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		2e-09
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		2e-09
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-09
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-09
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		2e-09
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-09
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		3e-09
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		3e-09
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		3e-09
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-09
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		3e-09
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		3e-09
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		3e-09
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-09
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		3e-09
3b2t_A	311	Structure Of Phosphotransferase Length = 311		3e-09
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		3e-09
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-09
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		4e-09
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		4e-09
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-09
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		4e-09
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		4e-09
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		4e-09
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		4e-09
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		5e-09
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		5e-09
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		5e-09
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		5e-09
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		6e-09
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		6e-09
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		6e-09
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-09
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-09
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		7e-09
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		7e-09
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		7e-09
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		7e-09
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		7e-09
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		7e-09
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		7e-09
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		7e-09
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		7e-09
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		7e-09
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		7e-09
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		8e-09
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		8e-09
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		8e-09
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		8e-09
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		8e-09
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		8e-09
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		8e-09
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		9e-09
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		9e-09
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		9e-09
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		9e-09
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		9e-09
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		9e-09
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		9e-09
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		9e-09
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		9e-09
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		9e-09
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		9e-09
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		9e-09
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-08
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-08
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-08
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-08
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-08
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-08
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-08
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		1e-08
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-08
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-08
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-08
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-08
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-08
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-08
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-08
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-08
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-08
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-08
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-08
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-08
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-08
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		1e-08
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		1e-08
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-08
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		1e-08
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-08
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-08
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-08
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-08
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		1e-08
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-08
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-08
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-08
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-08
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-08
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-08
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-08
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-08
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-08
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-08
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-08
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-08
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-08
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		3e-08
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		3e-08
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-08
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-08
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		3e-08
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		4e-08
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		4e-08
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		4e-08
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		5e-08
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		5e-08
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		6e-08
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		6e-08
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		6e-08
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		6e-08
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		6e-08
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		6e-08
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		7e-08
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		7e-08
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		7e-08
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		8e-08
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		8e-08
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		8e-08
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		8e-08
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		8e-08
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		8e-08
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		8e-08
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		8e-08
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		8e-08
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		9e-08
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		9e-08
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-07
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		1e-07
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		1e-07
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-07
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		1e-07
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-07
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-07
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-07
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-07
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-07
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-07
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-07
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-07
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-07
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-07
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		2e-07
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-07
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-07
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-07
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-07
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-07
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-07
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-07
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-07
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		2e-07
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		2e-07
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		2e-07
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-07
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-07
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-07
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-07
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-07
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-07
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-07
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-07
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-07
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-07
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-07
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-07
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-07
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-07
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-07
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-07
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-07
3soa_A	444	Full-Length Human Camkii Length = 444		2e-07
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-07
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		2e-07
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-07
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		2e-07
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-07
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-07
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-07
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-07
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-07
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		2e-07
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		3e-07
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		3e-07
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		3e-07
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-07
2oza_B	366	Structure Of P38alpha Complex Length = 366		3e-07
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		3e-07
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		3e-07
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-07
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		3e-07
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-07
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-07
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		3e-07
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		3e-07
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		3e-07
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		3e-07
4exu_A	371	Mapk13, Inactive Form Length = 371		3e-07
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		3e-07
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		3e-07
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		3e-07
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-07
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		4e-07
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		4e-07
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		4e-07
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		4e-07
3a7f_A	303	Human Mst3 Kinase Length = 303		4e-07
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		4e-07
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		4e-07
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		4e-07
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		4e-07
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		4e-07
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		4e-07
3hec_A	348	P38 In Complex With Imatinib Length = 348		5e-07
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		5e-07
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		5e-07
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		5e-07
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		5e-07
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		5e-07
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		5e-07
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		5e-07
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		5e-07
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		5e-07
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		5e-07
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		5e-07
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		5e-07
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		5e-07
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		5e-07
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		5e-07
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		5e-07
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		5e-07
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		5e-07
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		5e-07
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		5e-07
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		5e-07
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		5e-07
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-07
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		5e-07
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-07
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		5e-07
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		6e-07
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		6e-07
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		6e-07
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		6e-07
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		6e-07
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		6e-07
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		6e-07
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		6e-07
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		6e-07
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		6e-07
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		6e-07
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		6e-07
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		6e-07
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		6e-07
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		6e-07
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		6e-07
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		7e-07
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		7e-07
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		7e-07
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		7e-07
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		7e-07
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		7e-07
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		7e-07
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		7e-07
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-07
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		8e-07
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-07
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		8e-07
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		8e-07
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		8e-07
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		8e-07
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		8e-07
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		8e-07
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		8e-07
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-07
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		9e-07
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-07
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		9e-07
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		9e-07
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-07
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-06
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-06
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		1e-06
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		1e-06
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		1e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		1e-06
3g51_A	325	Structural Diversity Of The Active Conformation Of		1e-06
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-06
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		1e-06
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		1e-06
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		1e-06
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		2e-06
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-06
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-06
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-06
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		2e-06
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-06
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		2e-06
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		2e-06
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-06
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		2e-06
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-06
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-06
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-06
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-06
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		2e-06
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		2e-06
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-06
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		2e-06
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		2e-06
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-06
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		2e-06
4fl3_A	635	Structural And Biophysical Characterization Of The		3e-06
4fl2_A	636	Structural And Biophysical Characterization Of The		3e-06
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		3e-06
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-06
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		3e-06
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		3e-06
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-06
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-06
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		3e-06
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		3e-06
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		3e-06
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-06
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		3e-06
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		3e-06
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		3e-06
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		3e-06
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		3e-06
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		4e-06
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		4e-06
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		4e-06
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-06
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		4e-06
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		4e-06
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		4e-06
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		4e-06
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		4e-06
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-06
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		5e-06
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		5e-06
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		5e-06
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		5e-06
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		5e-06
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		5e-06
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		5e-06
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		5e-06
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		5e-06
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		5e-06
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		5e-06
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		5e-06
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		5e-06
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		5e-06
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		5e-06
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		5e-06
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		5e-06
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		5e-06
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		6e-06
3kk9_A	282	Camkii Substrate Complex B Length = 282		6e-06
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		6e-06
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		6e-06
3kk8_A	284	Camkii Substrate Complex A Length = 284		6e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-06
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		6e-06
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		7e-06
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-06
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		7e-06
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		8e-06
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		8e-06
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		8e-06
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		9e-06
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		9e-06
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		9e-06
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-05
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		1e-05
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		1e-05
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-05
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		1e-05
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		1e-05
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-05
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-05
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		1e-05
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-05
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-05
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		2e-05
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-05
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		2e-05
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-05
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		2e-05
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-05
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		3e-05
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-05
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		3e-05
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		4e-05
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		4e-05
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-05
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		4e-05
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		4e-05
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		4e-05
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		5e-05
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		5e-05
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		5e-05
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		5e-05
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		6e-05
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		6e-05
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		6e-05
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		6e-05
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		7e-05
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		8e-05
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		8e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		9e-05
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		9e-05
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-04
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-04
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		1e-04
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-04
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		2e-04
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		2e-04
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		2e-04
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-04
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		2e-04
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-04
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-04
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-04
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-04
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		2e-04
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-04
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		2e-04
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		3e-04
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-04
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-04
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		3e-04
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		3e-04
4ae6_A	343	Structure And Function Of The Human Sperm-specific		3e-04
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		4e-04
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-04
4ae9_A	343	Structure And Function Of The Human Sperm-specific		4e-04
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		4e-04
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		4e-04
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		4e-04
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-04
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-04
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-04
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		5e-04
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		5e-04
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		5e-04
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		5e-04
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		6e-04
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		6e-04
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		6e-04
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		6e-04
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		6e-04
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		6e-04
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		6e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		6e-04
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		7e-04
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		7e-04
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		7e-04
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		7e-04
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		7e-04
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		8e-04
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		8e-04
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		8e-04
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		8e-04
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		8e-04
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		8e-04
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-04
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-04
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  134 bits (337), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 105/168 (62%), Gaps = 2/168 (1%)
Query: 495 LPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE-EFKN 553
           L  FSL  +  A++NFS +  LG GGFG VYKGRL +G  VAVKRL  +  QG E +F+ 
Sbjct: 25  LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 554 EMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD-PTKKRLLGWQARIGI 612
           E+ +I+   HRNL+R+ G C+   E++L+  YM N S+   L + P  +  L W  R  I
Sbjct: 85  EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             G A+GL YLH +   +IIHRD+KA+N+LLD +    + DFGLA++ 
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  132 bits (331), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 495 LPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE-EFKN 553
           L  FSL  +  A++NF  +  LG GGFG VYKGRL +G  VAVKRL  +  QG E +F+ 
Sbjct: 17  LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 554 EMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD-PTKKRLLGWQARIGI 612
           E+ +I+   HRNL+R+ G C+   E++L+  YM N S+   L + P  +  L W  R  I
Sbjct: 77  EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             G A+GL YLH +   +IIHRD+KA+N+LLD +    + DFGLA++ 
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  115 bits (288), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 114/190 (60%), Gaps = 13/190 (6%)
Query: 477 NEFSEANGDRRDKSKDSWLPLFS-----LASVAAATENFSMECKLGEGGFGPVYKGRLLN 531
           +++S+A     D    S+L  F      L  +  AT NF  +  +G G FG VYKG L +
Sbjct: 3   SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62
Query: 532 GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL 591
           G +VA+KR + +S QG+EEF+ E+  ++  +H +LV ++G C E+ E ILI +YM N +L
Sbjct: 63  GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122
Query: 592 DVFLFD---PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN 648
              L+    PT    + W+ R+ I  G A+GL YLH  +   IIHRD+K+ N+LLD +  
Sbjct: 123 KRHLYGSDLPTMS--MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFV 177
Query: 649 PKISDFGLAR 658
           PKI+DFG+++
Sbjct: 178 PKITDFGISK 187

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  115 bits (288), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 114/190 (60%), Gaps = 13/190 (6%)
Query: 477 NEFSEANGDRRDKSKDSWLPLFS-----LASVAAATENFSMECKLGEGGFGPVYKGRLLN 531
           +++S+A     D    S+L  F      L  +  AT NF  +  +G G FG VYKG L +
Sbjct: 3   SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62
Query: 532 GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL 591
           G +VA+KR + +S QG+EEF+ E+  ++  +H +LV ++G C E+ E ILI +YM N +L
Sbjct: 63  GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122
Query: 592 DVFLFD---PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN 648
              L+    PT    + W+ R+ I  G A+GL YLH  +   IIHRD+K+ N+LLD +  
Sbjct: 123 KRHLYGSDLPTMS--MSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFV 177
Query: 649 PKISDFGLAR 658
           PKI+DFG+++
Sbjct: 178 PKITDFGISK 187

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 99/196 (50%), Gaps = 18/196 (9%)
Query: 492 DSWLPLFSLASVAAATENFSMEC------KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG 545
           D+    FS   +   T NF          K+GEGGFG VYKG  +N   VAVK+L++   
Sbjct: 9   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 67
Query: 546 QGLEE----FKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL--DVFLFDPT 599
              EE    F  E+ ++AK QH NLV +LG   +  +  L+  YMPN SL   +   D T
Sbjct: 68  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 600 KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
               L W  R  I +G A G+ +LH       IHRD+K++N+LLD     KISDFGLAR 
Sbjct: 128 PP--LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 660 FGGDELQGNTKRIVGT 675
                      RIVGT
Sbjct: 183 SEKFAQTVMXSRIVGT 198

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 99/196 (50%), Gaps = 18/196 (9%)
Query: 492 DSWLPLFSLASVAAATENFSMEC------KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG 545
           D+    FS   +   T NF          K+GEGGFG VYKG  +N   VAVK+L++   
Sbjct: 9   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 67
Query: 546 QGLEE----FKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL--DVFLFDPT 599
              EE    F  E+ ++AK QH NLV +LG   +  +  L+  YMPN SL   +   D T
Sbjct: 68  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 127
Query: 600 KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
               L W  R  I +G A G+ +LH       IHRD+K++N+LLD     KISDFGLAR 
Sbjct: 128 PP--LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 660 FGGDELQGNTKRIVGT 675
                      RIVGT
Sbjct: 183 SEKFAQTVMXXRIVGT 198

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 99/196 (50%), Gaps = 18/196 (9%)
Query: 492 DSWLPLFSLASVAAATENFSMEC------KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG 545
           D+    FS   +   T NF          K+GEGGFG VYKG  +N   VAVK+L++   
Sbjct: 3   DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 61
Query: 546 QGLEE----FKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL--DVFLFDPT 599
              EE    F  E+ ++AK QH NLV +LG   +  +  L+  YMPN SL   +   D T
Sbjct: 62  ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 600 KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
               L W  R  I +G A G+ +LH       IHRD+K++N+LLD     KISDFGLAR 
Sbjct: 122 PP--LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 660 FGGDELQGNTKRIVGT 675
                      RIVGT
Sbjct: 177 SEKFAQXVMXXRIVGT 192

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  103 bits (256), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEE----FKNEMLLIAKLQHRNLVRIL 570
           K GEGGFG VYKG  +N   VAVK+L++      EE    F  E+ + AK QH NLV +L
Sbjct: 29  KXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELL 87
Query: 571 GCCIEQGEKILILEYMPNKSL--DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
           G   +  +  L+  Y PN SL   +   D T    L W  R  I +G A G+ +LH    
Sbjct: 88  GFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP--LSWHXRCKIAQGAANGINFLHENHH 145
Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              IHRD+K++N+LLD     KISDFGLAR            RIVGT
Sbjct: 146 ---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGT 189

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 89.4 bits (220), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 12/160 (7%)
Query: 516 LGEGGFGPVYKGRLLNGEE-----VAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +   E     VA+K L+  +G +   EF +E L++A + H +LVR+
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + L+ + MP+  L  ++ +   K  +G Q  +     IA+G++YL      
Sbjct: 83  LGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER--- 136
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           R++HRDL A NVL+    + KI+DFGLAR+  GDE + N 
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 12/160 (7%)
Query: 516 LGEGGFGPVYKGRLLNGEE-----VAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +   E     VA+K L+  +G +   EF +E L++A + H +LVR+
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + L+ + MP+  L  ++ +   K  +G Q  +     IA+G++YL      
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLLLNWCVQIAKGMMYLEER--- 159
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           R++HRDL A NVL+    + KI+DFGLAR+  GDE + N 
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 84/155 (54%), Gaps = 6/155 (3%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG V+ G  LN ++VA+K +  +     E+F  E  ++ KL H  LV++ G C+
Sbjct: 14  EIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           EQ    L+ E+M +  L  +L   T++ L   +  +G+   + +G+ YL   S   +IHR
Sbjct: 73  EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIHR 127
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           DL A N L+  +   K+SDFG+ R    D+   +T
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 162

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG V+ G  LN ++VA+K +  +     E+F  E  ++ KL H  LV++ G C+
Sbjct: 14  EIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           EQ    L+ E+M +  L  +L   T++ L   +  +G+   + +G+ YL       +IHR
Sbjct: 73  EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           DL A N L+  +   K+SDFG+ R    D+   +T
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 162

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG V+ G  LN ++VA+K +  +     E+F  E  ++ KL H  LV++ G C+
Sbjct: 12  EIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           EQ    L+ E+M +  L  +L   T++ L   +  +G+   + +G+ YL       +IHR
Sbjct: 71  EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           DL A N L+  +   K+SDFG+ R    D+   +T
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 160

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG V+ G  LN ++VA+K +  +     E+F  E  ++ KL H  LV++ G C+
Sbjct: 17  EIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           EQ    L+ E+M +  L  +L   T++ L   +  +G+   + +G+ YL       +IHR
Sbjct: 76  EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           DL A N L+  +   K+SDFG+ R    D+   +T
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG V+ G  LN ++VA+K +  +     E+F  E  ++ KL H  LV++ G C+
Sbjct: 15  EIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           EQ    L+ E+M +  L  +L   T++ L   +  +G+   + +G+ YL       +IHR
Sbjct: 74  EQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           DL A N L+  +   K+SDFG+ R    D+   +T
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG V+ G  LN ++VA+K +   S    ++F  E  ++ KL H  LV++ G C+
Sbjct: 34  EIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           EQ    L+ E+M +  L  +L   T++ L   +  +G+   + +G+ YL       +IHR
Sbjct: 93  EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           DL A N L+  +   K+SDFG+ R    D+   +T
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 182

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNL 566
           + +++ K+G G FG V++    +G +VAVK L  Q    + + EF  E+ ++ +L+H N+
Sbjct: 38  DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           V  +G   +     ++ EY+   SL   L     +  L  + R+ +   +A+G+ YLH+ 
Sbjct: 97  VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
           +   I+HRDLK+ N+L+D+    K+ DFGL+R+
Sbjct: 157 NP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL 188

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNL 566
           + +++ K+G G FG V++    +G +VAVK L  Q    + + EF  E+ ++ +L+H N+
Sbjct: 38  DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           V  +G   +     ++ EY+   SL   L     +  L  + R+ +   +A+G+ YLH+ 
Sbjct: 97  VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
           +   I+HR+LK+ N+L+D+    K+ DFGL+R+
Sbjct: 157 NP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 25/156 (16%)
Query: 516 LGEGGFG--------PVYKGRLLNGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNL 566
           LGEG FG        P   G    GE VAVK L +  G Q    +K E+ ++  L H ++
Sbjct: 22  LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 567 VRILGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           ++  GCC +QGEK L  ++EY+P  SL  +L     +  +G    +   + I +G+ YLH
Sbjct: 79  IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 625 --HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             HY     IHR+L A NVLLD D   KI DFGLA+
Sbjct: 135 SQHY-----IHRNLAARNVLLDNDRLVKIGDFGLAK 165

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 25/156 (16%)
Query: 516 LGEGGFG--------PVYKGRLLNGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNL 566
           LGEG FG        P   G    GE VAVK L +  G Q    +K E+ ++  L H ++
Sbjct: 22  LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 567 VRILGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           ++  GCC +QGEK L  ++EY+P  SL  +L     +  +G    +   + I +G+ YLH
Sbjct: 79  IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 134
Query: 625 --HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             HY     IHR+L A NVLLD D   KI DFGLA+
Sbjct: 135 AQHY-----IHRNLAARNVLLDNDRLVKIGDFGLAK 165

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ EYM N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 163
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGLAR+   D     T R
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 81/156 (51%), Gaps = 25/156 (16%)
Query: 516 LGEGGFG--------PVYKGRLLNGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKLQHRNL 566
           LGEG FG        P   G    GE VAVK L    G  L   ++ E+ ++  L H ++
Sbjct: 17  LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 567 VRILGCCIEQGEKI--LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           V+  GCC +QGEK   L++EY+P  SL  +L     +  +G    +   + I +G+ YLH
Sbjct: 74  VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLH 129
Query: 625 --HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             HY     IHR L A NVLLD D   KI DFGLA+
Sbjct: 130 AQHY-----IHRALAARNVLLDNDRLVKIGDFGLAK 160

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 81/156 (51%), Gaps = 25/156 (16%)
Query: 516 LGEGGFG--------PVYKGRLLNGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKLQHRNL 566
           LGEG FG        P   G    GE VAVK L    G  L   ++ E+ ++  L H ++
Sbjct: 16  LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 567 VRILGCCIEQGEKI--LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           V+  GCC +QGEK   L++EY+P  SL  +L     +  +G    +   + I +G+ YLH
Sbjct: 73  VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICEGMAYLH 128
Query: 625 --HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             HY     IHR L A NVLLD D   KI DFGLA+
Sbjct: 129 AQHY-----IHRALAARNVLLDNDRLVKIGDFGLAK 159

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ EYM N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 163
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 164 ---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 17  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ EYM N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 77  PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 134
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 135 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ EYM N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 163
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +  +LG G FG V+ G   N  +VAVK L   +   ++ F  E  L+  LQH  LV
Sbjct: 13  ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLV 71
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           R+      +    +I EYM   SL  FL  D   K LL     I     IA+G+ Y+   
Sbjct: 72  RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE-- 127
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            R   IHRDL+A+NVL+   +  KI+DFGLAR+   +E
Sbjct: 128 -RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 164

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ EYM N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 163
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ EYM N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 163
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 44  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ EYM N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 161
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 162 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ EYM N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 163
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 34  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ EYM N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 94  PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 151
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 152 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 242
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     E+   I + EYM   SL  FL   T K L   Q  + +   IA G+ Y+    
Sbjct: 243 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL-VDMAAQIASGMAYVE--- 297
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +  KLG G FG V+ G   N  +VAVK L   +   ++ F  E  L+  LQH  LV
Sbjct: 12  ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLV 70
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           R+     ++    +I E+M   SL  FL  D   K LL     I     IA+G+ Y+   
Sbjct: 71  RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE-- 126
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            R   IHRDL+A+NVL+   +  KI+DFGLAR+   +E
Sbjct: 127 -RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 163

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 242
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     E+   I + EYM   SL  FL   T K L   Q  + +   IA G+ Y+    
Sbjct: 243 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL-VDMAAQIASGMAYVE--- 297
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 325
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     E+   I + EYM   SL  FL   T K L   Q  + +   IA G+ Y+    
Sbjct: 326 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL-VDMAAQIASGMAYVE--- 380
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 381 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ EYM N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 163
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL R+   D     T R
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR 208

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 242
Query: 568 RILGCCIEQGEKILIL-EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           ++     E  E I I+ EYM   SL  FL   T K L   Q  + +   IA G+ Y+   
Sbjct: 243 QLYAVVSE--EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQL-VDMAAQIASGMAYVE-- 297
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 298 -RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 19  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 78  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 135
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 136 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 169

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 18  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 76
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 77  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 134
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 135 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 168

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 19  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 78  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 135
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 136 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 169

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 72  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 129
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE-----EVAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +G G FG VYKG L          VA+K L +  + +   +F  E  ++ +  H N++R+
Sbjct: 52  IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
            G   +    ++I EYM N +LD FL +  K         +G++ GIA G+ YL   +  
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
             +HRDL A N+L++ ++  K+SDFGL+R+   D
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 72  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 129
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 14  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 72
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 73  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 130
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 131 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 164

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 21  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 79
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 80  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 137
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 138 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 171

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 15  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 73
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 74  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 131
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 132 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 165

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 23  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 81
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 82  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 139
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 140 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 173

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 72  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 129
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 22  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 80
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 81  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 138
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 139 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 172

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 8   ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 66
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 67  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN 124
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 125 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 158

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 8   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 66
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     E+   I + EYM   SL  FL   T K L   Q  + +   IA G+ Y+    
Sbjct: 67  QLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLPQL-VDMAAQIASGMAYVE--- 121
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 122 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 158

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE 549
           +KD+W             E+  +E KLG+G FG V+ G       VA+K L   +    E
Sbjct: 2   AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 51
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            F  E  ++ KL+H  LV++     E+   I + EYM   SL  FL   T K L   Q  
Sbjct: 52  AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGETGKYLRLPQL- 109
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + +   IA G+ Y+    R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 110 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 161

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 24/167 (14%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI--------IE 614
           H N+V++L     + +  L+ E++   S+D+       K+ +   A  GI        + 
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL---SMDL-------KKFMDASALTGIPLPLIKSYLF 111
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            + QGL + H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 155

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 24/167 (14%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI--------IE 614
           H N+V++L     + +  L+ E++   S+D+       K+ +   A  GI        + 
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL---SMDL-------KKFMDASALTGIPLPLIKSYLF 113
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            + QGL + H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 157

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 90/178 (50%), Gaps = 26/178 (14%)
Query: 515 KLGEGGFGPVYKGRLLN---GEE---VAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLV 567
           +LGE  FG VYKG L     GE+   VA+K L  ++ G   EEF++E +L A+LQH N+V
Sbjct: 33  ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLF-------------DPTKKRLLGWQARIGIIE 614
            +LG   +     +I  Y  +  L  FL              D T K  L     + ++ 
Sbjct: 93  CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-MFGGD--ELQGNT 669
            IA G+ YL   S   ++H+DL   NVL+   +N KISD GL R ++  D  +L GN+
Sbjct: 153 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 13/157 (8%)
Query: 516 LGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRI 569
           LGEG FG V   R        GE+VAVK L  +SG   + + K E+ ++  L H N+V+ 
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            G C E G     LI+E++P+ SL  +L  P  K  +  + ++     I +G+ YL   S
Sbjct: 89  KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLG--S 144
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R + +HRDL A NVL++ +   KI DFGL +    D+
Sbjct: 145 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 81/156 (51%), Gaps = 25/156 (16%)
Query: 516 LGEGGFG--------PVYKGRLLNGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNL 566
           LGEG FG        P   G    GE VAVK L + +G Q    +K E+ ++  L H ++
Sbjct: 39  LGEGHFGKVSLYCYDPTNDG---TGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 567 VRILGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           ++  GCC + G   L  ++EY+P  SL  +L     +  +G    +   + I +G+ YLH
Sbjct: 96  IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLH 151
Query: 625 --HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             HY     IHRDL A NVLLD D   KI DFGLA+
Sbjct: 152 AQHY-----IHRDLAARNVLLDNDRLVKIGDFGLAK 182

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ YL  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 149
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 90/178 (50%), Gaps = 26/178 (14%)
Query: 515 KLGEGGFGPVYKGRLLN---GEE---VAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLV 567
           +LGE  FG VYKG L     GE+   VA+K L  ++ G   EEF++E +L A+LQH N+V
Sbjct: 16  ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLF-------------DPTKKRLLGWQARIGIIE 614
            +LG   +     +I  Y  +  L  FL              D T K  L     + ++ 
Sbjct: 76  CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-MFGGD--ELQGNT 669
            IA G+ YL   S   ++H+DL   NVL+   +N KISD GL R ++  D  +L GN+
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 190

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ YL  
Sbjct: 97  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 148
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 13/157 (8%)
Query: 516 LGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRI 569
           LGEG FG V   R        GE+VAVK L  +SG   + + K E+ ++  L H N+V+ 
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            G C E G     LI+E++P+ SL  +L  P  K  +  + ++     I +G+ YL   S
Sbjct: 77  KGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLG--S 132
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R + +HRDL A NVL++ +   KI DFGL +    D+
Sbjct: 133 R-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 168

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 56  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ YL  
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 167
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 199

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 35  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ YL  
Sbjct: 95  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 146
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ YL  
Sbjct: 96  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 147
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ YL  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 149
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 33  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ YL  
Sbjct: 93  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 144
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 57  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ YL  
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 168
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 200

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ YL  
Sbjct: 97  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 148
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 30  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ YL  
Sbjct: 90  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKYL-- 141
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 173

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE 549
           +KD+W             E+  +E KLG+G FG V+ G       VA+K L   +    E
Sbjct: 9   AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            F  E  ++ KL+H  LV++     E+   I+I EYM   SL  FL     K L   Q  
Sbjct: 59  AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + +   IA G+ Y+    R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE 549
           +KD+W             E+  +E KLG+G FG V+ G       VA+K L   +    E
Sbjct: 9   AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            F  E  ++ KL+H  LV++     E+   I+I EYM   SL  FL     K L   Q  
Sbjct: 59  AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + +   IA G+ Y+    R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 27/166 (16%)
Query: 510 FSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRN 565
            ++E  +G GGFG VY+   + G+EVAVK           Q +E  + E  L A L+H N
Sbjct: 9   LTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKR-----LLGWQARIGIIEGIAQGL 620
           ++ + G C+++    L++E+     L+  L   + KR     L+ W  +I      A+G+
Sbjct: 68  IIALRGVCLKEPNLCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQI------ARGM 118
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNP--------KISDFGLAR 658
            YLH  +   IIHRDLK+SN+L+ + +          KI+DFGLAR
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 509 NFSMECKLGEGGFGPVYKGR---LLNGEE---VAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
           +  ++ +LGEG FG V+      LL  ++   VAVK L   S    ++F+ E  L+  LQ
Sbjct: 42  DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 101
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRL----------LGWQARI 610
           H+++VR  G C E    +++ EYM +  L+ FL    P  K L          LG    +
Sbjct: 102 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +   +A G++YL   +    +HRDL   N L+ + +  KI DFG++R
Sbjct: 162 AVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE 549
           +KD+W             E+  +E KLG+G FG V+ G       VA+K L   +    E
Sbjct: 6   AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 55
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            F  E  ++ KL+H  LV++     E+   I + EYM   SL  FL   T K L   Q  
Sbjct: 56  AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQL- 113
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + +   IA G+ Y+    R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 114 VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 509 NFSMECKLGEGGFGPVYKGR---LLNGEE---VAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
           +  ++ +LGEG FG V+      LL  ++   VAVK L   S    ++F+ E  L+  LQ
Sbjct: 19  DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 78
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRL----------LGWQARI 610
           H+++VR  G C E    +++ EYM +  L+ FL    P  K L          LG    +
Sbjct: 79  HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +   +A G++YL   +    +HRDL   N L+ + +  KI DFG++R
Sbjct: 139 AVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 15/175 (8%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE 549
           +KD+W             E+  +E KLG+G FG V+ G       VA+K L   +    E
Sbjct: 6   AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 55
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            F  E  ++ KL+H  LV++     E+   I + EYM   SL  FL   T K L   Q  
Sbjct: 56  AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGETGKYLRLPQL- 113
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + +   IA G+ Y+    R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 114 VDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 509 NFSMECKLGEGGFGPVYKGR---LLNGEE---VAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
           +  ++ +LGEG FG V+      LL  ++   VAVK L   S    ++F+ E  L+  LQ
Sbjct: 13  DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 72
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRL----------LGWQARI 610
           H+++VR  G C E    +++ EYM +  L+ FL    P  K L          LG    +
Sbjct: 73  HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +   +A G++YL   +    +HRDL   N L+ + +  KI DFG++R
Sbjct: 133 AVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 17  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ E M N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 77  PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 134
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 135 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 97  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ +L  
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 208
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 240

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 24/167 (14%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI--------IE 614
           H N+V++L     + +  L+ E++   S+D+       K  +   A  GI        + 
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL---SMDL-------KDFMDASALTGIPLPLIKSYLF 113
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            + QGL + H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ E M N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 163
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 164 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ +L  
Sbjct: 96  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 147
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQH 563
           N S++  +G G FG V  GRL   + +E++V   + + G   +   +F  E  ++ +  H
Sbjct: 46  NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +    +++ E M N SLD FL     +  +     +G++ GIA G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGIASGMKYL 163
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
              S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 164 ---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 9   ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 67
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 68  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN 125
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHR+L+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 126 ---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNE 159

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ +L  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 149
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 24/167 (14%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI--------IE 614
           H N+V++L     + +  L+ E++   S+D+       K  +   A  GI        + 
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFL---SMDL-------KDFMDASALTGIPLPLIKSYLF 112
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            + QGL + H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ +L  
Sbjct: 99  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 150
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ +L  
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 149
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 181

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 43  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ +L  
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 154
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 186

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRIL 570
           +G G FG VY G LL+ +      AVK L+  +  G + +F  E +++    H N++ +L
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           G C+  +G  +++L YM +  L  F+     +PT K L+G+  ++      A+G+ +L  
Sbjct: 99  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKGMKFL-- 150
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/167 (32%), Positives = 87/167 (52%), Gaps = 24/167 (14%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI--------IE 614
           H N+V++L     + +  L+ E++          D   K+ +   A  GI        + 
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEHV----------DQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            + QGL + H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 62  NIVKLLDVIHTENKLYLVFEHV-HQDLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 16  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 76  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 129
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 130 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 167

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 130
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 131 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 7   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 65
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     E+   I + EYM   SL  FL     K L   Q  + +   IA G+ Y+    
Sbjct: 66  QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVE--- 120
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 121 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 157

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 48  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 161
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 162 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE 549
           +KD+W             E+  +E KLG+G FG V+ G       VA+K L   +    E
Sbjct: 9   AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            F  E  ++ KL+H  LV++     E+   I + EYM   SL  FL     K L   Q  
Sbjct: 59  AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + +   IA G+ Y+    R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 9   ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 67
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     E+   I + EYM   SL  FL     K L   Q  + +   IA G+ Y+    
Sbjct: 68  QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVE--- 122
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 123 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 159

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 130
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 131 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 19/167 (11%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLN--GEE----VAVKRLSSQSGQGLEEFKNEMLLIAKL 561
            N  ++ +LGEG FG V+     N   E+    VAVK L   S    ++F  E  L+  L
Sbjct: 13  HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR----------IG 611
           QH ++V+  G C+E    I++ EYM +  L+ FL       +L  +            + 
Sbjct: 73  QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           I + IA G++YL   +    +HRDL   N L+  ++  KI DFG++R
Sbjct: 133 IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 15  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 75  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 128
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 129 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 166

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 161

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE 549
           +KD+W             E+  +E KLG+G FG V+ G       VA+K L   +    E
Sbjct: 9   AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            F  E  ++ KL+H  LV++     E+   I + EYM   SL  FL     K L   Q  
Sbjct: 59  AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VCEYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + +   IA G+ Y+    R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 156

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 22  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 82  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 135
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 136 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 173

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 3   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 63  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 121 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 156

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 155

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 80  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 133
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 134 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 80  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQ------ICKGMEYL 133
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 134 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 24  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 84  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 137
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 138 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 175

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 10  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 70  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 127
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 161

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 17  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 77  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 130
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 131 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 2   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 62  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 23  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 83  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 136
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 137 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 174

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 7   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 67  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 5   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 65  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 123 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 158

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 21  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 81  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 134
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 135 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 172

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 4   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 64  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 157

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 510 FSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQHRN 565
           FS   ++G G FG VY  R + N E VA+K++S    QS +  ++   E+  + KL+H N
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
            ++  GC + +    L++EY    + D+       K+ L       +  G  QGL YLH 
Sbjct: 77  TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           ++   +IHRD+KA N+LL      K+ DFG A +  
Sbjct: 134 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 4   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 64  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 155

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 33  DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 91
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    ++ EYMP  +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 92  QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-VVLLYMATQISSAMEYL---E 147
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD 183

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQ 562
           + ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L 
Sbjct: 1   SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL +
Sbjct: 61  HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFM-DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            H +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFG 154

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 10/156 (6%)
Query: 510 FSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQHRN 565
           FS   ++G G FG VY  R + N E VA+K++S    QS +  ++   E+  + KL+H N
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
            ++  GC + +    L++EY    + D+       K+ L       +  G  QGL YLH 
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHS 172
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           ++   +IHRD+KA N+LL      K+ DFG A +  
Sbjct: 173 HN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 205

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L        E F  E  ++ KL+H  LV
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLV 243
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     E+   I + EYM   SL  FL     K L   Q  + +   IA G+ Y+    
Sbjct: 244 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL-VDMAAQIASGMAYVE--- 298
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   +HRDL+A+N+L+  ++  K++DFGL R+   +E
Sbjct: 299 RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE 335

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 35  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 95  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 148
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 149 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 186

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 510 FSMECKLGEGGFGPVYKGRL-LNGEE---VAVKRLS-SQSGQGLEEFKNEMLLIAKLQHR 564
            ++E  +G G FG V  GRL L G+    VA+K L    + +   +F  E  ++ +  H 
Sbjct: 24  ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N++ + G   +    +++ EYM N SLD FL     +  +     +G++ GI+ G+ YL 
Sbjct: 84  NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--IQLVGMLRGISAGMKYL- 140
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
             S    +HRDL A N+L++ ++  K+SDFGL+R+   D     T R
Sbjct: 141 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 185

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 35  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 95  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 148
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 149 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 186

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE 549
           +KD+W             E+  +E KLG+G FG V+ G       VA+K L   +    E
Sbjct: 9   AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            F  E  ++ KL+H  LV++     E+   I ++EYM    L  FL     K L   Q  
Sbjct: 59  AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VMEYMSKGCLLDFLKGEMGKYLRLPQL- 116
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + +   IA G+ Y+    R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 510 FSMECKLGEGGFGPVYKGRL-LNGEE---VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHR 564
             +E  +G G FG V  GRL + G+    VA+K L +  + +   +F +E  ++ +  H 
Sbjct: 31  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 90
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N++ + G   +    ++I EYM N SLD FL      R    Q  +G++ GI  G+ YL 
Sbjct: 91  NIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQL-VGMLRGIGSGMKYLS 148
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
             S    +HRDL A N+L++ ++  K+SDFG++R+   D     T R
Sbjct: 149 DMS---AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 192

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE 549
           +KD+W             E+  +E KLG+G FG V+ G       VA+K L   +    E
Sbjct: 9   AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            F  E  ++ K++H  LV++     E+   I + EYM   SL  FL     K L   Q  
Sbjct: 59  AFLQEAQVMKKIRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + +   IA G+ Y+    R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE 549
           +KD+W             E+  +E KLG+G FG V+ G       VA+K L   +    E
Sbjct: 9   AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            F  E  ++ KL+H  LV++     E+   I + EYM   SL  FL     K L   Q  
Sbjct: 59  AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLPQL- 116
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + +   IA G+ Y+    R   +HRDL A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE 168

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 510 FSMECKLGEGGFGPVYKGRL-LNGEE---VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHR 564
             +E  +G G FG V  GRL + G+    VA+K L +  + +   +F +E  ++ +  H 
Sbjct: 16  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N++ + G   +    ++I EYM N SLD FL      R    Q  +G++ GI  G+ YL 
Sbjct: 76  NIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQL-VGMLRGIGSGMKYLS 133
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
             S    +HRDL A N+L++ ++  K+SDFG++R+   D     T R
Sbjct: 134 DMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 10/157 (6%)
Query: 512 MECKLGEGGFGPVYKGRL-LNGEE---VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNL 566
           +E  +G G  G V  GRL + G+    VA+K L +  + +   +F +E  ++ +  H N+
Sbjct: 53  IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           +R+ G        +++ EYM N SLD FL   T          +G++ G+  G+ YL   
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL--- 167
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           S    +HRDL A NVL+D ++  K+SDFGL+R+   D
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 18/158 (11%)
Query: 512 MECKLGEGGFGPVYKGRL-LNGEE---VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNL 566
           +E  +G G FG V +GRL   G++   VA+K L    + +   EF +E  ++ + +H N+
Sbjct: 20  IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQ----ARIGIIEGIAQGLLY 622
           +R+ G        +++ E+M N +LD FL      RL   Q      +G++ GIA G+ Y
Sbjct: 80  IRLEGVVTNSMPVMILTEFMENGALDSFL------RLNDGQFTVIQLVGMLRGIASGMRY 133
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           L   S    +HRDL A N+L++ ++  K+SDFGL+R  
Sbjct: 134 LAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFL 168

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 10/157 (6%)
Query: 512 MECKLGEGGFGPVYKGRL-LNGEE---VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNL 566
           +E  +G G  G V  GRL + G+    VA+K L +  + +   +F +E  ++ +  H N+
Sbjct: 53  IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           +R+ G        +++ EYM N SLD FL   T          +G++ G+  G+ YL   
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL--- 167
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           S    +HRDL A NVL+D ++  K+SDFGL+R+   D
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 18/158 (11%)
Query: 512 MECKLGEGGFGPVYKGRL-LNGEE---VAVKRLSS-QSGQGLEEFKNEMLLIAKLQHRNL 566
           +E  +G G FG V +GRL   G++   VA+K L    + +   EF +E  ++ + +H N+
Sbjct: 18  IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQ----ARIGIIEGIAQGLLY 622
           +R+ G        +++ E+M N +LD FL      RL   Q      +G++ GIA G+ Y
Sbjct: 78  IRLEGVVTNSMPVMILTEFMENGALDSFL------RLNDGQFTVIQLVGMLRGIASGMRY 131
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           L   S    +HRDL A N+L++ ++  K+SDFGL+R  
Sbjct: 132 LAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFL 166

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 510 FSMECKLGEGGFGPVYKGRL-LNGEE---VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHR 564
             +E  +G G FG V  GRL + G+    VA+K L +  + +   +F +E  ++ +  H 
Sbjct: 10  IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N++ + G   +    ++I EYM N SLD FL      R    Q  +G++ GI  G+ YL 
Sbjct: 70  NIIHLEGVVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQL-VGMLRGIGSGMKYLS 127
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
             S    +HRDL A N+L++ ++  K+SDFG++R+   D     T R
Sbjct: 128 DMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G  G V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R L   + Q    +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 72  R-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIEERN 129
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+    E
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAE 163

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+E++P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 80  KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 133
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 134 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 15/175 (8%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE 549
           +KD+W             E+  +E KLG+G FG V+ G       VA+K L   +    E
Sbjct: 9   AKDAW---------EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPE 58
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
            F  E  ++ KL+H  LV++     E+   I + EYM    L  FL     K L   Q  
Sbjct: 59  AFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI-VTEYMSKGCLLDFLKGEMGKYLRLPQL- 116
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + +   IA G+ Y+    R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 117 VDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 486 RRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG 545
           RRD S D  +P              ++  ++G G FG VYKG+      V +  +++ + 
Sbjct: 16  RRDSSDDWEIP----------DGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTP 65
Query: 546 QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-FDPTKKRLL 604
           Q L+ FKNE+ ++ K +H N++  +G   +  +  ++ ++    SL   L    TK  ++
Sbjct: 66  QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 124
Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
                I I    AQG+ YLH  S   IIHRDLK++N+ L  D+  KI DFGLA
Sbjct: 125 KL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 171

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQH N+V+ 
Sbjct: 18  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 570 LGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G C   G +   LI+EY+P  SL  +L    ++    +LL + ++      I +G+ YL
Sbjct: 78  KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYL 131
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 R IHR+L   N+L++ +   KI DFGL ++   D+
Sbjct: 132 ---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDK 169

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 486 RRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG 545
           RRD S D  +P              ++  ++G G FG VYKG+      V +  +++ + 
Sbjct: 24  RRDSSDDWEIP----------DGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTP 73
Query: 546 QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-FDPTKKRLL 604
           Q L+ FKNE+ ++ K +H N++  +G   +  +  ++ ++    SL   L    TK  ++
Sbjct: 74  QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 132
Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
                I I    AQG+ YLH  S   IIHRDLK++N+ L  D+  KI DFGLA
Sbjct: 133 ---KLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 179

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 486 RRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG 545
           RRD S D  +P              ++  ++G G FG VYKG+      V +  +++ + 
Sbjct: 24  RRDSSDDWEIP----------DGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTP 73
Query: 546 QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-FDPTKKRLL 604
           Q L+ FKNE+ ++ K +H N++  +G   +  +  ++ ++    SL   L    TK  ++
Sbjct: 74  QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 132
Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
                I I    AQG+ YLH  S   IIHRDLK++N+ L  D+  KI DFGLA
Sbjct: 133 KL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 179

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 18/173 (10%)
Query: 486 RRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG 545
           RRD S D  +P              ++  ++G G FG VYKG+      V +  +++ + 
Sbjct: 23  RRDSSDDWEIP----------DGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTP 72
Query: 546 QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-FDPTKKRLL 604
           Q L+ FKNE+ ++ K +H N++  +G   +  +  ++ ++    SL   L    TK  ++
Sbjct: 73  QQLQAFKNEVGVLRKTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI 131
Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
                I I    AQG+ YLH  S   IIHRDLK++N+ L  D+  KI DFGLA
Sbjct: 132 KL---IDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLA 178

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+   RL +++         E+ L+ +L H 
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 63  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 154

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 8/157 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+   RL +++         E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++ ++ L  F+ D +    +        +  + QGL + H
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +   R++HRDLK  N+L++ +   K++DFGLAR FG
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 104/201 (51%), Gaps = 22/201 (10%)
Query: 470 FDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRL 529
           +DI T  N + + +G+  +++         L  +   TE F     LG G FG VYKG  
Sbjct: 12  YDIPTTENLYFQGSGEAPNQA---------LLRILKETE-FKKIKVLGSGAFGTVYKGLW 61
Query: 530 L-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL 583
           +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+LG C+    + LI 
Sbjct: 62  IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIT 120
Query: 584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL 643
           + MP   L  ++ +   K  +G Q  +     IA+G+ YL      R++HRDL A NVL+
Sbjct: 121 QLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLV 175
Query: 644 DRDMNPKISDFGLARMFGGDE 664
               + KI+DFGLA++ G +E
Sbjct: 176 KTPQHVKITDFGLAKLLGAEE 196

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I+E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 78  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I+E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 73  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 128
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG VYKG+      V +  +++ + Q L+ FKNE+ ++ K +H N++  +G   
Sbjct: 20  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 575 EQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
           +  +  ++ ++    SL   L    TK  ++     I I    AQG+ YLH  S   IIH
Sbjct: 80  KP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIH 132
Query: 634 RDLKASNVLLDRDMNPKISDFGLA 657
           RDLK++N+ L  D+  KI DFGLA
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLA 156

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG VYKG+      V +  +++ + Q L+ FKNE+ ++ K +H N++  +G   
Sbjct: 17  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 76
Query: 575 EQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
           +  +  ++ ++    SL   L    TK  ++     I I    AQG+ YLH  S   IIH
Sbjct: 77  KP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIH 129
Query: 634 RDLKASNVLLDRDMNPKISDFGLA 657
           RDLK++N+ L  D+  KI DFGLA
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLA 153

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I+E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 73  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 128
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 12  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I+E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 71  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 126
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG VYKG+      V +  +++ + Q L+ FKNE+ ++ K +H N++  +G   
Sbjct: 15  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 575 EQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
           +  +  ++ ++    SL   L    TK  ++     I I    AQG+ YLH  S   IIH
Sbjct: 75  KP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIH 127
Query: 634 RDLKASNVLLDRDMNPKISDFGLA 657
           RDLK++N+ L  D+  KI DFGLA
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG VYKG+      V +  +++ + Q L+ FKNE+ ++ K +H N++  +G   
Sbjct: 20  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 79
Query: 575 EQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
           +  +  ++ ++    SL   L    TK  ++     I I    AQG+ YLH  S   IIH
Sbjct: 80  KP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIH 132
Query: 634 RDLKASNVLLDRDMNPKISDFGLA 657
           RDLK++N+ L  D+  KI DFGLA
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLA 156

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 8/144 (5%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG VYKG+      V +  +++ + Q L+ FKNE+ ++ K +H N++  +G   
Sbjct: 15  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS- 73
Query: 575 EQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
            + +  ++ ++    SL   L    TK  ++     I I    AQG+ YLH  S   IIH
Sbjct: 74  TKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIH 127
Query: 634 RDLKASNVLLDRDMNPKISDFGLA 657
           RDLK++N+ L  D+  KI DFGLA
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 15  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I+E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 74  QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 129
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 512 MECKLGEGGFGPVYKGRL-LNGEE---VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNL 566
           +E  +G G FG V  G L L G+    VA+K L S  + +   +F +E  ++ +  H N+
Sbjct: 37  IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           + + G   +    ++I E+M N SLD FL     +  +     +G++ GIA G+ YL   
Sbjct: 97  IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL--- 151
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +    +HRDL A N+L++ ++  K+SDFGL+R    D
Sbjct: 152 ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G FG VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 12  DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 71  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 126
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 8/144 (5%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG VYKG+      V +  +++ + Q L+ FKNE+ ++ K +H N++  +G   
Sbjct: 15  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 74
Query: 575 EQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
              +  ++ ++    SL   L    TK  ++     I I    AQG+ YLH  S   IIH
Sbjct: 75  AP-QLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLHAKS---IIH 127
Query: 634 RDLKASNVLLDRDMNPKISDFGLA 657
           RDLK++N+ L  D+  KI DFGLA
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLA 151

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 133
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 27  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI++ MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 87  LGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 140
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 175

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 24  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI++ MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 84  LGICLTSTVQ-LIMQLMPFGXLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 137
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 24  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI++ MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 84  LGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 137
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 18/163 (11%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LGEG FG V +G L   +    +VAVK  +L + S + +EEF +E   +    H N++R+
Sbjct: 42  LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 570 LGCCIEQGEK-----ILILEYMPNKSLDVFLFDP---TKKRLLGWQARIGIIEGIAQGLL 621
           LG CIE   +     ++IL +M    L  +L      T  + +  Q  +  +  IA G+ 
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA-RMFGGD 663
           YL   S    +HRDL A N +L  DM   ++DFGL+ +++ GD
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 128
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI++ MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 85  LGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 128
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI++ MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 86  LGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 6/143 (4%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG VYKG+      V +  +++ + Q L+ FKNE+ ++ K +H N++  +G   
Sbjct: 19  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +  +  ++ ++    SL   L     K     +  I I    A+G+ YLH  S   IIHR
Sbjct: 79  KP-QLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---IIHR 132
Query: 635 DLKASNVLLDRDMNPKISDFGLA 657
           DLK++N+ L  D   KI DFGLA
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLA 155

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 76
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 77  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 132
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 168

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI++ MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 83  LGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 128
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 85/162 (52%), Gaps = 6/162 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 12  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 71  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 126
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           +   IHRDL A N L+  +   K++DFGL+R+  GD    + 
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHA 168

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 19  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 78  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 6/143 (4%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG VYKG+      V +  +++ + Q L+ FKNE+ ++ K +H N++  +G   
Sbjct: 31  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +  +  ++ ++    SL   L     K     +  I I    A+G+ YLH  S   IIHR
Sbjct: 91  KP-QLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 635 DLKASNVLLDRDMNPKISDFGLA 657
           DLK++N+ L  D   KI DFGLA
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA 167

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 14  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 72
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 73  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 128
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 75  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 130
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 15  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 73
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 74  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLE--- 129
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 27  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 85
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 86  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 141
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 177

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 75  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 130
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 16  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 74
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 75  QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 130
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHRDL A N L+  +   K++DFGL+R+  GD
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 83/144 (57%), Gaps = 6/144 (4%)
Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           +LG+G FG VYK +    G   A K + ++S + LE++  E+ ++A   H  +V++LG  
Sbjct: 26  ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
              G+  +++E+ P  ++D  + +   + L   Q ++ +   + + L +LH     RIIH
Sbjct: 86  YHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQV-VCRQMLEALNFLHSK---RIIH 140
Query: 634 RDLKASNVLLDRDMNPKISDFGLA 657
           RDLKA NVL+  + + +++DFG++
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVS 164

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 8/156 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLS-SQSGQGLEEFK-NEMLLIAKLQHRN 565
           E +    K+GEG +G VYK +   G  VA+KR+      +G+      E+ L+ +L H N
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V ++     +    L+ E+M  K L   L D  K  L   Q +I + + + +G+ + H 
Sbjct: 81  IVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQ 137
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           +   RI+HRDLK  N+L++ D   K++DFGLAR FG
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           ++G G FG VYKG+      V +  +++ + Q L+ FKNE+ ++ K +H N++  +G   
Sbjct: 31  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
              +  ++ ++    SL   L     K     +  I I    A+G+ YLH  S   IIHR
Sbjct: 91  AP-QLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 635 DLKASNVLLDRDMNPKISDFGLA 657
           DLK++N+ L  D   KI DFGLA
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLA 167

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 86/151 (56%), Gaps = 6/151 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
           E + +  +LG+G FG VYK +    G   A K + ++S + LE++  E+ ++A   H  +
Sbjct: 11  EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 70
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           V++LG     G+  +++E+ P  ++D  + +   + L   Q ++ +   + + L +LH  
Sbjct: 71  VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQV-VCRQMLEALNFLHSK 128
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
              RIIHRDLKA NVL+  + + +++DFG++
Sbjct: 129 ---RIIHRDLKAGNVLMTLEGDIRLADFGVS 156

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 8/156 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLS-SQSGQGLEEFK-NEMLLIAKLQHRN 565
           E +    K+GEG +G VYK +   G  VA+KR+      +G+      E+ L+ +L H N
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V ++     +    L+ E+M  K L   L D  K  L   Q +I + + + +G+ + H 
Sbjct: 81  IVSLIDVIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQ 137
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           +   RI+HRDLK  N+L++ D   K++DFGLAR FG
Sbjct: 138 H---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 279
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 335
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHR+L A N L+  +   K++DFGL+R+  GD
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 17  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 77  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 130
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 21/161 (13%)
Query: 516 LGEGGFGPVYKGRLLNG---EEVAVKRLSS-QSGQGLEEFKNEMLLIAKL-QHRNLVRIL 570
           +GEG FG V K R+       + A+KR+    S     +F  E+ ++ KL  H N++ +L
Sbjct: 23  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 571 GCCIEQGEKILILEYMPNKSLDVFL-------FDP------TKKRLLGWQARIGIIEGIA 617
           G C  +G   L +EY P+ +L  FL        DP      +    L  Q  +     +A
Sbjct: 83  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +G+ YL   S+ + IHRDL A N+L+  +   KI+DFGL+R
Sbjct: 143 RGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 83  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 83  LGICLTSTVQ-LITQLMPFGXLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 29  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 89  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 142
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 177

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 21/161 (13%)
Query: 516 LGEGGFGPVYKGRLLNG---EEVAVKRLSS-QSGQGLEEFKNEMLLIAKL-QHRNLVRIL 570
           +GEG FG V K R+       + A+KR+    S     +F  E+ ++ KL  H N++ +L
Sbjct: 33  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 571 GCCIEQGEKILILEYMPNKSLDVFL-------FDP------TKKRLLGWQARIGIIEGIA 617
           G C  +G   L +EY P+ +L  FL        DP      +    L  Q  +     +A
Sbjct: 93  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +G+ YL   S+ + IHRDL A N+L+  +   KI+DFGL+R
Sbjct: 153 RGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 33  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 93  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 146
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 181

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 10/164 (6%)
Query: 499 SLAS-VAAATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQS---GQGLEEFKN 553
           SLA+ +    E+F +   LG+G F  VY+   ++ G EVA+K +  ++      ++  +N
Sbjct: 1   SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 554 EMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII 613
           E+ +  +L+H +++ +     +     L+LE   N  ++ +L +  K      +AR   +
Sbjct: 61  EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP-FSENEAR-HFM 118
Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             I  G+LYLH +    I+HRDL  SN+LL R+MN KI+DFGLA
Sbjct: 119 HQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLA 159

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 85  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 86  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 20  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 80  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAEGMNYLEDR--- 133
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 168

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 86  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 86  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 139
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 30  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 90  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 18/166 (10%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEE-VAVKRLSSQSGQG-------LEEFKNEMLL 557
           A      E ++G+GGFG V+KGRL+  +  VA+K L     +G        +EF+ E+ +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIA 617
           ++ L H N+V++ G         +++E++P   L   L D  K   + W  ++ ++  IA
Sbjct: 77  MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDR-DMN----PKISDFGLAR 658
            G+ Y+ + +   I+HRDL++ N+ L   D N     K++DFGL++
Sbjct: 133 LGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +  +LG G FG V+ G      +VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 9   ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLV 67
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     E+   I + EYM   SL  FL D  + R L     + +   +A G+ Y+    
Sbjct: 68  QLYAVVSEEPIYI-VTEYMNKGSLLDFLKD-GEGRALKLPNLVDMAAQVAAGMAYIE--- 122
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   IHRDL+++N+L+   +  KI+DFGLAR+   +E
Sbjct: 123 RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNE 159

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 510 FSMECKLGEGGFGPVYKGRL-LNGEE---VAVKRLS-SQSGQGLEEFKNEMLLIAKLQHR 564
             +E  +G G FG V  GRL L G+    VA+K L    + +   +F  E  ++ +  H 
Sbjct: 45  IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHP 104
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V + G        ++++E+M N +LD FL     +  +     +G++ GIA G+ YL 
Sbjct: 105 NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--IQLVGMLRGIAAGMRYL- 161
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
             +    +HRDL A N+L++ ++  K+SDFGL+R+   D
Sbjct: 162 --ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 83  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 84/171 (49%), Gaps = 31/171 (18%)
Query: 516 LGEGGFGPVYKGR---LLNGEE---VAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRNLVR 568
           +GEG FG V++ R   LL  E    VAVK L  ++   ++ +F+ E  L+A+  + N+V+
Sbjct: 55  IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFL--FDP------------TKKRL-------LGWQ 607
           +LG C       L+ EYM    L+ FL    P            T+ R+       L   
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            ++ I   +A G+ YL   S  + +HRDL   N L+  +M  KI+DFGL+R
Sbjct: 175 EQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NLV
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 318
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++LG C  +    +I E+M   +L  +L +  ++ +      + +   I+  + YL    
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 374
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +   IHR+L A N L+  +   K++DFGL+R+  GD
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 410

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 10/157 (6%)
Query: 512 MECKLGEGGFGPVYKGRL-LNGEE---VAVKRLSS-QSGQGLEEFKNEMLLIAKLQHRNL 566
           +E  +G G FG V  G L L G+    VA+K L S  + +   +F +E  ++ +  H N+
Sbjct: 11  IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           + + G   +    ++I E+M N SLD FL     +  +     +G++ GIA G+ YL   
Sbjct: 71  IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL--- 125
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +    +HR L A N+L++ ++  K+SDFGL+R    D
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDD 162

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 22/169 (13%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLNGEE------VAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
           +  ++ +LGEG FG V+     N         VAVK L   +    ++F+ E  L+  LQ
Sbjct: 16  DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ 75
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLGWQAR----------- 609
           H ++V+  G C +    I++ EYM +  L+ FL    P    L+  Q R           
Sbjct: 76  HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           + I   IA G++YL   +    +HRDL   N L+  ++  KI DFG++R
Sbjct: 136 LHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 502 SVAAATE------NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFK 552
           S+ +AT+      N+ ++  +G+G F  V   R +L G EVAVK +  +  +   L++  
Sbjct: 3   SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF 62
Query: 553 NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI 612
            E+ ++  L H N+V++      +    L++EY      +VF +     R+   +AR   
Sbjct: 63  REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKF 120
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
            + I   + Y H      I+HRDLKA N+LLD DMN KI+DFG +  F
Sbjct: 121 RQ-IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEF 164

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 27  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI++ MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 87  LGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 140
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFG A++ G +E
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 175

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           L  G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 30  LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI++ MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 90  LGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI++ MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 85  LGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFG A++ G +E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI++ MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 85  LGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFG A++ G +E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 95/194 (48%), Gaps = 26/194 (13%)
Query: 501 ASVAAATENF---SMECKLGE----GGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKN 553
           + V   TEN    SM  +L E    G FG V+K +LLN E VAVK    Q  Q  +  + 
Sbjct: 10  SGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQN-EY 67
Query: 554 EMLLIAKLQHRNLVRILGCCIEQGEKI-----LILEYMPNKSLDVFLFDPTKKRLLGWQA 608
           E+  +  ++H N+++ +G   ++G  +     LI  +    SL  FL    K  ++ W  
Sbjct: 68  EVYSLPGMKHENILQFIGA-EKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNE 122
Query: 609 RIGIIEGIAQGLLYLHH-------YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
              I E +A+GL YLH          +  I HRD+K+ NVLL  ++   I+DFGLA  F 
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182
Query: 662 GDELQGNTKRIVGT 675
             +  G+T   VGT
Sbjct: 183 AGKSAGDTHGQVGT 196

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRN 565
           N+ +   +G+G F  V   R +L G+EVAVK +  +  +   L++   E+ ++  L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++      +    L++EY      +VF +     R+   +AR    + I   + Y H 
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQ-IVSAVQYCHQ 131
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             +F I+HRDLKA N+LLD DMN KI+DFG +  F
Sbjct: 132 --KF-IVHRDLKAENLLLDADMNIKIADFGFSNEF 163

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRN 565
           N+ +   +G+G F  V   R +L G+EVAVK +  +  +   L++   E+ ++  L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++      +    L++EY      +VF +     R+   +AR    + I   + Y H 
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQ-IVSAVQYCHQ 131
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             +F I+HRDLKA N+LLD DMN KI+DFG +  F
Sbjct: 132 --KF-IVHRDLKAENLLLDADMNIKIADFGFSNEF 163

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           LG+G +G VY GR L N   +A+K +  +  +  +    E+ L   L+H+N+V+ LG   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 575 EQGEKILILEYMPNKSLDVFL---FDPTK--KRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           E G   + +E +P  SL   L   + P K  ++ +G+  +      I +GL YLH     
Sbjct: 90  ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHDN--- 141
Query: 630 RIIHRDLKASNVLLDRDMNP-KISDFGLARMFGG 662
           +I+HRD+K  NVL++      KISDFG ++   G
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRN 565
           N+ +   +G+G F  V   R +L G+EVAVK +  +  +   L++   E+ ++  L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++      +    L++EY      +VF +     R+   +AR    + I   + Y H 
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQ-IVSAVQYCHQ 131
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             +F I+HRDLKA N+LLD DMN KI+DFG +  F
Sbjct: 132 --KF-IVHRDLKAENLLLDADMNIKIADFGFSNEF 163

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRN 565
           N+ +   +G+G F  V   R +L G EVA+K +  +  +   L++   E+ ++  L H N
Sbjct: 13  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++      +    LI+EY      +VF +     R+   +AR      I   + Y H 
Sbjct: 73  IVKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHGRMKEKEAR-SKFRQIVSAVQYCHQ 129
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
               RI+HRDLKA N+LLD DMN KI+DFG +  F
Sbjct: 130 K---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 161

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 21/161 (13%)
Query: 516 LGEGGFGPVYKGRLLNG---EEVAVKRLSS-QSGQGLEEFKNEMLLIAKL-QHRNLVRIL 570
           +GEG FG V K R+       + A+KR+    S     +F  E+ ++ KL  H N++ +L
Sbjct: 30  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 571 GCCIEQGEKILILEYMPNKSLDVFL-------FDP------TKKRLLGWQARIGIIEGIA 617
           G C  +G   L +EY P+ +L  FL        DP      +    L  Q  +     +A
Sbjct: 90  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +G+ YL   S+ + IHR+L A N+L+  +   KI+DFGL+R
Sbjct: 150 RGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 9/155 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRN 565
           N+ +   +G+G F  V   R +L G EVA+K +  +  +   L++   E+ ++  L H N
Sbjct: 16  NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++      +    LI+EY      +VF +     R+   +AR      I   + Y H 
Sbjct: 76  IVKLFEVIETEKTLYLIMEYASGG--EVFDYLVAHGRMKEKEAR-SKFRQIVSAVQYCHQ 132
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
               RI+HRDLKA N+LLD DMN KI+DFG +  F
Sbjct: 133 K---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 164

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E  ++  +LG G FG V  G+     +VAVK +   S    +EF  E   + KL H  LV
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLV 66
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           +  G C ++    ++ EY+ N  L  +L    K   L     + +   + +G+ +L  + 
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESH- 123
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             + IHRDL A N L+DRD+  K+SDFG+ R    D+
Sbjct: 124 --QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 18/166 (10%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEE-VAVKRLSSQSGQG-------LEEFKNEMLL 557
           A      E ++G+GGFG V+KGRL+  +  VA+K L     +G        +EF+ E+ +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIA 617
           ++ L H N+V++ G         +++E++P   L   L D  K   + W  ++ ++  IA
Sbjct: 77  MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDR-DMN----PKISDFGLAR 658
            G+ Y+ + +   I+HRDL++ N+ L   D N     K++DFG ++
Sbjct: 133 LGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           LG+G +G VY GR L N   +A+K +  +  +  +    E+ L   L+H+N+V+ LG   
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 575 EQGEKILILEYMPNKSLDVFL---FDPTK--KRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           E G   + +E +P  SL   L   + P K  ++ +G+  +      I +GL YLH     
Sbjct: 76  ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHDN--- 127
Query: 630 RIIHRDLKASNVLLDRDMNP-KISDFGLARMFGG 662
           +I+HRD+K  NVL++      KISDFG ++   G
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 161

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           L  G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 23  LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 83  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++       +  +VAVK L     +  E +F  E L+I+K
Sbjct: 31  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
           L H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 91  LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 69.7 bits (169), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG G FG V+        +VAVK +   S   +E F  E  ++  LQH  LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 246
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           + L   + +    +I E+M   SL  FL  D   K+ L     I     IA+G+ ++   
Sbjct: 247 K-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR 303
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           +    IHRDL+A+N+L+   +  KI+DFGLAR+   +E
Sbjct: 304 N---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE------EVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++          +VAVK L     +  E +F  E L+I+K
Sbjct: 45  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
           L H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 83  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 136
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFG A++ G +E
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 171

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG G FG V+        +VAVK +   S   +E F  E  ++  LQH  LV
Sbjct: 15  ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 73
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           + L   + +    +I E+M   SL  FL  D   K+ L     I     IA+G+ ++   
Sbjct: 74  K-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR 130
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           +    IHRDL+A+N+L+   +  KI+DFGLAR+   +E
Sbjct: 131 N---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 165

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 85  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 138
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFG A++ G +E
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRN 565
           N+ +   +G+G F  V   R +L G+EVAV+ +  +  +   L++   E+ ++  L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++      +    L++EY      +VF +     R+   +AR    + I   + Y H 
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQ-IVSAVQYCHQ 131
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             +F I+HRDLKA N+LLD DMN KI+DFG +  F
Sbjct: 132 --KF-IVHRDLKAENLLLDADMNIKIADFGFSNEF 163

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           L  G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 30  LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 90  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+  L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 57  LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 170
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 205

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRN 565
           N+ +   +G+G F  V   R +L G+EVAV+ +  +  +   L++   E+ ++  L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++      +    L++EY      +VF +     R+   +AR    + I   + Y H 
Sbjct: 75  IVKLFEVIETEKTLYLVMEYASGG--EVFDYLVAHGRMKEKEARAKFRQ-IVSAVQYCHQ 131
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             +F I+HRDLKA N+LLD DMN KI+DFG +  F
Sbjct: 132 --KF-IVHRDLKAENLLLDADMNIKIADFGFSNEF 163

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLE---EFKNEMLLIAKLQHRNLVRILG 571
           LG G FG V  G+  L G +VAVK L+ Q  + L+   + + E+  +   +H +++++  
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
                 +  +++EY+    L  F +     RL   ++R  + + I  G+ Y H   R  +
Sbjct: 84  VISTPSDIFMVMEYVSGGEL--FDYICKNGRLDEKESR-RLFQQILSGVDYCH---RHMV 137
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
           +HRDLK  NVLLD  MN KI+DFGL+ M    E 
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 25/180 (13%)
Query: 504 AAATE------NFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLL 557
           AAA+E      N  +   +G G +G VYKG L +   VAVK  S  + Q     KN +  
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN-IYR 60
Query: 558 IAKLQHRNLVR-ILG----CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI 612
           +  ++H N+ R I+G        + E +L++EY PN SL  +L   T      W +   +
Sbjct: 61  VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD----WVSSCRL 116
Query: 613 IEGIAQGLLYLH-------HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
              + +GL YLH       HY +  I HRDL + NVL+  D    ISDFGL+    G+ L
Sbjct: 117 AHSVTRGLAYLHTELPRGDHY-KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 18/166 (10%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEE-VAVKRLSSQSGQG-------LEEFKNEMLL 557
           A      E ++G+GGFG V+KGRL+  +  VA+K L     +G        +EF+ E+ +
Sbjct: 17  ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIA 617
           ++ L H N+V++ G         +++E++P   L   L D  K   + W  ++ ++  IA
Sbjct: 77  MSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIA 132
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDR-DMN----PKISDFGLAR 658
            G+ Y+ + +   I+HRDL++ N+ L   D N     K++DF L++
Sbjct: 133 LGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 85/155 (54%), Gaps = 12/155 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEV----AVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  +  GE+V    A+K L  + S +  +E  +E  ++A + + ++ R+
Sbjct: 30  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           LG C+    + LI + MP   L  ++ +   K  +G Q  +     IA+G+ YL      
Sbjct: 90  LGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDR--- 143
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R++HRDL A NVL+    + KI+DFG A++ G +E
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 178

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 8/147 (5%)
Query: 512 MECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           +  ++G G FG VYKG+      V + ++   + +  + F+NE+ ++ K +H N++  +G
Sbjct: 40  LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 572 CCIEQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
              +    I + ++    SL   L    TK ++      I I    AQG+ YLH  +   
Sbjct: 100 YMTKDNLAI-VTQWCEGSSLYKHLHVQETKFQMF---QLIDIARQTAQGMDYLHAKN--- 152
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLA 657
           IIHRD+K++N+ L   +  KI DFGLA
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLA 179

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 19/176 (10%)
Query: 500 LASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEE----VAVKRLSSQSG-QGLEEFKN 553
           LA +   TE   ++  LG G FG V+KG  +  GE     V +K +  +SG Q  +   +
Sbjct: 24  LARIFKETELRKLKV-LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 82
Query: 554 EMLLIAKLQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKR--LLGWQARI 610
            ML I  L H ++VR+LG C   G  + L+ +Y+P  SL     D  ++    LG Q  +
Sbjct: 83  HMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSL----LDHVRQHRGALGPQLLL 136
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
                IA+G+ YL  +    ++HR+L A NVLL      +++DFG+A +   D+ Q
Sbjct: 137 NWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG G FG V+        +VAVK +   S   +E F  E  ++  LQH  LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 240
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFL-FDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           + L   + +    +I E+M   SL  FL  D   K+ L     I     IA+G+ ++   
Sbjct: 241 K-LHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR 297
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
           +    IHRDL+A+N+L+   +  KI+DFGLAR+
Sbjct: 298 N---YIHRDLRAANILVSASLVCKIADFGLARV 327

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 23/161 (14%)
Query: 514 CKLGEGGFGPVYKGRLL-NGEEVAVKRL---SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
            K+G+G FG V+K R    G++VA+K++   + + G  +   + E+ ++  L+H N+V +
Sbjct: 24  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNL 82
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI----------GIIEGIAQG 619
           +  C  +        Y   K     +FD  +  L G  + +           +++ +  G
Sbjct: 83  IEICRTKASP-----YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           L Y+H   R +I+HRD+KA+NVL+ RD   K++DFGLAR F
Sbjct: 138 LYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 175

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 19/176 (10%)
Query: 500 LASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEE----VAVKRLSSQSG-QGLEEFKN 553
           LA +   TE   ++  LG G FG V+KG  +  GE     V +K +  +SG Q  +   +
Sbjct: 6   LARIFKETELRKLKV-LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 64
Query: 554 EMLLIAKLQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKR--LLGWQARI 610
            ML I  L H ++VR+LG C   G  + L+ +Y+P  SL     D  ++    LG Q  +
Sbjct: 65  HMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSL----LDHVRQHRGALGPQLLL 118
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
                IA+G+ YL  +    ++HR+L A NVLL      +++DFG+A +   D+ Q
Sbjct: 119 NWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 23/161 (14%)
Query: 514 CKLGEGGFGPVYKGRLL-NGEEVAVKRL---SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
            K+G+G FG V+K R    G++VA+K++   + + G  +   + E+ ++  L+H N+V +
Sbjct: 24  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNL 82
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI----------GIIEGIAQG 619
           +  C  +        Y   K+    +FD  +  L G  + +           +++ +  G
Sbjct: 83  IEICRTKAS-----PYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           L Y+H   R +I+HRD+KA+NVL+ RD   K++DFGLAR F
Sbjct: 138 LYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 175

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLS-SQSGQGLEEFK-NEMLLIAKLQHRNLVRILGC 572
           K+GEG +G VYK +   GE  A+K++   +  +G+      E+ ++ +L+H N+V++   
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 573 CIEQGEKILILEYMPN---KSLDVF---LFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
              +   +L+ E++     K LDV    L   T K  L     + ++ GIA    Y H  
Sbjct: 69  IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA----YCHDR 119
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
              R++HRDLK  N+L++R+   KI+DFGLAR FG
Sbjct: 120 ---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLS-SQSGQGLEEFK-NEMLLIAKLQHRNLVRILGC 572
           K+GEG +G VYK +   GE  A+K++   +  +G+      E+ ++ +L+H N+V++   
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 573 CIEQGEKILILEYMPN---KSLDVF---LFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
              +   +L+ E++     K LDV    L   T K  L     + ++ GIA    Y H  
Sbjct: 69  IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA----YCHDR 119
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
              R++HRDLK  N+L++R+   KI+DFGLAR FG
Sbjct: 120 ---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLS-SQSGQGLEEFK-NEMLLIAKLQHRNLVRILGC 572
           K+GEG +G VYK +   GE  A+K++   +  +G+      E+ ++ +L+H N+V++   
Sbjct: 9   KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 573 CIEQGEKILILEYMPN---KSLDVF---LFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
              +   +L+ E++     K LDV    L   T K  L     + ++ GIA    Y H  
Sbjct: 69  IHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-----LQLLNGIA----YCHDR 119
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
              R++HRDLK  N+L++R+   KI+DFGLAR FG
Sbjct: 120 ---RVLHRDLKPQNLLINREGELKIADFGLARAFG 151

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE------EVAVKRLSS-QSGQGLEEFKNEMLLIAK 560
           +N ++   LG G FG VY+G++          +VAVK L    S Q   +F  E L+I+K
Sbjct: 45  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE------EVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++          +VAVK L     +  E +F  E L+I+K
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 191 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++       +  +VAVK L     +  E +F  E L+I+K
Sbjct: 31  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 91  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++       +  +VAVK L     +  E +F  E L+I+K
Sbjct: 37  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 97  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 156
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 157 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE------EVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++          +VAVK L     +  E +F  E L+I+K
Sbjct: 48  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 168 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE------EVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++          +VAVK L     +  E +F  E L+I+K
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++       +  +VAVK L     +  E +F  E L+I+K
Sbjct: 47  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 167 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE------EVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++          +VAVK L     +  E +F  E L+I+K
Sbjct: 22  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 82  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 142 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 23/161 (14%)
Query: 514 CKLGEGGFGPVYKGRLL-NGEEVAVKRL---SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
            K+G+G FG V+K R    G++VA+K++   + + G  +   + E+ ++  L+H N+V +
Sbjct: 23  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNL 81
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI----------GIIEGIAQG 619
           +  C  +        Y   K     +FD  +  L G  + +           +++ +  G
Sbjct: 82  IEICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 136
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           L Y+H   R +I+HRD+KA+NVL+ RD   K++DFGLAR F
Sbjct: 137 LYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 174

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 505 AATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFK-NEMLLIAKLQ 562
           +++  F    KLG G +  VYKG     G  VA+K +   S +G       E+ L+ +L+
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 563 HRNLVRILGCCIEQGEKILILEYMPN---KSLDVFLFDPTKKRL-------LGWQARIGI 612
           H N+VR+      + +  L+ E+M N   K +D      T + L         WQ     
Sbjct: 62  HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ----- 116
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
              + QGL + H     +I+HRDLK  N+L+++    K+ DFGLAR FG
Sbjct: 117 ---LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 515 KLGEGGFGPVYKGRLLNGEE---VAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           +LG+G FG VYK +  N E     A K + ++S + LE++  E+ ++A   H N+V++L 
Sbjct: 44  ELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
               +    +++E+    ++D  + +  ++ L   Q ++ + +     L YLH     +I
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQV-VCKQTLDALNYLHDN---KI 156
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLA 657
           IHRDLKA N+L   D + K++DFG++
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS 182

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAK 560
           +N ++   LG G FG VY+G++       +  +VAVK L    S Q   +F  E L+I+K
Sbjct: 57  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 117 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 176
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 177 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 515 KLGEGGFGPVYKGRLLNGEE---VAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           +LG+G FG VYK +  N E     A K + ++S + LE++  E+ ++A   H N+V++L 
Sbjct: 44  ELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
               +    +++E+    ++D  + +  ++ L   Q ++ + +     L YLH     +I
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQV-VCKQTLDALNYLHDN---KI 156
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLA 657
           IHRDLKA N+L   D + K++DFG++
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS 182

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 11/149 (7%)
Query: 516 LGEGGFGPVYKGRLL----NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRIL 570
           +G+G FG VY G  +    N  + A+K LS  +  Q +E F  E LL+  L H N++ ++
Sbjct: 29  IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 571 GCCIE-QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           G  +  +G   ++L YM +  L  F+  P +   +      G+   +A+G+ YL   +  
Sbjct: 89  GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL--QVARGMEYL---AEQ 143
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           + +HRDL A N +LD     K++DFGLAR
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLAR 172

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 23/161 (14%)
Query: 514 CKLGEGGFGPVYKGRLL-NGEEVAVKRL---SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
            K+G+G FG V+K R    G++VA+K++   + + G  +   + E+ ++  L+H N+V +
Sbjct: 24  AKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLLKHENVVNL 82
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI----------GIIEGIAQG 619
           +  C  +        Y   K     +FD  +  L G  + +           +++ +  G
Sbjct: 83  IEICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           L Y+H   R +I+HRD+KA+NVL+ RD   K++DFGLAR F
Sbjct: 138 LYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 175

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 10/146 (6%)
Query: 515 KLGEGGFGPVYKGRLLNGEE---VAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           +LG+G FG VYK +  N E     A K + ++S + LE++  E+ ++A   H N+V++L 
Sbjct: 44  ELGDGAFGKVYKAQ--NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
               +    +++E+    ++D  + +  ++ L   Q ++ + +     L YLH     +I
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQV-VCKQTLDALNYLHDN---KI 156
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLA 657
           IHRDLKA N+L   D + K++DFG++
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVS 182

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE------EVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++          +VAVK L     +  E +F  E L+I+K
Sbjct: 45  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + +++E M    L  FL +    P++   L     + +   I
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++       +  +VAVK L     +  E +F  E L+I+K
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + +++E M    L  FL +    P++   L     + +   I
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLN--GEEVAVKRLSSQSGQ---GLEEFKNEMLL--I 558
           A + +    ++GEG +G V+K R L   G  VA+KR+  Q+G+    L   +   +L  +
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 559 AKLQHRNLVRILGCCI-----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII 613
              +H N+VR+   C       + +  L+ E++ ++ L  +L D   +  +  +    ++
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             + +GL +LH +   R++HRDLK  N+L+      K++DFGLAR++
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           +LG G FG V  G+     +VA+K +   S    +EF  E  ++  L H  LV++ G C 
Sbjct: 15  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +Q    +I EYM N  L  +L +   +     Q  + + + + + + YL      + +HR
Sbjct: 74  KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHR 128
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           DL A N L++     K+SDFGL+R    DE
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 158

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRN 565
           N+ +   +G+G F  V   R +L G+EVAVK +  +  +   L++   E+ ++  L H N
Sbjct: 8   NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGW----QARIGIIEGIAQGLL 621
           +V++      +    L++EY     +  +L         GW    +AR      I   + 
Sbjct: 68  IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH------GWMKEKEAR-AKFRQIVSAVQ 120
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           Y H   +F I+HRDLKA N+LLD DMN KI+DFG +  F
Sbjct: 121 YCHQ--KF-IVHRDLKAENLLLDADMNIKIADFGFSNEF 156

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 496 PLFSLASVAAATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVK-----RLSSQSGQGLE 549
           P  SLA   A   N+ +   LGEG FG V        G++VA+K      L+    QG  
Sbjct: 3   PKSSLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG-- 59
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
             + E+  +  L+H +++++      + E I+++EY  N+  D  +    + ++   +AR
Sbjct: 60  RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEAR 116
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
               + I   + Y H   R +I+HRDLK  N+LLD  +N KI+DFGL+ + 
Sbjct: 117 -RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 163

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLN--GEEVAVKRLSSQSGQ---GLEEFKNEMLL--I 558
           A + +    ++GEG +G V+K R L   G  VA+KR+  Q+G+    L   +   +L  +
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 559 AKLQHRNLVRILGCCI-----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII 613
              +H N+VR+   C       + +  L+ E++ ++ L  +L D   +  +  +    ++
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             + +GL +LH +   R++HRDLK  N+L+      K++DFGLAR++
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L S + +  L +  +EM ++  + +H+N
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L           F+P+   +  L  +  +  
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 496 PLFSLASVAAATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVK-----RLSSQSGQGLE 549
           P  SLA   A   N+ +   LGEG FG V        G++VA+K      L+    QG  
Sbjct: 2   PKSSLAD-GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG-- 58
Query: 550 EFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
             + E+  +  L+H +++++      + E I+++EY  N+  D  +    + ++   +AR
Sbjct: 59  RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEAR 115
Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
               + I   + Y H   R +I+HRDLK  N+LLD  +N KI+DFGL+ + 
Sbjct: 116 -RFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLN--GEEVAVKRLSSQSGQ---GLEEFKNEMLL--I 558
           A + +    ++GEG +G V+K R L   G  VA+KR+  Q+G+    L   +   +L  +
Sbjct: 9   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 559 AKLQHRNLVRILGCCI-----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII 613
              +H N+VR+   C       + +  L+ E++ ++ L  +L D   +  +  +    ++
Sbjct: 69  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMM 126
Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             + +GL +LH +   R++HRDLK  N+L+      K++DFGLAR++
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY 170

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           +LG G FG V  G+     +VA+K +   S    +EF  E  ++  L H  LV++ G C 
Sbjct: 31  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +Q    +I EYM N  L  +L +   +     Q  + + + + + + YL      + +HR
Sbjct: 90  KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           DL A N L++     K+SDFGL+R    DE
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           +LG G FG V  G+     +VA+K +   S    +EF  E  ++  L H  LV++ G C 
Sbjct: 11  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +Q    +I EYM N  L  +L +   +     Q  + + + + + + YL      + +HR
Sbjct: 70  KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHR 124
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           DL A N L++     K+SDFGL+R    DE
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 154

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           +LG G FG V  G+     +VA+K +   S    +EF  E  ++  L H  LV++ G C 
Sbjct: 31  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +Q    +I EYM N  L  +L +   +     Q  + + + + + + YL      + +HR
Sbjct: 90  KQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           DL A N L++     K+SDFGL+R    DE
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           +LG G FG V  G+     +VA+K +   S    +EF  E  ++  L H  LV++ G C 
Sbjct: 16  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +Q    +I EYM N  L  +L +   +     Q  + + + + + + YL      + +HR
Sbjct: 75  KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           DL A N L++     K+SDFGL+R    DE
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           +LG G FG V  G+     +VA+K +   S    +EF  E  ++  L H  LV++ G C 
Sbjct: 16  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +Q    +I EYM N  L  +L +   +     Q  + + + + + + YL      + +HR
Sbjct: 75  KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHR 129
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           DL A N L++     K+SDFGL+R    DE
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
           +N ++   LG G FG VY+G++       +  +VAVK L     +  E +F  E L+I+K
Sbjct: 31  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + ++LE M    L  FL +    P++   L     + +   I
Sbjct: 91  FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+A+
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           +LG G FG V  G+     +VA+K +   S    +EF  E  ++  L H  LV++ G C 
Sbjct: 22  ELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +Q    +I EYM N  L  +L +   +     Q  + + + + + + YL      + +HR
Sbjct: 81  KQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLESK---QFLHR 135
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           DL A N L++     K+SDFGL+R    DE
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 165

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 13/173 (7%)
Query: 510 FSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVR 568
           F +   +G G +G VYKGR +   ++A  ++   +G   EE K E+ ++ K   HRN+  
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 569 ILGCCIEQG------EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
             G  I++       +  L++E+    S+   L   TK   L  +    I   I +GL +
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSV-TDLIKNTKGNTLKEEWIAYICREILRGLSH 144
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           LH +   ++IHRD+K  NVLL  +   K+ DFG++     D   G     +GT
Sbjct: 145 LHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIGT 192

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ + A L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
           E F +  KLGEG +G VYK      G+ VA+K++  +S   L+E   E+ ++ +    ++
Sbjct: 29  EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHV 86
Query: 567 VRILGCCIEQGEKILILEYMPNKSL-DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           V+  G   +  +  +++EY    S+ D+      + + L       I++   +GL YLH 
Sbjct: 87  VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHF 143
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
               R IHRD+KA N+LL+ + + K++DFG+A
Sbjct: 144 ---MRKIHRDIKAGNILLNTEGHAKLADFGVA 172

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 31/179 (17%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL--LNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAK 560
           +N  +   LGEG FG V K     L G      VAVK L  + S   L +  +E  ++ +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL---------------------FDPT 599
           + H +++++ G C + G  +LI+EY    SL  FL                      D  
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 600 KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +R L     I     I+QG+ YL   +  +++HRDL A N+L+      KISDFGL+R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 31/179 (17%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL--LNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAK 560
           +N  +   LGEG FG V K     L G      VAVK L  + S   L +  +E  ++ +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL---------------------FDPT 599
           + H +++++ G C + G  +LI+EY    SL  FL                      D  
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 600 KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +R L     I     I+QG+ YL   +  +++HRDL A N+L+      KISDFGL+R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L S + +  L +  +EM ++  + +H+N
Sbjct: 25  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L           ++P+   +  L  +  +  
Sbjct: 85  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 15/162 (9%)
Query: 505 AATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVK-----RLSSQSGQGLEEFKNEMLLI 558
           A   N+ +   LGEG FG V        G++VA+K      L+    QG    + E+  +
Sbjct: 1   AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISYL 58
Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
             L+H +++++      + E I+++EY  N+  D  +    + ++   +AR    + I  
Sbjct: 59  RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEAR-RFFQQIIS 114
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
            + Y H   R +I+HRDLK  N+LLD  +N KI+DFGL+ + 
Sbjct: 115 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 153

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L S + +  L +  +EM ++  + +H+N
Sbjct: 21  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L           ++P+   +  L  +  +  
Sbjct: 81  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L S + +  L +  +EM ++  + +H+N
Sbjct: 28  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L           ++P+   +  L  +  +  
Sbjct: 88  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L S + +  L +  +EM ++  + +H+N
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L           ++P+   +  L  +  +  
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 82/163 (50%), Gaps = 15/163 (9%)
Query: 504 AAATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVK-----RLSSQSGQGLEEFKNEMLL 557
            A   N+ +   LGEG FG V        G++VA+K      L+    QG    + E+  
Sbjct: 4   GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQG--RIEREISY 61
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIA 617
           +  L+H +++++      + E I+++EY  N+  D  +    + ++   +AR    + I 
Sbjct: 62  LRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV---QRDKMSEQEAR-RFFQQII 117
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             + Y H   R +I+HRDLK  N+LLD  +N KI+DFGL+ + 
Sbjct: 118 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 157

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L S + +  L +  +EM ++  + +H+N
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L           ++P+   +  L  +  +  
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L S + +  L +  +EM ++  + +H+N
Sbjct: 77  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L           ++P+   +  L  +  +  
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L S + +  L +  +EM ++  + +H+N
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L           ++P+   +  L  +  +  
Sbjct: 96  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L S + +  L +  +EM ++  + +H+N
Sbjct: 29  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L           ++P+   +  L  +  +  
Sbjct: 89  IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 16/159 (10%)
Query: 516 LGEGGFGPVYKGRLL-NGE----EVAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           LG G FG VYKG  + +GE     VA+K L  + S +  +E  +E  ++A +    + R+
Sbjct: 25  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYS 627
           LG C+    + L+ + MP   L     D  ++    LG Q  +     IA+G+ YL    
Sbjct: 85  LGICLTSTVQ-LVTQLMPYGCL----LDHVRENRGRLGSQDLLNWCMQIAKGMSYLED-- 137
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
             R++HRDL A NVL+    + KI+DFGLAR+   DE +
Sbjct: 138 -VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL--LNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAK 560
           +N  +   LGEG FG V K     L G      VAVK L  + S   L +  +E  ++ +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL---------------------FDPT 599
           + H +++++ G C + G  +LI+EY    SL  FL                      D  
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 600 KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +R L     I     I+QG+ YL   S   ++HRDL A N+L+      KISDFGL+R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSR 198

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/173 (33%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 516 LGEGGFGPVYKGRLLN-GEE-----VAVKRL-SSQSGQGLEEFKNEMLLIAKL-QHRNLV 567
           LG G FG V +      G+E     VAVK L S+      E   +E+ +++ L QH N+V
Sbjct: 46  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFL-------FDPTKKRLLGWQARIGIIEGIAQGL 620
            +LG C   G  ++I EY     L  FL        D    R L  +  +     +AQG+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE---LQGNTK 670
            +L   +    IHRD+ A NVLL      KI DFGLAR    D    ++GN +
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 215

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLE---EFKNEMLLIAKLQHRNLVRILG 571
           LG G FG V  G   L G +VAVK L+ Q  + L+   + K E+  +   +H +++++  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
                 +  +++EY+    L  F +     R+   +AR  + + I   + Y H   R  +
Sbjct: 79  VISTPTDFFMVMEYVSGGEL--FDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMV 132
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
           +HRDLK  NVLLD  MN KI+DFGL+ M    E 
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLE---EFKNEMLLIAKLQHRNLVRILG 571
           LG G FG V  G   L G +VAVK L+ Q  + L+   + K E+  +   +H +++++  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
                 +  +++EY+    L  F +     R+   +AR  + + I   + Y H   R  +
Sbjct: 79  VISTPTDFFMVMEYVSGGEL--FDYICKHGRVEEMEAR-RLFQQILSAVDYCH---RHMV 132
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
           +HRDLK  NVLLD  MN KI+DFGL+ M    E 
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLN-GEE-----VAVKRL-SSQSGQGLEEFKNEMLLIAKL 561
           N      LG G FG V +      G+E     VAVK L S+      E   +E+ +++ L
Sbjct: 47  NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 562 -QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-------FDPTKKRLLGWQARIGII 613
            QH N+V +LG C   G  ++I EY     L  FL        D    R L  +  +   
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE---LQGNTK 670
             +AQG+ +L   +    IHRD+ A NVLL      KI DFGLAR    D    ++GN +
Sbjct: 167 SQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 20/180 (11%)
Query: 504 AAATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKL 561
           A   E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L
Sbjct: 1   APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEG 615
            H N+V+  G   E   + L LEY     L      D+ + +P  +R             
Sbjct: 61  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQ 111
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           +  G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 112 LMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRN 565
           N+ +   +G+G F  V   R +L G+EVAVK +  +  +   L++   E+ +   L H N
Sbjct: 15  NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++      +    L+ EY      +VF +     R    +AR    + I   + Y H 
Sbjct: 75  IVKLFEVIETEKTLYLVXEYASGG--EVFDYLVAHGRXKEKEARAKFRQ-IVSAVQYCHQ 131
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             +F I+HRDLKA N+LLD D N KI+DFG +  F
Sbjct: 132 --KF-IVHRDLKAENLLLDADXNIKIADFGFSNEF 163

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 12/152 (7%)
Query: 516 LGEGGFGPVYKGRLLNGEE-VAVKRLS----SQSGQGLEEFK-NEMLLIAKLQHRNLVRI 569
           LGEG F  VYK R  N  + VA+K++     S++  G+      E+ L+ +L H N++ +
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           L     +    L+ ++M    L+V + D     +L        +    QGL YLH +   
Sbjct: 78  LDAFGHKSNISLVFDFM-ETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW-- 132
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            I+HRDLK +N+LLD +   K++DFGLA+ FG
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            + E  ++  +LG+G FG VY+G    ++ GE    VAVK ++ S S +   EF NE  +
Sbjct: 14  VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLG-----WQARI 610
           +      ++VR+LG   +    ++++E M +  L  +L    P  +   G      Q  I
Sbjct: 74  MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +   IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 134 QMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEM 555
           L S+ SV    + ++   K+G+G  G VY    +  G+EVA+++++ Q     E   NE+
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 556 LLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
           L++ + ++ N+V  L   +   E  +++EY+   SL     D   +  +       +   
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             Q L +LH     ++IHRD+K+ N+LL  D + K++DFG       +  Q     +VGT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSEMVGT 179

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            + E  ++  +LG+G FG VY+G    ++ GE    VAVK ++ S S +   EF NE  +
Sbjct: 14  VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLG-----WQARI 610
           +      ++VR+LG   +    ++++E M +  L  +L    P  +   G      Q  I
Sbjct: 74  MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +   IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 134 QMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            + E  ++  +LG+G FG VY+G    ++ GE    VAVK ++ S S +   EF NE  +
Sbjct: 14  VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLG-----WQARI 610
           +      ++VR+LG   +    ++++E M +  L  +L    P  +   G      Q  I
Sbjct: 74  MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +   IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 134 QMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            + E  ++  +LG+G FG VY+G    ++ GE    VAVK ++ S S +   EF NE  +
Sbjct: 14  VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLG-----WQARI 610
           +      ++VR+LG   +    ++++E M +  L  +L    P  +   G      Q  I
Sbjct: 74  MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +   IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 134 QMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            + E  ++  +LG+G FG VY+G    ++ GE    VAVK ++ S S +   EF NE  +
Sbjct: 11  VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 70
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLG-----WQARI 610
           +      ++VR+LG   +    ++++E M +  L  +L    P  +   G      Q  I
Sbjct: 71  MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 130
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +   IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 131 QMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 175

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEE--FKNEMLLIAKLQH 563
            E +++ C LG+G FG V K +  +  +E AVK ++  S +  +      E+ L+ KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLY 622
            N++++     +     ++ E      L    FD   K++         II+ +  G+ Y
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 623 LHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTK 670
           +H ++   I+HRDLK  N+LL   ++D + KI DFGL+  F     Q NTK
Sbjct: 137 MHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTK 179

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEM 555
           L S+ SV    + ++   K+G+G  G VY    +  G+EVA+++++ Q     E   NE+
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 556 LLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
           L++ + ++ N+V  L   +   E  +++EY+   SL     D   +  +       +   
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             Q L +LH     ++IHRD+K+ N+LL  D + K++DFG       ++ + +T  +VGT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 179

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE 575
           +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H NLV++LG  +E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 576 Q-GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           + G   ++ EYM   SL  +L     + +LG    +     + + + YL   +    +HR
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 313
Query: 635 DLKASNVLLDRDMNPKISDFGLAR 658
           DL A NVL+  D   K+SDFGL +
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK 337

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEE--FKNEMLLIAKLQH 563
            E +++ C LG+G FG V K +  +  +E AVK ++  S +  +      E+ L+ KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLY 622
            N++++     +     ++ E      L    FD   K++         II+ +  G+ Y
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 623 LHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTK 670
           +H ++   I+HRDLK  N+LL   ++D + KI DFGL+  F     Q NTK
Sbjct: 137 MHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTK 179

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEE--FKNEMLLIAKLQH 563
            E +++ C LG+G FG V K +  +  +E AVK ++  S +  +      E+ L+ KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLY 622
            N++++     +     ++ E      L    FD   K++         II+ +  G+ Y
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 623 LHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTK 670
           +H ++   I+HRDLK  N+LL   ++D + KI DFGL+  F     Q NTK
Sbjct: 137 MHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTK 179

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG +G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 66  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 116
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            + E  ++  +LG+G FG VY+G    ++ GE    VAVK ++ S S +   EF NE  +
Sbjct: 13  VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 72
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLG-----WQARI 610
           +      ++VR+LG   +    ++++E M +  L  +L    P  +   G      Q  I
Sbjct: 73  MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 132
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +   IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 133 QMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEM 555
           L S+ SV    + ++   K+G+G  G VY    +  G+EVA+++++ Q     E   NE+
Sbjct: 9   LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 68
Query: 556 LLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
           L++ + ++ N+V  L   +   E  +++EY+   SL     D   +  +       +   
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             Q L +LH     ++IHRD+K+ N+LL  D + K++DFG       +  Q     +VGT
Sbjct: 125 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGT 179

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEM 555
           L S+ SV    + ++   K+G+G  G VY    +  G+EVA+++++ Q     E   NE+
Sbjct: 10  LRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEI 69
Query: 556 LLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
           L++ + ++ N+V  L   +   E  +++EY+   SL     D   +  +       +   
Sbjct: 70  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 125
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             Q L +LH     ++IHRD+K+ N+LL  D + K++DFG       +  Q     +VGT
Sbjct: 126 CLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGT 180

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 499 SLASVAAATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLS-SQSGQGLEEFK-NEM 555
           S A  A + + +    KLGEG +G VYK    +  E VA+KR+      +G+      E+
Sbjct: 25  SAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREV 84
Query: 556 LLIAKLQHRNLVRILGCCIEQGEKILILEYMPN---KSLDVFLFDPTKKRLLGWQARIGI 612
            L+ +LQHRN++ +           LI EY  N   K +D       K   +  +     
Sbjct: 85  SLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMD-------KNPDVSMRVIKSF 137
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNP--KISDFGLARMFG 661
           +  +  G+ + H  SR R +HRDLK  N+LL   D    P  KI DFGLAR FG
Sbjct: 138 LYQLINGVNFCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE 575
           +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H NLV++LG  +E
Sbjct: 29  IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 576 Q-GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           + G   ++ EYM   SL  +L     + +LG    +     + + + YL   +    +HR
Sbjct: 86  EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 141
Query: 635 DLKASNVLLDRDMNPKISDFGLAR 658
           DL A NVL+  D   K+SDFGL +
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK 165

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
Query: 500 LASVAAATENFSMECKLGEGGFGPVYKGRLLNGE----EVAVKRLSSQ--SGQGLEEFKN 553
           L  V    + F++   LG+G FG V + +L   +    +VAVK L +   +   +EEF  
Sbjct: 15  LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 554 EMLLIAKLQHRNLVRILGCCIEQGEK------ILILEYMPNKSLDVFLFDPTKKRL---- 603
           E   + +  H ++ +++G  +    K      ++IL +M +  L  FL      R+    
Sbjct: 75  EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL---ASRIGENP 131
Query: 604 --LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR-MF 660
             L  Q  +  +  IA G+ YL   S    IHRDL A N +L  DM   ++DFGL+R ++
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 661 GGD 663
            GD
Sbjct: 189 SGD 191

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 516 LGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           LG G FG V+K      G ++A K + ++  +  EE KNE+ ++ +L H NL+++     
Sbjct: 97  LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
            + + +L++EY+    L   + D +    L     I  ++ I +G+ ++H   +  I+H 
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYN--LTELDTILFMKQICEGIRHMH---QMYILHL 211
Query: 635 DLKASNVL-LDRDMNP-KISDFGLARMF 660
           DLK  N+L ++RD    KI DFGLAR +
Sbjct: 212 DLKPENILCVNRDAKQIKIIDFGLARRY 239

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 508 ENFSMECKLGEGGFGPVY--KGRLLNGEEVAVKRL---SSQSGQGLEEFKNEMLLIAKLQ 562
           E + +  KLG GG   VY  +  +LN + VA+K +     +  + L+ F+ E+   ++L 
Sbjct: 11  ERYKIVDKLGGGGMSTVYLAEDTILNIK-VAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H+N+V ++    E     L++EY+   +L  ++        L     I     I  G+ +
Sbjct: 70  HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKH 126
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            H     RI+HRD+K  N+L+D +   KI DFG+A+      L   T  ++GT
Sbjct: 127 AH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-QTNHVLGT 175

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 516 LGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           LG+G FG   K      GE + +K L     +    F  E+ ++  L+H N+++ +G   
Sbjct: 18  LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           +      I EY+   +L   +   +      W  R+   + IA G+ YLH  +   IIHR
Sbjct: 78  KDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHR 132
Query: 635 DLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
           DL + N L+  + N  ++DFGLAR+   ++ Q
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE 575
           +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H NLV++LG  +E
Sbjct: 14  IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 576 Q-GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           + G   ++ EYM   SL  +L     + +LG    +     + + + YL   +    +HR
Sbjct: 71  EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 126
Query: 635 DLKASNVLLDRDMNPKISDFGLAR 658
           DL A NVL+  D   K+SDFGL +
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK 150

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE 575
           +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H NLV++LG  +E
Sbjct: 20  IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 576 Q-GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR 634
           + G   ++ EYM   SL  +L     + +LG    +     + + + YL   +    +HR
Sbjct: 77  EKGGLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHR 132
Query: 635 DLKASNVLLDRDMNPKISDFGLAR 658
           DL A NVL+  D   K+SDFGL +
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK 156

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 506 ATENFSMECKLGEGGFGPVY------KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIA 559
           + E +    K+GEG FG          GR    +E+ + R+SS+     EE + E+ ++A
Sbjct: 22  SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER---EESRREVAVLA 78
Query: 560 KLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
            ++H N+V+      E G   ++++Y      D+F     +K +L  + +I  ++   Q 
Sbjct: 79  NMKHPNIVQYRESFEENGSLYIVMDYCEGG--DLFKRINAQKGVLFQEDQI--LDWFVQI 134
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
            L L H    +I+HRD+K+ N+ L +D   ++ DFG+AR+ 
Sbjct: 135 CLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 516 LGEGGFGPVYKGRLLN-GEE-----VAVKRL-SSQSGQGLEEFKNEMLLIAKL-QHRNLV 567
           LG G FG V +      G+E     VAVK L S+      E   +E+ +++ L QH N+V
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +LG C   G  ++I EY     L  FL    K R+L       I    A     LH  S
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 628 RF----------RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE---LQGNTK 670
           +             IHRD+ A NVLL      KI DFGLAR    D    ++GN +
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 514 CKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
            K+GEG  G V   R  + G +VAVK +  +  Q  E   NE++++   QH N+V +   
Sbjct: 51  VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
            +   E  +++E++   +L     D   +  L  +    + E + Q L YLH      +I
Sbjct: 111 YLVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VI 163
Query: 633 HRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           HRD+K+ ++LL  D   K+SDFG       D      K +VGT
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGT 204

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 80/179 (44%), Gaps = 29/179 (16%)
Query: 516 LGEGGFGPVYKGRLLN-GEE-----VAVKRL-SSQSGQGLEEFKNEMLLIAKL-QHRNLV 567
           LG G FG V +      G+E     VAVK L S+      E   +E+ +++ L QH N+V
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG------------ 615
            +LG C   G  ++I EY     L  FL    K R+L       I               
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 616 -IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE---LQGNTK 670
            +AQG+ +L   +    IHRD+ A NVLL      KI DFGLAR    D    ++GN +
Sbjct: 172 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 227

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 78/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 37  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L  C +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 97  PFFVK-LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 147
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 148 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSS---QSGQGLEEFKNEMLLIAKLQHR 564
           NF +E K+G G F  VY+   LL+G  VA+K++        +   +   E+ L+ +L H 
Sbjct: 33  NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTK-KRLLGWQARIGIIEGIAQGLLYL 623
           N+++     IE  E  ++LE      L   +    K KRL+  +        +   L ++
Sbjct: 93  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H  SR R++HRD+K +NV +      K+ D GL R F       ++  +VGT
Sbjct: 153 H--SR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGT 199

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            + E  ++  +LG+G FG VY+G    ++ GE    VAVK ++ S S +   EF NE  +
Sbjct: 14  VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLG-----WQARI 610
           +      ++VR+LG   +    ++++E M +  L  +L    P  +   G      Q  I
Sbjct: 74  MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 133
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +   IA G+ YL+     + +HR+L A N ++  D   KI DFG+ R
Sbjct: 134 QMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 178

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 56  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 110
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 168
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 169 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHR 564
            E++ +   LGEG  G V      +  E VAVK +  +      E  K E+ +   L H 
Sbjct: 5   VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSL------DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N+V+  G   E   + L LEY     L      D+ + +P  +R             +  
Sbjct: 65  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF---------HQLMA 115
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G++YLH      I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 174
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 175 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            + E  ++  +LG+G FG VY+G    ++ GE    VAVK ++ S S +   EF NE  +
Sbjct: 15  VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 74
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKRLLG-----WQARI 610
           +      ++VR+LG   +    ++++E M +  L  +L    P  +   G      Q  I
Sbjct: 75  MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 134
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +   IA G+ YL+     + +HR+L A N ++  D   KI DFG+ R
Sbjct: 135 QMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR 179

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 24/166 (14%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH---- 563
           +F     LG+G FG V K R  L+    A+K++   + + L    +E++L+A L H    
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVV 65
Query: 564 ---------RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPT--KKRLLGWQARIGI 612
                    RN V+ +    ++    + +EY  N++L   +      ++R   W+    +
Sbjct: 66  RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR----L 121
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              I + L Y+H      IIHRDLK  N+ +D   N KI DFGLA+
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L              +   +  + ++  +  
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 64  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 118
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 119 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 176
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 177 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 66  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 120
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 121 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 178
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 179 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 116
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 117 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 174
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 175 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 161
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 162 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 219
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 220 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 26/177 (14%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L              +   +  + ++  +  
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR     +   NT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 27/186 (14%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLN-GEE-----VAVKRL-SSQSGQGLEEFKNEMLLIAKL 561
           N      LG G FG V +      G+E     VAVK L S+      E   +E+ +++ L
Sbjct: 47  NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 562 -QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTK--KRLLGWQ 607
            QH N+V +LG C   G  ++I EY     L  FL           ++P+   +  L  +
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSR 166
Query: 608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE--- 664
             +     +AQG+ +L   +    IHRD+ A NVLL      KI DFGLAR    D    
Sbjct: 167 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 223
Query: 665 LQGNTK 670
           ++GN +
Sbjct: 224 VKGNAR 229

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L              +   +  + ++  +  
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 510 FSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQHRN 565
           + +  KLG+G +G V+K      GE VAVK++      S      F+  M+L     H N
Sbjct: 11  YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 566 LVRILGCCIEQGEK--ILILEYMPNKSLDVF---LFDPTKKRLLGWQARIGIIEGIAQGL 620
           +V +L       ++   L+ +YM      V    + +P  K+ + +Q        + + +
Sbjct: 71  IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQ--------LIKVI 122
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
            YLH      ++HRD+K SN+LL+ + + K++DFGL+R F
Sbjct: 123 KYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSF 159

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 33  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 87
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 88  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 145
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 146 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L              +   +  + ++  +  
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 519 GGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRIL-----GCC 573
           G FG V+K +L+N + VAVK    Q  Q  +  + E+     ++H NL++ +     G  
Sbjct: 26  GRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH-------- 625
           +E  E  LI  +    SL  +L    K  ++ W     + E +++GL YLH         
Sbjct: 84  LEV-ELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             +  I HRD K+ NVLL  D+   ++DFGLA  F   +  G+T   VGT
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGT 188

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L              +   +  + ++  +  
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 41  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 95
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 96  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 153
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 154 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L              +   +  + ++  +  
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 36  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 90
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 91  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 148
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 149 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        G  VAVK+L         +F+ E+ ++  L    +V+ 
Sbjct: 30  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 570 LGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G     G + L  ++EY+P+  L  FL     +    RLL + ++I       +G+ YL
Sbjct: 90  RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL 143
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
              SR R +HRDL A N+L++ + + KI+DFGLA++   D+
Sbjct: 144 G--SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 47  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 101
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 159
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 160 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        G  VAVK+L         +F+ E+ ++  L    +V+ 
Sbjct: 18  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 570 LGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G     G + L  ++EY+P+  L  FL     +    RLL + ++I       +G+ YL
Sbjct: 78  RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL 131
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
              SR R +HRDL A N+L++ + + KI+DFGLA++   D+
Sbjct: 132 G--SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 169

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        G  VAVK+L         +F+ E+ ++  L    +V+ 
Sbjct: 17  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 570 LGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G     G + L  ++EY+P+  L  FL     +    RLL + ++I       +G+ YL
Sbjct: 77  RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL 130
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
              SR R +HRDL A N+L++ + + KI+DFGLA++   D+
Sbjct: 131 G--SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 168

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++     QG + FKN E+ ++ KL H N+VR+    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLAR 658
            F I HRD+K  N+LLD D    K+ DFG A+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 496 PLFSLASVAAATENFSMECKLGEGGFGPVYKGR--LLNGE--EVAVKRLSS---QSGQGL 548
           PL SL  +    +   +E KLG+G FG V +G     +G+   VAVK L        + +
Sbjct: 7   PLQSLTCLIGEKDLRLLE-KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM 65
Query: 549 EEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQA 608
           ++F  E+  +  L HRNL+R+ G  +    K ++ E  P  SL   L       LLG  +
Sbjct: 66  DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS 124
Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL-DRDMNPKISDFGLAR 658
           R  +   +A+G+ YL      R IHRDL A N+LL  RD+  KI DFGL R
Sbjct: 125 RYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLV-KIGDFGLMR 169

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++     QG + FKN E+ ++ KL H N+VR+    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLAR 658
            F I HRD+K  N+LLD D    K+ DFG A+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 95  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 152
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 153 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 94
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 95  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 152
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 153 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 16/171 (9%)
Query: 496 PLFSLASVAAATENFSMECKLGEGGFGPVYKGR--LLNGE--EVAVKRLSS---QSGQGL 548
           PL SL  +    +   +E KLG+G FG V +G     +G+   VAVK L        + +
Sbjct: 7   PLQSLTCLIGEKDLRLLE-KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAM 65
Query: 549 EEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQA 608
           ++F  E+  +  L HRNL+R+ G  +    K ++ E  P  SL   L       LLG  +
Sbjct: 66  DDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLS 124
Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL-DRDMNPKISDFGLAR 658
           R  +   +A+G+ YL      R IHRDL A N+LL  RD+  KI DFGL R
Sbjct: 125 RYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLV-KIGDFGLMR 169

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 515 KLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG+G FG V   R        G  VAVK+L         +F+ E+ ++  L    +V+ 
Sbjct: 14  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 570 LGCCIEQG--EKILILEYMPNKSLDVFLFDPTKK----RLLGWQARIGIIEGIAQGLLYL 623
            G     G  E  L++EY+P+  L  FL     +    RLL + ++I       +G+ YL
Sbjct: 74  RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYL 127
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
              SR R +HRDL A N+L++ + + KI+DFGLA++   D+
Sbjct: 128 G--SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 165

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 515 KLGEGGFGPVYKGR--LLNGE--EVAVKRLSS---QSGQGLEEFKNEMLLIAKLQHRNLV 567
           KLG+G FG V +G     +G+   VAVK L        + +++F  E+  +  L HRNL+
Sbjct: 19  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R+ G  +    K ++ E  P  SL   L       LLG  +R  +   +A+G+ YL    
Sbjct: 79  RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 134
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             R IHRDL A N+LL      KI DFGL R
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMR 163

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++     QG + FKN E+ ++ KL H N+VR+    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVL----QG-KAFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLAR 658
            F I HRD+K  N+LLD D    K+ DFG A+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRN 565
           E+  +  ++G G FG V+ GRL  +   VAVK         L+ +F  E  ++ +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +VR++G C ++    +++E +  +  D   F  T+   L  +  + ++   A G+ YL  
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                 IHRDL A N L+      KISDFG++R
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 83  YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLAR 658
            F I HRD+K  N+LLD D    K+ DFG A+
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRN 565
           E+  +  ++G G FG V+ GRL  +   VAVK         L+ +F  E  ++ +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +VR++G C ++    +++E +  +  D   F  T+   L  +  + ++   A G+ YL  
Sbjct: 174 IVRLIGVCTQKQPIYIVMELV--QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                 IHRDL A N L+      KISDFG++R
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 29  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 83
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 84  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 141
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 142 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 82
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 83  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 140
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLARMF 660
            F I HRD+K  N+LLD D    K+ DFG A+  
Sbjct: 141 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVY--------KGRLLNGEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V         K +      VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 89  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L              +   +  + ++  +  
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 35  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L              +   +  + ++  +  
Sbjct: 95  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCC 573
           +G G FG VY+ +L + GE VA+K++        + FKN E+ ++ KL H N+VR+    
Sbjct: 32  IGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFF 86
Query: 574 IEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              GEK       L+L+Y+P     V       K+ L        +  + + L Y+H   
Sbjct: 87  YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS-- 144
Query: 628 RFRIIHRDLKASNVLLDRDMNP-KISDFGLAR 658
            F I HRD+K  N+LLD D    K+ DFG A+
Sbjct: 145 -FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 175

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L              +   +  + ++  +  
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   +I+DFGLAR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 13/171 (7%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRN 565
           E F+   ++G+G FG VYKG   + +EV   ++    ++   +E+ + E+ ++++     
Sbjct: 19  ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 566 LVRILGCCIEQGEKILILEYMPNKS-LDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           + R  G  ++  +  +I+EY+   S LD+    P ++  +       I+  I +GL YLH
Sbjct: 79  ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLH 133
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
                R IHRD+KA+NVLL    + K++DFG+A      +++ N    VGT
Sbjct: 134 SE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGT 179

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 30  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L              +   +  + ++  +  
Sbjct: 90  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 32  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+EY    +L  +L              +   +  + ++  +  
Sbjct: 92  IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH---- 563
           +F     LG+G FG V K R  L+    A+K++   + + L    +E++L+A L H    
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVV 65
Query: 564 ---------RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPT--KKRLLGWQARIGI 612
                    RN V+ +    ++    + +EY  N +L   +      ++R   W+    +
Sbjct: 66  RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR----L 121
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              I + L Y+H      IIHRDLK  N+ +D   N KI DFGLA+
Sbjct: 122 FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 515 KLGEGGFGPVYKGR--LLNGE--EVAVKRLSS---QSGQGLEEFKNEMLLIAKLQHRNLV 567
           KLG+G FG V +G     +G+   VAVK L        + +++F  E+  +  L HRNL+
Sbjct: 15  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R+ G  +    K ++ E  P  SL   L       LLG  +R  +   +A+G+ YL    
Sbjct: 75  RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 628 RFRIIHRDLKASNVLL-DRDMNPKISDFGLAR 658
             R IHRDL A N+LL  RD+  KI DFGL R
Sbjct: 131 --RFIHRDLAARNLLLATRDLV-KIGDFGLMR 159

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 515 KLGEGGFGPVYKGR--LLNGE--EVAVKRLSS---QSGQGLEEFKNEMLLIAKLQHRNLV 567
           KLG+G FG V +G     +G+   VAVK L        + +++F  E+  +  L HRNL+
Sbjct: 15  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R+ G  +    K ++ E  P  SL   L       LLG  +R  +   +A+G+ YL    
Sbjct: 75  RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 628 RFRIIHRDLKASNVLL-DRDMNPKISDFGLAR 658
             R IHRDL A N+LL  RD+  KI DFGL R
Sbjct: 131 --RFIHRDLAARNLLLATRDLV-KIGDFGLMR 159

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 21/156 (13%)
Query: 515 KLGEGGFGPVYKGRLLNGEE-VAVKRLS-SQSGQGLEEFK-NEMLLIAKLQHRNLVRILG 571
           K+GEG +G V+K +     E VA+KR+      +G+      E+ L+ +L+H+N+VR+  
Sbjct: 9   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 572 CCIEQGEKILILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
                 +  L+ E+  ++ L  +        DP   +   +Q        + +GL + H 
Sbjct: 69  VLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQ--------LLKGLGFCH- 118
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            SR  ++HRDLK  N+L++R+   K++DFGLAR FG
Sbjct: 119 -SR-NVLHRDLKPQNLLINRNGELKLADFGLARAFG 152

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           KLGEG +  VYKG+  L    VA+K  RL  + G      + E+ L+  L+H N+V +  
Sbjct: 9   KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLHD 67
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
               +    L+ EY+ +K L  +L D     ++        +  + +GL Y H   R ++
Sbjct: 68  IIHTEKSLTLVFEYL-DKDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCH---RQKV 121
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLAR 658
           +HRDLK  N+L++     K++DFGLAR
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLAR 148

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 515 KLGEGGFGPVYKGR--LLNGE--EVAVKRLSS---QSGQGLEEFKNEMLLIAKLQHRNLV 567
           KLG+G FG V +G     +G+   VAVK L        + +++F  E+  +  L HRNL+
Sbjct: 19  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R+ G  +    K ++ E  P  SL   L       LLG  +R  +   +A+G+ YL    
Sbjct: 79  RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 134
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             R IHRDL A N+LL      KI DFGL R
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMR 163

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 515 KLGEGGFGPVYKGR--LLNGE--EVAVKRLSS---QSGQGLEEFKNEMLLIAKLQHRNLV 567
           KLG+G FG V +G     +G+   VAVK L        + +++F  E+  +  L HRNL+
Sbjct: 15  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R+ G  +    K ++ E  P  SL   L       LLG  +R  +   +A+G+ YL    
Sbjct: 75  RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESK- 130
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             R IHRDL A N+LL      KI DFGL R
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMR 159

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 513 ECKLGEGGFGPVYKG--RLLNGE-EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVR 568
           + +LG G FG V +G  R+   + +VA+K L   + +   EE   E  ++ +L +  +VR
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI------IEGIAQGLLY 622
           ++G C  Q E ++++  M           P  K L+G +  I +      +  ++ G+ Y
Sbjct: 75  LIGVC--QAEALMLVMEMAGGG-------PLHKFLVGKREEIPVSNVAELLHQVSMGMKY 125
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           L   +    +HRDL A NVLL      KISDFGL++  G D+
Sbjct: 126 LEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKR-LSSQSGQGLEEFK-NEMLLIAKLQHRNLVRILGC 572
           +GEG +G V K R  + G  VA+K+ L S   + +++    E+ L+ +L+H NLV +L  
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
           C ++    L+ E++ +  LD     P     L +Q     +  I  G+ + H ++   II
Sbjct: 93  CKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHSHN---II 146
Query: 633 HRDLKASNVLLDRDMNPKISDFGLARMFGG 662
           HRD+K  N+L+ +    K+ DFG AR    
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAA 176

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 20/188 (10%)
Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQ---GLEEFK 552
           +F   S A  ++ +  +  LG+G FG V   +  + G+E AVK +S +  +     E   
Sbjct: 15  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 553 NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP--TKKRLLGWQARI 610
            E+ L+ +L H N++++     ++G   L+ E      L    FD   ++KR     A  
Sbjct: 75  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDA-A 129
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGGDELQG 667
            II  +  G+ Y+H   + +I+HRDLK  N+LL+   +D N +I DFGL+  F   E   
Sbjct: 130 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASK 183
Query: 668 NTKRIVGT 675
             K  +GT
Sbjct: 184 KMKDKIGT 191

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 82/196 (41%), Gaps = 34/196 (17%)
Query: 509 NFSMECKLGEGGFGPVYKGRLLN-GEE-----VAVKRL-SSQSGQGLEEFKNEMLLIAKL 561
           N      LG G FG V +      G+E     VAVK L S+      E   +E+ +++ L
Sbjct: 32  NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 91
Query: 562 -QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--------------------FDPTK 600
            QH N+V +LG C   G  ++I EY     L  FL                     D   
Sbjct: 92  GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKED 151
Query: 601 KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
            R L  +  +     +AQG+ +L   +    IHRD+ A NVLL      KI DFGLAR  
Sbjct: 152 GRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 208
Query: 661 GGDE---LQGNTKRIV 673
             D    ++GN +  V
Sbjct: 209 MNDSNYIVKGNARLPV 224

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 20/188 (10%)
Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQ---GLEEFK 552
           +F   S A  ++ +  +  LG+G FG V   +  + G+E AVK +S +  +     E   
Sbjct: 38  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 553 NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP--TKKRLLGWQARI 610
            E+ L+ +L H N++++     ++G   L+ E      L    FD   ++KR     A  
Sbjct: 98  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDA-A 152
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGGDELQG 667
            II  +  G+ Y+H   + +I+HRDLK  N+LL+   +D N +I DFGL+  F   E   
Sbjct: 153 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASK 206
Query: 668 NTKRIVGT 675
             K  +GT
Sbjct: 207 KMKDKIGT 214

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 89/177 (50%), Gaps = 10/177 (5%)
Query: 500 LASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLI 558
           + SV    + ++   K+G+G  G VY    +  G+EVA+++++ Q     E   NE+L++
Sbjct: 13  IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
            + ++ N+V  L   +   E  +++EY+   SL     D   +  +       +     Q
Sbjct: 73  RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQ 128
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            L +LH     ++IHR++K+ N+LL  D + K++DFG       ++ + +T  +VGT
Sbjct: 129 ALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 180

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 20/188 (10%)
Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQ---GLEEFK 552
           +F   S A  ++ +  +  LG+G FG V   +  + G+E AVK +S +  +     E   
Sbjct: 39  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 553 NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP--TKKRLLGWQARI 610
            E+ L+ +L H N++++     ++G   L+ E      L    FD   ++KR     A  
Sbjct: 99  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDA-A 153
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGGDELQG 667
            II  +  G+ Y+H   + +I+HRDLK  N+LL+   +D N +I DFGL+  F   E   
Sbjct: 154 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASK 207
Query: 668 NTKRIVGT 675
             K  +GT
Sbjct: 208 KMKDKIGT 215

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 80/153 (52%), Gaps = 19/153 (12%)
Query: 516 LGEGGFGPV-----YKGRLLNGEEVAVKRLSSQSGQGLE---EFKNEMLLIAKLQHRNLV 567
           LGEG FG V     YK +    ++VA+K +S Q  +  +     + E+  +  L+H +++
Sbjct: 17  LGEGSFGKVKLATHYKTQ----QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++        + ++++EY   +  D  +    KKR+   + R    + I   + Y H   
Sbjct: 73  KLYDVITTPTDIVMVIEYAGGELFDYIV---EKKRMTEDEGR-RFFQQIICAIEYCH--- 125
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           R +I+HRDLK  N+LLD ++N KI+DFGL+ + 
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+ Y    +L  +L              +   +  + ++  +  
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 20/188 (10%)
Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQ---GLEEFK 552
           +F   S A  ++ +  +  LG+G FG V   +  + G+E AVK +S +  +     E   
Sbjct: 21  MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 553 NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP--TKKRLLGWQARI 610
            E+ L+ +L H N++++     ++G   L+ E      L    FD   ++KR     A  
Sbjct: 81  REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDA-A 135
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGGDELQG 667
            II  +  G+ Y+H   + +I+HRDLK  N+LL+   +D N +I DFGL+  F   E   
Sbjct: 136 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASK 189
Query: 668 NTKRIVGT 675
             K  +GT
Sbjct: 190 KMKDKIGT 197

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 22  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P  +   +L   +   +I
Sbjct: 82  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 141
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 142 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 92  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 10  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 70  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 120
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 121 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 23  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 83  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 170

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 548 LEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQ 607
           +E+   E+ ++ KL H N+V+++    +  E  L + +       V    PT K L   Q
Sbjct: 80  IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLKPLSEDQ 138
Query: 608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF-GGDELQ 666
           AR    + + +G+ YLH+    +IIHRD+K SN+L+  D + KI+DFG++  F G D L 
Sbjct: 139 ARF-YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL 194
Query: 667 GNTKRIVGT 675
            NT   VGT
Sbjct: 195 SNT---VGT 200

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R  N + + A+K L  +     G+E + + E+ + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 66  RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     ++IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 32  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 92  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 179

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 22  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P      +L   +   +I
Sbjct: 82  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 142 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 15  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P  +   +L   +   +I
Sbjct: 75  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 16  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P  +   +L   +   +I
Sbjct: 76  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 136 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 13  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 72
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P  +   +L   +   +I
Sbjct: 73  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 133 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 9   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 69  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 119
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 120 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 12  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 71
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P      +L   +   +I
Sbjct: 72  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 132 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +   +E  +G G FG V K +    ++VA+K++ S+S +  + F  E+  ++++ H N+V
Sbjct: 9   KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 65
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLF--DP----TKKRLLGWQARIGIIEGIAQGLL 621
           ++ G C+      L++EY    SL   L   +P    T    + W  +       +QG+ 
Sbjct: 66  KLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVA 117
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNP-KISDFGLA 657
           YLH      +IHRDLK  N+LL       KI DFG A
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 15  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 74
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P  +   +L   +   +I
Sbjct: 75  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 135 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 7   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 67  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 117
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 118 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 16  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 75
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P  +   +L   +   +I
Sbjct: 76  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 136 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 9   VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P  +   +L   +   +I
Sbjct: 69  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 89  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 139
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 89  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 139
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 140 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 10/161 (6%)
Query: 499 SLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNE 554
           ++ S   A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E
Sbjct: 2   AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 555 MLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE 614
           + + + L+H N++R+ G   +     LILEY P   L     +  K      Q     I 
Sbjct: 62  VEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYIT 118
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
            +A  L Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 68  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 118
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 119 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 7   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 44  VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 103
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P  +   +L   +   +I
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 163
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 164 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 93  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 143
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 90  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 140
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 68  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 155

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 90  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 140
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 90  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 140
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 7   VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 66
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P  +   +L   +   +I
Sbjct: 67  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 126
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R
Sbjct: 127 QMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 14  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 74  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 124
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 125 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +   +E  +G G FG V K +    ++VA+K++ S+S +  + F  E+  ++++ H N+V
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIV 64
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLF--DP----TKKRLLGWQARIGIIEGIAQGLL 621
           ++ G C+      L++EY    SL   L   +P    T    + W  +       +QG+ 
Sbjct: 65  KLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC------SQGVA 116
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNP-KISDFGLA 657
           YLH      +IHRDLK  N+LL       KI DFG A
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 92  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 500 LASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEM 555
           L S   A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+
Sbjct: 3   LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 556 LLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
            + + L+H N++R+ G   +     LILEY P   L     +  K      Q     I  
Sbjct: 63  EIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITE 119
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           +A  L Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 93  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 143
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 144 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 92  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 92  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 35  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 95  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 145
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 146 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   +   L   +K      Q     I  +A  L 
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANALS 127
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEE--------VAVKRLSSQSGQ-GLEEFKNEMLLIAKL-QHRN 565
           LGEG FG V     +  ++        VAVK L   + +  L +  +EM ++  + +H+N
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQARIGI 612
           ++ +LG C + G   +I+ Y    +L  +L              +   +  + ++  +  
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 92  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 513 ECKLGEGGFGPVYKG--RLLNGE-EVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVR 568
           + +LG G FG V +G  R+   + +VA+K L   + +   EE   E  ++ +L +  +VR
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI------IEGIAQGLLY 622
           ++G C  Q E ++++  M           P  K L+G +  I +      +  ++ G+ Y
Sbjct: 401 LIGVC--QAEALMLVMEMAGGG-------PLHKFLVGKREEIPVSNVAELLHQVSMGMKY 451
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           L   +    +HR+L A NVLL      KISDFGL++  G D+
Sbjct: 452 LEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 92  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 5   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 65  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 152

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 92  PFFVK-LYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAE--------IV 142
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 143 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQ-GLE-EFKNEMLLIAKLQ 562
           AT  +    ++G G +G VYK R   +G  VA+K +   +G+ GL      E+ L+ +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 563 ---HRNLVRILGCCI-----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE 614
              H N+VR++  C       + +  L+ E++ ++ L  +L D      L  +    ++ 
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
              +GL +LH      I+HRDLK  N+L+      K++DFGLAR++
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 11  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   +   L   +K      Q     I  +A  L 
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANALS 127
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQ-GLE-EFKNEMLLIAKLQ 562
           AT  +    ++G G +G VYK R   +G  VA+K +   +G+ GL      E+ L+ +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 563 ---HRNLVRILGCCI-----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE 614
              H N+VR++  C       + +  L+ E++ ++ L  +L D      L  +    ++ 
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
              +GL +LH      I+HRDLK  N+L+      K++DFGLAR++
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 21/156 (13%)
Query: 515 KLGEGGFGPVYKGRLLNGEE-VAVKRLS-SQSGQGLEEFK-NEMLLIAKLQHRNLVRILG 571
           K+GEG +G V+K +     E VA+KR+      +G+      E+ L+ +L+H+N+VR+  
Sbjct: 9   KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 572 CCIEQGEKILILEYMPNKSLDVFL------FDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
                 +  L+ E+  ++ L  +        DP   +   +Q        + +GL + H 
Sbjct: 69  VLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQ--------LLKGLGFCH- 118
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            SR  ++HRDLK  N+L++R+   K+++FGLAR FG
Sbjct: 119 -SR-NVLHRDLKPQNLLINRNGELKLANFGLARAFG 152

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 10  ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 70  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 157

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQ-GLE-EFKNEMLLIAKLQ 562
           AT  +    ++G G +G VYK R   +G  VA+K +   +G+ GL      E+ L+ +L+
Sbjct: 2   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 563 ---HRNLVRILGCCI-----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE 614
              H N+VR++  C       + +  L+ E++ ++ L  +L D      L  +    ++ 
Sbjct: 62  AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKDLMR 119
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
              +GL +LH      I+HRDLK  N+L+      K++DFGLAR++
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 162

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +F     LG+G FG V K R  L+    A+K++   + + L    +E+ L+A L H+ +V
Sbjct: 7   DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQYVV 65
Query: 568 RILGCCIEQGEKI-------------LILEYMPNKSLDVFLFDPT--KKRLLGWQARIGI 612
           R     +E+   +             +  EY  N++L   +      ++R   W+    +
Sbjct: 66  RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR----L 121
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              I + L Y+H      IIHR+LK  N+ +D   N KI DFGLA+
Sbjct: 122 FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 6   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 10/152 (6%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKLQH 563
           E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L+H
Sbjct: 12  EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L Y 
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           H     R+IHRD+K  N+LL  +   KI+DFG
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG 157

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 10/152 (6%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKLQH 563
           E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L+H
Sbjct: 12  EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L Y 
Sbjct: 72  PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           H     R+IHRD+K  N+LL  +   KI+DFG
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG 157

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 16/184 (8%)
Query: 503 VAAATENFSMECKLGEGGFGPVYK------GRLLNGEEVAVKRLSSQSGQGLEEFKNEML 556
           + +  E++ +   +G G +G   K      G++L  +E+    ++    Q L    +E+ 
Sbjct: 1   MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML---VSEVN 57
Query: 557 LIAKLQHRNLVRILGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKR-LLGWQARIGII 613
           L+ +L+H N+VR     I++    L  ++EY     L   +   TK+R  L  +  + ++
Sbjct: 58  LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 614 EGIAQGLLYLHHYSR--FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
             +   L   H  S     ++HRDLK +NV LD   N K+ DFGLAR+   DE     K 
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--DFAKE 175
Query: 672 IVGT 675
            VGT
Sbjct: 176 FVGT 179

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 20/187 (10%)
Query: 498 FSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQ---GLEEFKN 553
           F   S A  ++ +  +  LG+G FG V   +  + G+E AVK +S +  +     E    
Sbjct: 16  FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 554 EMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP--TKKRLLGWQARIG 611
           E+ L+ +L H N+ ++     ++G   L+ E      L    FD   ++KR     A   
Sbjct: 76  EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDA-AR 130
Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGGDELQGN 668
           II  +  G+ Y H   + +I+HRDLK  N+LL+   +D N +I DFGL+  F   E    
Sbjct: 131 IIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKK 184
Query: 669 TKRIVGT 675
            K  +GT
Sbjct: 185 XKDKIGT 191

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 17/168 (10%)
Query: 505 AATENFSMECKLGEGGFGPVYKGR---LLNGE---EVAVKRLS-SQSGQGLEEFKNEMLL 557
            A E  +M  +LG+G FG VY+G    ++  E    VA+K ++ + S +   EF NE  +
Sbjct: 9   VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 68
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL--FDPTKKR--LLGWQARIGII 613
           + +    ++VR+LG   +    ++I+E M    L  +L    P  +   +L   +   +I
Sbjct: 69  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 614 E---GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +    IA G+ YL+     + +HRDL A N  +  D   KI DFG+ R
Sbjct: 129 QMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 505 AATENFSMECKLGEGGFGPVYKGRLLNGEEV----AVKRLSS----QSGQGLEEFKNEML 556
              ENF +   LG G +G V+  R ++G +     A+K L      Q  +  E  + E  
Sbjct: 51  VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 557 LIAKLQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
           ++  ++    +  L    +   K+ LIL+Y+    L  F     ++R    + +I + E 
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVGEI 168
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
           +    L L H  +  II+RD+K  N+LLD + +  ++DFGL++ F  DE +
Sbjct: 169 V----LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 3   ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 63  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI+DFG
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG 150

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 76/178 (42%), Gaps = 22/178 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F      R L    E A+K L  +       +     E  ++++L H
Sbjct: 30  EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 564 RNLVRILGCCIEQGEKILI-LEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIA 617
              V+ L    +  EK+   L Y  N  L  ++     FD T  R    +        I 
Sbjct: 90  PFFVK-LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAE--------IV 140
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 141 SALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 8   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 68  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI++FG
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG 155

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKL 561
           + ++F +   LG G FG V+  R   NG   A+K L  +     + +E   +E L+++ +
Sbjct: 4   SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
            H  ++R+ G   +  +  +I++Y+    L  F      +R     A+    E +   L 
Sbjct: 64  THPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAE-VCLALE 120
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           YLH      II+RDLK  N+LLD++ + KI+DFG A+
Sbjct: 121 YLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAK 154

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 531 NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKS 590
           N +++++K          ++FKNE+ +I  +++   +   G      E  +I EYM N S
Sbjct: 77  NNDKISIK-------SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS 129
Query: 591 L-----DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR 645
           +       F+ D      +  Q    II+ +     Y+H+     I HRD+K SN+L+D+
Sbjct: 130 ILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDK 187
Query: 646 DMNPKISDFGLARMFGGDELQG 667
           +   K+SDFG +      +++G
Sbjct: 188 NGRVKLSDFGESEYMVDKKIKG 209

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE 575
           +G+G FG VY GR      + +  +   +   L+ FK E++   + +H N+V  +G C+ 
Sbjct: 41  IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRD 635
                +I      ++L   + D   K +L       I + I +G+ YLH      I+H+D
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 636 LKASNVLLDRDMNPKISDFGLARMFG 661
           LK+ NV  D +    I+DFGL  + G
Sbjct: 156 LKSKNVFYD-NGKVVITDFGLFSISG 180

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 95/177 (53%), Gaps = 13/177 (7%)
Query: 502 SVAAATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLS-SQSGQGLEEFKNEMLLIA 559
           ++A   E F+   ++G+G FG V+KG     ++V A+K +   ++   +E+ + E+ +++
Sbjct: 17  NIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLS 76
Query: 560 KLQHRNLVRILGCCIEQGEKILILEYMPNKS-LDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           +     + +  G  ++  +  +I+EY+   S LD+    P  +  +       +++ I +
Sbjct: 77  QCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA-----TMLKEILK 131
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           GL YLH   +   IHRD+KA+NVLL    + K++DFG+A      +++ NT   VGT
Sbjct: 132 GLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGT 183

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 22/180 (12%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVK-----RLSS-QSGQGLEEFKNEMLLIAK 560
           +++ M  +LG G F  V K R    G+E A K     RLSS + G   EE + E+ ++ +
Sbjct: 12  DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           ++H N++ +      + + +LILE +    L  FL    +K  L        ++ I  G+
Sbjct: 72  IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQILDGV 128
Query: 621 LYLHHYSRFRIIHRDLKASNV-LLDRDM-NPKIS--DFGLA-RMFGGDELQGNTKRIVGT 675
            YLH     RI H DLK  N+ LLD+++ NP+I   DFG+A ++  G+E     K I GT
Sbjct: 129 HYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----KNIFGT 181

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
           A E+F +   LG+G FG VY  R    + + A+K L  +     G+E + + E+ + + L
Sbjct: 9   ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+ G   +     LILEY P   L     +  K      Q     I  +A  L 
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     R+IHRD+K  N+LL      KI++FG
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG 156

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 22/184 (11%)
Query: 504 AAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVK-----RLSS-QSGQGLEEFKNEML 556
           +   +++ M  +LG G F  V K R    G+E A K     RLSS + G   EE + E+ 
Sbjct: 1   SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++ +++H N++ +      + + +LILE +    L  FL    +K  L        ++ I
Sbjct: 61  ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQI 117
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNV-LLDRDM-NPKIS--DFGLA-RMFGGDELQGNTKR 671
             G+ YLH     RI H DLK  N+ LLD+++ NP+I   DFG+A ++  G+E     K 
Sbjct: 118 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----KN 170
Query: 672 IVGT 675
           I GT
Sbjct: 171 IFGT 174

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLN--GEEVAVKRLSSQSGQGL---EEFKNEMLLIAK 560
           A E+  +   LGEG FG VY+G   N  GE++ V   + +    L   E+F +E +++  
Sbjct: 6   AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           L H ++V+++G  IE+    +I+E  P   L  +L     K  L     +     I + +
Sbjct: 66  LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAM 122
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            YL        +HRD+   N+L+      K+ DFGL+R
Sbjct: 123 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR 157

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLN--GEEVAVKRLSSQSGQGL---EEFKNEMLLIAK 560
           A E+  +   LGEG FG VY+G   N  GE++ V   + +    L   E+F +E +++  
Sbjct: 22  AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           L H ++V+++G  IE+    +I+E  P   L  +L     K  L     +     I + +
Sbjct: 82  LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAM 138
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            YL        +HRD+   N+L+      K+ DFGL+R
Sbjct: 139 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR 173

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 95  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 182

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 515 KLGEGGFGPVYKGRLLNGE-EVAVKRLS-SQSGQGL------------EEFKNEMLLIAK 560
           KLG G +G V   +  NG  E A+K +  SQ  +G             EE  NE+ L+  
Sbjct: 43  KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           L H N++++     ++    L+ E+     L   + +  K           I++ I  G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECDAANIMKQILSGI 159
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRD---MNPKISDFGLARMFGGD 663
            YLH ++   I+HRD+K  N+LL+     +N KI DFGL+  F  D
Sbjct: 160 CYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLN--GEEVAVKRLSSQSGQGL---EEFKNEMLLIAK 560
           A E+  +   LGEG FG VY+G   N  GE++ V   + +    L   E+F +E +++  
Sbjct: 10  AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           L H ++V+++G  IE+    +I+E  P   L  +L     K  L     +     I + +
Sbjct: 70  LDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAM 126
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            YL        +HRD+   N+L+      K+ DFGL+R
Sbjct: 127 AYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR 161

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 22/184 (11%)
Query: 504 AAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVK-----RL-SSQSGQGLEEFKNEML 556
           +   +++ M  +LG G F  V K R    G+E A K     RL SS+ G   EE + E+ 
Sbjct: 22  SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++ +++H N++ +      + + +LILE +    L  FL    +K  L        ++ I
Sbjct: 82  ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTEDEATQFLKQI 138
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNV-LLDRDM-NPKIS--DFGLA-RMFGGDELQGNTKR 671
             G+ YLH     RI H DLK  N+ LLD+++ NP+I   DFG+A ++  G+E     K 
Sbjct: 139 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF----KN 191
Query: 672 IVGT 675
           I GT
Sbjct: 192 IFGT 195

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFK-NEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 95  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 182

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V     + +G ++AVK+LS   QS    +    E+ L+  ++H 
Sbjct: 51  ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 565 NLVRIL-----GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+  +    K + L       +I  I +G
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDHVQFLIYQILRG 166
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 167 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 210

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 96  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 183

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 37  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 97  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 150
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 151 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 184

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 28  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 88  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 141
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 142 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 175

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 95  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 89  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 176

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 95  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 96  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 183

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 89  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 176

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 503 VAAATENFSMECKLGEGGFGPVYK------GRLLNGEEVAVKRLSSQSGQGLEEFKNEML 556
           + +  E++ +   +G G +G   K      G++L  +E+    ++    Q L    +E+ 
Sbjct: 1   MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML---VSEVN 57
Query: 557 LIAKLQHRNLVRILGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKR-LLGWQARIGII 613
           L+ +L+H N+VR     I++    L  ++EY     L   +   TK+R  L  +  + ++
Sbjct: 58  LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 614 EGIAQGLLYLHHYSR--FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
             +   L   H  S     ++HRDLK +NV LD   N K+ DFGLAR+   D      K 
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKT 175
Query: 672 IVGT 675
            VGT
Sbjct: 176 FVGT 179

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRL--SSQSGQGLE-EFKNEMLLIAKLQH 563
           ++F +   LG+G FG VY  R       VA+K L  S    +G+E + + E+ + A L H
Sbjct: 23  DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+     ++    LILEY P   L   L    K      Q    I+E +A  L+Y 
Sbjct: 83  PNILRLYNYFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELADALMYC 139
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           H     ++IHRD+K  N+LL      KI+DFG
Sbjct: 140 HGK---KVIHRDIKPENLLLGLKGELKIADFG 168

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 516 LGEGGFGPV---YKGRLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           +G G +G V   Y  RL   ++VAVK+LS   QS         E+ L+  L+H N++ +L
Sbjct: 36  VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 571 -----GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
                   IE   ++    Y+    +   L +  K + L  +    ++  + +GL Y+H 
Sbjct: 94  DVFTPATSIEDFSEV----YLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
                IIHRDLK SNV ++ D   +I DFGLAR    +E+ G
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLARQ-ADEEMTG 187

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 503 VAAATENFSMECKLGEGGFGPVYK------GRLLNGEEVAVKRLSSQSGQGLEEFKNEML 556
           + +  E++ +   +G G +G   K      G++L  +E+    ++    Q L    +E+ 
Sbjct: 1   MPSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQML---VSEVN 57
Query: 557 LIAKLQHRNLVRILGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKR-LLGWQARIGII 613
           L+ +L+H N+VR     I++    L  ++EY     L   +   TK+R  L  +  + ++
Sbjct: 58  LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 614 EGIAQGLLYLHHYSR--FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
             +   L   H  S     ++HRDLK +NV LD   N K+ DFGLAR+   D      K 
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TSFAKA 175
Query: 672 IVGT 675
            VGT
Sbjct: 176 FVGT 179

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      +N   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 91  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 178

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      +N   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 91  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDH 178

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 533 EEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKS- 590
           E+VA+KR++ +  Q  ++E   E+  +++  H N+V      + + E  L+++ +   S 
Sbjct: 41  EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 591 LDVFLFDPTKKR----LLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD 646
           LD+      K      +L       I+  + +GL YLH   +   IHRD+KA N+LL  D
Sbjct: 101 LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 157
Query: 647 MNPKISDFGLARMF--GGDELQGNTKR-IVGT 675
            + +I+DFG++     GGD  +   ++  VGT
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      +N   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 91  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 178

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSS----QSGQGLEEFKNEM----LLIAKLQHRNLV 567
           LG G FG V +      ++ A  R  +    + G    E +  M    +LI    H N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 568 RILGCCIEQGEKIL-ILEYMPNKSLDVFL------FDPTK---KRLLGWQARIGIIEGIA 617
            +LG C + G  ++ I+E+    +L  +L      F P K   K  L  +  I     +A
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 95  RAPTIEQMKDVYIVQDL----METDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 533 EEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKS- 590
           E+VA+KR++ +  Q  ++E   E+  +++  H N+V      + + E  L+++ +   S 
Sbjct: 36  EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 591 LDVFLFDPTKKR----LLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD 646
           LD+      K      +L       I+  + +GL YLH   +   IHRD+KA N+LL  D
Sbjct: 96  LDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 152
Query: 647 MNPKISDFGLARMF--GGDELQGNTKR-IVGT 675
            + +I+DFG++     GGD  +   ++  VGT
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      +N   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 91  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 178

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  H ++V+++
Sbjct: 46  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G  I +    +I+E      L  FL    +K  L   + I     ++  L YL      R
Sbjct: 106 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +HRD+ A NVL+  +   K+ DFGL+R
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSR 187

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      LN   VA++++S    Q   +    E+ ++ + +H N++     I
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 95  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 13/171 (7%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLS-SQSGQGLEEFKNEMLLIAKLQHRN 565
           E F+   K+G+G FG V+KG     ++V A+K +   ++   +E+ + E+ ++++     
Sbjct: 7   ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 566 LVRILGCCIEQGEKILILEYMPNKS-LDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           + +  G  ++  +  +I+EY+   S LD+    P  +  +       I+  I +GL YLH
Sbjct: 67  VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLH 121
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              +   IHRD+KA+NVLL      K++DFG+A      +++ NT   VGT
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGT 167

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS-- 132
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKXQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG 181

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  H ++V+++
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G  I +    +I+E      L  FL    +K  L   + I     ++  L YL      R
Sbjct: 78  GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +HRD+ A NVL+  +   K+ DFGL+R
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR 159

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  H ++V+++
Sbjct: 23  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G  I +    +I+E      L  FL    +K  L   + I     ++  L YL      R
Sbjct: 83  GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +HRD+ A NVL+  +   K+ DFGL+R
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSR 164

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 17  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 77  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH--- 130
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 179

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      +N   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 93  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 180

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS-- 132
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  H ++V+++
Sbjct: 21  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G  I +    +I+E      L  FL    +K  L   + I     ++  L YL      R
Sbjct: 81  GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +HRD+ A NVL+  +   K+ DFGL+R
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSR 162

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSS----QSGQGLEEFKNEM----LLIAKLQHRNLV 567
           LG G FG V +      ++ A  R  +    + G    E +  M    +LI    H N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 568 RILGCCIEQGEKIL-ILEYMPNKSLDVFL------FDPTK---KRLLGWQARIGIIEGIA 617
            +LG C + G  ++ I+E+    +L  +L      F P K   K  L  +  I     +A
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 17  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 77  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH--- 130
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 179

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 516 LGEGGFGPV---YKGRLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           +G G +G V   Y  RL   ++VAVK+LS   QS         E+ L+  L+H N++ +L
Sbjct: 28  VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 571 -----GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
                   IE   ++ ++  +    L+    +  K + L  +    ++  + +GL Y+H 
Sbjct: 86  DVFTPATSIEDFSEVYLVTTLMGADLN----NIVKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
                IIHRDLK SNV ++ D   +I DFGLAR    +E+ G
Sbjct: 142 AG---IIHRDLKPSNVAVNEDCELRILDFGLARQ-ADEEMTG 179

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  H ++V+++
Sbjct: 18  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G  I +    +I+E      L  FL    +K  L   + I     ++  L YL      R
Sbjct: 78  GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +HRD+ A NVL+  +   K+ DFGL+R
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR 159

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  H ++V+++
Sbjct: 20  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G  I +    +I+E      L  FL    +K  L   + I     ++  L YL      R
Sbjct: 80  GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +HRD+ A NVL+  +   K+ DFGL+R
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSR 161

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  H ++V+++
Sbjct: 15  IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G  I +    +I+E      L  FL    +K  L   + I     ++  L YL      R
Sbjct: 75  GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +HRD+ A NVL+  +   K+ DFGL+R
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSR 156

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      +N   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 39  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 99  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 152
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 153 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 186

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      +N   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 91  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 144
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 178

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 13/171 (7%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLS-SQSGQGLEEFKNEMLLIAKLQHRN 565
           E F+   K+G+G FG V+KG     ++V A+K +   ++   +E+ + E+ ++++     
Sbjct: 27  ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 566 LVRILGCCIEQGEKILILEYMPNKS-LDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           + +  G  ++  +  +I+EY+   S LD+    P  +  +       I+  I +GL YLH
Sbjct: 87  VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLH 141
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              +   IHRD+KA+NVLL      K++DFG+A      +++ NT   VGT
Sbjct: 142 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGT 187

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 514 CKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
            K+GEG  G V    + + G+ VAVK++  +  Q  E   NE++++   QH N+V +   
Sbjct: 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
            +   E  +++E++   +L   +   T  R+   Q    +   + Q L  LH      +I
Sbjct: 217 YLVGDELWVVMEFLEGGALTDIV---THTRMNEEQI-AAVCLAVLQALSVLHAQG---VI 269
Query: 633 HRDLKASNVLLDRDMNPKISDFGL 656
           HRD+K+ ++LL  D   K+SDFG 
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGF 293

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 514 CKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
            K+GEG  G V    + + G+ VAVK++  +  Q  E   NE++++   QH N+V +   
Sbjct: 26  IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
            +   E  +++E++   +L     D      +  +    +   + Q L  LH      +I
Sbjct: 86  YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 138
Query: 633 HRDLKASNVLLDRDMNPKISDFG 655
           HRD+K+ ++LL  D   K+SDFG
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFG 161

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 32  ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 92  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 147
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 148 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 191

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 78  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 133
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 177

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGF   Y+   ++ +EV   ++  +S        E+   E+ +   L + ++V   G
Sbjct: 34  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              +     ++LE    +SL        +K +   +AR  + + I QG+ YLH+    R+
Sbjct: 94  FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 147
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLA 657
           IHRDLK  N+ L+ DM+ KI DFGLA
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLA 173

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 514 CKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
            K+GEG  G V    + + G+ VAVK++  +  Q  E   NE++++   QH N+V +   
Sbjct: 35  IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 94
Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
            +   E  +++E++   +L     D      +  +    +   + Q L  LH      +I
Sbjct: 95  YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 147
Query: 633 HRDLKASNVLLDRDMNPKISDFG 655
           HRD+K+ ++LL  D   K+SDFG
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFG 170

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      +N   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 111 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 165 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 198

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 514 CKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
            K+GEG  G V    + + G+ VAVK++  +  Q  E   NE++++   QH N+V +   
Sbjct: 30  IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
            +   E  +++E++   +L     D      +  +    +   + Q L  LH      +I
Sbjct: 90  YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 142
Query: 633 HRDLKASNVLLDRDMNPKISDFG 655
           HRD+K+ ++LL  D   K+SDFG
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFG 165

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 514 CKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
            K+GEG  G V    + + G+ VAVK++  +  Q  E   NE++++   QH N+V +   
Sbjct: 37  IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 96
Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
            +   E  +++E++   +L     D      +  +    +   + Q L  LH      +I
Sbjct: 97  YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VI 149
Query: 633 HRDLKASNVLLDRDMNPKISDFG 655
           HRD+K+ ++LL  D   K+SDFG
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFG 172

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 78  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 133
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG 177

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 510 FSMECKLGEGGFGPVY-KGRLLNGEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLV 567
           F  + KLG G FG V+      +G E  +K ++    Q  +E+ + E+ ++  L H N++
Sbjct: 24  FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR-IGIIEGIAQGLL----- 621
           +I     +     +++E      L         +R++  QAR   + EG    L+     
Sbjct: 84  KIFEVFEDYHNMYIVMETCEGGEL--------LERIVSAQARGKALSEGYVAELMKQMMN 135
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNP----KISDFGLARMFGGDELQGNT 669
            L ++    ++H+DLK  N+L  +D +P    KI DFGLA +F  DE   N 
Sbjct: 136 ALAYFHSQHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTNA 186

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG 181

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGF   Y+   ++ +EV   ++  +S        E+   E+ +   L + ++V   G
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              +     ++LE    +SL        +K +   +AR  + + I QG+ YLH+    R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLA 657
           IHRDLK  N+ L+ DM+ KI DFGLA
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA 189

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAV-----KRLSSQSGQGLEEFKNEMLLIAK 560
           TE + +  +LG+G F  V +  ++L G+E A      K+LS++  Q LE    E  +   
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE---REARICRL 66
Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           L+H N+VR+     E+G   LI + +    L     D   +           I+ I + +
Sbjct: 67  LKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAV 123
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMN---PKISDFGLARMFGGDE 664
           L+ H   +  ++HR+LK  N+LL   +     K++DFGLA    G++
Sbjct: 124 LHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 512 MECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           +EC +G+G +G V++G L +GE VAVK  SS+  Q     + E+     L+H N++  + 
Sbjct: 13  VEC-VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIA 69
Query: 572 CCI----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH--- 624
             +       +  LI  Y  + SL    +D  +++ L     + +    A GL +LH   
Sbjct: 70  SDMTSRNSSTQLWLITHYHEHGSL----YDFLQRQTLEPHLALRLAVSAACGLAHLHVEI 125
Query: 625 --HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF--GGDELQ-GNTKRIVGT 675
                +  I HRD K+ NVL+  ++   I+D GLA M   G D L  GN  R VGT
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPR-VGT 180

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGF   Y+   ++ +EV   ++  +S        E+   E+ +   L + ++V   G
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              +     ++LE    +SL        +K +   +AR  + + I QG+ YLH+    R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLA 657
           IHRDLK  N+ L+ DM+ KI DFGLA
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA 189

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  H ++V+++
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G  I +    +I+E      L  FL    +K  L   + I     ++  L YL      R
Sbjct: 78  GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +HRD+ A NVL+  +   K+ DFGL+R
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR 159

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS-- 132
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGF   Y+   ++ +EV   ++  +S        E+   E+ +   L + ++V   G
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              +     ++LE    +SL        +K +   +AR  + + I QG+ YLH+    R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSL--LELHKRRKAVTEPEARYFMRQTI-QGVQYLHNN---RV 163
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLA 657
           IHRDLK  N+ L+ DM+ KI DFGLA
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLA 189

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKXQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG 181

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 516 LGEGGFGPV---YKGRLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           +G G +G V   Y  RL   ++VAVK+LS   QS         E+ L+  L+H N++ +L
Sbjct: 36  VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 571 -----GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
                   IE   ++    Y+    +   L +  K + L  +    ++  + +GL Y+H 
Sbjct: 94  DVFTPATSIEDFSEV----YLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
                IIHRDLK SNV ++ D   +I DFGLAR    +E+ G
Sbjct: 150 AG---IIHRDLKPSNVAVNEDSELRILDFGLARQ-ADEEMTG 187

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLHS-- 132
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 133 -LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSS----QSGQGLEEFKNEM----LLIAKLQHRNLV 567
           LG G FG V +      ++ A  R  +    + G    E +  M    +LI    H N+V
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 568 RILGCCIEQGEKIL-ILEYMPNKSLDVFL------FDPTK-----KRLLGWQARIGIIEG 615
            +LG C + G  ++ I+E+    +L  +L      F P K     K  L  +  I     
Sbjct: 97  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 88  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 143
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 187

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 27  ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 87  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 142
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG 186

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 42  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 157
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 201

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 42  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 157
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXG 201

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 41  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 156
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 157 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 200

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      +N   VA+K++S    Q   +    E+ ++   +H N++     I
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 93  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 180

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 89  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 144
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG 188

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILILE +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 30/158 (18%)
Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
           +G G +G V       +GE+VA+K+LS   QS    +    E+LL+  +QH N++ +L  
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 573 CIEQGEKILILEYMPNKSL----DVFLFDPTKK----RLLGW---QARIG-IIEGIAQGL 620
                       + P  SL    D +L  P  +    +++G    + +I  ++  + +GL
Sbjct: 92  ------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGL 139
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            Y+H      ++HRDLK  N+ ++ D   KI DFGLAR
Sbjct: 140 KYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 89  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 144
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG 188

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 30/158 (18%)
Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
           +G G +G V       +GE+VA+K+LS   QS    +    E+LL+  +QH N++ +L  
Sbjct: 50  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 573 CIEQGEKILILEYMPNKSL----DVFLFDPTKK----RLLGWQ---ARIG-IIEGIAQGL 620
                       + P  SL    D +L  P  +    +++G +    +I  ++  + +GL
Sbjct: 110 ------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGL 157
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            Y+H      ++HRDLK  N+ ++ D   KI DFGLAR
Sbjct: 158 KYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      +N   VA+K++S    Q   +    E+ ++   +H N++     I
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + I++ +    ++  L+   K + L        +  I +GL Y+H  +  
Sbjct: 93  RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 146
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 147 -VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDH 180

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 89  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 144
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG 188

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 27  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 87  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 142
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG 186

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  H ++V+++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G  I +    +I+E      L  FL    +K  L   + I     ++  L YL      R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +HRD+ A NVL+  +   K+ DFGL+R
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSR 539

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 514 CKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
            K+GEG  G V    + + G+ VAVK++  +  Q  E   NE++++   QH N+V +   
Sbjct: 80  IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
            +   E  +++E++   +L   +   T  R+   Q    +   + Q L  LH      +I
Sbjct: 140 YLVGDELWVVMEFLEGGALTDIV---THTRMNEEQI-AAVCLAVLQALSVLHAQG---VI 192
Query: 633 HRDLKASNVLLDRDMNPKISDFGL 656
           HRD+K+ ++LL  D   K+SDFG 
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGF 216

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  H ++V+++
Sbjct: 18  IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G  I +    +I+E      L  FL    +K  L   + I     ++  L YL      R
Sbjct: 78  GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +HRD+ A NVL+      K+ DFGL+R
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSR 159

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLV----RI 569
           +GEG +G V      +N   VA+K++S    Q   +    E+ ++ + +H N++     I
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
               IEQ + + ++ ++    +   L+   K + L        +  I +GL Y+H  +  
Sbjct: 111 RAPTIEQMKDVYLVTHL----MGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 164
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 165 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 198

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K   L       +I  I +G
Sbjct: 78  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCAKLTDDHVQFLIYQILRG 133
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 177

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 13/175 (7%)
Query: 504 AAATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLS-SQSGQGLEEFKNEMLLIAKL 561
           A   E F+   K+G+G FG V+KG     ++V A+K +   ++   +E+ + E+ ++++ 
Sbjct: 18  ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKS-LDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
               + +  G  ++  +  +I+EY+   S LD+    P  +  +       I+  I +GL
Sbjct: 78  DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGL 132
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            YLH   +   IHRD+KA+NVLL      K++DFG+A      +++ N    VGT
Sbjct: 133 DYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGT 182

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGF   ++    + +EV   ++  +S        E+   E+ +   L H+++V   G
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              +     ++LE    +SL        +K L   +AR   +  I  G  YLH   R R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 160
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
           IHRDLK  N+ L+ D+  KI DFGLA      E  G  K+++
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVL 199

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGF   ++    + +EV   ++  +S        E+   E+ +   L H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              +     ++LE    +SL        +K L   +AR   +  I  G  YLH   R R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 162
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
           IHRDLK  N+ L+ D+  KI DFGLA      E  G  K+++
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVL 201

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 33  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 93  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 148
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 149 LKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG 192

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 79/194 (40%), Gaps = 34/194 (17%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQSGQG-LEEFKNEMLLIAK 560
           EN      LG G FG V               +VAVK L  ++     E   +E+ ++ +
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 561 L-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKK------------------ 601
           L  H N+V +LG C   G   LI EY     L  +L    +K                  
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 602 --RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
              +L ++  +     +A+G+ +L   S    +HRDL A NVL+      KI DFGLAR 
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 660 FGGDE---LQGNTK 670
              D    ++GN +
Sbjct: 222 IMSDSNYVVRGNAR 235

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 493 SWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFK 552
           S LPL    ++A       ++  +G+G FG V++G+   GEEVAVK  SS+  +    F+
Sbjct: 17  SGLPLLVQRTIA---RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FR 70
Query: 553 N-EMLLIAKLQHRNLVRILGCCIEQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQ 607
             E+     L+H N++  +    +      +  L+ +Y  + SL    FD   +  +  +
Sbjct: 71  EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVE 126
Query: 608 ARIGIIEGIAQGLLYLHH-----YSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             I +    A GL +LH        +  I HRDLK+ N+L+ ++    I+D GLA
Sbjct: 127 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 20/175 (11%)
Query: 493 SWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFK 552
           S LPL    ++A       ++  +G+G FG V++G+   GEEVAVK  SS+  +    F+
Sbjct: 30  SGLPLLVQRTIA---RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FR 83
Query: 553 N-EMLLIAKLQHRNLVRILGCCIEQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQ 607
             E+     L+H N++  +    +      +  L+ +Y  + SL    FD   +  +  +
Sbjct: 84  EAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVE 139
Query: 608 ARIGIIEGIAQGLLYLHH-----YSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             I +    A GL +LH        +  I HRDLK+ N+L+ ++    I+D GLA
Sbjct: 140 GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 78  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 133
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 134 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 177

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGF   ++    + +EV   ++  +S        E+   E+ +   L H+++V   G
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              +     ++LE    +SL        +K L   +AR   +  I  G  YLH   R R+
Sbjct: 89  FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 142
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLA 657
           IHRDLK  N+ L+ D+  KI DFGLA
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLA 168

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 19  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 79  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 134
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 135 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 178

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 20/179 (11%)
Query: 495 LPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRL-SSQSGQGLEEFKN 553
           LPL    ++A   +   M  ++G+G +G V+ G+   GE+VAVK   +++      E   
Sbjct: 27  LPLLVQRTIA---KQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE--T 80
Query: 554 EMLLIAKLQHRNLVRILGCCIEQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQAR 609
           E+     ++H N++  +   I+      +  LI +Y  N SL    +D  K   L  ++ 
Sbjct: 81  EIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSL----YDYLKSTTLDAKSM 136
Query: 610 IGIIEGIAQGLLYLHH-----YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           + +      GL +LH        +  I HRDLK+ N+L+ ++    I+D GLA  F  D
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISD 195

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 45  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 160
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 161 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXG 204

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 34  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 94  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 149
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 150 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 193

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 19  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 79  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 134
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 135 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 178

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 84  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 139
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 183

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 20  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 80  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 135
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 136 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 179

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGF   ++    + +EV   ++  +S        E+   E+ +   L H+++V   G
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              +     ++LE    +SL        +K L   +AR   +  I  G  YLH   R R+
Sbjct: 83  FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 136
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
           IHRDLK  N+ L+ D+  KI DFGLA      E  G  K+++
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKV---EYDGERKKVL 175

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSS----QSGQGLEEFKNEM----LLIAKLQHRNLV 567
           LG G FG V +      ++ A  R  +    + G    E +  M    +LI    H N+V
Sbjct: 36  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 568 RILGCCIEQGEKIL-ILEYMPNKSLDVFL------FDPTK------KRLLGWQARIGIIE 614
            +LG C + G  ++ I+E+    +L  +L      F P K      K  L  +  I    
Sbjct: 96  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 89  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 144
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 145 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 188

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 27  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 87  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 142
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 186

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 84  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 139
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 183

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 21  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 81  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 136
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 137 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 180

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 27  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 87  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 142
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 143 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 186

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 17/160 (10%)
Query: 514 CK-LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILG 571
           CK +G G FG V++ +L+  +EVA+K++        + FKN  L I ++ +H N+V +  
Sbjct: 45  CKVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKA 99
Query: 572 CCIEQGEKI------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
                G+K       L+LEY+P     V+       +L      + I   + Q L  L +
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPET---VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 626 YSRFRIIHRDLKASNVLLDRDMNP-KISDFGLARMFGGDE 664
                I HRD+K  N+LLD      K+ DFG A++    E
Sbjct: 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGF   ++    + +EV   ++  +S        E+   E+ +   L H+++V   G
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              +     ++LE    +SL        +K L   +AR   +  I  G  YLH   R R+
Sbjct: 85  FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 138
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLA 657
           IHRDLK  N+ L+ D+  KI DFGLA
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA 164

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGF   ++    + +EV   ++  +S        E+   E+ +   L H+++V   G
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
              +     ++LE    +SL        +K L   +AR   +  I  G  YLH   R R+
Sbjct: 85  FFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEARY-YLRQIVLGCQYLH---RNRV 138
Query: 632 IHRDLKASNVLLDRDMNPKISDFGLA 657
           IHRDLK  N+ L+ D+  KI DFGLA
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLA 164

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 84  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 139
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 183

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 88  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 143
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEMTG 187

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 84  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 139
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 140 LKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEMTG 183

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
             ++F +   LG+G FG VY  R    + + A+K L  S    +G+E + + E+ + + L
Sbjct: 12  TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+     ++    L+LE+ P   L   L    K      Q     +E +A  L 
Sbjct: 72  RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALH 128
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     ++IHRD+K  N+L+      KI+DFG
Sbjct: 129 YCHER---KVIHRDIKPENLLMGYKGELKIADFG 159

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 26/173 (15%)
Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRL-------SSQSGQGLEEFKNEMLLIAKLQHRNL 566
           KLG G +G V   +  L G E A+K +       +S SG  L    +E+ ++ +L H N+
Sbjct: 11  KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL----DEVAVLKQLDHPNI 66
Query: 567 VRILGCCIEQGEKILILE-YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +++     ++    L++E Y   +  D  +    +++     A + I++ +  G  YLH 
Sbjct: 67  MKLYEFFEDKRNYYLVMEVYRGGELFDEIIL---RQKFSEVDAAV-IMKQVLSGTTYLHK 122
Query: 626 YSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           ++   I+HRDLK  N+LL+   RD   KI DFGL+  F   E+ G  K  +GT
Sbjct: 123 HN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGT 169

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 88  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 143
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 187

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 34  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 94  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 149
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 150 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 193

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 181

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 34  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 94  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 149
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 150 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 193

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 88  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 143
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 144 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 187

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 10/154 (6%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRL--SSQSGQGLE-EFKNEMLLIAKL 561
             ++F +   LG+G FG VY  R    + + A+K L  S    +G+E + + E+ + + L
Sbjct: 13  TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 72
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N++R+     ++    L+LE+ P   L   L    K      Q     +E +A  L 
Sbjct: 73  RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL---QKHGRFDEQRSATFMEELADALH 129
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
           Y H     ++IHRD+K  N+L+      KI+DFG
Sbjct: 130 YCHER---KVIHRDIKPENLLMGYKGELKIADFG 160

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 514 CKLGEGGFGPV-YKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
            K+GEG  G V        G++VAVK++  +  Q  E   NE++++    H N+V +   
Sbjct: 51  IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
            +   E  +++E++   +L     D      +  +    +   + + L YLH+     +I
Sbjct: 111 YLVGDELWVVMEFLEGGALT----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VI 163
Query: 633 HRDLKASNVLLDRDMNPKISDFGL 656
           HRD+K+ ++LL  D   K+SDFG 
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGF 187

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 57/206 (27%)
Query: 510 FSMECK----LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHR 564
           F M+ K    +G GGFG V+K +  ++G+   ++R+   +    E+ + E+  +AKL H 
Sbjct: 10  FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHV 65
Query: 565 NLVRILGCCIEQGEKILILEYMP---NKSLDVFLFDPT---------------------K 600
           N+V   GC    G      +Y P   + SL+   +DP                      K
Sbjct: 66  NIVHYNGCW--DG-----FDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 601 KRLLGW-QARIG----------IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP 649
             L  W + R G          + E I +G+ Y+H     ++IHRDLK SN+ L      
Sbjct: 119 GTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQV 175
Query: 650 KISDFGLARMFGGDELQGNTKRIVGT 675
           KI DFGL      D   G   R  GT
Sbjct: 176 KIGDFGLVTSLKND---GKRTRSKGT 198

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 512 MECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           +EC +G+G +G V++G    GE VAVK  SS+  +     + E+     L+H N++  + 
Sbjct: 42  LEC-VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIA 98
Query: 572 CCI----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH--- 624
             +       +  LI  Y    SL    +D  +   L   + + I+  IA GL +LH   
Sbjct: 99  SDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 625 --HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ---GNTKRI 672
                +  I HRDLK+ N+L+ ++    I+D GLA M      Q   GN  R+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 207

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 19/169 (11%)
Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEF-----KNEMLLIA 559
           AT  +    ++G G +G VYK R   +G  VA+K +   +G G           E+ L+ 
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 560 KLQ---HRNLVRILGCCI-----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG 611
           +L+   H N+VR++  C       + +  L+ E++ ++ L  +L D      L  +    
Sbjct: 67  RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYL-DKAPPPGLPAETIKD 124
Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           ++    +GL +LH      I+HRDLK  N+L+      K++DFGLAR++
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY 170

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 89/171 (52%), Gaps = 13/171 (7%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLS-SQSGQGLEEFKNEMLLIAKLQHRN 565
           E F+   K+G+G FG V+KG     ++V A+K +   ++   +E+ + E+ ++++     
Sbjct: 7   ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 566 LVRILGCCIEQGEKILILEYMPNKS-LDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           + +  G  ++  +  +I+EY+   S LD+    P  +  +       I+  I +GL YLH
Sbjct: 67  VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-----TILREILKGLDYLH 121
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              +   IHRD+KA+NVLL      K++DFG+A      +++ N    VGT
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGT 167

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 516 LGEGGFGPVYKGRLLNGE----EVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRIL 570
           +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  H ++V+++
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
           G  I +    +I+E      L  FL    +K  L   + I     ++  L YL      R
Sbjct: 458 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +HRD+ A NVL+      K+ DFGL+R
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSR 539

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 33  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 93  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 148
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 149 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 192

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 42/194 (21%)
Query: 508 ENFSMECK----LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
           + F M+ K    +G GGFG V+K +  ++G+   +KR+   +    E+ + E+  +AKL 
Sbjct: 7   KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLD 62
Query: 563 HRNLVRILGC---------------------CIEQGEKILILEYMPNKSLDVFLFDPTKK 601
           H N+V   GC                     C+      + +E+    +L+ ++     +
Sbjct: 63  HVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCL-----FIQMEFCDKGTLEQWIEKRRGE 117
Query: 602 RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           +L    A + + E I +G+ Y+H     ++I+RDLK SN+ L      KI DFGL     
Sbjct: 118 KLDKVLA-LELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK 173
Query: 662 GDELQGNTKRIVGT 675
            D   G   R  GT
Sbjct: 174 ND---GKRXRSKGT 184

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 42  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 157
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 158 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 201

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 512 MECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           +EC +G+G +G V++G    GE VAVK  SS+  +     + E+     L+H N++  + 
Sbjct: 13  LEC-VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIA 69
Query: 572 CCI----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH--- 624
             +       +  LI  Y    SL    +D  +   L   + + I+  IA GL +LH   
Sbjct: 70  SDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 625 --HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ---GNTKRIVGT 675
                +  I HRDLK+ N+L+ ++    I+D GLA M      Q   GN  R VGT
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGT 180

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 41  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 156
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 157 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 200

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 512 MECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           +EC +G+G +G V++G    GE VAVK  SS+  +     + E+     L+H N++  + 
Sbjct: 13  LEC-VGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFR-ETELYNTVMLRHENILGFIA 69
Query: 572 CCI----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH--- 624
             +       +  LI  Y    SL    +D  +   L   + + I+  IA GL +LH   
Sbjct: 70  SDMTSRHSSTQLWLITHYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 625 --HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ---GNTKRIVGT 675
                +  I HRDLK+ N+L+ ++    I+D GLA M      Q   GN  R VGT
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR-VGT 180

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSS----QSGQGLEEFKNEM----LLIAKLQHRNLV 567
           LG G FG V +      ++ A  R  +    + G    E +  M    +LI    H N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 568 RILGCCIEQGEKIL-ILEYMPNKSLDVFL------FDPTK-------KRLLGWQARIGII 613
            +LG C + G  ++ I+E+    +L  +L      F P K       K  L  +  I   
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 87/173 (50%), Gaps = 26/173 (15%)
Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRL-------SSQSGQGLEEFKNEMLLIAKLQHRNL 566
           KLG G +G V   +  L G E A+K +       +S SG  L    +E+ ++ +L H N+
Sbjct: 28  KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL----DEVAVLKQLDHPNI 83
Query: 567 VRILGCCIEQGEKILILE-YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +++     ++    L++E Y   +  D  +    +++     A + I++ +  G  YLH 
Sbjct: 84  MKLYEFFEDKRNYYLVMEVYRGGELFDEIIL---RQKFSEVDAAV-IMKQVLSGTTYLHK 139
Query: 626 YSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           ++   I+HRDLK  N+LL+   RD   KI DFGL+  F   E+ G  K  +GT
Sbjct: 140 HN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGKMKERLGT 186

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 516 LGEGGFGPVYKG------RLLNGEEVAVKRLSSQSGQGLEEFKNEM----LLIAKLQHRN 565
           LG G FG V +       +      VAVK L  + G    E +  M    +LI    H N
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 566 LVRILGCCIEQGEKILIL-EYMPNKSLDVFL------FDPTK-------KRLLGWQARIG 611
           +V +LG C + G  ++++ E+    +L  +L      F P K       K  L  +  I 
Sbjct: 84  VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
               +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSS----QSGQGLEEFKNEM----LLIAKLQHRNLV 567
           LG G FG V +      ++ A  R  +    + G    E +  M    +LI    H N+V
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 568 RILGCCIEQGEKIL-ILEYMPNKSLDVFL------FDPTK-------KRLLGWQARIGII 613
            +LG C + G  ++ I+E+    +L  +L      F P K       K  L  +  I   
Sbjct: 97  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSS----QSGQGLEEFKNEM----LLIAKLQHRNLV 567
           LG G FG V +      ++ A  R  +    + G    E +  M    +LI    H N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 568 RILGCCIEQGEKIL-ILEYMPNKSLDVFL------FDPTK-------KRLLGWQARIGII 613
            +LG C + G  ++ I+E+    +L  +L      F P K       K  L  +  I   
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQH 563
           T+ + +   +G+G F  V +  +L  G E A K ++++  S +  ++ + E  +   L+H
Sbjct: 3   TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N+VR+     E+G   L+ + +    L     D   +           I+ I + +L+ 
Sbjct: 63  SNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 624 HHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGGDE 664
           H   +  ++HRDLK  N+LL    +    K++DFGLA    GD+
Sbjct: 120 H---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ 160

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 516 LGEGGFGPVYKG------RLLNGEEVAVKRLSSQSGQGLEEFKNEM----LLIAKLQHRN 565
           LG G FG V +       +      VAVK L  + G    E +  M    +LI    H N
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 92
Query: 566 LVRILGCCIEQGEKIL-ILEYMPNKSLDVFL------FDPTK-------KRLLGWQARIG 611
           +V +LG C + G  ++ I+E+    +L  +L      F P K       K  L  +  I 
Sbjct: 93  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
               +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 153 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 515 KLGEGGFGPVYKG-RLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           +LG+G F  V +  ++L G+E A K ++++  S +  ++ + E  +   L+H N+VR+  
Sbjct: 29  ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG-IIEGIAQGLLYLHHYSRFR 630
              E+G   LI + +    L    F+    R    +A     I+ I + +L+ H   +  
Sbjct: 89  SISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCH---QMG 141
Query: 631 IIHRDLKASNVLLDRDMN---PKISDFGLARMFGGDE 664
           ++HRDLK  N+LL   +     K++DFGLA    G++
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 178

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQSGQGLEEFKNEML 556
            S  A   +F +   LG+G FG V+  R +    +G   A+K L   + +  +  + +M 
Sbjct: 21  GSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKME 80
Query: 557 --LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE 614
             ++A + H  +V++      +G+  LIL+++    L    F    K ++  +  +    
Sbjct: 81  RDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY- 135
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +A+  L L H     II+RDLK  N+LLD + + K++DFGL++
Sbjct: 136 -LAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 178

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 45  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 160
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGLAR    DE+ G
Sbjct: 161 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG 204

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 516 LGEGGFGPVYKG------RLLNGEEVAVKRLSSQSGQGLEEFKNEM----LLIAKLQHRN 565
           LG G FG V +       +      VAVK L  + G    E +  M    +LI    H N
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 566 LVRILGCCIEQGEKIL-ILEYMPNKSLDVFL------FDPTK-------KRLLGWQARIG 611
           +V +LG C + G  ++ I+E+    +L  +L      F P K       K  L  +  I 
Sbjct: 84  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
               +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 510 FSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKLQHRNLV 567
           F  +  LG G F  V        G+  AVK +  ++ +G E   +NE+ ++ K++H N+V
Sbjct: 24  FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHY 626
            +           L+++ +    L    FD   +K     +    +I  +   + YLH  
Sbjct: 84  ALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDASTLIRQVLDAVYYLH-- 137
Query: 627 SRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFG-GD 663
            R  I+HRDLK  N+L    D +    ISDFGL++M G GD
Sbjct: 138 -RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 516 LGEGGFGPVYKG------RLLNGEEVAVKRLSSQSGQGLEEFKNEM----LLIAKLQHRN 565
           LG G FG V +       +      VAVK L  + G    E +  M    +LI    H N
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 566 LVRILGCCIEQGEKILIL-EYMPNKSLDVFL------FDPTK-------KRLLGWQARIG 611
           +V +LG C + G  ++++ E+    +L  +L      F P K       K  L  +  I 
Sbjct: 84  VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
               +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 497 LFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKN 553
           +F  +     +E +    KLG G +G V   R  +   E A+K  R +S S     +   
Sbjct: 26  MFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE 85
Query: 554 EMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG-I 612
           E+ ++  L H N++++     ++    L++E      L    FD    R+   +     I
Sbjct: 86  EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL----FDEIIHRMKFNEVDAAVI 141
Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNT 669
           I+ +  G+ YLH ++   I+HRDLK  N+LL   ++D   KI DFGL+ +F   E Q   
Sbjct: 142 IKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKM 195
Query: 670 KRIVGT 675
           K  +GT
Sbjct: 196 KERLGT 201

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKSQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DFGL R    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-HTDDEMTG 181

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 516 LGEGGFGPVYKG------RLLNGEEVAVKRLSSQSGQGLEEFKNEM----LLIAKLQHRN 565
           LG G FG V +       +      VAVK L  + G    E +  M    +LI    H N
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKML--KEGATHSEHRALMSELKILIHIGHHLN 83
Query: 566 LVRILGCCIEQGEKILIL-EYMPNKSLDVFL------FDPTK-------KRLLGWQARIG 611
           +V +LG C + G  ++++ E+    +L  +L      F P K       K  L  +  I 
Sbjct: 84  VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
               +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 144 YSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKR-LSSQSGQGLEEFK-NEMLLIAKLQHR 564
           E +    K+GEG +G V+K R  + G+ VA+K+ L S+    +++    E+ ++ +L+H 
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI--GIIEGIA-QGLL 621
           NLV +L     +    L+ EY  +  L           L  +Q  +   +++ I  Q L 
Sbjct: 63  NLVNLLEVFRRKRRLHLVFEYCDHTVL---------HELDRYQRGVPEHLVKSITWQTLQ 113
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG 662
            ++   +   IHRD+K  N+L+ +    K+ DFG AR+  G
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSS----QSGQGLEEFKNEM----LLIAKLQHRNLV 567
           LG G FG V +      ++ A  R  +    + G    E +  M    +LI    H N+V
Sbjct: 72  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 568 RILGCCIEQGEKIL-ILEYMPNKSLDVFL------FDPTK-------KRLLGWQARIGII 613
            +LG C + G  ++ I+E+    +L  +L      F P K       K  L  +  I   
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 24/161 (14%)
Query: 516 LGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI----- 569
           LG GG G V+     +  + VA+K++     Q ++    E+ +I +L H N+V++     
Sbjct: 19  LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 570 ---------LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
                    +G   E     ++ EYM     +V    P    LL   AR+ + + + +GL
Sbjct: 79  PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP----LLEEHARLFMYQ-LLRGL 133
Query: 621 LYLHHYSRFRIIHRDLKASNVLLD-RDMNPKISDFGLARMF 660
            Y+H  +   ++HRDLK +N+ ++  D+  KI DFGLAR+ 
Sbjct: 134 KYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIM 171

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 515 KLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEML----LIAKLQHRNLVRI 569
           +LG G FG V KG   +      V     ++       K+E+L    ++ +L +  +VR+
Sbjct: 34  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G C E    +L++E      L+ +L    + R +  +  I ++  ++ G+ YL   S F
Sbjct: 94  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE-SNF 148
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +HRDL A NVLL      KISDFGL++    DE
Sbjct: 149 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 515 KLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEML----LIAKLQHRNLVRI 569
           +LG G FG V KG   +      V     ++       K+E+L    ++ +L +  +VR+
Sbjct: 34  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G C E    +L++E      L+ +L    + R +  +  I ++  ++ G+ YL   S F
Sbjct: 94  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE-SNF 148
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +HRDL A NVLL      KISDFGL++    DE
Sbjct: 149 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 181

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC-----CIEQGEKI-LILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L        +E+ + + L++E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLXQVIQMELDHERMSYLLYQMLXGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDXTLKILDFGLARTAG 177

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 505 AATENFSMECKLGEGGFGPVYKGRLLNGEEV----AVKRLSSQSGQGLEEFKNEML--LI 558
           A    F +   LG+G FG V+  + ++G +     A+K L   + +  +  + +M   ++
Sbjct: 21  ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
            ++ H  +V++      +G+  LIL+++    L    F    K ++  +  +     +A+
Sbjct: 81  VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY--LAE 134
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             L L H     II+RDLK  N+LLD + + K++DFGL++
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI D+GLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-HTDDEMTG 181

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC-----CIEQGEKI-LILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L        +E+ + + L++E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLXQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDXTLKILDFGLARTAG 177

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 515 KLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEML----LIAKLQHRNLVRI 569
           +LG G FG V KG   +      V     ++       K+E+L    ++ +L +  +VR+
Sbjct: 32  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G C E    +L++E      L+ +L    + R +  +  I ++  ++ G+ YL   S F
Sbjct: 92  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE-SNF 146
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +HRDL A NVLL      KISDFGL++    DE
Sbjct: 147 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 179

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 516 LGEGGFGPVYKGRLLN------GEEVAVKRLS-SQSGQGLEEFKNEMLLIAKL-QHRNLV 567
           LG G FG V +              VAVK L  S      E   +E+ +++ L  H N+V
Sbjct: 54  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 568 RILGCCIEQGEKILILEY--------MPNKSLDVFLFDPTKKRLLGWQARIGIIEG---- 615
            +LG C   G  ++I EY           +  D F+   T   ++        +E     
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 616 ---IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE---LQGNT 669
              +A+G+ +L   +    IHRDL A N+LL      KI DFGLAR    D    ++GN 
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 670 K 670
           +
Sbjct: 231 R 231

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE-EFKNEML----LIAKLQHRNLVRI 569
           +LG G FG V KG     + V    +     +  +   K+E+L    ++ +L +  +VR+
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G C E    +L++E      L+ +L    + R +  +  I ++  ++ G+ YL   S F
Sbjct: 74  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE-SNF 128
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +HRDL A NVLL      KISDFGL++    DE
Sbjct: 129 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 161

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G + A K +      SS+ G   E+ + E+ ++ ++QH N++
Sbjct: 18  ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + ILI E +    L  FL    +K  L  +     ++ I  G+ YLH   
Sbjct: 78  TLHEVYENKTDVILIGELVAGGELFDFL---AEKESLTEEEATEFLKQILNGVYYLH--- 131
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLARMFG-GDELQGNTKRIVGT 675
             +I H DLK  N+ LLDR++     KI DFGLA     G+E     K I GT
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF----KNIFGT 180

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC-----CIEQGEKILILEYMP 587
           VA+K+LS   Q+    +    E++L+  + H+N++ +L        +E+ + + I+  + 
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 588 NKSLDVFL---FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
           + +L   +    D  +   L +Q  +GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLVGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDATLKILDFGLARTAG 177

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 515 KLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEML----LIAKLQHRNLVRI 569
           +LG G FG V KG   +      V     ++       K+E+L    ++ +L +  +VR+
Sbjct: 18  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G C E    +L++E      L+ +L    + R +  +  I ++  ++ G+ YL   S F
Sbjct: 78  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE-SNF 132
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +HRDL A NVLL      KISDFGL++    DE
Sbjct: 133 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC-----CIEQGEKI-LILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L        +E+ + + L++E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDXTLKILDFGLARTAG 177

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 20/175 (11%)
Query: 497 LFSLASVAAATENFSMEC-------KLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGL 548
           L S A ++   +NF ++        +LG G +G V K R + +G+ +AVKR+ +      
Sbjct: 33  LDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--- 89
Query: 549 EEFKNEMLLIAKLQHRNL-----VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL 603
            + +  +L+   +  R +     V   G    +G+  + +E M + SLD F      K  
Sbjct: 90  SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQ 148
Query: 604 LGWQARIG-IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
              +  +G I   I + L +LH  S+  +IHRD+K SNVL++     K+ DFG++
Sbjct: 149 TIPEDILGKIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 504 AAATENFSMECKLGEGGFGPVYKGRLLNGEE-VAVKRLSSQSGQGLE--EFKNEMLLIAK 560
               +N+ ++  +G G +G VY     N  + VA+K+++      ++      E+ ++ +
Sbjct: 24  VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 561 LQHRNLVRILGCCIEQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           L+   ++R+    I +     +++ I+  + +  L      P     L  Q    I+  +
Sbjct: 84  LKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEQHVKTILYNL 140
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             G  ++H      IIHRDLK +N LL++D + KI DFGLAR    D+
Sbjct: 141 LLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE-EFKNEML----LIAKLQHRNLVRI 569
           +LG G FG V KG     + V    +     +  +   K+E+L    ++ +L +  +VR+
Sbjct: 18  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G C E    +L++E      L+ +L    + R +  +  I ++  ++ G+ YL   S F
Sbjct: 78  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE-SNF 132
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +HRDL A NVLL      KISDFGL++    DE
Sbjct: 133 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 165

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC-----CIEQGEKILILEYMP 587
           VA+K+LS   Q+    +    E++L+  + H+N++ +L        +E+ + + I+  + 
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 588 NKSLDVFL---FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
           + +L   +    D  +   L +Q  +GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLVGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDATLKILDFGLARTAG 177

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE-EFKNEML----LIAKLQHRNLVRI 569
           +LG G FG V KG     + V    +     +  +   K+E+L    ++ +L +  +VR+
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G C E    +L++E      L+ +L    + R +  +  I ++  ++ G+ YL   S F
Sbjct: 84  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE-SNF 138
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +HRDL A NVLL      KISDFGL++    DE
Sbjct: 139 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI DF LAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-HTDDEMTG 181

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC-----CIEQGEKILILEYMP 587
           VA+K+LS   Q+    +    E++L+  + H+N++ +L        +E+ + + I+  + 
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 588 NKSLDVFL---FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
           + +L   +    D  +   L +Q  +GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLSQVIQMELDHERMSYLLYQMLVGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDATLKILDFGLARTAG 177

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 505 AATENFSMECKLGEGGFGPVYKGRLLNGEEV----AVKRLSSQSGQGLEEFKNEML--LI 558
           A    F +   LG+G FG V+  + ++G +     A+K L   + +  +  + +M   ++
Sbjct: 22  ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 81
Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
            ++ H  +V++      +G+  LIL+++    L    F    K ++  +  +     +A+
Sbjct: 82  VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY--LAE 135
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             L L H     II+RDLK  N+LLD + + K++DFGL++
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 175

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 12/160 (7%)
Query: 505 AATENFSMECKLGEGGFGPVYKGRLLNGEEV----AVKRLSSQSGQGLEEFKNEML--LI 558
           A    F +   LG+G FG V+  + ++G +     A+K L   + +  +  + +M   ++
Sbjct: 21  ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
            ++ H  +V++      +G+  LIL+++    L    F    K ++  +  +     +A+
Sbjct: 81  VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFY--LAE 134
Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             L L H     II+RDLK  N+LLD + + K++DFGL++
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE-EFKNEML----LIAKLQHRNLVRI 569
           +LG G FG V KG     + V    +     +  +   K+E+L    ++ +L +  +VR+
Sbjct: 12  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G C E    +L++E      L+ +L    + R +  +  I ++  ++ G+ YL   S F
Sbjct: 72  IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE-SNF 126
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +HRDL A NVLL      KISDFGL++    DE
Sbjct: 127 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 159

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 516 LGEGGFGPVYKGRLLN------GEEVAVKRLS-SQSGQGLEEFKNEMLLIAKL-QHRNLV 567
           LG G FG V +              VAVK L  S      E   +E+ +++ L  H N+V
Sbjct: 31  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 568 RILGCCIEQGEKILILEY--------MPNKSLDVFLFDPTKKRLLGWQARIGIIEG---- 615
            +LG C   G  ++I EY           +  D F+   T   ++        +E     
Sbjct: 91  NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 616 ---IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE---LQGNT 669
              +A+G+ +L   +    IHRDL A N+LL      KI DFGLAR    D    ++GN 
Sbjct: 151 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 670 K 670
           +
Sbjct: 208 R 208

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  L++E M
Sbjct: 90  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 150 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 198
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 199 SDCTLKILDFGLARTAG 215

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKL 561
             +NF     LG+G FG V   R+   G+  AVK L          +E    E  +++  
Sbjct: 21  GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           ++   +  L CC +  +++  +    N   D+       +R    +AR    E I   L+
Sbjct: 81  RNHPFLTQLFCCFQTPDRLFFVMEFVNGG-DLMFHIQKSRRFDEARARFYAAE-IISALM 138
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +LH      II+RDLK  NVLLD + + K++DFG+ +
Sbjct: 139 FLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK 172

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 29/181 (16%)
Query: 516 LGEGGFGPVYKGR---LLNGEE---VAVKRLS-SQSGQGLEEFKNEMLLIAKL-QHRNLV 567
           LG G FG V +     L+  +    VAVK L  S      E   +E+ +++ L  H N+V
Sbjct: 47  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 568 RILGCCIEQGEKILILEY--------MPNKSLDVFLFDPTKKRLLGWQARIGIIEG---- 615
            +LG C   G  ++I EY           +  D F+   T   ++        +E     
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 616 ---IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE---LQGNT 669
              +A+G+ +L   +    IHRDL A N+LL      KI DFGLAR    D    ++GN 
Sbjct: 167 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 670 K 670
           +
Sbjct: 224 R 224

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCCI 574
           +G+G FG V++G+   GEEVAVK  SS+  +    F+  E+     L+H N++  +    
Sbjct: 12  IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFIAADN 68
Query: 575 EQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH----- 625
           +      +  L+ +Y  + SL    FD   +  +  +  I +    A GL +LH      
Sbjct: 69  KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 124
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             +  I HRDLK+ N+L+ ++    I+D GLA
Sbjct: 125 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 28/179 (15%)
Query: 500 LASVAAATENFSMECKLGEGGFGPV-----------YKGRLLNGEEVAVKRLSSQSGQGL 548
           +A+    T+++ +  +LG+G F  V           Y  +++N      K+LS++  Q L
Sbjct: 23  MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIIN-----TKKLSARDHQKL 77
Query: 549 EEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQA 608
           E    E  +   L+H N+VR+     E+G   L+ + +    L    F+    R   + +
Sbjct: 78  E---REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAR--EYYS 128
Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGGDE 664
                  I Q L  ++H  +  I+HRDLK  N+LL    +    K++DFGLA    G++
Sbjct: 129 EADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ 187

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 515 KLGEGGFGPVYKG-----RLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG G FG V KG     +++    V + +  +      +E   E  ++ +L +  +VR+
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G C E    +L++E      L+ +L    + R +  +  I ++  ++ G+ YL   S F
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE-SNF 490
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +HRDL A NVLL      KISDFGL++    DE
Sbjct: 491 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 523

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 515 KLGEGGFGPVYKG-----RLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
           +LG G FG V KG     +++    V + +  +      +E   E  ++ +L +  +VR+
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G C E    +L++E      L+ +L    + R +  +  I ++  ++ G+ YL   S F
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE-SNF 491
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +HRDL A NVLL      KISDFGL++    DE
Sbjct: 492 --VHRDLAARNVLLVTQHYAKISDFGLSKALRADE 524

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 29/181 (16%)
Query: 516 LGEGGFGPVYKGR---LLNGEE---VAVKRLS-SQSGQGLEEFKNEMLLIAKL-QHRNLV 567
           LG G FG V +     L+  +    VAVK L  S      E   +E+ +++ L  H N+V
Sbjct: 49  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 568 RILGCCIEQGEKILILEY--------MPNKSLDVFLFDPTKKRLLGWQARIGIIEG---- 615
            +LG C   G  ++I EY           +  D F+   T   ++        +E     
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 616 ---IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE---LQGNT 669
              +A+G+ +L   +    IHRDL A N+LL      KI DFGLAR    D    ++GN 
Sbjct: 169 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 670 K 670
           +
Sbjct: 226 R 226

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 18/167 (10%)
Query: 512 MECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQ-GLEEFKNEMLLIAKLQHRNLVRI 569
           ++C LG GGFG V++ +  ++    A+KR+   + +   E+   E+  +AKL+H  +VR 
Sbjct: 10  IQC-LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQ------------ARIGIIEGIA 617
               +E+     +    P   L + +    K+ L  W               + I   IA
Sbjct: 69  FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + + +LH      ++HRDLK SN+    D   K+ DFGL      DE
Sbjct: 129 EAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 515 KLGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           +LG G FG V++      G     K +++         KNE+ ++ +L H  L+ +    
Sbjct: 58  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 574 IEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
            ++ E +LILE++        LFD    +   +     I  +    +GL ++H +S   I
Sbjct: 118 EDKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---I 170
Query: 632 IHRDLKASNVLLD--RDMNPKISDFGLARMFGGDEL 665
           +H D+K  N++ +  +  + KI DFGLA     DE+
Sbjct: 171 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCCI 574
           +G+G FG V++G+   GEEVAVK  SS+  +    F+  E+     L+H N++  +    
Sbjct: 17  IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFIAADN 73
Query: 575 EQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH----- 625
           +      +  L+ +Y  + SL    FD   +  +  +  I +    A GL +LH      
Sbjct: 74  KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 129
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             +  I HRDLK+ N+L+ ++    I+D GLA
Sbjct: 130 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 516 LGEGGFGPVYKGRLLN------GEEVAVKRLS-SQSGQGLEEFKNEMLLIAKL-QHRNLV 567
           LG G FG V +              VAVK L  S      E   +E+ +++ L  H N+V
Sbjct: 54  LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 568 RILGCCIEQGEKILILEY--------MPNKSLDVFLFDPTKKRLLGWQARIGIIEG---- 615
            +LG C   G  ++I EY           +  D F+   T   ++        +E     
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 616 ---IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE---LQGNT 669
              +A+G+ +L   +    IHRDL A N+LL      KI DFGLAR    D    ++GN 
Sbjct: 174 SYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 670 K 670
           +
Sbjct: 231 R 231

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 507 TENFSMECKLGEGGFGPVYK-GRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQH 563
           T+ + +  +LG+G F  V +  ++  G+E A K ++++  S +  ++ + E  +   L+H
Sbjct: 3   TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N+VR+     E+G   L+ + +    L    F+    R   + +       I Q L  +
Sbjct: 63  PNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAR--EYYSEADASHCIQQILESV 116
Query: 624 HHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDE 664
           +H     I+HRDLK  N+LL    +    K++DFGLA    GD+
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC-----CIEQGEKI-LILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L        +E+ + + L++E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLXQVIQMELDHERMSYLLYQMLXGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDXTLKILDFGLARTAG 177

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  L++E M
Sbjct: 45  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 105 DANLXQVIQMELDHERMSYLLYQMLXGI-----------KHLHSAGIIHRDLKPSNIVVK 153
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 154 SDXTLKILDFGLARTAG 170

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCCI 574
           +G+G FG V++G+   GEEVAVK  SS+  +    F+  E+     L+H N++  +    
Sbjct: 11  IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFIAADN 67
Query: 575 EQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH----- 625
           +      +  L+ +Y  + SL    FD   +  +  +  I +    A GL +LH      
Sbjct: 68  KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             +  I HRDLK+ N+L+ ++    I+D GLA
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 35/161 (21%)
Query: 516 LGEGGFGPV---YKGRLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           +G G +G V     GR   G +VA+K+L    QS    +    E+ L+  ++H N++ +L
Sbjct: 33  VGSGAYGAVCSAVDGR--TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 571 GCCIEQGEKILILEYMPNKSLDVF----LFDP---------TKKRLLGWQARIGIIEGIA 617
                         + P+++LD F    L  P          K   LG      ++  + 
Sbjct: 91  DV------------FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML 138
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +GL Y+H      IIHRDLK  N+ ++ D   KI DFGLAR
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           LG+G    V++GR    G+  A+K  ++ S  + ++    E  ++ KL H+N+V++    
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 574 IEQG--EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
            E     K+LI+E+ P  SL   L +P+    L     + ++  +  G   ++H     I
Sbjct: 77  EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG---MNHLRENGI 133
Query: 632 IHRDLKASNVLL----DRDMNPKISDFGLARMFGGDE 664
           +HR++K  N++     D     K++DFG AR    DE
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRNLVRILGCCI 574
           +G+G FG V++G+   GEEVAVK  SS+  +    F+  E+     L+H N++  +    
Sbjct: 14  IGKGRFGEVWRGKW-RGEEVAVKIFSSREERSW--FREAEIYQTVMLRHENILGFIAADN 70
Query: 575 EQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH----- 625
           +      +  L+ +Y  + SL    FD   +  +  +  I +    A GL +LH      
Sbjct: 71  KDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 126
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             +  I HRDLK+ N+L+ ++    I+D GLA
Sbjct: 127 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  L++E M
Sbjct: 90  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 150 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 198
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 199 SDCTLKILDFGLARTAG 215

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 24/156 (15%)
Query: 515 KLGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN-----LVR 568
           ++G G +G V K     +G+ +AVKR+ S      E+ + ++L+   +  R+     +V+
Sbjct: 29  EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSSDCPYIVQ 85
Query: 569 ILGCCIEQGEKILILEYMPNKSLDVF-------LFDPTKKRLLGWQARIGIIEGIAQGLL 621
             G    +G+  + +E M + S D F       L D   + +LG +  +  ++ +     
Sbjct: 86  FYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILG-KITLATVKALN---- 139
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             H     +IIHRD+K SN+LLDR  N K+ DFG++
Sbjct: 140 --HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 22/154 (14%)
Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
           +G G  G V      + G  VAVK+LS   Q+    +    E++L+  + H+N++ +L  
Sbjct: 32  IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 573 -----CIEQGEKI-LILEYMPNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLH 624
                 +E+ + + L++E M      V   +   +R+  L +Q   GI            
Sbjct: 92  FTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGI-----------K 140
Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           H     IIHRDLK SN+++  D   KI DFGLAR
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 516 LGEGGFGPVYKGRL--------LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           LG+G F  ++KG          L+  EV +K L        E F     +++KL H++LV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              G C+   E IL+ E++   SLD +L     K  +    ++ + + +A  + +L   +
Sbjct: 76  LNYGVCVCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAAAMHFLEENT 133
Query: 628 RFRIIHRDLKASNVLLDRDM-----NP---KISDFGLA 657
              +IH ++ A N+LL R+      NP   K+SD G++
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 516 LGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           LG+G    V++GR    G+  A+K  ++ S  + ++    E  ++ KL H+N+V++    
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 574 IEQG--EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI 631
            E     K+LI+E+ P  SL   L +P+    L     + ++  +  G   ++H     I
Sbjct: 77  EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGG---MNHLRENGI 133
Query: 632 IHRDLKASNVLL----DRDMNPKISDFGLARMFGGDE 664
           +HR++K  N++     D     K++DFG AR    DE
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G E A K +      +S+ G   EE + E+ ++ ++ H N++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + +LILE +    L  FL    +K  L  +     I+ I  G+ YLH   
Sbjct: 79  TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLA 657
             +I H DLK  N+ LLD+++   + K+ DFGLA
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 516 LGEGGFGPVYKGRLLNGEE-VAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRNLVRILGCC 573
           LG G F  V        ++ VA+K ++ ++ +G E   +NE+ ++ K++H N+V +    
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 574 IEQGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
              G   LI++ +    L    FD   +K     +    +I  +   + YLH      I+
Sbjct: 86  ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG---IV 138
Query: 633 HRDLKASNVL---LDRDMNPKISDFGLARM 659
           HRDLK  N+L   LD D    ISDFGL++M
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM 168

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 17/155 (10%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G E A K +      +S+ G   EE + E+ ++ ++ H N++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + +LILE +    L  FL    +K  L  +     I+ I  G+ YLH   
Sbjct: 79  TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLAR 658
             +I H DLK  N+ LLD+++   + K+ DFGLA 
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 516 LGEGGFGPVYKGRLLNGEE-VAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRNLVRILGCC 573
           LG G F  V        ++ VA+K ++ ++ +G E   +NE+ ++ K++H N+V +    
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 574 IEQGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
              G   LI++ +    L    FD   +K     +    +I  +   + YLH      I+
Sbjct: 86  ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIV 138
Query: 633 HRDLKASNVL---LDRDMNPKISDFGLARM 659
           HRDLK  N+L   LD D    ISDFGL++M
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM 168

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 532 GEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC-----CIEQGEKI-LIL 583
           G  VAVK+LS   Q+    +    E++L+  + H+N++ +L        +E+ + + L++
Sbjct: 47  GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 584 EYMPNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNV 641
           E M      V   +   +R+  L +Q   GI            H     IIHRDLK SN+
Sbjct: 107 ELMDANLCQVIHMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNI 155
Query: 642 LLDRDMNPKISDFGLAR 658
           ++  D   KI DFGLAR
Sbjct: 156 VVKSDCTLKILDFGLAR 172

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 516 LGEGGFGPVYKGRLLNGEE-VAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRNLVRILGCC 573
           LG G F  V        ++ VA+K ++ ++ +G E   +NE+ ++ K++H N+V +    
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 574 IEQGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
              G   LI++ +    L    FD   +K     +    +I  +   + YLH      I+
Sbjct: 86  ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG---IV 138
Query: 633 HRDLKASNVL---LDRDMNPKISDFGLARM 659
           HRDLK  N+L   LD D    ISDFGL++M
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM 168

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 24/156 (15%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLS------SQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           +G G +G V   R  L G++VA+K++       + + + L E K    ++   +H N++ 
Sbjct: 63  IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK----ILKHFKHDNIIA 118
Query: 569 I---LGCCIEQGE---KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           I   L   +  GE     ++L+ M +   D+     + + L     R  + + + +GL Y
Sbjct: 119 IKDILRPTVPYGEFKSVYVVLDLMES---DLHQIIHSSQPLTLEHVRYFLYQ-LLRGLKY 174
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +H     ++IHRDLK SN+L++ +   KI DFG+AR
Sbjct: 175 MH---SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 207

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G E A K +      +S+ G   EE + E+ ++ ++ H N++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + +LILE +    L  FL    +K  L  +     I+ I  G+ YLH   
Sbjct: 79  TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLA 657
             +I H DLK  N+ LLD+++   + K+ DFGLA
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGC-----CIEQGEKI-LILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L        +E+ + + L++E M
Sbjct: 53  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 113 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 161
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 162 SDCTLKILDFGLARTAG 178

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G E A K +      +S+ G   EE + E+ ++ ++ H N++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + +LILE +    L  FL    +K  L  +     I+ I  G+ YLH   
Sbjct: 79  TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLA 657
             +I H DLK  N+ LLD+++   + K+ DFGLA
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  L++E M
Sbjct: 51  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 110
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 111 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 159
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 160 SDCTLKILDFGLARTAG 176

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  L++E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDCTLKILDFGLARTAG 177

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 507 TENFSMECKLGEGGFGPVYK-GRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQH 563
           T+ + +  +LG+G F  V +  ++  G+E A K ++++  S +  ++ + E  +   L+H
Sbjct: 3   TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N+VR+     E+G   L+ + +    L    F+    R   + +       I Q L  +
Sbjct: 63  PNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAR--EYYSEADASHCIQQILESV 116
Query: 624 HHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDE 664
           +H     I+HRDLK  N+LL    +    K++DFGLA    GD+
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI  FGLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-HTDDEMTG 181

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 515 KLGEGGFGPVYKGR-----LLNGEEVAVKRLSSQSGQGL--EEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R     L    +   KR S  S +G+  EE + E+ ++ ++ H N++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + +LILE +    L  FL    +K  L  +     I+ I  G+ YLH   
Sbjct: 79  TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLA 657
             +I H DLK  N+ LLD+++   + K+ DFGLA
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 498 FSLASVAAATENFSMECKLGEGGFGPVYK-GRLLNGEEVAVKRLSSQ--SGQGLEEFKNE 554
           F + +    ++N+ ++ +LG+G F  V +      G E A K ++++  S +  ++ + E
Sbjct: 19  FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 555 MLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE 614
             +  KLQH N+VR+     E+    L+ + +    L     D   +           I+
Sbjct: 79  ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQ 135
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLA 657
            I + + Y H      I+HR+LK  N+LL    +    K++DFGLA
Sbjct: 136 QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 178

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  L++E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDCTLKILDFGLARTAG 177

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  L++E M
Sbjct: 53  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 112
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 113 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 161
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 162 SDCTLKILDFGLARTAG 178

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 516 LGEGGFGPVYKGRLLNGEE-VAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRNLVRILGCC 573
           LG G F  V        ++ VA+K ++ ++ +G E   +NE+ ++ K++H N+V +    
Sbjct: 26  LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 574 IEQGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRII 632
              G   LI++ +    L    FD   +K     +    +I  +   + YLH      I+
Sbjct: 86  ESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIV 138
Query: 633 HRDLKASNVL---LDRDMNPKISDFGLARM 659
           HRDLK  N+L   LD D    ISDFGL++M
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM 168

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 499 SLASVAAATENFSMEC-----KLGEGGFGPVYKGRLLNGE--------EVAVKRLSSQSG 545
           S  SV    E    EC      LG+GG+G V++ R + G         +V  K +  ++ 
Sbjct: 3   SETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNA 62
Query: 546 QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLG 605
           +     K E  ++ +++H  +V ++      G+  LILEY+    L + L    ++ +  
Sbjct: 63  KDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFM 119
Query: 606 WQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                  +  I+  L +LH      II+RDLK  N++L+   + K++DFGL +
Sbjct: 120 EDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 499 SLASVAAATENFSMEC-----KLGEGGFGPVYKGRLLNGE--------EVAVKRLSSQSG 545
           S  SV    E    EC      LG+GG+G V++ R + G         +V  K +  ++ 
Sbjct: 3   SETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNA 62
Query: 546 QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLG 605
           +     K E  ++ +++H  +V ++      G+  LILEY+    L + L    ++ +  
Sbjct: 63  KDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFM 119
Query: 606 WQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                  +  I+  L +LH      II+RDLK  N++L+   + K++DFGL +
Sbjct: 120 EDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQHRNLVRILGCC 573
           +GEG +G V      +    VA+K++S    Q   +    E+ ++ + +H N++ I    
Sbjct: 51  IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
                + +   Y+    ++  L+   K + L        +  I +GL Y+H  +   ++H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN---VLH 167
Query: 634 RDLKASNVLLDRDMNPKISDFGLARM 659
           RDLK SN+L++   + KI DFGLAR+
Sbjct: 168 RDLKPSNLLINTTCDLKICDFGLARI 193

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  L++E M
Sbjct: 45  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 104
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 105 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 153
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 154 SDCTLKILDFGLARTAG 170

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI D GLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-HTDDEMTG 181

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  L++E M
Sbjct: 46  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 106 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 154
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 155 SDCTLKILDFGLARTAG 171

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 516 LGEGGFGPVYKGRLLN---GEEVAVK-----RLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +G+G F  V   R +N   G++ AVK     + +S  G   E+ K E  +   L+H ++V
Sbjct: 32  IGKGAFSVVR--RCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI----IEGIAQGLLYL 623
            +L      G   ++ E+M    L    F+  K+   G+     +    +  I + L Y 
Sbjct: 90  ELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNP---KISDFGLARMFGGDELQGNTKRIVGT 675
           H  +   IIHRD+K  NVLL    N    K+ DFG+A   G   L    +  VGT
Sbjct: 147 HDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR--VGT 196

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  L++E M
Sbjct: 46  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 105
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 106 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 154
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 155 SDCTLKILDFGLARTAG 171

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQH 563
           ++N+ ++ +LG+G F  V +      G E A K ++++  S +  ++ + E  +  KLQH
Sbjct: 4   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N+VR+     E+    L+ + +    L     D   +           I+ I + + Y 
Sbjct: 64  PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 624 HHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLA 657
           H      I+HR+LK  N+LL    +    K++DFGLA
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 154

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 24/156 (15%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLS------SQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           +G G +G V   R  L G++VA+K++       + + + L E K    ++   +H N++ 
Sbjct: 62  IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK----ILKHFKHDNIIA 117
Query: 569 I---LGCCIEQGE---KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           I   L   +  GE     ++L+ M +   D+     + + L     R  + + + +GL Y
Sbjct: 118 IKDILRPTVPYGEFKSVYVVLDLMES---DLHQIIHSSQPLTLEHVRYFLYQ-LLRGLKY 173
Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +H     ++IHRDLK SN+L++ +   KI DFG+AR
Sbjct: 174 MH---SAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 17/155 (10%)
Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRL------SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +LG G F  V K R  + G E A K +      +S+ G   EE + E+ ++ ++ H N++
Sbjct: 19  ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
            +      + + +LILE +    L  FL    +K  L  +     I+ I  G+ YLH   
Sbjct: 79  TLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEEEATSFIKQILDGVNYLHTK- 134
Query: 628 RFRIIHRDLKASNV-LLDRDM---NPKISDFGLAR 658
             +I H DLK  N+ LLD+++   + K+ DFGLA 
Sbjct: 135 --KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQH 563
           ++N+ ++ +LG+G F  V +      G E A K ++++  S +  ++ + E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N+VR+     E+    L+ + +    L     D   +           I+ I + + Y 
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 624 HHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLA 657
           H      I+HR+LK  N+LL    +    K++DFGLA
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLD 592
           VA+K+LS   Q+    +    E++L+  + H+N++ +L              + P KSL+
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV------------FTPQKSLE 99
Query: 593 VF--------LFDPTKKRLLGWQ---ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNV 641
            F        L D    +++  +    R+  +  + Q L  + H     IIHRDLK SN+
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 642 LLDRDMNPKISDFGLARMFG 661
           ++  D   KI DFGLAR  G
Sbjct: 158 VVKSDATLKILDFGLARTAG 177

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQH 563
           ++N+ ++ +LG+G F  V +      G E A K ++++  S +  ++ + E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N+VR+     E+    L+ + +    L     D   +           I+ I + + Y 
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 624 HHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLA 657
           H      I+HR+LK  N+LL    +    K++DFGLA
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA 155

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEML---LIAKLQHRNLVRILG 571
           LG GGFG V+  ++   G+  A K+L+ +  +  + ++  M+   ++AK+  R +V +  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII--EGIAQGLLYLHHYSRF 629
               + +  L++  M    +   +++  +    G+Q    I     I  GL +LH  +  
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP-GFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            II+RDLK  NVLLD D N +ISD GLA        Q  TK   GT
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI D GLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-HTDDEMTG 181

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEML---LIAKLQHRNLVRILG 571
           LG GGFG V+  ++   G+  A K+L+ +  +  + ++  M+   ++AK+  R +V +  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII--EGIAQGLLYLHHYSRF 629
               + +  L++  M    +   +++  +    G+Q    I     I  GL +LH  +  
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP-GFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            II+RDLK  NVLLD D N +ISD GLA        Q  TK   GT
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEML---LIAKLQHRNLVRILG 571
           LG GGFG V+  ++   G+  A K+L+ +  +  + ++  M+   ++AK+  R +V +  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII--EGIAQGLLYLHHYSRF 629
               + +  L++  M    +   +++  +    G+Q    I     I  GL +LH  +  
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP-GFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            II+RDLK  NVLLD D N +ISD GLA        Q  TK   GT
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 502 SVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAK 560
           S+    ++     +LG G +G V K R + +G+ +AVKR+ +       + +  +L+   
Sbjct: 1   SMEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLD 57
Query: 561 LQHRNL-----VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG-IIE 614
           +  R +     V   G    +G+  + +E M + SLD F      K     +  +G I  
Sbjct: 58  ISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAV 116
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
            I + L +LH  S+  +IHRD+K SNVL++     K+ DFG++
Sbjct: 117 SIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 516 LGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEML---LIAKLQHRNLVRILG 571
           LG GGFG V+  ++   G+  A K+L+ +  +  + ++  M+   ++AK+  R +V +  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII--EGIAQGLLYLHHYSRF 629
               + +  L++  M    +   +++  +    G+Q    I     I  GL +LH  +  
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP-GFQEPRAIFYTAQIVSGLEHLHQRN-- 309
Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            II+RDLK  NVLLD D N +ISD GLA        Q  TK   GT
Sbjct: 310 -IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGT 352

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 510 FSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLV 567
           + M+ +LG GGFG V +      GE+VA+K+   + S +  E +  E+ ++ KL H N+V
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG--------IAQG 619
                 +  G + L    +P  +++       +K L  ++   G+ EG        I+  
Sbjct: 77  SARE--VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGGDEL 665
           L YLH     RIIHRDLK  N++L    + +  KI D G A+     EL
Sbjct: 135 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 180

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 18/169 (10%)
Query: 510 FSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLV 567
           + M+ +LG GGFG V +      GE+VA+K+   + S +  E +  E+ ++ KL H N+V
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG--------IAQG 619
                 +  G + L    +P  +++       +K L  ++   G+ EG        I+  
Sbjct: 76  SARE--VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGGDEL 665
           L YLH     RIIHRDLK  N++L    + +  KI D G A+     EL
Sbjct: 134 LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 508 ENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H 
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 565 NLVRILGC-----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +G
Sbjct: 82  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILRG 137
Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG 667
           L Y+H      IIHRDLK SN+ ++ D   KI D GLAR    DE+ G
Sbjct: 138 LKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-HTDDEMTG 181

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLD 592
           VA+K+LS   Q+    +    E++L+  + H+N++ +L              + P KSL+
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 593 VF--------LFDPTKKRLLGWQ---ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNV 641
            F        L D    +++  +    R+  +  + Q L  + H     IIHRDLK SN+
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 642 LLDRDMNPKISDFGLARMFG 661
           ++  D   KI DFGLAR  G
Sbjct: 158 VVKSDATLKILDFGLARTAG 177

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  +++E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDCTLKILDFGLARTAG 177

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 516 LGEGGFGPVYKGRL--------LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           LG+G F  ++KG          L+  EV +K L        E F     +++KL H++LV
Sbjct: 16  LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
              G C    E IL+ E++   SLD +L     K  +    ++ + + +A  + +L   +
Sbjct: 76  LNYGVCFCGDENILVQEFVKFGSLDTYL--KKNKNCINILWKLEVAKQLAWAMHFLEENT 133
Query: 628 RFRIIHRDLKASNVLLDRDM-----NP---KISDFGLA 657
              +IH ++ A N+LL R+      NP   K+SD G++
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLD 592
           VA+K+LS   Q+    +    E++L+  + H+N++ +L              + P KSL+
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV------------FTPQKSLE 99
Query: 593 VF--------LFDPTKKRLLGWQ---ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNV 641
            F        L D    +++  +    R+  +  + Q L  + H     IIHRDLK SN+
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYL--LYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 642 LLDRDMNPKISDFGLARMFG 661
           ++  D   KI DFGLAR  G
Sbjct: 158 VVKSDCTLKILDFGLARTAG 177

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  +++E M
Sbjct: 46  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 105
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 106 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 154
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 155 SDCTLKILDFGLARTAG 171

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  +++E M
Sbjct: 57  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 116
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 117 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 165
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 166 SDCTLKILDFGLARTAG 182

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  +++E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDCTLKILDFGLARTAG 177

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  +++E M
Sbjct: 53  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 113 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 161
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 162 SDCTLKILDFGLARTAG 178

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 504 AAATENFSMECKLGEGGFGPVYKGRLLNGEE-VAVKRLSSQSGQGLE--EFKNEMLLIAK 560
               +N+ ++  +G G +G VY     N E+ VA+K+++      ++      E+ ++ +
Sbjct: 22  VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 561 LQHRNLVRILGCCIEQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           L+   ++R+    I       +++ I+  + +  L      P     L  +    I+  +
Sbjct: 82  LKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEEHIKTILYNL 138
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             G  ++H      IIHRDLK +N LL++D + K+ DFGLAR    ++
Sbjct: 139 LLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  +++E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDCTLKILDFGLARTAG 177

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  +++E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDCTLKILDFGLARTAG 177

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  +++E M
Sbjct: 54  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 114 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 162
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 163 SDCTLKILDFGLARTAG 179

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 535 VAVKRLSS--QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKILILEYM 586
           VA+K+LS   Q+    +    E++L+  + H+N++ +L     Q       +  +++E M
Sbjct: 52  VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 587 PNKSLDVFLFDPTKKRL--LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
                 V   +   +R+  L +Q   GI            H     IIHRDLK SN+++ 
Sbjct: 112 DANLCQVIQMELDHERMSYLLYQMLCGI-----------KHLHSAGIIHRDLKPSNIVVK 160
Query: 645 RDMNPKISDFGLARMFG 661
            D   KI DFGLAR  G
Sbjct: 161 SDCTLKILDFGLARTAG 177

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFK-NEMLLIAKLQHRNLVRILGC 572
           CK+G G +G VYK +  +G++     L    G G+      E+ L+ +L+H N++ +   
Sbjct: 27  CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKV 86
Query: 573 CIEQGEKI--LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY-----LHH 625
            +   ++   L+ +Y  +    +  F    K     +  + +  G+ + LLY     +H+
Sbjct: 87  FLSHADRKVWLLFDYAEHDLWHIIKFHRASK---ANKKPVQLPRGMVKSLLYQILDGIHY 143
Query: 626 YSRFRIIHRDLKASNVLL----DRDMNPKISDFGLARMF 660
                ++HRDLK +N+L+          KI+D G AR+F
Sbjct: 144 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 515 KLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN---LVRIL 570
           ++G G  G V+K R    G  +AVK++  +SG   E  +  M L   L+  +   +V+  
Sbjct: 32  EMGSGTCGQVWKMRFRKTGHVIAVKQMR-RSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 571 GCCIEQGEKILILEYMPN--KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
           G  I   +  + +E M    + L   +  P  +R+LG      +   I + L YL    +
Sbjct: 91  GTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYYLKE--K 143
Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             +IHRD+K SN+LLD     K+ DFG++
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGIS 172

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 26/165 (15%)
Query: 510 FSMECKLGEGGFGPVYKGRLLNGE--------EVAVKRLSSQSGQGLEEFKNEMLLIAKL 561
              + ++G G F  VYKG  L+ E        E+  ++L+    Q    FK E   +  L
Sbjct: 28  LKFDIEIGRGSFKTVYKG--LDTETTVEVAWCELQDRKLTKSERQ---RFKEEAEXLKGL 82
Query: 562 QHRNLVRILGC--CIEQGEK--ILILEYMPNKSLDVFL--FDPTKKRLLGWQARIGIIEG 615
           QH N+VR         +G+K  +L+ E   + +L  +L  F   K ++L    R      
Sbjct: 83  QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCR-----Q 137
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLARM 659
           I +GL +LH  +   IIHRDLK  N+ +     + KI D GLA +
Sbjct: 138 ILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 78/161 (48%), Gaps = 15/161 (9%)
Query: 505 AATENFSMECKLGEGGFGPVYKGRLLNGEEV--AVKRLSSQSGQGLEEFKNEM----LLI 558
           A   +F     +G+G FG V   R    EEV  AVK L  ++    +E K+ M    +L+
Sbjct: 35  AKPSDFHFLKVIGKGSFGKVLLARH-KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 559 AKLQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIA 617
             ++H  LV  L    +  +K+  +L+Y+    L  F     ++  L  +AR    E IA
Sbjct: 94  KNVKHPFLVG-LHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAE-IA 149
Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             L YLH      I++RDLK  N+LLD   +  ++DFGL +
Sbjct: 150 SALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK 187

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 507 TENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSSQ--------SGQGLEEFKNEMLL 557
           ++ +S    LG G FG V+        +EV VK +  +            L +   E+ +
Sbjct: 23  SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIA 617
           +++++H N++++L     QG   L++E      LD+F F     RL    A       I 
Sbjct: 83  LSRVEHANIIKVLDIFENQGFFQLVMEKH-GSGLDLFAFIDRHPRLDEPLASY-----IF 136
Query: 618 QGLLYLHHYSRFR-IIHRDLKASNVLLDRDMNPKISDFGLA 657
           + L+    Y R + IIHRD+K  N+++  D   K+ DFG A
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     +G G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EYMP    D+F       R     AR       
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYA---- 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    K++DFG A+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGT 201

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQSGQGLEE-FKNEMLLIAKL 561
           ++ + +   +G G FG     RL+      E VAVK +  + G+ ++E  K E++    L
Sbjct: 18  SDRYELVKDIGAGNFG---VARLMRDKQANELVAVKYI--ERGEKIDENVKREIINHRSL 72
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N+VR     +      +++EY     L  F       R    +AR    + +  G+ 
Sbjct: 73  RHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARF-FFQQLISGVS 129
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNP--KISDFGLARMFGGDELQGNTKRIVGT 675
           Y H     ++ HRDLK  N LLD    P  KI+DFG ++      L    K  VGT
Sbjct: 130 YAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGT 179

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 508 ENFSMECKLGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
           +++ +  +LG G FG V++      G   A K + +      E  + E+  ++ L+H  L
Sbjct: 51  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           V +     +  E ++I E+M    L   + D   K  +     +  +  + +GL ++H  
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHEN 168
Query: 627 SRFRIIHRDLKASNVLL--DRDMNPKISDFGLA 657
           +    +H DLK  N++    R    K+ DFGL 
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNELKLIDFGLT 198

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 516 LGEGGFGPVY--KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           LG G F  V+  K RL  G+  A+K +           +NE+ ++ K++H N+V +    
Sbjct: 17  LGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG-IIEGIAQGLLYLHHYSRFRII 632
                  L+++ +        LFD   +R +  +     +I+ +   + YLH      I+
Sbjct: 76  ESTTHYYLVMQLVSGGE----LFDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IV 128
Query: 633 HRDLKASNVL-LDRDMNPK--ISDFGLARM 659
           HRDLK  N+L L  + N K  I+DFGL++M
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKM 158

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     +G G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EYMP    D+F       R     AR       
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGG--DMFSHLRRIGRFSEPHARFYA---- 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    K++DFG A+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGT 201

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L+E +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY P   +   L      R +G  +        
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFSEPHARFYA 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+++D+    K++DFGLA+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----RVKGRTWXLCGT 201

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 515 KLGEGGFGPV--YKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
           KLGEGGF  V   +G L +G   A+KR+     Q  EE + E  +     H N++R++  
Sbjct: 36  KLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 573 CI-EQG---EKILILEYMPNKSL-DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           C+ E+G   E  L+L +    +L +       K   L     + ++ GI +GL  +H   
Sbjct: 95  CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG 154
Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFG 655
                HRDLK +N+LL  +  P + D G
Sbjct: 155 ---YAHRDLKPTNILLGDEGQPVLMDLG 179

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 510 FSMECKLGEGGFGPVYKGRLLNGEEV--AVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +++E  +G G +G V K  +  G  +  A K++     + ++ FK E+ ++  L H N++
Sbjct: 28  YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R+     +  +  L++E      L         KR+        I++ +   + Y H   
Sbjct: 87  RLYETFEDNTDIYLVMELCTGGEL---FERVVHKRVFRESDAARIMKDVLSAVAYCH--- 140
Query: 628 RFRIIHRDLKASNVLL--DRDMNP-KISDFGLARMF 660
           +  + HRDLK  N L   D   +P K+ DFGLA  F
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 176

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 8/153 (5%)
Query: 508 ENFSMECKLGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
           +++ +  +LG G FG V++      G   A K + +      E  + E+  ++ L+H  L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           V +     +  E ++I E+M    L   + D   K  +     +  +  + +GL ++H  
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMHEN 274
Query: 627 SRFRIIHRDLKASNVLL--DRDMNPKISDFGLA 657
           +    +H DLK  N++    R    K+ DFGL 
Sbjct: 275 N---YVHLDLKPENIMFTTKRSNELKLIDFGLT 304

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 510 FSMECKLGEGGFGPVYKGRLLNGEEV--AVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +++E  +G G +G V K  +  G  +  A K++     + ++ FK E+ ++  L H N++
Sbjct: 11  YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R+     +  +  L++E      L         KR+        I++ +   + Y H   
Sbjct: 70  RLYETFEDNTDIYLVMELCTGGEL---FERVVHKRVFRESDAARIMKDVLSAVAYCH--- 123
Query: 628 RFRIIHRDLKASNVLL--DRDMNP-KISDFGLARMF 660
           +  + HRDLK  N L   D   +P K+ DFGLA  F
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 505 AATENFSMEC-------KLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEML 556
            A ENF ++        +LG G +G V K R + +G+  AVKR+ +       + +  +L
Sbjct: 24  GAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS---QEQKRLL 80
Query: 557 LIAKLQHRNL-----VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG 611
               +  R +     V   G    +G+ + I   + + SLD F      K     +  +G
Sbjct: 81  XDLDISXRTVDCPFTVTFYGALFREGD-VWICXELXDTSLDKFYKQVIDKGQTIPEDILG 139
Query: 612 -IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
            I   I + L +LH  S+  +IHRD+K SNVL++     K  DFG++
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKL 561
           ++ + +   +G G FG     RL+    + E VAVK +  + G+ ++E  K E++    L
Sbjct: 17  SDRYELVKDIGSGNFG---VARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSL 71
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N+VR     +      +++EY     L  F       R    +AR    + +  G+ 
Sbjct: 72  RHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARF-FFQQLISGVS 128
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNP--KISDFGLARMFGGDELQGNTKRIVGT 675
           Y H     ++ HRDLK  N LLD    P  KI DFG ++      L    K  VGT
Sbjct: 129 YCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGT 178

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKLQHRNLVRILGCC 573
           +G G FG     R  L  E VAVK +  + G  ++E  + E++    L+H N+VR     
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYI--ERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
           +      +I+EY     L   + +    R    +AR    + +  G+ Y H     +I H
Sbjct: 86  LTPTHLAIIMEYASGGELYERICN--AGRFSEDEARF-FFQQLLSGVSYCH---SMQICH 139
Query: 634 RDLKASNVLLDRDMNP--KISDFGLARMFGGDELQGNTKRIVGT 675
           RDLK  N LLD    P  KI DFG ++      L    K  VGT
Sbjct: 140 RDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGT 180

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 595 LFD-PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISD 653
           LFD  T+K  L  +    I+  + + +  LH   +  I+HRDLK  N+LLD DMN K++D
Sbjct: 111 LFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 167
Query: 654 FGLA 657
           FG +
Sbjct: 168 FGFS 171

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 595 LFD-PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISD 653
           LFD  T+K  L  +    I+  + + +  LH   +  I+HRDLK  N+LLD DMN K++D
Sbjct: 111 LFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 167
Query: 654 FGLA 657
           FG +
Sbjct: 168 FGFS 171

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 595 LFD-PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISD 653
           LFD  T+K  L  +    I+  + + +  LH   +  I+HRDLK  N+LLD DMN K++D
Sbjct: 98  LFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTD 154
Query: 654 FGLA 657
           FG +
Sbjct: 155 FGFS 158

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCC 573
           L EGGF  VY+ + + +G E A+KRL S   +       E+  + KL  H N+V+     
Sbjct: 36  LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 574 --------IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
                     Q E +L+ E    + ++ FL     +  L     + I     + + ++H 
Sbjct: 96  SIGKEESDTGQAEFLLLTELCKGQLVE-FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             +  IIHRDLK  N+LL      K+ DFG A
Sbjct: 155 -QKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 505 AATENFSMECKLGEGGFGPVYKGRLLNGEE-VAVKRLSSQSGQGLEEFKNEMLLIAKLQH 563
           A ++ F +E +LG G    VY+ +    ++  A+K L     + +   + E+ ++ +L H
Sbjct: 50  ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSH 107
Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLY 622
            N++++        E  L+LE +    L    FD   +K     +     ++ I + + Y
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAADAVKQILEAVAY 163
Query: 623 LHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           LH      I+HRDLK  N+L      D   KI+DFGL+++    E Q   K + GT
Sbjct: 164 LHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGT 213

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 503 VAAATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIA 559
           V   + +F ++  LGEG +G V        GE VA+K++    +    L   + E+ ++ 
Sbjct: 6   VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 560 KLQHRNLVRILGC----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
             +H N++ I         E   ++ I++ +    L   +      ++L        I  
Sbjct: 65  HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI----STQMLSDDHIQYFIYQ 120
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             + +  LH  +   +IHRDLK SN+L++ + + K+ DFGLAR+ 
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 503 VAAATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIA 559
           V   + +F ++  LGEG +G V        GE VA+K++    +    L   + E+ ++ 
Sbjct: 6   VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 560 KLQHRNLVRILGC----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
             +H N++ I         E   ++ I++ +    L   +      ++L        I  
Sbjct: 65  HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI----STQMLSDDHIQYFIYQ 120
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             + +  LH  +   +IHRDLK SN+L++ + + K+ DFGLAR+ 
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 503 VAAATENFSMECKLGEGGFGPVYKG-RLLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIA 559
           V   + +F ++  LGEG +G V        GE VA+K++    +    L   + E+ ++ 
Sbjct: 6   VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 560 KLQHRNLVRILGC----CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
             +H N++ I         E   ++ I++ +    L   +      ++L        I  
Sbjct: 65  HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI----STQMLSDDHIQYFIYQ 120
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
             + +  LH  +   +IHRDLK SN+L++ + + K+ DFGLAR+ 
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Query: 509 NFSMECKLGEGGFGPVY------KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
           +FS+   +G GGFG VY       G++   + +  KR+  + G+ L   +  ML +    
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 563 HRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGI 616
               +  +       +K+  IL+ M    L   L     F     R    +  +G+    
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL---- 304
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
                  H ++RF +++RDLK +N+LLD   + +ISD GLA
Sbjct: 305 ------EHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA 338

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Query: 509 NFSMECKLGEGGFGPVY------KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
           +FS+   +G GGFG VY       G++   + +  KR+  + G+ L   +  ML +    
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 563 HRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGI 616
               +  +       +K+  IL+ M    L   L     F     R    +  +G+    
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL---- 305
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
                  H ++RF +++RDLK +N+LLD   + +ISD GLA
Sbjct: 306 ------EHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA 339

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Query: 509 NFSMECKLGEGGFGPVY------KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
           +FS+   +G GGFG VY       G++   + +  KR+  + G+ L   +  ML +    
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 563 HRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGI 616
               +  +       +K+  IL+ M    L   L     F     R    +  +G+    
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL---- 305
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
                  H ++RF +++RDLK +N+LLD   + +ISD GLA
Sbjct: 306 ------EHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA 339

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L+E +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY P   +   L      R +G  +        
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFSEPHARFYA 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+++D+    +++DFGLA+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----RVKGRTWXLCGT 201

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Query: 509 NFSMECKLGEGGFGPVY------KGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
           +FS+   +G GGFG VY       G++   + +  KR+  + G+ L   +  ML +    
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 563 HRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGI 616
               +  +       +K+  IL+ M    L   L     F     R    +  +G+    
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL---- 305
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
                  H ++RF +++RDLK +N+LLD   + +ISD GLA
Sbjct: 306 ------EHMHNRF-VVYRDLKPANILLDEHGHVRISDLGLA 339

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSS--QSGQGLEEFKNEMLLIAKLQHR 564
           + + +   +G G +G V +    L    VA+K++    +     +    E+ ++ +L H 
Sbjct: 53  DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 565 NLVRILGCCI----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           ++V++L   I    E+ +++ ++  + +         P     L  +    ++  +  G+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKT---LLYNLLVGV 169
Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTK 670
            Y+H      I+HRDLK +N L+++D + K+ DFGLAR     E  GN++
Sbjct: 170 KYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE-NGNSQ 215

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 534 EVAVKRLSSQSGQGLEEF-KNEMLLIAKLQ-HRNLVRILGCCIEQGEKILILEYMPNKSL 591
           EV  +RLS +  + + E  + E  ++ ++  H +++ ++          L+ + M    L
Sbjct: 128 EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL 187
Query: 592 DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI 651
             +L   T+K  L  +    I+  + + + +LH  +   I+HRDLK  N+LLD +M  ++
Sbjct: 188 FDYL---TEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRL 241
Query: 652 SDFGLA 657
           SDFG +
Sbjct: 242 SDFGFS 247

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILG 571
            KL E   G ++KGR   G ++ VK L  +  S +   +F  E   +    H N++ +LG
Sbjct: 16  TKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 572 CC--IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
            C         LI  +MP  SL   L + T   +   QA +     +A+G+ +LH     
Sbjct: 75  ACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQA-VKFALDMARGMAFLHTLEPL 133
Query: 630 RIIHRDLKASNVLLDRDMNPKIS 652
            I    L + +V++D DM  +IS
Sbjct: 134 -IPRHALNSRSVMIDEDMTARIS 155

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     +G G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY+P   +   L      R +G  +        
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYA 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    K++DFG A+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----RVKGRTWXLCGT 201

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEV----AVKRLSSQSGQGLEEFKNEML 556
           AS +   ++F +   +G G +  V   RL   + +     VK+      + ++  + E  
Sbjct: 13  ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH 72
Query: 557 LIAKLQ-HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
           +  +   H  LV +  C   +     ++EY+    L   +F   ++R L  +        
Sbjct: 73  VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE 129
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           I+  L YLH      II+RDLK  NVLLD + + K++D+G+ +
Sbjct: 130 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 169

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCC 573
           LGEG    V     L+  +E AVK +  Q G        E+ ++ + Q HRN++ ++   
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
            E+    L+ E M   S+   L    K+R         +++ +A  L +LH+     I H
Sbjct: 81  EEEDRFYLVFEKMRGGSI---LSHIHKRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 634 RDLKASNVLLDR--DMNP-KISDFGLARMFGGDELQGNTKRI 672
           RDLK  N+L +    ++P KI DFGL     G +L G+   I
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLG---SGIKLNGDCSPI 173

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 11/163 (6%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEV----AVKRLSSQSGQGLEEFKNEML 556
           AS +   ++F +   +G G +  V   RL   + +     VK+      + ++  + E  
Sbjct: 45  ASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH 104
Query: 557 LIAKLQ-HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
           +  +   H  LV +  C   +     ++EY+    L   +F   ++R L  +        
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE 161
Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           I+  L YLH      II+RDLK  NVLLD + + K++D+G+ +
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK 201

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 20  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 79
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY+P   +   L      R +G  +        
Sbjct: 80  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYA 133
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + GT
Sbjct: 134 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGT 187

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 35  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY+P   +   L      R +G  +        
Sbjct: 95  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYA 148
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGT 202

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY+P   +   L      R +G  +        
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYA 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY+P   +   L      R +G  +        
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYA 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY+P   +   L      R +G  +        
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYA 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 35  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY+P   +   L      R +G  +        
Sbjct: 95  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYA 148
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 202

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY P   +   L      R +G  +        
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFSEPHARFYA 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+++D+    K++DFG A+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 201

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKK--RLLGWQARIGIIE 614
           ++  +    LV++     +     +++EY+P   +    F   ++  R     AR     
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYA-- 147
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVG 674
             AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + G
Sbjct: 148 --AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 675 T 675
           T
Sbjct: 201 T 201

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 35  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKK--RLLGWQARIGIIE 614
           ++  +    LV++     +     +++EY+P   +    F   ++  R     AR     
Sbjct: 95  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYA-- 148
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVG 674
             AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + G
Sbjct: 149 --AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 201
Query: 675 T 675
           T
Sbjct: 202 T 202

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 19/181 (10%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKK--RLLGWQARIGIIE 614
           ++  +    LV++     +     +++EY+P   +    F   ++  R     AR     
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYA-- 147
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVG 674
             AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + G
Sbjct: 148 --AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCG 200
Query: 675 T 675
           T
Sbjct: 201 T 201

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 19/181 (10%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKK--RLLGWQARIGIIE 614
           ++  +    LV++     +     +++EY P   +    F   ++  R     AR     
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYA-- 147
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVG 674
             AQ +L   +     +I+RDLK  N+++D+    K++DFG A+      ++G T  + G
Sbjct: 148 --AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCG 200
Query: 675 T 675
           T
Sbjct: 201 T 201

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 502 SVAAATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKNEML---- 556
            +    E+F +   LG+G FG V+        +  A+K L        ++ +  M+    
Sbjct: 12  QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 557 LIAKLQHRNLVRILGCCIEQGEKIL-ILEYMPNKSLDVFL-----FDPTKKRLLGWQARI 610
           L    +H  L  +  C  +  E +  ++EY+    L   +     FD ++      +   
Sbjct: 72  LSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAE--- 127
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                I  GL +LH      I++RDLK  N+LLD+D + KI+DFG+ +
Sbjct: 128 -----IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 167

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 489 KSKDSWLPLF-SLASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQ 546
           K+K+ +L  + S A   A  + F     LG G FG V   +    G   A+K L  Q   
Sbjct: 14  KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 73
Query: 547 GLEEFK---NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL 603
            L++ +   NE  ++  +    LV++     +     +++EY+P   +   L      R 
Sbjct: 74  KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RR 127
Query: 604 LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +G  +        AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+     
Sbjct: 128 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 182
Query: 664 ELQGNTKRIVGT 675
            ++G T  + GT
Sbjct: 183 RVKGRTWXLCGT 194

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 25/183 (13%)
Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLE---EFKNEMLLIAKLQ 562
           ++ + +   LG GG   V+  R L +  +VAVK L +   +       F+ E    A L 
Sbjct: 11  SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 563 HRNLVRILGCCIEQGEK--------ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE 614
           H  +V +     + GE          +++EY+   +L   +   T+  +   +A I +I 
Sbjct: 71  HPAIVAVY----DTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRA-IEVIA 123
Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG--GDELQGNTKRI 672
              Q L + H      IIHRD+K +N+L+      K+ DFG+AR     G+ +   T  +
Sbjct: 124 DACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVX-QTAAV 179
Query: 673 VGT 675
           +GT
Sbjct: 180 IGT 182

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGL 548
           S+D   P  +L  V     NF M   LG+G FG V        EE+ A+K L        
Sbjct: 3   SEDRKQPSNNLDRVKLTDFNFLM--VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQD 60
Query: 549 EEFKNEML---LIAKLQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTK---K 601
           ++ +  M+   ++A L     +  L  C +  +++  ++EY+    L   +    K    
Sbjct: 61  DDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP 120
Query: 602 RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           + + + A I I      GL +LH      II+RDLK  NV+LD + + KI+DFG+ +
Sbjct: 121 QAVFYAAEISI------GLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 168

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 20/194 (10%)
Query: 489 KSKDSWLPLF-SLASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQ 546
           K+K+ +L  + S A   A  + F     LG G FG V   +    G   A+K L  Q   
Sbjct: 14  KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 73
Query: 547 GLEEFK---NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKK-- 601
            L++ +   NE  ++  +    LV++     +     +++EY+P   +    F   ++  
Sbjct: 74  KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIG 129
Query: 602 RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           R     AR       AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+   
Sbjct: 130 RFXEPHARFYA----AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK--- 182
Query: 662 GDELQGNTKRIVGT 675
              ++G T  + GT
Sbjct: 183 --RVKGRTWXLCGT 194

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 21/176 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKL 561
           ++ + +   +G G FG     RL+    + E VAVK +  + G+ ++E  K E++    L
Sbjct: 18  SDRYELVKDIGSGNFG---VARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSL 72
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N+VR     +      +++EY     L  F       R    +AR    + +  G+ 
Sbjct: 73  RHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARF-FFQQLISGVS 129
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNP--KISDFGLARMFGGDELQGNTKRIVGT 675
           Y H     ++ HRDLK  N LLD    P  KI  FG ++      L    K  VGT
Sbjct: 130 YCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGT 179

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 502 SVAAATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKNEML---- 556
            +    E+F +   LG+G FG V+        +  A+K L        ++ +  M+    
Sbjct: 11  QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 557 LIAKLQHRNLVRILGCCIEQGEKIL-ILEYMPNKSLDVFL-----FDPTKKRLLGWQARI 610
           L    +H  L  +  C  +  E +  ++EY+    L   +     FD ++      +   
Sbjct: 71  LSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAE--- 126
Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                I  GL +LH      I++RDLK  N+LLD+D + KI+DFG+ +
Sbjct: 127 -----IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 166

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 21/176 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKL 561
           ++ + +   +G G FG     RL+    + E VAVK +  + G+ +    K E++    L
Sbjct: 18  SDRYELVKDIGSGNFG---VARLMRDKQSNELVAVKYI--ERGEKIAANVKREIINHRSL 72
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N+VR     +      +++EY     L  F       R    +AR    + +  G+ 
Sbjct: 73  RHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARF-FFQQLISGVS 129
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNP--KISDFGLARMFGGDELQGNTKRIVGT 675
           Y H     ++ HRDLK  N LLD    P  KI DFG ++      L    K  VGT
Sbjct: 130 YCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGT 179

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 489 KSKDSWLPLF-SLASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQ 546
           K+K+ +L  + S A   A  + F     LG G FG V   +    G   A+K L  Q   
Sbjct: 22  KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 81
Query: 547 GLEEFK---NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL 603
            L++ +   NE  ++  +    LV++     +     +++EY+P   +   L      R 
Sbjct: 82  KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RR 135
Query: 604 LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +G  +        AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+     
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 664 ELQGNTKRIVGT 675
            ++G T  + GT
Sbjct: 191 RVKGRTWXLCGT 202

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 489 KSKDSWLPLF-SLASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQ 546
           K+K+ +L  + S A   A  + F     LG G FG V   +    G   A+K L  Q   
Sbjct: 22  KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 81
Query: 547 GLEEFK---NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL 603
            L++ +   NE  ++  +    LV++     +     +++EY+P   +   L      R 
Sbjct: 82  KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RR 135
Query: 604 LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +G  +        AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+     
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 664 ELQGNTKRIVGT 675
            ++G T  + GT
Sbjct: 191 RVKGRTWXLCGT 202

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 489 KSKDSWLPLF-SLASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQ 546
           K+K+ +L  + S A   A  + F     LG G FG V   +    G   A+K L  Q   
Sbjct: 22  KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 81
Query: 547 GLEEFK---NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL 603
            L++ +   NE  ++  +    LV++     +     +++EY+P   +   L      R 
Sbjct: 82  KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RR 135
Query: 604 LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +G  +        AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+     
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 190
Query: 664 ELQGNTKRIVGT 675
            ++G T  + GT
Sbjct: 191 RVKGRTWXLCGT 202

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 577 GEKILILEYMPNKSLDVF-LFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRD 635
            E ILILEY      ++F L  P    ++     I +I+ I +G+ YLH  +   I+H D
Sbjct: 102 SEIILILEYAAGG--EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLD 156
Query: 636 LKASNVLLDRDM---NPKISDFGLARMFG 661
           LK  N+LL       + KI DFG++R  G
Sbjct: 157 LKPQNILLSSIYPLGDIKIVDFGMSRKIG 185

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 21/176 (11%)
Query: 507 TENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKL 561
           ++ + +   +G G FG     RL+    + E VAVK +  + G+ ++E  K E++    L
Sbjct: 18  SDRYELVKDIGSGNFG---VARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSL 72
Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           +H N+VR     +      +++EY     L  F       R    +AR    + +  G+ 
Sbjct: 73  RHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARF-FFQQLISGVS 129
Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNP--KISDFGLARMFGGDELQGNTKRIVGT 675
           Y H     ++ HRDLK  N LLD    P  KI  FG ++      L    K  VGT
Sbjct: 130 YCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGT 179

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 16/192 (8%)
Query: 489 KSKDSWLPLF-SLASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQ 546
           K+K+ +L  + S A   A  + F     LG G FG V   +    G   A+K L  Q   
Sbjct: 22  KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 81
Query: 547 GLEEFK---NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL 603
            L++ +   NE  ++  +    LV++     +     +++EY P   +   L      R 
Sbjct: 82  KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL------RR 135
Query: 604 LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +G  +        AQ +L   +     +I+RDLK  N+++D+    K++DFG A+     
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----- 190
Query: 664 ELQGNTKRIVGT 675
            ++G T  + GT
Sbjct: 191 RVKGRTWXLCGT 202

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLE---EFKNEMLLIAKLQHRNLVRILG 571
           LG GG   V+  R L +  +VAVK L +   +       F+ E    A L H  +V +  
Sbjct: 20  LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY- 78
Query: 572 CCIEQGEK--------ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
              + GE          +++EY+   +L   +   T+  +   +A I +I    Q L + 
Sbjct: 79  ---DTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRA-IEVIADACQALNFS 132
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG--GDELQGNTKRIVGT 675
           H      IIHRD+K +N+++      K+ DFG+AR     G+ +   T  ++GT
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT-QTAAVIGT 182

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 489 KSKDSWLPLF-SLASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQ 546
           K+K+ +L  + S A   A  + F     LG G FG V   +    G   A+K L  Q   
Sbjct: 42  KAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 101
Query: 547 GLEEFK---NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL 603
            L++ +   NE  ++  +    LV++     +     +++EY+P   +   L      R 
Sbjct: 102 KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL------RR 155
Query: 604 LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +G  +        AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+     
Sbjct: 156 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----- 210
Query: 664 ELQGNTKRIVGT 675
            ++G T  + GT
Sbjct: 211 RVKGRTWXLCGT 222

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY P   +   L      R +G  +        
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFSEPHARFYA 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+++D+    +++DFG A+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 11/154 (7%)
Query: 508 ENFSMECKLGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRN 565
           ++F    +LG G  G V+K     +G  +A K +  +    +  +   E+ ++ +     
Sbjct: 68  DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTK--KRLLGWQARIGIIEGIAQGLLYL 623
           +V   G     GE  + +E+M   SLD  L    +  +++LG +  I +I    +GL YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVI----KGLTYL 182
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
               + +I+HRD+K SN+L++     K+ DFG++
Sbjct: 183 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 11/147 (7%)
Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCC 573
           LGEG +  V     L NG+E AVK +  Q+G        E+  + + Q ++N++ ++   
Sbjct: 21  LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIH 633
            +     L+ E +   S+   L    K++    +    ++  +A  L +LH      I H
Sbjct: 81  EDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVRDVAAALDFLHTKG---IAH 134
Query: 634 RDLKASNVLLD--RDMNP-KISDFGLA 657
           RDLK  N+L +    ++P KI DF L 
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLG 161

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   +    G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY+P   +   L      R +G  +        
Sbjct: 94  ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYA 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLE---EFKNEMLLIAKLQHRNLVRILG 571
           LG GG   V+  R L +  +VAVK L +   +       F+ E    A L H  +V +  
Sbjct: 20  LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY- 78
Query: 572 CCIEQGEK--------ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
              + GE          +++EY+   +L   +   T+  +   +A I +I    Q L + 
Sbjct: 79  ---DTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRA-IEVIADACQALNFS 132
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG--GDELQGNTKRIVGT 675
           H      IIHRD+K +N+++      K+ DFG+AR     G+ +   T  ++GT
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT-QTAAVIGT 182

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   +    G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY+P   +   L      R +G  +        
Sbjct: 94  ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYA 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   +    G   A+K L  Q    L++ +   NE  
Sbjct: 34  AQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    LV++     +     +++EY+P   +   L      R +G  +        
Sbjct: 94  ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL------RRIGRFSEPHARFYA 147
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+L+D+    +++DFG A+      ++G T  + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWXLCGT 201

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 35  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    L ++     +     +++EY P   +   L      R +G  +        
Sbjct: 95  ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFSEPHARFYA 148
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+++D+    K++DFG A+      ++G T  + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 202

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 516 LGEGGFGPVYKGRLLNGEEVAVKRLSSQSG-------QGLEEFKNEMLLIAKLQHRNLVR 568
           LGEG +G V +  +L+ E +  + +             G    K E+ L+ +L+H+N+++
Sbjct: 13  LGEGSYGKVKE--VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 569 ILGCCI--EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           ++      E+ +  +++EY     +   L    +KR    QA  G    +  GL YLH  
Sbjct: 71  LVDVLYNEEKQKMYMVMEYC-VCGMQEMLDSVPEKRFPVCQAH-GYFCQLIDGLEYLHSQ 128
Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
               I+H+D+K  N+LL      KIS  G+A
Sbjct: 129 G---IVHKDIKPGNLLLTTGGTLKISALGVA 156

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 16/192 (8%)
Query: 489 KSKDSWLPLF-SLASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQ 546
           K+K+ +L  + S A   A  + F     LG G FG V   +    G   A+K L  Q   
Sbjct: 22  KAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVV 81
Query: 547 GLEEFK---NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL 603
            L++ +   NE  +   +    LV++     +     ++LEY P   +   L      R 
Sbjct: 82  KLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL------RR 135
Query: 604 LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           +G  +        AQ +L   +     +I+RDLK  N+L+D+    K++DFG A+     
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAK----- 190
Query: 664 ELQGNTKRIVGT 675
            ++G T  + GT
Sbjct: 191 RVKGRTWXLCGT 202

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 516 LGEGGFGPVYKGRLLN---GEEVAVK-----RLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +G+G F  V   R +N   G++ AVK     + +S  G   E+ K E  +   L+H ++V
Sbjct: 32  IGKGPFSVVR--RCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI----IEGIAQGLLYL 623
            +L      G   ++ E+M    L    F+  K+   G+     +    +  I + L Y 
Sbjct: 90  ELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNP---KISDFGLARMFGGDELQGNTKRIVGT 675
           H  +   IIHRD+K   VLL    N    K+  FG+A   G   L    +  VGT
Sbjct: 147 HDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR--VGT 196

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 15/179 (8%)
Query: 501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFK---NEML 556
           A   A  + F     LG G FG V   + +  G   A+K L  Q    L++ +   NE  
Sbjct: 35  AQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           ++  +    L ++     +     +++EY P   +   L      R +G  +        
Sbjct: 95  ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHL------RRIGRFSEPHARFYA 148
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           AQ +L   +     +I+RDLK  N+++D+    K++DFG A+      ++G T  + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----RVKGRTWXLCGT 202

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 85/197 (43%), Gaps = 26/197 (13%)
Query: 495 LPLFSLASVAAATENFSMECK-LGEGGFGPVYKGRLLN---GEEVAVK-----RLSSQSG 545
           +P  S+A      E+    C+ +G+G F  V   R +N   G++ AVK     + +S  G
Sbjct: 12  VPRGSMADDDVLFEDVYELCEVIGKGPFSVVR--RCINRETGQQFAVKIVDVAKFTSSPG 69
Query: 546 QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLG 605
              E+ K E  +   L+H ++V +L      G   ++ E+M    L    F+  K+   G
Sbjct: 70  LSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAG 126
Query: 606 WQARIGI----IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP---KISDFGLAR 658
           +     +    +  I + L Y H  +   IIHRD+K   VLL    N    K+  FG+A 
Sbjct: 127 FVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAI 183
Query: 659 MFGGDELQGNTKRIVGT 675
             G   L    +  VGT
Sbjct: 184 QLGESGLVAGGR--VGT 198

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 17/163 (10%)
Query: 502 SVAAATENFSMECKLGEGGFGPVY--KGRLLNG--EEVAVKRLSSQSGQGLEEFKNEMLL 557
           +V   +  F +E K+GEG F  VY    +L  G  E++A+K L   S       + + L 
Sbjct: 15  AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLT 74
Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKS-LDVFLFDPTKKRLLGWQARIGIIEGI 616
           +A  Q  N++ +  C  +    ++ + Y+ ++S LD+          L +Q     +  +
Sbjct: 75  VAGGQD-NVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-------NSLSFQEVREYMLNL 126
Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP-KISDFGLAR 658
            + L  +H   +F I+HRD+K SN L +R +    + DFGLA+
Sbjct: 127 FKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 508 ENFSMECKLGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRN 565
           ++F    +LG G  G V+K     +G  +A K +  +    +  +   E+ ++ +     
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTK--KRLLGWQARIGIIEGIAQGLLYL 623
           +V   G     GE  + +E+M   SLD  L    +  +++LG +  I +I    +GL YL
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVI----KGLTYL 120
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
               + +I+HRD+K SN+L++     K+ DFG++    G  +       VGT
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFKN------EMLLIAKLQ----HR 564
           LG+GGFG V+ G RL +  +VA+K +      G     +      E+ L+ K+     H 
Sbjct: 39  LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
            ++R+L     Q   +L+LE  P  + D+F +   K  L    +R    + +A     + 
Sbjct: 99  GVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA----IQ 153
Query: 625 HYSRFRIIHRDLKASNVLLD-RDMNPKISDFG 655
           H     ++HRD+K  N+L+D R    K+ DFG
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFKN------EMLLIAKLQ--HRNL 566
           LG GGFG VY G R+ +   VA+K +         E  N      E++L+ K+      +
Sbjct: 12  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           +R+L         +LILE  P    D+F F   +  L    AR        Q L  + H 
Sbjct: 72  IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR----SFFWQVLEAVRHC 126
Query: 627 SRFRIIHRDLKASNVLLDRDMNP-KISDFG 655
               ++HRD+K  N+L+D +    K+ DFG
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDFG 156

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFKN------EMLLIAKLQ--HRNL 566
           LG GGFG VY G R+ +   VA+K +         E  N      E++L+ K+      +
Sbjct: 17  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           +R+L         +LILE  P    D+F F   +  L    AR        Q L  + H 
Sbjct: 77  IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR----SFFWQVLEAVRHC 131
Query: 627 SRFRIIHRDLKASNVLLDRDMNP-KISDFG 655
               ++HRD+K  N+L+D +    K+ DFG
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDFG 161

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 508 ENFSMECKLGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRN 565
           ++F    +LG G  G V+K     +G  +A K +  +    +  +   E+ ++ +     
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTK--KRLLGWQARIGIIEGIAQGLLYL 623
           +V   G     GE  + +E+M   SLD  L    +  +++LG +  I +I    +GL YL
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVI----KGLTYL 120
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
               + +I+HRD+K SN+L++     K+ DFG++    G  +       VGT
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 15/172 (8%)
Query: 508 ENFSMECKLGEGGFGPVYK-GRLLNGEEVAVKRLSSQSGQGLE-EFKNEMLLIAKLQHRN 565
           ++F    +LG G  G V+K     +G  +A K +  +    +  +   E+ ++ +     
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTK--KRLLGWQARIGIIEGIAQGLLYL 623
           +V   G     GE  + +E+M   SLD  L    +  +++LG +  I +I    +GL YL
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-KVSIAVI----KGLTYL 120
Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
               + +I+HRD+K SN+L++     K+ DFG++    G  +       VGT
Sbjct: 121 R--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 516 LGEGGFGPVYKG-RLLNGEEVAVKRLSSQSGQGLEEFKN------EMLLIAKLQ--HRNL 566
           LG GGFG VY G R+ +   VA+K +         E  N      E++L+ K+      +
Sbjct: 31  LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           +R+L         +LILE  P    D+F F   +  L    AR        Q L  + H 
Sbjct: 91  IRLLDWFERPDSFVLILE-RPEPVQDLFDFITERGALQEELAR----SFFWQVLEAVRHC 145
Query: 627 SRFRIIHRDLKASNVLLDRDMNP-KISDFG 655
               ++HRD+K  N+L+D +    K+ DFG
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDFG 175

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	675
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-88
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	9e-85
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-76
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-61
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-53
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-46
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-44
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	8e-43
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-42
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-42
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-42
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-42
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-40
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-39
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-38
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-38
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-38
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	7e-37
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-36
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-36
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-36
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-36
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-36
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	9e-36
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-35
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	5e-35
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-35
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-35
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-34
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-34
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-34
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-34
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	6e-34
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-34
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-34
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	7e-34
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-33
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-33
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-33
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-33
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-33
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-33
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-33
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-33
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-33
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-33
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-33
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	7e-33
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	8e-33
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-32
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-32
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-32
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-32
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-32
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	4e-32
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-32
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	9e-32
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-31
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-31
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	2e-31
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-31
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-31
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-31
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-31
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-31
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	8e-31
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-30
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-30
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-30
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-30
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-30
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	7e-30
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	8e-30
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-29
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-29
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-29
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-29
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-29
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-29
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-29
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-29
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	6e-29
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-28
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-28
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-28
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-28
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	6e-28
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	8e-28
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-27
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-27
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	6e-27
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-27
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-26
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-26
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-26
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-26
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	6e-26
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-26
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-26
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-26
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-26
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	9e-26
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-25
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	4e-25
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	5e-25
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	6e-25
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-25
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	6e-25
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	9e-25
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-24
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-24
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-24
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-24
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-24
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	6e-24
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	7e-24
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	8e-24
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-23
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	1e-23
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-23
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-23
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-23
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-23
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	3e-23
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-23
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	6e-23
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-23
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	7e-23
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	7e-23
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	7e-23
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-22
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-22
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-22
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-22
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-22
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-22
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-21
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-21
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-21
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-21
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-21
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-21
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-21
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-21
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	3e-21
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-21
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	6e-21
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-21
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-20
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-20
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-20
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-20
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-20
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-20
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-20
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-20
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-20
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-20
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-20
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	9e-20
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-20
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-19
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-19
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-19
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-19
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-19
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-19
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-19
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	4e-19
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-19
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-19
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	9e-19
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-18
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	5e-18
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	8e-18
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-17
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	3e-17
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-17
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	5e-17
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-16
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	5e-16
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	5e-16
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-15
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-15
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	7e-15
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	9e-15
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	9e-15
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	9e-15
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-14
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-14
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	9e-14
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-13
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-13
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-13
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	5e-13
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	6e-13
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	1e-12
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-12
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-12
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-12
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-12
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-08
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-12
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	3e-12
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	3e-12
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-12
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-12
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-12
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	7e-12
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	7e-12
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	1e-11
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-11
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-11
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-11
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	2e-11
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	3e-05
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	3e-11
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-11
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	6e-11
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	7e-11
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	2e-10
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	3e-10
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	4e-10
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	5e-08
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-10
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	7e-10
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	7e-10
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-09
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	3e-09
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	6e-09
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	2e-06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	7e-09
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-09
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	9e-09
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-08
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-08
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-08
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-08
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	2e-08
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-08
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-08
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	3e-07
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	6e-05
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	9e-07
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	6e-06
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	1e-05
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	7e-06
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	7e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	7e-06
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	8e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-06

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  276 bits (709), Expect = 4e-88
 Identities = 75/201 (37%), Positives = 103/201 (51%), Gaps = 14/201 (6%)

Query: 485 DRRDKSKDSWLPLFSLASVAAATENFSMEC------KLGEGGFGPVYKGRLLNGEEVAVK 538
           ++  +  D+    FS   +   T NF          K+GEGGFG VYKG + N   VAVK
Sbjct: 2   NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVK 60

Query: 539 RLSS----QSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVF 594
           +L++     + +  ++F  E+ ++AK QH NLV +LG   +  +  L+  YMPN SL   
Sbjct: 61  KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR 120

Query: 595 LFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDF 654
           L        L W  R  I +G A G+ +LH       IHRD+K++N+LLD     KISDF
Sbjct: 121 LSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDF 177

Query: 655 GLARMFGGDELQGNTKRIVGT 675
           GLAR          T RIVGT
Sbjct: 178 GLARASEKFAQTVMTSRIVGT 198

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  268 bits (688), Expect = 9e-85
 Identities = 77/184 (41%), Positives = 110/184 (59%), Gaps = 3/184 (1%)

Query: 494 WLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLE-EFK 552
            L  FSL  +  A++NFS +  LG GGFG VYKGRL +G  VAVKRL  +  QG E +F+
Sbjct: 16  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQ 75

Query: 553 NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL-LGWQARIG 611
            E+ +I+   HRNL+R+ G C+   E++L+  YM N S+   L +  + +  L W  R  
Sbjct: 76  TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135

Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
           I  G A+GL YLH +   +IIHRD+KA+N+LLD +    + DFGLA++    +    T  
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-A 194

Query: 672 IVGT 675
           + GT
Sbjct: 195 VRGT 198

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  246 bits (631), Expect = 2e-76
 Identities = 69/179 (38%), Positives = 107/179 (59%), Gaps = 4/179 (2%)

Query: 498 FSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLL 557
             L  +  AT NF  +  +G G FG VYKG L +G +VA+KR + +S QG+EEF+ E+  
Sbjct: 29  VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88

Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL-LGWQARIGIIEGI 616
           ++  +H +LV ++G C E+ E ILI +YM N +L   L+      + + W+ R+ I  G 
Sbjct: 89  LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           A+GL YLH  +   IIHRD+K+ N+LLD +  PKI+DFG+++     +    +  + GT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGT 204

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  206 bits (527), Expect = 2e-61
 Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 17/189 (8%)

Query: 498 FSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLL 557
               ++   +    +      G FG V+K +L   E VAVK    Q  Q   + + E+  
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQS-WQNEYEVYS 71

Query: 558 IAKLQHRNLVRILGCCIE----QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII 613
           +  ++H N+++ +G          +  LI  +    SL  FL    K  ++ W     I 
Sbjct: 72  LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIA 127

Query: 614 EGIAQGLLYLHH-------YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
           E +A+GL YLH          +  I HRD+K+ NVLL  ++   I+DFGLA  F   +  
Sbjct: 128 ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA 187

Query: 667 GNTKRIVGT 675
           G+T   VGT
Sbjct: 188 GDTHGQVGT 196

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  185 bits (470), Expect = 4e-53
 Identities = 56/197 (28%), Positives = 85/197 (43%), Gaps = 27/197 (13%)

Query: 498 FSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNE--M 555
            + +  +   +N  +   +G G +G VYKG L +   VAVK  S  + Q    F NE  +
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNI 58

Query: 556 LLIAKLQHRNLVRILGCCIE-----QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI 610
             +  ++H N+ R +          + E +L++EY PN SL  +L          W +  
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSC 114

Query: 611 GIIEGIAQGLLYLH------HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG-- 662
            +   + +GL YLH       + +  I HRDL + NVL+  D    ISDFGL+    G  
Sbjct: 115 RLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNR 174

Query: 663 ----DELQGNTKRIVGT 675
                E        VGT
Sbjct: 175 LVRPGEEDNAAISEVGT 191

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  166 bits (423), Expect = 1e-46
 Identities = 51/170 (30%), Positives = 91/170 (53%), Gaps = 6/170 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRN 565
            + +++ K+G G FG V++    +G +VAVK L  Q    + + EF  E+ ++ +L+H N
Sbjct: 37  CDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V  +G   +     ++ EY+   SL   L     +  L  + R+ +   +A+G+ YLH+
Sbjct: 96  IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
                I+HR+LK+ N+L+D+    K+ DFGL+R+     L   +K   GT
Sbjct: 156 -RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGT 202

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  159 bits (405), Expect = 3e-44
 Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 11/169 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +   +E  +G G FG V K +    ++VA+K++ S+S    + F  E+  ++++ H N+V
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIV 64

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++ G C+      L++EY    SL   L              +      +QG+ YLH   
Sbjct: 65  KLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122

Query: 628 RFRIIHRDLKASNVLLDRDMN-PKISDFGLARMFGGDELQGNTKRIVGT 675
              +IHRDLK  N+LL       KI DFG A      ++Q +     G+
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-----DIQTHMTNNKGS 166

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  155 bits (393), Expect = 8e-43
 Identities = 48/181 (26%), Positives = 91/181 (50%), Gaps = 23/181 (12%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQG-------LEEFKNEMLLIA 559
                E ++G+GGFG V+KGRL+ +   VA+K L     +G        +EF+ E+ +++
Sbjct: 19  NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78

Query: 560 KLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
            L H N+V++ G         +++E++P   L   L D  K   + W  ++ ++  IA G
Sbjct: 79  NLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALG 134

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLD-----RDMNPKISDFGLARMFGGDELQGNTKRIVG 674
           + Y+ +     I+HRDL++ N+ L        +  K++DFGL++     +   +   ++G
Sbjct: 135 IEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLG 188

Query: 675 T 675
            
Sbjct: 189 N 189

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  155 bits (394), Expect = 1e-42
 Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 6/165 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
            +      LG+G FG   K      GE + +K L     +    F  E+ ++  L+H N+
Sbjct: 10  SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69

Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           ++ +G   +      I EY+   +L   +     +    W  R+   + IA G+ YLH  
Sbjct: 70  LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQ--YPWSQRVSFAKDIASGMAYLH-- 125

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
               IIHRDL + N L+  + N  ++DFGLAR+   ++ Q    R
Sbjct: 126 -SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  153 bits (390), Expect = 2e-42
 Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 7/157 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRN 565
           +  +   KL E   G ++KGR   G ++ VK L  +  S +   +F  E   +    H N
Sbjct: 10  KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68

Query: 566 LVRILGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
           ++ +LG C          I  +MP  SL   L + T   +      +     +A+G+ +L
Sbjct: 69  VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVV-DQSQAVKFALDMARGMAFL 127

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
           H      I    L + +V++D DM  +IS   +   F
Sbjct: 128 HT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  153 bits (389), Expect = 2e-42
 Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 17/174 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRL----SSQSGQGLEEFKNEMLLIAKLQH 563
              ++E  +G GGFG VY+     G+EVAVK           Q +E  + E  L A L+H
Sbjct: 7   AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++ + G C+++    L++E+     L+  L      + +     +     IA+G+ YL
Sbjct: 66  PNIIALRGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYL 121

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNP--------KISDFGLARMFGGDELQGNT 669
           H  +   IIHRDLK+SN+L+ + +          KI+DFGLAR +         
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA 175

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  149 bits (378), Expect = 1e-40
 Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 10/170 (5%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRN 565
              ++  ++G G FG VYKG+  +G+ VAVK L+    + Q L+ FKNE+ ++ K +H N
Sbjct: 24  GQITVGQRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           ++  +G        I + ++    SL   L     K     +  I I    A+G+ YLH 
Sbjct: 82  ILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLH- 137

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
                IIHRDLK++N+ L  D   KI DFGLA            +++ G+
Sbjct: 138 --AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  146 bits (371), Expect = 1e-39
 Identities = 49/182 (26%), Positives = 81/182 (44%), Gaps = 21/182 (11%)

Query: 507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNE--MLLIAKLQHR 564
             + ++   +G+G +G V++G    GE VAVK  SS+     + +  E  +     L+H 
Sbjct: 7   ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHE 62

Query: 565 NLVRILGCCIEQGEKI----LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           N++  +   +          LI  Y    SL  +L    +   L   + + I+  IA GL
Sbjct: 63  NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGL 118

Query: 621 LYLH-----HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF--GGDELQGNTKRIV 673
            +LH        +  I HRDLK+ N+L+ ++    I+D GLA M     ++L       V
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV 178

Query: 674 GT 675
           GT
Sbjct: 179 GT 180

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  144 bits (365), Expect = 2e-38
 Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 21/181 (11%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNE--MLLIAKLQHRN 565
           +   M  ++G+G +G V+ G+   GE+VAVK   +        +  E  +     ++H N
Sbjct: 37  KQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHEN 92

Query: 566 LVRILGCCIEQGEKI----LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           ++  +   I+         LI +Y  N SL  +L    K   L  ++ + +      GL 
Sbjct: 93  ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLC 148

Query: 622 YLH-----HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF--GGDELQGNTKRIVG 674
           +LH        +  I HRDLK+ N+L+ ++    I+D GLA  F    +E+       VG
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG 208

Query: 675 T 675
           T
Sbjct: 209 T 209

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  143 bits (362), Expect = 4e-38
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 10/166 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRN 565
           E   +   +G+G FG VY GR  +GE VA++ +  +  +   L+ FK E++   + +H N
Sbjct: 33  EQLEIGELIGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHEN 90

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V  +G C+      +I      ++L   + D   K +L       I + I +G+ YLH 
Sbjct: 91  VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLH- 147

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
            ++  I+H+DLK+ NV  D +    I+DFGL  + G  +      +
Sbjct: 148 -AK-GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDK 190

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  139 bits (353), Expect = 7e-37
 Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 15/165 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLN-----GEEVAVKRLSSQSG-QGLEEFKNEMLLIAKL 561
                   LGEG FG V            GE VAVK L + +G Q    +K E+ ++  L
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL 90

Query: 562 QHRNLVRILGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
            H ++++  GCC + G     L++EY+P  SL  +L     +  +G    +   + I +G
Sbjct: 91  YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEG 146

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + YLH  ++   IHRDL A NVLLD D   KI DFGLA+      
Sbjct: 147 MAYLH--AQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  138 bits (349), Expect = 1e-36
 Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 12/164 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
            +     +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQ
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69

Query: 563 HRNLVRILGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           H N+V+  G C   G +   LI+EY+P  SL  +L     K  +     +     I +G+
Sbjct: 70  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 127

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            YL   ++ R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 128 EYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  139 bits (351), Expect = 1e-36
 Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 12/164 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
            +     +LG+G FG V   R        GE VAVK+L   + + L +F+ E+ ++  LQ
Sbjct: 41  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 100

Query: 563 HRNLVRILGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           H N+V+  G C   G +   LI+EY+P  SL  +L     K  +     +     I +G+
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGM 158

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            YL   ++ R IHRDL   N+L++ +   KI DFGL ++   D+
Sbjct: 159 EYLG--TK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  137 bits (347), Expect = 3e-36
 Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 13/165 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKL 561
                   LGEG FG V   R        GE+VAVK L  +SG   + + K E+ ++  L
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80

Query: 562 QHRNLVRILGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
            H N+V+  G C E G     LI+E++P+ SL  +L  P  K  +  + ++     I +G
Sbjct: 81  YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKINLKQQLKYAVQICKG 138

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           + YL   SR + +HRDL A NVL++ +   KI DFGL +    D+
Sbjct: 139 MDYLG--SR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  138 bits (349), Expect = 3e-36
 Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 12/164 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
            +     +LG+G FG V   R        G  VAVK+L         +F+ E+ ++  L 
Sbjct: 23  RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82

Query: 563 HRNLVRILGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
              +V+  G     G +   L++EY+P+  L  FL     +  L     +     I +G+
Sbjct: 83  SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGM 140

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            YL   SR R +HRDL A N+L++ + + KI+DFGLA++   D+
Sbjct: 141 EYLG--SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  138 bits (349), Expect = 3e-36
 Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 24/204 (11%)

Query: 485 DRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS 544
           D       S LPL    ++A       ++  +G+G FG V++G+   GEEVAVK  SS+ 
Sbjct: 22  DMTTSGSGSGLPLLVQRTIA---RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE 77

Query: 545 GQGLEEFKNE--MLLIAKLQHRNLVRILGCCIEQGEKI----LILEYMPNKSLDVFLFDP 598
                 +  E  +     L+H N++  +    +         L+ +Y  + SL  +L   
Sbjct: 78  ---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--- 131

Query: 599 TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR-----IIHRDLKASNVLLDRDMNPKISD 653
             +  +  +  I +    A GL +LH           I HRDLK+ N+L+ ++    I+D
Sbjct: 132 -NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 190

Query: 654 FGLARMF--GGDELQGNTKRIVGT 675
            GLA       D +       VGT
Sbjct: 191 LGLAVRHDSATDTIDIAPNHRVGT 214

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  136 bits (345), Expect = 9e-36
 Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 12/163 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE-----VAVKRL-SSQSGQGLEEFKNEMLLIAKL 561
             F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
            + ++ R+LG C+    ++ I + MP   L  ++ +   K  +G Q  +     IA+G+ 
Sbjct: 75  DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMN 131

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           YL      R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 132 YL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  133 bits (336), Expect = 3e-35
 Identities = 49/157 (31%), Positives = 82/157 (52%), Gaps = 6/157 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
              +   ++G G FG V+ G  LN ++VA+K +   +    E+F  E  ++ KL H  LV
Sbjct: 8   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLV 66

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++ G C+EQ    L+ E+M +  L  +L   T++ L   +  +G+   + +G+ YL    
Sbjct: 67  QLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYL---E 121

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
              +IHRDL A N L+  +   K+SDFG+ R    D+
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  135 bits (343), Expect = 5e-35
 Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 7/159 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRN 565
           E+  +  ++G G FG V+ GRL      VAVK    +       +F  E  ++ +  H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +VR++G C ++    +++E +       FL   T+   L  +  + ++   A G+ YL  
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGARLRVKTLLQMVGDAAAGMEYLE- 230

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 IHRDL A N L+      KISDFG++R      
Sbjct: 231 --SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  133 bits (336), Expect = 5e-35
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 8/152 (5%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +   +   +G+G FG V  G    G +VAVK +  ++    + F  E  ++ +L+H NLV
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 77

Query: 568 RILGCCIEQGEKILI-LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           ++LG  +E+   + I  EYM   SL  +L     + +LG    +     + + + YL   
Sbjct: 78  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYL--- 133

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                +HRDL A NVL+  D   K+SDFGL +
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 165

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  134 bits (339), Expect = 6e-35
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 12/163 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE-----VAVKRLSSQSG-QGLEEFKNEMLLIAKL 561
                   LG G FG V+KG  +   E     V +K +  +SG Q  +   + ML I  L
Sbjct: 13  TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
            H ++VR+LG C     ++ + +Y+P  SL   +     +  LG Q  +     IA+G+ 
Sbjct: 73  DHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQ--HRGALGPQLLLNWGVQIAKGMY 129

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           YL       ++HR+L A NVLL      +++DFG+A +   D+
Sbjct: 130 YL---EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  136 bits (344), Expect = 1e-34
 Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 8/152 (5%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +   +   +G+G FG V  G    G +VAVK +  ++    + F  E  ++ +L+H NLV
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 249

Query: 568 RILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           ++LG  +E+   + ++ EYM   SL  +L     + +LG    +     + + + YL   
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYL--- 305

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                +HRDL A NVL+  D   K+SDFGL +
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 337

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  133 bits (336), Expect = 2e-34
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 21/169 (12%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE------VAVKRLSSQSGQGLEEFKNEMLLIAKL 561
            +  ++ +LGEG FG V+     N         VAVK L   S    ++F+ E  L+  L
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL------------FDPTKKRLLGWQAR 609
           QH+++VR  G C E    +++ EYM +  L+ FL             +      LG    
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160

Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           + +   +A G++YL   +    +HRDL   N L+ + +  KI DFG++R
Sbjct: 161 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  131 bits (331), Expect = 3e-34
 Identities = 49/158 (31%), Positives = 84/158 (53%), Gaps = 6/158 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
            + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71

Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           V++LG C  +    +I E+M   +L  +L +   ++ +     + +   I+  + YL   
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYL--- 127

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            +   IHRDL A N L+  +   K++DFGL+R+  GD 
Sbjct: 128 EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  130 bits (330), Expect = 5e-34
 Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 22/170 (12%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE------VAVKRLSSQSGQGLEEFKNEMLLIAKL 561
            +  ++ +LGEG FG V+     N         VAVK L   +    ++F+ E  L+  L
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQA 608
           QH ++V+  G C +    I++ EYM +  L+ FL                  K  LG   
Sbjct: 75  QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134

Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            + I   IA G++YL   +    +HRDL   N L+  ++  KI DFG++R
Sbjct: 135 MLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  129 bits (327), Expect = 6e-34
 Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 6/157 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E  ++  +LG G FG V  G+     +VAVK +   S    +EF  E   + KL H  LV
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLV 66

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           +  G C ++    ++ EY+ N  L  +L   +  + L     + +   + +G+ +L    
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFL---E 121

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             + IHRDL A N L+DRD+  K+SDFG+ R    D+
Sbjct: 122 SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  131 bits (331), Expect = 7e-34
 Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 12/163 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE-----VAVKRL-SSQSGQGLEEFKNEMLLIAKL 561
             F     LG G FG VYKG  +   E     VA+K L  + S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
            + ++ R+LG C+    ++ I + MP   L  ++ +   K  +G Q  +     IA+G+ 
Sbjct: 75  DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMN 131

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           YL      R++HRDL A NVL+    + KI+DFGLA++ G +E
Sbjct: 132 YL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  130 bits (328), Expect = 7e-34
 Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 6/157 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           ++ +   +LG G FG V  G+     +VA+K +   S    +EF  E  ++  L H  LV
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLV 82

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++ G C +Q    +I EYM N  L  +L     +     Q  + + + + + + YL    
Sbjct: 83  QLYGVCTKQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYL---E 137

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             + +HRDL A N L++     K+SDFGL+R    DE
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  131 bits (331), Expect = 7e-34
 Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 21/169 (12%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE---VAVKRL-SSQSGQGLEEFKNEMLLIAKL-Q 562
            +   +  +GEG FG V K R+         A+KR+    S     +F  E+ ++ KL  
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQAR 609
           H N++ +LG C  +G   L +EY P+ +L  FL                +    L  Q  
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144

Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +     +A+G+ YL   S+ + IHRDL A N+L+  +   KI+DFGL+R
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  130 bits (328), Expect = 1e-33
 Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 17/165 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE----VAVKRL--SSQSGQGLEEFKNEMLLIAKL 561
               +   LGEG FG V +G L   +     VAVK +   + S + +EEF +E   +   
Sbjct: 34  NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93

Query: 562 QHRNLVRILGCCIEQG-----EKILILEYMPNKSLDVFL---FDPTKKRLLGWQARIGII 613
            H N++R+LG CIE       + ++IL +M    L  +L      T  + +  Q  +  +
Sbjct: 94  SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153

Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             IA G+ YL   S    +HRDL A N +L  DM   ++DFGL++
Sbjct: 154 VDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  129 bits (326), Expect = 2e-33
 Identities = 57/171 (33%), Positives = 77/171 (45%), Gaps = 23/171 (13%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE------VAVKRL-SSQSGQGLEEFKNEMLLIAK 560
                  +LGE  FG VYKG L           VA+K L     G   EEF++E +L A+
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 68

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQ 607
           LQH N+V +LG   +     +I  Y  +  L  FL              D T K  L   
Sbjct: 69  LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128

Query: 608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             + ++  IA G+ YL   S   ++H+DL   NVL+   +N KISD GL R
Sbjct: 129 DFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFR 176

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  128 bits (325), Expect = 2e-33
 Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 6/157 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L   S    + F  E  L+ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLV 71

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R+     ++   I I EYM N SL  FL  P     L     + +   IA+G+ ++    
Sbjct: 72  RLYAVVTQEPIYI-ITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFI---E 126

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  128 bits (325), Expect = 2e-33
 Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 14/159 (8%)

Query: 512 MECKLGEGGFGPVYKGRLLNGE---EVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRNL 566
            + +LG G FG V KG     +    VAVK L   +      +E   E  ++ +L +  +
Sbjct: 21  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80

Query: 567 VRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           VR++G C  + E   L++E      L+ +L    + R +  +  I ++  ++ G+ YL  
Sbjct: 81  VRMIGIC--EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYL-- 133

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 +HRDL A NVLL      KISDFGL++    DE
Sbjct: 134 -EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  128 bits (325), Expect = 2e-33
 Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 13/164 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE----EVAVKRL---SSQSGQGLEEFKNEMLLIAK 560
           ++  +  KLG+G FG V +G           VAVK L        + +++F  E+  +  
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           L HRNL+R+ G  +    K+ + E  P  SL   L     +              +A+G+
Sbjct: 78  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGM 134

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            YL      R IHRDL A N+LL      KI DFGL R    ++
Sbjct: 135 GYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  128 bits (325), Expect = 2e-33
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 12/158 (7%)

Query: 512 MECKLGEGGFGPVYKGRLLNGEE---VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
            + +LG G FG V +G     ++   VA+K L         EE   E  ++ +L +  +V
Sbjct: 14  ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73

Query: 568 RILGCCIEQGEKILI-LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           R++G C  Q E +++ +E      L  FL    K+  +       ++  ++ G+ YL   
Sbjct: 74  RLIGVC--QAEALMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYL--- 126

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                +HRDL A NVLL      KISDFGL++  G D+
Sbjct: 127 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  132 bits (333), Expect = 3e-33
 Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG G FG V+        +VAVK +   S   +E F  E  ++  LQH  LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLV 246

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     ++   I I E+M   SL  FL    +         I     IA+G+ ++    
Sbjct: 247 KLHAVVTKEPIYI-ITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFI---E 301

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           +   IHRDL+A+N+L+   +  KI+DFGLAR+   +E
Sbjct: 302 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  129 bits (326), Expect = 3e-33
 Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 18/166 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE----VAVKRL--SSQSGQGLEEFKNEMLLIAKL 561
           + F++   LG+G FG V + +L   +     VAVK L     +   +EEF  E   + + 
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82

Query: 562 QHRNLVRILGCCIEQGEKI------LILEYMPNKSLDVFLFD---PTKKRLLGWQARIGI 612
            H ++ +++G  +    K       +IL +M +  L  FL           L  Q  +  
Sbjct: 83  DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142

Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +  IA G+ YL   S    IHRDL A N +L  DM   ++DFGL+R
Sbjct: 143 MVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  129 bits (326), Expect = 4e-33
 Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 10/162 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAKLQ 562
               +E  +G G  G V  GRL    +    VA+K L +  + +   +F +E  ++ +  
Sbjct: 49  SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N++R+ G        +++ EYM N SLD FL     +        +G++ G+  G+ Y
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ--FTIMQLVGMLRGVGAGMRY 166

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           L   S    +HRDL A NVL+D ++  K+SDFGL+R+   D 
Sbjct: 167 L---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  132 bits (334), Expect = 4e-33
 Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 6/158 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE-EVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
            + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NL
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 278

Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           V++LG C  +    +I E+M   +L  +L +   ++ +     + +   I+  + YL   
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYL--- 334

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            +   IHR+L A N L+  +   K++DFGL+R+  GD 
Sbjct: 335 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  127 bits (321), Expect = 6e-33
 Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 25/175 (14%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE--------EVAVKRLSSQSGQGLEEFKNEMLLIA 559
           E+      LG+G F  ++KG              EV +K L        E F     +++
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67

Query: 560 KLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
           KL H++LV   G C+   E IL+ E++   SLD +L     K  +    ++ + + +A  
Sbjct: 68  KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK--NKNCINILWKLEVAKQLAAA 125

Query: 620 LLYL--HHYSRFRIIHRDLKASNVLLDRDMNP--------KISDFGLARMFGGDE 664
           + +L  +       IH ++ A N+LL R+ +         K+SD G++      +
Sbjct: 126 MHFLEENTL-----IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  127 bits (322), Expect = 7e-33
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 19/154 (12%)

Query: 515 KLGEGGFGPVYKGRLLNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRI 569
            +G G FG VY G LL+ +      AVK L        + +F  E +++    H N++ +
Sbjct: 32  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91

Query: 570 LGCCIEQGEKIL-ILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           LG C+      L +L YM +  L  F+     +PT K L      IG    +A+G+ YL 
Sbjct: 92  LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL------IGFGLQVAKGMKYL- 144

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             +  + +HRDL A N +LD     K++DFGLAR
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  128 bits (323), Expect = 8e-33
 Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 17/165 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE------VAVKRL-SSQSGQGLEEFKNEMLLIAK 560
           E  +M  +LG+G FG VY+G      +      VA+K +  + S +   EF NE  ++ +
Sbjct: 25  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-------FDPTKKRLLGWQARIGII 613
               ++VR+LG   +    ++I+E M    L  +L        +            I + 
Sbjct: 85  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144

Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             IA G+ YL   +  + +HRDL A N ++  D   KI DFG+ R
Sbjct: 145 GEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  129 bits (325), Expect = 1e-32
 Identities = 63/245 (25%), Positives = 99/245 (40%), Gaps = 29/245 (11%)

Query: 424 GNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENMETSQDLLAFDITTRPNEFSEAN 483
           G ++      I+VP     P +   C              S++L      T   + S  N
Sbjct: 15  GRRRASVAAGILVPRGS--PGLDGICSIEELSTSLYKKAGSENLYFQGANTVHIDLSALN 72

Query: 484 GDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEE----VAVKR 539
            +     +   +   SL               +G G FG VY G LL+ +      AVK 
Sbjct: 73  PELVQAVQHVVIGPSSL--------IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS 124

Query: 540 L-SSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL-ILEYMPNKSLDVFL-- 595
           L        + +F  E +++    H N++ +LG C+      L +L YM +  L  F+  
Sbjct: 125 LNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN 184

Query: 596 --FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISD 653
              +PT K L      IG    +A+G+ +L   +  + +HRDL A N +LD     K++D
Sbjct: 185 ETHNPTVKDL------IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVAD 235

Query: 654 FGLAR 658
           FGLAR
Sbjct: 236 FGLAR 240

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  126 bits (320), Expect = 1e-32
 Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 19/184 (10%)

Query: 481 EANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEE----VA 536
           + +     + KD  +P   +            +  +G+G FG VY G  ++  +     A
Sbjct: 2   DLDSALLAEVKDVLIPHERV--------VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCA 53

Query: 537 VKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI-LEYMPNKSLDVF 594
           +K L      Q +E F  E LL+  L H N++ ++G  +       + L YM +  L  F
Sbjct: 54  IKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQF 113

Query: 595 LFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDF 654
           +  P  +R    +  I     +A+G+ YL   +  + +HRDL A N +LD     K++DF
Sbjct: 114 IRSP--QRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADF 168

Query: 655 GLAR 658
           GLAR
Sbjct: 169 GLAR 172

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  127 bits (321), Expect = 2e-32
 Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 11/163 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE-----VAVKRL-SSQSGQGLEEFKNEMLLIAKL 561
              + +  +G G FG VYKG L          VA+K L +  + +   +F  E  ++ + 
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
            H N++R+ G   +    ++I EYM N +LD FL    K         +G++ GIA G+ 
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGMLRGIAAGMK 161

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           YL   +    +HRDL A N+L++ ++  K+SDFGL+R+   D 
Sbjct: 162 YL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  127 bits (320), Expect = 2e-32
 Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 17/165 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE------EVAVKRL-SSQSGQGLEEFKNEMLLIAK 560
           +N ++   LG G FG VY+G++          +VAVK L    S Q   +F  E L+I+K
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + +++E M    L  FL      P++   L     + +   I
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 150 ACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  127 bits (322), Expect = 3e-32
 Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 10/162 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAKLQ 562
            N S++  +G G FG V  GRL    +    VA+K L    + +   +F  E  ++ +  
Sbjct: 45  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N++R+ G   +    +++ EYM N SLD FL              +G++ GIA G+ Y
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKY 162

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           L   S    +HRDL A N+L++ ++  K+SDFGL R+   D 
Sbjct: 163 L---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  127 bits (321), Expect = 4e-32
 Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 17/165 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE------EVAVKRL-SSQSGQGLEEFKNEMLLIAK 560
           +N ++   LG G FG VY+G++          +VAVK L    S Q   +F  E L+I+K
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL----FDPTKKRLLGWQARIGIIEGI 616
             H+N+VR +G  ++   + ++LE M    L  FL      P++   L     + +   I
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGLAR 658
           A G  YL        IHRD+ A N LL         KI DFG+AR
Sbjct: 191 ACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  124 bits (314), Expect = 4e-32
 Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 11/162 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAKLQ 562
           E   +   +GEG FG V++G  ++ E     VA+K   +  S    E+F  E L + +  
Sbjct: 15  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H ++V+++G   E    I I+E      L  FL    +K  L   + I     ++  L Y
Sbjct: 75  HPHIVKLIGVITENPVWI-IMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAY 131

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           L      R +HRD+ A NVL+  +   K+ DFGL+R      
Sbjct: 132 L---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  123 bits (312), Expect = 9e-32
 Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 11/162 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAKLQ 562
           E+  +   LGEG FG VY+G   N +     VAVK      +    E+F +E +++  L 
Sbjct: 12  EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 71

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H ++V+++G   E+   I I+E  P   L  +L     K  L     +     I + + Y
Sbjct: 72  HPHIVKLIGIIEEEPTWI-IMELYPYGELGHYL--ERNKNSLKVLTLVLYSLQICKAMAY 128

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           L        +HRD+   N+L+      K+ DFGL+R    ++
Sbjct: 129 L---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  127 bits (322), Expect = 1e-31
 Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 6/157 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLV 242

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     E+   I + EYM   SL  FL      + L     + +   IA G+ Y+    
Sbjct: 243 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYV---E 297

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  125 bits (315), Expect = 1e-31
 Identities = 51/179 (28%), Positives = 74/179 (41%), Gaps = 31/179 (17%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE------VAVKRL-SSQSGQGLEEFKNEMLLIAK 560
            N      +GEG FG V++ R            VAVK L    S     +F+ E  L+A+
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL---------------------FDPT 599
             + N+V++LG C       L+ EYM    L+ FL                         
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166

Query: 600 KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
               L    ++ I   +A G+ YL   S  + +HRDL   N L+  +M  KI+DFGL+R
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSR 222

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  123 bits (312), Expect = 2e-31
 Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 25/173 (14%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE------VAVKRL-SSQSGQGLEEFKNEMLLIAK 560
           +   +   LG G FG V +      ++      VAVK L    +        +E+ ++  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 561 L-QHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFL-------------FDPTKKRLLG 605
           +  H N+V +LG C + G  + +I+E+    +L  +L              +   K  L 
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146

Query: 606 WQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +  I     +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 147 LEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 196

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  128 bits (324), Expect = 2e-31
 Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 10/157 (6%)

Query: 512 MECKLGEGGFGPVYKGRLLNGEE---VAVKRL-SSQSGQGLEEFKNEMLLIAKLQHRNLV 567
            + +LG G FG V +G     ++   VA+K L         EE   E  ++ +L +  +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R++G C  +   + ++E      L  FL    K+  +       ++  ++ G+ YL    
Sbjct: 400 RLIGVCQAEALML-VMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYL---E 453

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
               +HR+L A NVLL      KISDFGL++  G D+
Sbjct: 454 EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  123 bits (312), Expect = 2e-31
 Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 31/179 (17%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE------VAVKRL-SSQSGQGLEEFKNEMLLIAK 560
           +N  +   LGEG FG V K    + +       VAVK L  + S   L +  +E  ++ +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEG 615
           + H +++++ G C + G  +LI+EY    SL  FL       P      G +    +   
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142

Query: 616 ----------------IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                           I+QG+ YL   +  +++HRDL A N+L+      KISDFGL+R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  127 bits (321), Expect = 3e-31
 Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 6/157 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLV 325

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++     E+   I + EYM   SL  FL      + L     + +   IA G+ Y+    
Sbjct: 326 QLYAVVSEEPIYI-VTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYV---E 380

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           R   +HRDL+A+N+L+  ++  K++DFGLAR+   +E
Sbjct: 381 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  123 bits (312), Expect = 3e-31
 Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 26/174 (14%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE--------VAVKRL-SSQSGQGLEEFKNEMLLI 558
           +  ++   LGEG FG V     +  ++        VAVK L    + + L +  +EM ++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 559 AKL-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLL 604
             + +H+N++ +LG C + G   +I+EY    +L  +L              +   +  +
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154

Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            ++  +     +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 155 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  124 bits (314), Expect = 3e-31
 Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 26/174 (14%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE--------VAVKRL-SSQSGQGLEEFKNEMLLI 558
           +  ++   LGEG FG V     +  ++        VAVK L    + + L +  +EM ++
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140

Query: 559 AKL-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLL 604
             + +H+N++ +LG C + G   +I+EY    +L  +L              +   +  +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200

Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            ++  +     +A+G+ YL   +  + IHRDL A NVL+  +   KI+DFGLAR
Sbjct: 201 TFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  122 bits (307), Expect = 8e-31
 Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 17/161 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
           +++    KLGEGGF  V     L +G   A+KR+     Q  EE + E  +     H N+
Sbjct: 29  KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88

Query: 567 VRILGCCIEQGEK----ILILEYMPNKSLDVFLFDPTKKRLLGWQ----ARI-GIIEGIA 617
           +R++  C+ +        L+L +    +L    ++  ++           +I  ++ GI 
Sbjct: 89  LRLVAYCLRERGAKHEAWLLLPFFKRGTL----WNEIERLKDKGNFLTEDQILWLLLGIC 144

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +GL  +H        HRDLK +N+LL  +  P + D G   
Sbjct: 145 RGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN 182

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  121 bits (305), Expect = 1e-30
 Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 26/174 (14%)

Query: 508 ENFSMECKLGEGGFGPVYKGRL--LNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAK 560
              S    LG G FG V +     L   +    VAVK L  S      E   +E+ +++ 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 561 L-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG---- 615
           L  H N+V +LG C   G  ++I EY     L  FL       +    +   + +     
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 616 -----------IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                      +A+G+ +L   +    IHRDL A N+LL      KI DFGLAR
Sbjct: 143 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR 193

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  126 bits (317), Expect = 2e-30
 Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 11/162 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAKLQ 562
           E   +   +GEG FG V++G  ++ E     VA+K   +  S    E+F  E L + +  
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H ++V+++G   E    I I+E      L  FL    +K  L   + I     ++  L Y
Sbjct: 450 HPHIVKLIGVITENPVWI-IMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAY 506

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           L      R +HRD+ A NVL+  +   K+ DFGL+R      
Sbjct: 507 L---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  121 bits (305), Expect = 2e-30
 Identities = 53/170 (31%), Positives = 72/170 (42%), Gaps = 22/170 (12%)

Query: 508 ENFSMECKLGEGGFGPVYKGRL--LNGEE----VAVKRL-SSQSGQGLEEFKNEMLLIAK 560
            N      LG G FG V +     L  E+    VAVK L S+      E   +E+ +++ 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105

Query: 561 L-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-----------FDPTKKRLLGWQA 608
           L QH N+V +LG C   G  ++I EY     L  FL                      + 
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165

Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +     +AQG+ +L   +    IHRD+ A NVLL      KI DFGLAR
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  119 bits (300), Expect = 4e-30
 Identities = 50/185 (27%), Positives = 83/185 (44%), Gaps = 28/185 (15%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
            +F     +G GGFG V+K +  ++G+   +KR+   +    E+ + E+  +AKL H N+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66

Query: 567 VRILGCCIEQGEKI----------------LILEYMPNKSLDVFLFDPTKKRLLGWQARI 610
           V   GC                        + +E+    +L+ ++     ++L    A  
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126

Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTK 670
            + E I +G+ Y+H  S+ ++I+RDLK SN+ L      KI DFGL      D   G   
Sbjct: 127 -LFEQITKGVDYIH--SK-KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRT 179

Query: 671 RIVGT 675
           R  GT
Sbjct: 180 RSKGT 184

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  120 bits (304), Expect = 7e-30
 Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 26/174 (14%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGE--------EVAVKRL-SSQSGQGLEEFKNEMLLI 558
           +   +   LGEG FG V     +  +        +VAVK L S  + + L +  +EM ++
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128

Query: 559 AKL-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLL 604
             + +H+N++ +LG C + G   +I+EY    +L  +L                  +  L
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188

Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
             +  +     +A+G+ YL   +  + IHRDL A NVL+  D   KI+DFGLAR
Sbjct: 189 SSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  120 bits (302), Expect = 7e-30
 Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 9/171 (5%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           E +    K+GEG FG     +   +G +  +K   +S  S +  EE + E+ ++A ++H 
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V+      E G   ++++Y     L   + +  K  L      +     I   L ++H
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQICLALKHVH 142

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              R +I+HRD+K+ N+ L +D   ++ DFG+AR+             +GT
Sbjct: 143 --DR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA--CIGT 188

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  119 bits (300), Expect = 8e-30
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 12/172 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKR--LSSQSGQGLEEFKNEMLLIAKLQHRN 565
             +S+  ++G GG   V++      +  A+K   L     Q L+ ++NE+  + KLQ  +
Sbjct: 28  RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87

Query: 566 L--VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
              +R+    I      +++E   N  L+ +L    KK +  W+ +    + + + +  +
Sbjct: 88  DKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKK--KKSIDPWERKS-YWKNMLEAVHTI 143

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H   +  I+H DLK +N L+  D   K+ DFG+A     D         VGT
Sbjct: 144 H---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 191

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  118 bits (297), Expect = 1e-29
 Identities = 54/163 (33%), Positives = 82/163 (50%), Gaps = 9/163 (5%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
           LG+G +G VY GR L N   +A+K +  +  +  +    E+ L   L+H+N+V+ LG   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89

Query: 575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII-EGIAQGLLYLHHYSRFRIIH 633
           E G   + +E +P  SL   L       L   +  IG   + I +GL YLH     +I+H
Sbjct: 90  ENGFIKIFMEQVPGGSLSALL-RSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 145

Query: 634 RDLKASNVLLD-RDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           RD+K  NVL++      KISDFG ++   G  +   T+   GT
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGT 186

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  118 bits (297), Expect = 1e-29
 Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 16/163 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK---RLSSQSGQGLEEFKNEMLLIAKLQH 563
             +     LG+GGF   ++       E  A K   +         E+   E+ +   L H
Sbjct: 15  RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 74

Query: 564 RNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGL 620
           +++V   G   E  + + ++LE    +SL     +    +K L   +AR   +  I  G 
Sbjct: 75  QHVVGFHGF-FEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARY-YLRQIVLGC 128

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
            YLH   R R+IHRDLK  N+ L+ D+  KI DFGLA     D
Sbjct: 129 QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  118 bits (297), Expect = 2e-29
 Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 16/156 (10%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVK---RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG+GGF   ++       E  A K   +         E+   E+ +   L H+++V   G
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108

Query: 572 CCIEQGEKI-LILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
              E  + + ++LE    +SL     +    +K L   +AR   +  I  G  YLH   R
Sbjct: 109 F-FEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARY-YLRQIVLGCQYLH---R 159

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            R+IHRDLK  N+ L+ D+  KI DFGLA     D 
Sbjct: 160 NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  118 bits (297), Expect = 3e-29
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 12/172 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKR--LSSQSGQGLEEFKNEMLLIAKLQHRN 565
             +S+  ++G GG   V++      +  A+K   L     Q L+ ++NE+  + KLQ  +
Sbjct: 9   RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68

Query: 566 L--VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
              +R+    I      +++E   N  L+ +L    KK +  W+ +    + + + +  +
Sbjct: 69  DKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKK--KKSIDPWERKS-YWKNMLEAVHTI 124

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H   +  I+H DLK +N L+  D   K+ DFG+A     D         VGT
Sbjct: 125 H---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 172

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  116 bits (293), Expect = 4e-29
 Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 17/176 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRN 565
            +F     LG GGFG V++ +  ++    A+KR+         E+   E+  +AKL+H  
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 566 LVRILGCCIEQGEKI------------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGII 613
           +VR     +E+                + ++    ++L  ++              + I 
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124

Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
             IA+ + +LH  S+  ++HRDLK SN+    D   K+ DFGL      DE +   
Sbjct: 125 LQIAEAVEFLH--SK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  116 bits (292), Expect = 4e-29
 Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 16/169 (9%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           ++G G F  VYKG       EVA    +    +    + FK E  ++  LQH N+VR   
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 572 CCIEQGEK----ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
                 +     +L+ E M + +L  +L    + +++  +        I +GL +LH   
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYL---KRFKVMKIKVLRSWCRQILKGLQFLHT-R 148

Query: 628 RFRIIHRDLKASNVLLD-RDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              IIHRDLK  N+ +     + KI D GLA +          K ++GT
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGT 193

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  117 bits (296), Expect = 5e-29
 Identities = 52/187 (27%), Positives = 69/187 (36%), Gaps = 47/187 (25%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE------VAVKRL-SSQSGQGLEEFKNEMLLIAK 560
           EN      LG G FG V         +      VAVK L         E   +E+ ++ +
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104

Query: 561 L-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL------------------------ 595
           L  H N+V +LG C   G   LI EY     L  +L                        
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164

Query: 596 --FDPTKKRLL--GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI 651
                T + LL   +Q        +A+G+ +L        +HRDL A NVL+      KI
Sbjct: 165 DLNVLTFEDLLCFAYQ--------VAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKI 213

Query: 652 SDFGLAR 658
            DFGLAR
Sbjct: 214 CDFGLAR 220

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  118 bits (298), Expect = 5e-29
 Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 12/165 (7%)

Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKR--LSSQSGQGLEEFKNEMLLIAKLQHRNL--VRIL 570
           ++G GG   V++      +  A+K   L     Q L+ ++NE+  + KLQ  +   +R+ 
Sbjct: 63  QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
              I      +++E   N  L+ +L    KK +  W+ +    + + + +  +H   +  
Sbjct: 123 DYEITDQYIYMVMEC-GNIDLNSWLKK--KKSIDPWERKS-YWKNMLEAVHTIH---QHG 175

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           I+H DLK +N L+  D   K+ DFG+A     D         VG 
Sbjct: 176 IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGA 219

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  116 bits (293), Expect = 6e-29
 Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 10/173 (5%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL---SSQSGQGLEEFKNEMLLIAKLQH 563
            NF +E K+G G F  VY+   LL+G  VA+K++        +   +   E+ L+ +L H
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI-GIIEGIAQGLLY 622
            N+++     IE  E  ++LE      L   +    K++ L  +  +      +   L +
Sbjct: 92  PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           +H     R++HRD+K +NV +      K+ D GL R F       ++  +VGT
Sbjct: 152 MH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGT 199

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  114 bits (288), Expect = 1e-28
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 10/176 (5%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           E++ +   +G G +G   K R   +G+ +  K     S +    +   +E+ L+ +L+H 
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 565 NLVRILGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKRLLGWQARI-GIIEGIAQGLL 621
           N+VR     I++    L  ++EY     L   +   TK+R    +  +  ++  +   L 
Sbjct: 66  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125

Query: 622 YLH--HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             H        ++HRDLK +NV LD   N K+ DFGLAR+   D     T   VGT
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT--FVGT 179

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  115 bits (290), Expect = 1e-28
 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 24/170 (14%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
             +F     LG+G FG V K R  L+    A+K++     + L    +E++L+A L H+ 
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63

Query: 566 LVRILGCCIEQGEKI-------------LILEYMPNKSLDVFLFD--PTKKRLLGWQARI 610
           +VR     +E+   +             + +EY  N +L    +D   ++          
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL----YDLIHSENLNQQRDEYW 119

Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
            +   I + L Y+H  S+  IIHRDLK  N+ +D   N KI DFGLA+  
Sbjct: 120 RLFRQILEALSYIH--SQ-GIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  114 bits (288), Expect = 2e-28
 Identities = 47/170 (27%), Positives = 91/170 (53%), Gaps = 8/170 (4%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
            E + +  +LG+G FG VYK +    G   A K + ++S + LE++  E+ ++A   H  
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++LG     G+  +++E+ P  ++D  +     + L   Q ++ +   + + L +LH 
Sbjct: 78  IVKLLGAYYHDGKLWIMIEFCPGGAVDA-IMLELDRGLTEPQIQV-VCRQMLEALNFLH- 134

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
               RIIHRDLKA NVL+  + + +++DFG++        + ++   +GT
Sbjct: 135 --SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGT 180

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  114 bits (287), Expect = 3e-28
 Identities = 46/171 (26%), Positives = 89/171 (52%), Gaps = 12/171 (7%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
            + ++   K+G+G  G VY    +  G+EVA+++++ Q     E   NE+L++ + ++ N
Sbjct: 19  KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII-EGIAQGLLYLH 624
           +V  L   +   E  +++EY+   SL     D   +  +  + +I  +     Q L +LH
Sbjct: 79  IVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMD-EGQIAAVCRECLQALEFLH 133

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
                ++IHRD+K+ N+LL  D + K++DFG       ++ + +T  +VGT
Sbjct: 134 ---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGT 179

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score =  113 bits (285), Expect = 6e-28
 Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 33/181 (18%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN--------EMLLI 558
           ENF    K+GEG +G VYK R  L GE VA+K++       L+            E+ L+
Sbjct: 3   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR------LDTETEGVPSTAIREISLL 56

Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYMPN------KSLDVFLFDPTKKRLLGWQARIGI 612
            +L H N+V++L     + +  L+ E++         +  +        +   +Q     
Sbjct: 57  KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ----- 111

Query: 613 IEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRI 672
              + QGL + H +   R++HRDLK  N+L++ +   K++DFGLAR F G  ++  T  +
Sbjct: 112 ---LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEV 164

Query: 673 V 673
           V
Sbjct: 165 V 165

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  112 bits (283), Expect = 8e-28
 Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 17/158 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEE-FKNEMLLIAKLQH 563
           E+F +   LG+G F  VY+   +  G EVA+K +   +    G+ +  +NE+ +  +L+H
Sbjct: 11  EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70

Query: 564 RNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTK---KRLLGWQARIGIIEGIAQG 619
            +++ +     E    + L+LE   N  +        K   K     +AR   +  I  G
Sbjct: 71  PSILELYNY-FEDSNYVYLVLEMCHNGEM----NRYLKNRVKPFSENEARH-FMHQIITG 124

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
           +LYLH      I+HRDL  SN+LL R+MN KI+DFGLA
Sbjct: 125 MLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLA 159

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  112 bits (281), Expect = 2e-27
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 12/171 (7%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
                   K+GEG  G V   R   +G +VAVK +  +  Q  E   NE++++   QH N
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII-EGIAQGLLYLH 624
           +V +    +   E  +++E++   +L     D   +  L  + +I  + E + Q L YLH
Sbjct: 104 VVEMYKSYLVGEELWVLMEFLQGGALT----DIVSQVRLN-EEQIATVCEAVLQALAYLH 158

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
                 +IHRD+K+ ++LL  D   K+SDFG       D  +  +  +VGT
Sbjct: 159 ---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS--LVGT 204

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  111 bits (280), Expect = 3e-27
 Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 31/179 (17%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKN--------EMLLIA 559
           E +    K+GEG +G VYK +   G  VA+KR+       L+            E+ L+ 
Sbjct: 21  EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIR------LDAEDEGIPSTAIREISLLK 74

Query: 560 KLQHRNLVRILGCCIEQGEKILILEYMPN---KSLDVF--LFDPTKKRLLGWQARIGIIE 614
           +L H N+V ++     +    L+ E+M     K LD        ++ ++  +Q       
Sbjct: 75  ELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQ------- 127

Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
            + +G+ + H +   RI+HRDLK  N+L++ D   K++DFGLAR F G  ++  T  +V
Sbjct: 128 -LLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVV 181

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  111 bits (278), Expect = 6e-27
 Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 13/167 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRN 565
             + +   LG+G    V++GR    G+  A+K  +     + ++    E  ++ KL H+N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 566 LVRILGCCIEQGEK---ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           +V++     E+      +LI+E+ P  SL   L +P+    L     + ++  +  G+ +
Sbjct: 69  IVKLFAI-EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127

Query: 623 LHHYSRFRIIHRDLKASNVLL----DRDMNPKISDFGLARMFGGDEL 665
           L       I+HR++K  N++     D     K++DFG AR    DE 
Sbjct: 128 LREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  109 bits (276), Expect = 7e-27
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 32/180 (17%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN--------EMLLI 558
           + +    K+GEG +G V+K +     E VA+KR+       L++           E+ L+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR------LDDDDEGVPSSALREICLL 55

Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYMPN---KSLDV--FLFDPTKKRLLGWQARIGII 613
            +L+H+N+VR+        +  L+ E+      K  D      DP   +   +Q      
Sbjct: 56  KELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQ------ 109

Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
             + +GL + H      ++HRDLK  N+L++R+   K+++FGLAR F G  ++  +  +V
Sbjct: 110 --LLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVV 163

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  110 bits (276), Expect = 1e-26
 Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 12/162 (7%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNL 566
              +   L EGGF  VY+ + + +G E A+KRL S   +       E+  + KL  H N+
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88

Query: 567 VRILGCCIEQGEK-------ILILEYMPNKSL-DVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           V+         E+        L+L  +    L +      ++  L        I     +
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVL-KIFYQTCR 147

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
            + ++H   +  IIHRDLK  N+LL      K+ DFG A   
Sbjct: 148 AVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  108 bits (273), Expect = 2e-26
 Identities = 47/182 (25%), Positives = 89/182 (48%), Gaps = 21/182 (11%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRN 565
           +++ ++  +G G    V         E+VA+KR++  +    ++E   E+  +++  H N
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIE--GIA------ 617
           +V      + + E  L+++ +   S+     D  K  +   + + G+++   IA      
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSV----LDIIKHIVAKGEHKSGVLDESTIATILREV 130

Query: 618 -QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL-ARMFGGDELQGNTKR--IV 673
            +GL YLH   +   IHRD+KA N+LL  D + +I+DFG+ A +  G ++  N  R   V
Sbjct: 131 LEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFV 187

Query: 674 GT 675
           GT
Sbjct: 188 GT 189

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  110 bits (277), Expect = 3e-26
 Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 13/167 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRN 565
             + +   LG+G    V++GR    G+  A+K  +     + ++    E  ++ KL H+N
Sbjct: 9   HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKN 68

Query: 566 LVRILGCCIEQGEK---ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           +V++     E+      +LI+E+ P  SL   L +P+    L     + ++  +  G+ +
Sbjct: 69  IVKLF-AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127

Query: 623 LHHYSRFRIIHRDLKASNVLL----DRDMNPKISDFGLARMFGGDEL 665
           L       I+HR++K  N++     D     K++DFG AR    DE 
Sbjct: 128 LR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  107 bits (271), Expect = 3e-26
 Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 31/179 (17%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKN--------EMLLIA 559
           E +    K+GEG +G VYK +   GE  A+K++       LE+           E+ ++ 
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIR------LEKEDEGIPSTTIREISILK 55

Query: 560 KLQHRNLVRILGCCIEQGEKILILEYMPN---KSLDV--FLFDPTKKRLLGWQARIGIIE 614
           +L+H N+V++      +   +L+ E++     K LDV     +    +    Q       
Sbjct: 56  ELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQ------- 108

Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
            +  G+ Y H     R++HRDLK  N+L++R+   KI+DFGLAR F G  ++  T  IV
Sbjct: 109 -LLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV 162

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  108 bits (272), Expect = 6e-26
 Identities = 46/207 (22%), Positives = 76/207 (36%), Gaps = 17/207 (8%)

Query: 474 TRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNG 532
            +         D         L               + + ++G G FG V++ +    G
Sbjct: 25  AKLQRLGPETEDNEGVLLTEKLKPVD-YEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTG 83

Query: 533 EEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLD 592
            + AVK++  +  +       E++  A L    +V + G   E     + +E +   SL 
Sbjct: 84  FQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLG 138

Query: 593 VFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP-KI 651
             +    +   L     +  +    +GL YLH     RI+H D+KA NVLL  D +   +
Sbjct: 139 QLI---KQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAAL 192

Query: 652 SDFGLARMFGGDELQGNTKR---IVGT 675
            DFG A     D L  +      I GT
Sbjct: 193 CDFGHALCLQPDGLGKSLLTGDYIPGT 219

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  107 bits (270), Expect = 6e-26
 Identities = 50/172 (29%), Positives = 88/172 (51%), Gaps = 13/172 (7%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHR 564
            E F+   K+G+G FG V+KG      + VA+K +  +  +  +E+ + E+ ++++    
Sbjct: 21  EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII-EGIAQGLLYL 623
            + +  G  ++  +  +I+EY+   S      D  +   L  + +I  I   I +GL YL
Sbjct: 81  YVTKYYGSYLKDTKLWIIMEYLGGGSAL----DLLEPGPLD-ETQIATILREILKGLDYL 135

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H     + IHRD+KA+NVLL      K++DFG+A      +++ NT   VGT
Sbjct: 136 H---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGT 182

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  108 bits (271), Expect = 6e-26
 Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 32/185 (17%)

Query: 505 AATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQG-----LEEFKNEMLLI 558
           +++  F    KLG G +  VYKG     G  VA+K +   S +G     + E      L+
Sbjct: 2   SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREIS----LM 57

Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYM----------PNKSLDVFLFDPTKKRLLGWQA 608
            +L+H N+VR+      + +  L+ E+M                    +    +   WQ 
Sbjct: 58  KELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ- 116

Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGN 668
                  + QGL + H     +I+HRDLK  N+L+++    K+ DFGLAR F G  +   
Sbjct: 117 -------LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF-GIPVNTF 165

Query: 669 TKRIV 673
           +  +V
Sbjct: 166 SSEVV 170

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  108 bits (272), Expect = 6e-26
 Identities = 58/180 (32%), Positives = 86/180 (47%), Gaps = 12/180 (6%)

Query: 482 ANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL 540
             G R    KD    +  L       + FS   ++G G FG VY  R + N E VA+K++
Sbjct: 30  PAGGRAGSLKDP--DVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKM 87

Query: 541 S---SQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD 597
           S    QS +  ++   E+  + KL+H N ++  GC + +    L++EY    + D  L +
Sbjct: 88  SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD--LLE 145

Query: 598 PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
             KK L   +    +  G  QGL YLH      +IHRD+KA N+LL      K+ DFG A
Sbjct: 146 VHKKPLQEVEIAA-VTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA 201

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  107 bits (269), Expect = 8e-26
 Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 14/199 (7%)

Query: 480 SEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK 538
           S      R+  +     L   +      E F +  KLGEG +G VYK      G+ VA+K
Sbjct: 1   SLETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIK 60

Query: 539 RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL-DVFLFD 597
           ++  +    L+E   E+ ++ +    ++V+  G   +  +  +++EY    S+ D  +  
Sbjct: 61  QVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD--IIR 116

Query: 598 PTKKRLLGWQARIGII-EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL 656
              K L   +  I  I +   +GL YLH     R IHRD+KA N+LL+ + + K++DFG+
Sbjct: 117 LRNKTLTEDE--IATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGV 171

Query: 657 ARMFGGDELQGNTKRIVGT 675
           A        + NT  ++GT
Sbjct: 172 AGQLTDTMAKRNT--VIGT 188

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  108 bits (271), Expect = 9e-26
 Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 34/171 (19%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKN--------EML 556
           + +     LGEG F  VYK R     + VA+K  +L  +      E K+        E+ 
Sbjct: 10  KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHR-----SEAKDGINRTALREIK 64

Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPN------KSLDVFLFDPTKKRLLGWQARI 610
           L+ +L H N++ +L     +    L+ ++M        K   + L     K  +      
Sbjct: 65  LLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYM-LM--- 120

Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
                  QGL YLH +    I+HRDLK +N+LLD +   K++DFGLA+ FG
Sbjct: 121 -----TLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  106 bits (267), Expect = 2e-25
 Identities = 56/216 (25%), Positives = 86/216 (39%), Gaps = 38/216 (17%)

Query: 477 NEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEV 535
           +      G    +++       S A  A + + +    KLGEG +G VYK    +  E V
Sbjct: 3   HHHHHHMGTLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETV 62

Query: 536 AVKRLSSQSGQGLEEFKN--------EMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP 587
           A+KR+       LE  +         E+ L+ +LQHRN++ +           LI EY  
Sbjct: 63  AIKRIR------LEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYA- 115

Query: 588 NKSLDVFL-----FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVL 642
              L  ++           +   +Q        +  G+ + H     R +HRDLK  N+L
Sbjct: 116 ENDLKKYMDKNPDVSMRVIKSFLYQ--------LINGVNFCHSR---RCLHRDLKPQNLL 164

Query: 643 LDRDMNP-----KISDFGLARMFGGDELQGNTKRIV 673
           L           KI DFGLAR F G  ++  T  I+
Sbjct: 165 LSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEII 199

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  105 bits (264), Expect = 4e-25
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 31/168 (18%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN--------EMLLI 558
           E +    K+GEG +G V+K R    G+ VA+K+          E           E+ ++
Sbjct: 3   EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF------LESEDDPVIKKIALREIRML 56

Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYMPN---KSLDVF--LFDPTKKRLLGWQARIGII 613
            +L+H NLV +L     +    L+ EY  +     LD +         + + WQ      
Sbjct: 57  KQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ------ 110

Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
               Q + + H +     IHRD+K  N+L+ +    K+ DFG AR+  
Sbjct: 111 --TLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLT 153

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  105 bits (265), Expect = 5e-25
 Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 27/166 (16%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKN----EMLLIAK 560
           E +     +GEG +G V K R    G  VA+K    S       +  K     E+ L+ +
Sbjct: 25  EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDD----KMVKKIAMREIKLLKQ 80

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPN---KSLDVF--LFDPTKKRLLGWQARIGIIEG 615
           L+H NLV +L  C ++    L+ E++ +     L++F    D    +   +Q        
Sbjct: 81  LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQ-------- 132

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           I  G+ + H +    IIHRD+K  N+L+ +    K+ DFG AR   
Sbjct: 133 IINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  105 bits (264), Expect = 6e-25
 Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 26/165 (15%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQG-----LEEFKNEMLLIAKL 561
           E +    KLGEG +  VYKG+  L    VA+K +  +  +G     + E      L+  L
Sbjct: 2   ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVS----LLKDL 57

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPN---KSLDV--FLFDPTKKRLLGWQARIGIIEGI 616
           +H N+V +      +    L+ EY+     + LD    + +    +L  +Q        +
Sbjct: 58  KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQ--------L 109

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
            +GL Y H     +++HRDLK  N+L++     K++DFGLAR   
Sbjct: 110 LRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKS 151

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  105 bits (263), Expect = 6e-25
 Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 19/179 (10%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHR 564
              F +   +G G +G VYKGR +  G+  A+K +   +G   EE K E+ ++ K   HR
Sbjct: 23  AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHR 81

Query: 565 NLVRILGCCIEQGEKI------LILEYMPNKSL-DVFLFDPTKKRLLGWQARIGII-EGI 616
           N+    G  I++          L++E+    S+ D  L   TK   L  +  I  I   I
Sbjct: 82  NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD--LIKNTKGNTLK-EEWIAYICREI 138

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            +GL +LH   + ++IHRD+K  NVLL  +   K+ DFG++        + NT   +GT
Sbjct: 139 LRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT--FIGT 192

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  104 bits (262), Expect = 6e-25
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 20/156 (12%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLS----SQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           LGEG +G V +          AVK L      +   G    K E+ L+ +L+H+N+++++
Sbjct: 13  LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLV 72

Query: 571 G-CCIEQGEKI-LILEYMPNKSLDVFLFD-PTKKRLLGWQAR---IGIIEGIAQGLLYLH 624
                E+ +K+ +++EY      +  + D   +KR    QA      +I+G+     YLH
Sbjct: 73  DVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAHGYFCQLIDGLE----YLH 126

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
                 I+H+D+K  N+LL      KIS  G+A   
Sbjct: 127 ---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  108 bits (271), Expect = 9e-25
 Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 18/170 (10%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKLQHRNL 566
            + M+ +LG GGFG V +      GE+VA+K+   +      E +  E+ ++ KL H N+
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV 74

Query: 567 VRILGCCIEQGEKI-------LILEYMPNKSLDVFLFDPTKKRLLG-WQARIGIIEGIAQ 618
           V       +  +K+       L +EY     L  +L        L     R  ++  I+ 
Sbjct: 75  VSAR-EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISS 132

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGLARMFGGDEL 665
            L YLH     RIIHRDLK  N++L      +  KI D G A+     EL
Sbjct: 133 ALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  105 bits (263), Expect = 1e-24
 Identities = 37/183 (20%), Positives = 75/183 (40%), Gaps = 29/183 (15%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLS-----------------SQSGQGLEE 550
            ++ +   L +G F  +      + +  A+K+                          ++
Sbjct: 31  NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89

Query: 551 FKNEMLLIAKLQHRNLVRILGCCIEQGEKI-LILEYMPNKSL------DVFLFDPTKKRL 603
           FKNE+ +I  +++   +   G  I   +++ +I EYM N S+         L       +
Sbjct: 90  FKNELQIITDIKNEYCLTCEGI-ITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148

Query: 604 LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
                +  II+ +     Y+H  +   I HRD+K SN+L+D++   K+SDFG +      
Sbjct: 149 PIQVIKC-IIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205

Query: 664 ELQ 666
           +++
Sbjct: 206 KIK 208

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  102 bits (256), Expect = 3e-24
 Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 14/156 (8%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS----SQSGQGLEEFKNEMLLIAKLQ 562
           E+F +   LG+G FG VY  R   +   +A+K L      ++G    + + E+ + + L+
Sbjct: 9   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGV-EHQLRREVEIQSHLR 67

Query: 563 HRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           H N++R+ G       ++ LILEY P  ++  +       +    +     I  +A  L 
Sbjct: 68  HPNILRLYGY-FHDATRVYLILEYAPLGTV--YRELQKLSKFDEQRTAT-YITELANALS 123

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
           Y H     R+IHRD+K  N+LL      KI+DFG +
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS 156

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  104 bits (260), Expect = 3e-24
 Identities = 25/224 (11%), Positives = 49/224 (21%), Gaps = 39/224 (17%)

Query: 474 TRPNEFSEANGDRRDKSKDSW---LPLFSLASVAAATENFSMECKLGEGGFGPVYKGR-L 529
            R     E        +   W         + ++       +   L  G    V+  R +
Sbjct: 25  CREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGERKLKLVEPLRVGDRSVVFLVRDV 84

Query: 530 LNGEEVAVKRL---SSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC------------- 573
              E+ A+K     +  S   LE         A+L   +                     
Sbjct: 85  ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQS 144

Query: 574 -------------IEQGEKILILEYMP---NKSLDVFLFDPTKKRLLGWQARIGIIEGIA 617
                              +L++               F    +   G  A   +   + 
Sbjct: 145 QPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLI 204

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           +    L       ++H      N+ +  D    + D       G
Sbjct: 205 RLAANLQSK---GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVG 245

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  102 bits (256), Expect = 3e-24
 Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 26/180 (14%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEML-----LIAKL 561
           ++     +LG G +G V K R + +G+ +AVKR+ +       + +  +L      +  +
Sbjct: 7   DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN---SQEQKRLLMDLDISMRTV 63

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG------IIEG 615
                V   G    +G+  + +E M + SLD F      K+++     I       I   
Sbjct: 64  DCPFTVTFYGALFREGDVWICMELM-DTSLDKFY-----KQVIDKGQTIPEDILGKIAVS 117

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           I + L +LH  S+  +IHRD+K SNVL++     K+ DFG++     D++  +     G 
Sbjct: 118 IVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDDVAKDID--AGC 172

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  103 bits (259), Expect = 5e-24
 Identities = 38/189 (20%), Positives = 68/189 (35%), Gaps = 18/189 (9%)

Query: 499 SLASVAAATENFSMECKLGEG--GFGPVYKGR-LLNGEEVAVKR--LSSQSGQGLEEFKN 553
            ++S       + +   +G+G      V   R    GE V V+R  L + S + +   + 
Sbjct: 16  GMSSFLPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQG 75

Query: 554 EMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSL-DVFLFDPTKKRLLGWQARIGI 612
           E+ +     H N+V      I   E  ++  +M   S  D  L        +  +  I  
Sbjct: 76  ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKD--LICTHFMDGMN-ELAIAY 132

Query: 613 I-EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT-- 669
           I +G+ + L Y+H       +HR +KAS++L+  D    +S             +     
Sbjct: 133 ILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVH 189

Query: 670 ---KRIVGT 675
              K  V  
Sbjct: 190 DFPKYSVKV 198

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  102 bits (257), Expect = 6e-24
 Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 41/177 (23%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN--------EMLLI 558
             +    K+G+G FG V+K R    G++VA+K++       +E  K         E+ ++
Sbjct: 17  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKIL 70

Query: 559 AKLQHRNLVRILGCCIEQGEKI--------LILEYMPN------KSLDVFLFDPTKKRLL 604
             L+H N+V ++  C  +            L+ ++  +       ++ V       KR++
Sbjct: 71  QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM 130

Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
                      +  GL Y+H     +I+HRD+KA+NVL+ RD   K++DFGLAR F 
Sbjct: 131 -QM--------LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFS 175

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  101 bits (254), Expect = 7e-24
 Identities = 41/172 (23%), Positives = 62/172 (36%), Gaps = 13/172 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKL-QH 563
           ++F    +LG G +G V+K R   +G   AVK      +  +       E+    K+ QH
Sbjct: 57  QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
              VR+     E G   L  E     SL           L   Q    + +     L +L
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEA-WGASLPEAQVWGYLRD-TLLALAHL 173

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H      ++H D+K +N+ L      K+ DFGL    G        +   G 
Sbjct: 174 HSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA---GEVQEGD 219

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  101 bits (253), Expect = 8e-24
 Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 11/165 (6%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQG---LEEFKNEMLLIAKLQHRNLVRIL 570
           KLG GG   VY     +   +VA+K +     +    L+ F+ E+   ++L H+N+V ++
Sbjct: 18  KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
               E     L++EY+   +L  ++        L     I     I  G+ + H     R
Sbjct: 78  DVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAH---DMR 131

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           I+HRD+K  N+L+D +   KI DFG+A+      L   T  ++GT
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-QTNHVLGT 175

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  100 bits (252), Expect = 1e-23
 Identities = 43/193 (22%), Positives = 69/193 (35%), Gaps = 33/193 (17%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKR--LSSQSGQGLEEFKNEMLLIAKL-Q 562
           T  F    K+G G FG V+K    L+G   A+KR           +    E+   A L Q
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG-IAQGLL 621
           H ++VR      E    ++  EY    SL   + +  +      +A +  +   + +GL 
Sbjct: 70  HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNP-------------------KISDFGLARMFGG 662
           Y+H      ++H D+K SN+ + R   P                   KI D G       
Sbjct: 130 YIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI-- 184

Query: 663 DELQGNTKRIVGT 675
                + +   G 
Sbjct: 185 ----SSPQVEEGD 193

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  102 bits (257), Expect = 1e-23
 Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 45/175 (25%)

Query: 514 CKLGEGGFGPVYKGR---LLNGEEVAVKRLS----SQSGQGLEEFKNEMLLIAKLQHRNL 566
           CK+G G +G VYK +     + ++ A+K++     S S         E+ L+ +L+H N+
Sbjct: 27  CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR------EIALLRELKHPNV 80

Query: 567 VRILGCCIEQGEKI--LILEYM--------------PNKSLDVFLFDPTKKRLLGWQARI 610
           + +    +   ++   L+ +Y                     V L     K LL +Q   
Sbjct: 81  ISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLL-YQ--- 136

Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP----KISDFGLARMFG 661
                I  G+ YLH      ++HRDLK +N+L+  +       KI+D G AR+F 
Sbjct: 137 -----ILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 183

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  101 bits (253), Expect = 1e-23
 Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 22/160 (13%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEML-----LIAKL 561
           E+     ++G G +G V K     +G+ +AVKR+ S      E+ + ++L     ++   
Sbjct: 22  EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSS 78

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG------IIEG 615
               +V+  G    +G+  + +E M + S D F     K         I       I   
Sbjct: 79  DCPYIVQFYGALFREGDCWICMELM-STSFDKFY----KYVYSVLDDVIPEEILGKITLA 133

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG 655
             + L +L      +IIHRD+K SN+LLDR  N K+ DFG
Sbjct: 134 TVKALNHLK--ENLKIIHRDIKPSNILLDRSGNIKLCDFG 171

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  102 bits (255), Expect = 2e-23
 Identities = 29/194 (14%), Positives = 58/194 (29%), Gaps = 38/194 (19%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH-------- 563
           LG+       +      GE   V             +++ K E+L +  L+         
Sbjct: 86  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 145

Query: 564 --------RNLVRILGCC-----IEQGEKILILEY---MPNKSLDVFLF------DPTKK 601
                    +LV+                + +L      P    ++  F        +  
Sbjct: 146 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 205

Query: 602 RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           + L   AR+ +   + + L  LHHY    ++H  L+  +++LD+     ++ F       
Sbjct: 206 KSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD- 261

Query: 662 GDELQGNTKRIVGT 675
           G        R    
Sbjct: 262 GASAVSPIGRGFAP 275

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  102 bits (255), Expect = 2e-23
 Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 34/183 (18%)

Query: 507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHRN 565
              ++    +G G FG V++ +L+  +EVA+K++        + FKN E+ ++  ++H N
Sbjct: 39  EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPN 93

Query: 566 LVRILGCCIEQGEKI------LILEYMP---NKSLDVFL-----FDPTKKRLLGWQARIG 611
           +V +       G+K       L+LEY+P    ++   +            +L  +Q    
Sbjct: 94  VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ---- 149

Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP-KISDFGLARMFGGDELQGNTK 670
               + + L Y+H      I HRD+K  N+LLD      K+ DFG A++      + N  
Sbjct: 150 ----LLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL--IAGEPNVS 200

Query: 671 RIV 673
            I 
Sbjct: 201 YIC 203

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 99.6 bits (249), Expect = 3e-23
 Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 33/177 (18%)

Query: 506 ATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKN----EMLLI 558
           AT  +    ++G G +G VYK R   +G  VA+K  R+ +  G G          E+ L+
Sbjct: 7   ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGG-GGGGLPISTVREVALL 65

Query: 559 AKLQ---HRNLVRILGCCIEQGEKI-----LILEYMPN------KSLDVFLFDPTKKRLL 604
            +L+   H N+VR++  C            L+ E++                     + L
Sbjct: 66  RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125

Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
             Q          +GL +LH      I+HRDLK  N+L+      K++DFGLAR++ 
Sbjct: 126 MRQ--------FLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYS 171

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  101 bits (253), Expect = 4e-23
 Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 18/175 (10%)

Query: 509 NFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEM-LLIAKLQHRNLV 567
           +F  +  LG G  G +    + +  +VAVKR+  +          E+ LL    +H N++
Sbjct: 25  SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVI 81

Query: 568 RILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           R   C  +  +   + +E     +L  ++        LG +    +++    GL +LH  
Sbjct: 82  RYF-CTEKDRQFQYIAIELCA-ATLQEYVEQK-DFAHLGLEPIT-LLQQTTSGLAHLHSL 137

Query: 627 SRFRIIHRDLKASNVLL-----DRDMNPKISDFGLARMFGGDEL-QGNTKRIVGT 675
               I+HRDLK  N+L+        +   ISDFGL +              + GT
Sbjct: 138 ---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGT 189

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 98.4 bits (246), Expect = 6e-23
 Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 18/167 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS----SQSGQGLEEFKNEMLLIAKLQ 562
           ++F +   LG+G FG VY  R   N   +A+K L      + G    + + E+ + + L+
Sbjct: 14  DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV-EHQLRREIEIQSHLR 72

Query: 563 HRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKK--RLLGWQARIGIIEGIAQG 619
           H N++R+        ++I L+LE+ P   L    +   +K  R    ++    +E +A  
Sbjct: 73  HPNILRMYNY-FHDRKRIYLMLEFAPRGEL----YKELQKHGRFDEQRSAT-FMEELADA 126

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
           L Y H     ++IHRD+K  N+L+      KI+DFG +        +
Sbjct: 127 LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR 170

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 98.0 bits (245), Expect = 7e-23
 Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 20/168 (11%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           LGEG +G V      +  E VAVK +   ++    E  K E+ +   L H N+V+  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73

Query: 574 IEQGEKI-LILEYMPNKSLDVFLFD--PTKKRLLGWQARIG---IIEGIAQGLLYLHHYS 627
             +G    L LEY     L    FD       +    A+     ++ G+     YLH   
Sbjct: 74  RREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  102 bits (256), Expect = 7e-23
 Identities = 36/173 (20%), Positives = 61/173 (35%), Gaps = 31/173 (17%)

Query: 515 KLGEGGFGPVYKGR--LLNGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKLQHRNLVRILG 571
            +  GG G +Y      +NG  V +K L        +     E   +A++ H ++V+I  
Sbjct: 87  CIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQI-- 144

Query: 572 CCIEQGEKI---------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
                 E           +++EY+  +SL            L     I  +  I   L Y
Sbjct: 145 --FNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK-----LPVAEAIAYLLEILPALSY 197

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           LH      +++ DLK  N++L  +   K+ D G                + GT
Sbjct: 198 LH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS------FGYLYGT 240

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 99.2 bits (248), Expect = 7e-23
 Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 43/179 (24%)

Query: 508 ENFSMECKLGEGGFGPVYKGR--LLNGEEVAVKRLSSQSGQGLEEFKN--------EMLL 557
           + +    ++GEG +G V+K R     G  VA+KR+       ++  +         E+ +
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR------VQTGEEGMPLSTIREVAV 64

Query: 558 IAKLQ---HRNLVRIL----GCCIEQGEKI-LILEYMPN--KSL-----DVFLFDPTKKR 602
           +  L+   H N+VR+         ++  K+ L+ E++     +      +  +   T K 
Sbjct: 65  LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124

Query: 603 LLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           ++ +Q        + +GL +LH +   R++HRDLK  N+L+      K++DFGLAR++ 
Sbjct: 125 MM-FQ--------LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =   99 bits (249), Expect = 7e-23
 Identities = 41/186 (22%), Positives = 77/186 (41%), Gaps = 15/186 (8%)

Query: 478 EFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVA 536
           +  E   D + + +                ++F    +LG G  G V+K     +G  +A
Sbjct: 3   KLEELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA 62

Query: 537 VKRLSSQSGQGLEEFK---NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDV 593
            K +  +             E+ ++ +     +V   G     GE  + +E+M   SLD 
Sbjct: 63  RKLIHLEIKP--AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQ 120

Query: 594 FL--FDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI 651
            L       +++LG      +   + +GL YL    + +I+HRD+K SN+L++     K+
Sbjct: 121 VLKKAGRIPEQILG-----KVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKL 173

Query: 652 SDFGLA 657
            DFG++
Sbjct: 174 CDFGVS 179

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  100 bits (250), Expect = 1e-22
 Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 33/175 (18%)

Query: 507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHR 564
             +++    +G G FG VY+ +L  +GE VA+K++        + FKN E+ ++ KL H 
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHC 107

Query: 565 NLVRILGCCIEQGEKI------LILEYMP---NKSLDVFL-----FDPTKKRLLGWQARI 610
           N+VR+       GEK       L+L+Y+P    +    +            +L  +Q   
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ--- 164

Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP-KISDFGLARMFGGDE 664
                + + L Y+H    F I HRD+K  N+LLD D    K+ DFG A+     E
Sbjct: 165 -----LFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 99.9 bits (249), Expect = 2e-22
 Identities = 48/188 (25%), Positives = 70/188 (37%), Gaps = 31/188 (16%)

Query: 510 FSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEM-LLIAKLQHRNLVR 568
              E  LG G  G V       G  VAVKR+        +    E+ LL     H N++R
Sbjct: 17  VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIR 73

Query: 569 ILGCCIEQGEKI-LILEYMPNKSLDVFL-----FDPTKKRLLGWQARIGIIEGIAQGLLY 622
              C       + + LE   N +L   +      D   K    +     ++  IA G+ +
Sbjct: 74  YY-CSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPIS-LLRQIASGVAH 130

Query: 623 LHHYSRFRIIHRDLKASNVLLD-------------RDMNPKISDFGLARMFGGDE--LQG 667
           LH     +IIHRDLK  N+L+               ++   ISDFGL +     +   + 
Sbjct: 131 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187

Query: 668 NTKRIVGT 675
           N     GT
Sbjct: 188 NLNNPSGT 195

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 97.4 bits (243), Expect = 2e-22
 Identities = 53/168 (31%), Positives = 75/168 (44%), Gaps = 20/168 (11%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC 573
           LGEG +G V      +  E VAVK +   ++    E  K E+ +   L H N+V+  G  
Sbjct: 15  LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH- 73

Query: 574 IEQGEKI-LILEYMPNKSLDVFLFD--PTKKRLLGWQARIG---IIEGIAQGLLYLHHYS 627
             +G    L LEY     L    FD       +    A+     ++ G+     YLH   
Sbjct: 74  RREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVV----YLH--- 122

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 97.1 bits (242), Expect = 4e-22
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 16/167 (9%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVK-----RLSSQS---GQGLEEFKNEMLLIA 559
            +S    LG G FG V+        +EV VK     ++          L +   E+ +++
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 560 KLQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           +++H N++++L    E      L++E   +  LD+F F     RL    A   I   +  
Sbjct: 85  RVEHANIIKVLDI-FENQGFFQLVMEKHGS-GLDLFAFIDRHPRLDEPLAS-YIFRQLVS 141

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
            + YL       IIHRD+K  N+++  D   K+ DFG A      +L
Sbjct: 142 AVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL 185

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 97.0 bits (242), Expect = 4e-22
 Identities = 52/156 (33%), Positives = 79/156 (50%), Gaps = 15/156 (9%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHRNLVRILGC 572
           +G+G F  V   R +L G EVA+K +  +  +   L++   E+ ++  L H N+V++   
Sbjct: 23  IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82

Query: 573 CIEQGEKI-LILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
            IE  + + LI+EY     +    FD      R+   +AR      I   + Y H   + 
Sbjct: 83  -IETEKTLYLIMEYASGGEV----FDYLVAHGRMKEKEAR-SKFRQIVSAVQYCH---QK 133

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
           RI+HRDLKA N+LLD DMN KI+DFG +  F     
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 95.8 bits (239), Expect = 7e-22
 Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 15/170 (8%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQG---LEEFKNEMLLIAKLQHRNLVRIL 570
            LG GG   V+  R L +  +VAVK L +   +       F+ E    A L H  +V + 
Sbjct: 19  ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78

Query: 571 --GCCIEQGEKI--LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
             G        +  +++EY+   +L   +     +  +  +  I +I    Q L + H  
Sbjct: 79  DTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFSH-- 133

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQG-NTKRIVGT 675
            +  IIHRD+K +N+++      K+ DFG+AR           T  ++GT
Sbjct: 134 -QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 96.2 bits (239), Expect = 1e-21
 Identities = 28/180 (15%), Positives = 56/180 (31%), Gaps = 37/180 (20%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSS---QSGQGLEEFKNEMLLIAKLQ--------- 562
           LG+       +      GE   V             +++ K E+L +  L+         
Sbjct: 81  LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 140

Query: 563 ----------------HRNLVRILGCC-IEQGEKILILEYMPNKSLDVF---LFD-PTKK 601
                            + ++R+              L      +L  F   L    +  
Sbjct: 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 200

Query: 602 RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           + L   AR+ +   + + L  LHHY    ++H  L+  +++LD+     ++ F      G
Sbjct: 201 KSLVHHARLQLTLQVIRLLASLHHY---GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG 257

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 94.6 bits (236), Expect = 1e-21
 Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 28/183 (15%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHR 564
            + F  + KLG G FG V+      +G E  +K ++  +S   +E+ + E+ ++  L H 
Sbjct: 21  DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIG---------IIEG 615
           N+++I     +     +++E      L     +    R++  QAR           +++ 
Sbjct: 81  NIIKIFEVFEDYHNMYIVMETCEGGEL----LE----RIVSAQARGKALSEGYVAELMKQ 132

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRI 672
           +   L Y H      ++H+DLK  N+L          KI DFGLA +F  DE        
Sbjct: 133 MMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNA 186

Query: 673 VGT 675
            GT
Sbjct: 187 AGT 189

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 94.6 bits (236), Expect = 2e-21
 Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 13/166 (7%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQG---LEEFKNEMLLIAKLQHRNLVRIL 570
            +G GG G VY+    +    VA+K +S             + E     +LQ  ++V I 
Sbjct: 41  LVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIH 100

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
                 G+  + +  +    L   L    ++  L     + I+  I   L   H      
Sbjct: 101 DFGEIDGQLYVDMRLINGVDLAAML---RRQGPLAPPRAVAIVRQIGSALDAAH---AAG 154

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL-QGNTKRIVGT 675
             HRD+K  N+L+  D    + DFG+A     ++L Q      VGT
Sbjct: 155 ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN--TVGT 198

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 93.8 bits (234), Expect = 2e-21
 Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 22/160 (13%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVK---RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG G FG V  G   L G +VAVK   R   +S   + + K E+  +   +H +++++  
Sbjct: 19  LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78

Query: 572 CCIEQGEKI-LILEYMPNKSLDVFLFD--PTKKRLLGWQARIG---IIEGIAQGLLYLHH 625
             I       +++EY+    L    FD      R+   +AR     I+  +     Y H 
Sbjct: 79  V-ISTPTDFFMVMEYVSGGEL----FDYICKHGRVEEMEARRLFQQILSAVD----YCH- 128

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
             R  ++HRDLK  NVLLD  MN KI+DFGL+ M    E 
Sbjct: 129 --RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 95.4 bits (237), Expect = 2e-21
 Identities = 32/211 (15%), Positives = 62/211 (29%), Gaps = 33/211 (15%)

Query: 468 LAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKG 527
           L+  +++ PN F         K K               ++   +   LGEG F  VY+ 
Sbjct: 34  LSKPVSSYPNTFEWQCKLPAIKPK---------TEFQLGSKLVYVHHLLGEGAFAQVYEA 84

Query: 528 R------LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL 581
                    N ++  +K     +          M  +        ++     + Q   +L
Sbjct: 85  TQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVL 144

Query: 582 ILEYMPNKSLD---VFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKA 638
           + E     +L        +  +K +         +  +   +  +H      IIH D+K 
Sbjct: 145 VGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR-MLYMIEQVH---DCEIIHGDIKP 200

Query: 639 SNVLL-----------DRDMNPKISDFGLAR 658
            N +L           D      + D G + 
Sbjct: 201 DNFILGNGFLEQDDEDDLSAGLALIDLGQSI 231

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 97.6 bits (243), Expect = 2e-21
 Identities = 42/229 (18%), Positives = 82/229 (35%), Gaps = 15/229 (6%)

Query: 452 RRKCKEKENMETSQDLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFS 511
                E++            I       S    +        + P           +++ 
Sbjct: 101 LIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYD 160

Query: 512 MECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRIL 570
           +  +LG G FG V++      G   A K + +      E  + E+  ++ L+H  LV + 
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLH 220

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
               +  E ++I E+M        LF+    +   +     +  +  + +GL ++H  + 
Sbjct: 221 DAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN- 275

Query: 629 FRIIHRDLKASNVLL-DRDMNP-KISDFGLARMFGGDELQGNTKRIVGT 675
              +H DLK  N++   +  N  K+ DFGL       +   + K   GT
Sbjct: 276 --YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---SVKVTTGT 319

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 95.4 bits (238), Expect = 2e-21
 Identities = 42/179 (23%), Positives = 74/179 (41%), Gaps = 35/179 (19%)

Query: 507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKN----EMLLIAKL 561
            + F +E   G+G FG V  G+    G  VA+K++          F+N     M  +A L
Sbjct: 22  MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-----RFRNRELQIMQDLAVL 76

Query: 562 QHRNLVRILGCCIEQGEK-------ILILEYMP---NKSLDVFLFDPTK-----KRLLGW 606
            H N+V++       GE+        +++EY+P   ++    +            ++  +
Sbjct: 77  HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLF 136

Query: 607 QARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP-KISDFGLARMFGGDE 664
           Q        + + +  LH  S   + HRD+K  NVL++      K+ DFG A+     E
Sbjct: 137 Q--------LIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE 186

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 93.9 bits (234), Expect = 3e-21
 Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 47/185 (25%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLS------------------SQSGQGLEEFKNEML 556
           +G+G +G V       +    A+K LS                  ++   G        +
Sbjct: 21  IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80

Query: 557 L-----IA---KLQHRNLVRILGCCIEQGEK---ILILEYMPNKSLDVFLFD-PTKKRLL 604
                 IA   KL H N+V+ L   ++   +    ++ E +    +     + PT K L 
Sbjct: 81  EQVYQEIAILKKLDHPNVVK-LVEVLDDPNEDHLYMVFELVNQGPV----MEVPTLKPLS 135

Query: 605 GWQARI---GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF- 660
             QAR     +I+GI     YLH     +IIHRD+K SN+L+  D + KI+DFG++  F 
Sbjct: 136 EDQARFYFQDLIKGIE----YLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188

Query: 661 GGDEL 665
           G D L
Sbjct: 189 GSDAL 193

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 93.0 bits (232), Expect = 3e-21
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 17/175 (9%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
            + +++E  +G G +G V            A K++     + ++ FK E+ ++  L H N
Sbjct: 8   NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLLYL 623
           ++R+     +  +  L++E          LF+    K+      A   I++ +   + Y 
Sbjct: 68  IIRLYETFEDNTDIYLVMELCTGGE----LFERVVHKRVFRESDAA-RIMKDVLSAVAYC 122

Query: 624 HHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H      + HRDLK  N L      D   K+ DFGLA  F   ++    +  VGT
Sbjct: 123 HKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM---RTKVGT 171

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 93.1 bits (232), Expect = 4e-21
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 19/177 (10%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQH 563
            E +++ C LG+G FG V K +  +  +E AVK +  +S   +       E+ L+ KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLL 621
            N++++     +     ++ E      L    FD    +KR     A   II+ +  G+ 
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAA-RIIKQVFSGIT 135

Query: 622 YLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           Y+H   +  I+HRDLK  N+LL   ++D + KI DFGL+  F  +      K  +GT
Sbjct: 136 YMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK---MKDRIGT 186

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 95.6 bits (238), Expect = 6e-21
 Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 22/160 (13%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LG G FG V  G+  L G +VAVK L+ Q   S   + + + E+  +   +H +++++  
Sbjct: 24  LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83

Query: 572 CCIEQGEKI-LILEYMPNKSLDVFLFD--PTKKRLLGWQARIG---IIEGIAQGLLYLHH 625
             I     I +++EY+    L    FD      RL   ++R     I+ G+     Y H 
Sbjct: 84  V-ISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGVD----YCH- 133

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
             R  ++HRDLK  NVLLD  MN KI+DFGL+ M    E 
Sbjct: 134 --RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 93.1 bits (232), Expect = 1e-20
 Identities = 43/184 (23%), Positives = 69/184 (37%), Gaps = 25/184 (13%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK-----RLSSQSGQGLEEFKNEMLLIAK 560
            + + +   +G+G F  V +      G++ AVK     + +S  G   E+ K E  +   
Sbjct: 23  EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHM 82

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGW----QARIGIIE 614
           L+H ++V +L      G   ++ E+M        L      +           A    + 
Sbjct: 83  LKHPHIVELLETYSSDGMLYMVFEFMDGAD----LCFEIVKRADAGFVYSEAVAS-HYMR 137

Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKR 671
            I + L Y H      IIHRD+K   VLL   +     K+  FG+A   G          
Sbjct: 138 QILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES--GLVAGG 192

Query: 672 IVGT 675
            VGT
Sbjct: 193 RVGT 196

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 93.6 bits (233), Expect = 1e-20
 Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 15/174 (8%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
            + + +  +LG G FG V++      G     K +++         KNE+ ++ +L H  
Sbjct: 50  YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLLYL 623
           L+ +     ++ E +LILE++        LFD    +   +     I  +    +GL ++
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKHM 165

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNP--KISDFGLARMFGGDELQGNTKRIVGT 675
           H +    I+H D+K  N++ +       KI DFGLA     DE     K    T
Sbjct: 166 HEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTAT 213

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 93.6 bits (233), Expect = 1e-20
 Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 15/172 (8%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
             S    LG G FG V+K      G ++A K + ++  +  EE KNE+ ++ +L H NL+
Sbjct: 90  TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           ++      + + +L++EY+        LFD    +   L     I  ++ I +G+ ++H 
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGE----LFDRIIDESYNLTELDTILFMKQICEGIRHMHQ 205

Query: 626 YSRFRIIHRDLKASNVLL-DRDMNP-KISDFGLARMFGGDELQGNTKRIVGT 675
                I+H DLK  N+L  +RD    KI DFGLAR +   E     K   GT
Sbjct: 206 M---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVNFGT 251

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 92.7 bits (231), Expect = 1e-20
 Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 23/160 (14%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVK---RLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILG 571
           LGEG FG V         ++VA+K   R   +        + E+  +  L+H +++++  
Sbjct: 17  LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76

Query: 572 CCIEQGEKI-LILEYMPNKSLDVFLFD--PTKKRLLGWQARIG---IIEGIAQGLLYLHH 625
             I     I +++EY   +     LFD    KKR+   + R     II  I     Y H 
Sbjct: 77  V-ITTPTDIVMVIEYAGGE-----LFDYIVEKKRMTEDEGRRFFQQIICAIE----YCH- 125

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
             R +I+HRDLK  N+LLD ++N KI+DFGL+ +      
Sbjct: 126 --RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 94.4 bits (235), Expect = 2e-20
 Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 19/177 (10%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQH 563
            E +++ C LG+G FG V K +  +  +E AVK +  +S   +       E+ L+ KL H
Sbjct: 21  AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLL 621
            N++++     +     ++ E          LFD    +KR     A   II+ +  G+ 
Sbjct: 81  PNIMKLFEILEDSSSFYIVGELYTGGE----LFDEIIKRKRFSEHDAA-RIIKQVFSGIT 135

Query: 622 YLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           Y+H +    I+HRDLK  N+LL   ++D + KI DFGL+  F  +      K  +GT
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM---KDRIGT 186

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 92.0 bits (229), Expect = 2e-20
 Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 16/157 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEML-----LIAKL 561
            +     ++G G  G V+K R    G  +AVK++        +E    +L     ++   
Sbjct: 25  NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN---KEENKRILMDLDVVLKSH 81

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGII-EGIAQGL 620
               +V+  G  I   +  + +E M     +        +  +  +  +G +   I + L
Sbjct: 82  DCPYIVQCFGTFITNTDVFIAMELM-GTCAE--KLKKRMQGPIP-ERILGKMTVAIVKAL 137

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA 657
            YL    +  +IHRD+K SN+LLD     K+ DFG++
Sbjct: 138 YYLK--EKHGVIHRDVKPSNILLDERGQIKLCDFGIS 172

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 94.0 bits (234), Expect = 2e-20
 Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 19/177 (10%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQH 563
           +E +    KLG G +G V   R  +   E A+K +  +S S     +   E+ ++  L H
Sbjct: 36  SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLL 621
            N++++     ++    L++E          LFD    + +     A   II+ +  G+ 
Sbjct: 96  PNIMKLYDFFEDKRNYYLVMECYKGGE----LFDEIIHRMKFNEVDAA-VIIKQVLSGVT 150

Query: 622 YLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           YLH ++   I+HRDLK  N+LL   ++D   KI DFGL+ +F   +     K  +GT
Sbjct: 151 YLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK---KMKERLGT 201

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 91.6 bits (228), Expect = 2e-20
 Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 26/183 (14%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS--------SQSGQGLEEFKNEMLL 557
            + + M   LG G  G V         ++VA+K +S        ++        + E+ +
Sbjct: 9   RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEI 68

Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEG 615
           + KL H  +++I     +  +  ++LE M    L    FD     KRL     +      
Sbjct: 69  LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCK-LYFYQ 122

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRI 672
           +   + YLH      IIHRDLK  NVLL   + D   KI+DFG +++ G   L    + +
Sbjct: 123 MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTL 176

Query: 673 VGT 675
            GT
Sbjct: 177 CGT 179

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 93.2 bits (232), Expect = 2e-20
 Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 26/183 (14%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS--------SQSGQGLEEFKNEMLL 557
            + + M   LG G  G V         ++VA++ +S        ++        + E+ +
Sbjct: 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI 193

Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEG 615
           + KL H  +++I     +  +  ++LE M    L    FD     KRL     ++     
Sbjct: 194 LKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKL-YFYQ 247

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRI 672
           +   + YLH      IIHRDLK  NVLL   + D   KI+DFG +++ G   L    + +
Sbjct: 248 MLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---MRTL 301

Query: 673 VGT 675
            GT
Sbjct: 302 CGT 304

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 90.9 bits (226), Expect = 4e-20
 Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 17/169 (10%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL------SSQSGQGLEEFKNEMLLIAKL 561
            + +   LG GGFG VY G  + +   VA+K +                   E++L+ K+
Sbjct: 44  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103

Query: 562 QHR--NLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
                 ++R+L    E+ +   LILE  P    D+F F   +  L    AR      + +
Sbjct: 104 SSGFSGVIRLLDW-FERPDSFVLILER-PEPVQDLFDFITERGALQEELAR-SFFWQVLE 160

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLARMFGGDELQ 666
            + + H      ++HRD+K  N+L+D +    K+ DFG   +       
Sbjct: 161 AVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT 206

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 90.4 bits (225), Expect = 5e-20
 Identities = 53/199 (26%), Positives = 85/199 (42%), Gaps = 26/199 (13%)

Query: 490 SKDSWLPLFSLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--------RL 540
           ++D+ LP     S     EN+  +  LG G    V +       +E AVK          
Sbjct: 1   TRDAALP--GSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSF 58

Query: 541 SSQSGQGLEE-FKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD- 597
           S++  Q L E    E+ ++ K+  H N++++           L+ + M    L    FD 
Sbjct: 59  SAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL----FDY 114

Query: 598 -PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL 656
              K  L   + R  I+  + + +  LH   +  I+HRDLK  N+LLD DMN K++DFG 
Sbjct: 115 LTEKVTLSEKETR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170

Query: 657 ARMFGGDELQGNTKRIVGT 675
           +      E     + + GT
Sbjct: 171 SCQLDPGEK---LREVCGT 186

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 89.7 bits (223), Expect = 9e-20
 Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 19/170 (11%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL------SSQSGQGLEEFKNE----MLL 557
            + +   LG+GGFG V+ G  L +  +VA+K +                   E      +
Sbjct: 32  EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91

Query: 558 IAKLQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
            A   H  ++R+L    E  E   L+LE  P  + D+F +   K  L    +R      +
Sbjct: 92  GAGGGHPGVIRLLDW-FETQEGFMLVLER-PLPAQDLFDYITEKGPLGEGPSR-CFFGQV 148

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP-KISDFGLARMFGGDEL 665
              + + H      ++HRD+K  N+L+D      K+ DFG   +   +  
Sbjct: 149 VAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY 195

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 92.1 bits (229), Expect = 9e-20
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 20/178 (11%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQ 562
           ++ +  +  LG+G FG V   +  + G+E AVK +S    +     E    E+ L+ +L 
Sbjct: 25  SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGL 620
           H N++++     ++G   L+ E      L    FD   ++KR     A   II  +  G+
Sbjct: 85  HPNIMKLYEFFEDKGYFYLVGEVYTGGEL----FDEIISRKRFSEVDAA-RIIRQVLSGI 139

Query: 621 LYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            Y+H      I+HRDLK  N+LL    +D N +I DFGL+  F   +     K  +GT
Sbjct: 140 TYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM---KDKIGT 191

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 89.2 bits (222), Expect = 1e-19
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 16/174 (9%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
            E + +   LG G FG V++     + +    K +    G      K E+ ++   +HRN
Sbjct: 4   YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK-VKGTDQVLVKKEISILNIARHRN 62

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLLYL 623
           ++ +        E ++I E++        +F+   T    L  +  +  +  + + L +L
Sbjct: 63  ILHLHESFESMEELVMIFEFISGLD----IFERINTSAFELNEREIVSYVHQVCEALQFL 118

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNP--KISDFGLARMFGGDELQGNTKRIVGT 675
           H ++   I H D++  N++     +   KI +FG AR     +     + +   
Sbjct: 119 HSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RLLFTA 166

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 88.4 bits (220), Expect = 1e-19
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 19/177 (10%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQH 563
           ++N+ ++ +LG+G F  V +      G E A K +     S +  ++ + E  +  KLQH
Sbjct: 5   SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLL 621
            N+VR+     E+    L+ + +        LF+    ++      A    I+ I + + 
Sbjct: 65  PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADAS-HCIQQILESIA 119

Query: 622 YLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           Y H      I+HR+LK  N+LL    +    K++DFGLA      E         GT
Sbjct: 120 YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGT 170

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 89.2 bits (222), Expect = 1e-19
 Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 22/181 (12%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK------RLSSQSGQGLEEFKNEMLLIA 559
            + + +  +LG G F  V K R    G E A K        +S+ G   EE + E+ ++ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70

Query: 560 KLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQ 618
           ++ H N++ +      + + +LILE +        LFD   +K  L  +     I+ I  
Sbjct: 71  QVLHHNVITLHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILD 126

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNP----KISDFGLARMFGGDELQGNTKRIVG 674
           G+ YLH     +I H DLK  N++L     P    K+ DFGLA            K I G
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFG 180

Query: 675 T 675
           T
Sbjct: 181 T 181

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 88.4 bits (220), Expect = 2e-19
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 22/181 (12%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK------RLSSQSGQGLEEFKNEMLLIA 559
            +++ M  +LG G F  V K R    G+E A K        SS+ G   EE + E+ ++ 
Sbjct: 4   EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63

Query: 560 KLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQ 618
           +++H N++ +      + + +LILE +        LFD   +K  L        ++ I  
Sbjct: 64  EIRHPNIITLHDIFENKTDVVLILELVSGGE----LFDFLAEKESLTEDEATQFLKQILD 119

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNP----KISDFGLARMFGGDELQGNTKRIVG 674
           G+ YLH     RI H DLK  N++L     P    K+ DFG+A            K I G
Sbjct: 120 GVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN---EFKNIFG 173

Query: 675 T 675
           T
Sbjct: 174 T 174

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 87.9 bits (218), Expect = 2e-19
 Identities = 21/149 (14%), Positives = 48/149 (32%), Gaps = 14/149 (9%)

Query: 515 KLGEGGFGPVYKGR--LLNGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRI 569
             G       ++     L   +VA+  +  Q       L+E  +  L ++++    + R+
Sbjct: 38  FHGGVPPLQFWQALDTAL-DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARV 96

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           L     +   +++ E++   SL                A I  ++ +A      H   R 
Sbjct: 97  LDVVHTRAGGLVVAEWIRGGSLQEVA----DTSPSPVGA-IRAMQSLAAAADAAH---RA 148

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLAR 658
            +       S V +  D +  ++      
Sbjct: 149 GVALSIDHPSRVRVSIDGDVVLAYPATMP 177

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 88.7 bits (220), Expect = 3e-19
 Identities = 42/221 (19%), Positives = 71/221 (32%), Gaps = 60/221 (27%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK-----RLSSQSGQGLEEFKNEMLLIAK 560
            + + ++  +G+G +G V            A+K     ++   + + +E  K E+ L+ K
Sbjct: 25  QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK 84

Query: 561 LQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIG-------- 611
           L H N+ R+     E  + I L++E      L     D     +     +          
Sbjct: 85  LHHPNIARLYEV-YEDEQYICLVMELCHGGHL----LDKLNVFIDDSTGKCAMDVVKTQI 139

Query: 612 ---------------------------------IIEGIAQGLLYLHHYSRFRIIHRDLKA 638
                                            I+  I   L YLH      I HRD+K 
Sbjct: 140 CPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKP 196

Query: 639 SNVLL--DRDMNPKISDFGLARMFGGDELQGNT--KRIVGT 675
            N L   ++    K+ DFGL++ F               GT
Sbjct: 197 ENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGT 237

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 88.6 bits (220), Expect = 3e-19
 Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 22/181 (12%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK------RLSSQSGQGLEEFKNEMLLIA 559
            + + +  +LG G F  V K R    G E A K        +S+ G   EE + E+ ++ 
Sbjct: 11  EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70

Query: 560 KLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQ 618
           ++ H N++ +      + + +LILE +        LFD   +K  L  +     I+ I  
Sbjct: 71  QVLHPNIITLHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILD 126

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNP----KISDFGLARMFGGDELQGNTKRIVG 674
           G+ YLH     +I H DLK  N++L     P    K+ DFGLA            K I G
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE---FKNIFG 180

Query: 675 T 675
           T
Sbjct: 181 T 181

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 88.6 bits (220), Expect = 4e-19
 Identities = 49/238 (20%), Positives = 92/238 (38%), Gaps = 25/238 (10%)

Query: 450 RQRRKCKEKENMETSQDLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATEN 509
           R   +    +  +++  L               N   +    +  LP ++ A      + 
Sbjct: 38  RAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAK--EFYQK 95

Query: 510 FSMECKLGEGGFGPVYKGR-LLNGEEVAVK-------RLSSQSGQGLEE-FKNEMLLIAK 560
           +  +  +G G    V +      G E AVK       RLS +  + + E  + E  ++ +
Sbjct: 96  YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155

Query: 561 L-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIA 617
           +  H +++ ++          L+ + M    L    FD    K  L   + R  I+  + 
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGEL----FDYLTEKVALSEKETR-SIMRSLL 210

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           + + +LH      I+HRDLK  N+LLD +M  ++SDFG +      E     + + GT
Sbjct: 211 EAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK---LRELCGT 262

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 87.6 bits (218), Expect = 4e-19
 Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 38/185 (20%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
            + F     LG G F  V+  +  L G+  A+K +           +NE+ ++ K++H N
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI------------GII 613
           +V +           L+++ +        LFD           RI             +I
Sbjct: 68  IVTLEDIYESTTHYYLVMQLVSGGE----LFD-----------RILERGVYTEKDASLVI 112

Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTK 670
           + +   + YLH      I+HRDLK  N+L    + +    I+DFGL++M     +     
Sbjct: 113 QQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM----S 165

Query: 671 RIVGT 675
              GT
Sbjct: 166 TACGT 170

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 87.7 bits (218), Expect = 5e-19
 Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 22/181 (12%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL------SSQSGQGLEEFKNEMLLIA 559
            + +    +LG G F  V K R    G + A K +      SS+ G   E+ + E+ ++ 
Sbjct: 10  DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69

Query: 560 KLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQ 618
           ++QH N++ +      + + ILILE +        LFD   +K  L  +     ++ I  
Sbjct: 70  EIQHPNVITLHEVYENKTDVILILELVAGGE----LFDFLAEKESLTEEEATEFLKQILN 125

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLL----DRDMNPKISDFGLARMFGGDELQGNTKRIVG 674
           G+ YLH     +I H DLK  N++L          KI DFGLA            K I G
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFG 179

Query: 675 T 675
           T
Sbjct: 180 T 180

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 87.4 bits (217), Expect = 9e-19
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 19/177 (10%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQH 563
           ++N+ ++ +LG+G F  V +      G E A K +     S +  ++ + E  +  KLQH
Sbjct: 28  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLL 621
            N+VR+     E+    L+ + +        LF+    ++      A    I+ I + + 
Sbjct: 88  PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADAS-HCIQQILESIA 142

Query: 622 YLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           Y H      I+HR+LK  N+LL    +    K++DFGLA      E         GT
Sbjct: 143 YCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---WHGFAGT 193

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 87.4 bits (217), Expect = 3e-18
 Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 30/188 (15%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS-------------SQSGQGLEEFK 552
            E++    KLG G +G V   +      E A+K +                  +  EE  
Sbjct: 35  GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94

Query: 553 NEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARI 610
           NE+ L+  L H N++++     ++    L+ E+     L    F+    + +     A  
Sbjct: 95  NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL----FEQIINRHKFDECDAA- 149

Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQG 667
            I++ I  G+ YLH ++   I+HRD+K  N+LL   +  +N KI DFGL+  F  D    
Sbjct: 150 NIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL- 205

Query: 668 NTKRIVGT 675
             +  +GT
Sbjct: 206 --RDRLGT 211

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 84.6 bits (210), Expect = 5e-18
 Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR-NLVRIL 570
           +LG G F  V +      G+E A K  +   +      E  +E+ ++   +    ++ + 
Sbjct: 36  ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95

Query: 571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGW---QARIGIIEGIAQGLLYLHHYS 627
                  E ILILEY     +    F      L         I +I+ I +G+ YLH   
Sbjct: 96  EVYENTSEIILILEYAAGGEI----FSLCLPELAEMVSENDVIRLIKQILEGVYYLH--- 148

Query: 628 RFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           +  I+H DLK  N+LL       + KI DFG++R  G        + I+GT
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC---ELREIMGT 196

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 85.4 bits (212), Expect = 8e-18
 Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 38/187 (20%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQH 563
           TE + +  +LG+G F  V +   +L G+E A   +     S +  ++ + E  +   L+H
Sbjct: 10  TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI------------G 611
            N+VR+     E+G   LI + +        LF+            I             
Sbjct: 70  PNIVRLHDSISEEGHHYLIFDLVTGGE----LFE-----------DIVAREYYSEADASH 114

Query: 612 IIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGN 668
            I+ I + +L+ H      ++HR+LK  N+LL    +    K++DFGLA    G+  Q  
Sbjct: 115 CIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE--QQA 169

Query: 669 TKRIVGT 675
                GT
Sbjct: 170 WFGFAGT 176

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 84.1 bits (208), Expect = 2e-17
 Identities = 44/179 (24%), Positives = 85/179 (47%), Gaps = 41/179 (22%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---------EML 556
            + + +   +G G +G V +    L    VA+K++          F++         E+ 
Sbjct: 52  PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKIL-------RVFEDLIDCKRILREIA 104

Query: 557 LIAKLQHRNLVRILGCCI----EQGEKI-LILEYMPN------KSLDVFLFDPTKKRLLG 605
           ++ +L H ++V++L   I    E+ +++ ++LE   +      ++  V+L +   K LL 
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT-PVYLTELHIKTLL- 162

Query: 606 WQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           +         +  G+ Y+H  S   I+HRDLK +N L+++D + K+ DFGLAR     E
Sbjct: 163 YN--------LLVGVKYVH--SA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE 210

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 82.8 bits (205), Expect = 3e-17
 Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 24/160 (15%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKLQHRNLVRILGCC 573
           +G G FG     R  L  E VAVK +    G  ++E  + E++    L+H N+VR     
Sbjct: 28  IGSGNFGVARLMRDKLTKELVAVKYIER--GAAIDENVQREIINHRSLRHPNIVR-FKEV 84

Query: 574 IEQGEKI-LILEYMPNKSLDVFLFD--PTKKRLLGWQARIG---IIEGIAQGLLYLHHYS 627
           I     + +I+EY     L    ++      R    +AR     ++ G++    Y H   
Sbjct: 85  ILTPTHLAIIMEYASGGEL----YERICNAGRFSEDEARFFFQQLLSGVS----YCH--- 133

Query: 628 RFRIIHRDLKASNVLLDRD--MNPKISDFGLARMFGGDEL 665
             +I HRDLK  N LLD       KI DFG ++       
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 81.5 bits (202), Expect = 4e-17
 Identities = 52/174 (29%), Positives = 73/174 (41%), Gaps = 14/174 (8%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L  +       +     E  ++++L H
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89

Query: 564 RNLVRILGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
              V++      Q ++ L   L Y  N  L    +            R    E I   L 
Sbjct: 90  PFFVKLYFTF--QDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAE-IVSALE 144

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           YLH      IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VGT
Sbjct: 145 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 195

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 81.6 bits (202), Expect = 5e-17
 Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 40/182 (21%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCC 573
           LGEG    V     L+  +E AVK +  Q G        E+ ++ + Q HRN++ ++   
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80

Query: 574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI------------GIIEGIAQGLL 621
            E+    L+ E M   S+                  I             +++ +A  L 
Sbjct: 81  EEEDRFYLVFEKMRGGSI----LS-----------HIHKRRHFNELEASVVVQDVASALD 125

Query: 622 YLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMF-----GGDELQGNTKRIV 673
           +LH+     I HRDLK  N+L    ++    KI DF L                      
Sbjct: 126 FLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182

Query: 674 GT 675
           G+
Sbjct: 183 GS 184

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 80.4 bits (199), Expect = 2e-16
 Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 20/176 (11%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
           T+ + ++  +G G +    +        E AVK +        EE     +L+   QH N
Sbjct: 21  TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE---IEILLRYGQHPN 77

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFD--PTKKRLLGWQARIGIIEGIAQGLLYL 623
           ++ +     +     ++ E M    L     D    +K     +A   ++  I + + YL
Sbjct: 78  IITLKDVYDDGKYVYVVTELMKGGEL----LDKILRQKFFSEREAS-AVLFTITKTVEYL 132

Query: 624 HHYSRFRIIHRDLKASNVLL-DRDMNP---KISDFGLARMFGGDELQGNTKRIVGT 675
           H      ++HRDLK SN+L  D   NP   +I DFG A+    +   G       T
Sbjct: 133 H---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAE--NGLLMTPCYT 183

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 78.9 bits (195), Expect = 5e-16
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 39/185 (21%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
           ++ F +E +LG G    VY+ +     +  A+K L     +  +  + E+ ++ +L H N
Sbjct: 52  SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPN 109

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI------------GII 613
           ++++        E  L+LE +    L    FD           RI              +
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGEL----FD-----------RIVEKGYYSERDAADAV 154

Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTK 670
           + I + + YLH      I+HRDLK  N+L      D   KI+DFGL+++     L    K
Sbjct: 155 KQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL---MK 208

Query: 671 RIVGT 675
            + GT
Sbjct: 209 TVCGT 213

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 79.4 bits (196), Expect = 5e-16
 Identities = 40/207 (19%), Positives = 80/207 (38%), Gaps = 65/207 (31%)

Query: 507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKN-EMLLIAKLQHR 564
           ++ +S+   LG G FG V +   + +G+  A+K++          +KN E+ ++  L H 
Sbjct: 6   SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-----RYKNRELDIMKVLDHV 60

Query: 565 NLVRILGCCIEQGEKI--------------------------------------LILEYM 586
           N+++++      G++                                       +I+EY+
Sbjct: 61  NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120

Query: 587 P---NKSLDVFLFDPTK-----KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKA 638
           P   +K L  F+            +  +Q        + + + ++H      I HRD+K 
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQ--------LFRAVGFIHS---LGICHRDIKP 169

Query: 639 SNVLLDRDMNP-KISDFGLARMFGGDE 664
            N+L++   N  K+ DFG A+     E
Sbjct: 170 QNLLVNSKDNTLKLCDFGSAKKLIPSE 196

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 76.6 bits (189), Expect = 3e-15
 Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 30/174 (17%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNE-MLLIAKLQHRNLVRILGC 572
            LG G  G V +      G++ A+K L         + + E           ++V IL  
Sbjct: 36  VLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDV 90

Query: 573 CIEQGEKI----LILEYMPNKSLDVFLFDPTKKRLLGW----QARIGIIEGIAQGLLYLH 624
                       +I+E M    L    F   ++R        +A   I+  I   + +LH
Sbjct: 91  YENMHHGKRCLLIIMECMEGGEL----FSRIQERGDQAFTEREAA-EIMRDIGTAIQFLH 145

Query: 625 HYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            ++   I HRD+K  N+L    ++D   K++DFG A+    + LQ        T
Sbjct: 146 SHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT----PCYT 192

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 75.8 bits (187), Expect = 4e-15
 Identities = 40/178 (22%), Positives = 68/178 (38%), Gaps = 40/178 (22%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGC 572
            LGEG F    K     + +  AVK +S +        + E+  +   + H N+V++   
Sbjct: 18  PLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEV 74

Query: 573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARI------------GIIEGIAQGL 620
             +Q    L++E +    L    F+           RI             I+  +   +
Sbjct: 75  FHDQLHTFLVMELLNGGEL----FE-----------RIKKKKHFSETEASYIMRKLVSAV 119

Query: 621 LYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            ++H      ++HRDLK  N+L    + ++  KI DFG AR+   D      K    T
Sbjct: 120 SHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPLKTPCFT 172

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 77.1 bits (190), Expect = 7e-15
 Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 13/173 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
             F     LG+GGFG V   ++    ++ A K+L  +     +G     NE  ++ K+  
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243

Query: 564 RNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           R +V  L    E  + + L+L  M    L   ++   +      +A     E I  GL  
Sbjct: 244 RFVVS-LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAE-ICCGLED 301

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           LH   R RI++RDLK  N+LLD   + +ISD GLA      +     K  VGT
Sbjct: 302 LH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---IKGRVGT 348

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 75.3 bits (184), Expect = 9e-15
 Identities = 36/203 (17%), Positives = 61/203 (30%), Gaps = 46/203 (22%)

Query: 502 SVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRL--------SSQSGQGLEEFKN 553
           S    TE      K+GEG FG V++    +   VA+K +        +    +  EE   
Sbjct: 14  SHCLPTEKLQRCEKIGEGVFGEVFQTI-ADHTPVAIKIIAIEGPDLVNGSHQKTFEEILP 72

Query: 554 EMLLIAKLQ---------HRNLVRILGCCIEQGE--KILILEYM--------PNKSLDVF 594
           E+++  +L              + +      QG    +L+  +          N   D F
Sbjct: 73  EIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFF 132

Query: 595 ----------------LFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKA 638
                             +  + +L        I+  +   L         R  HRDL  
Sbjct: 133 KDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA--SLRFEHRDLHW 190

Query: 639 SNVLLDRDMNPKISDFGLARMFG 661
            NVLL +    K+      +   
Sbjct: 191 GNVLLKKTSLKKLHYTLNGKSST 213

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 76.7 bits (189), Expect = 9e-15
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 14/175 (8%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           + F     LG GGFG V+  ++    ++ A K+L+ +     +G +    E  ++AK+  
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244

Query: 564 RNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKK--RLLGWQARIGIIEGIAQGL 620
           R +V  L    E    + L++  M    +   +++  +        +A     + I  GL
Sbjct: 245 RFIVS-LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ-IVSGL 302

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            +LH   +  II+RDLK  NVLLD D N +ISD GLA      +    TK   GT
Sbjct: 303 EHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ--TKTKGYAGT 352

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 75.0 bits (185), Expect = 9e-15
 Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 21/159 (13%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HR 564
            +++ +  KLG G +  V++   + N E+V VK L     +   + K E+ ++  L+   
Sbjct: 35  QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK---KIKREIKILENLRGGP 91

Query: 565 NLVRILGCCIEQGEK--ILILEYMPNKSLDVFL--FDPTKKRLLGWQARIGIIEGIAQGL 620
           N++ +     +   +   L+ E++ N               R   ++        I + L
Sbjct: 92  NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYE--------ILKAL 143

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLAR 658
            Y H  S   I+HRD+K  NV++D +    ++ D+GLA 
Sbjct: 144 DYCH--SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 75.0 bits (185), Expect = 1e-14
 Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 34/180 (18%)

Query: 507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEE--FKN---------EM 555
              ++++  +  G +G V  G    G  VA+KR+ +    G       +         E+
Sbjct: 21  QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80

Query: 556 LLIAKLQHRNLVRILGCCIEQGEKI-----LILEYMPN------KSLDVFLFDPTKKRLL 604
            L+    H N++ +    +   E       L+ E M            + +     +  +
Sbjct: 81  RLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM 140

Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
            +         I  GL  LH      ++HRDL   N+LL  + +  I DF LAR    D 
Sbjct: 141 -YH--------ILLGLHVLH--EA-GVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 74.1 bits (182), Expect = 2e-14
 Identities = 45/234 (19%), Positives = 68/234 (29%), Gaps = 66/234 (28%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRN 565
            +F     +G GGFG V++ +  ++    A+KR+         E+   E+  +AKL+H  
Sbjct: 6   TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 65

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGI------------- 612
           +VR     +E   +    E       D     P           + I             
Sbjct: 66  IVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVG 125

Query: 613 --IEGIAQGLLY----------LHHYSRFRI-----------------------IH---- 633
                  +  LY          L  +   R                        +H    
Sbjct: 126 QLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGL 185

Query: 634 --RDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTK----------RIVGT 675
             RDLK SN+    D   K+ DFGL      DE +                VGT
Sbjct: 186 MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 73.8 bits (181), Expect = 9e-14
 Identities = 52/176 (29%), Positives = 75/176 (42%), Gaps = 19/176 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNE--ML-LIAK 560
            +FS+   +G GGFG VY  R    G+  A+K L  +     QG     NE  ML L++ 
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248

Query: 561 LQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG 619
                +V  +       +K+  IL+ M    L   L             R    E I  G
Sbjct: 249 GDCPFIVC-MSYAFHTPDKLSFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAE-IILG 304

Query: 620 LLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           L ++H      +++RDLK +N+LLD   + +ISD GLA  F   +        VGT
Sbjct: 305 LEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----PHASVGT 353

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 71.6 bits (176), Expect = 2e-13
 Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 38/176 (21%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---------EML 556
            + +     +G G +G V       +GE+VA+K+LS         F++         E+L
Sbjct: 23  PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS-------RPFQSEIFAKRAYRELL 75

Query: 557 LIAKLQHRNLVRIL-----GCCIEQGEKI-LILEYMP---NKSLDVFLFDPTKKRLLGWQ 607
           L+  +QH N++ +L        +       L++ +M     K + +   +   + L+ +Q
Sbjct: 76  LLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV-YQ 134

Query: 608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
                   + +GL Y+H  S   ++HRDLK  N+ ++ D   KI DFGLAR    +
Sbjct: 135 --------MLKGLKYIH--SA-GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 72.1 bits (177), Expect = 2e-13
 Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 41/179 (22%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---------EML 556
            +N+ ++  +G G +G VY        + VA+K+++         F++         E+ 
Sbjct: 25  PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR-------MFEDLIDCKRILREIT 77

Query: 557 LIAKLQHRNLVRILGCCIEQGEKI-----LILEYMPN------KSLDVFLFDPTKKRLLG 605
           ++ +L+   ++R+    I           ++LE   +      K+  +FL +   K +L 
Sbjct: 78  ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT-PIFLTEEHIKTIL- 135

Query: 606 WQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
           +         +  G  ++H      IIHRDLK +N LL++D + K+ DFGLAR    ++
Sbjct: 136 YN--------LLLGENFIH--ES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 71.7 bits (176), Expect = 2e-13
 Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 29/174 (16%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNE-MLLIAKLQHRNLVRILGC 572
            LG G  G V +       E+ A+K L         + + E  L     Q  ++VRI+  
Sbjct: 69  VLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDV 123

Query: 573 CIEQGEKI----LILEYMPNKSLDVFLFDPTKKRLLGW----QARIGIIEGIAQGLLYLH 624
                       +++E +    L    F   + R        +A   I++ I + + YLH
Sbjct: 124 YENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH 178

Query: 625 HYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             +   I HRD+K  N+L      +   K++DFG A+         +      T
Sbjct: 179 SIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---SLTTPCYT 226

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 70.0 bits (172), Expect = 5e-13
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 37/176 (21%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---------EML 556
              ++    +GEG +G V      LN   VA+K++S         F++         E+ 
Sbjct: 26  GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP--------FEHQTYCQRTLREIK 77

Query: 557 LIAKLQHRNLVRILGC----CIEQGEKI-LILEYMP---NKSLDVFLFDPTKKRLLGWQA 608
           ++ + +H N++ I        IEQ + + ++ + M     K L              +Q 
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ- 136

Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                  I +GL Y+H  S   ++HRDLK SN+LL+   + KI DFGLAR+   D 
Sbjct: 137 -------ILRGLKYIH--SA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 64.5 bits (157), Expect = 6e-13
 Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 19/126 (15%)

Query: 27  DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISD 86
           + +T    +  G+ L      +              L ++      T VW +N       
Sbjct: 2   NLLTNGEGLYAGQSLDVE--PYHFIMQEDCN-----LVLYDH---STSVWASNTGIL-GK 50

Query: 87  HNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYL 146
                 + ++G  V+ +    ++W++++     N V  L++DGN+VI  +         +
Sbjct: 51  KGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD--------I 102

Query: 147 WQSFDY 152
           W +  Y
Sbjct: 103 WSTGTY 108

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 68.9 bits (169), Expect = 1e-12
 Identities = 39/165 (23%), Positives = 64/165 (38%), Gaps = 27/165 (16%)

Query: 509 NFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           NF +  K+G G FG +  G+ L   E VA+K    +S       +             + 
Sbjct: 10  NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLG-SGDGIP 68

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL-------LGWQARIGIIEGIAQGL 620
           ++           ++LE +   SL+  LFD   +         +  Q  I  +E      
Sbjct: 69  QVYYFGPCGKYNAMVLELL-GPSLE-DLFDLCDRTFSLKTVLMIAIQL-ISRME------ 119

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPK-----ISDFGLARMF 660
            Y+H  +   +I+RD+K  N L+ R  N       I DF LA+ +
Sbjct: 120 -YVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 68.5 bits (168), Expect = 1e-12
 Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 48/186 (25%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---------EML 556
              +     LG GG G V+        + VA+K++            +         E+ 
Sbjct: 10  GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---------LTDPQSVKHALREIK 60

Query: 557 LIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-----------------FDPT 599
           +I +L H N+V++       G ++        +   V++                     
Sbjct: 61  IIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEE 120

Query: 600 KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD-RDMNPKISDFGLAR 658
             RL  +Q        + +GL Y+H  S   ++HRDLK +N+ ++  D+  KI DFGLAR
Sbjct: 121 HARLFMYQ--------LLRGLKYIH--SA-NVLHRDLKPANLFINTEDLVLKIGDFGLAR 169

Query: 659 MFGGDE 664
           +     
Sbjct: 170 IMDPHY 175

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 69.4 bits (170), Expect = 1e-12
 Identities = 41/173 (23%), Positives = 76/173 (43%), Gaps = 12/173 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEE---FKNEMLLIAKLQH 563
           E+F +   +G G FG V   +L N ++V A+K L+        E   F+ E  ++     
Sbjct: 74  EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133

Query: 564 RNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           + +   L    +    + L+++Y     L + L    + RL    AR  + E +   +  
Sbjct: 134 KWITT-LHYAFQDDNNLYLVMDYYVGGDL-LTLLSKFEDRLPEEMARFYLAE-MVIAIDS 190

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           +H   +   +HRD+K  N+L+D + + +++DFG       D     +   VGT
Sbjct: 191 VH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG-TVQSSVAVGT 239

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 68.1 bits (167), Expect = 1e-12
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 26/156 (16%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNE-MLLIAKLQHRNLVRILGC 572
            LG G  G V +       E+ A+K L         + + E  L     Q  ++VRI+  
Sbjct: 25  VLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDV 79

Query: 573 CIEQGEKI----LILEYMPNKSLDVFLFDPTKKRLLGW----QARIGIIEGIAQGLLYLH 624
                       +++E +    L    F   + R        +A   I++ I + + YLH
Sbjct: 80  YENLYAGRKCLLIVMECLDGGEL----FSRIQDRGDQAFTEREAS-EIMKSIGEAIQYLH 134

Query: 625 HYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLA 657
             +   I HRD+K  N+L      +   K++DFG A
Sbjct: 135 SIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFA 167

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 68.4 bits (167), Expect = 2e-12
 Identities = 31/160 (19%), Positives = 55/160 (34%), Gaps = 19/160 (11%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQSGQG-LEEFKNEMLLIAK 560
           +   +   LG G FG V +              VAVK L   +         +E+ ++  
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81

Query: 561 L-QHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           +  H N+V +LG C + G  + +I+E+    +L  +L             R   +    +
Sbjct: 82  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL----------RSKRNEFVPYKTK 131

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           G  +         I  DLK     +    +   S F   +
Sbjct: 132 GARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 54.9 bits (132), Expect = 3e-08
 Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 3/43 (6%)

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
           +A+G+ +L   +  + IHRDL A N+LL      KI DFGLAR
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 241

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 68.7 bits (168), Expect = 2e-12
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 38/177 (21%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---------EML 556
            + +     +G G  G V      +    VA+K+LS         F+N         E++
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS-------RPFQNQTHAKRAYRELV 113

Query: 557 LIAKLQHRNLVRIL-----GCCIEQGEKI-LILEYMP---NKSLDVFLFDPTKKRLLGWQ 607
           L+  + H+N++ +L        +E+ + + L++E M     + + + L       LL +Q
Sbjct: 114 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLL-YQ 172

Query: 608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                   +  G+ +LH  S   IIHRDLK SN+++  D   KI DFGLAR  G   
Sbjct: 173 --------MLCGIKHLH--SA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 218

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 67.0 bits (164), Expect = 3e-12
 Identities = 35/168 (20%), Positives = 74/168 (44%), Gaps = 31/168 (18%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
            ++ +  ++GEG FG +++G  LLN ++VA+K     S + Q  +E++   LL       
Sbjct: 10  VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGC---T 66

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL-------LGWQARIGIIEGIA 617
            +  +     E    +L+++ +   SL+  L D   ++           Q  +  ++   
Sbjct: 67  GIPNVYYFGQEGLHNVLVIDLLG-PSLE-DLLDLCGRKFSVKTVAMAAKQM-LARVQ--- 120

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPK-----ISDFGLARMF 660
                +H  S   +++RD+K  N L+ R  +       + DFG+ + +
Sbjct: 121 ----SIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 67.0 bits (164), Expect = 3e-12
 Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 27/165 (16%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH-RN 565
             + +  K+G G FG +Y G  +  GEEVA+K    ++         E  +   +Q    
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ--LHIESKIYKMMQGGVG 66

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL-------LGWQARIGIIEGIAQ 618
           +  I  C  E    ++++E +   SL+  LF+   ++        L  Q  I  IE    
Sbjct: 67  IPTIRWCGAEGDYNVMVMELL-GPSLE-DLFNFCSRKFSLKTVLLLADQM-ISRIE---- 119

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPK---ISDFGLARMF 660
              Y+H  +    IHRD+K  N L+          I DFGLA+ +
Sbjct: 120 ---YIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 67.8 bits (166), Expect = 3e-12
 Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 38/178 (21%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---------EML 556
            + +     +G G  G V      +    VA+K+LS         F+N         E++
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLS-------RPFQNQTHAKRAYRELV 76

Query: 557 LIAKLQHRNLVRIL-----GCCIEQGEKI-LILEYMP---NKSLDVFLFDPTKKRLLGWQ 607
           L+  + H+N++ +L        +E+ + + +++E M     + + + L       LL +Q
Sbjct: 77  LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLL-YQ 135

Query: 608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
                   +  G+ +LH  S   IIHRDLK SN+++  D   KI DFGLAR  G   +
Sbjct: 136 --------MLCGIKHLH--SA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 182

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 67.8 bits (166), Expect = 4e-12
 Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 20/237 (8%)

Query: 449 CRQRRKCKEKENMETSQDLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFS-----LASV 503
             +          E + D L   +     +       R++K+ D++L  +      +  +
Sbjct: 6   FEKMDNLLRDPKSEVNSDCLLDGLDALVYDLDFPA-LRKNKNIDNFLSRYKDTINKIRDL 64

Query: 504 AAATENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEE---FKNEMLLIA 559
               E++ +   +G G FG V   R  +  +V A+K LS        +   F  E  ++A
Sbjct: 65  RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 124

Query: 560 KLQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
                 +V+ L    +    + +++EYMP   L   +   +   +    AR    E +  
Sbjct: 125 FANSPWVVQ-LFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKWARFYTAE-VVL 179

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            L  +H       IHRD+K  N+LLD+  + K++DFG       + +       VGT
Sbjct: 180 ALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR-CDTAVGT 232

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 67.4 bits (165), Expect = 4e-12
 Identities = 40/173 (23%), Positives = 74/173 (42%), Gaps = 12/173 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           ++F +   +G G F  V   ++    +V A+K ++         +  F+ E  ++     
Sbjct: 61  DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120

Query: 564 RNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           R + + L    +    + L++EY     L + L     +R+    AR  + E I   +  
Sbjct: 121 RWITQ-LHFAFQDENYLYLVMEYYVGGDL-LTLLSKFGERIPAEMARFYLAE-IVMAIDS 177

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           +H   R   +HRD+K  N+LLDR  + +++DFG       D     +   VGT
Sbjct: 178 VH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR-SLVAVGT 226

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 66.5 bits (163), Expect = 7e-12
 Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 37/172 (21%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---------EML 556
           + +F ++  LGEG +G V        GE VA+K++          F           E+ 
Sbjct: 10  SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP--------FDKPLFALRTLREIK 61

Query: 557 LIAKLQHRNLVRILGCCIEQGEKI-----LILEYMP---NKSLDVFLFDPTKKRLLGWQA 608
           ++   +H N++ I         +      +I E M    ++ +   +      +   +Q 
Sbjct: 62  ILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ- 120

Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF 660
                    + +  LH      +IHRDLK SN+L++ + + K+ DFGLAR+ 
Sbjct: 121 -------TLRAVKVLH--GS-NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 66.6 bits (163), Expect = 7e-12
 Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 37/176 (21%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---------EML 556
              +     +G G +G V        G +VA+K+L          F++         E+ 
Sbjct: 24  RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLY-------RPFQSELFAKRAYRELR 76

Query: 557 LIAKLQHRNLVRIL-----GCCIEQGEKI-LILEYMP---NKSLDVFLFDPTKKRLLGWQ 607
           L+  ++H N++ +L        ++      L++ +M     K +        + + L +Q
Sbjct: 77  LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ 136

Query: 608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
                   + +GL Y+H  +   IIHRDLK  N+ ++ D   KI DFGLAR    +
Sbjct: 137 --------MLKGLRYIH--AA-GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 61.0 bits (148), Expect = 1e-11
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 19/123 (15%)

Query: 27  DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISD 86
           ++++  + +  G  L      + L              ++        VW +N     S 
Sbjct: 2   NSLSSPNSLFTGHSL-EVGPSYRLIMQGDCN-----FVLYDS---GKPVWASNTGGLGSG 52

Query: 87  HNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYL 146
               L   NNG LV+ +Q+N  IW T  + +  + V  L+ D N+VI            +
Sbjct: 53  CRLTLH--NNGNLVIYDQSNRVIWQTKTNGKEDHYVLVLQQDRNVVIYGPV--------V 102

Query: 147 WQS 149
           W +
Sbjct: 103 WAT 105

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 66.2 bits (162), Expect = 1e-11
 Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 34/181 (18%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNE----------M 555
              + +  KLG+G +G V+K      GE VAVK++        + F+N           M
Sbjct: 8   LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-------DAFQNSTDAQRTFREIM 60

Query: 556 LLIAKLQHRNLVRILGCCI-EQGEKI-LILEYMP---NKSLDVFLFDPTKKRLLGWQARI 610
           +L     H N+V +L     +    + L+ +YM    +  +   + +P  K+ + +Q   
Sbjct: 61  ILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQ--- 117

Query: 611 GIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTK 670
                + + + YLH  S   ++HRD+K SN+LL+ + + K++DFGL+R F       N  
Sbjct: 118 -----LIKVIKYLH--SG-GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNI 169

Query: 671 R 671
            
Sbjct: 170 P 170

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 65.6 bits (160), Expect = 1e-11
 Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 43/182 (23%)

Query: 509 NFSMECKLGEGGFGPVYKGRLLNGE------EVAVKRLSSQSGQGLEEFKNEMLLIAKLQ 562
            + +   +G+GGFG +Y   + + E         VK   S +G    E K         Q
Sbjct: 36  AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQ 95

Query: 563 HRNLV-----------RILGCCIEQGEK----ILILEYMPNKSLDVFLFDPTKKRL---- 603
            +  +           +  G  +          +I++      L   +++   KR     
Sbjct: 96  IQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQ-KIYEANAKRFSRKT 153

Query: 604 ---LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI--SDFGLAR 658
              L  +  + I+E       Y+H +     +H D+KASN+LL+     ++   D+GLA 
Sbjct: 154 VLQLSLRI-LDILE-------YIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLAY 202

Query: 659 MF 660
            +
Sbjct: 203 RY 204

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 65.0 bits (159), Expect = 2e-11
 Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 37/171 (21%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKN---------EML 556
            E +     +G G +G V        G  VAVK+LS         F++         E+ 
Sbjct: 28  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS-------RPFQSIIHAKRTYRELR 80

Query: 557 LIAKLQHRNLVRIL-----GCCIEQGEKI-LILEYMP---NKSLDVFLFDPTKKRLLGWQ 607
           L+  ++H N++ +L        +E+   + L+   M    N  +          + L +Q
Sbjct: 81  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 140

Query: 608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
                   I +GL Y+H  S   IIHRDLK SN+ ++ D   KI DFGLAR
Sbjct: 141 --------ILRGLKYIH--SA-DIIHRDLKPSNLAVNEDCELKILDFGLAR 180

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 60.3 bits (146), Expect = 2e-11
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 18/124 (14%)

Query: 26  ADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPIS 85
           +D +     +  G  L      +     +        L ++     +  VW +  +    
Sbjct: 1   SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLYDN---NRAVWASGTNGK-- 48

Query: 86  DHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENY 145
               VL + N+G LV+ +  +  IW++N + +  N    L+ D N+VI DNS+     N 
Sbjct: 49  ASGCVLKMQNDGNLVIYSG-SRAIWASNTNRQNGNYYLILQRDRNVVIYDNSN-----NA 102

Query: 146 LWQS 149
           +W +
Sbjct: 103 IWAT 106

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 42.6 bits (100), Expect = 3e-05
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 88  NAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLW 147
             +  I N+  LVL +  N  +W++  + +A   V ++++DGNLVI   S      N   
Sbjct: 20  GYLFIIQNDCNLVLYD-NNRAVWASGTNGKASGCVLKMQNDGNLVIYSGSRAIWASNTNR 78

Query: 148 QSFDY 152
           Q+ +Y
Sbjct: 79  QNGNY 83

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 64.8 bits (158), Expect = 3e-11
 Identities = 25/183 (13%), Positives = 63/183 (34%), Gaps = 43/183 (23%)

Query: 508 ENFSMECKLGEGGFGPVYKGR---------LLNGEEVAVKRLSSQSGQGLEEFK------ 552
             + ++        G +Y+               ++ ++K L ++ G+   E        
Sbjct: 42  RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLK-LDAKDGRLFNEQNFFQRAA 100

Query: 553 --NEMLLIAKLQHRNLV---RILGCCIEQGE-KILILEYMPNKSL-DVFLFDPTKK---- 601
              ++    KL    L+     +G  + Q + + L+L  +  +SL       P       
Sbjct: 101 KPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSER 159

Query: 602 --RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI--SDFGLA 657
               +  +  +  +E       +LH       +H ++ A N+ +D +   ++  + +G A
Sbjct: 160 SVLQVACRL-LDALE-------FLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFA 208

Query: 658 RMF 660
             +
Sbjct: 209 FRY 211

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 64.2 bits (157), Expect = 3e-11
 Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 17/173 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLS----SQSGQGLEEFKNEMLLIAKLQ 562
           + F     LG G FG V   +   +G   A+K L      +  Q +E   NE  ++  + 
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQ-IEHTLNEKRILQAVN 99

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
              LV++     +     +++EY+    +  F       R     AR    + I     Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEM--FSHLRRIGRFSEPHARFYAAQ-IVLTFEY 156

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           LH      +I+RDLK  N+L+D+    +++DFG A+      ++G T  + GT
Sbjct: 157 LHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAK-----RVKGRTWTLCGT 201

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 59.1 bits (143), Expect = 6e-11
 Identities = 21/123 (17%), Positives = 39/123 (31%), Gaps = 20/123 (16%)

Query: 27  DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISD 86
           + +     +     L +    + L   +        L  +        +W +N DR    
Sbjct: 3   NVLLSGQTLHADHSLQAG--AYTLTIQNKCN-----LVKYQN---GRQIWASNTDR--RG 50

Query: 87  HNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYL 146
               LT+ ++G LV+ +  N  +W +    +       L+ DG  VI            L
Sbjct: 51  SGCRLTLLSDGNLVIYDHNNNDVWGSACWGDNGKYALVLQKDGRFVIYGPV--------L 102

Query: 147 WQS 149
           W  
Sbjct: 103 WSL 105

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 63.9 bits (155), Expect = 7e-11
 Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 27/165 (16%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
             F +  K+G G FG +Y G  +   EEVA+K  + ++         E  +   LQ    
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ--LLYESKIYRILQGGTG 64

Query: 567 V-RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL-------LGWQARIGIIEGIAQ 618
           +  +    +E    +L+++ +   SL+  LF+   ++L       L  Q  I  +E    
Sbjct: 65  IPNVRWFGVEGDYNVLVMDLL-GPSLE-DLFNFCSRKLSLKTVLMLADQM-INRVE---- 117

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPK---ISDFGLARMF 660
              ++H  S    +HRD+K  N L+          I DFGLA+ +
Sbjct: 118 ---FVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109

 Score = 57.2 bits (138), Expect = 2e-10
 Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 20/123 (16%)

Query: 27  DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISD 86
           + +     +  GE L  ++ R+              L ++     D  +W  N      D
Sbjct: 2   NILYSGETLSPGEFL--NNGRYVFIMQEDCN-----LVLYDV---DKPIWATNTGGL--D 49

Query: 87  HNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYL 146
               L++ ++G LV+ +  N  IW++N   E  N V  L+ D N+VI   +         
Sbjct: 50  RRCHLSMQSDGNLVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVVIYGTA--------R 101

Query: 147 WQS 149
           W +
Sbjct: 102 WAT 104

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 61.3 bits (149), Expect = 3e-10
 Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 40/179 (22%)

Query: 509 NFSMECKLGEGGFGPVYKG-RLLNGEEVA---VKRLSSQSGQGLEEFKNEMLL-----IA 559
            + +  K+G GGFG +Y        E+ A   VK    ++G    E K    +     I 
Sbjct: 38  QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIK 97

Query: 560 KLQHRNLVRILG----------CCIEQGEKILILEYMPNKSLDVFLFDPTKK------RL 603
           K   R  +  LG              +  + +++E +    L   +              
Sbjct: 98  KWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQ-KISGQNGTFKKSTVLQ 155

Query: 604 LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI--SDFGLARMF 660
           LG +  + ++E       Y+H       +H D+KA+N+LL      ++  +D+GL+  +
Sbjct: 156 LGIRM-LDVLE-------YIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSYRY 203

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 56.8 bits (137), Expect = 4e-10
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 10/78 (12%)

Query: 72  DTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNL 131
           +  +W  N       +     +  +G LV++   N T+W +  + +A + V  L+ D N+
Sbjct: 48  NNPIWATNTGGL--GNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNV 105

Query: 132 VIRDNSSVNTTENYLWQS 149
           VI  ++        LW +
Sbjct: 106 VIYGDA--------LWAT 115

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 50.7 bits (121), Expect = 5e-08
 Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 6/88 (6%)

Query: 62  YLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNP 121
           +        P  +    + +     H     +  +  LVL +  N  IW+TN        
Sbjct: 5   FSKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGC 63

Query: 122 VAQLRDDGNLVIRDNSSVNTTENYLWQS 149
            A L+ DG LV+  N +       +WQS
Sbjct: 64  RAVLQPDGVLVVITNEN-----VTVWQS 86

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 61.3 bits (149), Expect = 5e-10
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 11/167 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEF---KNEMLLIAKLQH 563
             F     LG+G FG V   +        A+K L  +     +E      E  ++   +H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207

Query: 564 RNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
             L   L    +  +++  ++EY      ++F     ++     +AR    E I   L Y
Sbjct: 208 PFLTA-LKYSFQTHDRLCFVMEYANGG--ELFFHLSRERVFSEDRARFYGAE-IVSALDY 263

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           LH  S   +++RDLK  N++LD+D + KI+DFGL +    D     T
Sbjct: 264 LH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 308

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 60.4 bits (147), Expect = 7e-10
 Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 12/163 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKN---EMLLIAKLQH 563
           ++F +   +G+G FG V   +     +  A+K ++ Q      E +N   E+ ++  L+H
Sbjct: 15  DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74

Query: 564 RNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
             LV  L    +  E + ++++ +     D+               ++ I E +   L Y
Sbjct: 75  PFLVN-LWYSFQDEEDMFMVVDLLLGG--DLRYHLQQNVHFKEETVKLFICE-LVMALDY 130

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
           L      RIIHRD+K  N+LLD   +  I+DF +A M   +  
Sbjct: 131 LQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 59.9 bits (146), Expect = 7e-10
 Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 15/172 (8%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEF---KNEMLLIAKLQH 563
           ++F +   LG G FG V+  R   NG   A+K L  +    L++     +E L+++ + H
Sbjct: 6   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 65

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
             ++R+ G   +  +  +I++Y+    L  F      +R     A+    E +   L YL
Sbjct: 66  PFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAE-VCLALEYL 122

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H      II+RDLK  N+LLD++ + KI+DFG A+      +   T  + GT
Sbjct: 123 HSKD---IIYRDLKPENILLDKNGHIKITDFGFAK-----YVPDVTYTLCGT 166

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 60.0 bits (145), Expect = 2e-09
 Identities = 62/395 (15%), Positives = 116/395 (29%), Gaps = 32/395 (8%)

Query: 287 DYCGKYGYCGAN-----TICGPDQKPMCQCLEGFRLKSQFNQTGPIKCERSHSSECIKGD 341
           D+CG   Y   +       C  +    C       + S        +  R +    I  +
Sbjct: 117 DHCGSLLYGLIHQGMKCDTCMMNVHKRCVMN----VPSLCGTDHTERRGRIYIQAHIDRE 172

Query: 342 QFIKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFGELLD 401
             I +               S    +           K    +  +  +           
Sbjct: 173 VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQL 232

Query: 402 ASRPIRNFTGQSVYLRQPASGPGNKKLLWIIVIVVPPMVLLPSVYIFCRQRRKCKEKENM 461
                       ++     S       +  +   +  +        F    ++  E  N+
Sbjct: 233 KESDKDRRLSVEIWDWDLTS---RNDFMGSLSFGISELQKAGVDGWFKLLSQEEGEYFNV 289

Query: 462 ETSQDLLAFDITTRPNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSMEC-----KL 516
               +    +   R        G      ++      S        +   +        L
Sbjct: 290 PVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVL 349

Query: 517 GEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKNEM----LLIAKLQHRNLVRILG 571
           G+G FG V        +E+ AVK L        ++ +  M    +L    +   L + L 
Sbjct: 350 GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ-LH 408

Query: 572 CCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFR 630
            C +  +++  ++EY+     D+        R     A     E IA GL +L       
Sbjct: 409 SCFQTMDRLYFVMEYVNGG--DLMYHIQQVGRFKEPHAVFYAAE-IAIGLFFLQ---SKG 462

Query: 631 IIHRDLKASNVLLDRDMNPKISDFGLAR--MFGGD 663
           II+RDLK  NV+LD + + KI+DFG+ +  ++ G 
Sbjct: 463 IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 497

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 54.1 bits (130), Expect = 3e-09
 Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 23/126 (18%)

Query: 24  LAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRP 83
           L  + +     +     L   +  F+L           Y G W     +           
Sbjct: 1   LGTNYLLSGQTLDTEGHL--KNGDFDLVMQDDCNL-VLYNGNWQSNTAN----------- 46

Query: 84  ISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTE 143
            +  +  LT+++ G+LV+ N    T+W + A S   N  A +  DG LV+   S      
Sbjct: 47  -NGRDCKLTLTDYGELVIKNGDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFGPS------ 99

Query: 144 NYLWQS 149
             +++ 
Sbjct: 100 --VFKI 103

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 53.3 bits (128), Expect = 6e-09
 Identities = 21/112 (18%), Positives = 45/112 (40%), Gaps = 13/112 (11%)

Query: 22  VSLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRD 81
           +    + +     +    +L +  +  +L            L ++         W +N  
Sbjct: 2   IPFTNNLLFSGQVLYGDGRLTA--KNHQLVMQGDCN-----LVLY----GGKYGWQSNTH 50

Query: 82  RPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVI 133
              +  +  L +++ G+L++ +    TIWS+ +SS+    V  L+DDG  VI
Sbjct: 51  G--NGEHCFLRLNHKGELIIKDDDFKTIWSSRSSSKQGEYVLILQDDGFGVI 100

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 46.4 bits (110), Expect = 2e-06
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 79  NRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSS 138
             D  ++  N  L +  +  LVL        W +N     ++   +L   G L+I+D+  
Sbjct: 16  YGDGRLTAKNHQLVMQGDCNLVLYGGK--YGWQSNTHGNGEHCFLRLNHKGELIIKDDDF 73

Query: 139 VNTTENYLWQS 149
                  +W S
Sbjct: 74  -----KTIWSS 79

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 57.2 bits (139), Expect = 7e-09
 Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 15/164 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKNEM----LLIAKLQ 562
           E+F +   LG+G FG V+        +  A+K L        ++ +  M    +L    +
Sbjct: 17  EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76

Query: 563 HRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           H  L   + C  +  E +  ++EY+     D+     +  +    +A     E I  GL 
Sbjct: 77  HPFLTH-MFCTFQTKENLFFVMEYLNGG--DLMYHIQSCHKFDLSRATFYAAE-IILGLQ 132

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR--MFGGD 663
           +LH      I++RDLK  N+LLD+D + KI+DFG+ +  M G  
Sbjct: 133 FLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 173

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 56.9 bits (138), Expect = 8e-09
 Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 15/164 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKNEM----LLIAKLQ 562
           ++F +   +G G +  V   RL   + + A+K +  +     E+         +      
Sbjct: 9   QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68

Query: 563 HRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           H  LV  L  C +   ++  ++EY+     D+      +++L    AR    E I+  L 
Sbjct: 69  HPFLVG-LHSCFQTESRLFFVIEYVNGG--DLMFHMQRQRKLPEEHARFYSAE-ISLALN 124

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR--MFGGD 663
           YLH      II+RDLK  NVLLD + + K++D+G+ +  +  GD
Sbjct: 125 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 56.9 bits (138), Expect = 9e-09
 Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 15/164 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKNEM----LLIAKLQ 562
            +F     +G+G FG V   R    E   AVK L  ++    +E K+ M    +L+  ++
Sbjct: 38  SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97

Query: 563 HRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           H  LV  L    +  +K+  +L+Y+     ++F     ++  L  +AR    E IA  L 
Sbjct: 98  HPFLVG-LHFSFQTADKLYFVLDYINGG--ELFYHLQRERCFLEPRARFYAAE-IASALG 153

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR--MFGGD 663
           YLH      I++RDLK  N+LLD   +  ++DFGL +  +    
Sbjct: 154 YLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 56.5 bits (137), Expect = 1e-08
 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 14/163 (8%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEF---KNEMLLIAKLQH 563
            +F     LG+G FG V   R        A+K L  +     +E      E  ++   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 564 RNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
             L   L    +  +++  ++EY      ++F     ++     +AR    E I   L Y
Sbjct: 65  PFLTA-LKYAFQTHDRLCFVMEYANGG--ELFFHLSRERVFTEERARFYGAE-IVSALEY 120

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR--MFGGD 663
           LH      +++RD+K  N++LD+D + KI+DFGL +  +  G 
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 56.0 bits (136), Expect = 1e-08
 Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 18/167 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLS----SQSGQGLEEFKNEMLLIA 559
           E F +   LG+GG+G V++ R +     G+  A+K L      ++ +     K E  ++ 
Sbjct: 17  ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76

Query: 560 KLQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           +++H  +V  L    + G K+ LILEY+    L  F+    +   +   A   + E I+ 
Sbjct: 77  EVKHPFIVD-LIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAE-ISM 132

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR--MFGGD 663
            L +LH   +  II+RDLK  N++L+   + K++DFGL +  +  G 
Sbjct: 133 ALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT 176

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 55.6 bits (135), Expect = 2e-08
 Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 16/165 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV----AVKRLSSQS--GQGLEEFKNEMLLIAKL 561
             F +   LG+G FG V+  + ++G +     A+K L   +   +     K E  ++ ++
Sbjct: 24  SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83

Query: 562 QHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
            H  +V+ L    +   K+ LIL+++    L  F     +        +  + E +A  L
Sbjct: 84  NHPFIVK-LHYAFQTEGKLYLILDFLRGGDL--FTRLSKEVMFTEEDVKFYLAE-LALAL 139

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR--MFGGD 663
            +LH      II+RDLK  N+LLD + + K++DFGL++  +    
Sbjct: 140 DHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 56.2 bits (136), Expect = 2e-08
 Identities = 42/201 (20%), Positives = 80/201 (39%), Gaps = 20/201 (9%)

Query: 476 PNEFSEANGDRRDKSKDSWLPLFSLASVAAATENFSME----CK-LGEGGFGPVYKGRLL 530
           P   +           +      +      A+ +  ++     + +G G +  V   RL 
Sbjct: 15  PTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLK 74

Query: 531 NGEEV-AVKRLSSQSGQGLEEFKNEM----LLIAKLQHRNLVRILGCCIEQGEKI-LILE 584
             + + A++ +  +     E+         +      H  LV  L  C +   ++  ++E
Sbjct: 75  KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG-LHSCFQTESRLFFVIE 133

Query: 585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD 644
           Y+     D+      +++L    AR    E I+  L YLH      II+RDLK  NVLLD
Sbjct: 134 YVNGG--DLMFHMQRQRKLPEEHARFYSAE-ISLALNYLH---ERGIIYRDLKLDNVLLD 187

Query: 645 RDMNPKISDFGLAR--MFGGD 663
            + + K++D+G+ +  +  GD
Sbjct: 188 SEGHIKLTDYGMCKEGLRPGD 208

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113

 Score = 51.8 bits (124), Expect = 2e-08
 Identities = 15/125 (12%), Positives = 47/125 (37%), Gaps = 18/125 (14%)

Query: 25  AADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPI 84
             + +  +  + D  +L  +++ + L            L +      + +VW +      
Sbjct: 5   VRNVLFSSQVMYDNAQL--ATRDYSLVMRDDCN-----LVLTKGSKTN-IVWESGTSG-- 54

Query: 85  SDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTEN 144
              +  + + ++G+L + +    T++ +N   +  + V  L+ +G  V+   +       
Sbjct: 55  RGQHCFMRLGHSGELDITDDRLNTVFVSNTVGQEGDYVLILQINGQAVVYGPA------- 107

Query: 145 YLWQS 149
            +W +
Sbjct: 108 -VWST 111

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 55.7 bits (135), Expect = 2e-08
 Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 29/171 (16%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKNEM----LLIAKLQ 562
            +F+    LG+G FG V        +E+ AVK L        ++ +  M    +L    +
Sbjct: 20  TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79

Query: 563 HRNLVRILGCCIEQGEKI-LILEYMPNKSL-------DVFLFDPTKKRLLGWQARIGIIE 614
              L + L  C +  +++  ++EY+    L         F             A     E
Sbjct: 80  PPFLTQ-LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP---------HAVFYAAE 129

Query: 615 GIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR--MFGGD 663
            IA GL +L       II+RDLK  NV+LD + + KI+DFG+ +  ++ G 
Sbjct: 130 -IAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 54.9 bits (133), Expect = 3e-08
 Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 15/156 (9%)

Query: 516 LGEGGFGPVYKGRLLNGEEV-AVKRLSSQSGQGLEEFKNEM----LLIAKLQHRNLVRIL 570
           LG+G FG V   R+    ++ AVK L        ++ +  M    +L     H  L + L
Sbjct: 31  LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ-L 89

Query: 571 GCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
            CC +  +++  ++E++     D+       +R    +AR    E I   L++LH     
Sbjct: 90  FCCFQTPDRLFFVMEFVNGG--DLMFHIQKSRRFDEARARFYAAE-IISALMFLH---DK 143

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLA--RMFGGD 663
            II+RDLK  NVLLD + + K++DFG+    +  G 
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV 179

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 51.1 bits (121), Expect = 3e-07
 Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 10/79 (12%)

Query: 71  PDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGN 130
            D  VW  N             +  NG++ +L   N  +W++  S  A   V  L+ D N
Sbjct: 167 RDDRVWSTNTAGK--GTGCRAVLQPNGRMDVLTNQNIAVWTSGNSRSAGRYVFVLQPDRN 224

Query: 131 LVIRDNSSVNTTENYLWQS 149
           L I   +        LW +
Sbjct: 225 LAIYGGA--------LWTT 235

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 44.1 bits (103), Expect = 6e-05
 Identities = 15/90 (16%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 66  WFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQL 125
           +  +  D      +  + +      L++  +  LVL +  +  +WSTN + +     A L
Sbjct: 129 YSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFD-RDDRVWSTNTAGKGTGCRAVL 187

Query: 126 RDDGNLVIRDNSSVNTTENYLWQSFDYPTD 155
           + +G + +  N +       +W S +  + 
Sbjct: 188 QPNGRMDVLTNQN-----IAVWTSGNSRSA 212

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 51.9 bits (125), Expect = 3e-07
 Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 18/178 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEV----AVKRLS----SQSGQGLEEFKNE-MLLI 558
           ENF +   LG G +G V+  R ++G +     A+K L      Q  +  E  + E  +L 
Sbjct: 54  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113

Query: 559 AKLQHRNLVRILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIA 617
              Q   LV  L    +   K+ LIL+Y+    L  F     ++R    + +I + E I 
Sbjct: 114 HIRQSPFLVT-LHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVGE-IV 169

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             L +LH   +  II+RD+K  N+LLD + +  ++DFGL++ F  DE +       GT
Sbjct: 170 LALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETER-AYDFCGT 223

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 50.5 bits (121), Expect = 9e-07
 Identities = 44/184 (23%), Positives = 68/184 (36%), Gaps = 50/184 (27%)

Query: 515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRIL 570
           KLG G F  V+  + ++N   VA+K +           +E       I  LQ  N     
Sbjct: 26  KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDE-------IKLLQRVNDADNT 78

Query: 571 GCCIEQGEKILILEYMPNKSLDVF------------LFDPTKKRLLGWQAR-------IG 611
                    IL L       LD F            +F+   + LL    +       + 
Sbjct: 79  KEDSMGANHILKL-------LDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 131

Query: 612 IIEGIAQ----GLLYLHHYSRFRIIHRDLKASNVLLDRDMNP------KISDFGLARMFG 661
            ++ I++    GL Y+H   R  IIH D+K  NVL++   +P      KI+D G A  + 
Sbjct: 132 YVKQISKQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA-CWY 188

Query: 662 GDEL 665
            +  
Sbjct: 189 DEHY 192

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 47.4 bits (111), Expect = 6e-06
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 8/66 (12%)

Query: 88  NAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLW 147
                   +G LV+    N  +W ++    A + V +L+ +G++ I D   V       W
Sbjct: 196 AVRAVFQGDGNLVVYGAGNAVLWHSHTGGHA-SAVLRLQANGSIAILDEKPV-------W 247

Query: 148 QSFDYP 153
             F + 
Sbjct: 248 ARFGFQ 253

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 46.2 bits (108), Expect = 1e-05
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 22/165 (13%)

Query: 23  SLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDR 82
            +    +     +  G+ L+S +QRF+L     G      L I         VWVAN  +
Sbjct: 11  GVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDGN-----LVIQD---NGATVWVANEQQ 62

Query: 83  PIS------DHNAVLTISNNGKLVLLNQTNGTIW-----STNASSEAKNPVAQLRDDGNL 131
           P S      +  A L         L + +   +W     +  ++ +       L+DDGN+
Sbjct: 63  PFSSTIPLRNKKAPLAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNI 122

Query: 132 VIRDNSSVNTTENYLWQSFDYPTDTLL---QDMKMGWDLKNRRER 173
           V+ D+ ++      +          LL    ++  G        +
Sbjct: 123 VLVDSLALWNGTPAIPLVPGAIDSLLLAPGSELVQGVVYGAGASK 167

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111

 Score = 44.4 bits (105), Expect = 7e-06
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 88  NAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSS 138
           +A   +  +  LVL N      + +N      +   +L + G L I   +S
Sbjct: 21  SAAFVMQGDCNLVLYN--EAGGFQSNTHGRGVDCTLRLNNRGQLEIHSANS 69

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 111

 Score = 41.7 bits (98), Expect = 7e-05
 Identities = 12/81 (14%), Positives = 32/81 (39%), Gaps = 13/81 (16%)

Query: 72  DTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGT---IWSTNASSEAKNPVAQLRDD 128
           +   + +N        +  L ++N G+L + +  + T   ++  + ++   N  A L  D
Sbjct: 37  EAGGFQSNTHG--RGVDCTLRLNNRGQLEIHSANSNTPVWVYPRSVNTVRGNYAATLGPD 94

Query: 129 GNLVIRDNSSVNTTENYLWQS 149
            ++ I   +        +W +
Sbjct: 95  QHVTIYGPA--------IWST 107

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 47.8 bits (114), Expect = 7e-06
 Identities = 38/171 (22%), Positives = 62/171 (36%), Gaps = 41/171 (23%)

Query: 510 FSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHR- 564
           + ++  +G+G FG V K    +  E VA+K + ++     Q   E +    L+  +    
Sbjct: 56  YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVR----LLELMNKHD 111

Query: 565 -----NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKK-----------RLLGWQA 608
                 +V +    + +    L+ E      L   L+D  +            R    Q 
Sbjct: 112 TEMKYYIVHLKRHFMFRNHLCLVFE-----MLSYNLYDLLRNTNFRGVSLNLTRKFAQQ- 165

Query: 609 RIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP--KISDFGLA 657
                  +   LL+L       IIH DLK  N+LL        KI DFG +
Sbjct: 166 -------MCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 47.8 bits (114), Expect = 8e-06
 Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 25/156 (16%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHR------N 565
           +G+G FG V K       + VA+K + ++     Q  EE +    ++  L+ +      N
Sbjct: 105 IGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIR----ILEHLRKQDKDNTMN 160

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKK-RLLGWQARIGIIEGIAQGLLY-L 623
           ++ +L     +    +  E      L + L++  KK +  G+   + ++   A  +L  L
Sbjct: 161 VIHMLENFTFRNHICMTFE-----LLSMNLYELIKKNKFQGFS--LPLVRKFAHSILQCL 213

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNP--KISDFGLA 657
               + RIIH DLK  N+LL +      K+ DFG +
Sbjct: 214 DALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 9e-06
 Identities = 88/561 (15%), Positives = 152/561 (27%), Gaps = 173/561 (30%)

Query: 157 LLQDMKMGWDLKNRRE---RYLSSWRSDD---DPSPGKFTNRLDIHVLPKMCTFNGSVKY 210
                   +D K+ ++     LS    D           T RL   +L K          
Sbjct: 25  FEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK---------- 74

Query: 211 TCTGEWTGDGFVSALSNTN--FLYKQFLVENQDE--ISYWYEPYNRPSIMTLKLSPSGFV 266
               E     FV  +   N  FL      E +    ++  Y           ++     V
Sbjct: 75  ---QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131

Query: 267 TR-QLWNEDSNEWDELFSIPDDYCGKYGYCGANTICGPDQKPMCQCLEGFRLKSQFNQTG 325
           +R Q + +      EL   P       G  G     G   K     +             
Sbjct: 132 SRLQPYLKLRQALLEL--RPAKNVLIDGVLG----SG---K---TWVALDVC-------- 171

Query: 326 PIKCERSHSSECIKGDQ-F-IKLDNIKAPDFIEVSLNQSMNLQQCAAECLKNCTCKAYAN 383
                 S+  +C    + F + L N  +P+ +   L     LQ+   +   N T ++  +
Sbjct: 172 -----LSYKVQCKMDFKIFWLNLKNCNSPETV---LEM---LQKLLYQIDPNWTSRSDHS 220

Query: 384 SNVTEGSGCLMWFGELLDASRPIRNFTGQSVYLRQPASGPGNKKLLWIIVIVVPPMVLLP 443
           SN+            +      +R       Y            LL          VL  
Sbjct: 221 SNIKL---------RIHSIQAELRRLLKSKPY---------ENCLL----------VL-- 250

Query: 444 SVYIFCRQRRKCKEKENMETSQDLLAFD------ITTRPNEFSEANGDRRDKSKDSWLPL 497
                           N++ ++   AF+      +TT            R K    +L  
Sbjct: 251 ---------------LNVQNAKAWNAFNLSCKILLTT------------RFKQVTDFL-- 281

Query: 498 FSLASVAAATENFSMECKLGEGGFGPVY-KGRLLNGEEVAVKRLSSQSGQGL-------- 548
                 AA T + S++         P   K  LL   +   + L  +             
Sbjct: 282 -----SAATTTHISLD--HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334

Query: 549 EEFKNEMLLIAKLQHRN---LVRILGCCIEQGEKILILEYMPNKSLDVFLFD---PTKKR 602
           E  ++ +      +H N   L  I+   +   E     +      L VF      PT   
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF--DRLSVFPPSAHIPTI-- 390

Query: 603 LLG--WQARIGI-IEGIAQGL--------------LYLHHYSRFRIIHRDLKASNVLLDR 645
           LL   W   I   +  +   L              + +        I+ +LK   +  + 
Sbjct: 391 LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS------IYLELKV-KLENEY 443

Query: 646 DMNPKISD-FGLARMFGGDEL 665
            ++  I D + + + F  D+L
Sbjct: 444 ALHRSIVDHYNIPKTFDSDDL 464

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	675
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.98
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.98
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.98
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.98
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.98
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.98
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.97
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.96
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.96
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.96
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.96
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.94
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.94
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.94
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.94
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.94
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.94
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.94
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.94
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.94
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.94
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.94
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.94
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.94
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.94
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.94
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.94
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.94
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.93
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.93
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.93
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.93
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.93
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.93
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.93
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.93
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.93
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.93
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.93
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.93
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.93
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.93
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.93
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.93
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.93
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.93
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.93
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.93
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.93
3niz_A	311	Rhodanese family protein; structural genomics, str	99.93
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.93
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.93
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.93
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.93
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.93
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.93
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.93
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.93
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.93
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.93
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.92
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.92
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.92
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.92
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.92
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.92
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.92
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.92
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.92
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.92
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.92
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.92
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.92
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.92
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.92
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.92
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.92
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.92
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.92
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.92
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.92
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.92
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.92
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.92
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.92
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.92
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.92
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.92
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.92
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.92
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.92
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.92
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.92
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.92
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.92
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.92
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.92
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.92
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.92
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.92
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.92
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.92
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.92
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.92
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.92
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.92
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.92
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.92
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.92
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.92
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.92
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.92
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.91
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.91
3bhy_A	283	Death-associated protein kinase 3; death associate	99.91
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.91
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.91
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.91
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.91
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.91
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.91
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.91
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.91
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.91
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.91
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.91
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.91
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.91
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.91
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.91
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.91
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.91
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.91
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.91
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.91
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.91
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.91
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.91
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.91
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.91
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.91
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.91
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.91
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.91
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.91
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.91
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.91
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.91
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.91
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.91
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.91
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.91
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.91
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.91
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.91
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.91
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.91
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.91
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.91
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.91
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.91
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.91
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.91
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.91
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.9
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.9
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.9
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.9
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.9
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.9
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.9
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.9
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.9
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.9
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.9
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.9
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.9
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.9
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.9
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.9
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.9
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.9
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.9
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.9
3uqc_A	286	Probable conserved transmembrane protein; structur	99.9
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.9
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.9
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.9
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.9
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.9
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.9
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.9
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.9
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.9
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.9
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.9
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.9
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.9
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.9
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.9
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.9
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.9
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.9
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.89
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.89
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.89
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.89
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.89
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.89
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.89
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.89
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.89
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.89
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.89
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.89
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.89
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.89
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.89
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.89
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.89
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.89
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.89
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.88
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.88
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.88
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.88
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.88
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.88
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.88
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.88
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.88
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.88
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.87
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.87
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.87
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.87
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.87
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.87
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.86
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.86
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.86
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.86
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.85
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.85
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.83
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.82
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.81
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.8
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.77
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.71
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.69
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.69
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.67
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.66
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.64
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.62
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.61
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.5
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.38
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.38
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.32
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.28
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.22
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.21
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.18
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.14
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.06
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	98.95
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	98.9
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.64
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.55
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.53
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.49
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.36
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.35
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.3
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.06
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.0
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.83
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.76
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.67
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.33
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.25
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.23
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.2
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.15
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.14
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.08
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.85
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.4
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.09
3mes_A	424	Choline kinase; malaria, structural genomics, stru	95.03
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	91.51
2ll3_A	82	Micronemal protein 4; cell adhesion; NMR {Toxoplas	88.03
1b9w_A	95	Protein (merozoite surface protein 1); MSP-1, cand	82.42
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	81.54

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=100.00  E-value=1.6e-44  Score=368.88  Aligned_cols=232  Identities=19%  Similarity=0.214  Sum_probs=181.9

Q ss_pred             ccccccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCC-CcEEEEecCCCCCCCC----cceEEEeeCC
Q 005825           23 SLAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVP-DTVVWVANRDRPISDH----NAVLTISNNG   97 (675)
Q Consensus        23 ~~~~~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~-~tvVW~Anr~~pv~~~----~~~l~l~~~G   97 (675)
                      +++.|+|++|++|++|++|+|++|.|+||||+++   ++||   |+  + + |||+|||++|+.++    +++|+|+.||
T Consensus        11 ~~~~~~l~~g~~l~~~~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~~~G   81 (276)
T 3m7h_A           11 GVGTSVLPAYQTLSAGQYLLSPNQRFKLLLQGDG---NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLAFYV   81 (276)
T ss_dssp             CTTSSEECTTEEBCTTCEEECTTSSEEEEECTTS---CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSEEEE
T ss_pred             cccCCEecCCCEecCCCEEEcCCCcEEEEEECCC---CeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEeCCC
Confidence            4567999999999999999999999999999543   5677   77  6 7 99999999999875    7899999999


Q ss_pred             eEEE--EeCCCCeEEEeccCCC-----CCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccccccccccCC
Q 005825           98 KLVL--LNQTNGTIWSTNASSE-----AKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKNR  170 (675)
Q Consensus        98 ~Lvl--~~~~g~~vWss~~~~~-----~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~~tg  170 (675)
                      +|||  .|++|++||+++++..     ..+.+|+|+|+|||||+|       +.+||||  ||||||||||++|.++.+|
T Consensus        82 ~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~-------~~~lWqS--~ptdtlLpg~~~~~~l~~g  152 (276)
T 3m7h_A           82 QYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD-------SLALWNG--TPAIPLVPGAIDSLLLAPG  152 (276)
T ss_dssp             SSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE-------EEEEEES--CTTSCCCCSCTTCEEECSS
T ss_pred             cEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC-------CceeeCc--ccccccccccccccccccC
Confidence            9999  7888999999998642     235789999999999997       3589999  9999999999999999888


Q ss_pred             CceeEEEecCCCCCCCceeeeeecCCCCceEEEEc-CCeeeeeeCccCCCceeeeeecCceeeEEEEeeecCeeEEEEee
Q 005825          171 RERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFN-GSVKYTCTGEWTGDGFVSALSNTNFLYKQFLVENQDEISYWYEP  249 (675)
Q Consensus       171 ~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~-~~~~y~~~g~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (675)
                      ..  |   ++.+||++|.|+++||++|.  +++++ +...||++|+|++.. ....+.....+  .+.++.+ ..+.++.
T Consensus       153 ~~--L---~S~~dps~G~fsl~l~~dGn--lvLy~~~~~~yW~Sgt~~~~~-~~l~l~~dGnL--vl~d~~~-~~vWsS~  221 (276)
T 3m7h_A          153 SE--L---VQGVVYGAGASKLVFQGDGN--LVAYGPNGAATWNAGTQGKGA-VRAVFQGDGNL--VVYGAGN-AVLWHSH  221 (276)
T ss_dssp             EE--E---CTTCEEEETTEEEEECTTSC--EEEECTTSSEEEECCCTTTTC-CEEEECTTSCE--EEECTTS-CEEEECS
T ss_pred             cc--c---ccCCCCCCceEEEeecCCce--EEEEeCCCeEEEECCCCCCcc-EEEEEcCCCeE--EEEeCCC-cEEEEec
Confidence            44  6   67899999999999999996  44455 458999999998654 22233322211  1223322 2233333


Q ss_pred             cCCCceEEEEECcCccEEEEEecCCCCceEEeeeccC
Q 005825          250 YNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPD  286 (675)
Q Consensus       250 ~~~~~~~r~~l~~~G~l~~~~~~~~~~~W~~~~~~p~  286 (675)
                      ......+|++|+.||++++|.|   ...|..++.+|.
T Consensus       222 t~~~~~~rl~Ld~dGnLvly~~---~~~Wqsf~~~P~  255 (276)
T 3m7h_A          222 TGGHASAVLRLQANGSIAILDE---KPVWARFGFQPT  255 (276)
T ss_dssp             CTTCTTCEEEECTTSCEEEEEE---EEEEESSSCCTT
T ss_pred             CCCCCCEEEEEcCCccEEEEcC---CCeEEccCccCC
Confidence            3333458999999999999998   345666666554

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=100.00  E-value=3e-37  Score=309.94  Aligned_cols=216  Identities=15%  Similarity=0.171  Sum_probs=164.4

Q ss_pred             cccccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEe
Q 005825           24 LAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLN  103 (675)
Q Consensus        24 ~~~~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~  103 (675)
                      ++.|+|++|++|.+|++|  ++|.|+|||+.+++     +. +|..  +|+||+|||+.|   .+++|+|+.||+|||+|
T Consensus         6 ~~~~~i~~g~~L~~g~~l--~~g~f~l~f~~~gn-----l~-ly~~--~~~vW~an~~~~---~~~~l~l~~dGnLvl~d   72 (236)
T 1dlp_A            6 GLSHEGSHPQTLHAAQSL--ELSSFRFTMQSDCN-----LV-LFDS--DVRVWASNTAGA---TGCRAVLQSDGLLVILT   72 (236)
T ss_dssp             CSSSSSCSCSCCCTTCEE--CSTTEEEEECTTSC-----EE-EEES--SSEEECCCCCSC---SCCBCCBCSSSCBCCBC
T ss_pred             eccceeCCCCEECCCCEE--EcCCEEEEECCCCc-----EE-EEEC--CEEEEECCCCCC---CCeEEEEcCCCcEEEEc
Confidence            567999999999999999  59999999997765     23 3433  799999999988   46899999999999999


Q ss_pred             CCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhh-hccccccccc-cCCC-----ceeEE
Q 005825          104 QTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTL-LQDMKMGWDL-KNRR-----ERYLS  176 (675)
Q Consensus       104 ~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTl-Lpg~~l~~~~-~tg~-----~~~l~  176 (675)
                      ++|.+||+|++.......+|+|+|+|||||++      .  ++||||||||||+ ||+|  +.+. .+|.     ++.|+
T Consensus        73 ~~~~~vW~s~~~~~~~~~~~~l~d~Gnlvl~~------~--~~W~S~~~p~~t~~lp~~--g~d~L~~gq~~~~~~~~L~  142 (236)
T 1dlp_A           73 AQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYG------P--GLWDSGTSNKGSVVVANN--GNSILYSTQGNDNHPQTLH  142 (236)
T ss_dssp             TTTCCSCCCCCCCCSSCCEEEECSSSCEEEEC------S--EEEECSCCCSSCCCCSSC--CCEECCCC--CCCCCCEEC
T ss_pred             CCCcEEEeCCccccCCcEEEEEeCCCCEEEec------C--CEEECCCCCCcccccCCc--cceEEecCCcCCCccceEE
Confidence            99999999998654445689999999999985      2  7999999999777 5554  4443 4443     46776


Q ss_pred             EecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCccCCCceeee-eecCceeeEEEEeeecCeeEEEEeecCCCce
Q 005825          177 SWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSA-LSNTNFLYKQFLVENQDEISYWYEPYNRPSI  255 (675)
Q Consensus       177 S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~w~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (675)
                         +.+||++|.|+|+++++|  +++++++..+||++++|++. +... .+.....+ ..+..++.+++.++...+ ...
T Consensus       143 ---s~~d~s~G~~~l~l~~dG--~LvL~~~~~~~W~s~~~~~~-~~~~~~L~~~Gnl-~ly~~~~~~vw~s~~~~~-~~~  214 (236)
T 1dlp_A          143 ---ATQSLQLSPYRLSMETDC--NLVLFDRDDRVWSTNTAGKG-TGCRAVLQPNGRM-DVLTNQNIAVWTSGNSRS-AGR  214 (236)
T ss_dssp             ---SSCCCBCSSCEEEEETTT--EEEEEBTTBCCSCCCCCSSC-SSCEEEEETTTEE-EEEETTTEEEEECCCCCS-SSC
T ss_pred             ---cCcEeecCcEEEEECCCC--cEEEEcCCEeEEeCCCcCCC-CceEEEECCCCcE-EEEeCCCcEEEEeCCCCC-CCC
Confidence               578999999999999999  57778888899999999654 4333 44333211 112223334444443333 346


Q ss_pred             EEEEECcCccEEEEE
Q 005825          256 MTLKLSPSGFVTRQL  270 (675)
Q Consensus       256 ~r~~l~~~G~l~~~~  270 (675)
                      +|++||+||++++|.
T Consensus       215 ~rl~Ld~dG~l~ly~  229 (236)
T 1dlp_A          215 YVFVLQPDRNLAIYG  229 (236)
T ss_dssp             CEEEECSSSCEEEEC
T ss_pred             EEEEEcCCCcEEEeC
Confidence            899999999999994

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3.9e-35  Score=304.78  Aligned_cols=166  Identities=30%  Similarity=0.494  Sum_probs=142.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .++|.+.++||+|+||+||+|++.      +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~   91 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   91 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            357889999999999999999864      47789999998766666788999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCC----------CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeE
Q 005825          581 LILEYMPNKSLDVFLFDP----------TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPK  650 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~k  650 (675)
                      ||||||++|+|.++|+..          .....++|.+++.|+.|||+||+|||+++   ||||||||+||||++++.+|
T Consensus        92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~K  168 (299)
T 4asz_A           92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK  168 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEE
Confidence            999999999999999642          22356999999999999999999999987   99999999999999999999


Q ss_pred             EeeeccceecCCCcccCCCCceecC
Q 005825          651 ISDFGLARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       651 l~DFGla~~~~~~~~~~~~~~~~GT  675 (675)
                      |+|||+|+.+...+....+...+||
T Consensus       169 i~DFGla~~~~~~~~~~~~~~~~gt  193 (299)
T 4asz_A          169 IGDFGMSRDVYSTDYYRVGGHTMLP  193 (299)
T ss_dssp             ECCCSCHHHHTGGGCEEETTTEEEC
T ss_pred             ECCcccceecCCCCceeecCceecC
Confidence            9999999987655433333344554

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=8.1e-35  Score=306.54  Aligned_cols=166  Identities=30%  Similarity=0.504  Sum_probs=134.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .++|.+.++||+|+||+||+|++.      +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            357888899999999999999864      47889999998766666788999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCC------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC
Q 005825          581 LILEYMPNKSLDVFLFDPT------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN  648 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~  648 (675)
                      ||||||++|+|.++++...            ....++|.+++.|+.|||+||+|||+++   ||||||||+||||++++.
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~  196 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLV  196 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCc
Confidence            9999999999999996532            2346899999999999999999999987   999999999999999999


Q ss_pred             eEEeeeccceecCCCcccCCCCceecC
Q 005825          649 PKISDFGLARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       649 ~kl~DFGla~~~~~~~~~~~~~~~~GT  675 (675)
                      +||+|||+|+.+...+....+.+.+||
T Consensus       197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt  223 (329)
T 4aoj_A          197 VKIGDFGMSRDIYSTDYYRVGGRTMLP  223 (329)
T ss_dssp             EEECCCC----------------CCCC
T ss_pred             EEEcccccceeccCCCcceecCccccc
Confidence            999999999988655443334445565

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.2e-34  Score=300.45  Aligned_cols=165  Identities=33%  Similarity=0.474  Sum_probs=140.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .++++.++||+|+||+||+|++.      +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..+
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~  105 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS  105 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence            45677899999999999999863      46789999997543 345678999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC
Q 005825          581 LILEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM  647 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~  647 (675)
                      ||||||++|+|.++|....             ....++|.+++.|+.|||+||+|||+++   ||||||||+||||++++
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~  182 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKL  182 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGG
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCC
Confidence            9999999999999996432             1346899999999999999999999987   99999999999999999


Q ss_pred             CeEEeeeccceecCCCcccCCCCceecC
Q 005825          648 NPKISDFGLARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       648 ~~kl~DFGla~~~~~~~~~~~~~~~~GT  675 (675)
                      ++||+|||+|+.+...+....+...+||
T Consensus       183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt  210 (308)
T 4gt4_A          183 NVKISDLGLFREVYAADYYKLLGNSLLP  210 (308)
T ss_dssp             CEEECCSCCBCGGGGGGCBCSSSSSCBC
T ss_pred             CEEECCcccceeccCCCceeEecccccC
Confidence            9999999999988655444444455665

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.2e-34  Score=297.73  Aligned_cols=162  Identities=30%  Similarity=0.407  Sum_probs=145.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||+||+|+. .+++.||||++.+.   .....+.+.+|+++|++++|||||++++++.+.+..||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5799999999999999999986 46899999999753   2345678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++|+|.+++.   +.+.+++.+...++.||+.||+|||+++   |+||||||+||||++++++||+|||+|+.+..+
T Consensus       112 Ey~~gG~L~~~i~---~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~  185 (311)
T 4aw0_A          112 SYAKNGELLKYIR---KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  185 (311)
T ss_dssp             CCCTTEEHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             ecCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence            9999999999994   3457899999999999999999999998   999999999999999999999999999998766


Q ss_pred             cccCCCCceecC
Q 005825          664 ELQGNTKRIVGT  675 (675)
Q Consensus       664 ~~~~~~~~~~GT  675 (675)
                      .....+.+++||
T Consensus       186 ~~~~~~~~~~GT  197 (311)
T 4aw0_A          186 SKQARANSFVGT  197 (311)
T ss_dssp             TTCCCBCCCCSC
T ss_pred             CCcccccCcccC
Confidence            555556667887

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.1e-33  Score=298.09  Aligned_cols=159  Identities=27%  Similarity=0.411  Sum_probs=143.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      ..|++.++||+|+||+||+|+.. +|+.||||+++.......+.+.+|+.+|++++|||||++++++.+++..||||||+
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            56999999999999999999875 69999999998666666778999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCccc
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ  666 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~  666 (675)
                      ++|+|.+++..    ..+++.+...|+.||+.||+|||+++   ||||||||+||||++++++||+|||+|+.+..+...
T Consensus       154 ~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~  226 (346)
T 4fih_A          154 EGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR  226 (346)
T ss_dssp             TTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred             CCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCCc
Confidence            99999999842    35899999999999999999999998   999999999999999999999999999988654432


Q ss_pred             CCCCceecC
Q 005825          667 GNTKRIVGT  675 (675)
Q Consensus       667 ~~~~~~~GT  675 (675)
                        +++++||
T Consensus       227 --~~~~~GT  233 (346)
T 4fih_A          227 --RKSLVGT  233 (346)
T ss_dssp             --BCCCCSC
T ss_pred             --ccccccC
Confidence              3446787

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=8.9e-34  Score=294.85  Aligned_cols=161  Identities=29%  Similarity=0.482  Sum_probs=132.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .+++++.++||+|+||+||+|++.+  .||||+++..  ..+..++|.+|+.++++++|||||+++|++.+ +..+||||
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE  111 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ  111 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence            4678889999999999999998743  5999999753  33456789999999999999999999998864 56899999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ||++|+|.++|+..  ...++|.+++.|+.|||+||+|||+++   ||||||||+||||++++++||+|||+|+.+....
T Consensus       112 y~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~  186 (307)
T 3omv_A          112 WCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS  186 (307)
T ss_dssp             CCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred             cCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence            99999999999643  346999999999999999999999987   9999999999999999999999999999886544


Q ss_pred             ccCCCCceecC
Q 005825          665 LQGNTKRIVGT  675 (675)
Q Consensus       665 ~~~~~~~~~GT  675 (675)
                      ....+.+.+||
T Consensus       187 ~~~~~~~~~GT  197 (307)
T 3omv_A          187 GSQQVEQPTGS  197 (307)
T ss_dssp             -------CCCC
T ss_pred             cceeecccccC
Confidence            33344556776

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=5.3e-33  Score=299.97  Aligned_cols=160  Identities=27%  Similarity=0.408  Sum_probs=143.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .+.|++.++||+|+||+||+|+.. +|+.||||++........+.+.+|+.+|++++|||||++++++.+.+..||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            367999999999999999999874 5999999999876666677899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCcc
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL  665 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~  665 (675)
                      |++|+|.+++..    ..+++.+...|+.||+.||+|||+++   ||||||||+||||+.++++||+|||+|+.+..+..
T Consensus       230 ~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~  302 (423)
T 4fie_A          230 LEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP  302 (423)
T ss_dssp             CTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred             CCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence            999999999842    35899999999999999999999998   99999999999999999999999999998865543


Q ss_pred             cCCCCceecC
Q 005825          666 QGNTKRIVGT  675 (675)
Q Consensus       666 ~~~~~~~~GT  675 (675)
                      .  ...++||
T Consensus       303 ~--~~~~~GT  310 (423)
T 4fie_A          303 R--RKSLVGT  310 (423)
T ss_dssp             C--BCCCEEC
T ss_pred             c--ccccccC
Confidence            2  3446887

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.2e-33  Score=298.27  Aligned_cols=162  Identities=25%  Similarity=0.412  Sum_probs=135.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|++.++||+|+||+||+|+.. +|+.||||+++..  .....+.|.+|+.+|++++|||||++++++.+++..|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            68999999999999999999864 5999999999754  23345789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |++||+|.+++... +...+++.+...|+.||+.||+|||+++   ||||||||+||||++++.+||+|||+|+.+....
T Consensus       104 y~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  179 (350)
T 4b9d_A          104 YCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV  179 (350)
T ss_dssp             CCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred             CCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence            99999999999542 3345788999999999999999999998   9999999999999999999999999999875432


Q ss_pred             ccCCCCceecC
Q 005825          665 LQGNTKRIVGT  675 (675)
Q Consensus       665 ~~~~~~~~~GT  675 (675)
                      .  .++..+||
T Consensus       180 ~--~~~~~~GT  188 (350)
T 4b9d_A          180 E--LARACIGT  188 (350)
T ss_dssp             H--HHHHHHSC
T ss_pred             c--cccccCCC
Confidence            2  12335665

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.98  E-value=2.3e-32  Score=284.19  Aligned_cols=154  Identities=27%  Similarity=0.412  Sum_probs=127.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC--------
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG--------  577 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~--------  577 (675)
                      ++|++.+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|+.+|++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            46999999999999999999864 68999999997543 234567999999999999999999999997654        


Q ss_pred             ----eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEee
Q 005825          578 ----EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISD  653 (675)
Q Consensus       578 ----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~D  653 (675)
                          ..++||||+++|+|.+++.........++...+.|+.||+.||+|||+++   ||||||||+||||+.++.+||+|
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence                36899999999999999976544445677778899999999999999998   99999999999999999999999


Q ss_pred             eccceecCCCc
Q 005825          654 FGLARMFGGDE  664 (675)
Q Consensus       654 FGla~~~~~~~  664 (675)
                      ||+|+.+..++
T Consensus       162 FGla~~~~~~~  172 (299)
T 4g31_A          162 FGLVTAMDQDE  172 (299)
T ss_dssp             CCCC-------
T ss_pred             CccceecCCCc
Confidence            99999886543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.98  E-value=2.1e-32  Score=282.44  Aligned_cols=157  Identities=30%  Similarity=0.451  Sum_probs=133.0

Q ss_pred             ceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeEEEEE
Q 005825          511 SMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE----QGEKILIL  583 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~----~~~~~lV~  583 (675)
                      ++.++||+|+||+||+|+.. +++.||||++...  .....+.|.+|+.++++++|||||++++++.+    ++..+|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            66788999999999999875 5889999999753  23345679999999999999999999999875    34579999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc-CCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD-RDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DFGla~~~~~  662 (675)
                      |||++|+|.+++.   +...+++..+..|+.||+.||+|||+++ ++||||||||+||||+ +++.+||+|||+|+....
T Consensus       109 Ey~~gg~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          109 ELMTSGTLKTYLK---RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             ECCCSCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            9999999999994   3457899999999999999999999874 3599999999999998 479999999999987543


Q ss_pred             CcccCCCCceecC
Q 005825          663 DELQGNTKRIVGT  675 (675)
Q Consensus       663 ~~~~~~~~~~~GT  675 (675)
                      ..    +++++||
T Consensus       185 ~~----~~~~~GT  193 (290)
T 3fpq_A          185 SF----AKAVIGT  193 (290)
T ss_dssp             TS----BEESCSS
T ss_pred             Cc----cCCcccC
Confidence            32    3346776

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.98  E-value=3.2e-32  Score=278.64  Aligned_cols=158  Identities=27%  Similarity=0.486  Sum_probs=126.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.+.||+|+||+||+|+. .+++.||||++++.   .....+.+.+|+.++++++|||||++++++.+++..++||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6899999999999999999986 46999999999753   2334567999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+ +|+|.+++.   +...+++.+...++.||+.||+|||+++   |+||||||+||||++++++||+|||+|+.....
T Consensus        93 Ey~-~g~L~~~l~---~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  165 (275)
T 3hyh_A           93 EYA-GNELFDYIV---QRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             ECC-CEEHHHHHH---HSCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred             eCC-CCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence            999 689999884   3456899999999999999999999998   999999999999999999999999999987544


Q ss_pred             cccCCCCceecC
Q 005825          664 ELQGNTKRIVGT  675 (675)
Q Consensus       664 ~~~~~~~~~~GT  675 (675)
                      ..   ..+.+||
T Consensus       166 ~~---~~~~~GT  174 (275)
T 3hyh_A          166 NF---LKTSCGS  174 (275)
T ss_dssp             ------------
T ss_pred             Cc---cCCeeEC
Confidence            32   2335666

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.98  E-value=1.9e-32  Score=287.73  Aligned_cols=158  Identities=27%  Similarity=0.337  Sum_probs=133.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .+.|++.++||+|+||+||+|+.. +|+.||||+++....     +.+|+.++++++|||||++++++.+++..+|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            356888899999999999999874 589999999975322     24699999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-CeEEeeeccceecCCCc
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLARMFGGDE  664 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DFGla~~~~~~~  664 (675)
                      ++||+|.+++.   +.+.+++.+...|+.||+.||+|||+++   ||||||||+||||+.++ ++||+|||+|+.+..+.
T Consensus       132 ~~gg~L~~~l~---~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~  205 (336)
T 4g3f_A          132 LEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG  205 (336)
T ss_dssp             CTTCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred             cCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence            99999999994   3456999999999999999999999987   99999999999999987 69999999999986554


Q ss_pred             ccC---CCCceecC
Q 005825          665 LQG---NTKRIVGT  675 (675)
Q Consensus       665 ~~~---~~~~~~GT  675 (675)
                      ...   ....++||
T Consensus       206 ~~~~~~~~~~~~GT  219 (336)
T 4g3f_A          206 LGKSLLTGDYIPGT  219 (336)
T ss_dssp             --------CCCCCC
T ss_pred             cccceecCCccccC
Confidence            221   22346777

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.98  E-value=2.4e-32  Score=285.10  Aligned_cols=162  Identities=28%  Similarity=0.373  Sum_probs=130.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC----eEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG----EKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~----~~~lV~  583 (675)
                      ++|.+.++||+|+||+||+|++ +|+.||||+++.... ....+..|+..+.+++|||||+++|+|.+.+    ..+|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            4678889999999999999998 689999999975321 1223345666667899999999999998764    579999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-----CCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-----SRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-----~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      |||++|+|.++++.    ..++|..++.|+.|+++||+|||++     +.++||||||||+||||++++++||+|||+|+
T Consensus        81 Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~  156 (303)
T 3hmm_A           81 DYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             ECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             cCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence            99999999999953    3589999999999999999999986     23469999999999999999999999999999


Q ss_pred             ecCCCcc--cCCCCceecC
Q 005825          659 MFGGDEL--QGNTKRIVGT  675 (675)
Q Consensus       659 ~~~~~~~--~~~~~~~~GT  675 (675)
                      .......  ...+.+.+||
T Consensus       157 ~~~~~~~~~~~~~~~~~GT  175 (303)
T 3hmm_A          157 RHDSATDTIDIAPNHRVGT  175 (303)
T ss_dssp             EEETTTTEESCC-----CC
T ss_pred             cccCCCCceeeeccccccc
Confidence            8855432  2223345676

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.98  E-value=6e-33  Score=287.99  Aligned_cols=160  Identities=27%  Similarity=0.347  Sum_probs=131.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc----CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ++|++.++||+|+||+||+|+..    .++.||||++++..  .....++.+|+.+|++++|||||++++++.+.+..+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            57999999999999999999762    47899999997542  2334578899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||++||+|.+++.   +...+++.+...++.||+.||+|||+++   |+||||||+|||+++++++||+|||+|+.+.
T Consensus       104 vmEy~~gg~L~~~l~---~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLS---KEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             EECCCTTCEEHHHHH---HHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             EEEcCCCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            999999999999994   3457899999999999999999999998   9999999999999999999999999999775


Q ss_pred             CCcccCCCCceecC
Q 005825          662 GDELQGNTKRIVGT  675 (675)
Q Consensus       662 ~~~~~~~~~~~~GT  675 (675)
                      ..+..  ..+.+||
T Consensus       178 ~~~~~--~~~~~GT  189 (304)
T 3ubd_A          178 DHEKK--AYSFCGT  189 (304)
T ss_dssp             ---CC--CCSCCCC
T ss_pred             CCCcc--ccccccC
Confidence            44332  3346776

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.97  E-value=4.7e-32  Score=287.81  Aligned_cols=169  Identities=28%  Similarity=0.391  Sum_probs=141.9

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEEcC------CcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCC-CceeeEEEEEEe
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQH-RNLVRILGCCIE  575 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~~~------g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H-~nIv~l~g~~~~  575 (675)
                      +...++|++.++||+|+||+||+|++..      ++.||||+++.... ...++|.+|+.+|.++.| ||||+++|+|.+
T Consensus        60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~  139 (353)
T 4ase_A           60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK  139 (353)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence            3456889999999999999999998643      36899999986433 345679999999999965 999999999977


Q ss_pred             C-CeEEEEEEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCE
Q 005825          576 Q-GEKILILEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNV  641 (675)
Q Consensus       576 ~-~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NI  641 (675)
                      . +..+||||||++|+|.++|+...             ....++|.+++.|+.|||+||+|||+++   ||||||||+||
T Consensus       140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NI  216 (353)
T 4ase_A          140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNI  216 (353)
T ss_dssp             TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGE
T ss_pred             cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccce
Confidence            5 56899999999999999996422             1345899999999999999999999987   99999999999


Q ss_pred             EEcCCCCeEEeeeccceecCCCcccCCCCceecC
Q 005825          642 LLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       642 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~GT  675 (675)
                      ||++++.+||+|||+|+.+..+.....+...+||
T Consensus       217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt  250 (353)
T 4ase_A          217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP  250 (353)
T ss_dssp             EECGGGCEEECCCGGGSCTTTCTTSEEETTEEEC
T ss_pred             eeCCCCCEEECcchhhhhcccCCCceeecccccc
Confidence            9999999999999999988665544344455665

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.96  E-value=8.4e-30  Score=275.09  Aligned_cols=162  Identities=25%  Similarity=0.410  Sum_probs=135.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEe------CC
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIE------QG  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~------~~  577 (675)
                      .++|++.++||+|+||+||+|+. .+|+.||||+++...  ....+.+.+|+.+|++++|||||++++++..      .+
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            36799999999999999999987 469999999997542  2335678899999999999999999999864      35


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      ..|||||||+ |+|.+++.   ....+++.+...|+.||+.||+|||+++   ||||||||+|||++.++.+||+|||+|
T Consensus       133 ~~~ivmE~~~-g~L~~~i~---~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla  205 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMA  205 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHT---SSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             EEEEEEeCCC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeeccee
Confidence            7899999996 67999984   3457999999999999999999999998   999999999999999999999999999


Q ss_pred             eecCCCc--ccCCCCceecC
Q 005825          658 RMFGGDE--LQGNTKRIVGT  675 (675)
Q Consensus       658 ~~~~~~~--~~~~~~~~~GT  675 (675)
                      +.+....  ........+||
T Consensus       206 ~~~~~~~~~~~~~~~~~~GT  225 (398)
T 4b99_A          206 RGLCTSPAEHQYFMTEYVAT  225 (398)
T ss_dssp             BCC-------CCCCCSSCCC
T ss_pred             eecccCccccccccccceeC
Confidence            9875432  22234456776

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.96  E-value=2.2e-29  Score=283.94  Aligned_cols=159  Identities=29%  Similarity=0.352  Sum_probs=136.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHH---HHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKN---EMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~---E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .++|++.++||+|+||+||+|+.. +|+.||||++++.   .......+.+   ++.+++.++|||||++++++.+.+..
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            368999999999999999999875 5999999999753   1223333444   46677778999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ||||||++||+|..+|.   +...+++.....++.||+.||+|||+++   ||||||||+||||+++|++||+|||+|+.
T Consensus       268 ylVmEy~~GGdL~~~l~---~~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~  341 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACD  341 (689)
T ss_dssp             EEEECCCCSCBHHHHHH---HHCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEecCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeee
Confidence            99999999999999994   3456899999999999999999999988   99999999999999999999999999998


Q ss_pred             cCCCcccCCCCceecC
Q 005825          660 FGGDELQGNTKRIVGT  675 (675)
Q Consensus       660 ~~~~~~~~~~~~~~GT  675 (675)
                      +....    +.+.+||
T Consensus       342 ~~~~~----~~t~~GT  353 (689)
T 3v5w_A          342 FSKKK----PHASVGT  353 (689)
T ss_dssp             CSSCC----CCSCCSC
T ss_pred             cCCCC----CCCccCC
Confidence            86543    2345777

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.96  E-value=4.2e-29  Score=266.65  Aligned_cols=149  Identities=26%  Similarity=0.398  Sum_probs=132.7

Q ss_pred             HHHhcCCcceeeeeCCcCceeEEEEEEc----CCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC
Q 005825          503 VAAATENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQG  577 (675)
Q Consensus       503 ~~~~~~~f~~~~~IG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~  577 (675)
                      +....+.|++.++||+|+||+||+|+..    .++.||||++.+.  ....++.+|+++|.++ +|||||++++++.+.+
T Consensus        16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~   93 (361)
T 4f9c_A           16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKND   93 (361)
T ss_dssp             SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred             cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence            3445688999999999999999999753    4678999998753  3456788999999998 6999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC-CCeEEeeecc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGL  656 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DFGl  656 (675)
                      +.+|||||+++|+|.+++.      .+++.+...++.||+.||+|||+++   |+||||||+|||++.+ +.+||+|||+
T Consensus        94 ~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGl  164 (361)
T 4f9c_A           94 HVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGL  164 (361)
T ss_dssp             EEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence            9999999999999999982      3788999999999999999999998   9999999999999876 7999999999


Q ss_pred             ceecCC
Q 005825          657 ARMFGG  662 (675)
Q Consensus       657 a~~~~~  662 (675)
                      |+.+..
T Consensus       165 a~~~~~  170 (361)
T 4f9c_A          165 AQGTHD  170 (361)
T ss_dssp             CEECTT
T ss_pred             CcccCC
Confidence            997754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.96  E-value=1.2e-28  Score=278.83  Aligned_cols=161  Identities=23%  Similarity=0.388  Sum_probs=141.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .++|++.+.||+|+||+||+|+.. +|+.||||.+........+.+.+|+.+|++++|||||++++++.+.+..+|||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            368999999999999999999874 5999999999865555567899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC--CCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD--MNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~--~~~kl~DFGla~~~~~~  663 (675)
                      |++|+|.+++..  +...+++.+...++.||+.||+|||+++   |+||||||+|||++.+  +.+||+|||+|+.+...
T Consensus       236 ~~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~  310 (573)
T 3uto_A          236 MSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  310 (573)
T ss_dssp             CCCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred             cCCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence            999999999853  2346889999999999999999999998   9999999999999854  89999999999998655


Q ss_pred             cccCCCCceecC
Q 005825          664 ELQGNTKRIVGT  675 (675)
Q Consensus       664 ~~~~~~~~~~GT  675 (675)
                      +.   ....+||
T Consensus       311 ~~---~~~~~GT  319 (573)
T 3uto_A          311 QS---VKVTTGT  319 (573)
T ss_dssp             SE---EEEECSS
T ss_pred             Cc---eeeeEEC
Confidence            42   2334665

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.94  E-value=2.3e-27  Score=249.44  Aligned_cols=158  Identities=42%  Similarity=0.720  Sum_probs=143.2

Q ss_pred             HHHHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          502 SVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       502 ~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ++...+++|++.+.||+|+||.||+|+..+++.||||++........+++.+|+.++++++||||+++++++.+.+..++
T Consensus        33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  112 (321)
T 2qkw_B           33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL  112 (321)
T ss_dssp             CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred             HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence            34457789999999999999999999988899999999987666667889999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCC-cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          582 ILEYMPNKSLDVFLFDPTK-KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||||+++++|.+++..... ...+++..++.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++..
T Consensus       113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  189 (321)
T 2qkw_B          113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKG  189 (321)
T ss_dssp             EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred             EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccccccc
Confidence            9999999999999864322 335899999999999999999999987   999999999999999999999999999976


Q ss_pred             CC
Q 005825          661 GG  662 (675)
Q Consensus       661 ~~  662 (675)
                      ..
T Consensus       190 ~~  191 (321)
T 2qkw_B          190 TE  191 (321)
T ss_dssp             SS
T ss_pred             cc
Confidence            54

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.94  E-value=5.3e-27  Score=256.91  Aligned_cols=160  Identities=19%  Similarity=0.269  Sum_probs=140.5

Q ss_pred             HHHHHHhcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe
Q 005825          500 LASVAAATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE  575 (675)
Q Consensus       500 ~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~  575 (675)
                      +.++....++|++.++||+|+||+||+|+... ++.||||++++.   .....+.+.+|+.++..++||||+++++++.+
T Consensus        66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD  145 (437)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            34445567899999999999999999999764 789999999752   22334458999999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      .+..+|||||+++|+|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+||||+.++++||+|||
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFG  220 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFG  220 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchh
Confidence            99999999999999999999542  346899999999999999999999988   9999999999999999999999999


Q ss_pred             cceecCCCc
Q 005825          656 LARMFGGDE  664 (675)
Q Consensus       656 la~~~~~~~  664 (675)
                      +|+.+..+.
T Consensus       221 la~~~~~~~  229 (437)
T 4aw2_A          221 SCLKLMEDG  229 (437)
T ss_dssp             TCEECCTTS
T ss_pred             hhhhcccCC
Confidence            998876544

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.94  E-value=2.2e-26  Score=239.54  Aligned_cols=152  Identities=26%  Similarity=0.434  Sum_probs=138.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ..++|++.++||+|+||.||+|+. .+++.||||++........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            346899999999999999999986 5689999999986666667889999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+++++|.+++..    ..+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+....
T Consensus        98 ~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (297)
T 3fxz_A           98 YLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (297)
T ss_dssp             CCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             CCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence            9999999999843    35889999999999999999999997   9999999999999999999999999999876544

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.94  E-value=1.8e-26  Score=241.33  Aligned_cols=152  Identities=28%  Similarity=0.482  Sum_probs=138.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .++|++.++||+|+||+||+++.. +++.||+|++........+.|.+|+.++++++||||+++++++.+.+..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            468899999999999999999875 5899999999776666778899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++...  ...+++.++..++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+++.+...
T Consensus        89 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  161 (310)
T 3s95_A           89 IKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDE  161 (310)
T ss_dssp             CTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred             cCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence            9999999999542  346899999999999999999999998   999999999999999999999999999987544

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.94  E-value=3.1e-26  Score=241.17  Aligned_cols=160  Identities=29%  Similarity=0.408  Sum_probs=142.8

Q ss_pred             cccHHHHHHhcCC----------cceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCc
Q 005825          497 LFSLASVAAATEN----------FSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN  565 (675)
Q Consensus       497 ~~~~~~~~~~~~~----------f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~n  565 (675)
                      .+++.++..+++.          |...++||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n  103 (321)
T 2c30_A           24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN  103 (321)
T ss_dssp             -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred             cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence            3566666655543          777889999999999999876 69999999998766667788999999999999999


Q ss_pred             eeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC
Q 005825          566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR  645 (675)
Q Consensus       566 Iv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~  645 (675)
                      |+++++++...+..++||||+++++|.+++..    ..+++..+..++.|++.||+|||+++   |+||||||+|||++.
T Consensus       104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~  176 (321)
T 2c30_A          104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTL  176 (321)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECT
T ss_pred             cceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECC
Confidence            99999999999999999999999999999842    35899999999999999999999987   999999999999999


Q ss_pred             CCCeEEeeeccceecCCC
Q 005825          646 DMNPKISDFGLARMFGGD  663 (675)
Q Consensus       646 ~~~~kl~DFGla~~~~~~  663 (675)
                      ++.+||+|||+++.+..+
T Consensus       177 ~~~~kl~Dfg~~~~~~~~  194 (321)
T 2c30_A          177 DGRVKLSDFGFCAQISKD  194 (321)
T ss_dssp             TCCEEECCCTTCEECCSS
T ss_pred             CCcEEEeeeeeeeecccC
Confidence            999999999999987654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.94  E-value=2.5e-26  Score=241.94  Aligned_cols=154  Identities=25%  Similarity=0.387  Sum_probs=135.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-------  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-------  577 (675)
                      .++|++.++||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            467999999999999999999885 68999999997533 334578999999999999999999999987654       


Q ss_pred             --------------------------------------------------eEEEEEEecCCCCHHHHhcCCCCcccCCHH
Q 005825          578 --------------------------------------------------EKILILEYMPNKSLDVFLFDPTKKRLLGWQ  607 (675)
Q Consensus       578 --------------------------------------------------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~  607 (675)
                                                                        ..++||||+++++|.+++..........+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                              279999999999999999776555667788


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          608 ARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       608 ~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      .++.++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~  217 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD  217 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC
T ss_pred             HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccc
Confidence            88999999999999999987   999999999999999999999999999988654

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.94  E-value=1.5e-26  Score=245.07  Aligned_cols=150  Identities=25%  Similarity=0.315  Sum_probs=135.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.+.||+|+||+||+++.. +++.||||++++.   .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            368999999999999999999875 5899999999753   234567899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++|+|..++.   ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++++||+|||+|+....
T Consensus        84 ~E~~~gg~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  157 (337)
T 1o6l_A           84 MEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EECCTTCBHHHHHH---HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             EeCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence            99999999999984   3456889999999999999999999987   99999999999999999999999999987543

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.94  E-value=1.2e-26  Score=244.99  Aligned_cols=152  Identities=30%  Similarity=0.471  Sum_probs=136.8

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++...  .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            347899999999999999999987 57999999999753  233456788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++..   ...+++.....++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus        93 ~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  166 (328)
T 3fe3_A           93 MEYASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTV  166 (328)
T ss_dssp             ECCCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred             EECCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence            999999999999843   356889999999999999999999987   99999999999999999999999999987754


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       167 ~  167 (328)
T 3fe3_A          167 G  167 (328)
T ss_dssp             S
T ss_pred             C
Confidence            4

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.94  E-value=8.6e-27  Score=245.46  Aligned_cols=169  Identities=43%  Similarity=0.708  Sum_probs=148.6

Q ss_pred             CCcccHHHHHHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEE
Q 005825          495 LPLFSLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCC  573 (675)
Q Consensus       495 ~~~~~~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~  573 (675)
                      ...+++.++....++|++.++||+|+||.||+|+..+++.||||+++.... .....+.+|+.++++++||||+++++++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   96 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC   96 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence            456788899999999999999999999999999988899999999986432 2344799999999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEe
Q 005825          574 IEQGEKILILEYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       574 ~~~~~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                      .+.+..++||||+++++|.+++.... ....+++..+..|+.|++.||+|||+++..+|+||||||+|||+++++.+||+
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~  176 (326)
T 3uim_A           97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG  176 (326)
T ss_dssp             CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred             ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence            99999999999999999999997543 34468999999999999999999999833349999999999999999999999


Q ss_pred             eeccceecCCC
Q 005825          653 DFGLARMFGGD  663 (675)
Q Consensus       653 DFGla~~~~~~  663 (675)
                      |||+|+.+...
T Consensus       177 Dfg~~~~~~~~  187 (326)
T 3uim_A          177 DFGLAKLMDYK  187 (326)
T ss_dssp             CCSSCEECCSS
T ss_pred             cCccccccCcc
Confidence            99999987544

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.94  E-value=1.9e-26  Score=243.06  Aligned_cols=151  Identities=32%  Similarity=0.420  Sum_probs=133.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            468999999999999999999875 68999999987532 2334678999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |+++++|.+++.   ....+++.++..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus        86 ~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~  158 (323)
T 3tki_A           86 YCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (323)
T ss_dssp             CCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             cCCCCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence            999999999984   3446899999999999999999999987   999999999999999999999999999987543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.94  E-value=8e-27  Score=253.51  Aligned_cols=156  Identities=22%  Similarity=0.272  Sum_probs=138.1

Q ss_pred             HHHHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC
Q 005825          502 SVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG  577 (675)
Q Consensus       502 ~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~  577 (675)
                      .+....++|++.++||+|+||+||+++.. +++.||||++++.   .....+.+.+|+.+++.++||||+++++++.+.+
T Consensus        63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            34456689999999999999999999875 4889999999752   2234456889999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      ..++||||+++|+|.+++..    ..+++..+..++.||+.||+|||+++   |+||||||+|||++.++++||+|||+|
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a  215 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTC  215 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEecccee
Confidence            99999999999999999843    35888999999999999999999987   999999999999999999999999999


Q ss_pred             eecCCCc
Q 005825          658 RMFGGDE  664 (675)
Q Consensus       658 ~~~~~~~  664 (675)
                      +.+....
T Consensus       216 ~~~~~~~  222 (410)
T 3v8s_A          216 MKMNKEG  222 (410)
T ss_dssp             EECCTTS
T ss_pred             EeeccCC
Confidence            9886543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.94  E-value=4e-26  Score=238.13  Aligned_cols=165  Identities=41%  Similarity=0.616  Sum_probs=147.5

Q ss_pred             CCcccHHHHHHhcCCccee------eeeCCcCceeEEEEEEcCCcEEEEEEecCcC----ccCHHHHHHHHHHHHhcCCC
Q 005825          495 LPLFSLASVAAATENFSME------CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHR  564 (675)
Q Consensus       495 ~~~~~~~~~~~~~~~f~~~------~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~----~~~~~~f~~E~~il~~l~H~  564 (675)
                      .+.+++.++..++++|...      ++||+|+||.||+|+. +++.||||++....    ....+.+.+|+.++++++||
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~   90 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE   90 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence            4568889999999999877      8999999999999987 67899999987532    23356799999999999999


Q ss_pred             ceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc
Q 005825          565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD  644 (675)
Q Consensus       565 nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~  644 (675)
                      ||+++++++.+.+..++||||+++++|.+++........+++..+..++.||+.||+|||+++   |+||||||+||+++
T Consensus        91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~  167 (307)
T 2nru_A           91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLD  167 (307)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEC
T ss_pred             CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEc
Confidence            999999999999999999999999999999965444567899999999999999999999987   99999999999999


Q ss_pred             CCCCeEEeeeccceecCCC
Q 005825          645 RDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       645 ~~~~~kl~DFGla~~~~~~  663 (675)
                      +++.+||+|||+++.....
T Consensus       168 ~~~~~kl~Dfg~~~~~~~~  186 (307)
T 2nru_A          168 EAFTAKISDFGLARASEKF  186 (307)
T ss_dssp             TTCCEEECCCTTCEECCSC
T ss_pred             CCCcEEEeecccccccccc
Confidence            9999999999999987543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.94  E-value=2.3e-26  Score=247.05  Aligned_cols=155  Identities=30%  Similarity=0.530  Sum_probs=135.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc--------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeC
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL--------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQ  576 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~  576 (675)
                      .++|++.+.||+|+||.||+|+..        ++..||||+++... ....+++.+|+.+++++ +||||+++++++.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            468999999999999999999863        35579999998643 23456899999999999 899999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE
Q 005825          577 GEKILILEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL  643 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl  643 (675)
                      +..++||||+++|+|.+++....             ....+++.+++.++.||+.||+|||+++   |+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence            99999999999999999996432             1235789999999999999999999987   9999999999999


Q ss_pred             cCCCCeEEeeeccceecCCCc
Q 005825          644 DRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       644 ~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ++++.+||+|||+|+.+....
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~  257 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNID  257 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCC
T ss_pred             CCCCCEEEccccCCcccCccc
Confidence            999999999999999875543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.94  E-value=1.9e-26  Score=246.04  Aligned_cols=151  Identities=28%  Similarity=0.398  Sum_probs=134.4

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~  580 (675)
                      ..++|++.++||+|+||+||+++.. +++.||||++++.   .....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            3578999999999999999999875 5899999999753   234566788999999988 6999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||+++|+|..++.   ....+++..+..++.||+.||+|||+++   |+||||||+||||+.++++||+|||+|+..
T Consensus       101 lv~E~~~gg~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQ---KSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             EEEECCCSCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EEEeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeec
Confidence            9999999999999984   3456899999999999999999999997   999999999999999999999999999865


Q ss_pred             CC
Q 005825          661 GG  662 (675)
Q Consensus       661 ~~  662 (675)
                      ..
T Consensus       175 ~~  176 (353)
T 3txo_A          175 IC  176 (353)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.94  E-value=1.2e-26  Score=252.41  Aligned_cols=160  Identities=21%  Similarity=0.285  Sum_probs=140.2

Q ss_pred             HHHHHHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe
Q 005825          500 LASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE  575 (675)
Q Consensus       500 ~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~  575 (675)
                      +.+.....++|++.++||+|+||+||+++.. +++.||||++++.   .....+.+.+|..++.+++||||+++++++.+
T Consensus        53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  132 (412)
T 2vd5_A           53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD  132 (412)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence            3344456789999999999999999999875 6899999999752   12334568899999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      .+..++||||+++|+|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||+++++++||+|||
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFG  207 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFG  207 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeech
Confidence            99999999999999999999532  236889999999999999999999987   9999999999999999999999999


Q ss_pred             cceecCCCc
Q 005825          656 LARMFGGDE  664 (675)
Q Consensus       656 la~~~~~~~  664 (675)
                      +|+.+..+.
T Consensus       208 la~~~~~~~  216 (412)
T 2vd5_A          208 SCLKLRADG  216 (412)
T ss_dssp             TCEECCTTS
T ss_pred             hheeccCCC
Confidence            999886543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.94  E-value=2.8e-26  Score=248.01  Aligned_cols=148  Identities=24%  Similarity=0.371  Sum_probs=131.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|++.++||+|+||+||+++.. +++.||||++++..   ....+.+..|..++.++ +||||+++++++.+.+..++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            468999999999999999999875 48899999997542   23445688999999887 89999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||||+++|+|..++.   ....+++..+..++.||+.||+|||+++   |+||||||+||||+.++++||+|||+|+..
T Consensus       131 V~E~~~gg~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             EEECCTTCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEcCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            999999999999984   3456899999999999999999999998   999999999999999999999999999874

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.93  E-value=4e-26  Score=245.83  Aligned_cols=151  Identities=23%  Similarity=0.354  Sum_probs=136.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.+.||+|+||.||+++.. +++.||||.+.+.   .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            368999999999999999999875 4889999998753   234567899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++|+|..++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus        94 ~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  167 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR  167 (384)
T ss_dssp             ECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence            999999999999953   456899999999999999999999998   99999999999999999999999999998754


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       168 ~  168 (384)
T 4fr4_A          168 E  168 (384)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.93  E-value=2.8e-26  Score=241.50  Aligned_cols=164  Identities=32%  Similarity=0.478  Sum_probs=136.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC----eEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG----EKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~----~~~l  581 (675)
                      ..++|++.++||+|+||.||+|+.. ++.||||+++.. ......+..|+.++++++||||+++++++.+..    ..++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            3478999999999999999999875 789999999753 233445667999999999999999999998754    4799


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-------CCCceEecCCCCCCEEEcCCCCeEEeee
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-------SRFRIIHRDLKASNVLLDRDMNPKISDF  654 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------~~~~iiHrDlkp~NILl~~~~~~kl~DF  654 (675)
                      ||||+++|+|.+++..    ..+++..+..++.|++.||+|||+.       +..+|+||||||+|||+++++.+||+||
T Consensus       100 v~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF  175 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF  175 (322)
T ss_dssp             EEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred             EEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence            9999999999999943    3489999999999999999999987       1113999999999999999999999999


Q ss_pred             ccceecCCCcccCCCCceecC
Q 005825          655 GLARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       655 Gla~~~~~~~~~~~~~~~~GT  675 (675)
                      |+|+.+............+||
T Consensus       176 g~a~~~~~~~~~~~~~~~~gt  196 (322)
T 3soc_A          176 GLALKFEAGKSAGDTHGQVGT  196 (322)
T ss_dssp             TTCEEECTTSCCCCCTTCCCC
T ss_pred             CcccccccccCccccccCccC
Confidence            999988655443333334444

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.93  E-value=1.2e-25  Score=240.54  Aligned_cols=152  Identities=29%  Similarity=0.404  Sum_probs=136.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc------cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG------QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      ..+.|++.+.||+|+||.||+++.. +++.||||.++....      ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            3468999999999999999999875 589999999975432      135789999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC----CeEEeee
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM----NPKISDF  654 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DF  654 (675)
                      .++||||+++|+|.+++.   ....+++..+..++.||+.||.|||+++   |+||||||+|||+++++    .+||+||
T Consensus        90 ~~lv~e~~~gg~L~~~l~---~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DF  163 (361)
T 2yab_A           90 VVLILELVSGGELFDFLA---QKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDF  163 (361)
T ss_dssp             EEEEEECCCSCBHHHHHT---TCSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred             EEEEEEcCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEec
Confidence            999999999999999994   3456899999999999999999999987   99999999999998877    7999999


Q ss_pred             ccceecCCC
Q 005825          655 GLARMFGGD  663 (675)
Q Consensus       655 Gla~~~~~~  663 (675)
                      |+|+.+...
T Consensus       164 G~a~~~~~~  172 (361)
T 2yab_A          164 GLAHEIEDG  172 (361)
T ss_dssp             SSCEECCTT
T ss_pred             CCceEcCCC
Confidence            999987654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.93  E-value=4.4e-26  Score=242.28  Aligned_cols=151  Identities=25%  Similarity=0.368  Sum_probs=134.5

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~  579 (675)
                      ...++|.+.+.||+|+||.||+|+.. +++.||||++++..   ....+.+..|..++.++ +||||+++++++.+.+..
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            35689999999999999999999875 58999999997532   34567788999999887 899999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++|+|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++++||+|||+|+.
T Consensus        94 ~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~  167 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKE  167 (345)
T ss_dssp             EEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence            999999999999999843   346899999999999999999999997   99999999999999999999999999987


Q ss_pred             cC
Q 005825          660 FG  661 (675)
Q Consensus       660 ~~  661 (675)
                      ..
T Consensus       168 ~~  169 (345)
T 1xjd_A          168 NM  169 (345)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.93  E-value=5.9e-26  Score=238.66  Aligned_cols=150  Identities=29%  Similarity=0.422  Sum_probs=135.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.+.||+|+||.||+++.. +++.||+|++++.   .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            367999999999999999999875 6899999999753   234567788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++|+|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++++||+|||+|+....
T Consensus        85 ~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A           85 MDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             ECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             EeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence            999999999999943   346889999999999999999999987   99999999999999999999999999998754

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.93  E-value=5.5e-26  Score=236.08  Aligned_cols=151  Identities=28%  Similarity=0.460  Sum_probs=134.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.++||+|+||.||+++.. +++.||+|.+....   ....+.|.+|+.++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            478999999999999999999864 58999999986432   23356789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++.   ....+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus        90 ~e~~~g~~L~~~l~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A           90 MEYIEGPTLSEYIE---SHGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSE  163 (294)
T ss_dssp             EECCCSCBHHHHHH---HHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC--
T ss_pred             EeCCCCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccccc
Confidence            99999999999984   3456899999999999999999999987   99999999999999999999999999987754


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       164 ~  164 (294)
T 4eqm_A          164 T  164 (294)
T ss_dssp             -
T ss_pred             c
Confidence            3

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.93  E-value=6.1e-26  Score=241.31  Aligned_cols=148  Identities=25%  Similarity=0.365  Sum_probs=132.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ++|++.+.||+|+||.||+++.. +++.||||++++..   ....+.+.+|..++.++ +||||+++++++.+.+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            57999999999999999999875 58899999997542   23345688999999988 899999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |||+++|+|..++.   ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++++||+|||+|+...
T Consensus        89 ~e~~~gg~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~  161 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQ---RQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL  161 (345)
T ss_dssp             ECCCCSCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred             EeCCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEecccccccc
Confidence            99999999999984   3346899999999999999999999997   9999999999999999999999999998753

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.93  E-value=4.9e-26  Score=243.87  Aligned_cols=151  Identities=19%  Similarity=0.233  Sum_probs=133.0

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEE------EcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC---CCceeeEEEEEEe
Q 005825          505 AATENFSMECKLGEGGFGPVYKGR------LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ---HRNLVRILGCCIE  575 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~---H~nIv~l~g~~~~  575 (675)
                      ...++|.+.++||+|+||.||+|+      ..+++.||||+++..   ...++..|+.++.+++   |+||+++++++..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            345789999999999999999994      456889999999753   4567888999888887   9999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCC--CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC--------
Q 005825          576 QGEKILILEYMPNKSLDVFLFDP--TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR--------  645 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~--------  645 (675)
                      .+..++||||+++|+|.+++...  .....+++..++.|+.||+.||+|||+++   |+||||||+||||+.        
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~  215 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDE  215 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC---
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcccc
Confidence            99999999999999999999532  13456999999999999999999999987   999999999999998        


Q ss_pred             ---CCCeEEeeeccceecC
Q 005825          646 ---DMNPKISDFGLARMFG  661 (675)
Q Consensus       646 ---~~~~kl~DFGla~~~~  661 (675)
                         ++.+||+|||+|+.+.
T Consensus       216 ~~~~~~~kl~DFG~a~~~~  234 (365)
T 3e7e_A          216 DDLSAGLALIDLGQSIDMK  234 (365)
T ss_dssp             ---CTTEEECCCTTCEEGG
T ss_pred             ccccCCEEEeeCchhhhhh
Confidence               8999999999998764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.93  E-value=5.2e-26  Score=238.11  Aligned_cols=156  Identities=30%  Similarity=0.548  Sum_probs=132.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..++|++.++||+|+||.||+|+. +++.||||++....  ....+++.+|+.++++++||||+++++++.+.+..++||
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT  113 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred             ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence            457899999999999999999987 68899999997543  233567999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++++|.+++........+++..++.++.||+.||+|||+++ .+|+||||||+|||+++++.+||+|||+|+.....
T Consensus       114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  192 (309)
T 3p86_A          114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST  192 (309)
T ss_dssp             ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred             ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence            99999999999965443445899999999999999999999874 34999999999999999999999999999876443

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.93  E-value=6.4e-26  Score=239.33  Aligned_cols=150  Identities=28%  Similarity=0.387  Sum_probs=125.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE----cCCcEEEEEEecCcC----ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL----LNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      .++|++.++||+|+||.||+++.    .+++.||||++++..    ......+.+|+.++++++||||+++++++.+.+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            46899999999999999999987    468999999997642    2345668899999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++||||+++++|.+++.   ....+++.....++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+
T Consensus        96 ~~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~  169 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLE---REGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK  169 (327)
T ss_dssp             EEEEEECCTTEEHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred             EEEEEeCCCCCcHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccc
Confidence            999999999999999984   3446888999999999999999999997   9999999999999999999999999998


Q ss_pred             ecCC
Q 005825          659 MFGG  662 (675)
Q Consensus       659 ~~~~  662 (675)
                      ....
T Consensus       170 ~~~~  173 (327)
T 3a62_A          170 ESIH  173 (327)
T ss_dssp             ----
T ss_pred             cccc
Confidence            7543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.93  E-value=8.1e-26  Score=241.03  Aligned_cols=150  Identities=27%  Similarity=0.330  Sum_probs=134.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCc---CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~  580 (675)
                      ..++|++.+.||+|+||+||+++... ++.||||++++.   .....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            35789999999999999999998764 789999999753   234567788999999988 7999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||+++|+|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++++||+|||+|+..
T Consensus        98 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence            99999999999999843   346899999999999999999999997   999999999999999999999999999875


Q ss_pred             C
Q 005825          661 G  661 (675)
Q Consensus       661 ~  661 (675)
                      .
T Consensus       172 ~  172 (353)
T 2i0e_A          172 I  172 (353)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.93  E-value=1e-25  Score=240.06  Aligned_cols=150  Identities=25%  Similarity=0.330  Sum_probs=135.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.+.||+|+||.||+++.. +++.||||++++.   .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            68999999999999999999875 5899999999753   2345678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++|+|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus       121 e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~  194 (350)
T 1rdq_E          121 EYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             ECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             cCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC
Confidence            99999999999943   346889999999999999999999988   999999999999999999999999999987543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.93  E-value=8.2e-26  Score=238.30  Aligned_cols=152  Identities=32%  Similarity=0.562  Sum_probs=134.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc----CCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|++.++||+|+||.||+|+..    .+..||||+++.. .....+.|.+|+.++++++||||+++++++.+.+..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            468999999999999999999874    3456999999864 33345679999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++++|.+++...  ...+++.++..|+.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus       128 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             EEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             EeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence            99999999999999542  346899999999999999999999997   9999999999999999999999999999885


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       203 ~~  204 (325)
T 3kul_A          203 DD  204 (325)
T ss_dssp             --
T ss_pred             cC
Confidence            54

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.93  E-value=1.9e-25  Score=234.66  Aligned_cols=155  Identities=28%  Similarity=0.438  Sum_probs=137.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC--eEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG--EKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~--~~~lV  582 (675)
                      .++|++.++||+|+||.||+|+... ++.||||+++... ....+.+.+|+.++++++||||+++++++....  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            3679999999999999999998754 8999999997543 345678899999999999999999999998765  78999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE----cCCCCeEEeeeccce
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL----DRDMNPKISDFGLAR  658 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DFGla~  658 (675)
                      |||+++++|.+++........+++.++..++.||+.||+|||+++   |+||||||+|||+    +.++.+||+|||+|+
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~  164 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence            999999999999976544445899999999999999999999997   9999999999999    788889999999999


Q ss_pred             ecCCCc
Q 005825          659 MFGGDE  664 (675)
Q Consensus       659 ~~~~~~  664 (675)
                      .+....
T Consensus       165 ~~~~~~  170 (319)
T 4euu_A          165 ELEDDE  170 (319)
T ss_dssp             ECCTTC
T ss_pred             ecCCCC
Confidence            886543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=2.6e-25  Score=234.05  Aligned_cols=151  Identities=21%  Similarity=0.313  Sum_probs=135.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .++|++.+.||+|+||.||+++.. +++.||+|.++.. ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            478999999999999999999875 5889999999753 33456789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC--CCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR--DMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++..  ....+++.++..++.||+.||+|||+++   |+||||||+|||++.  ++.+||+|||+++.+...
T Consensus        83 ~~g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~  157 (321)
T 1tki_A           83 ISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence            999999999943  2346899999999999999999999997   999999999999987  789999999999988544

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.93  E-value=1.2e-25  Score=230.11  Aligned_cols=151  Identities=32%  Similarity=0.567  Sum_probs=137.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.+.||+|+||.||+|+..+++.||||++... ....+++.+|+.++++++||||+++++++.+.+..++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccc-ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            3689999999999999999999988999999999863 344578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ++++|.+++...  ...+++..+..++.|++.||+|||+++   |+||||||+||+++.++.+||+|||+++.+...
T Consensus        88 ~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  159 (269)
T 4hcu_A           88 EHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  159 (269)
T ss_dssp             TTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred             CCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccc
Confidence            999999999542  346899999999999999999999998   999999999999999999999999999877543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.93  E-value=1.4e-25  Score=233.11  Aligned_cols=150  Identities=25%  Similarity=0.410  Sum_probs=128.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--------------------------cCHHHHHHHHHHHH
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--------------------------QGLEEFKNEMLLIA  559 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--------------------------~~~~~f~~E~~il~  559 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.....                          ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            478999999999999999999874 588999999875321                          12357899999999


Q ss_pred             hcCCCceeeEEEEEEe--CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCC
Q 005825          560 KLQHRNLVRILGCCIE--QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLK  637 (675)
Q Consensus       560 ~l~H~nIv~l~g~~~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk  637 (675)
                      +++||||+++++++.+  .+..++||||+++++|.+++    ....+++..+..++.||+.||+|||+++   |+|||||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlk  164 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP----TLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIK  164 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS----CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCC
Confidence            9999999999999987  56899999999999998765    2346899999999999999999999997   9999999


Q ss_pred             CCCEEEcCCCCeEEeeeccceecCCC
Q 005825          638 ASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       638 p~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |+|||++.++.+||+|||+|+.+...
T Consensus       165 p~Nil~~~~~~~kl~Dfg~~~~~~~~  190 (298)
T 2zv2_A          165 PSNLLVGEDGHIKIADFGVSNEFKGS  190 (298)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECSSS
T ss_pred             HHHEEECCCCCEEEecCCCccccccc
Confidence            99999999999999999999987543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.93  E-value=4.6e-26  Score=245.30  Aligned_cols=153  Identities=29%  Similarity=0.472  Sum_probs=136.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..++|.+.++||+|+||.||+|+.. +++.||||.++... ....++|.+|+.++++++||||+++++++.+.+..++||
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  191 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM  191 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence            3468899999999999999999986 68999999997542 233457899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++|+|.+++..  ....+++..++.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+.....
T Consensus       192 e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          192 ELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             ECCTTCBHHHHHHH--HGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred             EcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence            99999999999953  2345889999999999999999999998   999999999999999999999999999976543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.93  E-value=4.1e-25  Score=233.01  Aligned_cols=151  Identities=29%  Similarity=0.401  Sum_probs=135.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc------cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG------QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .+.|.+.+.||+|+||.||+++.. +++.||||.++....      ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            357999999999999999999875 589999999875322      2467899999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC----CeEEeeec
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM----NPKISDFG  655 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DFG  655 (675)
                      ++||||+++++|.+++.   ....+++..+..++.||+.||+|||+++   |+||||||+|||+++++    .+||+|||
T Consensus        90 ~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  163 (326)
T 2y0a_A           90 ILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG  163 (326)
T ss_dssp             EEEEECCCSCBHHHHHT---TSSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEEcCCCCCHHHHHH---hcCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence            99999999999999994   3456899999999999999999999987   99999999999999887    89999999


Q ss_pred             cceecCCC
Q 005825          656 LARMFGGD  663 (675)
Q Consensus       656 la~~~~~~  663 (675)
                      +|+.+...
T Consensus       164 ~a~~~~~~  171 (326)
T 2y0a_A          164 LAHKIDFG  171 (326)
T ss_dssp             TCEECCTT
T ss_pred             CCeECCCC
Confidence            99988543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.93  E-value=4.2e-26  Score=243.43  Aligned_cols=162  Identities=29%  Similarity=0.443  Sum_probs=137.9

Q ss_pred             cHHHHHHhcCCcceeeeeCCcCceeEEEEEE------cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEE
Q 005825          499 SLASVAAATENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRIL  570 (675)
Q Consensus       499 ~~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~  570 (675)
                      .........++|++.++||+|+||.||+|++      .+++.||||+++... ....+.+.+|+.++.++ +||||++++
T Consensus        13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~   92 (359)
T 3vhe_A           13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   92 (359)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence            3444455678999999999999999999974      246789999998643 23456799999999999 799999999


Q ss_pred             EEEEeCCe-EEEEEEecCCCCHHHHhcCCCC-------------------------------------------------
Q 005825          571 GCCIEQGE-KILILEYMPNKSLDVFLFDPTK-------------------------------------------------  600 (675)
Q Consensus       571 g~~~~~~~-~~lV~Ey~~~gsL~~~l~~~~~-------------------------------------------------  600 (675)
                      +++.+.+. .++||||+++|+|.+++.....                                                 
T Consensus        93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (359)
T 3vhe_A           93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS  172 (359)
T ss_dssp             EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred             eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence            99987654 8999999999999999965322                                                 


Q ss_pred             --------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          601 --------------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       601 --------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                                    ...+++..++.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+.+...
T Consensus       173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  246 (359)
T 3vhe_A          173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKD  246 (359)
T ss_dssp             -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred             cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence                          122889999999999999999999997   999999999999999999999999999977443

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.93  E-value=2e-25  Score=228.02  Aligned_cols=152  Identities=32%  Similarity=0.489  Sum_probs=137.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.+.||+|+||.||+|+..++..||||+++.. ....+++.+|+.++.+++||||+++++++.+.+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT-TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccC-CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            4689999999999999999999988889999999753 334578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ++++|.+++...  ...+++.++..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+++......
T Consensus        86 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           86 SNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             TTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred             CCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence            999999998532  345899999999999999999999987   9999999999999999999999999999875543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.93  E-value=3.1e-25  Score=229.89  Aligned_cols=150  Identities=28%  Similarity=0.451  Sum_probs=131.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|++.++||+|+||+||+|+.. +++.||||+++...  ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            57999999999999999999875 58999999997543  2334678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |++++ +.+++..  ....+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus        82 ~~~~~-l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  154 (292)
T 3o0g_A           82 FCDQD-LKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             CCSEE-HHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred             cCCCC-HHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence            99864 4444422  2356899999999999999999999997   999999999999999999999999999987543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.93  E-value=5.4e-26  Score=244.38  Aligned_cols=152  Identities=34%  Similarity=0.593  Sum_probs=128.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc----CCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|++.+.||+|+||.||+|+..    ++..||||+++.. .....++|.+|+.++++++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            368899999999999999999864    4678999999754 23345689999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++++|.+++...  ...+++.+++.|+.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus       124 v~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  198 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLE  198 (373)
T ss_dssp             EEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence            99999999999999642  346899999999999999999999987   9999999999999999999999999999875


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       199 ~~  200 (373)
T 2qol_A          199 DD  200 (373)
T ss_dssp             --
T ss_pred             cC
Confidence            54

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.93  E-value=2.5e-25  Score=233.07  Aligned_cols=151  Identities=31%  Similarity=0.434  Sum_probs=132.8

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..++|++.++||+|+||+||+|+..+++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            347899999999999999999999889999999997542  223467899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++ +|.+++..  ....+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.++.
T Consensus        99 e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  171 (311)
T 3niz_A           99 EFMEK-DLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI  171 (311)
T ss_dssp             ECCSE-EHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred             cCCCC-CHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence            99985 77777753  2345889999999999999999999987   99999999999999999999999999998753

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.93  E-value=9.5e-26  Score=239.00  Aligned_cols=158  Identities=31%  Similarity=0.503  Sum_probs=138.2

Q ss_pred             HHHhcCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEe
Q 005825          503 VAAATENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIE  575 (675)
Q Consensus       503 ~~~~~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~  575 (675)
                      +....++|++.+.||+|+||.||+|+..      +++.||||.++... ....+.|.+|+.++++++||||+++++++.+
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            3445689999999999999999999874      34789999998643 2345679999999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCC---------------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEec
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTK---------------------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR  634 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHr  634 (675)
                      .+..++||||+++++|.+++.....                     ...+++.+++.|+.||++||+|||+++   |+||
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~  198 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHR  198 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence            9999999999999999999864211                     256899999999999999999999997   9999


Q ss_pred             CCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          635 DLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       635 Dlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||||+|||+++++.+||+|||+++.+...
T Consensus       199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  227 (343)
T 1luf_A          199 DLATRNCLVGENMVVKIADFGLSRNIYSA  227 (343)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGG
T ss_pred             CCCcceEEECCCCeEEEeecCCCcccccC
Confidence            99999999999999999999999876443

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.93  E-value=1.8e-25  Score=241.13  Aligned_cols=155  Identities=32%  Similarity=0.514  Sum_probs=136.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc--------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL--------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIE  575 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~  575 (675)
                      ..++|.+.++||+|+||.||+|+..        .+..||||+++... ....+++.+|+++++++ +||||+++++++.+
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~  146 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ  146 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence            3478999999999999999999852        23579999997643 33457799999999999 89999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCC-------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEE
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTK-------------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVL  642 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NIL  642 (675)
                      .+..++||||+++|+|.+++.....             ...+++.+++.|+.||+.||+|||+++   |+||||||+|||
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl  223 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL  223 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEE
Confidence            9999999999999999999964321             245899999999999999999999987   999999999999


Q ss_pred             EcCCCCeEEeeeccceecCCC
Q 005825          643 LDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       643 l~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++++.+||+|||+|+.+...
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~  244 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHI  244 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCC
T ss_pred             EcCCCcEEEcccCcccccccc
Confidence            999999999999999987554

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.93  E-value=2.8e-25  Score=228.89  Aligned_cols=152  Identities=30%  Similarity=0.484  Sum_probs=135.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ..++|++.++||+|+||.||+++..++..||||+++.. ....+++.+|++++.+++||||+++++++.+.+..++||||
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  100 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY  100 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC-CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence            35789999999999999999999988889999999863 33457899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++...  ...+++..+..++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+++.+...
T Consensus       101 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  173 (283)
T 3gen_A          101 MANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD  173 (283)
T ss_dssp             CTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred             cCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence            9999999999542  345899999999999999999999987   999999999999999999999999999877543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.93  E-value=3e-25  Score=249.36  Aligned_cols=155  Identities=27%  Similarity=0.346  Sum_probs=138.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ..++|++.+.||+|+||.||+++.. +++.||||++.+.   .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            3568999999999999999999875 6899999999753   23456778999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++|+|..++.... ...+++..+..++.||+.||+|||+++   |+||||||+||||+.++++||+|||+|+.+.
T Consensus       262 VmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~  337 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVP  337 (576)
T ss_dssp             EECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecc
Confidence            999999999999986532 334899999999999999999999997   9999999999999999999999999999886


Q ss_pred             CCc
Q 005825          662 GDE  664 (675)
Q Consensus       662 ~~~  664 (675)
                      ..+
T Consensus       338 ~~~  340 (576)
T 2acx_A          338 EGQ  340 (576)
T ss_dssp             TTC
T ss_pred             cCc
Confidence            543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.93  E-value=4.2e-25  Score=226.84  Aligned_cols=153  Identities=24%  Similarity=0.407  Sum_probs=138.4

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ..++|++.++||+|+||.||+|+... +..||+|++........+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            34679999999999999999998754 77999999987666677899999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE---cCCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DFGla~~~~  661 (675)
                      |+++++|.+++..   ...+++..+..++.|++.||+|||+++   |+||||||+|||+   +.++.+||+|||+|+.+.
T Consensus        87 ~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~  160 (277)
T 3f3z_A           87 LCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK  160 (277)
T ss_dssp             CCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             ccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence            9999999998843   456899999999999999999999998   9999999999999   888999999999999875


Q ss_pred             CCc
Q 005825          662 GDE  664 (675)
Q Consensus       662 ~~~  664 (675)
                      ...
T Consensus       161 ~~~  163 (277)
T 3f3z_A          161 PGK  163 (277)
T ss_dssp             TTS
T ss_pred             Ccc
Confidence            443

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.93  E-value=6.8e-26  Score=235.11  Aligned_cols=152  Identities=34%  Similarity=0.563  Sum_probs=132.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-----cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-----LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~  579 (675)
                      .++|++.++||+|+||.||++++     .+++.||||++........+.+.+|+.++++++||||+++++++...  ...
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            46899999999999999999984     35889999999876666667899999999999999999999998654  458


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++...  ...+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.
T Consensus        89 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             EEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccccc
Confidence            9999999999999999542  335899999999999999999999987   99999999999999999999999999998


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +...
T Consensus       164 ~~~~  167 (295)
T 3ugc_A          164 LPQD  167 (295)
T ss_dssp             ----
T ss_pred             ccCC
Confidence            7543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.93  E-value=1.9e-25  Score=233.53  Aligned_cols=156  Identities=33%  Similarity=0.533  Sum_probs=136.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE------cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      ..++|.+.+.||+|+||.||+|+.      .+++.||||.++... ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  100 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP  100 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence            357899999999999999999976      235789999997543 3445789999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCC---------------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCC
Q 005825          579 KILILEYMPNKSLDVFLFDPTK---------------------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLK  637 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk  637 (675)
                      .++||||+++++|.+++.....                     ...+++.+++.++.||+.||+|||+++   |+|||||
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik  177 (314)
T 2ivs_A          101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA  177 (314)
T ss_dssp             CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred             eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence            9999999999999999964321                     234889999999999999999999987   9999999


Q ss_pred             CCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          638 ASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       638 p~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+|||+++++.+||+|||+++.+....
T Consensus       178 p~NIli~~~~~~kl~Dfg~~~~~~~~~  204 (314)
T 2ivs_A          178 ARNILVAEGRKMKISDFGLSRDVYEED  204 (314)
T ss_dssp             GGGEEEETTTEEEECCCTTCEECTTTS
T ss_pred             hheEEEcCCCCEEEccccccccccccc
Confidence            999999999999999999999875543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.93  E-value=3.4e-25  Score=245.03  Aligned_cols=152  Identities=30%  Similarity=0.497  Sum_probs=137.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|.+.+.||+|+||.||+|+.. +|+.||||++...   .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            368999999999999999999875 6999999999753   223456899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++.   ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus        95 ~E~~~gg~L~~~l~---~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~  168 (476)
T 2y94_A           95 MEYVSGGELFDYIC---KNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  168 (476)
T ss_dssp             EECCSSEEHHHHTT---SSSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred             EeCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence            99999999999994   3456899999999999999999999987   99999999999999999999999999998765


Q ss_pred             Cc
Q 005825          663 DE  664 (675)
Q Consensus       663 ~~  664 (675)
                      .+
T Consensus       169 ~~  170 (476)
T 2y94_A          169 GE  170 (476)
T ss_dssp             TC
T ss_pred             cc
Confidence            43

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.93  E-value=4.8e-25  Score=237.96  Aligned_cols=153  Identities=25%  Similarity=0.372  Sum_probs=136.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .+.|++.++||+|+||.||+|+.. +++.||+|.+..........+.+|+.++++++||||+++++++.+.+..++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            468999999999999999999875 5889999999865555566899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC--CCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR--DMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~  663 (675)
                      +++++|.+++..  ....+++..+..++.||+.||+|||+++   |+||||||+|||++.  .+.+||+|||+|+.+..+
T Consensus       130 ~~gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          130 LSGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             CCCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             CCCCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence            999999999853  2345899999999999999999999987   999999999999974  578999999999988654


Q ss_pred             c
Q 005825          664 E  664 (675)
Q Consensus       664 ~  664 (675)
                      .
T Consensus       205 ~  205 (387)
T 1kob_A          205 E  205 (387)
T ss_dssp             S
T ss_pred             c
Confidence            3

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.93  E-value=3.4e-25  Score=237.16  Aligned_cols=152  Identities=26%  Similarity=0.411  Sum_probs=134.6

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ..++|++.+.||+|+||.||+|+.. +++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv  106 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV  106 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            3468999999999999999999874 58999999997542  23456789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC---CCeEEeeecccee
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD---MNPKISDFGLARM  659 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~---~~~kl~DFGla~~  659 (675)
                      |||+++|+|.+++..   ...+++.++..++.||+.||+|||+++   |+||||||+|||++.+   +.+||+|||+|+.
T Consensus       107 ~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~  180 (362)
T 2bdw_A          107 FDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE  180 (362)
T ss_dssp             ECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred             EecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence            999999999999843   456899999999999999999999997   9999999999999865   4599999999998


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +...
T Consensus       181 ~~~~  184 (362)
T 2bdw_A          181 VNDS  184 (362)
T ss_dssp             CTTC
T ss_pred             ecCC
Confidence            7644

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.92  E-value=1.4e-25  Score=240.90  Aligned_cols=149  Identities=26%  Similarity=0.315  Sum_probs=124.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHH-HHhcCCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLL-IAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~i-l~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|++.+.||+|+||+||+++.. +++.||||++++..   ....+.+..|..+ ++.++||||+++++++.+.+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            468999999999999999999875 48899999997643   2234556777776 577899999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++|+|..++.   +...+++.....++.||+.||+|||+++   |+||||||+|||++.++++||+|||+|+...
T Consensus       117 v~E~~~gg~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~  190 (373)
T 2r5t_A          117 VLDYINGGELFYHLQ---RERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENI  190 (373)
T ss_dssp             EEECCCSCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred             EEeCCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence            999999999999984   3446888899999999999999999988   9999999999999999999999999998753

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.92  E-value=1.9e-25  Score=249.20  Aligned_cols=154  Identities=31%  Similarity=0.526  Sum_probs=138.3

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ...+|++.++||+|+||.||+|++.. +..||||.++.. ....++|.+|+.++++++||||++++++|.+.+..++|||
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E  296 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE  296 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence            34678999999999999999999865 889999999864 3457889999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+++|+|.+++... ....+++..++.|+.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+.+..+.
T Consensus       297 ~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  372 (495)
T 1opk_A          297 FMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT  372 (495)
T ss_dssp             CCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred             ccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence            99999999999642 2345889999999999999999999987   9999999999999999999999999999875543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.92  E-value=2.1e-25  Score=236.10  Aligned_cols=151  Identities=26%  Similarity=0.448  Sum_probs=134.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|.+.+.||+|+||.||+|+. .+++.||||++...   .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            47899999999999999999987 56899999998743   223456799999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+ +|+|.+++..   ...+++.++..++.||+.||.|||+++   |+||||||+|||+++++.+||+|||+|+.+..
T Consensus        88 ~E~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~  160 (336)
T 3h4j_B           88 IEYA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTD  160 (336)
T ss_dssp             ECCC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred             EECC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence            9999 7888888843   356899999999999999999999998   99999999999999999999999999998754


Q ss_pred             Cc
Q 005825          663 DE  664 (675)
Q Consensus       663 ~~  664 (675)
                      ..
T Consensus       161 ~~  162 (336)
T 3h4j_B          161 GN  162 (336)
T ss_dssp             SB
T ss_pred             Cc
Confidence            43

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.92  E-value=7.5e-26  Score=249.26  Aligned_cols=150  Identities=25%  Similarity=0.301  Sum_probs=125.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.++||+|+||.||+++.. +++.||||+++..   .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            467999999999999999999864 5899999999753   334456788999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHh-cCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH-YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |||+++++|..++.   ....+++..+..++.||+.||+|||+ .+   |+||||||+||||+.++.+||+|||+|+...
T Consensus       227 ~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  300 (446)
T 4ejn_A          227 MEYANGGELFFHLS---RERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGI  300 (446)
T ss_dssp             ECCCSSCBHHHHHH---HHSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred             EeeCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence            99999999999984   34568999999999999999999998 66   9999999999999999999999999998754


Q ss_pred             C
Q 005825          662 G  662 (675)
Q Consensus       662 ~  662 (675)
                      .
T Consensus       301 ~  301 (446)
T 4ejn_A          301 K  301 (446)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.92  E-value=6e-25  Score=234.24  Aligned_cols=155  Identities=25%  Similarity=0.373  Sum_probs=134.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc-----CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ-----SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~-----~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .+.|++.+.||+|+||.||+|+.. +++.||||++...     .....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            357999999999999999999874 5899999998632     1234678999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC---eEEeeecc
Q 005825          581 LILEYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN---PKISDFGL  656 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DFGl  656 (675)
                      +||||+++++|.+++.... ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            9999999999988774321 2335889999999999999999999987   999999999999987654   99999999


Q ss_pred             ceecCCCc
Q 005825          657 ARMFGGDE  664 (675)
Q Consensus       657 a~~~~~~~  664 (675)
                      |+.+....
T Consensus       180 a~~~~~~~  187 (351)
T 3c0i_A          180 AIQLGESG  187 (351)
T ss_dssp             CEECCTTS
T ss_pred             eeEecCCC
Confidence            99886543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=2.7e-25  Score=235.75  Aligned_cols=155  Identities=33%  Similarity=0.493  Sum_probs=133.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCc-CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQG  577 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~  577 (675)
                      ..++|.+.+.||+|+||.||+|+..      +++.||||.++.. .....+.+.+|+.++.++ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            4578999999999999999999862      3568999999754 234557899999999999 8999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCC--------------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCC
Q 005825          578 EKILILEYMPNKSLDVFLFDPTK--------------------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLK  637 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk  637 (675)
                      ..++||||+++|+|.+++.....                    ...+++..++.++.||+.||+|||+++   |+|||||
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik  199 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA  199 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence            99999999999999999965322                    134789999999999999999999987   9999999


Q ss_pred             CCCEEEcCCCCeEEeeeccceecCCC
Q 005825          638 ASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       638 p~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |+|||++.++.+||+|||+++.+...
T Consensus       200 p~NIll~~~~~~kL~Dfg~~~~~~~~  225 (344)
T 1rjb_A          200 ARNVLVTHGKVVKICDFGLARDIMSD  225 (344)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGC
T ss_pred             hhhEEEcCCCcEEeCCCccCcccccC
Confidence            99999999999999999999877544

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.92  E-value=3.5e-25  Score=236.96  Aligned_cols=147  Identities=27%  Similarity=0.350  Sum_probs=130.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .++|++.++||+|+||.||+++.. +++.||||++... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG-AAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESS-TTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecC-ccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            478999999999999999999875 6899999999753 33446789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC--eEEeeeccceec
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN--PKISDFGLARMF  660 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~--~kl~DFGla~~~  660 (675)
                      +++|+|.+++..   ...+++..+..++.|++.||+|||+++   |+||||||+|||++.++.  +||+|||+|+..
T Consensus        98 ~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~  168 (361)
T 3uc3_A           98 ASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSS  168 (361)
T ss_dssp             CCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred             CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence            999999999843   346899999999999999999999988   999999999999987765  999999999854

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.92  E-value=2.5e-25  Score=230.21  Aligned_cols=149  Identities=30%  Similarity=0.458  Sum_probs=133.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.++||+|+||.||+|+..+++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            5799999999999999999998789999999997532  23357789999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++ +|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus        82 ~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  152 (288)
T 1ob3_A           82 LDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGI  152 (288)
T ss_dssp             CSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred             cCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCc
Confidence            986 898888532  345889999999999999999999987   99999999999999999999999999987653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.92  E-value=2e-25  Score=246.37  Aligned_cols=152  Identities=32%  Similarity=0.486  Sum_probs=136.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ..++|++.++||+|+||.||+|+..++..||||+++.. ....++|.+|+.++++++||||+++++++. .+..++||||
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~  263 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF  263 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred             chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC-CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence            45789999999999999999999988899999999864 346788999999999999999999999986 5678999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++|+|.+++... ....+++..++.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+.+...
T Consensus       264 ~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~  337 (454)
T 1qcf_A          264 MAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDN  337 (454)
T ss_dssp             CTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred             cCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence            9999999999542 2235788999999999999999999987   999999999999999999999999999987543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.92  E-value=8.9e-26  Score=242.18  Aligned_cols=152  Identities=35%  Similarity=0.523  Sum_probs=132.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .++|++.++||+|+||.||+|+..      +++.||||+++.. ......++.+|+.++++++||||+++++++.+....
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            367899999999999999999853      4678999999754 334456799999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCC----CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC---CeEEe
Q 005825          580 ILILEYMPNKSLDVFLFDPT----KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM---NPKIS  652 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~---~~kl~  652 (675)
                      ++||||+++|+|.+++....    ....+++.+++.++.||+.||+|||+++   |+||||||+|||++.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence            99999999999999996421    2245899999999999999999999998   99999999999999554   59999


Q ss_pred             eeccceecC
Q 005825          653 DFGLARMFG  661 (675)
Q Consensus       653 DFGla~~~~  661 (675)
                      |||+|+.+.
T Consensus       227 DFG~a~~~~  235 (367)
T 3l9p_A          227 DFGMARDIY  235 (367)
T ss_dssp             CCHHHHHHH
T ss_pred             CCccccccc
Confidence            999998663

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.92  E-value=6e-25  Score=246.14  Aligned_cols=155  Identities=29%  Similarity=0.387  Sum_probs=138.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|.+.+.||+|+||+||+++.. +++.||||++.+.   .....+.+..|+.++++++||||+++++++.+.+..++|
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  263 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV  263 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence            468999999999999999999875 5899999999753   234567899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          583 LEYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |||+++|+|..++.... ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++++||+|||+|+.+.
T Consensus       264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            99999999999986532 2446899999999999999999999987   9999999999999999999999999999886


Q ss_pred             CCc
Q 005825          662 GDE  664 (675)
Q Consensus       662 ~~~  664 (675)
                      ...
T Consensus       341 ~~~  343 (543)
T 3c4z_A          341 AGQ  343 (543)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            544

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.92  E-value=9e-26  Score=236.29  Aligned_cols=151  Identities=25%  Similarity=0.381  Sum_probs=129.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC----e
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG----E  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~----~  578 (675)
                      .++|++.++||+|+||.||+++. .+++.||||+++....   ...+.+.+|+.++++++||||+++++++....    .
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            47899999999999999999986 5689999999976432   23457899999999999999999999987654    3


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++||||+++++|.+++..   ...+++.++..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+
T Consensus        91 ~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~  164 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR  164 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC-
T ss_pred             cEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcc
Confidence            4999999999999999943   346899999999999999999999987   9999999999999999999999999998


Q ss_pred             ecCCC
Q 005825          659 MFGGD  663 (675)
Q Consensus       659 ~~~~~  663 (675)
                      .+...
T Consensus       165 ~~~~~  169 (311)
T 3ork_A          165 AIADS  169 (311)
T ss_dssp             -----
T ss_pred             ccccc
Confidence            87543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.92  E-value=6.2e-25  Score=232.27  Aligned_cols=155  Identities=30%  Similarity=0.530  Sum_probs=135.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc--------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL--------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIE  575 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~  575 (675)
                      ..++|++.+.||+|+||.||+|+..        +++.||||+++... ....+.+.+|+.+++++ +||||+++++++.+
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            3478999999999999999999863        46789999998543 23456799999999999 89999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCC-------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEE
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTK-------------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVL  642 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NIL  642 (675)
                      .+..++||||+++++|.+++.....             ...+++.+++.++.||+.||+|||+++   |+||||||+|||
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl  189 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL  189 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence            9999999999999999999965321             234889999999999999999999987   999999999999


Q ss_pred             EcCCCCeEEeeeccceecCCC
Q 005825          643 LDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       643 l~~~~~~kl~DFGla~~~~~~  663 (675)
                      ++.++.+||+|||+++.+...
T Consensus       190 l~~~~~~kL~Dfg~~~~~~~~  210 (334)
T 2pvf_A          190 VTENNVMKIADFGLARDINNI  210 (334)
T ss_dssp             ECTTCCEEECCCTTCEECTTT
T ss_pred             EcCCCCEEEcccccccccccc
Confidence            999999999999999987654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.92  E-value=4.1e-25  Score=242.65  Aligned_cols=153  Identities=26%  Similarity=0.420  Sum_probs=133.8

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ..++|++.++||+|+||.||++.. .+++.+|+|++....  ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            457899999999999999999976 468999999987543  23456789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc---CCCCeEEeeecccee
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARM  659 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DFGla~~  659 (675)
                      |||+++|+|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++   +++.+||+|||+|+.
T Consensus        89 ~E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~  162 (444)
T 3soa_A           89 FDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIE  162 (444)
T ss_dssp             ECCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred             EEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence            999999999998843   356899999999999999999999998   99999999999998   568899999999988


Q ss_pred             cCCCc
Q 005825          660 FGGDE  664 (675)
Q Consensus       660 ~~~~~  664 (675)
                      +....
T Consensus       163 ~~~~~  167 (444)
T 3soa_A          163 VEGEQ  167 (444)
T ss_dssp             CCTTC
T ss_pred             ecCCC
Confidence            76543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.92  E-value=4.9e-25  Score=236.91  Aligned_cols=148  Identities=30%  Similarity=0.433  Sum_probs=127.2

Q ss_pred             eeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCCCC
Q 005825          512 MECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKS  590 (675)
Q Consensus       512 ~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~gs  590 (675)
                      ..+.||+|+||.||+|+.. +++.||||+++.......+++.+|+.++++++||||+++++++.+.+..++||||+++++
T Consensus        93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~  172 (373)
T 2x4f_A           93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE  172 (373)
T ss_dssp             EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred             cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence            3578999999999999874 589999999987555566789999999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE--cCCCCeEEeeeccceecCCCc
Q 005825          591 LDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL--DRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       591 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl--~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |.+++..  ....+++..+..++.||+.||+|||+++   |+||||||+|||+  +.++.+||+|||+|+.+...+
T Consensus       173 L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~  243 (373)
T 2x4f_A          173 LFDRIID--ESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE  243 (373)
T ss_dssp             EHHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred             HHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence            9988853  2345889999999999999999999988   9999999999999  567899999999999886543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.92  E-value=6.8e-25  Score=231.60  Aligned_cols=150  Identities=25%  Similarity=0.308  Sum_probs=133.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||.||+|+. .+++.||||.+....  ..+.+..|+.+++++ +||||+++++++...+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            46899999999999999999986 568999999987532  335688999999999 99999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC-----eEEeeecccee
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN-----PKISDFGLARM  659 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~-----~kl~DFGla~~  659 (675)
                      |+ +++|.+++...  ...+++..++.|+.||+.||+|||+++   |+||||||+|||++.++.     +||+|||+|+.
T Consensus        86 ~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~  159 (330)
T 2izr_A           86 LL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE  159 (330)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred             eC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence            99 99999998542  346899999999999999999999997   999999999999998887     99999999998


Q ss_pred             cCCCc
Q 005825          660 FGGDE  664 (675)
Q Consensus       660 ~~~~~  664 (675)
                      +....
T Consensus       160 ~~~~~  164 (330)
T 2izr_A          160 YIDPE  164 (330)
T ss_dssp             SBCTT
T ss_pred             eecCC
Confidence            75543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.92  E-value=7.1e-25  Score=241.68  Aligned_cols=150  Identities=31%  Similarity=0.515  Sum_probs=133.3

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC-eEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG-EKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~-~~~lV~E  584 (675)
                      ..++|++.++||+|+||.||+|+.. ++.||||.++...  ..+.|.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            4578999999999999999999884 7899999998643  5578999999999999999999999988766 7999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |+++|+|.+++... ....+++..++.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+....
T Consensus       268 ~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  341 (450)
T 1k9a_A          268 YMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  341 (450)
T ss_dssp             CCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             ecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence            99999999999642 2234789999999999999999999997   99999999999999999999999999997643

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.92  E-value=3.8e-25  Score=233.11  Aligned_cols=152  Identities=33%  Similarity=0.524  Sum_probs=131.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcE----EEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEE----VAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~----vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .++|++.++||+|+||.||+|+.. +++.    ||+|.+.... ....+++.+|+.++++++||||+++++++. .+..+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   90 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ   90 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence            368999999999999999999864 3443    8888876432 344567889999999999999999999986 56789


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||+++|+|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+
T Consensus        91 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  165 (325)
T 3kex_A           91 LVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL  165 (325)
T ss_dssp             EEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred             EEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCccccc
Confidence            999999999999999643  346888999999999999999999997   999999999999999999999999999988


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ....
T Consensus       166 ~~~~  169 (325)
T 3kex_A          166 PPDD  169 (325)
T ss_dssp             CCCT
T ss_pred             Cccc
Confidence            6554

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.92  E-value=6.6e-25  Score=237.85  Aligned_cols=155  Identities=28%  Similarity=0.438  Sum_probs=136.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC--eEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG--EKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~--~~~lV  582 (675)
                      .++|++.++||+|+||.||+|+... ++.||||+++... ....+.+.+|++++++++||||+++++++.+.+  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            3679999999999999999998754 8999999997543 345678889999999999999999999998765  78999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE----cCCCCeEEeeeccce
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL----DRDMNPKISDFGLAR  658 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl----~~~~~~kl~DFGla~  658 (675)
                      |||+++++|.+++........+++..+..++.||+.||+|||+++   |+||||||+|||+    +.++.+||+|||+|+
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~  164 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR  164 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence            999999999999965444445899999999999999999999997   9999999999999    778889999999999


Q ss_pred             ecCCCc
Q 005825          659 MFGGDE  664 (675)
Q Consensus       659 ~~~~~~  664 (675)
                      .+....
T Consensus       165 ~~~~~~  170 (396)
T 4eut_A          165 ELEDDE  170 (396)
T ss_dssp             ECCCGG
T ss_pred             EccCCC
Confidence            886544

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.92  E-value=6.1e-25  Score=234.03  Aligned_cols=150  Identities=26%  Similarity=0.408  Sum_probs=122.4

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ..+.|++.++||+|+||.||+|+.. +++.||||+++...  ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            4578999999999999999999886 47899999997532  34678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DFGla~~~~  661 (675)
                      |+++++|.+++..   ...+++.++..++.||+.||+|||+++   |+||||||+|||++.   ++.+||+|||+++...
T Consensus       129 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          129 LVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             CCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred             eCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence            9999999999843   456899999999999999999999987   999999999999975   8899999999999875


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       203 ~~  204 (349)
T 2w4o_A          203 HQ  204 (349)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.92  E-value=2.7e-25  Score=233.63  Aligned_cols=156  Identities=31%  Similarity=0.526  Sum_probs=122.5

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEcC-C---cEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLLN-G---EEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~~-g---~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      ...++|++.+.||+|+||.||+|+... +   ..||||.++..  .....+++.+|+.++++++||||+++++++.....
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            345789999999999999999998654 2   27999999754  33456789999999999999999999999987765


Q ss_pred             E------EEEEEecCCCCHHHHhcCCC---CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCe
Q 005825          579 K------ILILEYMPNKSLDVFLFDPT---KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP  649 (675)
Q Consensus       579 ~------~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~  649 (675)
                      .      ++||||+++++|.+++....   ....+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~  176 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTV  176 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCE
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCE
Confidence            5      99999999999999985321   1225899999999999999999999997   9999999999999999999


Q ss_pred             EEeeeccceecCCC
Q 005825          650 KISDFGLARMFGGD  663 (675)
Q Consensus       650 kl~DFGla~~~~~~  663 (675)
                      ||+|||+|+.+...
T Consensus       177 kl~Dfg~a~~~~~~  190 (323)
T 3qup_A          177 CVADFGLSRKIYSG  190 (323)
T ss_dssp             EECCCCC-------
T ss_pred             EEeecccccccccc
Confidence            99999999877543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.92  E-value=4.3e-25  Score=230.71  Aligned_cols=156  Identities=32%  Similarity=0.462  Sum_probs=136.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE------cCCcEEEEEEecCcCc-cCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQG  577 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~  577 (675)
                      ..++|++.+.||+|+||.||+|+.      .+++.||||+++.... ...+.+.+|+.++.++ +||||+++++++.+.+
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~  100 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence            346899999999999999999985      2467899999985432 3457899999999999 8999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCC---------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEE
Q 005825          578 EKILILEYMPNKSLDVFLFDPTK---------------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVL  642 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NIL  642 (675)
                      ..++||||+++|+|.+++.....               ...+++..++.++.||+.||+|||+++   |+||||||+|||
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil  177 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNIL  177 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEE
Confidence            99999999999999999864321               225899999999999999999999987   999999999999


Q ss_pred             EcCCCCeEEeeeccceecCCCc
Q 005825          643 LDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       643 l~~~~~~kl~DFGla~~~~~~~  664 (675)
                      +++++.+||+|||+++.+....
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~  199 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDS  199 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCT
T ss_pred             EcCCCCEEEccccccccccccc
Confidence            9999999999999999886543

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.92  E-value=8.3e-25  Score=224.24  Aligned_cols=150  Identities=33%  Similarity=0.418  Sum_probs=135.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            468999999999999999999875 68999999987533 3345789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |+++++|.+++.   ....+++..+..++.|++.||+|||+++   |+||||||+||+++.++.+||+|||+++.+..
T Consensus        86 ~~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  157 (276)
T 2yex_A           86 YCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (276)
T ss_dssp             CCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             ecCCCcHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence            999999999884   3346889999999999999999999987   99999999999999999999999999987643

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=2.6e-25  Score=237.43  Aligned_cols=150  Identities=29%  Similarity=0.376  Sum_probs=134.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEE----cCCcEEEEEEecCcC----ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL----LNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGE  578 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~  578 (675)
                      ++|++.++||+|+||.||+++.    .+++.||||+++...    ....+.+..|+.++.++ +||||+++++++...+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            6899999999999999999987    368999999997532    23456788899999999 69999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++||||+++++|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+
T Consensus       134 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             EEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence            9999999999999999943   346889999999999999999999987   9999999999999999999999999999


Q ss_pred             ecCCC
Q 005825          659 MFGGD  663 (675)
Q Consensus       659 ~~~~~  663 (675)
                      .+...
T Consensus       208 ~~~~~  212 (355)
T 1vzo_A          208 EFVAD  212 (355)
T ss_dssp             ECCGG
T ss_pred             ecccC
Confidence            87543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.92  E-value=5.3e-25  Score=230.50  Aligned_cols=150  Identities=28%  Similarity=0.286  Sum_probs=128.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||+||+|+.. +++.||||++.....  ....++..|+..+.++ +||||+++++++.+.+..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            67999999999999999999886 689999999875322  2334555666666555 8999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+ +++|.+++...  ...+++..+..|+.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus       137 e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~  210 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA  210 (311)
T ss_dssp             ECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred             ecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence            999 77898888532  346899999999999999999999987   999999999999999999999999999887544

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.92  E-value=6.4e-25  Score=240.74  Aligned_cols=151  Identities=26%  Similarity=0.439  Sum_probs=132.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC-----C
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ-----G  577 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~-----~  577 (675)
                      ..++|++.++||+|+||.||+|+.. +++.||||+++..  .....+++.+|+.++++++||||+++++++...     .
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            3578999999999999999999874 5889999999753  223456899999999999999999999999776     5


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      ..++||||++ ++|.+++..   ...+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|
T Consensus       104 ~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla  176 (432)
T 3n9x_A          104 ELYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLA  176 (432)
T ss_dssp             CEEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCc
Confidence            7899999987 599999843   456899999999999999999999998   999999999999999999999999999


Q ss_pred             eecCCC
Q 005825          658 RMFGGD  663 (675)
Q Consensus       658 ~~~~~~  663 (675)
                      +.+...
T Consensus       177 ~~~~~~  182 (432)
T 3n9x_A          177 RTINSE  182 (432)
T ss_dssp             EEC---
T ss_pred             cccccc
Confidence            987544

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.92  E-value=4.5e-25  Score=234.40  Aligned_cols=151  Identities=25%  Similarity=0.373  Sum_probs=131.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCC--CceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQH--RNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H--~nIv~l~g~~~~~~~~~lV  582 (675)
                      .+.|++.++||+|+||.||++...+++.||||++...  .....+.+.+|+.++.+++|  |||+++++++.+.+..++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            4679999999999999999999888999999998753  23345789999999999976  9999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      || +.+++|.+++..   ...+++.++..++.||+.||+|||+++   |+||||||+|||++ ++.+||+|||+|+.+..
T Consensus        88 ~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             EC-CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred             Ee-CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence            99 568899999953   456889999999999999999999997   99999999999997 57899999999998865


Q ss_pred             Ccc
Q 005825          663 DEL  665 (675)
Q Consensus       663 ~~~  665 (675)
                      +..
T Consensus       160 ~~~  162 (343)
T 3dbq_A          160 DTT  162 (343)
T ss_dssp             ---
T ss_pred             ccc
Confidence            543

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.92  E-value=3.5e-25  Score=233.58  Aligned_cols=152  Identities=36%  Similarity=0.580  Sum_probs=128.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCc----EEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGE----EVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~----~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .++|++.++||+|+||.||+|+.. +++    +||+|.++.. .....++|.+|+.++++++||||+++++++.+.. .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            367999999999999999999864 344    4688888643 3456678999999999999999999999998754 78


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +|+||+++|+|.+++...  ...+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+
T Consensus        93 ~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~  167 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred             EEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEc
Confidence            999999999999999642  345899999999999999999999987   999999999999999999999999999988


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ....
T Consensus       168 ~~~~  171 (327)
T 3poz_A          168 GAEE  171 (327)
T ss_dssp             TTTC
T ss_pred             cCCc
Confidence            6544

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.92  E-value=1.3e-24  Score=225.71  Aligned_cols=146  Identities=32%  Similarity=0.452  Sum_probs=127.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHh--cCCCceeeEEEEEEeC----CeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAK--LQHRNLVRILGCCIEQ----GEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~--l~H~nIv~l~g~~~~~----~~~~  580 (675)
                      .++|++.++||+|+||.||+|+. +++.||||++...   ..+.+..|.+++..  ++||||+++++++...    ...+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            46899999999999999999988 6899999999643   34566677777766  7999999999997653    4589


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHH--------hcCCCceEecCCCCCCEEEcCCCCeEEe
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH--------HYSRFRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                      +||||+++|+|.+++.    ...+++..++.++.||+.||+|||        +.+   |+||||||+|||++.++.+||+
T Consensus        83 lv~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~  155 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIA  155 (301)
T ss_dssp             EEECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEEC
T ss_pred             EehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEe
Confidence            9999999999999993    245899999999999999999999        655   9999999999999999999999


Q ss_pred             eeccceecCCC
Q 005825          653 DFGLARMFGGD  663 (675)
Q Consensus       653 DFGla~~~~~~  663 (675)
                      |||+|+.....
T Consensus       156 Dfg~a~~~~~~  166 (301)
T 3q4u_A          156 DLGLAVMHSQS  166 (301)
T ss_dssp             CCTTCEEEETT
T ss_pred             eCCCeeecccc
Confidence            99999887544

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.92  E-value=1.4e-24  Score=226.95  Aligned_cols=150  Identities=28%  Similarity=0.398  Sum_probs=133.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|++.++||+|+||.||+|+.. +++.||||++.....  ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            68999999999999999999875 489999999865432  234678899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |+++++|..++..   ...+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus        83 ~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  155 (311)
T 4agu_A           83 YCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGP  155 (311)
T ss_dssp             CCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             eCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence            9999999998843   345889999999999999999999997   999999999999999999999999999987543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.92  E-value=1.6e-24  Score=227.58  Aligned_cols=152  Identities=32%  Similarity=0.467  Sum_probs=120.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            468899999999999999999864 58999999997543 3345788999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCC---CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDP---TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |++ ++|.+++...   .....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 5998888532   12245889999999999999999999987   9999999999999999999999999999875


Q ss_pred             C
Q 005825          662 G  662 (675)
Q Consensus       662 ~  662 (675)
                      .
T Consensus       160 ~  160 (317)
T 2pmi_A          160 I  160 (317)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.92  E-value=5.6e-25  Score=232.95  Aligned_cols=153  Identities=25%  Similarity=0.378  Sum_probs=135.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc--------cCHHHHHHHHHHHHhcCCCceeeEEEEEEeC
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG--------QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ  576 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~  576 (675)
                      ..++|++.++||+|+||.||+|+. .+++.||||+++....        ...+.+.+|+.++++++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            457899999999999999999986 4689999999975421        1345688899999999999999999999999


Q ss_pred             CeEEEEEEecCCC-CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          577 GEKILILEYMPNK-SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       577 ~~~~lV~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      +..++||||+.+| +|.+++..   ...+++..+..|+.||+.||+|||+++   |+||||||+|||+++++.+||+|||
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg  175 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFG  175 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCT
T ss_pred             CEEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecc
Confidence            9999999999777 99999843   346899999999999999999999997   9999999999999999999999999


Q ss_pred             cceecCCCc
Q 005825          656 LARMFGGDE  664 (675)
Q Consensus       656 la~~~~~~~  664 (675)
                      +++.+....
T Consensus       176 ~a~~~~~~~  184 (335)
T 3dls_A          176 SAAYLERGK  184 (335)
T ss_dssp             TCEECCTTC
T ss_pred             cceECCCCC
Confidence            999876543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.92  E-value=4e-25  Score=244.23  Aligned_cols=149  Identities=24%  Similarity=0.419  Sum_probs=122.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC-----Ce
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ-----GE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~-----~~  578 (675)
                      .++|++.++||+|+||.||+|+.. +++.||||++...  .....+++.+|+.++++++||||+++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            478999999999999999999864 6899999999753  223456799999999999999999999999543     56


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++||||+ +++|.+++..   ...+++..+..++.||+.||+|||+.+   |+||||||+||||+.++.+||+|||+|+
T Consensus       132 ~~lv~e~~-~~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~  204 (458)
T 3rp9_A          132 LYVVLEIA-DSDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR  204 (458)
T ss_dssp             EEEEECCC-SEEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             EEEEEecc-ccchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccch
Confidence            89999998 5789988843   456899999999999999999999997   9999999999999999999999999999


Q ss_pred             ecCC
Q 005825          659 MFGG  662 (675)
Q Consensus       659 ~~~~  662 (675)
                      .+..
T Consensus       205 ~~~~  208 (458)
T 3rp9_A          205 TVDY  208 (458)
T ss_dssp             CTTS
T ss_pred             hccC
Confidence            8754

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.92  E-value=3.4e-25  Score=234.51  Aligned_cols=148  Identities=22%  Similarity=0.317  Sum_probs=126.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcC--------ccCHHHHHHHHHHHHhcC---------CCceeeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS--------GQGLEEFKNEMLLIAKLQ---------HRNLVRI  569 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~f~~E~~il~~l~---------H~nIv~l  569 (675)
                      .++|++.++||+|+||+||+|+. +++.||||+++...        ....+.+.+|+.++++++         ||||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            46789999999999999999988 78999999997542        233478999999999886         8888888


Q ss_pred             EEEEE------------------------------eCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHH
Q 005825          570 LGCCI------------------------------EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQG  619 (675)
Q Consensus       570 ~g~~~------------------------------~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~  619 (675)
                      .+.+.                              +.+..++||||+++|++.+.+..    ..+++..+..|+.||+.|
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence            88754                              26789999999999976666522    457899999999999999


Q ss_pred             HHHHH-hcCCCceEecCCCCCCEEEcCCC--------------------CeEEeeeccceecCC
Q 005825          620 LLYLH-HYSRFRIIHRDLKASNVLLDRDM--------------------NPKISDFGLARMFGG  662 (675)
Q Consensus       620 L~yLH-~~~~~~iiHrDlkp~NILl~~~~--------------------~~kl~DFGla~~~~~  662 (675)
                      |+||| +++   |+||||||+||||+.++                    .+||+|||+|+.+..
T Consensus       174 L~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~  234 (336)
T 2vuw_A          174 LAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD  234 (336)
T ss_dssp             HHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET
T ss_pred             HHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC
Confidence            99999 887   99999999999999887                    899999999998754

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.92  E-value=8.5e-25  Score=252.34  Aligned_cols=162  Identities=28%  Similarity=0.342  Sum_probs=139.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~  580 (675)
                      ..++|++.++||+|+||+||+|+.. +++.||||++++.   .....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            4578999999999999999999875 5889999999753   234567788999999987 7999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |||||+++|+|..++..   ...+++..+..|+.||+.||+|||+++   ||||||||+||||++++++||+|||+|+..
T Consensus       419 lV~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~  492 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN  492 (674)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred             EEEeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecc
Confidence            99999999999999943   346899999999999999999999997   999999999999999999999999999975


Q ss_pred             CCCcccCCCCceecC
Q 005825          661 GGDELQGNTKRIVGT  675 (675)
Q Consensus       661 ~~~~~~~~~~~~~GT  675 (675)
                      ..+..  .+...+||
T Consensus       493 ~~~~~--~~~~~~GT  505 (674)
T 3pfq_A          493 IWDGV--TTKTFCGT  505 (674)
T ss_dssp             CCTTC--CBCCCCSC
T ss_pred             ccCCc--ccccccCC
Confidence            43332  23335555

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.92  E-value=1.6e-24  Score=227.89  Aligned_cols=151  Identities=29%  Similarity=0.411  Sum_probs=135.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc------cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG------QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .+.|++.+.||+|+||.||+++.. +++.||||.++....      ...+++.+|+.++++++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            467999999999999999999875 589999999875422      1367899999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC----CeEEeeec
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM----NPKISDFG  655 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DFG  655 (675)
                      ++||||+++++|.+++..   ...+++..+..++.|++.||+|||+++   |+||||||+|||++.++    .+||+|||
T Consensus        91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg  164 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG  164 (321)
T ss_dssp             EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred             EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCc
Confidence            999999999999999953   346889999999999999999999987   99999999999999888    79999999


Q ss_pred             cceecCCC
Q 005825          656 LARMFGGD  663 (675)
Q Consensus       656 la~~~~~~  663 (675)
                      +++.+...
T Consensus       165 ~~~~~~~~  172 (321)
T 2a2a_A          165 LAHEIEDG  172 (321)
T ss_dssp             TCEECCTT
T ss_pred             cceecCcc
Confidence            99987554

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.92  E-value=1e-24  Score=226.78  Aligned_cols=151  Identities=34%  Similarity=0.565  Sum_probs=132.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-----cCCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-----LNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEK  579 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~  579 (675)
                      +.|++.++||+|+||.||+|++     .+++.||||+++.. .....+.+.+|+.++++++||||+++++++.+.  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            5689999999999999999984     35889999999854 334567899999999999999999999999876  568


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++...  ...+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.
T Consensus       101 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccc
Confidence            9999999999999998432  345899999999999999999999987   99999999999999999999999999998


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +...
T Consensus       176 ~~~~  179 (302)
T 4e5w_A          176 IETD  179 (302)
T ss_dssp             CCTT
T ss_pred             ccCC
Confidence            7554

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.92  E-value=1.3e-24  Score=234.93  Aligned_cols=151  Identities=21%  Similarity=0.302  Sum_probs=135.3

Q ss_pred             hcCCcceeeeeCCc--CceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          506 ATENFSMECKLGEG--GFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G--~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ..++|++.++||+|  +||.||+|+.. +++.||||+++...  ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            34789999999999  99999999875 68999999997542  334567889999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||+++++|.+++... ....+++..+..|+.||+.||+|||+++   |+||||||+|||++.++.+||+|||++..+
T Consensus       103 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             EEEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             EEEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            999999999999998543 2245899999999999999999999998   999999999999999999999999998765

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.92  E-value=3.7e-25  Score=244.05  Aligned_cols=152  Identities=32%  Similarity=0.549  Sum_probs=132.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ..++|++.++||+|+||.||+|+..++..||||+++... ...++|.+|+.++++++||||+++++++.+ +..++||||
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~  259 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  259 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence            446789999999999999999999888889999998643 456789999999999999999999999876 678999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++|+|.+++... ....+++.+++.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+.+...
T Consensus       260 ~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  333 (452)
T 1fmk_A          260 MSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN  333 (452)
T ss_dssp             CTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred             hcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence            9999999999431 2245889999999999999999999987   999999999999999999999999999987543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.92  E-value=6.1e-25  Score=233.06  Aligned_cols=157  Identities=24%  Similarity=0.327  Sum_probs=133.7

Q ss_pred             HHHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc-----CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC
Q 005825          503 VAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ-----SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ  576 (675)
Q Consensus       503 ~~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~-----~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~  576 (675)
                      +....++|++.++||+|+||.||+|+.. +++.||+|++...     .....+.+.+|+.++++++||||+++++++.+.
T Consensus        21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  100 (345)
T 3hko_A           21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE  100 (345)
T ss_dssp             HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence            4556689999999999999999999874 5889999998643     234567899999999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCC-------------------------------------CcccCCHHHHHHHHHHHHHH
Q 005825          577 GEKILILEYMPNKSLDVFLFDPT-------------------------------------KKRLLGWQARIGIIEGIAQG  619 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~~ia~~  619 (675)
                      +..++||||+++|+|.+++....                                     ....+++.....|+.||+.|
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~  180 (345)
T 3hko_A          101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA  180 (345)
T ss_dssp             SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence            99999999999999999984110                                     01223567788899999999


Q ss_pred             HHHHHhcCCCceEecCCCCCCEEEcCCC--CeEEeeeccceecCC
Q 005825          620 LLYLHHYSRFRIIHRDLKASNVLLDRDM--NPKISDFGLARMFGG  662 (675)
Q Consensus       620 L~yLH~~~~~~iiHrDlkp~NILl~~~~--~~kl~DFGla~~~~~  662 (675)
                      |+|||+++   |+||||||+|||++.++  .+||+|||+|+.+..
T Consensus       181 l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~  222 (345)
T 3hko_A          181 LHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYK  222 (345)
T ss_dssp             HHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGG
T ss_pred             HHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccc
Confidence            99999997   99999999999998776  899999999997643

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.92  E-value=1.1e-24  Score=229.69  Aligned_cols=152  Identities=30%  Similarity=0.473  Sum_probs=135.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-----cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEE--eCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-----LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI--EQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~--~~~~~  579 (675)
                      .++|++.++||+|+||.||++++     .+++.||||++........+.+.+|+.++++++||||+++++++.  +....
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            36899999999999999999984     358899999998766666678999999999999999999999987  44568


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++...  ...+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+++.
T Consensus       102 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  176 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKL  176 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred             EEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEccccccee
Confidence            9999999999999998532  345899999999999999999999987   99999999999999999999999999998


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +...
T Consensus       177 ~~~~  180 (327)
T 3lxl_A          177 LPLD  180 (327)
T ss_dssp             CCTT
T ss_pred             cccC
Confidence            7544

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.92  E-value=6.7e-25  Score=226.65  Aligned_cols=151  Identities=28%  Similarity=0.450  Sum_probs=135.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-C-------cEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-G-------EEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-g-------~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      .++|++.+.||+|+||.||+|+... +       ..||+|.+........+.+.+|+.++++++||||+++++++.+++.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            4689999999999999999997643 3       4799999987666677889999999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC--------eE
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN--------PK  650 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~--------~k  650 (675)
                      .++||||+++++|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.        +|
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~k  161 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIK  161 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred             CEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceee
Confidence            99999999999999999542  334889999999999999999999998   999999999999998887        99


Q ss_pred             EeeeccceecCC
Q 005825          651 ISDFGLARMFGG  662 (675)
Q Consensus       651 l~DFGla~~~~~  662 (675)
                      |+|||+++....
T Consensus       162 l~Dfg~~~~~~~  173 (289)
T 4fvq_A          162 LSDPGISITVLP  173 (289)
T ss_dssp             ECCCCSCTTTSC
T ss_pred             eccCcccccccC
Confidence            999999976643

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.92  E-value=2.1e-24  Score=221.83  Aligned_cols=152  Identities=36%  Similarity=0.547  Sum_probs=134.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.+.||+|+||.||+|+..+++.||||.++.. ....+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC-cccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence            4689999999999999999999888889999999753 345678999999999999999999999986 45689999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ++++|.+++... ....+++..+..++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+++.+....
T Consensus        90 ~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T 1qpc_A           90 ENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (279)
T ss_dssp             TTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             CCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence            999999998431 1236899999999999999999999987   9999999999999999999999999999875543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.92  E-value=1.7e-24  Score=222.36  Aligned_cols=151  Identities=31%  Similarity=0.507  Sum_probs=135.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.+.||+|+||.||+|+. .+++.||||.+...   .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            46799999999999999999987 46899999999643   223457899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++...  ...+++..+..++.|+++||+|||+++   |+||||||+||++++++.+||+|||+++.+..
T Consensus        90 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             EECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             EecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            9999999999999542  346899999999999999999999987   99999999999999999999999999998753

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.92  E-value=2e-24  Score=223.83  Aligned_cols=150  Identities=27%  Similarity=0.351  Sum_probs=134.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|.+.+.||+|+||.||+++.. +++.||+|.+....   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            468999999999999999999875 47899999987532   23456789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++.   ....+++.++..++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+++.+..
T Consensus        94 ~e~~~~~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  167 (294)
T 2rku_A           94 LELCRRRSLLELHK---RRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEY  167 (294)
T ss_dssp             EECCTTCBHHHHHH---HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EecCCCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceeccc
Confidence            99999999999884   3346899999999999999999999997   99999999999999999999999999998753

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.92  E-value=9.2e-25  Score=238.53  Aligned_cols=152  Identities=26%  Similarity=0.354  Sum_probs=128.8

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--------ccCHHHHHHHHHHHHhcCCCceeeEEEEEEe
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--------GQGLEEFKNEMLLIAKLQHRNLVRILGCCIE  575 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--------~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~  575 (675)
                      ...++|.+.++||+|+||.||+|... +++.||||++....        ......+.+|+.++++++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            34689999999999999999999874 58999999987531        122345889999999999999999999975 


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC---CCeEEe
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD---MNPKIS  652 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~---~~~kl~  652 (675)
                      .+..++||||+++++|.+++.   ....+++.++..++.|++.||+|||+++   |+||||||+|||++.+   ..+||+
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~  284 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT  284 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTS---SSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred             cCceEEEEEcCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEe
Confidence            566899999999999999884   3456899999999999999999999987   9999999999999654   459999


Q ss_pred             eeccceecCCC
Q 005825          653 DFGLARMFGGD  663 (675)
Q Consensus       653 DFGla~~~~~~  663 (675)
                      |||+|+.+...
T Consensus       285 DFG~a~~~~~~  295 (419)
T 3i6u_A          285 DFGHSKILGET  295 (419)
T ss_dssp             CSSTTTSCC--
T ss_pred             ecccceecCCC
Confidence            99999987543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.92  E-value=1.9e-24  Score=226.34  Aligned_cols=149  Identities=26%  Similarity=0.363  Sum_probs=131.3

Q ss_pred             cCCccee-eeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEE
Q 005825          507 TENFSME-CKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       507 ~~~f~~~-~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .+.|++. +.||+|+||.||+|+. .+++.||||+++.......+.+.+|+.++.++ +||||+++++++.+.+..++||
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            3577774 6899999999999986 46899999999876666678899999999985 7999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC---eEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN---PKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DFGla~~~  660 (675)
                      ||+++++|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.   +||+|||+++.+
T Consensus        91 e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A           91 EKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             EcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence            99999999999943   346889999999999999999999997   999999999999998776   999999999876


Q ss_pred             C
Q 005825          661 G  661 (675)
Q Consensus       661 ~  661 (675)
                      .
T Consensus       165 ~  165 (316)
T 2ac3_A          165 K  165 (316)
T ss_dssp             -
T ss_pred             c
Confidence            4

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=1e-24  Score=222.37  Aligned_cols=150  Identities=31%  Similarity=0.554  Sum_probs=136.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.+.||+|+||.||+++..+++.||+|+++.. ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-TBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEcccc-CCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            4688999999999999999999988899999999864 334578999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++++|.+++...  ...+++..+..++.|++.||+|||+++   |+||||||+||++++++.+||+|||+++....
T Consensus        86 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  156 (267)
T 3t9t_A           86 EHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  156 (267)
T ss_dssp             TTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred             CCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccc
Confidence            999999999532  345889999999999999999999998   99999999999999999999999999987644

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.92  E-value=1.8e-24  Score=222.71  Aligned_cols=156  Identities=26%  Similarity=0.355  Sum_probs=135.3

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ..++|++.++||+|+||.||+|+.. +++.||||+++...  .....++.+|+..+.++ +||||+++++++.+.+..++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            3468999999999999999999875 68999999997532  33456788999999999 89999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCC-cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---------------
Q 005825          582 ILEYMPNKSLDVFLFDPTK-KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---------------  645 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---------------  645 (675)
                      ||||+++++|.+++..... ...+++..+..|+.||+.||+|||+++   |+||||||+|||++.               
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------------
T ss_pred             EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCccccccccccc
Confidence            9999999999999954211 256899999999999999999999997   999999999999984               


Q ss_pred             ----CCCeEEeeeccceecCCCc
Q 005825          646 ----DMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       646 ----~~~~kl~DFGla~~~~~~~  664 (675)
                          ...+||+|||+++......
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~~  188 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSPQ  188 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCSC
T ss_pred             ccCCceEEEEcccccccccCCcc
Confidence                4479999999999886544

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.92  E-value=1.2e-24  Score=224.79  Aligned_cols=154  Identities=25%  Similarity=0.418  Sum_probs=133.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|.+.++||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            367999999999999999999874 58899999987643 3456889999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE---cCCCCeEEeeeccceec
Q 005825          585 YMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMF  660 (675)
Q Consensus       585 y~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DFGla~~~  660 (675)
                      |+++++|.+++... .....+++..+..|+.|++.||+|||+++   |+||||||+|||+   +.++.+||+|||+|+.+
T Consensus       101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF  177 (285)
T ss_dssp             CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred             eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence            99999999988532 12356899999999999999999999987   9999999999999   45688999999999887


Q ss_pred             CCC
Q 005825          661 GGD  663 (675)
Q Consensus       661 ~~~  663 (675)
                      ...
T Consensus       178 ~~~  180 (285)
T 3is5_A          178 KSD  180 (285)
T ss_dssp             ---
T ss_pred             CCc
Confidence            544

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.92  E-value=3.7e-25  Score=232.39  Aligned_cols=156  Identities=29%  Similarity=0.464  Sum_probs=135.6

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG  577 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~  577 (675)
                      ...++|++.+.||+|+||.||+|+..      .++.||||.+.... .....++.+|+.++++++||||+++++++.+.+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~  101 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ  101 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence            34578999999999999999999754      36789999997543 234457899999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhcCCC-------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeE
Q 005825          578 EKILILEYMPNKSLDVFLFDPT-------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPK  650 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~k  650 (675)
                      ..++||||+++++|.+++....       ....+++..++.++.||+.||+|||+++   |+||||||+|||+++++.+|
T Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~k  178 (322)
T 1p4o_A          102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVK  178 (322)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEE
T ss_pred             ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEE
Confidence            9999999999999999985321       1245688999999999999999999997   99999999999999999999


Q ss_pred             EeeeccceecCCC
Q 005825          651 ISDFGLARMFGGD  663 (675)
Q Consensus       651 l~DFGla~~~~~~  663 (675)
                      |+|||+++.+...
T Consensus       179 l~Dfg~~~~~~~~  191 (322)
T 1p4o_A          179 IGDFGMTRDIYET  191 (322)
T ss_dssp             ECCTTCCCGGGGG
T ss_pred             ECcCccccccccc
Confidence            9999999876443

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.92  E-value=1.8e-24  Score=228.86  Aligned_cols=151  Identities=26%  Similarity=0.351  Sum_probs=135.3

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ..++|.+.+.||+|+||.||+++.. +++.||+|.+....   ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            3468999999999999999999875 47899999987532   2345678999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++++|.+++.   ....+++.++..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.+.
T Consensus       119 v~e~~~~~~L~~~~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  192 (335)
T 2owb_A          119 VLELCRRRSLLELHK---RRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  192 (335)
T ss_dssp             EECCCTTCBHHHHHH---HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEecCCCCCHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence            999999999999884   2356899999999999999999999997   9999999999999999999999999999875


Q ss_pred             C
Q 005825          662 G  662 (675)
Q Consensus       662 ~  662 (675)
                      .
T Consensus       193 ~  193 (335)
T 2owb_A          193 Y  193 (335)
T ss_dssp             S
T ss_pred             c
Confidence            3

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.91  E-value=1.8e-24  Score=221.29  Aligned_cols=152  Identities=34%  Similarity=0.556  Sum_probs=125.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcC----ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~----~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.++||+|+||.||+|+.. ++.||||+++...    ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            468999999999999999999974 8899999987532    23457899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC--------CCCeEEeee
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR--------DMNPKISDF  654 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~--------~~~~kl~DF  654 (675)
                      |||+++++|.+++.    ...+++..+..++.|++.||+|||+++..+|+||||||+|||+++        ++.+||+||
T Consensus        85 ~e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           85 MEFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            99999999999983    346889999999999999999999987666999999999999986        778999999


Q ss_pred             ccceecCCC
Q 005825          655 GLARMFGGD  663 (675)
Q Consensus       655 Gla~~~~~~  663 (675)
                      |+++.+...
T Consensus       161 g~~~~~~~~  169 (271)
T 3dtc_A          161 GLAREWHRT  169 (271)
T ss_dssp             CC-------
T ss_pred             Ccccccccc
Confidence            999877543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.91  E-value=1.1e-24  Score=235.73  Aligned_cols=160  Identities=24%  Similarity=0.360  Sum_probs=132.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcC--CCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQ--HRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~--H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..|++.++||+|+||.||++...+++.||||++...  .....+.+.+|+.++.+++  ||||+++++++...+..++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            569999999999999999999888999999998753  2334578999999999996  599999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      | +.+++|.+++..   ...+++.++..|+.||+.||+|||+++   |+||||||+|||++ ++.+||+|||+|+.+..+
T Consensus       136 E-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~  207 (390)
T 2zmd_A          136 E-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD  207 (390)
T ss_dssp             E-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred             e-cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence            9 578999999853   346788899999999999999999987   99999999999995 579999999999988654


Q ss_pred             cccCCCCceecC
Q 005825          664 ELQGNTKRIVGT  675 (675)
Q Consensus       664 ~~~~~~~~~~GT  675 (675)
                      .........+||
T Consensus       208 ~~~~~~~~~~gt  219 (390)
T 2zmd_A          208 TTSVVKDSQVGA  219 (390)
T ss_dssp             ------CCSCCC
T ss_pred             CccccCCCCCcC
Confidence            433222334454

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.91  E-value=3.2e-24  Score=220.86  Aligned_cols=150  Identities=29%  Similarity=0.422  Sum_probs=133.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc------cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG------QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ++|++.+.||+|+||.||+++.. +++.||||.++....      ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            57899999999999999999876 589999999875321      24678999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC----CeEEeeecc
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM----NPKISDFGL  656 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DFGl  656 (675)
                      +||||+++++|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+||++++++    .+||+|||+
T Consensus        85 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~  158 (283)
T 3bhy_A           85 LILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI  158 (283)
T ss_dssp             EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence            99999999999999843   446899999999999999999999987   99999999999998877    899999999


Q ss_pred             ceecCCC
Q 005825          657 ARMFGGD  663 (675)
Q Consensus       657 a~~~~~~  663 (675)
                      ++.+...
T Consensus       159 ~~~~~~~  165 (283)
T 3bhy_A          159 AHKIEAG  165 (283)
T ss_dssp             CEECC--
T ss_pred             ceeccCC
Confidence            9987543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.91  E-value=3.7e-24  Score=221.65  Aligned_cols=151  Identities=32%  Similarity=0.450  Sum_probs=132.3

Q ss_pred             CcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          509 NFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      .|.....||+|+||.||+|+. .+++.||||.+........+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            444556899999999999986 4588999999987666667889999999999999999999999999999999999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-CCCeEEeeeccceecCC
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-DMNPKISDFGLARMFGG  662 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DFGla~~~~~  662 (675)
                      +++|.+++........+++..+..++.||+.||+|||+++   |+||||||+||+++. ++.+||+|||+++.+..
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~  175 (295)
T 2clq_A          103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG  175 (295)
T ss_dssp             EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred             CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence            9999999965433445678889999999999999999987   999999999999987 89999999999998754

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.91  E-value=3.4e-24  Score=220.80  Aligned_cols=152  Identities=26%  Similarity=0.426  Sum_probs=134.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .++|++.++||+|+||.||+|... +++.||+|++....  ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            578999999999999999999875 58999999987532  234567889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC---eEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN---PKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DFGla~~~  660 (675)
                      ||+++++|.+++..   ...+++..+..++.|++.||+|||+++   |+||||||+||+++.++.   +||+|||+++..
T Consensus        85 e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~  158 (284)
T 3kk8_A           85 DLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  158 (284)
T ss_dssp             CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             ecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence            99999999888843   356899999999999999999999997   999999999999986655   999999999887


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ....
T Consensus       159 ~~~~  162 (284)
T 3kk8_A          159 NDSE  162 (284)
T ss_dssp             CSSC
T ss_pred             ccCc
Confidence            5443

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.91  E-value=8e-25  Score=228.97  Aligned_cols=161  Identities=29%  Similarity=0.446  Sum_probs=136.9

Q ss_pred             HHHHHHhcCCcceeeeeCCcCceeEEEEEE------cCCcEEEEEEecCcCc-cCHHHHHHHHHHHHhc-CCCceeeEEE
Q 005825          500 LASVAAATENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKL-QHRNLVRILG  571 (675)
Q Consensus       500 ~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~------~~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l-~H~nIv~l~g  571 (675)
                      ........++|++.+.||+|+||.||+|+.      .+++.||||+++.... ...+.+.+|+.++.++ +||||+++++
T Consensus        19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~   98 (316)
T 2xir_A           19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   98 (316)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence            334445568999999999999999999974      3468999999986432 3456799999999999 7999999999


Q ss_pred             EEEeCC-eEEEEEEecCCCCHHHHhcCCCC-------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCC
Q 005825          572 CCIEQG-EKILILEYMPNKSLDVFLFDPTK-------------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLK  637 (675)
Q Consensus       572 ~~~~~~-~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlk  637 (675)
                      ++.+.+ ..++||||+++++|.+++.....             ...+++..+..++.|++.||.|||+++   |+|||||
T Consensus        99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dik  175 (316)
T 2xir_A           99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLA  175 (316)
T ss_dssp             EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCS
T ss_pred             EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCc
Confidence            998765 48999999999999999965322             123789999999999999999999987   9999999


Q ss_pred             CCCEEEcCCCCeEEeeeccceecCCC
Q 005825          638 ASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       638 p~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |+|||++.++.+||+|||+++.+...
T Consensus       176 p~Nil~~~~~~~kl~Dfg~~~~~~~~  201 (316)
T 2xir_A          176 ARNILLSEKNVVKICDFGLARDIYKD  201 (316)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTC
T ss_pred             cceEEECCCCCEEECCCccccccccC
Confidence            99999999999999999999987544

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.91  E-value=7.4e-24  Score=220.59  Aligned_cols=151  Identities=29%  Similarity=0.439  Sum_probs=136.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .+.|++.++||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            467999999999999999999864 58999999997543 3456889999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+++++|.+++..    ..+++..+..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++.+....
T Consensus       101 ~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~  173 (303)
T 3a7i_A          101 YLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ  173 (303)
T ss_dssp             CCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred             eCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc
Confidence            9999999999842    45899999999999999999999997   9999999999999999999999999998876543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.91  E-value=1.3e-24  Score=224.27  Aligned_cols=154  Identities=32%  Similarity=0.531  Sum_probs=138.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ..++|++.++||+|+||.||+|+... ++.||||.++. .....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   89 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   89 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS-CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence            45789999999999999999998764 88999999975 34456789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+++++|.+++... ....+++..+..++.|++.||+|||+++   |+||||||+||+++.++.+||+|||+|+.+..+.
T Consensus        90 ~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  165 (288)
T 3kfa_A           90 FMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  165 (288)
T ss_dssp             CCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred             cCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence            99999999999542 2345899999999999999999999998   9999999999999999999999999999876443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.91  E-value=2.2e-24  Score=232.99  Aligned_cols=150  Identities=28%  Similarity=0.503  Sum_probs=124.0

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCC--e
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQG--E  578 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~--~  578 (675)
                      ...++|++.++||+|+||.||+|+. .+++.||||++...  .....+++.+|+.++.++. ||||+++++++...+  .
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            3457999999999999999999986 46899999999653  2334567889999999997 999999999998654  6


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++||||++ ++|..++..    ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+
T Consensus        86 ~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~  157 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSR  157 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence            899999998 589888843    46889999999999999999999998   9999999999999999999999999999


Q ss_pred             ecCC
Q 005825          659 MFGG  662 (675)
Q Consensus       659 ~~~~  662 (675)
                      .+..
T Consensus       158 ~~~~  161 (388)
T 3oz6_A          158 SFVN  161 (388)
T ss_dssp             ESSS
T ss_pred             cccc
Confidence            8743

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.91  E-value=6.7e-25  Score=247.03  Aligned_cols=152  Identities=32%  Similarity=0.549  Sum_probs=135.3

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ..++|++.++||+|+||.||+|++.++..||||+++... ...++|.+|+.+|++++||||+++++++.+ +..+|||||
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~  342 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY  342 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence            346789999999999999999999888889999998643 456789999999999999999999999876 678999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++|+|.+++... ....+++.+++.|+.||+.||+|||+++   |+||||||+||||++++.+||+|||+++.+...
T Consensus       343 ~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  416 (535)
T 2h8h_A          343 MSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN  416 (535)
T ss_dssp             CTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred             hcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence            9999999999431 2245889999999999999999999987   999999999999999999999999999987543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.91  E-value=1.5e-24  Score=228.55  Aligned_cols=141  Identities=26%  Similarity=0.337  Sum_probs=125.3

Q ss_pred             eeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEEEecCCCCH
Q 005825          514 CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILILEYMPNKSL  591 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~Ey~~~gsL  591 (675)
                      ++||+|+||.||+++.. +++.||||++...   ....+.+|+.++.++. ||||+++++++.+....++||||+++++|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   93 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL   93 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence            68999999999999875 5899999999642   4467889999999997 99999999999999999999999999999


Q ss_pred             HHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC---CeEEeeeccceecCCC
Q 005825          592 DVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM---NPKISDFGLARMFGGD  663 (675)
Q Consensus       592 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~---~~kl~DFGla~~~~~~  663 (675)
                      .+++..   ...+++.++..|+.||+.||+|||+++   |+||||||+|||++.++   .+||+|||+|+.....
T Consensus        94 ~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~  162 (325)
T 3kn6_A           94 FERIKK---KKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD  162 (325)
T ss_dssp             HHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred             HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence            999953   456899999999999999999999987   99999999999998765   8999999999977544

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.91  E-value=4.6e-24  Score=228.63  Aligned_cols=158  Identities=23%  Similarity=0.370  Sum_probs=138.5

Q ss_pred             HHHHHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--------cCHHHHHHHHHHHHhc-CCCceeeEE
Q 005825          501 ASVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--------QGLEEFKNEMLLIAKL-QHRNLVRIL  570 (675)
Q Consensus       501 ~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~f~~E~~il~~l-~H~nIv~l~  570 (675)
                      .......++|++.+.||+|+||.||+|+.. +|+.||||++.....        ...+.+.+|+.++.++ +||||++++
T Consensus        87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  166 (365)
T 2y7j_A           87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI  166 (365)
T ss_dssp             HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence            334455678999999999999999999985 699999999875431        1145688999999999 799999999


Q ss_pred             EEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeE
Q 005825          571 GCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPK  650 (675)
Q Consensus       571 g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~k  650 (675)
                      +++......++||||+++++|.+++..   ...+++..+..++.||+.||.|||+.+   |+||||||+|||+++++.+|
T Consensus       167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ik  240 (365)
T 2y7j_A          167 DSYESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIR  240 (365)
T ss_dssp             EEEEBSSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEE
T ss_pred             EEEeeCCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEE
Confidence            999999999999999999999999843   346899999999999999999999987   99999999999999999999


Q ss_pred             EeeeccceecCCCc
Q 005825          651 ISDFGLARMFGGDE  664 (675)
Q Consensus       651 l~DFGla~~~~~~~  664 (675)
                      |+|||+++.+....
T Consensus       241 l~DfG~~~~~~~~~  254 (365)
T 2y7j_A          241 LSDFGFSCHLEPGE  254 (365)
T ss_dssp             ECCCTTCEECCTTC
T ss_pred             EEecCcccccCCCc
Confidence            99999999886543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.91  E-value=4.9e-24  Score=238.43  Aligned_cols=152  Identities=29%  Similarity=0.445  Sum_probs=132.8

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-------------cCHHHHHHHHHHHHhcCCCceeeEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-------------QGLEEFKNEMLLIAKLQHRNLVRILG  571 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-------------~~~~~f~~E~~il~~l~H~nIv~l~g  571 (675)
                      ..++|++.++||+|+||+||+|+.. +++.||||+++....             ...+++.+|+.++++++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            4578999999999999999999875 588999999875321             34578999999999999999999999


Q ss_pred             EEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC---C
Q 005825          572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM---N  648 (675)
Q Consensus       572 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~---~  648 (675)
                      ++.+....++||||+++|+|.+++..   ...+++..+..|+.||+.||+|||+++   |+||||||+|||++.++   .
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~  187 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLN  187 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSS
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCcc
Confidence            99999999999999999999998843   356899999999999999999999997   99999999999998776   6


Q ss_pred             eEEeeeccceecCCC
Q 005825          649 PKISDFGLARMFGGD  663 (675)
Q Consensus       649 ~kl~DFGla~~~~~~  663 (675)
                      +||+|||+|+.+...
T Consensus       188 ~kl~Dfg~a~~~~~~  202 (504)
T 3q5i_A          188 IKIVDFGLSSFFSKD  202 (504)
T ss_dssp             EEECCCTTCEECCTT
T ss_pred             EEEEECCCCEEcCCC
Confidence            999999999988654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.91  E-value=1.8e-24  Score=222.38  Aligned_cols=150  Identities=30%  Similarity=0.402  Sum_probs=132.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||++...   .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            468999999999999999999875 4779999998643   223456799999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++..   ...+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||++.....
T Consensus        88 ~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~  161 (279)
T 3fdn_A           88 LEYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPS  161 (279)
T ss_dssp             ECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred             EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence            999999999999843   345889999999999999999999987   99999999999999999999999999976543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.91  E-value=5.9e-24  Score=223.23  Aligned_cols=147  Identities=37%  Similarity=0.549  Sum_probs=130.8

Q ss_pred             cceeeeeCCcCceeEEEEEEc-----CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeEEE
Q 005825          510 FSMECKLGEGGFGPVYKGRLL-----NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEKIL  581 (675)
Q Consensus       510 f~~~~~IG~G~fG~Vy~~~~~-----~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~~l  581 (675)
                      |++.++||+|+||.||++.+.     +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            489999999999999988642     58899999998643 23456799999999999999999999999884  57899


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++++|.+++..    ..+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+.
T Consensus       113 v~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  185 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  185 (318)
T ss_dssp             EECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred             EEecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence            9999999999999943    24889999999999999999999998   9999999999999999999999999999885


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       186 ~~  187 (318)
T 3lxp_A          186 EG  187 (318)
T ss_dssp             TT
T ss_pred             cc
Confidence            44

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.91  E-value=1.7e-24  Score=224.08  Aligned_cols=149  Identities=34%  Similarity=0.530  Sum_probs=123.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..++|++.++||+|+||.||+|+..  ..||||+++...  ....+.|.+|+.++++++||||+++++++ ..+..++||
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred             CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence            3478999999999999999999864  359999997543  33457799999999999999999999965 556789999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++++|.+++..  ....+++.+++.++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+++....
T Consensus        99 e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A           99 QWCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             ECCCEEEHHHHHTT--C---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             EecCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccc
Confidence            99999999999953  3456899999999999999999999987   99999999999999999999999999987654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.91  E-value=6.3e-24  Score=220.33  Aligned_cols=152  Identities=27%  Similarity=0.342  Sum_probs=135.3

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---------ccCHHHHHHHHHHHHhcC-CCceeeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---------GQGLEEFKNEMLLIAKLQ-HRNLVRILGCCI  574 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---------~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~  574 (675)
                      ..++|++.+.||+|+||.||+|+.. +++.||||.++...         ....+.+.+|+.+++++. ||||+++++++.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            4578999999999999999999875 58999999997532         122456889999999996 999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeee
Q 005825          575 EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDF  654 (675)
Q Consensus       575 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DF  654 (675)
                      +.+..++||||+++++|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+||+++.++.+||+||
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~df  168 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDF  168 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecc
Confidence            99999999999999999999943   346899999999999999999999987   999999999999999999999999


Q ss_pred             ccceecCCC
Q 005825          655 GLARMFGGD  663 (675)
Q Consensus       655 Gla~~~~~~  663 (675)
                      |+++.+...
T Consensus       169 g~~~~~~~~  177 (298)
T 1phk_A          169 GFSCQLDPG  177 (298)
T ss_dssp             TTCEECCTT
T ss_pred             cchhhcCCC
Confidence            999987544

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.91  E-value=8.4e-25  Score=230.91  Aligned_cols=155  Identities=34%  Similarity=0.490  Sum_probs=134.7

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC------CcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQG  577 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~------g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~  577 (675)
                      ..++|++.+.||+|+||.||+|+...      .+.||+|.++... ....+.+.+|+.+++++ +||||+++++++.+.+
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG  123 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence            45789999999999999999998643      2479999997643 23456799999999999 8999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHhcCCC-----------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC
Q 005825          578 EKILILEYMPNKSLDVFLFDPT-----------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD  646 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~  646 (675)
                      ..++||||+++|+|.+++....           ....+++..++.++.||+.||+|||+++   |+||||||+|||++++
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~  200 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNG  200 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGG
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCC
Confidence            9999999999999999985321           1235789999999999999999999987   9999999999999999


Q ss_pred             CCeEEeeeccceecCCC
Q 005825          647 MNPKISDFGLARMFGGD  663 (675)
Q Consensus       647 ~~~kl~DFGla~~~~~~  663 (675)
                      +.+||+|||+|+.+...
T Consensus       201 ~~~kl~Dfg~~~~~~~~  217 (333)
T 2i1m_A          201 HVAKIGDFGLARDIMND  217 (333)
T ss_dssp             GEEEBCCCGGGCCGGGC
T ss_pred             CeEEECccccccccccc
Confidence            99999999999977443

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.91  E-value=2.2e-24  Score=238.50  Aligned_cols=148  Identities=28%  Similarity=0.387  Sum_probs=124.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC------C
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ------G  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~------~  577 (675)
                      .++|++.++||+|+||.||+|+.. +++.||||++...  .....+++.+|+.+++.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            578999999999999999999864 5899999999753  233456788999999999999999999999654      4


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      +.++||||++++ |.+.+.     ..+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|
T Consensus       141 ~~~lv~E~~~~~-l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a  211 (464)
T 3ttj_A          141 DVYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  211 (464)
T ss_dssp             EEEEEEECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred             eEEEEEeCCCCC-HHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEee
Confidence            679999999865 555552     23888999999999999999999997   999999999999999999999999999


Q ss_pred             eecCCC
Q 005825          658 RMFGGD  663 (675)
Q Consensus       658 ~~~~~~  663 (675)
                      +.....
T Consensus       212 ~~~~~~  217 (464)
T 3ttj_A          212 RTAGTS  217 (464)
T ss_dssp             -----C
T ss_pred             eecCCC
Confidence            987543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.91  E-value=2.9e-24  Score=228.73  Aligned_cols=150  Identities=33%  Similarity=0.497  Sum_probs=131.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .+.|+..+.||+|+||.||+|+. .+++.||||++.....   ...+++.+|+.++++++||||+++++++.+.+..++|
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            35689999999999999999986 5689999999975322   2346789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||++ |+|.+++..  ....+++..+..++.|+++||+|||+++   |+||||||+|||+++++.+||+|||+|+.+..
T Consensus       133 ~e~~~-g~l~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  206 (348)
T 1u5q_A          133 MEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  206 (348)
T ss_dssp             EECCS-EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             EecCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence            99997 677777742  2346899999999999999999999997   99999999999999999999999999988754

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.91  E-value=1.5e-24  Score=223.35  Aligned_cols=151  Identities=28%  Similarity=0.421  Sum_probs=124.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|++.+.||+|+||.||+|+...    +..||+|.++... ....+.+.+|+.++++++||||+++++++. .+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence            4689999999999999999998643    4579999987532 334567999999999999999999999984 567899


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++++|.+++...  ...+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus        93 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (281)
T 1mp8_A           93 IMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME  167 (281)
T ss_dssp             EEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccC
Confidence            99999999999999532  335889999999999999999999987   9999999999999999999999999999875


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       168 ~~  169 (281)
T 1mp8_A          168 DS  169 (281)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.91  E-value=3.9e-24  Score=219.38  Aligned_cols=151  Identities=28%  Similarity=0.453  Sum_probs=135.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||.+...   .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            478999999999999999999875 6899999998653   234567899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+||+++.++.+||+|||+++.+..
T Consensus        90 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  163 (276)
T 2h6d_A           90 MEYVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD  163 (276)
T ss_dssp             EECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred             EeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCC
Confidence            999999999999843   345889999999999999999999998   99999999999999999999999999988754


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       164 ~  164 (276)
T 2h6d_A          164 G  164 (276)
T ss_dssp             -
T ss_pred             C
Confidence            3

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.91  E-value=1.2e-24  Score=227.59  Aligned_cols=157  Identities=32%  Similarity=0.539  Sum_probs=126.8

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEEc----CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG  577 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~  577 (675)
                      ....++|.+.+.||+|+||.||+|+..    .++.||||.++...  ....+.+.+|+.++++++||||+++++++.+.+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  109 (313)
T 3brb_A           30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS  109 (313)
T ss_dssp             BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred             ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence            345678999999999999999999764    34589999987542  334567999999999999999999999998765


Q ss_pred             e-----EEEEEEecCCCCHHHHhcCC---CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCe
Q 005825          578 E-----KILILEYMPNKSLDVFLFDP---TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP  649 (675)
Q Consensus       578 ~-----~~lV~Ey~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~  649 (675)
                      .     .++||||+++++|.+++...   .....+++..++.++.||++||.|||+++   |+||||||+|||+++++.+
T Consensus       110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~  186 (313)
T 3brb_A          110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTV  186 (313)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCE
T ss_pred             ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcE
Confidence            3     49999999999999998432   23456899999999999999999999987   9999999999999999999


Q ss_pred             EEeeeccceecCCC
Q 005825          650 KISDFGLARMFGGD  663 (675)
Q Consensus       650 kl~DFGla~~~~~~  663 (675)
                      ||+|||+++.+...
T Consensus       187 kl~Dfg~~~~~~~~  200 (313)
T 3brb_A          187 CVADFGLSKKIYSG  200 (313)
T ss_dssp             EECSCSCC------
T ss_pred             EEeecCcceecccc
Confidence            99999999877543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.91  E-value=3.8e-24  Score=228.54  Aligned_cols=159  Identities=27%  Similarity=0.281  Sum_probs=137.2

Q ss_pred             ccHHHHHHhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-----CCceeeEEE
Q 005825          498 FSLASVAAATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-----HRNLVRILG  571 (675)
Q Consensus       498 ~~~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-----H~nIv~l~g  571 (675)
                      +++.......++|++.++||+|+||.||+|+. .+++.||||+++. .....+.+..|+.++++++     ||||+++++
T Consensus        25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~  103 (360)
T 3llt_A           25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIVKYHG  103 (360)
T ss_dssp             CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred             eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence            34444445678999999999999999999987 4688999999974 2344567888999999997     999999999


Q ss_pred             EEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC------
Q 005825          572 CCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR------  645 (675)
Q Consensus       572 ~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~------  645 (675)
                      ++...+..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+++   |+||||||+|||+++      
T Consensus       104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~  178 (360)
T 3llt_A          104 KFMYYDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKS  178 (360)
T ss_dssp             EEEETTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEE
T ss_pred             eeeECCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcccccccc
Confidence            999999999999999 999999986432 235889999999999999999999987   999999999999975      


Q ss_pred             -------------------CCCeEEeeeccceecCC
Q 005825          646 -------------------DMNPKISDFGLARMFGG  662 (675)
Q Consensus       646 -------------------~~~~kl~DFGla~~~~~  662 (675)
                                         ++.+||+|||+|+....
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~  214 (360)
T 3llt_A          179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD  214 (360)
T ss_dssp             EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS
T ss_pred             ccchhcccccccccccccCCCCEEEEeccCceecCC
Confidence                               78999999999997644

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.91  E-value=2.1e-24  Score=225.50  Aligned_cols=151  Identities=29%  Similarity=0.442  Sum_probs=127.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.+.||+|+||.||+++.. ++.||||++..  ....+.|.+|+.++++++||||+++++++.  +..++||||+
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~   81 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA   81 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence            367899999999999999999874 78899999974  334578999999999999999999999886  3478999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC-eEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN-PKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~-~kl~DFGla~~~~~  662 (675)
                      ++++|.+++........+++..++.++.|+++||+|||+.+..+|+||||||+|||++.++. +||+|||+++.+..
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~  158 (307)
T 2eva_A           82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT  158 (307)
T ss_dssp             TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred             CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence            99999999976544456788999999999999999999943345999999999999998887 79999999987643

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.91  E-value=5.4e-24  Score=237.50  Aligned_cols=152  Identities=28%  Similarity=0.408  Sum_probs=130.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .+.|++.++||+|+||.||+|+.. +++.||||+++...  ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            357999999999999999999875 58899999997542  344678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DFGla~~~  660 (675)
                      ||+++|+|.+++.   ....+++..+..|+.||+.||+|||+++   |+||||||+|||++.   ++.+||+|||+|+.+
T Consensus       116 e~~~~g~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~  189 (494)
T 3lij_A          116 ECYKGGELFDEII---HRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF  189 (494)
T ss_dssp             ECCCSCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             ecCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence            9999999998884   3356889999999999999999999987   999999999999976   455999999999988


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ....
T Consensus       190 ~~~~  193 (494)
T 3lij_A          190 ENQK  193 (494)
T ss_dssp             BTTB
T ss_pred             CCCc
Confidence            6543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.91  E-value=2.7e-24  Score=226.53  Aligned_cols=152  Identities=34%  Similarity=0.580  Sum_probs=134.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-----cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC--eE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-----LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG--EK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~--~~  579 (675)
                      .++|++.++||+|+||.||+++.     .+++.||||++........+.+.+|+.++++++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            46789999999999999999984     358899999998766666778999999999999999999999987654  67


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++...  ...+++..++.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.
T Consensus       120 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             EEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhh
Confidence            9999999999999999542  245889999999999999999999987   99999999999999999999999999998


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +...
T Consensus       195 ~~~~  198 (326)
T 2w1i_A          195 LPQD  198 (326)
T ss_dssp             CCSS
T ss_pred             cccc
Confidence            8544

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.91  E-value=8.9e-24  Score=220.59  Aligned_cols=153  Identities=30%  Similarity=0.496  Sum_probs=128.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC-----ccCHHHHHHHHHHHHhcC---CCceeeEEEEEEeC
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS-----GQGLEEFKNEMLLIAKLQ---HRNLVRILGCCIEQ  576 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~f~~E~~il~~l~---H~nIv~l~g~~~~~  576 (675)
                      ..++|++.++||+|+||+||+|+. .+++.||||+++...     ......+.+|+.++++++   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            467999999999999999999986 468999999987422     122356778888777764   99999999999876


Q ss_pred             C-----eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEE
Q 005825          577 G-----EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKI  651 (675)
Q Consensus       577 ~-----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl  651 (675)
                      .     ..++||||++ ++|.+++.... ...+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEE
Confidence            5     5799999997 59999986432 234899999999999999999999998   999999999999999999999


Q ss_pred             eeeccceecCCC
Q 005825          652 SDFGLARMFGGD  663 (675)
Q Consensus       652 ~DFGla~~~~~~  663 (675)
                      +|||+|+.+...
T Consensus       162 ~Dfg~a~~~~~~  173 (308)
T 3g33_A          162 ADFGLARIYSYQ  173 (308)
T ss_dssp             CSCSCTTTSTTC
T ss_pred             eeCccccccCCC
Confidence            999999877543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.91  E-value=4.5e-24  Score=223.21  Aligned_cols=152  Identities=22%  Similarity=0.281  Sum_probs=130.9

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ..++|++.+.||+|+||.||+++.. +++.||||.+.....   ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence            4578999999999999999999875 688999999975432   234679999999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++++|.+++..   ...+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+++...
T Consensus       112 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          112 DMRLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             EEECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             EEEecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            9999999999999943   346899999999999999999999997   9999999999999999999999999998775


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       186 ~~  187 (309)
T 2h34_A          186 DE  187 (309)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.91  E-value=4.8e-24  Score=219.35  Aligned_cols=150  Identities=29%  Similarity=0.486  Sum_probs=132.3

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEe---------
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE---------  575 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~---------  575 (675)
                      ..++|++.+.||+|+||.||+|+.. +++.||||+++...    +.+.+|+.++++++||||+++++++..         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            3467999999999999999999885 68999999997532    467789999999999999999999864         


Q ss_pred             -------CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC
Q 005825          576 -------QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN  648 (675)
Q Consensus       576 -------~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~  648 (675)
                             ....++||||+++++|.+++... ....+++..+..++.||+.||.|||+++   |+||||||+|||+++++.
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~  160 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQ  160 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTE
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCC
Confidence                   34579999999999999999542 2346899999999999999999999987   999999999999999999


Q ss_pred             eEEeeeccceecCCC
Q 005825          649 PKISDFGLARMFGGD  663 (675)
Q Consensus       649 ~kl~DFGla~~~~~~  663 (675)
                      +||+|||+++.+...
T Consensus       161 ~kl~Dfg~~~~~~~~  175 (284)
T 2a19_B          161 VKIGDFGLVTSLKND  175 (284)
T ss_dssp             EEECCCTTCEESSCC
T ss_pred             EEECcchhheecccc
Confidence            999999999988654

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=7.2e-24  Score=218.97  Aligned_cols=151  Identities=31%  Similarity=0.533  Sum_probs=132.4

Q ss_pred             cCCcceee-eeCCcCceeEEEEEEc---CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMEC-KLGEGGFGPVYKGRLL---NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~-~IG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|.+.+ .||+|+||.||+|+..   +++.||||+++... ....+++.+|+.++++++||||+++++++ +.+..++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            35666666 9999999999999753   57889999998643 34567899999999999999999999999 5667999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++++|.+++..  ....+++..+..++.|++.||.|||+++   |+||||||+||++++++.+||+|||+++.+.
T Consensus        87 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~  161 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALG  161 (287)
T ss_dssp             EEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             EEEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeec
Confidence            9999999999999953  3446899999999999999999999997   9999999999999999999999999999885


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       162 ~~  163 (287)
T 1u59_A          162 AD  163 (287)
T ss_dssp             TC
T ss_pred             cC
Confidence            44

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.91  E-value=6.3e-24  Score=225.51  Aligned_cols=148  Identities=21%  Similarity=0.356  Sum_probs=128.9

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..++|++.+.||+|+||.||+++.. +++.||||++++...    .+.+|++++.++ +||||+++++++.+.+..++||
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            3568999999999999999999875 589999999976432    245688888887 7999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC----CCeEEeeecccee
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD----MNPKISDFGLARM  659 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~----~~~kl~DFGla~~  659 (675)
                      ||+++|+|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||+.++    +.+||+|||+|+.
T Consensus        96 E~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           96 ELMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             CCCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            99999999999853   356899999999999999999999997   9999999999998543    3599999999998


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +...
T Consensus       170 ~~~~  173 (342)
T 2qr7_A          170 LRAE  173 (342)
T ss_dssp             CBCT
T ss_pred             CcCC
Confidence            7544

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.91  E-value=3.6e-24  Score=244.74  Aligned_cols=150  Identities=31%  Similarity=0.524  Sum_probs=130.6

Q ss_pred             CCcceee-eeCCcCceeEEEEEEc---CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMEC-KLGEGGFGPVYKGRLL---NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~-~IG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      +++.+.+ +||+|+||.||+|.+.   ++..||||+++... ....++|.+|+.+|++++|||||++++++.. +..++|
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv  413 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV  413 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence            4555555 8999999999999764   46689999998643 3457889999999999999999999999976 569999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++|+|.+++..  ....+++..+..|+.||+.||+|||+++   |+||||||+||||++++.+||+|||+|+.+..
T Consensus       414 ~E~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~  488 (613)
T 2ozo_A          414 MEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGA  488 (613)
T ss_dssp             EECCTTCBHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred             EEeCCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence            999999999999954  2456899999999999999999999987   99999999999999999999999999998754


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      +
T Consensus       489 ~  489 (613)
T 2ozo_A          489 D  489 (613)
T ss_dssp             -
T ss_pred             C
Confidence            3

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.91  E-value=4.2e-24  Score=225.57  Aligned_cols=150  Identities=29%  Similarity=0.445  Sum_probs=130.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||++.....  ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            368999999999999999999875 489999999865332  23456889999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++++|..++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.+..
T Consensus       104 e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  176 (331)
T 4aaa_A          104 EFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA  176 (331)
T ss_dssp             ECCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             ecCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence            99999999988743   345899999999999999999999997   99999999999999999999999999987754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.91  E-value=3.1e-24  Score=229.77  Aligned_cols=152  Identities=22%  Similarity=0.345  Sum_probs=126.8

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC------CcEEEEEEecCcCccC-----------HHHHHHHHHHHHhcCCCceee
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQSGQG-----------LEEFKNEMLLIAKLQHRNLVR  568 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~------g~~vAvK~l~~~~~~~-----------~~~f~~E~~il~~l~H~nIv~  568 (675)
                      ..++|++.++||+|+||.||+|++..      ++.||||++.......           ...+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            45689999999999999999998754      4789999987543211           122445666777888999999


Q ss_pred             EEEEEEeC----CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc
Q 005825          569 ILGCCIEQ----GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD  644 (675)
Q Consensus       569 l~g~~~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~  644 (675)
                      +++++.+.    ...+|||||+ +++|.+++..  ....+++..++.|+.||+.||+|||+++   |+||||||+|||++
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~  186 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLN  186 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEE
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEe
Confidence            99999775    4589999999 9999999954  2356899999999999999999999997   99999999999999


Q ss_pred             --CCCCeEEeeeccceecCCC
Q 005825          645 --RDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       645 --~~~~~kl~DFGla~~~~~~  663 (675)
                        .++.+||+|||+|+.+...
T Consensus       187 ~~~~~~~kl~DFG~a~~~~~~  207 (364)
T 3op5_A          187 YKNPDQVYLVDYGLAYRYCPE  207 (364)
T ss_dssp             SSCTTCEEECCCTTCEESSGG
T ss_pred             cCCCCeEEEEECCcceecccC
Confidence              8899999999999987544

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.91  E-value=9.9e-24  Score=224.55  Aligned_cols=149  Identities=30%  Similarity=0.529  Sum_probs=129.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEe--------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIE--------  575 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~--------  575 (675)
                      .++|++.++||+|+||.||+|+. .+++.||||++....  ......+.+|+.++++++||||+++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            36899999999999999999987 468999999986542  2335678899999999999999999999987        


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      .+..++||||+++ +|...+...  ...+++.++..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg  169 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFG  169 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             CceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccch
Confidence            3468999999985 666666432  345899999999999999999999997   9999999999999999999999999


Q ss_pred             cceecC
Q 005825          656 LARMFG  661 (675)
Q Consensus       656 la~~~~  661 (675)
                      +|+.+.
T Consensus       170 ~a~~~~  175 (351)
T 3mi9_A          170 LARAFS  175 (351)
T ss_dssp             TCEECC
T ss_pred             hccccc
Confidence            999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.91  E-value=3.7e-24  Score=222.53  Aligned_cols=150  Identities=29%  Similarity=0.521  Sum_probs=132.8

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ..+.|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            4478999999999999999999885 489999999987666777899999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |+++++|.+++..  ....+++..+..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+++..
T Consensus        97 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  167 (302)
T 2j7t_A           97 FCPGGAVDAIMLE--LDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKN  167 (302)
T ss_dssp             CCTTEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred             eCCCCcHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence            9999999998853  2345889999999999999999999987   999999999999999999999999998643

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=3.2e-24  Score=228.04  Aligned_cols=153  Identities=31%  Similarity=0.456  Sum_probs=127.1

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-----cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-----QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-----~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      ...++|++.+.||+|+||.||+|+.. +++.||||+++....     ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence            34578999999999999999999875 589999999975321     123578899999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++||||+++ +|..++..  ....+++..+..++.|+++||+|||+++   |+||||||+|||++.++.+||+|||+|+
T Consensus        87 ~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~  160 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK  160 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred             eEEEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccce
Confidence            9999999986 88888853  2345788889999999999999999998   9999999999999999999999999999


Q ss_pred             ecCCC
Q 005825          659 MFGGD  663 (675)
Q Consensus       659 ~~~~~  663 (675)
                      .+...
T Consensus       161 ~~~~~  165 (346)
T 1ua2_A          161 SFGSP  165 (346)
T ss_dssp             TTTSC
T ss_pred             eccCC
Confidence            87543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.91  E-value=3.4e-24  Score=224.53  Aligned_cols=153  Identities=27%  Similarity=0.379  Sum_probs=133.2

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE----QGEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~----~~~~~  580 (675)
                      ..++|++.++||+|+||.||+++. .+++.||||++........+.+.+|+.++++++||||+++++++..    ....+
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  106 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW  106 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence            357899999999999999999987 5689999999876555667789999999999999999999999973    34789


Q ss_pred             EEEEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          581 LILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      +||||+++++|.+++... .....+++.++..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence            999999999999998532 12456899999999999999999999997   99999999999999999999999999876


Q ss_pred             cC
Q 005825          660 FG  661 (675)
Q Consensus       660 ~~  661 (675)
                      ..
T Consensus       184 ~~  185 (317)
T 2buj_A          184 AC  185 (317)
T ss_dssp             SC
T ss_pred             cc
Confidence            53

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.91  E-value=1e-23  Score=218.60  Aligned_cols=150  Identities=20%  Similarity=0.334  Sum_probs=132.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.+.||+|+||.||+|+. .+++.||||++...  ...+.+.+|+.++.++ +|+|++++++++.+....++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            46899999999999999999986 56899999998643  2345688999999999 79999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC-----eEEeeecccee
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN-----PKISDFGLARM  659 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~-----~kl~DFGla~~  659 (675)
                      |+ +++|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.     +||+|||+|+.
T Consensus        87 ~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           87 LL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             ec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            99 99999999532  335899999999999999999999987   999999999999987776     99999999998


Q ss_pred             cCCCc
Q 005825          660 FGGDE  664 (675)
Q Consensus       660 ~~~~~  664 (675)
                      +....
T Consensus       161 ~~~~~  165 (298)
T 1csn_A          161 YRDPV  165 (298)
T ss_dssp             SBCTT
T ss_pred             ccccc
Confidence            86543

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=6.2e-24  Score=224.29  Aligned_cols=153  Identities=28%  Similarity=0.408  Sum_probs=128.2

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhc--CCCceeeEEEEEEeC----C
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL--QHRNLVRILGCCIEQ----G  577 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l--~H~nIv~l~g~~~~~----~  577 (675)
                      ....++|++.++||+|+||.||+|+.. ++.||||++...   ....+..|.+++..+  +||||+++++++...    .
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred             cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence            344578999999999999999999875 899999998642   234455566666554  899999999999887    7


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcC-----CCceEecCCCCCCEEEcCCCCeEEe
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS-----RFRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----~~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                      ..++||||+++|+|.+++..    ..+++..++.++.|++.||+|||+++     ..+|+||||||+|||++.++.+||+
T Consensus       109 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~  184 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA  184 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred             ceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence            89999999999999999943    35899999999999999999999871     1239999999999999999999999


Q ss_pred             eeccceecCCCc
Q 005825          653 DFGLARMFGGDE  664 (675)
Q Consensus       653 DFGla~~~~~~~  664 (675)
                      |||+|+.+....
T Consensus       185 Dfg~a~~~~~~~  196 (337)
T 3mdy_A          185 DLGLAVKFISDT  196 (337)
T ss_dssp             CCTTCEECC---
T ss_pred             eCCCceeecccc
Confidence            999998875443

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.91  E-value=2.1e-24  Score=227.85  Aligned_cols=152  Identities=32%  Similarity=0.461  Sum_probs=127.4

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc--cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG--QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ....++|++.++||+|+||+||+|+.. +++.||||+++....  ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            345578999999999999999999864 689999999975432  23456889999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE-----cCCCCeEEeeec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL-----DRDMNPKISDFG  655 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl-----~~~~~~kl~DFG  655 (675)
                      +||||+++ +|.+++..   ...+++..+..|+.||+.||+|||+++   |+||||||+|||+     ++.+.+||+|||
T Consensus       110 lv~e~~~~-~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg  182 (329)
T 3gbz_A          110 LIFEYAEN-DLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFG  182 (329)
T ss_dssp             EEEECCSE-EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred             EEEecCCC-CHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCC
Confidence            99999985 99999843   345889999999999999999999997   9999999999999     455569999999


Q ss_pred             cceecCC
Q 005825          656 LARMFGG  662 (675)
Q Consensus       656 la~~~~~  662 (675)
                      +|+.+..
T Consensus       183 ~a~~~~~  189 (329)
T 3gbz_A          183 LARAFGI  189 (329)
T ss_dssp             HHHHHC-
T ss_pred             CccccCC
Confidence            9987753

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.91  E-value=3.9e-24  Score=228.60  Aligned_cols=159  Identities=25%  Similarity=0.364  Sum_probs=132.8

Q ss_pred             cHHHHHHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCcc-----------CHHHHHHHHHHHHhcCCCcee
Q 005825          499 SLASVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ-----------GLEEFKNEMLLIAKLQHRNLV  567 (675)
Q Consensus       499 ~~~~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~-----------~~~~f~~E~~il~~l~H~nIv  567 (675)
                      ...++....++|++.++||+|+||.||+|+..+++.||||++......           ..+.+.+|+.++++++||||+
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            355677888999999999999999999999888999999998643221           136799999999999999999


Q ss_pred             eEEEEEEeC-----CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEE
Q 005825          568 RILGCCIEQ-----GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVL  642 (675)
Q Consensus       568 ~l~g~~~~~-----~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NIL  642 (675)
                      ++++++...     ...++||||++ |+|.+++..  ....+++..+..++.||+.||.|||+++   |+||||||+|||
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl  166 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNIL  166 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEE
T ss_pred             ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEE
Confidence            999999643     36899999998 678777753  3346899999999999999999999997   999999999999


Q ss_pred             EcCCCCeEEeeeccceecCCC
Q 005825          643 LDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       643 l~~~~~~kl~DFGla~~~~~~  663 (675)
                      ++.++.+||+|||+|+.....
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~  187 (362)
T 3pg1_A          167 LADNNDITICDFNLAREDTAD  187 (362)
T ss_dssp             ECTTCCEEECCTTC-------
T ss_pred             EcCCCCEEEEecCcccccccc
Confidence            999999999999999865433

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.91  E-value=3.6e-24  Score=238.47  Aligned_cols=152  Identities=28%  Similarity=0.485  Sum_probs=134.9

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ..++|++.++||+|+||+||+++.. +++.||||++...  .....+.+.+|+.++++++||||+++++++.+....++|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            3468999999999999999999875 6899999998643  234567899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc---CCCCeEEeeecccee
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARM  659 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DFGla~~  659 (675)
                      |||+++++|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+|||++   .++.+||+|||+|+.
T Consensus       100 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  173 (486)
T 3mwu_A          100 GELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC  173 (486)
T ss_dssp             ECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred             EEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence            999999999988843   356899999999999999999999998   99999999999995   566899999999987


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +...
T Consensus       174 ~~~~  177 (486)
T 3mwu_A          174 FQQN  177 (486)
T ss_dssp             BCCC
T ss_pred             CCCC
Confidence            7544

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.91  E-value=7.4e-24  Score=218.43  Aligned_cols=150  Identities=28%  Similarity=0.409  Sum_probs=134.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||.+...   .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            368999999999999999999875 5789999998643   233457899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++..   ...+++..+..++.|++.||+|||+++   |+||||||+||+++.++.+||+|||++.....
T Consensus        93 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  166 (284)
T 2vgo_A           93 LEFAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPS  166 (284)
T ss_dssp             ECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred             EEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence            999999999999843   345889999999999999999999987   99999999999999999999999999987654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.91  E-value=7.5e-24  Score=229.82  Aligned_cols=147  Identities=24%  Similarity=0.314  Sum_probs=125.0

Q ss_pred             cCCccee-eeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHH-hcCCCceeeEEEEEEe----CCeE
Q 005825          507 TENFSME-CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIA-KLQHRNLVRILGCCIE----QGEK  579 (675)
Q Consensus       507 ~~~f~~~-~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~-~l~H~nIv~l~g~~~~----~~~~  579 (675)
                      .++|.+. ++||+|+||+||+++.. +++.||||+++.     ...+.+|+.++. ..+||||+++++++..    ....
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence            3567766 68999999999999875 588999999963     246778888874 4589999999999875    5578


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEeeecc
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGL  656 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DFGl  656 (675)
                      +|||||+++|+|.+++... ....+++..+..|+.||+.||+|||+++   |+||||||+|||++.   ++.+||+|||+
T Consensus       135 ~lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccc
Confidence            9999999999999999642 2345899999999999999999999987   999999999999998   78999999999


Q ss_pred             ceecCC
Q 005825          657 ARMFGG  662 (675)
Q Consensus       657 a~~~~~  662 (675)
                      |+....
T Consensus       211 a~~~~~  216 (400)
T 1nxk_A          211 AKETTS  216 (400)
T ss_dssp             CEECC-
T ss_pred             ccccCC
Confidence            997754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.91  E-value=3.2e-24  Score=227.83  Aligned_cols=152  Identities=26%  Similarity=0.406  Sum_probs=135.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccC-----------------HHHHHHHHHHHHhcCCCceeeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQG-----------------LEEFKNEMLLIAKLQHRNLVRI  569 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~-----------------~~~f~~E~~il~~l~H~nIv~l  569 (675)
                      .++|++.+.||+|+||.||+|+. +++.||||.+.......                 .+.+.+|+.++++++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            47899999999999999999998 89999999987432111                 1789999999999999999999


Q ss_pred             EEEEEeCCeEEEEEEecCCCCHHHH------hcCCCCcccCCHHHHHHHHHHHHHHHHHHHh-cCCCceEecCCCCCCEE
Q 005825          570 LGCCIEQGEKILILEYMPNKSLDVF------LFDPTKKRLLGWQARIGIIEGIAQGLLYLHH-YSRFRIIHRDLKASNVL  642 (675)
Q Consensus       570 ~g~~~~~~~~~lV~Ey~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlkp~NIL  642 (675)
                      ++++.+.+..++||||+++++|.++      +.. .....+++..+..++.|++.||+|||+ ++   |+||||||+|||
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil  184 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNIL  184 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEE
Confidence            9999999999999999999999998      432 224678999999999999999999998 76   999999999999


Q ss_pred             EcCCCCeEEeeeccceecCCC
Q 005825          643 LDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       643 l~~~~~~kl~DFGla~~~~~~  663 (675)
                      ++.++.+||+|||+++.+...
T Consensus       185 ~~~~~~~kl~dfg~~~~~~~~  205 (348)
T 2pml_X          185 MDKNGRVKLSDFGESEYMVDK  205 (348)
T ss_dssp             ECTTSCEEECCCTTCEECBTT
T ss_pred             EcCCCcEEEeccccccccccc
Confidence            999999999999999987543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=4.2e-24  Score=225.94  Aligned_cols=152  Identities=34%  Similarity=0.571  Sum_probs=129.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-----CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-----GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-----g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .++|.+.+.||+|+||.||+|+...     +..||||.++... ......+.+|+.++++++||||+++++++.+.+..+
T Consensus        43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence            4678889999999999999998643     2469999997543 234567999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||+++++|.+++..  ....+++..++.++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+++.+
T Consensus       123 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  197 (333)
T 1mqb_A          123 IITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVL  197 (333)
T ss_dssp             EEEECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             EEEeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhh
Confidence            99999999999999953  2346899999999999999999999997   999999999999999999999999999987


Q ss_pred             CCC
Q 005825          661 GGD  663 (675)
Q Consensus       661 ~~~  663 (675)
                      ...
T Consensus       198 ~~~  200 (333)
T 1mqb_A          198 EDD  200 (333)
T ss_dssp             ---
T ss_pred             ccc
Confidence            543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.91  E-value=2.4e-24  Score=226.84  Aligned_cols=149  Identities=30%  Similarity=0.441  Sum_probs=128.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.++||+|+||.||+|+.. +++.||||+++.... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            57999999999999999999875 689999999975432 2223456799999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++ ++|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+....
T Consensus        82 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  152 (324)
T 3mtl_A           82 LD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSI  152 (324)
T ss_dssp             CS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred             cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence            98 5888888532  346889999999999999999999997   99999999999999999999999999987643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.91  E-value=1.8e-23  Score=220.26  Aligned_cols=146  Identities=24%  Similarity=0.399  Sum_probs=130.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEe--CCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIE--QGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~--~~~~~lV  582 (675)
                      .++|++.++||+|+||.||+|+. .+++.||||+++.   ...+.+.+|+.++++++ ||||+++++++.+  ....++|
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            47899999999999999999986 5689999999974   34578999999999997 9999999999988  5678999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-CeEEeeeccceecC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLARMFG  661 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DFGla~~~~  661 (675)
                      |||+++++|.+++.      .+++.++..++.||+.||+|||+++   |+||||||+|||++.++ .+||+|||+|+.+.
T Consensus       112 ~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~  182 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH  182 (330)
T ss_dssp             EECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             EeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence            99999999999882      3788999999999999999999998   99999999999999776 89999999999875


Q ss_pred             CCc
Q 005825          662 GDE  664 (675)
Q Consensus       662 ~~~  664 (675)
                      ...
T Consensus       183 ~~~  185 (330)
T 3nsz_A          183 PGQ  185 (330)
T ss_dssp             TTC
T ss_pred             CCC
Confidence            443

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.91  E-value=3.5e-24  Score=238.43  Aligned_cols=151  Identities=29%  Similarity=0.466  Sum_probs=135.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.++||+|+||.||+++.. +++.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  104 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV  104 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            467999999999999999999875 68999999986532   34567899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE---cCCCCeEEeeecccee
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARM  659 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DFGla~~  659 (675)
                      |||+++++|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||+   +.++.+||+|||+|+.
T Consensus       105 ~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  178 (484)
T 3nyv_A          105 GEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH  178 (484)
T ss_dssp             ECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred             EecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence            999999999998853   346889999999999999999999997   9999999999999   5678999999999988


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +...
T Consensus       179 ~~~~  182 (484)
T 3nyv_A          179 FEAS  182 (484)
T ss_dssp             BCCC
T ss_pred             cccc
Confidence            7544

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.90  E-value=4.5e-24  Score=221.42  Aligned_cols=149  Identities=30%  Similarity=0.490  Sum_probs=132.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEe----------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE----------  575 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~----------  575 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||+++. .....+.+.+|+.++++++||||+++++++.+          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            467999999999999999999874 689999999964 33445789999999999999999999999865          


Q ss_pred             ---CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEe
Q 005825          576 ---QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       576 ---~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                         .+..++||||+++++|.+++...  ...+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEEC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEe
Confidence               34679999999999999999542  345778899999999999999999997   9999999999999999999999


Q ss_pred             eeccceecC
Q 005825          653 DFGLARMFG  661 (675)
Q Consensus       653 DFGla~~~~  661 (675)
                      |||+++.+.
T Consensus       159 dfg~~~~~~  167 (303)
T 1zy4_A          159 DFGLAKNVH  167 (303)
T ss_dssp             CCCCCSCTT
T ss_pred             eCcchhhcc
Confidence            999998774

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.90  E-value=1.4e-23  Score=219.50  Aligned_cols=152  Identities=29%  Similarity=0.497  Sum_probs=130.7

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ...+.|++.+.||+|+||.||+|+.. +++.||||.+...  ...+++.+|+.++.+++||||+++++++.+.+..++||
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM  103 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence            34578999999999999999999875 4899999999753  34578999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++++|.+++..  ....+++..+..++.+|+.||.|||+.+   |+|+||||+||+++.++.+||+|||+++.+...
T Consensus       104 e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  178 (314)
T 3com_A          104 EYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT  178 (314)
T ss_dssp             ECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred             ecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence            99999999999842  2346899999999999999999999987   999999999999999999999999999887544

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.90  E-value=8.8e-24  Score=222.85  Aligned_cols=161  Identities=26%  Similarity=0.377  Sum_probs=137.6

Q ss_pred             cHHHHHHhcCCccee-eeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcC-CCceeeEEEEE
Q 005825          499 SLASVAAATENFSME-CKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQ-HRNLVRILGCC  573 (675)
Q Consensus       499 ~~~~~~~~~~~f~~~-~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~-H~nIv~l~g~~  573 (675)
                      .+.......+.|.+. ++||+|+||.||+|+.. +++.||||+++...  .....++.+|+.++.++. ||||+++++++
T Consensus        19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~   98 (327)
T 3lm5_A           19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY   98 (327)
T ss_dssp             CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            344455666788887 88999999999999875 58999999997542  344678999999999995 69999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeE
Q 005825          574 IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPK  650 (675)
Q Consensus       574 ~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~k  650 (675)
                      .+.+..++||||+++++|.+++... ....+++.++..++.|++.||+|||+++   |+||||||+|||++.   ++.+|
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~k  174 (327)
T 3lm5_A           99 ENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIK  174 (327)
T ss_dssp             ECSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEE
T ss_pred             EeCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEE
Confidence            9999999999999999999998542 2356899999999999999999999997   999999999999988   78999


Q ss_pred             EeeeccceecCCC
Q 005825          651 ISDFGLARMFGGD  663 (675)
Q Consensus       651 l~DFGla~~~~~~  663 (675)
                      |+|||+|+.+...
T Consensus       175 L~Dfg~a~~~~~~  187 (327)
T 3lm5_A          175 IVDFGMSRKIGHA  187 (327)
T ss_dssp             ECCGGGCEEC---
T ss_pred             EeeCccccccCCc
Confidence            9999999987544

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.90  E-value=5.1e-24  Score=222.03  Aligned_cols=150  Identities=23%  Similarity=0.388  Sum_probs=131.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .++|.+.+.||+|+||.||+++.. +++.||||.++.......+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            468999999999999999999875 6899999999865444556799999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE---cCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++..   ...+++.....++.|++.||+|||+++   |+||||||+||++   ++++.+||+|||+++....
T Consensus        88 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  161 (304)
T 2jam_A           88 VSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN  161 (304)
T ss_dssp             CCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred             CCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence            999999998843   346889999999999999999999987   9999999999999   7889999999999987643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.90  E-value=7.6e-24  Score=220.47  Aligned_cols=151  Identities=26%  Similarity=0.387  Sum_probs=129.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC----ccCHHHHHHHHHHHHhcCCCceeeEEEEEE--eCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS----GQGLEEFKNEMLLIAKLQHRNLVRILGCCI--EQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~f~~E~~il~~l~H~nIv~l~g~~~--~~~~~  579 (675)
                      .++|++.+.||+|+||.||+++.. +++.||||.++...    ....+.+.+|+.++++++||||+++++++.  +....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            478999999999999999999874 58899999997532    344678999999999999999999999984  44578


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||++++ |.+++... ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.
T Consensus        84 ~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccc
Confidence            9999999987 66666432 2446899999999999999999999997   99999999999999999999999999998


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      +..
T Consensus       159 ~~~  161 (305)
T 2wtk_C          159 LHP  161 (305)
T ss_dssp             CCT
T ss_pred             cCc
Confidence            754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.90  E-value=3.8e-24  Score=225.74  Aligned_cols=152  Identities=36%  Similarity=0.580  Sum_probs=126.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCc----EEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGE----EVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~----~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .++|++.++||+|+||.||+|+.. +++    +||+|.+... .....+++.+|+.++++++||||+++++++.... .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            468999999999999999999864 344    3578877643 3456788999999999999999999999998754 78


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +|+||+++|+|.+++...  ...+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+
T Consensus        93 ~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~  167 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL  167 (327)
T ss_dssp             EEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred             EEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence            999999999999998542  345889999999999999999999997   999999999999999999999999999987


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ....
T Consensus       168 ~~~~  171 (327)
T 3lzb_A          168 GAEE  171 (327)
T ss_dssp             ----
T ss_pred             cCcc
Confidence            5443

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.90  E-value=3.4e-24  Score=228.97  Aligned_cols=148  Identities=26%  Similarity=0.343  Sum_probs=133.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||.||+++.. +++.||+|+++... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            468999999999999999999875 58999999997642 3345679999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      |+++++|.+++..   ...+++..+..++.+++.||+|||+. +   |+||||||+|||++.++.+||+|||+|+.+
T Consensus       112 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          112 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQL  182 (360)
T ss_dssp             CCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence            9999999999943   34688999999999999999999986 6   999999999999999999999999999765

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.90  E-value=9.1e-24  Score=221.05  Aligned_cols=148  Identities=28%  Similarity=0.429  Sum_probs=125.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEE-----------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI-----------  574 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~-----------  574 (675)
                      .++|++.++||+|+||.||+|+... ++.||||++........+++.+|+.++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            4789999999999999999998764 8999999998666666788999999999999999999999873           


Q ss_pred             ---eCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc-CCCCeE
Q 005825          575 ---EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD-RDMNPK  650 (675)
Q Consensus       575 ---~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~-~~~~~k  650 (675)
                         +....++||||++ |+|.+++.    ...+++..+..++.|++.||+|||+++   |+||||||+|||++ +++.+|
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k  161 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLK  161 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEE
T ss_pred             cccccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEE
Confidence               3467899999998 69999983    245889999999999999999999987   99999999999997 567999


Q ss_pred             EeeeccceecCC
Q 005825          651 ISDFGLARMFGG  662 (675)
Q Consensus       651 l~DFGla~~~~~  662 (675)
                      |+|||+++.+..
T Consensus       162 l~Dfg~~~~~~~  173 (320)
T 2i6l_A          162 IGDFGLARIMDP  173 (320)
T ss_dssp             ECCCTTCBCC--
T ss_pred             EccCccccccCC
Confidence            999999998753

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=2.6e-24  Score=231.20  Aligned_cols=151  Identities=30%  Similarity=0.525  Sum_probs=123.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEe-CCeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIE-QGEKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~-~~~~~l  581 (675)
                      ..|.+.++||+|+||.||+|+..+    +..||||.++... ....++|.+|+.++++++||||+++++++.+ .+..++
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence            357788999999999999998642    2468999987532 3456789999999999999999999999765 457899


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++|+|.+++...  ...+++.+++.++.||++||+|||+++   |+||||||+|||+++++.+||+|||+|+.+.
T Consensus       169 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          169 VLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             EEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccc
Confidence            99999999999999542  345788999999999999999999997   9999999999999999999999999998774


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       244 ~~  245 (373)
T 3c1x_A          244 DK  245 (373)
T ss_dssp             --
T ss_pred             cc
Confidence            43

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.90  E-value=3.6e-24  Score=225.60  Aligned_cols=153  Identities=34%  Similarity=0.520  Sum_probs=130.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE------cCCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL------LNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~------~~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .++|++.+.||+|+||.||+|+.      .+++.||||.+... ......++.+|+.++++++||||+++++++.+.+..
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            46899999999999999999984      34778999999753 334456799999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCC----CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEe
Q 005825          580 ILILEYMPNKSLDVFLFDPT----KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKIS  652 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~  652 (675)
                      ++||||+++++|.+++....    ....+++..++.++.||+.||.|||+++   |+||||||+|||++.   +..+||+
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~  185 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG  185 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence            99999999999999996432    1245889999999999999999999987   999999999999984   4569999


Q ss_pred             eeccceecCC
Q 005825          653 DFGLARMFGG  662 (675)
Q Consensus       653 DFGla~~~~~  662 (675)
                      |||+++.+..
T Consensus       186 Dfg~~~~~~~  195 (327)
T 2yfx_A          186 DFGMARDIYR  195 (327)
T ss_dssp             CCHHHHHHHC
T ss_pred             cccccccccc
Confidence            9999986643

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.90  E-value=5.3e-24  Score=223.95  Aligned_cols=155  Identities=30%  Similarity=0.481  Sum_probs=134.2

Q ss_pred             HHHhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEe-----
Q 005825          503 VAAATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIE-----  575 (675)
Q Consensus       503 ~~~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~-----  575 (675)
                      +....++|++.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.+++++ +||||+++++++..     
T Consensus        19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~   97 (326)
T 2x7f_A           19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG   97 (326)
T ss_dssp             CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred             ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence            344678999999999999999999987 46899999998753 34457899999999999 79999999999987     


Q ss_pred             -CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeee
Q 005825          576 -QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDF  654 (675)
Q Consensus       576 -~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DF  654 (675)
                       .+..++||||+++++|.+++... ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+||
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Df  173 (326)
T 2x7f_A           98 MDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDF  173 (326)
T ss_dssp             CCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCC
T ss_pred             ccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeC
Confidence             46789999999999999998543 2356889999999999999999999997   999999999999999999999999


Q ss_pred             ccceecCC
Q 005825          655 GLARMFGG  662 (675)
Q Consensus       655 Gla~~~~~  662 (675)
                      |+++.+..
T Consensus       174 g~~~~~~~  181 (326)
T 2x7f_A          174 GVSAQLDR  181 (326)
T ss_dssp             TTTC----
T ss_pred             cCceecCc
Confidence            99987753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.90  E-value=9.1e-24  Score=218.67  Aligned_cols=150  Identities=32%  Similarity=0.503  Sum_probs=130.8

Q ss_pred             cCCcceee-eeCCcCceeEEEEEEc---CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMEC-KLGEGGFGPVYKGRLL---NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~-~IG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .++|.+.+ .||+|+||.||+|.+.   .++.||||+++...  ....+++.+|+.++++++||||+++++++ +.+..+
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence            46788888 9999999999999652   36889999997543  22357899999999999999999999999 667889


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||+++++|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++.+
T Consensus        94 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  167 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKAL  167 (291)
T ss_dssp             EEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence            99999999999999953   345889999999999999999999997   999999999999999999999999999987


Q ss_pred             CCC
Q 005825          661 GGD  663 (675)
Q Consensus       661 ~~~  663 (675)
                      ...
T Consensus       168 ~~~  170 (291)
T 1xbb_A          168 RAD  170 (291)
T ss_dssp             CTT
T ss_pred             ccC
Confidence            544

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=4.9e-24  Score=221.04  Aligned_cols=151  Identities=31%  Similarity=0.457  Sum_probs=130.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE-EE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK-IL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~-~l  581 (675)
                      -.|...++||+|+||.||+|+..+    +..||+|.++... ....+.+.+|+.++++++||||+++++++.+.+.. ++
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  100 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV  100 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence            356667999999999999998643    2379999997543 23457899999999999999999999999877665 99


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+.+++|.+++..  ....+++..+..++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+|+.+.
T Consensus       101 v~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A          101 LLPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             EECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             EEecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            9999999999999964  2346789999999999999999999997   9999999999999999999999999998764


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       176 ~~  177 (298)
T 3pls_A          176 DR  177 (298)
T ss_dssp             TG
T ss_pred             CC
Confidence            43

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=4.8e-24  Score=228.70  Aligned_cols=148  Identities=28%  Similarity=0.422  Sum_probs=124.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~------  577 (675)
                      .++|++.+.||+|+||.||+|+. .+|+.||||++...  .....+++.+|+.++++++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            47899999999999999999987 46899999999653  2233567889999999999999999999997653      


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      ..++||||+ +++|.+++..    ..+++..+..++.||++||+|||+++   |+||||||+|||+++++.+||+|||+|
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a  175 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  175 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecc
Confidence            469999999 8899999843    35889999999999999999999998   999999999999999999999999999


Q ss_pred             eecCC
Q 005825          658 RMFGG  662 (675)
Q Consensus       658 ~~~~~  662 (675)
                      +....
T Consensus       176 ~~~~~  180 (367)
T 1cm8_A          176 RQADS  180 (367)
T ss_dssp             EECCS
T ss_pred             ccccc
Confidence            98754

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.90  E-value=5.7e-24  Score=220.81  Aligned_cols=153  Identities=31%  Similarity=0.533  Sum_probs=131.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEe-CCeE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIE-QGEK  579 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~-~~~~  579 (675)
                      ....|++.++||+|+||.||+|+..+    ...+|+|.++... ....+.+.+|+.++++++||||+++++++.+ .+..
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  102 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  102 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred             cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence            34578899999999999999998643    2368999987533 3345789999999999999999999999754 4578


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++..  ....+++.++..++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+|+.
T Consensus       103 ~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~  177 (298)
T 3f66_A          103 LVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARD  177 (298)
T ss_dssp             EEEEECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred             EEEEeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccc
Confidence            999999999999999954  2345789999999999999999999997   99999999999999999999999999997


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +...
T Consensus       178 ~~~~  181 (298)
T 3f66_A          178 MYDK  181 (298)
T ss_dssp             CSCG
T ss_pred             cccc
Confidence            7543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.90  E-value=8.6e-24  Score=220.84  Aligned_cols=154  Identities=27%  Similarity=0.452  Sum_probs=127.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.+.||+|+||.||+|+. .+++.||||+++...   ....+++.+|+.++++++||||+++++++.+.+..++|
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            35799999999999999999986 468999999997532   23456789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          583 LEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      |||+++++|.+++... .....+++..+..++.||+.||.|||+++   |+||||||+||+++.++.+||+|||+++.+.
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            9999999999998532 12346889999999999999999999987   9999999999999999999999999998775


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       188 ~~  189 (310)
T 2wqm_A          188 SK  189 (310)
T ss_dssp             --
T ss_pred             CC
Confidence            43

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.90  E-value=1.2e-23  Score=221.19  Aligned_cols=151  Identities=26%  Similarity=0.358  Sum_probs=128.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--------ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--------GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ  576 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--------~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~  576 (675)
                      ..++|++.+.||+|+||.||+|+.. +++.||||.+....        ......+.+|+.++++++||||+++++++...
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence            3468999999999999999999875 58899999987532        12234688999999999999999999998765


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC---eEEee
Q 005825          577 GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN---PKISD  653 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~---~kl~D  653 (675)
                      + .++||||+++++|.+++.   ....+++.....++.||+.||+|||+++   |+||||||+|||++.++.   +||+|
T Consensus        88 ~-~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~D  160 (322)
T 2ycf_A           88 D-YYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD  160 (322)
T ss_dssp             S-EEEEEECCTTEETHHHHS---TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECC
T ss_pred             c-eEEEEecCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEcc
Confidence            4 899999999999999984   3456899999999999999999999987   999999999999987654   99999


Q ss_pred             eccceecCCC
Q 005825          654 FGLARMFGGD  663 (675)
Q Consensus       654 FGla~~~~~~  663 (675)
                      ||+++.+...
T Consensus       161 fg~~~~~~~~  170 (322)
T 2ycf_A          161 FGHSKILGET  170 (322)
T ss_dssp             CTTCEECCCC
T ss_pred             Cccceecccc
Confidence            9999987543

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.90  E-value=1.1e-24  Score=234.43  Aligned_cols=152  Identities=16%  Similarity=0.233  Sum_probs=125.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHH---HHHHhcCCCceeeEE-------EE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEM---LLIAKLQHRNLVRIL-------GC  572 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~---~il~~l~H~nIv~l~-------g~  572 (675)
                      .++|++.+.||+|+||.||+|+. .+++.||||++...   .....+.+.+|+   .++++++|||||+++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46899999999999999999986 56899999999743   334457899999   555666899999998       66


Q ss_pred             EEeCCe-----------------EEEEEEecCCCCHHHHhcCCC----CcccCCHHHHHHHHHHHHHHHHHHHhcCCCce
Q 005825          573 CIEQGE-----------------KILILEYMPNKSLDVFLFDPT----KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI  631 (675)
Q Consensus       573 ~~~~~~-----------------~~lV~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i  631 (675)
                      +...+.                 .++||||+ +|+|.+++....    ....+++..++.|+.||+.||+|||+++   |
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence            665532                 78999999 689999985321    1223446888899999999999999997   9


Q ss_pred             EecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          632 IHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       632 iHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +||||||+|||++.++.+||+|||+|+..+.
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~  258 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA  258 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC
Confidence            9999999999999999999999999997543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.90  E-value=9.8e-24  Score=222.90  Aligned_cols=149  Identities=34%  Similarity=0.544  Sum_probs=123.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHH--HHhcCCCceeeEEEEEEe-----CCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLL--IAKLQHRNLVRILGCCIE-----QGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~i--l~~l~H~nIv~l~g~~~~-----~~~~  579 (675)
                      .++|++.++||+|+||.||+|+. +++.||||+++..   ....+..|..+  +..++||||+++++.+..     ....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            47899999999999999999977 6899999999743   23445555555  445899999999986643     2257


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcC------CCceEecCCCCCCEEEcCCCCeEEee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS------RFRIIHRDLKASNVLLDRDMNPKISD  653 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~iiHrDlkp~NILl~~~~~~kl~D  653 (675)
                      ++||||+++|+|.+++..    ...++..+..|+.||++||+|||+..      ..+|+||||||+|||++.++.+||+|
T Consensus        88 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D  163 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD  163 (336)
T ss_dssp             EEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred             EEEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence            899999999999999943    23588999999999999999999881      11399999999999999999999999


Q ss_pred             eccceecCCC
Q 005825          654 FGLARMFGGD  663 (675)
Q Consensus       654 FGla~~~~~~  663 (675)
                      ||+|+.+...
T Consensus       164 FG~a~~~~~~  173 (336)
T 3g2f_A          164 FGLSMRLTGN  173 (336)
T ss_dssp             CTTCEECSSS
T ss_pred             ccceeecccc
Confidence            9999987543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.90  E-value=1.8e-23  Score=216.23  Aligned_cols=144  Identities=13%  Similarity=0.076  Sum_probs=127.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.++||+|+||.||+|+... ++.||||.+.....   ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            3689999999999999999998754 89999999986432   2347899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      |||+++++|.+++..    . ....+...|+.||+.||+|||+++   |+||||||+|||+++++.+||+++|...
T Consensus       110 ~e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~~~~  177 (286)
T 3uqc_A          110 AEWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPATMP  177 (286)
T ss_dssp             EECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred             EEecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEeccccC
Confidence            999999999999932    1 245567889999999999999998   9999999999999999999999877543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.90  E-value=1.1e-23  Score=222.04  Aligned_cols=150  Identities=34%  Similarity=0.586  Sum_probs=130.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcE--EEEEEecCc-CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEE--VAVKRLSSQ-SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~--vAvK~l~~~-~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ++|++.+.||+|+||.||+|+.. ++..  +|||.++.. .....+.+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            68999999999999999999864 4654  499998753 334556799999999999 899999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCe
Q 005825          583 LEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP  649 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~  649 (675)
                      |||+++++|.+++....             ....+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence            99999999999996532             2346899999999999999999999987   9999999999999999999


Q ss_pred             EEeeeccceec
Q 005825          650 KISDFGLARMF  660 (675)
Q Consensus       650 kl~DFGla~~~  660 (675)
                      ||+|||+++..
T Consensus       182 kL~Dfg~~~~~  192 (327)
T 1fvr_A          182 KIADFGLSRGQ  192 (327)
T ss_dssp             EECCTTCEESS
T ss_pred             EEcccCcCccc
Confidence            99999999854

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.90  E-value=2.2e-23  Score=220.73  Aligned_cols=150  Identities=29%  Similarity=0.424  Sum_probs=132.7

Q ss_pred             HHHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHh--cCCCceeeEEEEEEeCC---
Q 005825          503 VAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAK--LQHRNLVRILGCCIEQG---  577 (675)
Q Consensus       503 ~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~--l~H~nIv~l~g~~~~~~---  577 (675)
                      .....++|.+.+.||+|+||.||+|+. +++.||||++...   ..+.+..|++++..  ++||||+++++++....   
T Consensus        37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~  112 (342)
T 1b6c_B           37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW  112 (342)
T ss_dssp             HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred             cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence            344567999999999999999999988 5899999999642   34678889998887  78999999999998876   


Q ss_pred             -eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHH--------hcCCCceEecCCCCCCEEEcCCCC
Q 005825          578 -EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH--------HYSRFRIIHRDLKASNVLLDRDMN  648 (675)
Q Consensus       578 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--------~~~~~~iiHrDlkp~NILl~~~~~  648 (675)
                       ..++||||+++|+|.+++..    ..+++.+++.++.|++.||+|||        +.+   |+||||||+|||+++++.
T Consensus       113 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~  185 (342)
T 1b6c_B          113 TQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGT  185 (342)
T ss_dssp             CCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSC
T ss_pred             ceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCC
Confidence             78999999999999999943    35889999999999999999999        555   999999999999999999


Q ss_pred             eEEeeeccceecCCC
Q 005825          649 PKISDFGLARMFGGD  663 (675)
Q Consensus       649 ~kl~DFGla~~~~~~  663 (675)
                      +||+|||+|+.+...
T Consensus       186 ~kL~Dfg~~~~~~~~  200 (342)
T 1b6c_B          186 CCIADLGLAVRHDSA  200 (342)
T ss_dssp             EEECCCTTCEEEETT
T ss_pred             EEEEECCCceecccc
Confidence            999999999887554

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.90  E-value=3.4e-24  Score=222.60  Aligned_cols=155  Identities=25%  Similarity=0.415  Sum_probs=121.1

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ...++|++.+.||+|+||.||+|+. .+++.||||++.... ....+++.+|+.++++++||||+++++++...+..++|
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence            4468999999999999999999986 468899999987532 34457789999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcC-----CCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          583 LEYMPNKSLDVFLFD-----PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~-----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      |||+++++|.+++..     ......+++..+..++.||+.||+|||+++   |+||||||+||++++++.+||+|||++
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVS  168 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccch
Confidence            999999999999853     112456899999999999999999999987   999999999999999999999999999


Q ss_pred             eecCC
Q 005825          658 RMFGG  662 (675)
Q Consensus       658 ~~~~~  662 (675)
                      +.+..
T Consensus       169 ~~~~~  173 (303)
T 2vwi_A          169 AFLAT  173 (303)
T ss_dssp             HHCC-
T ss_pred             heecc
Confidence            87643

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.90  E-value=8.1e-24  Score=224.85  Aligned_cols=150  Identities=18%  Similarity=0.294  Sum_probs=124.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc----CCcEEEEEEecCcCcc-----------CHHHHHHHHHHHHhcCCCceeeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQSGQ-----------GLEEFKNEMLLIAKLQHRNLVRILG  571 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~----~g~~vAvK~l~~~~~~-----------~~~~f~~E~~il~~l~H~nIv~l~g  571 (675)
                      .++|++.++||+|+||.||+|+..    .+..+|||++......           ..+.+.+|+.++..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            468999999999999999999875    5778999998754321           1234677888999999999999999


Q ss_pred             EEEe----CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC
Q 005825          572 CCIE----QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM  647 (675)
Q Consensus       572 ~~~~----~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~  647 (675)
                      ++..    ....++||||+ +++|.+++..   ...+++.+++.|+.||+.||+|||+++   |+||||||+|||++.++
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ---NGTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBG---GGBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSS
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCC
Confidence            9988    67899999999 9999999843   337899999999999999999999987   99999999999999887


Q ss_pred             --CeEEeeeccceecCCC
Q 005825          648 --NPKISDFGLARMFGGD  663 (675)
Q Consensus       648 --~~kl~DFGla~~~~~~  663 (675)
                        .+||+|||+|+.+...
T Consensus       189 ~~~~kL~Dfg~a~~~~~~  206 (345)
T 2v62_A          189 PDQVYLADYGLSYRYCPN  206 (345)
T ss_dssp             TTSEEECCCTTCEESSGG
T ss_pred             CCcEEEEeCCCceecccc
Confidence              9999999999987543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.90  E-value=5e-24  Score=244.27  Aligned_cols=144  Identities=33%  Similarity=0.502  Sum_probs=126.3

Q ss_pred             eeeCCcCceeEEEEEEc---CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLL---NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      ++||+|+||.||+|.+.   .++.||||+++...  ....++|.+|+.++++++|||||++++++. .+..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence            47999999999999653   46789999998643  334678999999999999999999999986 4568899999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+|.+++.   ....+++..+..|+.||+.||+|||+++   |+||||||+||||++++.+||+|||+|+.+..++
T Consensus       454 g~L~~~l~---~~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~  523 (635)
T 4fl3_A          454 GPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  523 (635)
T ss_dssp             EEHHHHHH---HCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--
T ss_pred             CCHHHHHh---hCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCc
Confidence            99999994   3456899999999999999999999997   9999999999999999999999999999875543

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.90  E-value=1.8e-23  Score=216.93  Aligned_cols=150  Identities=32%  Similarity=0.507  Sum_probs=130.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|++.++||+|+||.||+|+.. +++.||||+++...  ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            68999999999999999999875 68999999987532  2345778999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |++ ++|.+++... ....+++..+..++.||+.||+|||+++   |+||||||+||+++.++.+||+|||+++.+..
T Consensus        83 ~~~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  155 (299)
T 2r3i_A           83 FLH-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV  155 (299)
T ss_dssp             CCS-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             ccc-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence            998 6999988543 2245788999999999999999999997   99999999999999999999999999987753

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.90  E-value=1.9e-23  Score=225.26  Aligned_cols=153  Identities=24%  Similarity=0.375  Sum_probs=125.9

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC------
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ------  576 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~------  576 (675)
                      ....++|++.++||+|+||.||+|+. .+++.||||++.....    ...+|+.+++.++||||+++++++...      
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence            34568999999999999999999986 5689999999875322    234699999999999999999998543      


Q ss_pred             --------------------------------CeEEEEEEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHH
Q 005825          577 --------------------------------GEKILILEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYL  623 (675)
Q Consensus       577 --------------------------------~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yL  623 (675)
                                                      ...++||||++ ++|.+.+... .....+++..+..++.||++||+||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                            34789999998 5777776431 2345689999999999999999999


Q ss_pred             HhcCCCceEecCCCCCCEEEc-CCCCeEEeeeccceecCCCc
Q 005825          624 HHYSRFRIIHRDLKASNVLLD-RDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       624 H~~~~~~iiHrDlkp~NILl~-~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+++   |+||||||+|||++ +++.+||+|||+|+.+...+
T Consensus       158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~  196 (383)
T 3eb0_A          158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE  196 (383)
T ss_dssp             HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS
T ss_pred             HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC
Confidence            9987   99999999999998 68899999999999875443

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.90  E-value=1.9e-23  Score=223.70  Aligned_cols=149  Identities=28%  Similarity=0.398  Sum_probs=131.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC-----CeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ-----GEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~-----~~~  579 (675)
                      .++|++.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++.+++||||+++++++...     ...
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            468999999999999999999864 58899999997533 23346789999999999999999999999765     368


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||++ ++|.+++..    ..+++..+..|+.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.
T Consensus       106 ~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          106 YIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV  177 (364)
T ss_dssp             EEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEe
Confidence            99999997 589888842    35889999999999999999999998   99999999999999999999999999998


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      ....
T Consensus       178 ~~~~  181 (364)
T 3qyz_A          178 ADPD  181 (364)
T ss_dssp             CCGG
T ss_pred             cCCC
Confidence            7544

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.90  E-value=1.2e-23  Score=227.74  Aligned_cols=151  Identities=26%  Similarity=0.411  Sum_probs=125.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe------EE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE------KI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~------~~  580 (675)
                      ..+|++.++||+|+||.||+|+...+..||+|++.....    ...+|+.+++.++||||+++++++...+.      .+
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            357999999999999999999987777799998865322    22369999999999999999999965443      78


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc-CCCCeEEeeecccee
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD-RDMNPKISDFGLARM  659 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DFGla~~  659 (675)
                      +||||++++.+............+++..+..++.||++||+|||+++   |+||||||+|||++ +++.+||+|||+|+.
T Consensus       115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~  191 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKI  191 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence            99999988655544322223456889999999999999999999987   99999999999999 799999999999998


Q ss_pred             cCCCc
Q 005825          660 FGGDE  664 (675)
Q Consensus       660 ~~~~~  664 (675)
                      +...+
T Consensus       192 ~~~~~  196 (394)
T 4e7w_A          192 LIAGE  196 (394)
T ss_dssp             CCTTC
T ss_pred             ccCCC
Confidence            75443

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.90  E-value=3.2e-23  Score=213.91  Aligned_cols=151  Identities=30%  Similarity=0.576  Sum_probs=130.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCcc-------CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQ-------GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~-------~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~  578 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||++......       ..+.+.+|+.++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            478999999999999999999874 6899999998653322       1267899999999999999999999987655 


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC-----eEEee
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN-----PKISD  653 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~-----~kl~D  653 (675)
                       ++||||+++++|.+++...  ...+++..+..++.|++.||+|||+++ .+|+||||||+|||++.++.     +||+|
T Consensus        97 -~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~D  172 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVAD  172 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred             -eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence             6999999999998888543  346899999999999999999999874 34999999999999988776     99999


Q ss_pred             eccceecCC
Q 005825          654 FGLARMFGG  662 (675)
Q Consensus       654 FGla~~~~~  662 (675)
                      ||+|+....
T Consensus       173 fg~~~~~~~  181 (287)
T 4f0f_A          173 FGLSQQSVH  181 (287)
T ss_dssp             CTTCBCCSS
T ss_pred             CCccccccc
Confidence            999986543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.90  E-value=1.3e-23  Score=214.51  Aligned_cols=153  Identities=25%  Similarity=0.406  Sum_probs=133.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC--CeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ--GEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~--~~~~lV  582 (675)
                      .++|++.++||+|+||.||+|+.. ++.||||+++...  ....++|.+|+.++++++||||+++++++.+.  +..++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            367899999999999999999984 8899999997542  33456799999999999999999999999887  678999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++++|.+++... ....+++..+..++.|++.||+|||+++ .+|+||||||+|||+++++.+||+|||++.....
T Consensus        88 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~  165 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS  165 (271)
T ss_dssp             EECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred             ecccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence            9999999999999653 2335899999999999999999999864 3599999999999999999999999998876543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.90  E-value=2.2e-23  Score=215.50  Aligned_cols=152  Identities=29%  Similarity=0.432  Sum_probs=130.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE----QGEKI  580 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~----~~~~~  580 (675)
                      ..|.+.++||+|+||.||+|... ++..||+|.+...  .....+.+.+|+.++++++||||+++++++..    ....+
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            45788899999999999999874 5889999998753  23345679999999999999999999999875    34689


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc-CCCCeEEeeecccee
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD-RDMNPKISDFGLARM  659 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DFGla~~  659 (675)
                      +||||+++++|.+++.   ....+++..+..++.||+.||+|||+++ .+|+||||||+|||++ +++.+||+|||+++.
T Consensus       106 lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLK---RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEECCCSCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             EEEEecCCCCHHHHHH---HccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence            9999999999999994   3356889999999999999999999874 3599999999999997 789999999999986


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      ....
T Consensus       182 ~~~~  185 (290)
T 1t4h_A          182 KRAS  185 (290)
T ss_dssp             CCTT
T ss_pred             cccc
Confidence            6443

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.90  E-value=8.6e-24  Score=222.91  Aligned_cols=155  Identities=29%  Similarity=0.385  Sum_probs=133.6

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEe--------
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIE--------  575 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~--------  575 (675)
                      ...+|++.++||+|+||.||+++.. +++.||||++........+.+.+|+.++.++. ||||+++++++..        
T Consensus        26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~  105 (337)
T 3ll6_A           26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG  105 (337)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred             cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence            3468999999999999999999874 68999999997655556678999999999996 9999999999953        


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      ....++||||++ |+|.+++........+++.++..|+.||+.||+|||+++ .+|+||||||+|||+++++.+||+|||
T Consensus       106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg  183 (337)
T 3ll6_A          106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFG  183 (337)
T ss_dssp             SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred             CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCc
Confidence            335799999996 789888854334456899999999999999999999874 349999999999999999999999999


Q ss_pred             cceecCC
Q 005825          656 LARMFGG  662 (675)
Q Consensus       656 la~~~~~  662 (675)
                      +++.+..
T Consensus       184 ~~~~~~~  190 (337)
T 3ll6_A          184 SATTISH  190 (337)
T ss_dssp             TCBCCSS
T ss_pred             cceeccc
Confidence            9998754

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.90  E-value=3.4e-24  Score=242.23  Aligned_cols=141  Identities=18%  Similarity=0.221  Sum_probs=111.2

Q ss_pred             eeCCcCceeEEEEE-EcCCcEEEEEEecCcC----------ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEE
Q 005825          515 KLGEGGFGPVYKGR-LLNGEEVAVKRLSSQS----------GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       515 ~IG~G~fG~Vy~~~-~~~g~~vAvK~l~~~~----------~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ..+.|++|.+..++ .--|+.+|||.+.+..          ....++|.+|+++|+++ +|+||+++++++.+.+..|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            46677777776653 3358889999987531          22346799999999999 799999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||++|++|.++|.+   .+.++..   +|+.||+.||+|||+++   ||||||||+||||++++++||+|||+|+.+..
T Consensus       321 MEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          321 MEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             EECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             EecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            999999999999954   3455553   48899999999999998   99999999999999999999999999998865


Q ss_pred             Cc
Q 005825          663 DE  664 (675)
Q Consensus       663 ~~  664 (675)
                      +.
T Consensus       392 ~~  393 (569)
T 4azs_A          392 DC  393 (569)
T ss_dssp             --
T ss_pred             CC
Confidence            44

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.90  E-value=9e-24  Score=217.01  Aligned_cols=157  Identities=28%  Similarity=0.447  Sum_probs=131.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEe--CCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIE--QGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~--~~~~~l  581 (675)
                      .++|++.+.||+|+||.||+++.. +++.||+|.+....  ....+.+.+|+.++++++||||+++++++.+  .+..++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            468999999999999999999875 68999999997532  2345679999999999999999999998864  568999


Q ss_pred             EEEecCCCCHHHHhcCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcC--CCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          582 ILEYMPNKSLDVFLFDPT-KKRLLGWQARIGIIEGIAQGLLYLHHYS--RFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      ||||+++++|.+++.... ....+++..++.++.|++.||+|||+.+  ..+|+||||||+|||+++++.+||+|||+++
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            999999999999985421 2335899999999999999999999875  2349999999999999999999999999998


Q ss_pred             ecCCC
Q 005825          659 MFGGD  663 (675)
Q Consensus       659 ~~~~~  663 (675)
                      .+...
T Consensus       165 ~~~~~  169 (279)
T 2w5a_A          165 ILNHD  169 (279)
T ss_dssp             HC---
T ss_pred             eeccc
Confidence            77543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.90  E-value=1.1e-23  Score=216.73  Aligned_cols=152  Identities=30%  Similarity=0.458  Sum_probs=130.4

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ..++|.+.+.||+|+||.||+|+..+    +..||||.++... ....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            34789999999999999999998643    3469999998642 3346789999999999999999999999765 4568


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||+++++|.+++..  ....+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+++.+
T Consensus        89 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  163 (281)
T 3cc6_A           89 IIMELYPYGELGHYLER--NKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYI  163 (281)
T ss_dssp             EEEECCTTCBHHHHHHH--HTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred             EEEecCCCCCHHHHHHh--ccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccc
Confidence            99999999999999953  2345889999999999999999999987   999999999999999999999999999877


Q ss_pred             CCC
Q 005825          661 GGD  663 (675)
Q Consensus       661 ~~~  663 (675)
                      ...
T Consensus       164 ~~~  166 (281)
T 3cc6_A          164 EDE  166 (281)
T ss_dssp             ---
T ss_pred             ccc
Confidence            543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.90  E-value=2.2e-23  Score=223.88  Aligned_cols=148  Identities=28%  Similarity=0.381  Sum_probs=124.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~------  577 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||++...  .....+.+.+|+.++++++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            478999999999999999999864 5889999999753  2234567889999999999999999999997665      


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      ..++||||+++ +|.+++.     ..+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|
T Consensus       104 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a  174 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  174 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred             ceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecc
Confidence            78999999975 6877773     24788999999999999999999997   999999999999999999999999999


Q ss_pred             eecCCC
Q 005825          658 RMFGGD  663 (675)
Q Consensus       658 ~~~~~~  663 (675)
                      +.....
T Consensus       175 ~~~~~~  180 (371)
T 2xrw_A          175 RTAGTS  180 (371)
T ss_dssp             ------
T ss_pred             cccccc
Confidence            877543

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.90  E-value=1.1e-23  Score=216.59  Aligned_cols=149  Identities=32%  Similarity=0.539  Sum_probs=125.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC-CeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ-GEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~-~~~~lV~Ey  585 (675)
                      .++|++.+.||+|+||.||+++. .++.||||.++..  ...+.+.+|+.++++++||||+++++++.+. +..++||||
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            46899999999999999999987 4889999999753  3557899999999999999999999997655 468999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +++++|.+++... ....+++..+..++.|++.||+|||+++   |+||||||+||++++++.+||+|||+++....
T Consensus        97 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  169 (278)
T 1byg_A           97 MAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  169 (278)
T ss_dssp             CTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             CCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence            9999999998532 1234788999999999999999999987   99999999999999999999999999987644

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.89  E-value=3.2e-23  Score=220.48  Aligned_cols=148  Identities=28%  Similarity=0.426  Sum_probs=130.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC-----CeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ-----GEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~-----~~~  579 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||+++... ......+.+|+.++++++||||+++++++...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            478999999999999999999875 58999999997532 23456788999999999999999999998764     678


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||++ ++|.+++..    ..+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.
T Consensus        90 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARI  161 (353)
T ss_dssp             EEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEecccccc
Confidence            99999997 689988843    45889999999999999999999987   99999999999999999999999999998


Q ss_pred             cCC
Q 005825          660 FGG  662 (675)
Q Consensus       660 ~~~  662 (675)
                      +..
T Consensus       162 ~~~  164 (353)
T 2b9h_A          162 IDE  164 (353)
T ss_dssp             CC-
T ss_pred             ccc
Confidence            754

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.89  E-value=5.6e-23  Score=213.74  Aligned_cols=148  Identities=24%  Similarity=0.339  Sum_probs=128.5

Q ss_pred             cCCccee-eeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHH-HhcCCCceeeEEEEEEe----CCeE
Q 005825          507 TENFSME-CKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLI-AKLQHRNLVRILGCCIE----QGEK  579 (675)
Q Consensus       507 ~~~f~~~-~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il-~~l~H~nIv~l~g~~~~----~~~~  579 (675)
                      .++|.+. +.||+|+||.||+++. .+++.||||+++.     ...+.+|+.++ +.++||||+++++++..    ....
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   90 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   90 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence            3677777 7799999999999987 4689999999964     25677888887 56689999999999987    6678


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEeeecc
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGL  656 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DFGl  656 (675)
                      ++||||+++++|.+++... ....+++..+..++.|++.||+|||+++   |+||||||+|||++.   ++.+||+|||+
T Consensus        91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~  166 (299)
T 3m2w_A           91 LIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  166 (299)
T ss_dssp             EEEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccc
Confidence            9999999999999999642 2346899999999999999999999987   999999999999998   78999999999


Q ss_pred             ceecCCC
Q 005825          657 ARMFGGD  663 (675)
Q Consensus       657 a~~~~~~  663 (675)
                      |+.+.+.
T Consensus       167 a~~~~~~  173 (299)
T 3m2w_A          167 AKETTGE  173 (299)
T ss_dssp             CEECTTC
T ss_pred             ccccccc
Confidence            9987543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.89  E-value=2.1e-23  Score=227.87  Aligned_cols=148  Identities=29%  Similarity=0.440  Sum_probs=122.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC----C--eEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ----G--EKI  580 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~----~--~~~  580 (675)
                      ..|++.++||+|+||.||+|+.. +++.||||++....    +.+.+|++++++++||||+++++++...    +  ..+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            46899999999999999999885 58999999987532    2234699999999999999999998642    2  367


Q ss_pred             EEEEecCCCCHHHHhcC-CCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC-CCeEEeeeccce
Q 005825          581 LILEYMPNKSLDVFLFD-PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLAR  658 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~-~~~kl~DFGla~  658 (675)
                      +||||+++ +|...+.. ......+++..+..++.||++||+|||+++   |+||||||+||||+.+ +.+||+|||+|+
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            99999986 55555432 123456899999999999999999999987   9999999999999965 568999999999


Q ss_pred             ecCCC
Q 005825          659 MFGGD  663 (675)
Q Consensus       659 ~~~~~  663 (675)
                      .+...
T Consensus       206 ~~~~~  210 (420)
T 1j1b_A          206 QLVRG  210 (420)
T ss_dssp             ECCTT
T ss_pred             hcccC
Confidence            87544

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.89  E-value=1.8e-23  Score=242.37  Aligned_cols=148  Identities=22%  Similarity=0.338  Sum_probs=128.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc--CCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe-----
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE-----  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~--~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~-----  578 (675)
                      .++|++.++||+|+||.||+++..  +++.||||++... .....+.+..|+.++++++||||+++++++.+.+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            378999999999999999999875  5899999998753 23345678999999999999999999999987665     


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .+|||||+++++|.+++..     .+++.+++.|+.||+.||.|||+++   |+||||||+|||++++ .+||+|||+++
T Consensus       159 ~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~  229 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVS  229 (681)
T ss_dssp             EEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             eEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccch
Confidence            7999999999999887632     5899999999999999999999998   9999999999999986 99999999999


Q ss_pred             ecCCC
Q 005825          659 MFGGD  663 (675)
Q Consensus       659 ~~~~~  663 (675)
                      .+...
T Consensus       230 ~~~~~  234 (681)
T 2pzi_A          230 RINSF  234 (681)
T ss_dssp             ETTCC
T ss_pred             hcccC
Confidence            87543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.89  E-value=1.3e-23  Score=217.03  Aligned_cols=153  Identities=28%  Similarity=0.367  Sum_probs=121.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc-c-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG-Q-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~-~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .++|++.++||+|+||.||+++. .+++.||||+++.... . ..+.+.++...++.++||||+++++++.+.+..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            47899999999999999999987 4689999999975422 2 2234455556688889999999999999999999999


Q ss_pred             EecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          584 EYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHY-SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||++ ++|.+++... .....+++..+..++.|++.||+|||++ +   |+||||||+|||++.++.+||+|||+|+.+.
T Consensus        86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            9998 4887776431 2345689999999999999999999997 7   9999999999999999999999999998775


Q ss_pred             CC
Q 005825          662 GD  663 (675)
Q Consensus       662 ~~  663 (675)
                      ..
T Consensus       162 ~~  163 (290)
T 3fme_A          162 DD  163 (290)
T ss_dssp             --
T ss_pred             cc
Confidence            44

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.89  E-value=1.1e-23  Score=225.73  Aligned_cols=148  Identities=31%  Similarity=0.413  Sum_probs=116.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC------C
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ------G  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~------~  577 (675)
                      .++|++.+.||+|+||.||+|+. .+++.||||++...  .....+++.+|+.+++.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            47899999999999999999986 46899999999753  223456788999999999999999999999754      5


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      ..++||||+ +++|.+++..    ..+++..+..++.||++||+|||+.+   |+||||||+|||+++++.+||+|||+|
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a  179 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLA  179 (367)
T ss_dssp             CCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC----
T ss_pred             eEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeecccc
Confidence            679999999 7899888742    45899999999999999999999987   999999999999999999999999999


Q ss_pred             eecCC
Q 005825          658 RMFGG  662 (675)
Q Consensus       658 ~~~~~  662 (675)
                      +....
T Consensus       180 ~~~~~  184 (367)
T 2fst_X          180 RHTAD  184 (367)
T ss_dssp             -----
T ss_pred             ccccc
Confidence            87653

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.89  E-value=1.8e-23  Score=216.01  Aligned_cols=151  Identities=32%  Similarity=0.452  Sum_probs=124.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc--CCc--EEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL--NGE--EVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~--~g~--~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .++|++.++||+|+||.||+|+..  +++  .||||.++..   .....+.+.+|+.++++++||||+++++++.+.. .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            468999999999999999999853  233  6899998754   2334678999999999999999999999998754 8


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++++|.+++...  ...+++..+..++.|++.||.|||+++   |+||||||+||+++.++.+||+|||+++.
T Consensus        96 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~  170 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRA  170 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             eeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccccc
Confidence            8999999999999998532  345889999999999999999999987   99999999999999999999999999998


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +...
T Consensus       171 ~~~~  174 (291)
T 1u46_A          171 LPQN  174 (291)
T ss_dssp             CCC-
T ss_pred             cccc
Confidence            7544

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.89  E-value=3.1e-23  Score=221.25  Aligned_cols=159  Identities=25%  Similarity=0.313  Sum_probs=120.6

Q ss_pred             HHHHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe--
Q 005825          502 SVAAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE--  578 (675)
Q Consensus       502 ~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~--  578 (675)
                      ......++|++.++||+|+||.||+|+.. +++.||||++... ......+..|+..++.++||||+++++++...+.  
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            34566789999999999999999999874 5899999998653 3334567788899999999999999999976443  


Q ss_pred             -----EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHH--hcCCCceEecCCCCCCEEEcC-CCCeE
Q 005825          579 -----KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH--HYSRFRIIHRDLKASNVLLDR-DMNPK  650 (675)
Q Consensus       579 -----~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH--~~~~~~iiHrDlkp~NILl~~-~~~~k  650 (675)
                           .++||||++++.+..+.........+++..+..++.|++.||.|||  +++   |+||||||+|||++. ++.+|
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~k  172 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLK  172 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEE
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEE
Confidence                 7899999987533322211134556888999999999999999999  776   999999999999997 89999


Q ss_pred             EeeeccceecCCCc
Q 005825          651 ISDFGLARMFGGDE  664 (675)
Q Consensus       651 l~DFGla~~~~~~~  664 (675)
                      |+|||+|+.+....
T Consensus       173 l~Dfg~a~~~~~~~  186 (360)
T 3e3p_A          173 LCDFGSAKKLSPSE  186 (360)
T ss_dssp             ECCCTTCBCCCTTS
T ss_pred             EeeCCCceecCCCC
Confidence            99999999876543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.89  E-value=1e-23  Score=224.70  Aligned_cols=147  Identities=16%  Similarity=0.262  Sum_probs=128.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC---------CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceee---------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN---------GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVR---------  568 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~---------  568 (675)
                      .++|++.+.||+|+||.||+|+...         ++.||||.+...     +.+.+|+.++++++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            4789999999999999999998753         789999998753     46889999999999999987         


Q ss_pred             ------EEEEEEe-CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCE
Q 005825          569 ------ILGCCIE-QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNV  641 (675)
Q Consensus       569 ------l~g~~~~-~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NI  641 (675)
                            +++++.. .+..++||||+ +++|.+++... ....+++.+++.|+.||+.||+|||+++   |+||||||+||
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NI  190 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENI  190 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGE
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHE
Confidence                  6788876 67889999999 99999999542 2356899999999999999999999997   99999999999


Q ss_pred             EEcCCC--CeEEeeeccceecCCC
Q 005825          642 LLDRDM--NPKISDFGLARMFGGD  663 (675)
Q Consensus       642 Ll~~~~--~~kl~DFGla~~~~~~  663 (675)
                      |++.++  .+||+|||+|+.+...
T Consensus       191 l~~~~~~~~~kl~Dfg~a~~~~~~  214 (352)
T 2jii_A          191 FVDPEDQSQVTLAGYGFAFRYCPS  214 (352)
T ss_dssp             EEETTEEEEEEECCGGGCBCSSGG
T ss_pred             EEcCCCCceEEEecCcceeeccCC
Confidence            999998  9999999999887543

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.89  E-value=5.1e-23  Score=212.58  Aligned_cols=154  Identities=27%  Similarity=0.466  Sum_probs=135.7

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ....++|++.++||+|+||.||+|+.. +++.||||++...  .....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY   97 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence            344578999999999999999999875 6899999998653  2345678999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC---CCeEEeeeccc
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD---MNPKISDFGLA  657 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~---~~~kl~DFGla  657 (675)
                      +||||+++++|.+++..   ...+++..+..++.||+.||.|||+++   |+||||||+||+++.+   +.+||+|||++
T Consensus        98 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~  171 (287)
T 2wei_A           98 IVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (287)
T ss_dssp             EEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred             EEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcc
Confidence            99999999999988843   346889999999999999999999987   9999999999999764   47999999999


Q ss_pred             eecCCC
Q 005825          658 RMFGGD  663 (675)
Q Consensus       658 ~~~~~~  663 (675)
                      +.+...
T Consensus       172 ~~~~~~  177 (287)
T 2wei_A          172 TCFQQN  177 (287)
T ss_dssp             GTBCCC
T ss_pred             eeecCC
Confidence            877543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.89  E-value=2.6e-23  Score=217.54  Aligned_cols=153  Identities=24%  Similarity=0.359  Sum_probs=131.5

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcC--CCceeeEEEEEEeCCeE
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQ--HRNLVRILGCCIEQGEK  579 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~--H~nIv~l~g~~~~~~~~  579 (675)
                      ....++|++.+.||+|+||.||+++..+++.||||.+....  ....+.+.+|+.++.+++  ||||+++++++.+.+..
T Consensus        24 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~  103 (313)
T 3cek_A           24 SVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI  103 (313)
T ss_dssp             EETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred             eeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence            34557899999999999999999998889999999987532  334578999999999997  59999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||| +.+++|.+++..   ...+++..+..++.||++||.|||+++   |+||||||+|||+++ +.+||+|||+++.
T Consensus       104 ~lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~  175 (313)
T 3cek_A          104 YMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQ  175 (313)
T ss_dssp             EEEEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred             EEEEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeecccccc
Confidence            99999 678999999853   346889999999999999999999987   999999999999975 8999999999998


Q ss_pred             cCCCc
Q 005825          660 FGGDE  664 (675)
Q Consensus       660 ~~~~~  664 (675)
                      +....
T Consensus       176 ~~~~~  180 (313)
T 3cek_A          176 MQPDT  180 (313)
T ss_dssp             -----
T ss_pred             ccCcc
Confidence            75443

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.89  E-value=6.7e-23  Score=212.10  Aligned_cols=151  Identities=24%  Similarity=0.404  Sum_probs=126.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEE-EeCCeEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC-IEQGEKILIL  583 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~-~~~~~~~lV~  583 (675)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++....  ..+++..|+.++.+++|++++..+..+ .+.+..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            457899999999999999999986 568999999876432  234688999999999988877666655 6677889999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE---cCCCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DFGla~~~  660 (675)
                      ||+ +++|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||+   ++++.+||+|||+|+.+
T Consensus        85 e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             ECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             Ecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence            999 99999998532  345899999999999999999999998   9999999999999   78999999999999988


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ....
T Consensus       159 ~~~~  162 (296)
T 4hgt_A          159 RDAR  162 (296)
T ss_dssp             BCTT
T ss_pred             cCcc
Confidence            6543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.89  E-value=2e-23  Score=224.15  Aligned_cols=151  Identities=14%  Similarity=0.161  Sum_probs=114.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc---cCHHHHHHHHHHHHhc--CCCceeeEE-------EEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKL--QHRNLVRIL-------GCC  573 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l--~H~nIv~l~-------g~~  573 (675)
                      ...|++.++||+|+||.||+|+.. +++.||||+++....   ...+.+++|+.++..+  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            346899999999999999999875 689999999986432   3355678885544444  699988865       454


Q ss_pred             EeC-----------------CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHH------HHHHHHHHHHHHHHHhcCCCc
Q 005825          574 IEQ-----------------GEKILILEYMPNKSLDVFLFDPTKKRLLGWQAR------IGIIEGIAQGLLYLHHYSRFR  630 (675)
Q Consensus       574 ~~~-----------------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~~L~yLH~~~~~~  630 (675)
                      ...                 ...++||||++ ++|.+++...  ...+.+..+      ..++.||+.||+|||+++   
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---  214 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQSKG---  214 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---
Confidence            433                 33799999999 8999999542  223455556      788899999999999998   


Q ss_pred             eEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          631 IIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       631 iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      |+||||||+|||+++++.+||+|||+|+..+..
T Consensus       215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~  247 (371)
T 3q60_A          215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR  247 (371)
T ss_dssp             EEETTCSGGGEEECTTSCEEECCGGGEEETTCE
T ss_pred             CccCcCCHHHEEECCCCCEEEEecceeeecCCC
Confidence            999999999999999999999999999987543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.89  E-value=5.5e-23  Score=216.09  Aligned_cols=152  Identities=28%  Similarity=0.479  Sum_probs=129.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE--cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhc---CCCceeeEEEEEE----
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL--LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKL---QHRNLVRILGCCI----  574 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l---~H~nIv~l~g~~~----  574 (675)
                      ..++|++.+.||+|+||.||+|+.  .+++.||||+++...  ......+.+|+.+++.+   +||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457899999999999999999987  358899999987432  22234677788777766   8999999999997    


Q ss_pred             -eCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEee
Q 005825          575 -EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISD  653 (675)
Q Consensus       575 -~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~D  653 (675)
                       .....++||||++ ++|.+++.... ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~D  163 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLAD  163 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECS
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEec
Confidence             4567899999998 69999985432 334889999999999999999999997   99999999999999999999999


Q ss_pred             eccceecCC
Q 005825          654 FGLARMFGG  662 (675)
Q Consensus       654 FGla~~~~~  662 (675)
                      ||+++.+..
T Consensus       164 fg~~~~~~~  172 (326)
T 1blx_A          164 FGLARIYSF  172 (326)
T ss_dssp             CCSCCCCCG
T ss_pred             CcccccccC
Confidence            999987753

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.89  E-value=1.3e-22  Score=210.00  Aligned_cols=151  Identities=24%  Similarity=0.405  Sum_probs=129.5

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEE-EeCCeEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCC-IEQGEKILIL  583 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~-~~~~~~~lV~  583 (675)
                      ..++|++.+.||+|+||.||+|+. .+++.||||++....  ..+++.+|+.++++++|++++..+..+ .+.+..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            357899999999999999999986 568999999987533  335789999999999988866655555 6677889999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE---cCCCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DFGla~~~  660 (675)
                      ||+ +++|.+++..  ....+++..+..++.||+.||+|||+++   |+||||||+|||+   ++++.+||+|||+|+.+
T Consensus        85 e~~-~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~  158 (296)
T 3uzp_A           85 ELL-GPSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             ECC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             Eec-CCCHHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence            999 9999999853  2345899999999999999999999997   9999999999999   58899999999999988


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ....
T Consensus       159 ~~~~  162 (296)
T 3uzp_A          159 RDAR  162 (296)
T ss_dssp             BCTT
T ss_pred             cccc
Confidence            6543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.89  E-value=2.7e-23  Score=217.23  Aligned_cols=155  Identities=26%  Similarity=0.414  Sum_probs=125.9

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc------cCHHHHHHHHHHHHhc----CCCceeeEEEE
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG------QGLEEFKNEMLLIAKL----QHRNLVRILGC  572 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~il~~l----~H~nIv~l~g~  572 (675)
                      ....++|++.++||+|+||.||+|+. .+++.||||+++....      .....+..|+.++.++    +||||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            34567899999999999999999986 4688999999975432      1234566799999998    89999999999


Q ss_pred             EEeCCeEEEEEEe-cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc-CCCCeE
Q 005825          573 CIEQGEKILILEY-MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD-RDMNPK  650 (675)
Q Consensus       573 ~~~~~~~~lV~Ey-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~-~~~~~k  650 (675)
                      +.+.+..++|||| +++++|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+||+++ +++.+|
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k  180 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAK  180 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEE
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEE
Confidence            9999999999999 899999999943   346899999999999999999999997   99999999999999 889999


Q ss_pred             EeeeccceecCCCc
Q 005825          651 ISDFGLARMFGGDE  664 (675)
Q Consensus       651 l~DFGla~~~~~~~  664 (675)
                      |+|||+++.+....
T Consensus       181 l~dfg~~~~~~~~~  194 (312)
T 2iwi_A          181 LIDFGSGALLHDEP  194 (312)
T ss_dssp             ECCCSSCEECCSSC
T ss_pred             EEEcchhhhcccCc
Confidence            99999999886543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.89  E-value=1.6e-22  Score=221.36  Aligned_cols=151  Identities=23%  Similarity=0.257  Sum_probs=130.3

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhc------CCCceeeEEEEEEeCCe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL------QHRNLVRILGCCIEQGE  578 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l------~H~nIv~l~g~~~~~~~  578 (675)
                      ...+|++.++||+|+||.||+|+.. +++.||||+++.. ....+.+..|+.++..+      .|+||+++++++...+.
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            3468999999999999999999875 4899999999753 33446778888888877      57799999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC--eEEeeecc
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN--PKISDFGL  656 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~--~kl~DFGl  656 (675)
                      .++||||++ ++|.+++... ....+++..+..|+.||+.||+|||+++   |+||||||+||||+.++.  +||+|||+
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~  248 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGS  248 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             EEEEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeeccc
Confidence            999999996 6898888543 2234899999999999999999999997   999999999999999887  99999999


Q ss_pred             ceecCC
Q 005825          657 ARMFGG  662 (675)
Q Consensus       657 a~~~~~  662 (675)
                      |+....
T Consensus       249 a~~~~~  254 (429)
T 3kvw_A          249 SCYEHQ  254 (429)
T ss_dssp             CEETTC
T ss_pred             ceecCC
Confidence            987643

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.89  E-value=3.2e-23  Score=225.30  Aligned_cols=149  Identities=27%  Similarity=0.454  Sum_probs=116.0

Q ss_pred             CCcce-eeeeCCcCceeEEEEEEc---CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEe--CCeEEE
Q 005825          508 ENFSM-ECKLGEGGFGPVYKGRLL---NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE--QGEKIL  581 (675)
Q Consensus       508 ~~f~~-~~~IG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~--~~~~~l  581 (675)
                      +.|.+ .++||+|+||.||+|+..   +++.||||++...  ...+.+.+|+.++++++||||+++++++..  ....++
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l   97 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL   97 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence            34555 458999999999999865   4789999999753  234578899999999999999999999965  668999


Q ss_pred             EEEecCCCCHHHHhcCC------CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE----cCCCCeEE
Q 005825          582 ILEYMPNKSLDVFLFDP------TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL----DRDMNPKI  651 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl----~~~~~~kl  651 (675)
                      ||||+++ +|.+++...      .....+++..+..|+.||+.||+|||+++   |+||||||+||||    +.++.+||
T Consensus        98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A           98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEE
Confidence            9999975 777766421      12235899999999999999999999998   9999999999999    77899999


Q ss_pred             eeeccceecCC
Q 005825          652 SDFGLARMFGG  662 (675)
Q Consensus       652 ~DFGla~~~~~  662 (675)
                      +|||+|+.+..
T Consensus       174 ~Dfg~a~~~~~  184 (405)
T 3rgf_A          174 ADMGFARLFNS  184 (405)
T ss_dssp             CCTTCCC----
T ss_pred             EECCCceecCC
Confidence            99999998754

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.88  E-value=7.8e-23  Score=214.92  Aligned_cols=154  Identities=23%  Similarity=0.369  Sum_probs=133.9

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCcc------CHHHHHHHHHHHHhcC--CCceeeEEEEEE
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQ------GLEEFKNEMLLIAKLQ--HRNLVRILGCCI  574 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~------~~~~f~~E~~il~~l~--H~nIv~l~g~~~  574 (675)
                      ....++|++.+.||+|+||.||+|+. .+++.||||.++.....      ..+.+..|+.++++++  ||||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            34567899999999999999999986 46899999999754221      2356788999999996  599999999999


Q ss_pred             eCCeEEEEEEecCC-CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc-CCCCeEEe
Q 005825          575 EQGEKILILEYMPN-KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD-RDMNPKIS  652 (675)
Q Consensus       575 ~~~~~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~-~~~~~kl~  652 (675)
                      +.+..++|||++.+ ++|.+++..   ...+++..+..++.||+.||+|||+++   |+||||||+|||++ +++.+||+
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~  192 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLI  192 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEEC
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEe
Confidence            99999999999986 999999843   456889999999999999999999987   99999999999999 78999999


Q ss_pred             eeccceecCCC
Q 005825          653 DFGLARMFGGD  663 (675)
Q Consensus       653 DFGla~~~~~~  663 (675)
                      |||+++.+...
T Consensus       193 Dfg~~~~~~~~  203 (320)
T 3a99_A          193 DFGSGALLKDT  203 (320)
T ss_dssp             CCTTCEECCSS
T ss_pred             eCccccccccc
Confidence            99999987644

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.88  E-value=9.1e-23  Score=220.25  Aligned_cols=135  Identities=25%  Similarity=0.324  Sum_probs=113.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC--------CCceeeEEEEEE---
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ--------HRNLVRILGCCI---  574 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~--------H~nIv~l~g~~~---  574 (675)
                      .++|++.++||+|+||.||+|+. .+++.||||+++.. ....+.+.+|+.++++++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            47899999999999999999986 45889999999753 334567889999999985        788999999997   


Q ss_pred             -eCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCCCCCEEEcCCC
Q 005825          575 -EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-SRFRIIHRDLKASNVLLDRDM  647 (675)
Q Consensus       575 -~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlkp~NILl~~~~  647 (675)
                       +....++||||+ +++|.+++... ....+++..+..|+.||+.||+|||++ +   |+||||||+|||++.++
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~  184 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNE  184 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCH
T ss_pred             CCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccc
Confidence             455789999999 55555555332 234589999999999999999999998 6   99999999999999775

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.88  E-value=1.5e-22  Score=224.33  Aligned_cols=150  Identities=25%  Similarity=0.397  Sum_probs=130.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCC-CceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH-RNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H-~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||.||+|+. .+++.||||++....  ..+++..|++++..++| ++|..+..++.+.+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            47899999999999999999986 568999999887532  23468899999999986 566677777788889999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE---cCCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---DRDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl---~~~~~~kl~DFGla~~~~  661 (675)
                      |+ +++|.+++...  ...+++.+++.|+.||+.||+|||+++   |+||||||+||||   ++++.+||+|||+|+.+.
T Consensus        84 ~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           84 LL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             CC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             CC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            99 99999998532  346899999999999999999999997   9999999999999   688999999999999886


Q ss_pred             CCc
Q 005825          662 GDE  664 (675)
Q Consensus       662 ~~~  664 (675)
                      ...
T Consensus       158 ~~~  160 (483)
T 3sv0_A          158 DTS  160 (483)
T ss_dssp             CTT
T ss_pred             CCc
Confidence            543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.88  E-value=6.4e-23  Score=220.21  Aligned_cols=149  Identities=27%  Similarity=0.436  Sum_probs=126.9

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE---
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK---  579 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~---  579 (675)
                      ..++|.+.+.||+|+||.||+|+.. +++.||||++....  ....+.+.+|+.++++++||||+++++++...+..   
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            3578999999999999999999864 58999999997542  22356788999999999999999999999877654   


Q ss_pred             ---EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecc
Q 005825          580 ---ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGL  656 (675)
Q Consensus       580 ---~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGl  656 (675)
                         ++||||++ ++|.+++.     ..+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+
T Consensus       120 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~  190 (371)
T 4exu_A          120 YDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGL  190 (371)
T ss_dssp             CCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred             eeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCc
Confidence               99999997 68888772     23889999999999999999999997   99999999999999999999999999


Q ss_pred             ceecCCC
Q 005825          657 ARMFGGD  663 (675)
Q Consensus       657 a~~~~~~  663 (675)
                      |+.....
T Consensus       191 a~~~~~~  197 (371)
T 4exu_A          191 ARHADAE  197 (371)
T ss_dssp             C------
T ss_pred             ccccccC
Confidence            9876543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.88  E-value=6.8e-23  Score=235.72  Aligned_cols=152  Identities=28%  Similarity=0.417  Sum_probs=132.1

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ..++|++.+.||+|+||.||+|+...    +..||||+++... ....+.|.+|+.++++++||||+++++++. .+..+
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~  466 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW  466 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence            45789999999999999999998742    4679999987543 234578999999999999999999999985 46689


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||+++|+|.+++...  ...+++..++.++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+.+
T Consensus       467 lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~  541 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM  541 (656)
T ss_dssp             EEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred             EEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeec
Confidence            999999999999999532  335889999999999999999999987   999999999999999999999999999987


Q ss_pred             CCC
Q 005825          661 GGD  663 (675)
Q Consensus       661 ~~~  663 (675)
                      ...
T Consensus       542 ~~~  544 (656)
T 2j0j_A          542 EDS  544 (656)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            544

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.88  E-value=2.2e-22  Score=212.16  Aligned_cols=150  Identities=23%  Similarity=0.328  Sum_probs=130.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE--cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCc------eeeEEEEEEeCCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL--LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN------LVRILGCCIEQGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~n------Iv~l~g~~~~~~~  578 (675)
                      .++|++.++||+|+||.||+|..  .+++.||||+++.. ....+.+.+|+.+++.++|++      ++++++++.+.+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            46899999999999999999986  35889999999753 334567889999999887654      9999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-------------
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-------------  645 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-------------  645 (675)
                      .++||||+ +++|.+++... ....+++..+..++.||+.||+|||+++   |+||||||+|||++.             
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~  166 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKR  166 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----C
T ss_pred             EEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccc
Confidence            99999999 89999998543 2235889999999999999999999997   999999999999987             


Q ss_pred             ------CCCeEEeeeccceecCC
Q 005825          646 ------DMNPKISDFGLARMFGG  662 (675)
Q Consensus       646 ------~~~~kl~DFGla~~~~~  662 (675)
                            ++.+||+|||+|+....
T Consensus       167 ~~~~~~~~~~kl~Dfg~~~~~~~  189 (339)
T 1z57_A          167 DERTLINPDIKVVDFGSATYDDE  189 (339)
T ss_dssp             EEEEESCCCEEECCCSSCEETTS
T ss_pred             ccccccCCCceEeeCcccccCcc
Confidence                  67899999999997654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.88  E-value=2.3e-23  Score=218.30  Aligned_cols=150  Identities=31%  Similarity=0.528  Sum_probs=128.5

Q ss_pred             HHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          504 AAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       504 ~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ....++|++.+.||+|+||.||+|+..+  .+|+|.++..  .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i  106 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI  106 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence            3346789999999999999999998753  5999998753  23345678899999999999999999999999999999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++++|.+++...  ...+++..+..++.||+.||+|||+++   |+||||||+|||++ ++.+||+|||+|+...
T Consensus       107 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~  180 (319)
T 2y4i_B          107 ITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISG  180 (319)
T ss_dssp             ECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred             EeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence            99999999999999542  346888999999999999999999997   99999999999998 6799999999988763

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.88  E-value=1e-22  Score=217.00  Aligned_cols=147  Identities=27%  Similarity=0.436  Sum_probs=127.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCe-----
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGE-----  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~-----  578 (675)
                      .++|.+.+.||+|+||.||+|+.. +|+.||||++....  ....+.+.+|+.++++++||||+++++++...+.     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            468999999999999999999874 58999999997532  2235678899999999999999999999987654     


Q ss_pred             -EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          579 -KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       579 -~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                       .++||||++ ++|.+++.     ..+++..+..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||++
T Consensus       103 ~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~  173 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA  173 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred             eEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccc
Confidence             499999997 58877762     24889999999999999999999997   999999999999999999999999999


Q ss_pred             eecCC
Q 005825          658 RMFGG  662 (675)
Q Consensus       658 ~~~~~  662 (675)
                      +....
T Consensus       174 ~~~~~  178 (353)
T 3coi_A          174 RHADA  178 (353)
T ss_dssp             TC---
T ss_pred             cCCCC
Confidence            87643

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.88  E-value=1.4e-22  Score=213.25  Aligned_cols=153  Identities=26%  Similarity=0.368  Sum_probs=126.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHH-HHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEML-LIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~-il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||+++... .....++..|+. +++.++||||+++++++.+.+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            368899999999999999999874 68999999997542 233445666665 777789999999999999999999999


Q ss_pred             EecCCCCHHHHhcCC--CCcccCCHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          584 EYMPNKSLDVFLFDP--TKKRLLGWQARIGIIEGIAQGLLYLHHY-SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      ||+++ +|.+++...  .....+++..+..++.|++.||.|||+. +   |+||||||+|||++.++.+||+|||+++.+
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            99985 777776421  1245688999999999999999999998 7   999999999999999999999999999877


Q ss_pred             CCC
Q 005825          661 GGD  663 (675)
Q Consensus       661 ~~~  663 (675)
                      ...
T Consensus       177 ~~~  179 (327)
T 3aln_A          177 VDS  179 (327)
T ss_dssp             ---
T ss_pred             ccc
Confidence            543

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.88  E-value=1.5e-22  Score=221.91  Aligned_cols=150  Identities=28%  Similarity=0.329  Sum_probs=121.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEEec
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      +.|...+.||+|+||+||.+...+|+.||||++...   ..+.+.+|+.++.++ +||||+++++++.+.+..++||||+
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~   91 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC   91 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence            455667889999999998776678999999998642   345678999999886 8999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcc----cCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCC-------------CCe
Q 005825          587 PNKSLDVFLFDPTKKR----LLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRD-------------MNP  649 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~-------------~~~  649 (675)
                      + |+|.+++.......    ...+..++.|+.||+.||+|||+++   |+||||||+|||++.+             +.+
T Consensus        92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~  167 (434)
T 2rio_A           92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRI  167 (434)
T ss_dssp             S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred             C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEE
Confidence            6 69999996432211    1123345789999999999999987   9999999999999754             489


Q ss_pred             EEeeeccceecCCCc
Q 005825          650 KISDFGLARMFGGDE  664 (675)
Q Consensus       650 kl~DFGla~~~~~~~  664 (675)
                      ||+|||+|+.+....
T Consensus       168 kL~DFG~a~~~~~~~  182 (434)
T 2rio_A          168 LISDFGLCKKLDSGQ  182 (434)
T ss_dssp             EECCCTTCEECCC--
T ss_pred             EEcccccceecCCCC
Confidence            999999999886543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.87  E-value=6.4e-22  Score=209.46  Aligned_cols=150  Identities=23%  Similarity=0.284  Sum_probs=121.9

Q ss_pred             hcCCcceee-eeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeE
Q 005825          506 ATENFSMEC-KLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE----QGEK  579 (675)
Q Consensus       506 ~~~~f~~~~-~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~----~~~~  579 (675)
                      ..++|.+.+ .||+|+||.||+|+.. +++.||||++...    .....+....+..+.||||+++++++..    ....
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            357899855 6999999999999875 5899999999652    1222223344567799999999999976    4458


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEeeecc
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGL  656 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DFGl  656 (675)
                      ++||||+++|+|.+++... ....+++.++..++.||+.||+|||+++   |+||||||+|||++.   ++.+||+|||+
T Consensus       102 ~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~  177 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGF  177 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecccc
Confidence            9999999999999999643 2346899999999999999999999997   999999999999976   45699999999


Q ss_pred             ceecCCC
Q 005825          657 ARMFGGD  663 (675)
Q Consensus       657 a~~~~~~  663 (675)
                      |+.....
T Consensus       178 ~~~~~~~  184 (336)
T 3fhr_A          178 AKETTQN  184 (336)
T ss_dssp             CEEC---
T ss_pred             ceecccc
Confidence            9877543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.87  E-value=1.7e-22  Score=221.33  Aligned_cols=148  Identities=24%  Similarity=0.380  Sum_probs=121.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ..+|...++||+|+||+|+.....+++.||||++....   ...+.+|+.+++++ +|||||++++++.+....++||||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~   99 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL   99 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence            35688999999999999766656689999999997532   23467899999999 799999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-----CCCeEEeeeccceec
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-----DMNPKISDFGLARMF  660 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-----~~~~kl~DFGla~~~  660 (675)
                      ++ |+|.+++....  ....+.....++.||+.||+|||+++   |+||||||+|||++.     ...+||+|||+|+.+
T Consensus       100 ~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A          100 CA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             CS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             CC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            96 59999986432  22344456789999999999999997   999999999999953     346889999999987


Q ss_pred             CCC
Q 005825          661 GGD  663 (675)
Q Consensus       661 ~~~  663 (675)
                      ...
T Consensus       174 ~~~  176 (432)
T 3p23_A          174 AVG  176 (432)
T ss_dssp             ---
T ss_pred             cCC
Confidence            543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.87  E-value=3.1e-22  Score=209.45  Aligned_cols=151  Identities=23%  Similarity=0.356  Sum_probs=116.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-c-CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-Q-GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-~-~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .++|++.+.||+|+||.||+|+.. +++.||||++..... . ..+.+.++..+++.++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~  103 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM  103 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence            468999999999999999999875 689999999975422 2 2234455556788889999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+ ++.+..+...  ....+++..+..++.|+++||.|||++ +   |+||||||+|||++.++.+||+|||+++.+..
T Consensus       104 e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A          104 ELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             CCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             ecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence            999 5555555422  234688999999999999999999985 6   99999999999999999999999999987644


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       178 ~  178 (318)
T 2dyl_A          178 D  178 (318)
T ss_dssp             -
T ss_pred             C
Confidence            3

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.87  E-value=7.4e-23  Score=232.38  Aligned_cols=154  Identities=30%  Similarity=0.394  Sum_probs=132.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe------CCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE------QGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~------~~~  578 (675)
                      .++|++.++||+|+||.||+|+. .+++.||||+++.. .....+.+.+|+.++++++||||+++++++..      .+.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            37899999999999999999987 45899999998754 33445679999999999999999999999765      667


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCC---eEEeeec
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMN---PKISDFG  655 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~---~kl~DFG  655 (675)
                      .++||||+++++|.+++........+++..+..|+.+++.||+|||+.+   |+||||||+|||++.++.   +||+|||
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEcccc
Confidence            8999999999999999976544456888999999999999999999987   999999999999997765   9999999


Q ss_pred             cceecCCC
Q 005825          656 LARMFGGD  663 (675)
Q Consensus       656 la~~~~~~  663 (675)
                      +|+.+...
T Consensus       170 ~a~~~~~~  177 (676)
T 3qa8_A          170 YAKELDQG  177 (676)
T ss_dssp             CCCBTTSC
T ss_pred             cccccccc
Confidence            99987544

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.87  E-value=1.3e-21  Score=210.78  Aligned_cols=154  Identities=25%  Similarity=0.344  Sum_probs=129.3

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CC-----ceeeEEEEEEeCCe
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HR-----NLVRILGCCIEQGE  578 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~-----nIv~l~g~~~~~~~  578 (675)
                      ..++|++.++||+|+||+||+|+.. +++.||||+++.. ....+++..|+.++..++ |+     +|+++++++...+.
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            4579999999999999999999875 5889999999753 334567888999988885 55     49999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc--CCCCeEEeeecc
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD--RDMNPKISDFGL  656 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~--~~~~~kl~DFGl  656 (675)
                      .++||||++ ++|.+++.... ...+++..+..++.|++.||.|||.+ ..+|+||||||+|||++  .++.+||+|||+
T Consensus       131 ~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~  207 (382)
T 2vx3_A          131 LCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS  207 (382)
T ss_dssp             EEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             eEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence            999999996 59999885432 24588999999999999999999952 22499999999999994  578899999999


Q ss_pred             ceecCCC
Q 005825          657 ARMFGGD  663 (675)
Q Consensus       657 a~~~~~~  663 (675)
                      |+.+...
T Consensus       208 a~~~~~~  214 (382)
T 2vx3_A          208 SCQLGQR  214 (382)
T ss_dssp             CEETTCC
T ss_pred             ceecccc
Confidence            9987543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.87  E-value=1.2e-21  Score=207.87  Aligned_cols=150  Identities=23%  Similarity=0.337  Sum_probs=127.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CC-cEEEEEEecCcCccCHHHHHHHHHHHHhcCCCc------eeeEEEEEEeCCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NG-EEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN------LVRILGCCIEQGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~n------Iv~l~g~~~~~~~  578 (675)
                      .++|++.+.||+|+||.||+|+.. ++ +.||||+++.. ....+.+..|+.++++++|++      ++.+++++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            478999999999999999999874 34 78999999753 344567889999999997766      9999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE---------------
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL---------------  643 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl---------------  643 (675)
                      .++||||+ +++|.+++... ....+++.++..++.||+.||+|||+++   |+||||||+|||+               
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~  171 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSC  171 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred             EEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccc
Confidence            99999999 56666666432 2245899999999999999999999987   9999999999999               


Q ss_pred             ----cCCCCeEEeeeccceecCC
Q 005825          644 ----DRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       644 ----~~~~~~kl~DFGla~~~~~  662 (675)
                          +.++.+||+|||+|+....
T Consensus       172 ~~~~~~~~~~kl~Dfg~~~~~~~  194 (355)
T 2eu9_A          172 EEKSVKNTSIRVADFGSATFDHE  194 (355)
T ss_dssp             CEEEESCCCEEECCCTTCEETTS
T ss_pred             cccccCCCcEEEeecCccccccc
Confidence                6788999999999997644

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.86  E-value=6.9e-22  Score=211.74  Aligned_cols=150  Identities=24%  Similarity=0.383  Sum_probs=128.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-----------CCceeeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-----------HRNLVRILGCCI  574 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-----------H~nIv~l~g~~~  574 (675)
                      .++|++.++||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++.+++           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            46899999999999999999986 46899999999752 334567889999999886           899999999998


Q ss_pred             eCC----eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCCCCCEEEc-----
Q 005825          575 EQG----EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-SRFRIIHRDLKASNVLLD-----  644 (675)
Q Consensus       575 ~~~----~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlkp~NILl~-----  644 (675)
                      ..+    ..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ +   |+||||||+|||++     
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~  171 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSP  171 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETT
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCC
Confidence            654    789999999 999999985422 34588999999999999999999997 7   99999999999994     


Q ss_pred             -CCCCeEEeeeccceecCC
Q 005825          645 -RDMNPKISDFGLARMFGG  662 (675)
Q Consensus       645 -~~~~~kl~DFGla~~~~~  662 (675)
                       ..+.+||+|||+|+.+..
T Consensus       172 ~~~~~~kl~Dfg~a~~~~~  190 (373)
T 1q8y_A          172 ENLIQIKIADLGNACWYDE  190 (373)
T ss_dssp             TTEEEEEECCCTTCEETTB
T ss_pred             cCcceEEEcccccccccCC
Confidence             445899999999998754

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.86  E-value=1.1e-21  Score=202.44  Aligned_cols=144  Identities=19%  Similarity=0.190  Sum_probs=115.8

Q ss_pred             HHHHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCc------------------cCHHHHHHHHHHHHhcCC
Q 005825          502 SVAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG------------------QGLEEFKNEMLLIAKLQH  563 (675)
Q Consensus       502 ~~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~------------------~~~~~f~~E~~il~~l~H  563 (675)
                      .+......|++.+.||+|+||.||+|+..+++.||||.++....                  .....+.+|+.++++++|
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~  163 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG  163 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence            44555677888899999999999999987799999999964321                  124568999999999995


Q ss_pred             CceeeEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE
Q 005825          564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL  643 (675)
Q Consensus       564 ~nIv~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl  643 (675)
                         +++.+++.. +..++||||+++++|.+ +..         .....++.|++.||.|||+++   |+||||||+|||+
T Consensus       164 ---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl  226 (282)
T 1zar_A          164 ---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLV  226 (282)
T ss_dssp             ---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEE
T ss_pred             ---CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEE
Confidence               444444433 45699999999999988 421         123469999999999999988   9999999999999


Q ss_pred             cCCCCeEEeeeccceecCCC
Q 005825          644 DRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       644 ~~~~~~kl~DFGla~~~~~~  663 (675)
                      + ++.+||+|||+|+.....
T Consensus       227 ~-~~~vkl~DFG~a~~~~~~  245 (282)
T 1zar_A          227 S-EEGIWIIDFPQSVEVGEE  245 (282)
T ss_dssp             E-TTEEEECCCTTCEETTST
T ss_pred             E-CCcEEEEECCCCeECCCC
Confidence            9 999999999999987543

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.86  E-value=3.5e-21  Score=166.80  Aligned_cols=104  Identities=16%  Similarity=0.398  Sum_probs=90.9

Q ss_pred             ccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCCC
Q 005825           27 DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTN  106 (675)
Q Consensus        27 ~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~g  106 (675)
                      ++|.+||.|.+||+|.|  |.|.|.|...++     |.++..   .++||+|||+.|..+ .+.|+|+.||+|||+|+++
T Consensus         2 n~L~~g~~L~~g~~L~s--g~y~l~~q~DgN-----Lvly~~---~~~vW~ant~~~~~~-~~~L~l~~dGnLvL~d~~~   70 (105)
T 4h3o_A            2 NILDNNEGLYAGQSLDV--EPYHFIMQDDCN-----LVLYDH---STSTWASNTEIGGKS-GCSAVLQSDGNFVVYDSSG   70 (105)
T ss_dssp             CEECTTEEECTTCEEEE--TTEEEEECTTSC-----EEEEET---TEEEEECCCCCTTCC-SCEEEECTTSCEEEECTTC
T ss_pred             CCcCCCCEEcCCCEEEE--CCEEEEECCCCe-----EEEEEC---CEEEEEecCCCCCCc-cEEEEEeCCccEEEECCCc
Confidence            68999999999999998  889999988876     566543   589999999999763 5789999999999999999


Q ss_pred             CeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeee
Q 005825          107 GTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQS  149 (675)
Q Consensus       107 ~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqS  149 (675)
                      .+||+|++.......+|+|+|+|||||++.        +||||
T Consensus        71 ~~vWss~t~~~~~~~~l~L~ddGNlVly~~--------~~W~S  105 (105)
T 4h3o_A           71 RSLWASHSTRGSGNYILILQDDGNVIIYGS--------DIWST  105 (105)
T ss_dssp             CEEEECCCCCCSSCEEEEECTTSCEEEEES--------EEEEC
T ss_pred             EEEEEecCCCCCCCEEEEEeCCCeEEEECC--------cEecC
Confidence            999999987655667899999999999973        59998

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.86  E-value=4.8e-22  Score=223.42  Aligned_cols=136  Identities=21%  Similarity=0.273  Sum_probs=109.1

Q ss_pred             eeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCcc--------CHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          512 MECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQ--------GLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       512 ~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~--------~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..++||+|+||.||+|+. .++.+++|+.......        ..+++.+|++++++++||||+++..++...++.+|||
T Consensus       340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            356899999999999954 5788999986542211        1345899999999999999996666666778889999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++++|.+++..           +..++.|+++||+|||+++   |+||||||+|||+++  .+||+|||+|+.+...
T Consensus       419 E~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          419 SYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             ECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred             ECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence            99999999999843           4579999999999999987   999999999999999  9999999999998664


Q ss_pred             c
Q 005825          664 E  664 (675)
Q Consensus       664 ~  664 (675)
                      +
T Consensus       483 ~  483 (540)
T 3en9_A          483 E  483 (540)
T ss_dssp             H
T ss_pred             c
Confidence            3

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.85  E-value=4.7e-21  Score=170.00  Aligned_cols=108  Identities=19%  Similarity=0.366  Sum_probs=94.6

Q ss_pred             cccccccCCCcCCCCCEEE--eCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEE
Q 005825           24 LAADTVTPASFIRDGEKLV--SSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVL  101 (675)
Q Consensus        24 ~~~~~i~~g~~l~~~~~l~--S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl  101 (675)
                      ++.++|++|++|.+|++|+  |++|.|+|+|+++|+     + +||++  +++||+|||+.|  +.++.|+|+.||||||
T Consensus         6 ~~~~~l~~g~~L~~g~~l~~~S~~g~~~L~~~~dgn-----l-vly~~--~~~vW~sn~~~~--~~~~~l~l~~dGNLVl   75 (119)
T 1b2p_A            6 SKQPDDNHPQILHATESLEILFGTHVYRFIMQTDCN-----L-VLYDN--NNPIWATNTGGL--GNGCRAVLQPDGVLVV   75 (119)
T ss_dssp             CSCSSSCCCCEEETTCEEEEEETTEEEEEEECTTSC-----E-EEEET--TEEEEECCCTTS--CSSCEEEECTTSCEEE
T ss_pred             ecCcccCCCCEEcCCCEEEEeCCCCCEEEEEecCCC-----E-EEEEC--CEEEEeCCCccC--CCceEEEEccCCEEEE
Confidence            5678999999999999999  999999999999875     2 58876  799999999877  3457899999999999


Q ss_pred             EeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeee
Q 005825          102 LNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQS  149 (675)
Q Consensus       102 ~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqS  149 (675)
                      +|.++.++|+|++....+...++|+|+|||||++.        ++|||
T Consensus        76 ~d~~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~~~--------~~W~S  115 (119)
T 1b2p_A           76 ITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYGD--------ALWAT  115 (119)
T ss_dssp             ECTTCCEEEECSCCCCSSCEEEEECTTSCEEEEES--------EEEEC
T ss_pred             EeCCCcEEEcCCCCCCCCCEEEEEECCCcEEEECc--------cEeCC
Confidence            99999999999987544566899999999999872        79998

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.85  E-value=9.5e-21  Score=165.83  Aligned_cols=110  Identities=24%  Similarity=0.433  Sum_probs=95.2

Q ss_pred             cccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCC
Q 005825           26 ADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQT  105 (675)
Q Consensus        26 ~~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~  105 (675)
                      +|+|.+|+.|.+|++|+ ++|.|+|+|+..|+     | |+|+  ..++||.||++.|.  .++.|+|..||||||+|.+
T Consensus         1 ~d~l~~g~~L~~g~~l~-~~~~~~l~~~~dGn-----l-vl~~--~~~~vW~sn~~~~~--~~~~l~l~~dGNLVl~~~~   69 (110)
T 3a0c_A            1 VNSLSSPNSLFTGHSLE-VGPSYRLIMQGDCN-----F-VLYD--SGKPVWASNTGGLG--SGCRLTLHNNGNLVIYDQS   69 (110)
T ss_dssp             CCEEETTCEECTTCEEE-ETTTEEEEECTTSC-----E-EEEE--TTEEEEECCCTTSC--SSCEEEECTTSCEEEECTT
T ss_pred             CCEeCCCCEECCCCEEE-ECCCEEEEEcCCCc-----E-EEEE--CCEEEEECCCCCCC--CcEEEEEeCCCCEEEECCC
Confidence            47899999999999999 99999999998876     2 6776  37899999998763  3578999999999999999


Q ss_pred             CCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCc
Q 005825          106 NGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPT  154 (675)
Q Consensus       106 g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~Pt  154 (675)
                      |.++|+|++....+...++|+|+|||||++      .  ++||||+||.
T Consensus        70 ~~~~W~S~t~~~~g~~~l~l~~dGnlvl~~------~--~~W~S~~~~~  110 (110)
T 3a0c_A           70 NRVIWQTKTNGKEDHYVLVLQQDRNVVIYG------P--VVWATGSGPA  110 (110)
T ss_dssp             CCEEEECCCCCSSSCCEEEECTTSCEEEEC------S--EEEECSCCC-
T ss_pred             CcEEEecCCCCCCCCEEEEEeCCccEEEEC------C--CEecCCCcCC
Confidence            999999998764455689999999999986      2  6999999984

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.83  E-value=3.7e-20  Score=163.61  Aligned_cols=110  Identities=18%  Similarity=0.360  Sum_probs=93.7

Q ss_pred             cccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCC
Q 005825           26 ADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQT  105 (675)
Q Consensus        26 ~~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~  105 (675)
                      .|+|.+||.|.+|++|+  +|.|+|+|+++|+   .   ++|+  ..++||+||++.|.  .++.|+|+.||+|||+|.+
T Consensus         2 ~dtl~~gq~L~~g~~L~--~g~~~L~~~~dgn---l---vly~--~~~~vW~sn~~~~~--~~~~l~l~~~GnLvl~d~~   69 (115)
T 2dpf_A            2 DNVLLSGQTLHADHSLQ--AGAYTLTIQNKCN---L---VKYQ--NGRQIWASNTDRRG--SGCRLTLLSDGNLVIYDHN   69 (115)
T ss_dssp             CCEEETTCEEETTEEEE--ETTEEEEECTTSC---E---EEEE--TTEEEEECSCTTSC--SSCEEEECTTSCEEEECTT
T ss_pred             CCEeCCCCEECCCCEEE--CCCEEEEEcCCCc---E---EEEe--CCEEEEeCCCCCCC--CceEEEECCCCcEEEECCC
Confidence            47899999999999998  8999999988775   2   2465  37899999999883  4578999999999999998


Q ss_pred             CCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCch
Q 005825          106 NGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTD  155 (675)
Q Consensus       106 g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtD  155 (675)
                      +.++|+|++.......+|+|+|+|||||++      .  ++||||.++..
T Consensus        70 ~~~vW~S~~~~~~g~~~l~l~~dGnlvl~~------~--~~W~S~~~~~~  111 (115)
T 2dpf_A           70 NNDVWGSACWGDNGKYALVLQKDGRFVIYG------P--VLWSLGPNGCR  111 (115)
T ss_dssp             CCEEEECCCCCSSSCCEEEECTTSCEEEEC------S--EEECSSTTCBC
T ss_pred             ceEEEEcCCCCCCCCEEEEEeCCCeEEEEC------C--CEEECCCCCCc
Confidence            999999998754456789999999999985      2  79999998764

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.82  E-value=2.4e-20  Score=203.04  Aligned_cols=152  Identities=18%  Similarity=0.252  Sum_probs=115.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcCC-Cce----------e----
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQH-RNL----------V----  567 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~H-~nI----------v----  567 (675)
                      ...|...++||+|+||.||+|+. .+++.||||+++...   ....+.|++|+.+++.++| +|.          +    
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            35678889999999999999986 468999999988432   2346789999999999987 221          1    


Q ss_pred             -------eEEEEEEe-----CCeEEEEEEecCCCCHHHHhcC----CCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCce
Q 005825          568 -------RILGCCIE-----QGEKILILEYMPNKSLDVFLFD----PTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRI  631 (675)
Q Consensus       568 -------~l~g~~~~-----~~~~~lV~Ey~~~gsL~~~l~~----~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i  631 (675)
                             .+..++..     ....+++|+++ +++|.+++..    ......+++..++.|+.||++||+|||+++   |
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i  232 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L  232 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence                   11111111     12356667654 7899988831    123456788899999999999999999987   9


Q ss_pred             EecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          632 IHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       632 iHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      +||||||+||||+.++.+||+|||+|+..+.
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~  263 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA  263 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTE
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCC
Confidence            9999999999999999999999999987643

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.81  E-value=8.6e-20  Score=160.53  Aligned_cols=110  Identities=23%  Similarity=0.466  Sum_probs=93.6

Q ss_pred             cccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCC
Q 005825           26 ADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQT  105 (675)
Q Consensus        26 ~~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~  105 (675)
                      +|+|.+||.|.+|++|  ++|.|+|+|+++|+     | ++|+.  .++||+||++.+  +.++.|.|..||||||+| +
T Consensus         1 tdtl~~gq~L~~g~~L--~~~~~~L~~~~dgn-----l-vl~~~--~~~vW~sn~~~~--~~~~~l~l~~~GNLvl~d-~   67 (112)
T 1xd5_A            1 SDRLNSGHQLDTGGSL--AEGGYLFIIQNDCN-----L-VLYDN--NRAVWASGTNGK--ASGCVLKMQNDGNLVIYS-G   67 (112)
T ss_dssp             CCEEETTEEECTTCEE--EETTEEEEECTTSC-----E-EEEET--TEEEEECCCTTS--CSSEEEEECTTSCEEEEE-T
T ss_pred             CCCCCCCCEECCCCEE--eCCCEEEEEcCCCc-----E-EEEEC--CEEEEeCCCcCC--CCCEEEEEeCCCCEEEEc-C
Confidence            4899999999999999  58999999999886     2 46765  689999999754  345789999999999999 8


Q ss_pred             CCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCC
Q 005825          106 NGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYP  153 (675)
Q Consensus       106 g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~P  153 (675)
                      +.++|+|++.......+++|+++|||||++.     .+.++||||++.
T Consensus        68 ~~~~W~S~~~~~~g~~~l~l~~dGnlvl~~~-----~~~~~W~S~~~~  110 (112)
T 1xd5_A           68 SRAIWASNTNRQNGNYYLILQRDRNVVIYDN-----SNNAIWATHTNV  110 (112)
T ss_dssp             TEEEEECCCCCSCCCCEEEECTTSCEEEECT-----TSCEEEECCCCC
T ss_pred             CEEEEECCccCCCCCEEEEEeCCCcEEEECC-----CCceEEECCCcc
Confidence            8899999876544567899999999999974     457999999985

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.80  E-value=1.1e-19  Score=184.79  Aligned_cols=141  Identities=16%  Similarity=0.182  Sum_probs=109.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcE--EEEEEecCcCcc------------------------CHHHHHHHHHHHHh
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEE--VAVKRLSSQSGQ------------------------GLEEFKNEMLLIAK  560 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~--vAvK~l~~~~~~------------------------~~~~f~~E~~il~~  560 (675)
                      .-|++.+.||+|+||.||+|+. .+|+.  ||||+++.....                        ....+..|+.++.+
T Consensus        47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            3467889999999999999987 78888  999987542111                        01368899999999


Q ss_pred             cCCCce--eeEEEEEEeCCeEEEEEEecCC-C----CHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHH-hcCCCceE
Q 005825          561 LQHRNL--VRILGCCIEQGEKILILEYMPN-K----SLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH-HYSRFRII  632 (675)
Q Consensus       561 l~H~nI--v~l~g~~~~~~~~~lV~Ey~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ii  632 (675)
                      ++|+++  ..++..    +..+|||||+.+ |    +|.++...      .++.....++.|++.||.||| +.+   |+
T Consensus       127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~g---iv  193 (258)
T 1zth_A          127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEAE---LV  193 (258)
T ss_dssp             HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTSC---EE
T ss_pred             HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHCC---EE
Confidence            988754  444443    356899999942 4    67666521      123456789999999999999 777   99


Q ss_pred             ecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          633 HRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       633 HrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||||||+|||+++  .+||+|||+|.....+
T Consensus       194 HrDlkp~NILl~~--~~~liDFG~a~~~~~~  222 (258)
T 1zth_A          194 HADLSEYNIMYID--KVYFIDMGQAVTLRHP  222 (258)
T ss_dssp             CSSCSTTSEEESS--SEEECCCTTCEETTST
T ss_pred             eCCCCHHHEEEcC--cEEEEECcccccCCCc
Confidence            9999999999998  9999999999987544

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.77  E-value=1.4e-18  Score=151.85  Aligned_cols=103  Identities=24%  Similarity=0.437  Sum_probs=87.3

Q ss_pred             ccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCCC
Q 005825           27 DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTN  106 (675)
Q Consensus        27 ~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~g  106 (675)
                      ++|.+||.|.+|+.|+  +|.|+|.|+..|+   .+   .|..  .++||++|++.+  +.++.|.|..||+|||+|.++
T Consensus         2 ntL~~gq~L~~g~~L~--~g~~~L~~q~dGn---Lv---ly~~--~~~vW~snt~~~--~~~~~l~l~~dGNLvl~~~~~   69 (109)
T 3dzw_A            2 NILYSGETLSPGEFLN--NGRYVFIMQEDCN---LV---LYDV--DKPIWATNTGGL--DRRCHLSMQSDGNLVVYSPRN   69 (109)
T ss_dssp             CEEETTEEECTTCEEE--ETTEEEEECTTSC---EE---EEET--TEEEEECCCTTS--SSSCEEEECTTSCEEEECTTS
T ss_pred             CCcCCCCEeCCCCEEE--CCCEEEEEcCCCc---EE---EEeC--CEEEEECCcccC--CCCEEEEEeCCCCEEEECCCC
Confidence            5899999999999997  7999999998875   22   2654  689999999876  345789999999999999999


Q ss_pred             CeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeee
Q 005825          107 GTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQS  149 (675)
Q Consensus       107 ~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqS  149 (675)
                      .++|++++.+.....+|+|+|+|||||++.        ++|||
T Consensus        70 ~~~W~S~t~~~~~~~~~~L~ddGNlvly~~--------~~W~s  104 (109)
T 3dzw_A           70 NPIWASNTGGENGNYVCVLQKDRNVVIYGT--------ARWAT  104 (109)
T ss_dssp             CEEEECCCCCSSSCEEEEECTTSCEEEEES--------CCCCC
T ss_pred             CEEEECCCCCCCCCEEEEEeCCCEEEEECC--------CEEeC
Confidence            999999987544456899999999999973        69998

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.71  E-value=2.9e-17  Score=143.47  Aligned_cols=105  Identities=20%  Similarity=0.354  Sum_probs=85.9

Q ss_pred             cccccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEe
Q 005825           24 LAADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLN  103 (675)
Q Consensus        24 ~~~~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~  103 (675)
                      .+.|+|.+||.|.+|+.|+|.  .|.|-|...|+     |.+ |..   ++||.+|++..  +.++.|.|+.||+|||+|
T Consensus         4 ~~~dtL~~gq~L~~g~~L~sg--~~~L~~q~dGn-----Lvl-~~~---~~vW~snt~~~--~~~~~l~l~~dGNLvl~d   70 (110)
T 3r0e_B            4 FTNNLLFSGQVLYGDGRLTAK--NHQLVMQGDCN-----LVL-YGG---KYGWQSNTHGN--GEHCFLRLNHKGELIIKD   70 (110)
T ss_dssp             CBTTEEETTCEEETTEEEECS--SCEEEECTTSC-----EEE-ECS---SSCEECCCTTS--SSSCEEEECTTSCEEEEC
T ss_pred             cccCEECCCCEecCCCEEEeC--CEEEEEcCCCe-----EEE-ECC---eEEEECCCcCC--CcCEEEEEeCCCcEEEEe
Confidence            367999999999999999984  58987766554     444 654   58999999863  345789999999999999


Q ss_pred             CCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeee
Q 005825          104 QTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQS  149 (675)
Q Consensus       104 ~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqS  149 (675)
                      .++.++|++++.......+|+|+|+|||||++.        ++|+|
T Consensus        71 ~~~~~iW~S~t~~~~~~~~~~L~~dGNlvly~~--------~~W~t  108 (110)
T 3r0e_B           71 DDFKTIWSSRSSSKQGEYVLILQDDGFGVIYGP--------AIFET  108 (110)
T ss_dssp             TTCCEEEECCCCCSSSCCEEEECTTSCEEEECS--------EEEES
T ss_pred             CCCCEEEEcCCcCCCCCEEEEEcCCccEEEecC--------CEecC
Confidence            999999999986544457899999999999972        69987

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.69  E-value=1.8e-16  Score=139.29  Aligned_cols=107  Identities=14%  Similarity=0.293  Sum_probs=88.6

Q ss_pred             ccccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeC
Q 005825           25 AADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQ  104 (675)
Q Consensus        25 ~~~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~  104 (675)
                      +.++|.+||.|.+|+.|.+  |.|.|-|...|+     |.++. .-..++||.+|+..+-  .++.|.|..||+|||+|.
T Consensus         5 ~~~tL~~gq~L~~g~~L~~--g~~~L~~q~dGN-----LvL~~-~~~~~~vWssnt~~~~--~~~~l~l~~dGNLVl~d~   74 (113)
T 3mez_B            5 VRNVLFSSQVMYDNAQLAT--RDYSLVMRDDCN-----LVLTK-GSKTNIVWESGTSGRG--QHCFMRLGHSGELDITDD   74 (113)
T ss_dssp             CSSEEETTCEEETTCEEEE--TTEEEEECTTSC-----EEEEE-TTTTEEEEECCCTTSC--SSCEEEECTTSCEEEECT
T ss_pred             cCCEeCCCCEECCCCEeEc--CCEEEEEcCCCE-----EEEEE-CCCCEEEEECCcccCC--cCEEEEEeCCCcEEEECC
Confidence            5689999999999999975  889999987775     55543 2136899999998662  357899999999999999


Q ss_pred             CCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeee
Q 005825          105 TNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQS  149 (675)
Q Consensus       105 ~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqS  149 (675)
                      ++.++|++++.......+|+|+|+|||||++        ..||+|
T Consensus        75 ~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~--------~~~W~s  111 (113)
T 3mez_B           75 RLNTVFVSNTVGQEGDYVLILQINGQAVVYG--------PAVWST  111 (113)
T ss_dssp             TSCEEEECSCCCSSSCCEEEECTTSCEEEEC--------SEEEES
T ss_pred             CCCEEEECCCcCCCCCEEEEEcCCceEEEec--------CCEecC
Confidence            9999999998654445789999999999996        369997

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.69  E-value=1e-16  Score=140.79  Aligned_cols=97  Identities=22%  Similarity=0.403  Sum_probs=79.2

Q ss_pred             CCCCCCcceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccc
Q 005825           82 RPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDM  161 (675)
Q Consensus        82 ~pv~~~~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~  161 (675)
                      .|+.+...+|.|+.||+|+|++. +++||++++.......+|+|+|+|||||++ +     +.++||||+          
T Consensus        14 ~~L~~~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d-~-----~~~~W~S~~----------   76 (112)
T 1xd5_A           14 GSLAEGGYLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS-G-----SRAIWASNT----------   76 (112)
T ss_dssp             CEEEETTEEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE-T-----TEEEEECCC----------
T ss_pred             CEEeCCCEEEEEcCCCcEEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc-C-----CEEEEECCc----------
Confidence            34445567899999999999987 789999998754445789999999999998 3     469999994          


Q ss_pred             cccccccCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEc-CCeeeeeeCccCC
Q 005825          162 KMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFN-GSVKYTCTGEWTG  218 (675)
Q Consensus       162 ~l~~~~~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~-~~~~y~~~g~w~~  218 (675)
                                           +|++|.|++.++++|+  ++++. ...+||++++|+|
T Consensus        77 ---------------------~~~~g~~~l~l~~dGn--lvl~~~~~~~~W~S~~~~g  111 (112)
T 1xd5_A           77 ---------------------NRQNGNYYLILQRDRN--VVIYDNSNNAIWATHTNVG  111 (112)
T ss_dssp             ---------------------CCSCCCCEEEECTTSC--EEEECTTSCEEEECCCCCC
T ss_pred             ---------------------cCCCCCEEEEEeCCCc--EEEECCCCceEEECCCccC
Confidence                                 4456889999999998  45555 4679999999986

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.67  E-value=4.1e-16  Score=136.26  Aligned_cols=89  Identities=19%  Similarity=0.340  Sum_probs=74.4

Q ss_pred             CcceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhcccccccc
Q 005825           87 HNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWD  166 (675)
Q Consensus        87 ~~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~  166 (675)
                      ...+|.|+.||+|||++ .+++||++++.......+|+|+|+|||||++.     .+.+|||||                
T Consensus        20 ~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~-----~~~~~W~S~----------------   77 (110)
T 3a0c_A           20 PSYRLIMQGDCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQ-----SNRVIWQTK----------------   77 (110)
T ss_dssp             TTEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECT-----TCCEEEECC----------------
T ss_pred             CCEEEEEcCCCcEEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEECC-----CCcEEEecC----------------
Confidence            45789999999999999 58999999987544467899999999999985     467999999                


Q ss_pred             ccCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCcc
Q 005825          167 LKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEW  216 (675)
Q Consensus       167 ~~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~w  216 (675)
                                     +++++|.|+++++++|+  ++++++  .||+++++
T Consensus        78 ---------------t~~~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~  108 (110)
T 3a0c_A           78 ---------------TNGKEDHYVLVLQQDRN--VVIYGP--VVWATGSG  108 (110)
T ss_dssp             ---------------CCCSSSCCEEEECTTSC--EEEECS--EEEECSCC
T ss_pred             ---------------CCCCCCCEEEEEeCCcc--EEEECC--CEecCCCc
Confidence                           24567899999999998  555665  79999875

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.66  E-value=4.3e-17  Score=173.01  Aligned_cols=143  Identities=13%  Similarity=0.162  Sum_probs=103.0

Q ss_pred             HHHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCc--------------cCHHH--------HHHHHHHHHh
Q 005825          503 VAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG--------------QGLEE--------FKNEMLLIAK  560 (675)
Q Consensus       503 ~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~--------------~~~~~--------f~~E~~il~~  560 (675)
                      +.....-|++.++||+|+||.||+|...+|+.||||+++....              .....        ...|...|.+
T Consensus        90 L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r  169 (397)
T 4gyi_A           90 HAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA  169 (397)
T ss_dssp             HHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence            3344445999999999999999999998999999998763210              00111        1245666666


Q ss_pred             cCCCcee--eEEEEEEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCC
Q 005825          561 LQHRNLV--RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKA  638 (675)
Q Consensus       561 l~H~nIv--~l~g~~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp  638 (675)
                      +++.++.  ..+..  .  ..+|||||++++.|..+...         .....++.|++.+|.|||+.+   ||||||||
T Consensus       170 L~~~gv~vp~p~~~--~--~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp  233 (397)
T 4gyi_A          170 LYEEGFPVPEPIAQ--S--RHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKHG---LIHGDFNE  233 (397)
T ss_dssp             HHHTTCSCCCEEEE--E--TTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHTT---EECSCCST
T ss_pred             HHhcCCCCCeeeec--c--CceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCH
Confidence            6544432  22222  1  23799999999988654411         123467889999999999987   99999999


Q ss_pred             CCEEEcCCC----------CeEEeeeccceecC
Q 005825          639 SNVLLDRDM----------NPKISDFGLARMFG  661 (675)
Q Consensus       639 ~NILl~~~~----------~~kl~DFGla~~~~  661 (675)
                      .|||+++++          .+.|+||+-+....
T Consensus       234 ~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          234 FNILIREEKDAEDPSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             TSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred             HHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence            999998877          38999999887654

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.64  E-value=7.6e-16  Score=134.20  Aligned_cols=102  Identities=22%  Similarity=0.392  Sum_probs=84.9

Q ss_pred             ccccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeC
Q 005825           25 AADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQ  104 (675)
Q Consensus        25 ~~~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~  104 (675)
                      |.|+|.+||.|..|+.|  .+|.|.|.|...|+     | +.|..     +|.+|+..+  +.++.|+|+.||+|||+|.
T Consensus         2 ~~dtL~~gq~L~~g~~L--~~g~~~L~~q~dGN-----L-vl~~~-----~Wssnt~~~--~~~~~l~l~~dGnLvl~d~   66 (109)
T 3r0e_A            2 GTNYLLSGQTLDTEGHL--KNGDFDLVMQDDCN-----L-VLYNG-----NWQSNTANN--GRDCKLTLTDYGELVIKNG   66 (109)
T ss_dssp             CCSEEETTCEECTTCEE--EETTEEEEECTTSC-----E-EEETT-----TEECCCTTS--CSSCEEEECTTSCEEEECT
T ss_pred             ccCCcCCCCCcCCCCEe--ECCCEEEEEecCCe-----E-EEEeC-----eEEcCCCCC--CCcEEEEEcCCCeEEEEeC
Confidence            57899999999999999  57999999987775     2 22432     799998765  2357899999999999999


Q ss_pred             CCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeee
Q 005825          105 TNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQS  149 (675)
Q Consensus       105 ~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqS  149 (675)
                      ++.++|++++.+.....+|+|+|+|||||++        .++|+|
T Consensus        67 ~~~~vWss~t~~~~~~~~~~L~~dGNlvly~--------~~~W~s  103 (109)
T 3r0e_A           67 DGSTVWKSGAQSVKGNYAAVVHPDGRLVVFG--------PSVFKI  103 (109)
T ss_dssp             TSCEEEECCCCCSSSCCEEEEETTTEEEEEC--------SEEEEE
T ss_pred             CCCEEEcCCCcCCCcCEEEEEcCCCeEEEEe--------cCEECC
Confidence            9999999998654445689999999999996        369997

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.62  E-value=2.1e-15  Score=133.55  Aligned_cols=87  Identities=24%  Similarity=0.313  Sum_probs=72.7

Q ss_pred             cceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccccccccc
Q 005825           88 NAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDL  167 (675)
Q Consensus        88 ~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~  167 (675)
                      ..+|.|+.||+|||++. +++||++|+........|+|+|+|||||+|.     .+.+|||||                 
T Consensus        31 ~~~L~~~~dgnlvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~-----~~~~lW~S~-----------------   87 (119)
T 1b2p_A           31 VYRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITN-----ENVTVWQSP-----------------   87 (119)
T ss_dssp             EEEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECT-----TCCEEEECS-----------------
T ss_pred             CEEEEEecCCCEEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEeC-----CCcEEEcCC-----------------
Confidence            35799999999999987 8999999987544457899999999999985     467999999                 


Q ss_pred             cCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCc
Q 005825          168 KNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGE  215 (675)
Q Consensus       168 ~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~  215 (675)
                                    ++|++|.|++.++++|+  +++++  ..||++|+
T Consensus        88 --------------~~~~~g~~~l~l~~~Gn--lvl~~--~~~W~Sg~  117 (119)
T 1b2p_A           88 --------------VAGKAGHYVLVLQPDRN--VVIYG--DALWATQT  117 (119)
T ss_dssp             --------------CCCCSSCEEEEECTTSC--EEEEE--SEEEECCC
T ss_pred             --------------CCCCCCCEEEEEECCCc--EEEEC--ccEeCCCC
Confidence                          35567899999999998  45555  38999886

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.61  E-value=3.1e-15  Score=131.87  Aligned_cols=91  Identities=26%  Similarity=0.342  Sum_probs=75.6

Q ss_pred             cceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccccccccc
Q 005825           88 NAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDL  167 (675)
Q Consensus        88 ~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~  167 (675)
                      ..+|.|+.||+|+|++ .+++||++++........++|+|+|||||+|.     .+.++||||++|              
T Consensus        21 ~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~-----~~~~vW~S~~~~--------------   80 (115)
T 2dpf_A           21 AYTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDH-----NNNDVWGSACWG--------------   80 (115)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEECT-----TCCEEEECCCCC--------------
T ss_pred             CEEEEEcCCCcEEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEECC-----CceEEEEcCCCC--------------
Confidence            4679999999999998 57899999987544457899999999999985     457999999982              


Q ss_pred             cCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCccCCC
Q 005825          168 KNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGD  219 (675)
Q Consensus       168 ~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~w~~~  219 (675)
                                       ++|.|++.++++|+  +++++.  .||++++|...
T Consensus        81 -----------------~~g~~~l~l~~dGn--lvl~~~--~~W~S~~~~~~  111 (115)
T 2dpf_A           81 -----------------DNGKYALVLQKDGR--FVIYGP--VLWSLGPNGCR  111 (115)
T ss_dssp             -----------------SSSCCEEEECTTSC--EEEECS--EEECSSTTCBC
T ss_pred             -----------------CCCCEEEEEeCCCe--EEEECC--CEEECCCCCCc
Confidence                             45789999999998  555654  89999999653

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.50  E-value=8.9e-14  Score=121.47  Aligned_cols=103  Identities=17%  Similarity=0.271  Sum_probs=82.4

Q ss_pred             cccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCC
Q 005825           26 ADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQT  105 (675)
Q Consensus        26 ~~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~  105 (675)
                      .++|.+||.|.+|+.|  .+|.|.|-|...|+     |.+ |..  .. ||.+|+..+.  ..+.|.|..||+|||+|.+
T Consensus         2 ~~~l~~gq~L~~g~~L--~~g~~~L~~q~dGn-----Lvl-~~~--~~-vW~snt~~~~--~~~~l~l~~dGNLVl~~~~   68 (111)
T 3mez_A            2 NNVLLTGDVIHTDNQL--SYESAAFVMQGDCN-----LVL-YNE--AG-GFQSNTHGRG--VDCTLRLNNRGQLEIHSAN   68 (111)
T ss_dssp             TTEEETTCEECTTCEE--EETTEEEEECTTSC-----EEE-ECS--SC-CEECCCTTSC--SSCEEEECTTSCEEEECSS
T ss_pred             cCEeCCCCEeCCCCEE--ecCCEEEEEccCCe-----EEE-ECC--CC-EEECCcccCC--cCEEEEEcCCCcEEEEeCC
Confidence            4789999999999999  47899999987775     333 532  34 9999998762  3578999999999999998


Q ss_pred             CC-eEEEeccCC--CCCCceEEEccCCCEEEEeCCCCCCCcceeeee
Q 005825          106 NG-TIWSTNASS--EAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQS  149 (675)
Q Consensus       106 g~-~vWss~~~~--~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqS  149 (675)
                      +. ++|++++..  .....+++|+|+|||||++        .++|+|
T Consensus        69 ~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~--------~~~W~s  107 (111)
T 3mez_A           69 SNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG--------PAIWST  107 (111)
T ss_dssp             CSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC--------SEEEEC
T ss_pred             CCEEEEEeccccCCCCcCEEEEECCCCeEEEec--------cCEEcc
Confidence            76 599999642  2345689999999999996        369987

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.38  E-value=2e-12  Score=113.28  Aligned_cols=96  Identities=18%  Similarity=0.276  Sum_probs=74.0

Q ss_pred             CCCCCCCCcceEEEeeCCeEEEEeC-CCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhh
Q 005825           80 RDRPISDHNAVLTISNNGKLVLLNQ-TNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLL  158 (675)
Q Consensus        80 r~~pv~~~~~~l~l~~~G~Lvl~~~-~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlL  158 (675)
                      .+.|+.+...+|.++.||+|||++. .+.++|++++.....+..++|+|+|||||++.     .+.++|||=.+      
T Consensus        17 ~g~~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~-----~~~~iW~S~t~------   85 (113)
T 3mez_B           17 DNAQLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDD-----RLNTVFVSNTV------   85 (113)
T ss_dssp             TTCEEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECT-----TSCEEEECSCC------
T ss_pred             CCCEeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECC-----CCCEEEECCCc------
Confidence            3556665667999999999999998 48999999987544457899999999999985     45789997211      


Q ss_pred             ccccccccccCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCc
Q 005825          159 QDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGE  215 (675)
Q Consensus       159 pg~~l~~~~~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~  215 (675)
                                               ...|.|.+.++.+|+..++  +  .+.|.+|+
T Consensus        86 -------------------------~~~~~~~~~L~~dGnlvly--~--~~~W~s~~  113 (113)
T 3mez_B           86 -------------------------GQEGDYVLILQINGQAVVY--G--PAVWSTAA  113 (113)
T ss_dssp             -------------------------CSSSCCEEEECTTSCEEEE--C--SEEEESCC
T ss_pred             -------------------------CCCCCEEEEEcCCceEEEe--c--CCEecCCC
Confidence                                     0124589999999996655  4  57898774

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.38  E-value=3e-12  Score=129.77  Aligned_cols=146  Identities=18%  Similarity=0.096  Sum_probs=116.4

Q ss_pred             HhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEE
Q 005825          505 AATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       505 ~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .....|++...++.|+.+.||+.... ++.+++|+...........+..|+.+++.+. |..+.++++++.+.+..++||
T Consensus        11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~   89 (263)
T 3tm0_A           11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM   89 (263)
T ss_dssp             HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred             HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence            34467888888999999999999754 6889999987532233456889999999985 678889999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-------------------------------------  626 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------------------------------------  626 (675)
                      ||++|.+|.+.+..        ......++.+++++|+.||+.                                     
T Consensus        90 e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (263)
T 3tm0_A           90 SEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED  161 (263)
T ss_dssp             ECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred             EecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence            99999999876411        112346788999999999981                                     


Q ss_pred             -------------------CCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          627 -------------------SRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       627 -------------------~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                                         .+..++|+|++|.|||++++..+.|+||+.|..
T Consensus       162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                               113489999999999998876678999998864

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.32  E-value=4.5e-12  Score=110.60  Aligned_cols=95  Identities=16%  Similarity=0.232  Sum_probs=71.6

Q ss_pred             CCCCCCcceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccc
Q 005825           82 RPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDM  161 (675)
Q Consensus        82 ~pv~~~~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~  161 (675)
                      .++.....+|.++.||+|||++.++  +|++++........++|+|+|||||++.+    ...++|||.-+         
T Consensus        15 ~~L~~g~~~L~~q~dGnLvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~~----~~~~vW~S~t~---------   79 (111)
T 3mez_A           15 NQLSYESAAFVMQGDCNLVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSAN----SNTPVWVYPRS---------   79 (111)
T ss_dssp             CEEEETTEEEEECTTSCEEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECSS----CSSCSEEESSS---------
T ss_pred             CEEecCCEEEEEccCCeEEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeCC----CCEEEEEeccc---------
Confidence            3444455789999999999999876  99999875444578999999999999852    23369998621         


Q ss_pred             cccccccCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCc
Q 005825          162 KMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGE  215 (675)
Q Consensus       162 ~l~~~~~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~  215 (675)
                                          .....|.|.+.++.+|+..++  .  .++|.+++
T Consensus        80 --------------------~~~~~~~~~l~Lq~dGNlvly--~--~~~W~s~t  109 (111)
T 3mez_A           80 --------------------VNTVRGNYAATLGPDQHVTIY--G--PAIWSTPA  109 (111)
T ss_dssp             --------------------CCCCSSCCEEEECTTSCEEEE--C--SEEEECCC
T ss_pred             --------------------cCCCCcCEEEEECCCCeEEEe--c--cCEEccCC
Confidence                                111346899999999996665  3  67898775

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.28  E-value=9e-12  Score=126.76  Aligned_cols=113  Identities=18%  Similarity=0.369  Sum_probs=87.5

Q ss_pred             cccccccCCCc----CCCCCEEEeCCCeEEEeeeCCC--CCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCC
Q 005825           24 LAADTVTPASF----IRDGEKLVSSSQRFELGFFSPG--KSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNG   97 (675)
Q Consensus        24 ~~~~~i~~g~~----l~~~~~l~S~~g~F~lGF~~~~--~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G   97 (675)
                      ..+||+.||+.    |..|+.|.|+ ..++.|+|...  ...+.+|   |.+ ..+++|.+++..+-  . ..|.|+.+|
T Consensus       134 ~ptdtlLpg~~~~~~l~~g~~L~S~-~dps~G~fsl~l~~dGnlvL---y~~-~~~~yW~Sgt~~~~--~-~~l~l~~dG  205 (276)
T 3m7h_A          134 TPAIPLVPGAIDSLLLAPGSELVQG-VVYGAGASKLVFQGDGNLVA---YGP-NGAATWNAGTQGKG--A-VRAVFQGDG  205 (276)
T ss_dssp             CTTSCCCCSCTTCEEECSSEEECTT-CEEEETTEEEEECTTSCEEE---ECT-TSSEEEECCCTTTT--C-CEEEECTTS
T ss_pred             ccccccccccccccccccCcccccC-CCCCCceEEEeecCCceEEE---EeC-CCeEEEECCCCCCc--c-EEEEEcCCC
Confidence            56799999999    8889998654 56777766531  1223333   322 25889999998762  2 689999999


Q ss_pred             eEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccC
Q 005825           98 KLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDY  152 (675)
Q Consensus        98 ~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~  152 (675)
                      +|+++|.++.++|++++.+ ....+|+|+++|||||++      . .++||||||
T Consensus       206 nLvl~d~~~~~vWsS~t~~-~~~~rl~Ld~dGnLvly~------~-~~~Wqsf~~  252 (276)
T 3m7h_A          206 NLVVYGAGNAVLWHSHTGG-HASAVLRLQANGSIAILD------E-KPVWARFGF  252 (276)
T ss_dssp             CEEEECTTSCEEEECSCTT-CTTCEEEECTTSCEEEEE------E-EEEEESSSC
T ss_pred             eEEEEeCCCcEEEEecCCC-CCCEEEEEcCCccEEEEc------C-CCeEEccCc
Confidence            9999999889999999765 345789999999999997      2 579999997

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.22  E-value=2.2e-11  Score=122.74  Aligned_cols=139  Identities=17%  Similarity=0.173  Sum_probs=104.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCc--eeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN--LVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~n--Iv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ..+.+....+.|..+.||+....+|+.+++|.....   ....+..|+.+++.+.+.+  +.+++++...++..++||||
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~   96 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE   96 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred             CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence            445553333456679999998777888999997643   3356788999999886544  56689988888889999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS--------------------------------------  627 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--------------------------------------  627 (675)
                      ++|.+|.  ...      ..   ...++.++++.|..||+..                                      
T Consensus        97 i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (264)
T 1nd4_A           97 VPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL  165 (264)
T ss_dssp             CSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred             cCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence            9999884  211      11   1256777888888888643                                      


Q ss_pred             -----------------CCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          628 -----------------RFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       628 -----------------~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                                       +..++|+|++|.|||++++..++|+||+.|..-
T Consensus       166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g  215 (264)
T 1nd4_A          166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA  215 (264)
T ss_dssp             CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence                             123999999999999988777789999998754

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.21  E-value=5.3e-11  Score=103.54  Aligned_cols=87  Identities=23%  Similarity=0.344  Sum_probs=67.1

Q ss_pred             cceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccccccccc
Q 005825           88 NAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDL  167 (675)
Q Consensus        88 ~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~  167 (675)
                      ..+|.|+.||+|||++. +.++|++++........++|+|+|||||++.     .+.++|||....              
T Consensus        20 ~~~L~~q~dGnLvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~-----~~~~~W~S~t~~--------------   79 (109)
T 3dzw_A           20 RYVFIMQEDCNLVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSP-----RNNPIWASNTGG--------------   79 (109)
T ss_dssp             TEEEEECTTSCEEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECT-----TSCEEEECCCCC--------------
T ss_pred             CEEEEEcCCCcEEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECC-----CCCEEEECCCCC--------------
Confidence            46899999999999987 7899999987543457899999999999985     457899974211              


Q ss_pred             cCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCc
Q 005825          168 KNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGE  215 (675)
Q Consensus       168 ~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~  215 (675)
                                       ..+.|.+.++.+|+..++  +.  +.|.++.
T Consensus        80 -----------------~~~~~~~~L~ddGNlvly--~~--~~W~s~t  106 (109)
T 3dzw_A           80 -----------------ENGNYVCVLQKDRNVVIY--GT--ARWATGT  106 (109)
T ss_dssp             -----------------SSSCEEEEECTTSCEEEE--ES--CCCCCCC
T ss_pred             -----------------CCCCEEEEEeCCCEEEEE--CC--CEEeCCC
Confidence                             124588999999996654  32  6777664

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.18  E-value=8.4e-11  Score=102.34  Aligned_cols=86  Identities=20%  Similarity=0.311  Sum_probs=66.1

Q ss_pred             cceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccccccccc
Q 005825           88 NAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDL  167 (675)
Q Consensus        88 ~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~  167 (675)
                      ..+|.++.||+|||++.  .++|++++........++|+|+|||||++.     .+.++|||-.+-              
T Consensus        25 ~~~L~~q~dGnLvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~-----~~~~iW~S~t~~--------------   83 (110)
T 3r0e_B           25 NHQLVMQGDCNLVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDD-----DFKTIWSSRSSS--------------   83 (110)
T ss_dssp             SCEEEECTTSCEEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECT-----TCCEEEECCCCC--------------
T ss_pred             CEEEEEcCCCeEEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeC-----CCCEEEEcCCcC--------------
Confidence            46899999999999876  599999987533446899999999999985     457899983210              


Q ss_pred             cCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCc
Q 005825          168 KNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGE  215 (675)
Q Consensus       168 ~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~  215 (675)
                                       ..|.|.+.++.+|+..++  +  .+.|.+|+
T Consensus        84 -----------------~~~~~~~~L~~dGNlvly--~--~~~W~t~~  110 (110)
T 3r0e_B           84 -----------------KQGEYVLILQDDGFGVIY--G--PAIFETSS  110 (110)
T ss_dssp             -----------------SSSCCEEEECTTSCEEEE--C--SEEEESCC
T ss_pred             -----------------CCCCEEEEEcCCccEEEe--c--CCEecCCC
Confidence                             124588999999996654  4  37888763

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.14  E-value=1.1e-10  Score=101.45  Aligned_cols=93  Identities=18%  Similarity=0.342  Sum_probs=70.6

Q ss_pred             CCCCCCCcceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhcc
Q 005825           81 DRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQD  160 (675)
Q Consensus        81 ~~pv~~~~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg  160 (675)
                      +.|+.+....|.++.||+|||+++    +|++++........++|+++|||||+|.     .+.++|+|-.         
T Consensus        15 g~~L~~g~~~L~~q~dGNLvl~~~----~Wssnt~~~~~~~~l~l~~dGnLvl~d~-----~~~~vWss~t---------   76 (109)
T 3r0e_A           15 EGHLKNGDFDLVMQDDCNLVLYNG----NWQSNTANNGRDCKLTLTDYGELVIKNG-----DGSTVWKSGA---------   76 (109)
T ss_dssp             TCEEEETTEEEEECTTSCEEEETT----TEECCCTTSCSSCEEEECTTSCEEEECT-----TSCEEEECCC---------
T ss_pred             CCEeECCCEEEEEecCCeEEEEeC----eEEcCCCCCCCcEEEEEcCCCeEEEEeC-----CCCEEEcCCC---------
Confidence            445554567899999999999984    7999987544457899999999999985     4578997611         


Q ss_pred             ccccccccCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCccC
Q 005825          161 MKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWT  217 (675)
Q Consensus       161 ~~l~~~~~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~w~  217 (675)
                                            ....+.|.+.++++|+..++  +  .+.|.+++|-
T Consensus        77 ----------------------~~~~~~~~~~L~~dGNlvly--~--~~~W~s~t~~  107 (109)
T 3r0e_A           77 ----------------------QSVKGNYAAVVHPDGRLVVF--G--PSVFKIDPWV  107 (109)
T ss_dssp             ----------------------CCSSSCCEEEEETTTEEEEE--C--SEEEEECTTS
T ss_pred             ----------------------cCCCcCEEEEEcCCCeEEEE--e--cCEECCCCcc
Confidence                                  01235688999999986655  3  5789999873

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.06  E-value=4.6e-10  Score=119.21  Aligned_cols=143  Identities=13%  Similarity=0.211  Sum_probs=107.9

Q ss_pred             ceeeeeCCcCceeEEEEEEcCCcEEEEEEec--CcC-ccCHHHHHHHHHHHHhcC--CCceeeEEEEEEeC---CeEEEE
Q 005825          511 SMECKLGEGGFGPVYKGRLLNGEEVAVKRLS--SQS-GQGLEEFKNEMLLIAKLQ--HRNLVRILGCCIEQ---GEKILI  582 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~--~~~-~~~~~~f~~E~~il~~l~--H~nIv~l~g~~~~~---~~~~lV  582 (675)
                      ...+.|+.|.++.||+.+..+ ..+++|+..  ... ......+..|+.+++.+.  +..+.+++.++.+.   +..++|
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v  119 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI  119 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred             ceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence            345789999999999998754 578888775  321 123457888999999997  45688999998776   458999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS-----------------------------------  627 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~-----------------------------------  627 (675)
                      |||++|..+.+..     ...++..++..++.++++.|+.||...                                   
T Consensus       120 me~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          120 MEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             EECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             EEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            9999998874321     123667888899999999999999731                                   


Q ss_pred             --------------------CCceEecCCCCCCEEEcCCCC--eEEeeecccee
Q 005825          628 --------------------RFRIIHRDLKASNVLLDRDMN--PKISDFGLARM  659 (675)
Q Consensus       628 --------------------~~~iiHrDlkp~NILl~~~~~--~kl~DFGla~~  659 (675)
                                          +..++|+|++|.|||++.++.  ++|.||++|..
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                356999999999999997753  69999999874

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=98.95  E-value=4.2e-09  Score=90.69  Aligned_cols=77  Identities=22%  Similarity=0.378  Sum_probs=60.2

Q ss_pred             ceEEEeeCCeEEEEeCCCCeEEEeccCCC-CCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccccccccc
Q 005825           89 AVLTISNNGKLVLLNQTNGTIWSTNASSE-AKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDL  167 (675)
Q Consensus        89 ~~l~l~~~G~Lvl~~~~g~~vWss~~~~~-~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~  167 (675)
                      -+|.++.||||||++. +.+||++|+..+ .....++|+++|||||+|.     .+.++|+|-                 
T Consensus        21 y~l~~q~DgNLvly~~-~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~-----~~~~vWss~-----------------   77 (105)
T 4h3o_A           21 YHFIMQDDCNLVLYDH-STSTWASNTEIGGKSGCSAVLQSDGNFVVYDS-----SGRSLWASH-----------------   77 (105)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCCCTTCCSCEEEECTTSCEEEECT-----TCCEEEECC-----------------
T ss_pred             EEEEECCCCeEEEEEC-CEEEEEecCCCCCCccEEEEEeCCccEEEECC-----CcEEEEEec-----------------
Confidence            4699999999999985 679999998643 3356899999999999986     567899861                 


Q ss_pred             cCCCceeEEEecCCCCCCCceeeeeecCCCCceEE
Q 005825          168 KNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMC  202 (675)
Q Consensus       168 ~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~  202 (675)
                                    +....+.|.+.++++|+..++
T Consensus        78 --------------t~~~~~~~~l~L~ddGNlVly   98 (105)
T 4h3o_A           78 --------------STRGSGNYILILQDDGNVIIY   98 (105)
T ss_dssp             --------------CCCCSSCEEEEECTTSCEEEE
T ss_pred             --------------CCCCCCCEEEEEeCCCeEEEE
Confidence                          112345688999999996654

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=98.90  E-value=4.1e-09  Score=104.99  Aligned_cols=89  Identities=21%  Similarity=0.277  Sum_probs=69.4

Q ss_pred             cceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccccccccc
Q 005825           88 NAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDL  167 (675)
Q Consensus        88 ~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~  167 (675)
                      .-+|.|..||+|+|++. +++||.+|+... ....++|+++|||||+|.     .+.+||+|+.+.              
T Consensus        27 ~f~l~f~~~gnl~ly~~-~~~vW~an~~~~-~~~~l~l~~dGnLvl~d~-----~~~~vW~s~~~~--------------   85 (236)
T 1dlp_A           27 SFRFTMQSDCNLVLFDS-DVRVWASNTAGA-TGCRAVLQSDGLLVILTA-----QNTIRWSSGTKG--------------   85 (236)
T ss_dssp             TEEEEECTTSCEEEEES-SSEEECCCCCSC-SCCBCCBCSSSCBCCBCT-----TTCCSCCCCCCC--------------
T ss_pred             CEEEEECCCCcEEEEEC-CEEEEECCCCCC-CCeEEEEcCCCcEEEEcC-----CCcEEEeCCccc--------------
Confidence            35688888999999986 789999998754 567899999999999985     567999998651              


Q ss_pred             cCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCccCC
Q 005825          168 KNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTG  218 (675)
Q Consensus       168 ~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~w~~  218 (675)
                                       ..|.|.+.++.+|+..++  +.  .+|.+..+..
T Consensus        86 -----------------~~~~~~~~l~d~Gnlvl~--~~--~~W~S~~~p~  115 (236)
T 1dlp_A           86 -----------------SIGNYVLVLQPDRTVTIY--GP--GLWDSGTSNK  115 (236)
T ss_dssp             -----------------CSSCCEEEECSSSCEEEE--CS--EEEECSCCCS
T ss_pred             -----------------cCCcEEEEEeCCCCEEEe--cC--CEEECCCCCC
Confidence                             235578889999986554  32  7898877653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.55  E-value=1.2e-07  Score=98.14  Aligned_cols=136  Identities=19%  Similarity=0.193  Sum_probs=100.0

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCc--eeeEEEEEEeCC---eEEEEEEecC
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRN--LVRILGCCIEQG---EKILILEYMP  587 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~n--Iv~l~g~~~~~~---~~~lV~Ey~~  587 (675)
                      +.++.|....||+..    ..+++|.....  .....+..|+.+++.+. +..  +.+++......+   ..|+|||+++
T Consensus        26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~   99 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK   99 (304)
T ss_dssp             CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred             EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence            568999999999863    56888886532  34567899999998883 333  455655544333   3488999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-----------------------------------------  626 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-----------------------------------------  626 (675)
                      |..|.....     ..++..++..++.++++.|+.||..                                         
T Consensus       100 G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  174 (304)
T 3sg8_A          100 GVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD  174 (304)
T ss_dssp             CEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred             CeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence            998865331     2356677778888888888888861                                         


Q ss_pred             --------------CCCceEecCCCCCCEEEcC--CCCeEEeeeccceec
Q 005825          627 --------------SRFRIIHRDLKASNVLLDR--DMNPKISDFGLARMF  660 (675)
Q Consensus       627 --------------~~~~iiHrDlkp~NILl~~--~~~~kl~DFGla~~~  660 (675)
                                    .+..++|+|++|.||++++  ...+.|+||+.+..-
T Consensus       175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~  224 (304)
T 3sg8_A          175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS  224 (304)
T ss_dssp             HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred             HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence                          1245899999999999998  566899999998764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.49  E-value=9.1e-07  Score=91.57  Aligned_cols=137  Identities=21%  Similarity=0.169  Sum_probs=95.7

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCC---ceeeEEEEEE-eCCeEEEEEEecCC
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHR---NLVRILGCCI-EQGEKILILEYMPN  588 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~---nIv~l~g~~~-~~~~~~lV~Ey~~~  588 (675)
                      .+.++.|....||+.    +..+++|.-.  .......+..|..+|..+.+.   .+.+++.++. ..+..++|||+++|
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            356888888899987    5678888753  223456789999999999752   3667777774 34567899999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY------------------------------------------  626 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~------------------------------------------  626 (675)
                      ..+......     .++..++..++.++++.|+.||..                                          
T Consensus        98 ~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l  172 (306)
T 3tdw_A           98 QILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL  172 (306)
T ss_dssp             EECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred             eECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence            988763211     123444445555555555555532                                          


Q ss_pred             ---------------CCCceEecCCCCCCEEEcC---CCC-eEEeeeccceec
Q 005825          627 ---------------SRFRIIHRDLKASNVLLDR---DMN-PKISDFGLARMF  660 (675)
Q Consensus       627 ---------------~~~~iiHrDlkp~NILl~~---~~~-~kl~DFGla~~~  660 (675)
                                     .+..++|+|++|.|||++.   ++. +.|+||+.|..-
T Consensus       173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                           2335799999999999987   455 489999988753

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.36  E-value=4.1e-06  Score=84.61  Aligned_cols=143  Identities=18%  Similarity=0.164  Sum_probs=100.3

Q ss_pred             cCCcceeeeeCCcCce-eEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEE
Q 005825          507 TENFSMECKLGEGGFG-PVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ...|+. +.+..|..+ .||+.... ++..+.+|+-...   ....+..|..+|+.+. +-.+.++++++.+.+..++||
T Consensus        24 l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvm   99 (272)
T 4gkh_A           24 LYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLT   99 (272)
T ss_dssp             HTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred             ccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEE
Confidence            344543 345555544 68987754 4667889886532   3456888999998884 445778999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-------------------------------------  626 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-------------------------------------  626 (675)
                      |+++|.++.+.....       ......++.++++.|+-||..                                     
T Consensus       100 e~l~G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (272)
T 4gkh_A          100 TAIPGKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN  172 (272)
T ss_dssp             ECCCSEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred             EeeCCccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence            999999887654211       112234555566666666631                                     


Q ss_pred             ------------------CCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          627 ------------------SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       627 ------------------~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                                        .+..++|+|+.|.|||+++++.+-|+||+.|..-
T Consensus       173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g  224 (272)
T 4gkh_A          173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA  224 (272)
T ss_dssp             TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred             chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence                              1123799999999999998877889999998753

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.35  E-value=1.2e-06  Score=92.65  Aligned_cols=80  Identities=8%  Similarity=0.023  Sum_probs=57.3

Q ss_pred             eeee-CCcCceeEEEEEEc-------CCcEEEEEEecCcC---ccCHHHHHHHHHHHHhcC-C--CceeeEEEEEEeC--
Q 005825          513 ECKL-GEGGFGPVYKGRLL-------NGEEVAVKRLSSQS---GQGLEEFKNEMLLIAKLQ-H--RNLVRILGCCIEQ--  576 (675)
Q Consensus       513 ~~~I-G~G~fG~Vy~~~~~-------~g~~vAvK~l~~~~---~~~~~~f~~E~~il~~l~-H--~nIv~l~g~~~~~--  576 (675)
                      .+.| +.|....+|+....       +++.+++|+.....   ......+..|+.+++.+. +  ..+.+++.++.+.  
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~  104 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV  104 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence            4677 88989999998764       26678888765422   112356788998888884 2  4577888887665  


Q ss_pred             -CeEEEEEEecCCCCHH
Q 005825          577 -GEKILILEYMPNKSLD  592 (675)
Q Consensus       577 -~~~~lV~Ey~~~gsL~  592 (675)
                       +..++||||++|..+.
T Consensus       105 ~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          105 LGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             TSSCEEEEECCCCBCCC
T ss_pred             cCCceEEEEecCCCChh
Confidence             3568999999987654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.06  E-value=1.8e-05  Score=84.76  Aligned_cols=75  Identities=9%  Similarity=0.148  Sum_probs=51.1

Q ss_pred             eeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-------cCHHHHHHHHHHHHhcCC--C-ceeeEEEEEEeCCeEEE
Q 005825          513 ECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-------QGLEEFKNEMLLIAKLQH--R-NLVRILGCCIEQGEKIL  581 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~f~~E~~il~~l~H--~-nIv~l~g~~~~~~~~~l  581 (675)
                      .+.||.|..+.||+++.. +++.++||.......       ...+++..|.++++.+.+  + .+.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            468999999999999754 467899998653211       234567889998887742  3 34466654  3455689


Q ss_pred             EEEecCCC
Q 005825          582 ILEYMPNK  589 (675)
Q Consensus       582 V~Ey~~~g  589 (675)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999874

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.00  E-value=2.3e-05  Score=81.71  Aligned_cols=141  Identities=14%  Similarity=0.155  Sum_probs=81.4

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-----CCceeeEE-E--EEEeCCeEEEEEEe
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-----HRNLVRIL-G--CCIEQGEKILILEY  585 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-----H~nIv~l~-g--~~~~~~~~~lV~Ey  585 (675)
                      +.|+.|..+.||+....++ .+++|+....    ..++..|..++..+.     .|.++... |  +....+..++||||
T Consensus        38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~  112 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW  112 (346)
T ss_dssp             EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred             eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence            5576677899999987555 5889988752    233444555555443     24443310 0  12346678999999


Q ss_pred             cCCCCHH-----H---------HhcC----CC-C------cccCCHHHHH------------------------------
Q 005825          586 MPNKSLD-----V---------FLFD----PT-K------KRLLGWQARI------------------------------  610 (675)
Q Consensus       586 ~~~gsL~-----~---------~l~~----~~-~------~~~l~~~~~~------------------------------  610 (675)
                      ++|..+.     .         .++.    .. .      .....|...+                              
T Consensus       113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  192 (346)
T 2q83_A          113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI  192 (346)
T ss_dssp             CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred             ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence            9986542     0         0110    00 0      0112332211                              


Q ss_pred             -HHHHHHHHHHHHHHh----------cCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          611 -GIIEGIAQGLLYLHH----------YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       611 -~i~~~ia~~L~yLH~----------~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                       .+...+..++.+|++          ..+..++|+|+++.|||++.++.+.|+||+.+..
T Consensus       193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence             111223446667763          1245699999999999998888999999998864

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.83  E-value=0.00012  Score=75.60  Aligned_cols=140  Identities=20%  Similarity=0.110  Sum_probs=94.0

Q ss_pred             ceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC---CCceeeEEEEEEeCCeEEEEEEecC
Q 005825          511 SMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ---HRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~---H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      ...+.|+.|....+|+... ++..+++|+-...   ....|..|...|+.+.   ...+.+++.++...+..++||||++
T Consensus        39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence            3457899999999999986 4678888886532   3567889999888884   3678899999888889999999999


Q ss_pred             CCCHHH-----------HhcCCCC-c------------------ccCCHHHHH---HHHH----------------HHHH
Q 005825          588 NKSLDV-----------FLFDPTK-K------------------RLLGWQARI---GIIE----------------GIAQ  618 (675)
Q Consensus       588 ~gsL~~-----------~l~~~~~-~------------------~~l~~~~~~---~i~~----------------~ia~  618 (675)
                      +..+..           -|+.... .                  -.-+|.+..   ++..                .+..
T Consensus       115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~  194 (312)
T 3jr1_A          115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ  194 (312)
T ss_dssp             CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence            986521           1121110 0                  012454321   1111                1111


Q ss_pred             H-HHHHHh-cCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          619 G-LLYLHH-YSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       619 ~-L~yLH~-~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      . ...|.. ..++.++|+|+.+.|++++.++ +.|.||.
T Consensus       195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            1 223321 2356799999999999999887 9999984

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.76  E-value=8.5e-05  Score=75.76  Aligned_cols=80  Identities=18%  Similarity=0.237  Sum_probs=61.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCC---CceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH---RNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H---~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ....-.+.+|.|..+.||+.++.+|+.+.||+-..........|..|...|+.+..   -.+.+++++.    ..++|||
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e   90 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME   90 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred             CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence            35566688999999999999999999999998765544555678899999988842   2355666552    3478999


Q ss_pred             ecCCCCH
Q 005825          585 YMPNKSL  591 (675)
Q Consensus       585 y~~~gsL  591 (675)
                      |++++..
T Consensus        91 ~l~~~~~   97 (288)
T 3f7w_A           91 WVDERPP   97 (288)
T ss_dssp             CCCCCCC
T ss_pred             eecccCC
Confidence            9987754

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.67  E-value=0.0002  Score=77.23  Aligned_cols=74  Identities=14%  Similarity=0.178  Sum_probs=47.0

Q ss_pred             eeeeeCCcCceeEEEEEEcCCcEEEEEEecCc------C-cc--CHHHHHHHHHHHH-hcCCCceeeEEEEEEeCCeEEE
Q 005825          512 MECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ------S-GQ--GLEEFKNEMLLIA-KLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       512 ~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~------~-~~--~~~~f~~E~~il~-~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      ..+.||.|....||+... +++.++||.....      . ..  ....+..|+..+. ...+..+.+++.+.  .+..++
T Consensus        38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l  114 (420)
T 2pyw_A           38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI  114 (420)
T ss_dssp             EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred             EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence            347899999999999965 4678999943221      1 11  2233444443332 22335667777765  566799


Q ss_pred             EEEec-CC
Q 005825          582 ILEYM-PN  588 (675)
Q Consensus       582 V~Ey~-~~  588 (675)
                      ||||+ ++
T Consensus       115 v~e~l~~g  122 (420)
T 2pyw_A          115 GMRYLEPP  122 (420)
T ss_dssp             EECCCCTT
T ss_pred             EEeecCCc
Confidence            99999 76

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.33  E-value=0.00073  Score=69.77  Aligned_cols=144  Identities=17%  Similarity=0.134  Sum_probs=81.9

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCc--eeeEEEE------EEeCCeEEEEEE
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN--LVRILGC------CIEQGEKILILE  584 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~n--Iv~l~g~------~~~~~~~~lV~E  584 (675)
                      .+.|+.|....+|+....++ .+++|.....  ...+++..|+.++..+....  +.+++..      ....+..+++||
T Consensus        27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~  103 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS  103 (322)
T ss_dssp             EEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred             eeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence            35677888899999987665 6788887652  12245566777776664212  2333321      123456789999


Q ss_pred             ecCCCCHHH----H----------hc----CCCCc-----ccCCHHHHHH------------HHHHHHHHHHHHHhc---
Q 005825          585 YMPNKSLDV----F----------LF----DPTKK-----RLLGWQARIG------------IIEGIAQGLLYLHHY---  626 (675)
Q Consensus       585 y~~~gsL~~----~----------l~----~~~~~-----~~l~~~~~~~------------i~~~ia~~L~yLH~~---  626 (675)
                      |++|..+..    .          ++    .....     ....|...+.            +...+.+.++++++.   
T Consensus       104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~  183 (322)
T 2ppq_A          104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK  183 (322)
T ss_dssp             CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred             eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence            999865421    0          11    00000     1112332111            011244556666542   


Q ss_pred             -CCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          627 -SRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       627 -~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                       .+..++|+|+.+.|||++++..+.|+||+.+..
T Consensus       184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             SSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence             234699999999999999876668999998764

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.25  E-value=0.00046  Score=74.64  Aligned_cols=73  Identities=18%  Similarity=0.278  Sum_probs=50.7

Q ss_pred             eeeeCCcCceeEEEEEEcC--------CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCce-eeEEEEEEeCCeEEEEE
Q 005825          513 ECKLGEGGFGPVYKGRLLN--------GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL-VRILGCCIEQGEKILIL  583 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nI-v~l~g~~~~~~~~~lV~  583 (675)
                      .+.|+.|-...+|+....+        ++.+.+|+....  ...+.+..|..++..+...++ .++++.+.+    .+||
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence            4678888889999998753        478888887431  122566689998888853333 567776542    3899


Q ss_pred             EecCCCCH
Q 005825          584 EYMPNKSL  591 (675)
Q Consensus       584 Ey~~~gsL  591 (675)
                      ||++|.+|
T Consensus       152 e~l~G~~l  159 (429)
T 1nw1_A          152 EYIPSRPL  159 (429)
T ss_dssp             CCCCEEEC
T ss_pred             EEeCCccc
Confidence            99987444

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.23  E-value=0.0019  Score=67.12  Aligned_cols=142  Identities=15%  Similarity=0.129  Sum_probs=73.5

Q ss_pred             eeeCCcCcee-EEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC--CCceeeEEEEEEeCCeEEEEEEecCCCC
Q 005825          514 CKLGEGGFGP-VYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ--HRNLVRILGCCIEQGEKILILEYMPNKS  590 (675)
Q Consensus       514 ~~IG~G~fG~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~--H~nIv~l~g~~~~~~~~~lV~Ey~~~gs  590 (675)
                      +.|+.|.... +|+....+++.+++|.......   +.+..|+.++..+.  .-.+.+++.+..+.+  ++|||++.+..
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~   98 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL   98 (333)
T ss_dssp             CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred             eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence            4565554443 6676654466777776543211   33445666666663  234566777644333  78999998766


Q ss_pred             HHHHhcCC---------------------CC--cccCCHHHHH--------------------HHHHHHHHHHHHHH---
Q 005825          591 LDVFLFDP---------------------TK--KRLLGWQARI--------------------GIIEGIAQGLLYLH---  624 (675)
Q Consensus       591 L~~~l~~~---------------------~~--~~~l~~~~~~--------------------~i~~~ia~~L~yLH---  624 (675)
                      +.+.+...                     ..  ...++.....                    .....+...+..|.   
T Consensus        99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~  178 (333)
T 3csv_A           99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ  178 (333)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence            64433110                     00  0011111000                    00011122233331   


Q ss_pred             hcCCCceEecCCCCCCEEEcCC----CCeEEeeeccceec
Q 005825          625 HYSRFRIIHRDLKASNVLLDRD----MNPKISDFGLARMF  660 (675)
Q Consensus       625 ~~~~~~iiHrDlkp~NILl~~~----~~~kl~DFGla~~~  660 (675)
                      ...+..++|+|+.+.||+++.+    ..+.|+||+.|..-
T Consensus       179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            1224569999999999999875    68999999998753

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.20  E-value=0.0039  Score=67.81  Aligned_cols=74  Identities=14%  Similarity=0.110  Sum_probs=48.8

Q ss_pred             eeeeCCcCceeEEEEEEcC-CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCce-eeEEEEEEeCCeEEEEEEecCCCC
Q 005825          513 ECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL-VRILGCCIEQGEKILILEYMPNKS  590 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nI-v~l~g~~~~~~~~~lV~Ey~~~gs  590 (675)
                      .+.|+.|-...+|+....+ +..+.+|+....... .-.-..|..++..+...++ .++++.+.  +  .+||||++|..
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence            3678888889999998865 477888876542221 1122578888988865444 56777763  2  25999999855


Q ss_pred             H
Q 005825          591 L  591 (675)
Q Consensus       591 L  591 (675)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.15  E-value=0.0033  Score=64.94  Aligned_cols=142  Identities=14%  Similarity=0.146  Sum_probs=83.5

Q ss_pred             eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCC--CceeeEEEE-----EEeCCeEEEEEEec
Q 005825          514 CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH--RNLVRILGC-----CIEQGEKILILEYM  586 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H--~nIv~l~g~-----~~~~~~~~lV~Ey~  586 (675)
                      ..++ |....||+....+|+.+++|..... ....+.+..|..++..+..  -.+.+++..     ....+..++|||++
T Consensus        32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~-~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EEEC-CSSSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             Eeec-CcccceEEEEcCCCCEEEEEEcCCC-CCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            4576 7788999988777778999998642 1234567778888777742  223444432     12345678899999


Q ss_pred             CCCCHH-----HH---------hc----CC--CCcccCCHHHH----HHH---------------HHHHHHHHHHHHhc-
Q 005825          587 PNKSLD-----VF---------LF----DP--TKKRLLGWQAR----IGI---------------IEGIAQGLLYLHHY-  626 (675)
Q Consensus       587 ~~gsL~-----~~---------l~----~~--~~~~~l~~~~~----~~i---------------~~~ia~~L~yLH~~-  626 (675)
                      +|..+.     ..         ++    ..  ......++...    ..+               ...+.+.++.+.+. 
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            985532     11         11    00  00111222110    001               11112223333321 


Q ss_pred             ---CCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          627 ---SRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       627 ---~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                         .+..++|+|+++.|||++ + .+.|+||+.+..
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence               344589999999999999 4 899999988764

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.14  E-value=0.0014  Score=69.44  Aligned_cols=141  Identities=17%  Similarity=0.208  Sum_probs=83.1

Q ss_pred             eeeCCcCceeEEEEEEcC--------CcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEEE
Q 005825          514 CKLGEGGFGPVYKGRLLN--------GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      +.|..|-...+|+....+        ++.+.+|+-.. .......+.+|..+++.+. +.-..++++.+.+    .+|||
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e  130 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ  130 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence            567778788899988642        46888888533 2234566778999988874 3223567776643    28999


Q ss_pred             ecCCCCHHHH-----------------hcCCC--CcccCC--HHHHHHHHHHHH-------------------HHHHHHH
Q 005825          585 YMPNKSLDVF-----------------LFDPT--KKRLLG--WQARIGIIEGIA-------------------QGLLYLH  624 (675)
Q Consensus       585 y~~~gsL~~~-----------------l~~~~--~~~~l~--~~~~~~i~~~ia-------------------~~L~yLH  624 (675)
                      |++|..|..-                 |+...  -.+...  |.+..++..++.                   +.+..|.
T Consensus       131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~  210 (379)
T 3feg_A          131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR  210 (379)
T ss_dssp             CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred             EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence            9998665311                 11110  011122  333333333321                   2233333


Q ss_pred             h-----cCCCceEecCCCCCCEEEcCC----CCeEEeeecccee
Q 005825          625 H-----YSRFRIIHRDLKASNVLLDRD----MNPKISDFGLARM  659 (675)
Q Consensus       625 ~-----~~~~~iiHrDlkp~NILl~~~----~~~kl~DFGla~~  659 (675)
                      +     ..+..++|+|+.+.|||++.+    +.+.|+||..|..
T Consensus       211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            2     223468999999999999876    7899999998874

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.08  E-value=0.0017  Score=66.45  Aligned_cols=138  Identities=12%  Similarity=0.101  Sum_probs=75.9

Q ss_pred             eeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCce-eeEEEEEEeCCeEEEEEEec-CCCC
Q 005825          513 ECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL-VRILGCCIEQGEKILILEYM-PNKS  590 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nI-v~l~g~~~~~~~~~lV~Ey~-~~gs  590 (675)
                      .+.|+.|....+|+.     +.+.+|+-...... ......|+.+++.+....+ .++++.  ..+.-++|+||+ ++.+
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence            478989999999998     56888877643221 1223567777777642222 456654  344457899999 6654


Q ss_pred             HHHH------------------hcCCCC--cccCCHHHH-HHHHH--------------HHHHHHHHH----Hh-cCCCc
Q 005825          591 LDVF------------------LFDPTK--KRLLGWQAR-IGIIE--------------GIAQGLLYL----HH-YSRFR  630 (675)
Q Consensus       591 L~~~------------------l~~~~~--~~~l~~~~~-~~i~~--------------~ia~~L~yL----H~-~~~~~  630 (675)
                      +...                  +|....  ........+ ..+..              .+.+.+..|    .. ..+..
T Consensus        95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~  174 (301)
T 3dxq_A           95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA  174 (301)
T ss_dssp             CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred             CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence            4210                  111100  000111111 01100              011111111    11 22345


Q ss_pred             eEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          631 IIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       631 iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++|+|+.|.||+ .+++.+.|+||..|..
T Consensus       175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          175 ACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            899999999999 5667889999998874

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.85  E-value=0.0019  Score=68.20  Aligned_cols=74  Identities=12%  Similarity=0.092  Sum_probs=44.7

Q ss_pred             eeeeCCcCceeEEEEEEcC---------CcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCc-eeeEEEEEEeCCeEEEE
Q 005825          513 ECKLGEGGFGPVYKGRLLN---------GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN-LVRILGCCIEQGEKILI  582 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~n-Iv~l~g~~~~~~~~~lV  582 (675)
                      .+.|+.|-...+|+....+         ++.+.+|+...... .......|..++..+...+ ..++++..  .  -++|
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v  112 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI  112 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence            3568888888999998754         26788887654222 1223467888888775333 44676554  2  2689


Q ss_pred             EEecCCCCH
Q 005825          583 LEYMPNKSL  591 (675)
Q Consensus       583 ~Ey~~~gsL  591 (675)
                      |||++|..+
T Consensus       113 ~e~i~G~~l  121 (369)
T 3c5i_A          113 EEWLYGDPL  121 (369)
T ss_dssp             EECCCSEEC
T ss_pred             EEEecCCcC
Confidence            999998643

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.40  E-value=0.013  Score=60.90  Aligned_cols=33  Identities=24%  Similarity=0.419  Sum_probs=28.9

Q ss_pred             CCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       628 ~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +..++|+|+.+.||++++++.+.|+||+.+..-
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            456999999999999998889999999887753

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=95.03  E-value=0.11  Score=55.63  Aligned_cols=74  Identities=12%  Similarity=0.088  Sum_probs=48.7

Q ss_pred             eeeeCCcCceeEEEEEEcC--------CcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEEEE
Q 005825          513 ECKLGEGGFGPVYKGRLLN--------GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      .+.|..|--..+|+....+        ++.+.+|+-.... ...-...+|..+++.+. +.-..++++.+  .  -++||
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence            4678778888999998753        5788888864432 22223457888887774 33345666543  2  27899


Q ss_pred             EecCCCCH
Q 005825          584 EYMPNKSL  591 (675)
Q Consensus       584 Ey~~~gsL  591 (675)
                      ||++|..|
T Consensus       150 efI~G~~l  157 (424)
T 3mes_A          150 EFIDGEPL  157 (424)
T ss_dssp             ECCCSEEC
T ss_pred             EEeCCccC
Confidence            99998764

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=91.51  E-value=0.46  Score=50.38  Aligned_cols=29  Identities=24%  Similarity=0.418  Sum_probs=25.2

Q ss_pred             eEecCCCCCCEEE------cCCCCeEEeeecccee
Q 005825          631 IIHRDLKASNVLL------DRDMNPKISDFGLARM  659 (675)
Q Consensus       631 iiHrDlkp~NILl------~~~~~~kl~DFGla~~  659 (675)
                      ++|+|+.+.|||+      +++..++++||.+|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            5799999999999      4567899999999874

>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*

Probab=88.03  E-value=0.51  Score=37.59  Aligned_cols=34  Identities=24%  Similarity=0.471  Sum_probs=28.4

Q ss_pred             cCCHHHHHHHHhccCceeeeecccccCCceeEEecc
Q 005825          362 SMNLQQCAAECLKNCTCKAYANSNVTEGSGCLMWFG  397 (675)
Q Consensus       362 ~~~~~~C~~~Cl~nCsC~A~~~~~~~~~~~C~~w~~  397 (675)
                      ..++++|++.|+.+=.|.||.|...  ...|+++.+
T Consensus        29 ~~sl~~Cq~aC~a~~~C~aFTyN~~--s~~CflKs~   62 (82)
T 2ll3_A           29 ASSLSECRARCQAEKECSHYTYNVK--SGLCYPKRG   62 (82)
T ss_dssp             CSSHHHHHHHHHHCTTEEEEEEETT--TTEEEEEES
T ss_pred             CCCHHHHHHHhhccCCCCeEEeccC--CCceEcccC
Confidence            4689999999999999999999732  456999765

>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A

Probab=82.42  E-value=0.36  Score=38.88  Aligned_cols=47  Identities=21%  Similarity=0.335  Sum_probs=36.1

Q ss_pred             cCCCCCCCccCCCCcccC-C-CCCCCCCccCCCccCCCCCCCCCCCCccCCCCCCCC
Q 005825          285 PDDYCGKYGYCGANTICG-P-DQKPMCQCLEGFRLKSQFNQTGPIKCERSHSSECIK  339 (675)
Q Consensus       285 p~~~C~~~~~CG~~g~C~-~-~~~~~C~C~~Gf~~~~~~~~~~~~gC~r~~~~~C~~  339 (675)
                      +...| ++..|+.|+.|- + +....|.|+.||...       ...|+++...+|..
T Consensus         3 ~~h~C-~~tkcp~NA~Cyr~~dg~EecRCllnykk~-------~~kCV~~~~~~C~~   51 (95)
T 1b9w_A            3 SEHRC-IDTNVPENAACYRYLDGTEEWRCLLYFKED-------AGKCVPAPNMTCKD   51 (95)
T ss_dssp             GGGSC-SSCCCCTTEEEEECTTSCEEEEECTTEEEE-------TTEEEECTTCCTTT
T ss_pred             cCccc-ccCCCCCCcCeEEEcCCCEEEEEECCeEec-------CCEEEcCCCCCccc
Confidence            45668 667999999994 2 467899999999974       23588888777754

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=81.54  E-value=41  Score=32.79  Aligned_cols=73  Identities=15%  Similarity=0.274  Sum_probs=45.6

Q ss_pred             EEEEEecCCCcEEEEecCCCC--CC----CCcceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeC
Q 005825           63 LGIWFRKVPDTVVWVANRDRP--IS----DHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDN  136 (675)
Q Consensus        63 lgiw~~~~~~tvVW~Anr~~p--v~----~~~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~  136 (675)
                      +.+|= .-..+++|...+..+  +.    .+.+.+-++.++.+...|.+|..+|.-..........+..+.+||+++-+.
T Consensus        17 v~~~d-~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~   95 (276)
T 3no2_A           17 IAIIN-KDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWC   95 (276)
T ss_dssp             EEEEE-TTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEE
T ss_pred             EEEEE-CCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEec
Confidence            45552 112678899877542  11    123445556666677778889999998764222334567788899888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	675
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-47
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-45
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-45
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-43
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-43
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-43
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-42
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-42
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-42
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	7e-42
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-41
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-41
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-41
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-40
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-40
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-40
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-39
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	9e-39
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-38
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-38
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-38
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	9e-38
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-37
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-37
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	9e-37
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-36
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-36
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-35
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-35
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-35
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-34
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-34
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-34
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-34
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-34
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-33
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	7e-33
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-32
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-32
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-32
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-32
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-31
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-31
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	9e-31
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-30
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	8e-30
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-29
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-29
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-28
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	7e-28
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-27
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-27
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-27
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-27
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	7e-26
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	9e-26
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-25
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-25
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-25
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	8e-25
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	4e-23
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	8e-23
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	8e-23
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-18
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	2e-16
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	4e-15
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	0.003
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	9e-15
d1b2pa_	119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	2e-14
d1dlpa1	115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	4e-10

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (418), Expect = 7e-47
 Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 6/168 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
              ++  ++G G FG VYKG+      V +  +++ + Q L+ FKNE+ ++ K +H N++
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
             +G      +  ++ ++    SL   L     +        I I    AQG+ YLH   
Sbjct: 68  LFMGYS-TAPQLAIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHA-- 122

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              IIHRDLK++N+ L  D+  KI DFGLA +          +++ G+
Sbjct: 123 -KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (410), Expect = 2e-45
 Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 11/172 (6%)

Query: 506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGL-EEFKNEMLLIAKLQH 563
             ++F    +LG G  G V+K     +G  +A K +  +    +  +   E+ ++ +   
Sbjct: 4   KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
             +V   G     GE  + +E+M   SLD  L    K   +  Q    +   + +GL YL
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYL 120

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
               + +I+HRD+K SN+L++     K+ DFG++               VGT
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----ANSFVGT 166

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (405), Expect = 6e-45
 Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 6/164 (3%)

Query: 507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN 565
            + + +  +LG+G FG VYK +        A K + ++S + LE++  E+ ++A   H N
Sbjct: 11  EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 70

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++L     +    +++E+    ++D  + +   +R L       + +     L YLH 
Sbjct: 71  IVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLH- 127

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
               +IIHRDLKA N+L   D + K++DFG++        + ++
Sbjct: 128 --DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS 169

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (392), Expect = 2e-43
 Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 7/168 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
              +   ++G G FG V+ G  LN ++VA+K +  +     E+F  E  ++ KL H  LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 63

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++ G C+EQ    L+ E+M +  L  +L    ++ L   +  +G+   + +G   + +  
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDYLRT--QRGLFAAETLLGMCLDVCEG---MAYLE 118

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
              +IHRDL A N L+  +   K+SDFG+ R    D+   ++      
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-SSTGTKFP 165

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (392), Expect = 2e-43
 Identities = 54/168 (32%), Positives = 83/168 (49%), Gaps = 7/168 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E   +  +LG G FG V+ G      +VAVK L  Q     + F  E  L+ +LQH+ LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           R+     +     +I EYM N SL  FL  P+  +L      + +   IA+G+ ++   +
Sbjct: 72  RLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKL-TINKLLDMAAQIAEGMAFIEERN 129

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
               IHRDL+A+N+L+   ++ KI+DFGLAR+   +E           
Sbjct: 130 ---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFP 173

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  155 bits (394), Expect = 3e-43
 Identities = 54/173 (31%), Positives = 83/173 (47%), Gaps = 16/173 (9%)

Query: 507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQ 562
            + FS   ++G G FG VY  R + N E VA+K++S    QS +  ++   E+  + KL+
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H N ++  GC + +    L++EY    + D+       K+ L       +  G  QGL Y
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAY 130

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           LH +    +IHRD+KA N+LL      K+ DFG A +             VGT
Sbjct: 131 LHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIM------APANSFVGT 174

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (386), Expect = 1e-42
 Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 8/170 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHR 564
           E++ +   +G G +G   K R   +G+ +  K L   S +    +   +E+ L+ +L+H 
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 565 NLVRILGCCIEQGEKIL--ILEYMPNKSLDVFLFDPTKKR-LLGWQARIGIIEGIAQGLL 621
           N+VR     I++    L  ++EY     L   +   TK+R  L  +  + ++  +   L 
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123

Query: 622 YLH--HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
             H        ++HRDLK +NV LD   N K+ DFGLAR+   D      
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA 173

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  153 bits (387), Expect = 2e-42
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 19/191 (9%)

Query: 498 FSLASVAAATENFSMEC---------KLGEGGFGPVYKGRLL----NGEEVAVKRL-SSQ 543
           F+      A   F+ E           +G G FG V  G L         VA+K L S  
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 544 SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL 603
           + +   +F +E  ++ +  H N++ + G   +    ++I E+M N SLD FL     +  
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF- 125

Query: 604 LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
                 +G++ GIA G+ YL        +HRDL A N+L++ ++  K+SDFGL+R    D
Sbjct: 126 -TVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 181

Query: 664 ELQGNTKRIVG 674
                    +G
Sbjct: 182 TSDPTYTSALG 192

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (381), Expect = 5e-42
 Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 7/168 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           ++ +   +LG G FG V  G+     +VA+K +   S    +EF  E  ++  L H  LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++ G C +Q    +I EYM N  L  +L +   +     Q  + + + + + + YL    
Sbjct: 63  QLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQLLEMCKDVCEAMEYLES-- 118

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
             + +HRDL A N L++     K+SDFGL+R    DE   +       
Sbjct: 119 -KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV-GSKFP 164

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (381), Expect = 7e-42
 Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 8/170 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLS-SQSGQGLEEFKNEMLLIAKLQHRN 565
           E++ +   LGEG +G V         E VAVK +   ++    E  K E+ +   L H N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V+  G   E   + L LEY     L   +        +           +  G++YLH 
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG 121

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
                I HRD+K  N+LLD   N KISDFGLA +F  +  +    ++ GT
Sbjct: 122 I---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  151 bits (381), Expect = 1e-41
 Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 6/163 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
            + +M+ KLG G +G VY+G        VAVK L   + + +EEF  E  ++ +++H NL
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 75

Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           V++LG C  +    +I E+M   +L  +L +  ++  +     + +   I+  + YL   
Sbjct: 76  VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-VSAVVLLYMATQISSAMEYLEKK 134

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
                IHRDL A N L+  +   K++DFGL+R+  GD    + 
Sbjct: 135 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 174

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (380), Expect = 2e-41
 Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 17/172 (9%)

Query: 515 KLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCI 574
            +G+G FG V++G+   GEEVAVK  SS+  +     + E+     L+H N++  +    
Sbjct: 10  SIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADN 67

Query: 575 EQGEKI----LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH----- 625
           +         L+ +Y  + SL  +L     +  +  +  I +    A GL +LH      
Sbjct: 68  KDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF--GGDELQGNTKRIVGT 675
             +  I HRDLK+ N+L+ ++    I+D GLA       D +       VGT
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (377), Expect = 4e-41
 Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 6/162 (3%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           E+  +E KLG+G FG V+ G       VA+K L   +    E F  E  ++ KL+H  LV
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 75

Query: 568 RILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS 627
           ++      +    ++ EYM   SL  FL   T K L      + +   IA G+ Y+    
Sbjct: 76  QLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYL-RLPQLVDMAAQIASGMAYVERM- 132

Query: 628 RFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
               +HRDL+A+N+L+  ++  K++DFGLAR+   +E     
Sbjct: 133 --NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 172

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (371), Expect = 1e-40
 Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 8/163 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +   +   +G+G FG V  G    G +VAVK + + +    + F  E  ++ +L+H NLV
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLV 63

Query: 568 RILGCCIEQGEKI-LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           ++LG  +E+   + ++ EYM   SL  +L     + +LG    +     + + + YL   
Sbjct: 64  QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS-RGRSVLGGDCLLKFSLDVCEAMEYLE-- 120

Query: 627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
                +HRDL A NVL+  D   K+SDFGL +     +  G  
Sbjct: 121 -GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 162

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  146 bits (370), Expect = 3e-40
 Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 12/176 (6%)

Query: 506 ATENFSM-ECKLGEGGFGPVYKGRLL---NGEEVAVKRLSSQSGQG-LEEFKNEMLLIAK 560
             +N  + + +LG G FG V +G         +VA+K L   + +   EE   E  ++ +
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           L +  +VR++G C +    +L++E      L  FL    K+  +       ++  ++ G+
Sbjct: 66  LDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGM 122

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR-IVGT 675
            YL        +HRDL A NVLL      KISDFGL++  G D+     +      
Sbjct: 123 KYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 175

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  146 bits (369), Expect = 6e-40
 Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 31/196 (15%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQSGQGLE-EFKNEMLLIAK 560
            N      +GEG FG V++ R            VAVK L  ++   ++ +F+ E  L+A+
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL----------------- 603
             + N+V++LG C       L+ EYM    L+ FL   +   +                 
Sbjct: 73  FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 132

Query: 604 ----LGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
               L    ++ I   +A G+ YL      + +HRDL   N L+  +M  KI+DFGL+R 
Sbjct: 133 GPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRN 189

Query: 660 FGGDELQGNTKRIVGT 675
               +           
Sbjct: 190 IYSADYYKADGNDAIP 205

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (362), Expect = 6e-39
 Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 10/178 (5%)

Query: 499 SLASVAAATENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLL 557
           S+ SV    + ++   K+G+G  G VY    +  G+EVA+++++ Q     E   NE+L+
Sbjct: 11  SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70

Query: 558 IAKLQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIA 617
           + + ++ N+V  L   +   E  +++EY+   S    L D   +  +       +     
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS----LTDVVTETCMDEGQIAAVCRECL 126

Query: 618 QGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           Q L +LH     ++IHRD+K+ N+LL  D + K++DFG       +  Q     +VGT
Sbjct: 127 QALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGT 179

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  144 bits (363), Expect = 9e-39
 Identities = 51/196 (26%), Positives = 73/196 (37%), Gaps = 31/196 (15%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQSGQG-LEEFKNEMLLIAK 560
           EN      LG G FG V               +VAVK L  ++     E   +E+ ++ +
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 561 L-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKK------------------ 601
           L  H N+V +LG C   G   LI EY     L  +L    +K                  
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156

Query: 602 --RLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM 659
              +L ++  +     +A+G+ +L        +HRDL A NVL+      KI DFGLAR 
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARD 213

Query: 660 FGGDELQGNTKRIVGT 675
              D            
Sbjct: 214 IMSDSNYVVRGNARLP 229

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (356), Expect = 2e-38
 Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 14/172 (8%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQH 563
           E+F +   LG+G FG VY  R   +   +A+K L     +      + + E+ + + L+H
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
            N++R+ G   +     LILEY P  ++   L   +K      Q     I  +A  L Y 
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYC 122

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H     R+IHRD+K  N+LL      KI+DFG +              + GT
Sbjct: 123 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----RTTLCGT 167

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (359), Expect = 2e-38
 Identities = 50/191 (26%), Positives = 69/191 (36%), Gaps = 26/191 (13%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSGQG-LEEFKNEMLLIAK 560
              S    LG G FG V +              VAVK L   +     E   +E+ +++ 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 561 L-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL---------------L 604
           L  H N+V +LG C   G  ++I EY     L  FL       +               L
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +  +     +A+G+ +L        IHRDL A N+LL      KI DFGLAR    D 
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199

Query: 665 LQGNTKRIVGT 675
                      
Sbjct: 200 NYVVKGNARLP 210

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (355), Expect = 2e-38
 Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 16/171 (9%)

Query: 513 ECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRI 569
           + ++G G F  VYKG       EVA   L  +  +    + FK E  ++  LQH N+VR 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 570 LGCCIEQGEK----ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
                   +     +L+ E M + +L  +L    + +++  +        I +GL +LH 
Sbjct: 74  YDSWESTVKGKKCIVLVTELMTSGTLKTYLK---RFKVMKIKVLRSWCRQILKGLQFLHT 130

Query: 626 YSRFRIIHRDLKASNVLL-DRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            +   IIHRDLK  N+ +     + KI D GLA +          K ++GT
Sbjct: 131 RTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS----FAKAVIGT 176

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (353), Expect = 9e-38
 Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 10/171 (5%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQH 563
           E+F     LGEG F  V   R L    E A+K L          +     E  ++++L H
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
              V++     +  +    L Y  N  L  ++             R       A+ +  L
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYT----AEIVSAL 121

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVG 674
            +     IIHRDLK  N+LL+ DM+ +I+DFG A++   +  Q      VG
Sbjct: 122 EYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 172

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 2e-37
 Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 13/167 (7%)

Query: 515 KLGEGGFGPVYKGRLLN---GEEVAVKRLSSQSGQG--LEEFKNEMLLIAKLQHRNLVRI 569
           +LG G FG V KG        + VAVK L +++      +E   E  ++ +L +  +VR+
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73

Query: 570 LGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
           +G C E    +L++E      L+ +L    + R +  +  I ++  ++ G+ YL      
Sbjct: 74  IGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEE---S 126

Query: 630 RIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTK-RIVGT 675
             +HRDL A NVLL      KISDFGL++    DE     +      
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 173

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (344), Expect = 8e-37
 Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 13/175 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAK 560
           ++  +  KLG+G FG V +G           VAVK L        + +++F  E+  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           L HRNL+R+ G  +      ++ E  P  SL   L       LLG  +R  +   +A+G+
Sbjct: 68  LDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGM 124

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            YL      R IHRDL A N+LL      KI DFGL R    ++     +     
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  139 bits (350), Expect = 9e-37
 Identities = 35/170 (20%), Positives = 69/170 (40%), Gaps = 8/170 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
           +++ +  +LG G FG V++      G   A K + +      E  + E+  ++ L+H  L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           V +     +  E ++I E+M    L   + D  +   +     +  +  + +GL ++H  
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMH-- 141

Query: 627 SRFRIIHRDLKASNVLLDRDMNP--KISDFGLARMFGGDELQGNTKRIVG 674
                +H DLK  N++     +   K+ DFGL       +    T     
Sbjct: 142 -ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 190

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (347), Expect = 1e-36
 Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 12/174 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEE----VAVKRLS-SQSGQGLEEFKNEMLLIAKL 561
             F     LG G FG VYKG  +  GE+    VA+K L  + S +  +E  +E  ++A +
Sbjct: 9   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
            + ++ R+LG C+      LI + MP   L    +    K  +G Q  +     IA+G+ 
Sbjct: 69  DNPHVCRLLGICLT-STVQLITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMN 125

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           YL      R++HRDL A NVL+    + KI+DFGLA++ G +E + + +     
Sbjct: 126 YLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (346), Expect = 1e-36
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 11/163 (6%)

Query: 515 KLGEGGFGPVYKGRLLN----GEEVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHRNLVRI 569
            +G G FG VY G LL+        AVK L+  +  G + +F  E +++    H N++ +
Sbjct: 34  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93

Query: 570 LGCCIE-QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
           LG C+  +G  +++L YM +  L  F+ + T    +      G+          +   + 
Sbjct: 94  LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG-----MKFLAS 148

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR 671
            + +HRDL A N +LD     K++DFGLAR     E      +
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 191

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  135 bits (341), Expect = 1e-35
 Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 8/161 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
           + + +  +LG G FG V++      G     K +++         KNE+ ++ +L H  L
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           + +     ++ E +LILE++    L   +    +   +     I  +    +GL ++H  
Sbjct: 89  INLHDAFEDKYEMVLILEFLSGGELFDRIA--AEDYKMSEAEVINYMRQACEGLKHMH-- 144

Query: 627 SRFRIIHRDLKASNVLLDRDMNP--KISDFGLARMFGGDEL 665
               I+H D+K  N++ +       KI DFGLA     DE+
Sbjct: 145 -EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 184

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 3e-35
 Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 17/182 (9%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLS-SQSGQGLEEFKNEMLLIAK 560
           E  +M  +LG+G FG VY+G             VA+K ++ + S +   EF NE  ++ +
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRL-------LGWQARIGII 613
               ++VR+LG   +    ++I+E M    L  +L                     I + 
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139

Query: 614 EGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIV 673
             IA G+ YL+     + +HRDL A N ++  D   KI DFG+ R     +      + +
Sbjct: 140 GEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 196

Query: 674 GT 675
             
Sbjct: 197 LP 198

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (334), Expect = 4e-35
 Identities = 50/186 (26%), Positives = 79/186 (42%), Gaps = 24/186 (12%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNG---EEVAVKRLS-SQSGQGLEEFKNEMLLIAKL-Q 562
            +   +  +GEG FG V K R+       + A+KR+    S     +F  E+ ++ KL  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFL-------------FDPTKKRLLGWQAR 609
           H N++ +LG C  +G   L +EY P+ +L  FL                +    L  Q  
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129

Query: 610 IGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
           +     +A+G+ YL      + IHRDL A N+L+  +   KI+DFGL+R           
Sbjct: 130 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV---KK 183

Query: 670 KRIVGT 675
                 
Sbjct: 184 TMGRLP 189

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  133 bits (335), Expect = 1e-34
 Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 13/166 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQ- 562
            +FS+   +G GGFG VY  R    G+  A+K L  +     QG     NE ++++ +  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 563 --HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
                +V +        +   IL+ M    L   L    +  +            I  GL
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEIILGL 120

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
            ++H+     +++RDLK +N+LLD   + +ISD GLA  F   +  
Sbjct: 121 EHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 163

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 1e-34
 Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 12/173 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE----VAVKRLSSQSGQGL-EEFKNEMLLIAKLQ 562
           E   +   +GEG FG V++G  ++ E     VA+K   + +   + E+F  E L + +  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H ++V+++G   E     +I+E      L  FL        L   + I     ++  L Y
Sbjct: 67  HPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAY 123

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           L      R +HRD+ A NVL+  +   K+ DFGL+R            +    
Sbjct: 124 LE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLP 172

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (331), Expect = 2e-34
 Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 5/165 (3%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQG-LEEFKNEMLLIAKLQHR 564
              ++    +GEG +G V      +N   VA+K++S    Q   +    E+ ++ + +H 
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N++ I         + +   Y+    +   L+   K + L        +  I +GL Y+H
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 126

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
                 ++HRDLK SN+LL+   + KI DFGLAR+   D      
Sbjct: 127 ---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 168

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (327), Expect = 3e-34
 Identities = 47/190 (24%), Positives = 70/190 (36%), Gaps = 25/190 (13%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSGQG--LEEFKNEMLLIA 559
           +   +   LG G FG V +              VAVK L   +             +LI 
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 560 KLQHRNLVRILGCCIEQGEKILIL-EYMPNKSLDVFLF-------------DPTKKRLLG 605
              H N+V +LG C + G  ++++ E+    +L  +L              +   K  L 
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132

Query: 606 WQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDEL 665
            +  I     +A+G+ +L      + IHRDL A N+LL      KI DFGLAR    D  
Sbjct: 133 LEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 189

Query: 666 QGNTKRIVGT 675
                     
Sbjct: 190 YVRKGDARLP 199

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (324), Expect = 5e-34
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 11/168 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEE-----VAVKRLSSQSGQG-LEEFKNEMLLIAKL 561
              + +  +G G FG VYKG L          VA+K L +   +    +F  E  ++ + 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 562 QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
            H N++R+ G   +    ++I EYM N +LD FL +  K         +G++ GIA G+ 
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGM- 123

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
              + +    +HRDL A N+L++ ++  K+SDFGL+R+   D     T
Sbjct: 124 --KYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT 169

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  129 bits (324), Expect = 1e-33
 Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 10/160 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQH 563
           ++F +   LG G FG V+  R   NG   A+K L        + +E   +E L+++ + H
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
             ++R+ G   +  +  +I++Y+    L   L   +++               A+  L L
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELF-SLLRKSQRFPNPVAKFY-----AAEVCLAL 117

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
            +     II+RDLK  N+LLD++ + KI+DFG A+     
Sbjct: 118 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 157

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  125 bits (316), Expect = 7e-33
 Identities = 46/179 (25%), Positives = 76/179 (42%), Gaps = 20/179 (11%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGL---------EEFKNEMLL 557
           EN+  +  LG G    V +       +E AVK +    G            E    E+ +
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 558 IAKLQ-HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           + K+  H N++++           L+ + M    L  +L   T+K  L  +    I+  +
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRAL 119

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            + +  LH   +  I+HRDLK  N+LLD DMN K++DFG +      E     + + GT
Sbjct: 120 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---KLREVCGT 172

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (317), Expect = 2e-32
 Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 15/169 (8%)

Query: 509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLV 567
           +++    +G G FG VY+ +L  +GE VA+K++             E+ ++ KL H N+V
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIV 76

Query: 568 RILGCCIEQGEK------ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLL 621
           R+       GEK       L+L+Y+P     V       K+ L        +  + + L 
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136

Query: 622 YLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLARMFGGDELQGNT 669
           Y+H +    I HRD+K  N+LLD D    K+ DFG A+     E   + 
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY 182

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  124 bits (311), Expect = 3e-32
 Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 8/164 (4%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHRN 565
           E +    K+GEG +G VYK +   GE  A+K  RL  +          E+ ++ +L+H N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 566 LVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH 625
           +V++      +   +L+ E++      +       +  L        +  +  G+ Y H 
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHD 118

Query: 626 YSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNT 669
               R++HRDLK  N+L++R+   KI+DFGLAR FG    +   
Sbjct: 119 R---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (314), Expect = 3e-32
 Identities = 32/160 (20%), Positives = 66/160 (41%), Gaps = 9/160 (5%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
           E + +   LG G FG V++     + +    K +  + G      K E+ ++   +HRN+
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNI 63

Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           + +        E ++I E++    +   +   T    L  +  +  +  + + L +LH  
Sbjct: 64  LHLHESFESMEELVMIFEFISGLDIFERIN--TSAFELNEREIVSYVHQVCEALQFLH-- 119

Query: 627 SRFRIIHRDLKASNVLLDRDMNP--KISDFGLARMFGGDE 664
               I H D++  N++     +   KI +FG AR     +
Sbjct: 120 -SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (311), Expect = 5e-32
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 26/191 (13%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL--------NGEEVAVKRLSSQ-SGQGLEEFKNEMLLI 558
           +   +   LGEG FG V     +           +VAVK L S  + + L +  +EM ++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 559 AKL-QHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLF-------------DPTKKRLL 604
             + +H+N++ +LG C + G   +I+EY    +L  +L                  +  L
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 132

Query: 605 GWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
             +  +     +A+G+ YL      + IHRDL A NVL+  D   KI+DFGLAR     +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID 189

Query: 665 LQGNTKRIVGT 675
               T      
Sbjct: 190 YYKKTTNGRLP 200

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  122 bits (308), Expect = 2e-31
 Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 8/171 (4%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEE-FKNEMLLIAKLQHR 564
            + +     LG G F  V         + VA+K ++ ++ +G E   +NE+ ++ K++H 
Sbjct: 8   RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V +       G   LI++ +    L   +    +K     +    +I  +   + YLH
Sbjct: 68  NIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRLIFQVLDAVKYLH 124

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
                    +        LD D    ISDFGL++M     +        GT
Sbjct: 125 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV---LSTACGT 172

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 3e-31
 Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 8/160 (5%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           ENF    K+GEG +G VYK R  L GE VA+K  RL +++         E+ L+ +L H 
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+V++L     + +  L+ E++                 L           + Q L  L 
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY-----LFQLLQGLA 116

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                R++HRDLK  N+L++ +   K++DFGLAR FG   
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 156

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (303), Expect = 9e-31
 Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 13/173 (7%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLS---SQSGQGLEEFKNE-MLLIAKLQ 562
           E+F +   LG+G FG V+        +  A+K L          +E    E  +L    +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 563 HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLY 622
           H  L  +      +     ++EY+    L   +                    I  GL +
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAAEIILGLQF 118

Query: 623 LHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           LH      I++RDLK  N+LLD+D + KI+DFG+ +     + + NT    GT
Sbjct: 119 LHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT--FCGT 166

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  118 bits (296), Expect = 3e-30
 Identities = 42/178 (23%), Positives = 74/178 (41%), Gaps = 15/178 (8%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS---SQSGQGLEEFKNEMLLIAKLQ 562
           ++ + +   LG GG   V+  R L    +VAVK L    ++       F+ E    A L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 563 HRNLVRILGCCIEQGEKI----LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           H  +V +      +        +++EY+   +L   +        +  +  I +I    Q
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 122

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG-GDELQGNTKRIVGT 675
            L + H   +  IIHRD+K +N+++      K+ DFG+AR           T  ++GT
Sbjct: 123 ALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 177

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (295), Expect = 8e-30
 Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 19/181 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHR 564
             +    K+G+G FG V+K R    G++VA+K++   ++          E+ ++  L+H 
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 565 NLVRILGCCIEQGEKI--------LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGI 616
           N+V ++  C  +            L+ ++  +    +   +   K  L    R+     +
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRV-----M 123

Query: 617 AQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKR--IVG 674
              L  L++  R +I+HRD+KA+NVL+ RD   K++DFGLAR F   +     +    V 
Sbjct: 124 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV 183

Query: 675 T 675
           T
Sbjct: 184 T 184

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (289), Expect = 3e-29
 Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 12/155 (7%)

Query: 515 KLGEGGFGPVYKGRLLN-GEEVAVKRLSSQSGQGLEE-----FKNEMLLIAKLQHRNLVR 568
            LGEG F  VYK R  N  + VA+K++        ++        E+ L+ +L H N++ 
Sbjct: 5   FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 64

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
           +L     +    L+ ++M                +L        +    QGL YLH +  
Sbjct: 65  LLDAFGHKSNISLVFDFMETDLEV---IIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH-- 119

Query: 629 FRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
             I+HRDLK +N+LLD +   K++DFGLA+ FG  
Sbjct: 120 -WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 153

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 4e-29
 Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 9/160 (5%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVK--RLSSQSGQGLEEFKNEMLLIAKLQHR 564
           + +    K+GEG +G V+K +     E VA+K  RL             E+ L+ +L+H+
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 565 NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLH 624
           N+VR+        +  L+ E+        F          G      +   + Q L  L 
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN------GDLDPEIVKSFLFQLLKGLG 115

Query: 625 HYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE 664
                 ++HRDLK  N+L++R+   K+++FGLAR FG   
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV 155

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  112 bits (282), Expect = 3e-28
 Identities = 33/179 (18%), Positives = 75/179 (41%), Gaps = 18/179 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL 566
            ++ +  ++GEG FG +++G  LLN ++VA+K    +S     + ++E      L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 62

Query: 567 VRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY 626
           +  +    ++G   +++  +   SL+  L      R    +      + +   +  +H  
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIHEK 120

Query: 627 SRFRIIHRDLKASNVLLDRDMNP-----KISDFGLARMFGGDELQGN-----TKRIVGT 675
               +++RD+K  N L+ R  +       + DFG+ + +     + +      K + GT
Sbjct: 121 ---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 176

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (282), Expect = 7e-28
 Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 12/172 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
            +F     LG+G FG V   R    G   A+K L  +   +   +     E  ++   +H
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
             L  +            ++EY     L   L     +  +  + R       A+ +  L
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFY--GAEIVSAL 118

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
            +     +++RD+K  N++LD+D + KI+DFGL +    D      K   GT
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGT 168

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (277), Expect = 1e-27
 Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 16/180 (8%)

Query: 506 ATENFSMECKLGEGGFGPVYKGRLL--NGEEVAVKRLSSQSGQGLEEFK-----NEMLLI 558
           A + +    ++GEG +G V+K R L   G  VA+KR+  Q+G+             +  +
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 559 AKLQHRNLVRILGCCIEQGEKILILEYMPNKSLD---VFLFDPTKKRLLGWQARIGIIEG 615
              +H N+VR+   C            +  + +D       D   +  +  +    ++  
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           + +GL +LH     R++HRDLK  N+L+      K++DFGLAR++     Q     +V T
Sbjct: 125 LLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIY---SFQMALTSVVVT 178

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 3e-27
 Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 19/176 (10%)

Query: 510 FSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEE------FKNEMLLIAKLQ 562
           + +   LG GGFG VY G  + +   VA+K +         E         E++L+ K+ 
Sbjct: 6   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65

Query: 563 --HRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
                ++R+L         +LILE              T++  L  +        + + +
Sbjct: 66  SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQVLEAV 123

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLARMFGGDELQGNTKRIVGT 675
            + H+     ++HRD+K  N+L+D +    K+ DFG   +              GT
Sbjct: 124 RHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----VYTDFDGT 172

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 4e-27
 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 15/168 (8%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLS----SQSGQGLEEFKNEMLLIA 559
           ENF +   LG G +G V+  R +     G+  A+K L      Q  +  E  + E  ++ 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 560 KLQHR-NLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
            ++    LV +      + +  LIL+Y+    L   L    +      Q  +       +
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV------GE 137

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ 666
            +L L H  +  II+RD+K  N+LLD + +  ++DFGL++ F  DE +
Sbjct: 138 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 185

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 4e-27
 Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 20/179 (11%)

Query: 508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRL------SSQSGQGLEEFKNEMLLIAK 560
           + +    +LG G F  V K R    G + A K +      SS+ G   E+ + E+ ++ +
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 561 LQHRNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
           +QH N++ +      + + ILILE +    L        +K  L  +     ++ I  G 
Sbjct: 70  IQHPNVITLHEVYENKTDVILILELVAGGELF---DFLAEKESLTEEEATEFLKQILNG- 125

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNP----KISDFGLARMFGGDELQGNTKRIVGT 675
             +++    +I H DLK  N++L     P    KI DFGLA            K I GT
Sbjct: 126 --VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE---FKNIFGT 179

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 7e-26
 Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 17/165 (10%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRL--SSQSGQGLEEFKNEMLLIAKLQHR 564
             +     +G G +G V        G +VA+K+L    QS    +    E+ L+  ++H 
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 565 NLVRILGCCIEQG------EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N++ +L             +  L++ +M      +      K   LG      ++  + +
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM-----KHEKLGEDRIQFLVYQMLK 132

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           GL Y+H      IIHRDLK  N+ ++ D   KI DFGLAR    +
Sbjct: 133 GLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 174

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  107 bits (267), Expect = 9e-26
 Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 10/160 (6%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQH 563
           + F     LG G FG V   +   +G   A+K L  Q     + +E   NE  ++  +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 564 RNLVRILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
             LV++     +     +++EY+    +   L    +               I     YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157

Query: 624 HHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD 663
           H      +I+RDLK  N+L+D+    +++DFG A+   G 
Sbjct: 158 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (264), Expect = 2e-25
 Identities = 36/158 (22%), Positives = 64/158 (40%), Gaps = 18/158 (11%)

Query: 516 LGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCC 573
           LG G  G V +       E+ A+K L         + + E+ L  +  Q  ++VRI+   
Sbjct: 20  LGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVY 74

Query: 574 ----IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRF 629
                 +   ++++E +    L   + D   +     +A   I++ I + + YLH     
Sbjct: 75  ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE-IMKSIGEAIQYLH---SI 130

Query: 630 RIIHRDLKASNVLLDRDMNP---KISDFGLARMFGGDE 664
            I HRD+K  N+L          K++DFG A+      
Sbjct: 131 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 168

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  104 bits (261), Expect = 2e-25
 Identities = 38/175 (21%), Positives = 71/175 (40%), Gaps = 16/175 (9%)

Query: 510 FSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           + +  K+G G FG +Y G  +  GEEVA+K    ++     +   E  +   +Q    + 
Sbjct: 9   YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIP 66

Query: 569 ILGCCIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSR 628
            +  C  +G+  +++  +   SL+         R    +  + + + +   + Y+H    
Sbjct: 67  TIRWCGAEGDYNVMVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIH---S 121

Query: 629 FRIIHRDLKASNVL---LDRDMNPKISDFGLARMFGGDELQGN-----TKRIVGT 675
              IHRD+K  N L     +     I DFGLA+ +       +      K + GT
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGT 176

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  104 bits (261), Expect = 3e-25
 Identities = 37/173 (21%), Positives = 75/173 (43%), Gaps = 20/173 (11%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRN 565
           +++ +  KLG G +  V++   + N E+V VK L        ++ K E+ ++  L+   N
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPN 91

Query: 566 LVRILGCCIEQGEK--ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYL 623
           ++ +     +   +   L+ E++ N            + L  +  R   +  I + L Y 
Sbjct: 92  IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRF-YMYEILKALDYC 145

Query: 624 HHYSRFRIIHRDLKASNVLLDRD-MNPKISDFGLARMFGGDELQGNTKRIVGT 675
           H      I+HRD+K  NV++D +    ++ D+GLA  +   +        V +
Sbjct: 146 HS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVAS 192

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 99.9 bits (248), Expect = 8e-25
 Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 28/158 (17%)

Query: 515 KLGEGGFGPVYKGRLLNGEEVAVK--RLSSQSGQ--------GLEEFKNEMLLIAKLQHR 564
            +GEG    V+        E  VK  ++   S +        G   F    +  A+ + R
Sbjct: 7   LMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR 66

Query: 565 NLVRILGCCI----EQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGL 620
            L ++ G  +          +++E +  K          +   +  +    +++ I + +
Sbjct: 67  ALQKLQGLAVPKVYAWEGNAVLMELIDAK----------ELYRVRVENPDEVLDMILEEV 116

Query: 621 LYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR 658
              +H     I+H DL   NVL+  +    I DF  + 
Sbjct: 117 AKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFPQSV 150

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 92.3 bits (229), Expect = 4e-23
 Identities = 22/118 (18%), Positives = 49/118 (41%), Gaps = 13/118 (11%)

Query: 35  IRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTIS 94
           + +GE L  + Q  ++  +     +   L ++      T VW +N             + 
Sbjct: 4   LTNGEGL-YAGQSLDVEPYHFIMQEDCNLVLYDH---STSVWASNTGILG-KKGCKAVLQ 58

Query: 95  NNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDY 152
           ++G  V+ +    ++W++++     N V  L++DGN+VI  +         +W +  Y
Sbjct: 59  SDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD--------IWSTGTY 108

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.0 bits (243), Expect = 8e-23
 Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 15/163 (9%)

Query: 507 TENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS--SQSGQGLEEFKNEMLLIAKLQH 563
            E +     +G G +G V        G  VAVK+LS   QS    +    E+ L+  ++H
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76

Query: 564 RNLVRILGCC-----IEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
            N++ +L        +E+   + ++ ++    L+    +  K + L       +I  I +
Sbjct: 77  ENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN----NIVKCQKLTDDHVQFLIYQILR 132

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG 661
           GL Y+H      IIHRDLK SN+ ++ D   KI DFGLAR   
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.1 bits (243), Expect = 8e-23
 Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 21/177 (11%)

Query: 508 ENFSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLS--SQSGQGLEEFKNEMLLIAKLQHR 564
           + +     +G G  G V      +    VA+K+LS   Q+    +    E++L+  + H+
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 565 NLVRILGCCIEQG------EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQ 618
           N++ +L     Q       +  L++E M      V   +         +    ++  +  
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD------HERMSYLLYQMLC 130

Query: 619 GLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT 675
           G+ +LH      IIHRDLK SN+++  D   KI DFGLAR  G   +       V T
Sbjct: 131 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVT 181

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 83.5 bits (205), Expect = 8e-18
 Identities = 33/180 (18%), Positives = 67/180 (37%), Gaps = 18/180 (10%)

Query: 510 FSMECKLGEGGFGPVYKGR-LLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVR 568
           + +  KLG G F  V+  + ++N   VA+K +        E  ++E+ L+ ++   +  +
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTK 73

Query: 569 ILGCCIEQGEKIL-------------ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEG 615
                     K+L             ++ +       + L    + R +       I + 
Sbjct: 74  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 133

Query: 616 IAQGLLYLHHYSRFRIIHRDLKASNVLLDR-DMNPKISDFGLARMFGGDELQGNTKRIVG 674
           +  GL Y+H   R  IIH D+K  NVL++  D    +    +A +        +    + 
Sbjct: 134 LLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQ 191

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 73.4 bits (180), Expect = 2e-16
 Identities = 16/97 (16%), Positives = 37/97 (38%), Gaps = 9/97 (9%)

Query: 65  IWFRKVP-DTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVA 123
           I +     D      +  + +      L++  +  LVL ++ +  +WSTN + +     A
Sbjct: 12  ILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCRA 70

Query: 124 QLRDDGNLVIRDNSSVNTTENYLWQSFD--YPTDTLL 158
            L+ +G + +  N +       +W S +       + 
Sbjct: 71  VLQPNGRMDVLTNQN-----IAVWTSGNSRSAGRYVF 102

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 69.3 bits (169), Expect = 4e-15
 Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 20/126 (15%)

Query: 27  DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISD 86
           + +     +  GE L  +   F              L ++     D  +W  N       
Sbjct: 2   NILYSGETLSTGEFL--NYGSFVFIMQEDCN-----LVLYD---VDKPIWATNTGGLSR- 50

Query: 87  HNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYL 146
            +  L++  +G LV+ N +N  IW++N   +  N V  L+ D N+VI             
Sbjct: 51  -SCFLSMQTDGNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVIYGTD--------R 101

Query: 147 WQSFDY 152
           W +  +
Sbjct: 102 WATGTH 107

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 1/77 (1%)

Query: 84  ISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTE 143
           ++  + V  +  +  LVL +  +  IW+TN    +++    ++ DGNLV+ + S+     
Sbjct: 16  LNYGSFVFIMQEDCNLVLYDV-DKPIWATNTGGLSRSCFLSMQTDGNLVVYNPSNKPIWA 74

Query: 144 NYLWQSFDYPTDTLLQD 160
           +            L +D
Sbjct: 75  SNTGGQNGNYVCILQKD 91

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 68.7 bits (167), Expect = 9e-15
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 18/130 (13%)

Query: 26  ADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPIS 85
           +D +     +  G  L      +     +                 +  VW +  +   S
Sbjct: 1   SDRLNSGHQLDTGGSLAEG--GYLFIIQNDCNLVLYD--------NNRAVWASGTNGKAS 50

Query: 86  DHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENY 145
               VL + N+G LV+ + +   IW++N + +  N    L+ D N+VI DNS+     N 
Sbjct: 51  --GCVLKMQNDGNLVIYSGSR-AIWASNTNRQNGNYYLILQRDRNVVIYDNSN-----NA 102

Query: 146 LWQSFDYPTD 155
           +W +     +
Sbjct: 103 IWATHTNVGN 112

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 68.1 bits (166), Expect = 2e-14
 Identities = 18/112 (16%), Positives = 42/112 (37%), Gaps = 18/112 (16%)

Query: 41  LVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLV 100
           ++  +  +     +        L ++     +  +W  N       +     +  +G LV
Sbjct: 25  ILFGTHVYRFIMQTDCN-----LVLY---DNNNPIWATNTGGL--GNGCRAVLQPDGVLV 74

Query: 101 LLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDY 152
           ++   N T+W +  + +A + V  L+ D N+VI  ++        LW +   
Sbjct: 75  VITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYGDA--------LWATQTV 118

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 55.3 bits (133), Expect = 4e-10
 Identities = 17/116 (14%), Positives = 29/116 (25%), Gaps = 39/116 (33%)

Query: 65  IWF-RKVPDTVVWVANRDRPISDHNAVLTISNNGKLV----------------------- 100
           I F      +     +  + +   +   T+ ++  LV                       
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDSDVRVWASNTAGATGCRAVL 62

Query: 101 -------LLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQS 149
                  +L   N   WS+       N V  L+ D  + I            LW S
Sbjct: 63  QSDGLLVILTAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYGPG--------LWDS 110

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	675
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.97
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.97
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.97
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.97
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.97
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.97
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.97
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.97
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.97
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.97
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.97
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.96
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.96
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.96
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.96
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.96
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.96
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.96
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.96
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.96
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.96
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.96
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.96
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.96
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.96
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.96
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.95
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.95
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.95
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.95
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.95
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.95
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.94
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.94
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.94
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.94
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.94
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.94
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.93
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.93
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.93
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.93
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.92
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.92
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.86
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	99.85
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.83
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.83
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.83
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.72
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.62
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.6
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.4
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.15
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.12
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.06
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	98.98
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	98.79
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.58
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.98
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.46
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.96
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.6
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	95.24
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	92.81
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	86.24
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	85.18
d1dx5i2	35	Thrombomodulin, different EGF-like domains {Human	82.18
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	81.29

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-33  Score=284.26  Aligned_cols=163  Identities=31%  Similarity=0.410  Sum_probs=140.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||+||+|+.. +++.||||++.... ....+++.+|+.++++++|||||++++++.+++..+||||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            367999999999999999999874 68999999997543 3345679999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+++|+|.+++.   ....+++.++..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+.+..+.
T Consensus        84 y~~gg~L~~~l~---~~~~l~e~~~~~i~~qi~~al~ylH~~~---IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~  157 (271)
T d1nvra_          84 YCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  157 (271)
T ss_dssp             CCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             ccCCCcHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHcC---CccCcccHHHEEECCCCCEEEccchhheeeccCC
Confidence            999999999984   3456899999999999999999999988   9999999999999999999999999999886554


Q ss_pred             ccCCCCceecC
Q 005825          665 LQGNTKRIVGT  675 (675)
Q Consensus       665 ~~~~~~~~~GT  675 (675)
                      ........+||
T Consensus       158 ~~~~~~~~~GT  168 (271)
T d1nvra_         158 RERLLNKMCGT  168 (271)
T ss_dssp             EECCBCCCCSC
T ss_pred             ccccccceeeC
Confidence            44444456776

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.7e-32  Score=277.98  Aligned_cols=159  Identities=27%  Similarity=0.443  Sum_probs=141.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      ++|++.++||+|+||+||+|+. .+|+.||||+++.......+.+.+|+.++++++|||||++++++.+.+..++||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            5799999999999999999986 469999999998665566788999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCccc
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDELQ  666 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~~~  666 (675)
                      ++|+|.+++..    ..+++.+...++.||+.||+|||+++   |+||||||+|||++.++++||+|||+|+.+..+...
T Consensus       100 ~gg~L~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~  172 (293)
T d1yhwa1         100 AGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  172 (293)
T ss_dssp             TTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred             CCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCcHHHeEECCCCcEeeccchhheeecccccc
Confidence            99999998742    35899999999999999999999998   999999999999999999999999999988654432


Q ss_pred             CCCCceecC
Q 005825          667 GNTKRIVGT  675 (675)
Q Consensus       667 ~~~~~~~GT  675 (675)
                        ....+||
T Consensus       173 --~~~~~gt  179 (293)
T d1yhwa1         173 --RSTMVGT  179 (293)
T ss_dssp             --BCCCCSC
T ss_pred             --ccccccC
Confidence              2234565

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.2e-32  Score=277.33  Aligned_cols=152  Identities=32%  Similarity=0.574  Sum_probs=132.4

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.++||+|+||+||+|++.+++.||||+++. .....++|.+|+.++++++|||||+++|+|.+++..++||||+
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~-~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~   82 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   82 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCS-SSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECC-CcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEec
Confidence            368999999999999999999998889999999986 3455678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ++|+|.+++..  ....+++..++.|+.|||+||+|||+++   |+||||||+||||++++.+||+|||+|+.+....
T Consensus        83 ~~g~L~~~l~~--~~~~~~~~~~~~i~~qia~gl~~lH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~  155 (263)
T d1sm2a_          83 EHGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  155 (263)
T ss_dssp             TTCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCTTCSGGGEEECGGGCEEECSCC---------
T ss_pred             CCCcHHHHhhc--cccCCCHHHHHHHHHHHHHHHHhhhccc---eeecccchhheeecCCCCeEecccchheeccCCC
Confidence            99999999854  3456889999999999999999999987   9999999999999999999999999999885543

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1e-32  Score=283.24  Aligned_cols=154  Identities=32%  Similarity=0.527  Sum_probs=139.0

Q ss_pred             hcCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          506 ATENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       506 ~~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ..++|++.++||+|+||+||+|++. +++.||||+++.. ....++|++|+.+|++++|||||+++++|.+++..++|||
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E   93 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   93 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEee
Confidence            3468999999999999999999875 4889999999753 4456789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+++|+|.+++... ....+++..++.|+.||++||+|||+++   |+||||||+||||++++.+||+|||+|+.+..+.
T Consensus        94 ~~~~g~l~~~l~~~-~~~~~~~~~~~~i~~qi~~gL~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~  169 (287)
T d1opja_          94 FMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  169 (287)
T ss_dssp             CCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS
T ss_pred             cccCcchHHHhhhc-cccchHHHHHHHHHHHHHHHHHHHHHCC---cccCccccCeEEECCCCcEEEccccceeecCCCC
Confidence            99999999998643 3456899999999999999999999987   9999999999999999999999999999886554

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5e-32  Score=275.98  Aligned_cols=152  Identities=35%  Similarity=0.545  Sum_probs=135.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.++||+|+||+||+|++.+++.||||+++.. ....++|.+|+.++++++|||||+++|++.+ +..++||||+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~   89 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM   89 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence            4688999999999999999999988899999999753 4456789999999999999999999998754 5679999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ++|+|.+++... ....+++..++.|+.||++||.|||+++   |+||||||+||||++++.+||+|||+|+.+...+
T Consensus        90 ~~g~L~~~~~~~-~~~~l~~~~~~~i~~qi~~gl~~lH~~~---ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~  163 (272)
T d1qpca_          90 ENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (272)
T ss_dssp             TTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             CCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccchhheeeecccceeeccccceEEccCCc
Confidence            999999987542 2335899999999999999999999987   9999999999999999999999999999986554

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.9e-32  Score=278.78  Aligned_cols=150  Identities=28%  Similarity=0.460  Sum_probs=137.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      +.|++.++||+|+||+||+|+.. +++.||||+++.......+.|.+|+.++++++|||||++++++.+.+..++||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            57899999999999999999874 58999999998766677789999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ++|+|.+++.+  ....+++.++..++.||+.||.|||+++   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus        92 ~~g~L~~~~~~--~~~~l~e~~~~~i~~qi~~gL~ylH~~~---ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~  162 (288)
T d2jfla1          92 AGGAVDAVMLE--LERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTR  162 (288)
T ss_dssp             TTEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECHH
T ss_pred             CCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEEeecChhheeECCCCCEEEEechhhhccCC
Confidence            99999998743  2346899999999999999999999998   99999999999999999999999999987643

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7e-32  Score=276.76  Aligned_cols=162  Identities=30%  Similarity=0.418  Sum_probs=138.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.+.||+|+||+||+|+.. +++.||||++++.   .....+.+.+|++++++++|||||++++++.+.+..++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            57999999999999999999874 6899999999743   2345678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++|+|.+++.   ..+.+++.....++.|++.||+|||+++   |+||||||+|||+++++.+||+|||+|+.+..+
T Consensus        88 Ey~~gg~L~~~~~---~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~  161 (288)
T d1uu3a_          88 SYAKNGELLKYIR---KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  161 (288)
T ss_dssp             CCCTTEEHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             EccCCCCHHHhhh---ccCCCCHHHHHHHHHHHHHHHHhhcccc---EEcCcCCccccccCCCceEEecccccceecccC
Confidence            9999999999884   3456899999999999999999999998   999999999999999999999999999998655


Q ss_pred             cccCCCCceecC
Q 005825          664 ELQGNTKRIVGT  675 (675)
Q Consensus       664 ~~~~~~~~~~GT  675 (675)
                      .........+||
T Consensus       162 ~~~~~~~~~~GT  173 (288)
T d1uu3a_         162 SKQARANSFVGT  173 (288)
T ss_dssp             --------CCCC
T ss_pred             CcccccccccCC
Confidence            444444455676

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.1e-32  Score=277.02  Aligned_cols=161  Identities=33%  Similarity=0.492  Sum_probs=131.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||+||+|+..  ..||||+++..  .....++|++|+.++++++|||||++++++.+ ++.++|||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence            467889999999999999999864  36999999753  34456789999999999999999999998754 56899999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+++|+|.+++...  ...+++..++.|+.|||+||+|||+++   ||||||||+||||++++.+||+|||+|+......
T Consensus        84 y~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~gl~yLH~~~---ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~  158 (276)
T d1uwha_          84 WCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS  158 (276)
T ss_dssp             CCCEEEHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTSSEEECCCCCSCC-----
T ss_pred             cCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCC---EeccccCHHHEEEcCCCCEEEccccceeeccccC
Confidence            99999999999643  345899999999999999999999987   9999999999999999999999999999886544


Q ss_pred             ccCCCCceecC
Q 005825          665 LQGNTKRIVGT  675 (675)
Q Consensus       665 ~~~~~~~~~GT  675 (675)
                      ......++.||
T Consensus       159 ~~~~~~~~~gt  169 (276)
T d1uwha_         159 GSHQFEQLSGS  169 (276)
T ss_dssp             -------CCCC
T ss_pred             CcccccccccC
Confidence            33334445565

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-31  Score=271.17  Aligned_cols=150  Identities=31%  Similarity=0.412  Sum_probs=136.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.+.||+|+||+||+|+.. +++.||||++.+.   .....+.+.+|+.++++++|||||++++++.+++..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            57999999999999999999875 5899999998642   2345678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++|+|.+++.   ....+++..+..|+.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+.....
T Consensus        86 Ey~~~g~L~~~l~---~~~~l~e~~~~~i~~qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~  159 (263)
T d2j4za1          86 EYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  159 (263)
T ss_dssp             ECCTTCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred             eecCCCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeeeeccccceecCCCCEeecccceeeecCCC
Confidence            9999999999984   3456899999999999999999999987   999999999999999999999999999877544

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.8e-32  Score=283.00  Aligned_cols=150  Identities=26%  Similarity=0.335  Sum_probs=135.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+.+|++++|||||++++++.++++.++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            578999999999999999999874 68999999997643 3345679999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-CCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-SRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |+++|+|.+++.   +...+++..+..++.|++.||.|||++ +   |+||||||+||||++++++||+|||+|+.+..
T Consensus        85 y~~gg~L~~~l~---~~~~l~~~~~~~~~~qil~aL~yLH~~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  157 (322)
T d1s9ja_          85 HMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID  157 (322)
T ss_dssp             CCTTEEHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred             cCCCCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEccccCHHHeeECCCCCEEEeeCCCccccCC
Confidence            999999999994   345689999999999999999999975 6   99999999999999999999999999997743

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.4e-31  Score=267.43  Aligned_cols=152  Identities=30%  Similarity=0.494  Sum_probs=138.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      .++|++.++||+|+||+||+|+.+++++||||+++.. ....++|++|+.++++++||||++++|+|.+++..++||||+
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcC-cCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            3688999999999999999999988899999999863 445678999999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ++|+|..++..  ....+++..++.++.||++||+|||+++   |+||||||+|||+++++.+||+|||+|+.+...+
T Consensus        82 ~~g~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~~LH~~~---iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~  154 (258)
T d1k2pa_          82 ANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  154 (258)
T ss_dssp             TTEEHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHTT---BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS
T ss_pred             CCCcHHHhhhc--cccCCcHHHHHHHHHHHHHHHHHHhhcC---cccccccceeEEEcCCCcEEECcchhheeccCCC
Confidence            99999999754  3456889999999999999999999987   9999999999999999999999999999876544

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.3e-31  Score=276.58  Aligned_cols=152  Identities=33%  Similarity=0.560  Sum_probs=126.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-C---cEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-G---EEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g---~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ++|++.++||+|+||+||+|+... +   ..||||++... .....++|.+|+.+|++++|||||+++|++.+++..++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            568888999999999999998743 3   36899998754 334457899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++|+|.+++...  ...++|.+++.|+.|||+||+|||+++   |+||||||+||||++++++||+|||+|+.+..
T Consensus       106 ~Ey~~~g~L~~~~~~~--~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             EECCTTEEHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEecCCCcceeeeccc--cCCCCHHHHHHHHHHHHHHHHHHhhCC---CccCccccceEEECCCCcEEECCcccceEccC
Confidence            9999999999988542  346899999999999999999999987   99999999999999999999999999998865


Q ss_pred             Cc
Q 005825          663 DE  664 (675)
Q Consensus       663 ~~  664 (675)
                      ..
T Consensus       181 ~~  182 (299)
T d1jpaa_         181 DT  182 (299)
T ss_dssp             --
T ss_pred             CC
Confidence            43

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=270.78  Aligned_cols=157  Identities=27%  Similarity=0.441  Sum_probs=126.7

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEe--CCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIE--QGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~--~~~~~lV  582 (675)
                      ++|++.+.||+|+||+||+|+.. +|+.||||.++...  ....+.+.+|+.++++++|||||++++++.+  .+..++|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            67999999999999999999874 68999999997542  2345679999999999999999999999975  3468999


Q ss_pred             EEecCCCCHHHHhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhcC--CCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          583 LEYMPNKSLDVFLFDP-TKKRLLGWQARIGIIEGIAQGLLYLHHYS--RFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      |||+++|+|.+++... .....+++..++.++.||+.||+|||+++  ..+||||||||+||||++++.+||+|||+|+.
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence            9999999999998532 22456899999999999999999999865  23599999999999999999999999999998


Q ss_pred             cCCCc
Q 005825          660 FGGDE  664 (675)
Q Consensus       660 ~~~~~  664 (675)
                      +..+.
T Consensus       164 ~~~~~  168 (269)
T d2java1         164 LNHDT  168 (269)
T ss_dssp             C----
T ss_pred             cccCC
Confidence            86543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.97  E-value=1.5e-30  Score=274.06  Aligned_cols=153  Identities=23%  Similarity=0.402  Sum_probs=137.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .++|++.++||+|+||+||+|+.. +|+.||||++........+.+.+|+.+|++++|||||++++++.+.+..+|||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            358999999999999999999874 6899999999876555667899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc--CCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD--RDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~--~~~~~kl~DFGla~~~~~~  663 (675)
                      +++|+|.+++..  ....+++..+..|+.||+.||+|||+++   ||||||||+|||++  .++.+||+|||+|+.+...
T Consensus       105 ~~gg~L~~~l~~--~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~  179 (350)
T d1koaa2         105 MSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  179 (350)
T ss_dssp             CCSCBHHHHHTC--TTSCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT
T ss_pred             CCCCCHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeeeeechhHeeeccCCCCeEEEeecchheecccc
Confidence            999999999853  2346899999999999999999999998   99999999999995  4678999999999988654


Q ss_pred             c
Q 005825          664 E  664 (675)
Q Consensus       664 ~  664 (675)
                      .
T Consensus       180 ~  180 (350)
T d1koaa2         180 Q  180 (350)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-30  Score=266.74  Aligned_cols=152  Identities=31%  Similarity=0.528  Sum_probs=132.0

Q ss_pred             cCCcceee-eeCCcCceeEEEEEEc---CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMEC-KLGEGGFGPVYKGRLL---NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~-~IG~G~fG~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|.+.+ +||+|+||+||+|.+.   ++..||||+++... ....++|.+|+++|++++|||||+++|++.. +..+|
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l   85 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML   85 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEE
Confidence            35677777 4999999999999764   35589999997643 3346789999999999999999999999864 56899


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++|+|.+++..  ....+++..+..|+.||++||+|||+++   |+||||||+||||++++.+||+|||+|+.+.
T Consensus        86 vmE~~~~g~L~~~l~~--~~~~l~~~~~~~i~~qi~~gL~ylH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~  160 (285)
T d1u59a_          86 VMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALG  160 (285)
T ss_dssp             EEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             EEEeCCCCcHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCcCchhheeeccCCceeeccchhhhccc
Confidence            9999999999999843  2346899999999999999999999987   9999999999999999999999999999886


Q ss_pred             CCc
Q 005825          662 GDE  664 (675)
Q Consensus       662 ~~~  664 (675)
                      ..+
T Consensus       161 ~~~  163 (285)
T d1u59a_         161 ADD  163 (285)
T ss_dssp             TCS
T ss_pred             ccc
Confidence            543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.6e-31  Score=270.22  Aligned_cols=151  Identities=33%  Similarity=0.558  Sum_probs=132.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecC
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMP  587 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~  587 (675)
                      ++|++.+.||+|+||+||+|++.+++.||||+++. .....++|.+|+.++++++|||||+++|+|.+ ++.++||||++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~   94 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS   94 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCT-TSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECc-ccCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecC
Confidence            67999999999999999999998888999999975 34556789999999999999999999999854 56889999999


Q ss_pred             CCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          588 NKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       588 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      +|+|..++... ....++|.+++.|+.||++||+|||+++   |+||||||+||||++++.+||+|||+|+.+....
T Consensus        95 ~g~l~~~~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~---ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~  167 (285)
T d1fmka3          95 KGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE  167 (285)
T ss_dssp             TCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred             CCchhhhhhhc-ccccchHHHHHHHHHHHHHHHHHHhhhh---eecccccceEEEECCCCcEEEcccchhhhccCCC
Confidence            99999988542 2346899999999999999999999987   9999999999999999999999999999875444

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.6e-31  Score=273.80  Aligned_cols=166  Identities=31%  Similarity=0.429  Sum_probs=136.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC------CcEEEEEEecCc-CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN------GEEVAVKRLSSQ-SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~------g~~vAvK~l~~~-~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~  578 (675)
                      .++|++.++||+|+||+||+|+...      ...||||.+... .......|.+|+.++.++ +|||||++++++.+.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            4689999999999999999998643      236999998754 334557899999999998 89999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCC--------------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCC
Q 005825          579 KILILEYMPNKSLDVFLFDPTK--------------------KRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKA  638 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp  638 (675)
                      .++||||+++|+|.+++.....                    ...+++..++.|+.||++||+|||+++   ||||||||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~---IiHRDlKp  192 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAA  192 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCch
Confidence            9999999999999999964321                    235899999999999999999999987   99999999


Q ss_pred             CCEEEcCCCCeEEeeeccceecCCCcccCCCCceecC
Q 005825          639 SNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       639 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~GT  675 (675)
                      +|||++.++.+||+|||+|+............+..||
T Consensus       193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt  229 (325)
T d1rjba_         193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP  229 (325)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEEC
T ss_pred             hccccccCCeEEEeeccccccccCCCceeeeccccCC
Confidence            9999999999999999999987655433323334444

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-30  Score=273.60  Aligned_cols=161  Identities=26%  Similarity=0.328  Sum_probs=141.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      .++|++.+.||+|+||+||+|+. .+++.||||++++.   .....+.+.+|+.+|++++||||+++++++.+.+..++|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            36799999999999999999987 46999999999753   234567899999999999999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++|+|.+++.   +...+++.....++.||+.||+|||+++   ||||||||+|||+++++.+||+|||+|+.+..
T Consensus        84 ~ey~~gg~L~~~~~---~~~~~~e~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_          84 MEYANGGELFFHLS---RERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EECCTTCBHHHHHH---HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             eeccCCCchhhhhh---cccCCcHHHHHHHHHHHhhhhhhhhhcC---ccccccCHHHeEecCCCCEEEeeccccccccc
Confidence            99999999999984   3456888999999999999999999998   99999999999999999999999999998754


Q ss_pred             CcccCCCCceecC
Q 005825          663 DELQGNTKRIVGT  675 (675)
Q Consensus       663 ~~~~~~~~~~~GT  675 (675)
                      ...  .....+||
T Consensus       158 ~~~--~~~~~~GT  168 (337)
T d1o6la_         158 DGA--TMKTFCGT  168 (337)
T ss_dssp             TTC--CBCCCEEC
T ss_pred             CCc--ccccceeC
Confidence            432  23346776

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.97  E-value=2e-30  Score=273.38  Aligned_cols=152  Identities=26%  Similarity=0.387  Sum_probs=137.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEec
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYM  586 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~  586 (675)
                      ++|++.++||+|+||+||+|+. .+|+.||||+++.......+.+.+|+.+|++++|||||++++++.+++..+|||||+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            5799999999999999999987 469999999998655555678899999999999999999999999999999999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc--CCCCeEEeeeccceecCCCc
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD--RDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~--~~~~~kl~DFGla~~~~~~~  664 (675)
                      ++|+|.+++..  ....+++.+...|+.||+.||+|||+++   |+||||||+||||+  .++.+||+|||+|+.+..++
T Consensus       109 ~gg~L~~~~~~--~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~  183 (352)
T d1koba_         109 SGGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE  183 (352)
T ss_dssp             CCCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred             CCChHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccccccccccccCCCeEEEeecccceecCCCC
Confidence            99999888743  3346899999999999999999999988   99999999999998  67899999999999986654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-30  Score=266.00  Aligned_cols=144  Identities=33%  Similarity=0.502  Sum_probs=125.4

Q ss_pred             eeeCCcCceeEEEEEEcC---CcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEecCC
Q 005825          514 CKLGEGGFGPVYKGRLLN---GEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEYMPN  588 (675)
Q Consensus       514 ~~IG~G~fG~Vy~~~~~~---g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey~~~  588 (675)
                      ++||+|+||+||+|.+.+   ++.||||+++...  ....++|.+|+.++++++|||||+++|+|.. +..+|||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            479999999999998643   4689999997532  3345689999999999999999999999864 567899999999


Q ss_pred             CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          589 KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       589 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+|.+++.   ....+++..++.|+.||++||+|||+++   |+||||||+||||+.++.+||+|||+|+.+....
T Consensus        92 g~L~~~l~---~~~~l~~~~~~~i~~qi~~gl~ylH~~~---iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~  161 (277)
T d1xbba_          92 GPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  161 (277)
T ss_dssp             EEHHHHHH---HCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             CcHHHHHh---hccCCCHHHHHHHHHHHHHHHhhHHhCC---cccCCCcchhhcccccCcccccchhhhhhccccc
Confidence            99999984   3456899999999999999999999987   9999999999999999999999999999886543

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-30  Score=263.88  Aligned_cols=149  Identities=30%  Similarity=0.442  Sum_probs=128.5

Q ss_pred             ceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe----CCeEEEEE
Q 005825          511 SMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE----QGEKILIL  583 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~----~~~~~lV~  583 (675)
                      ++.++||+|+||+||+|+.. +++.||+|++...  .....+.|.+|+++|++++|||||++++++.+    ....++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            66778999999999999875 5889999998753  23345679999999999999999999999875    34579999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc-CCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD-RDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~-~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++|+|.+++.   +...+++.++..++.||++||+|||+++ .+|+||||||+||||+ +++.+||+|||+|+....
T Consensus        92 E~~~~g~L~~~l~---~~~~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          92 ELMTSGTLKTYLK---RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             ECCCSCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCcHHHHHh---ccccccHHHHHHHHHHHHHHHHHHHHCC-CCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            9999999999994   3456899999999999999999999874 4599999999999996 578999999999987644


Q ss_pred             C
Q 005825          663 D  663 (675)
Q Consensus       663 ~  663 (675)
                      .
T Consensus       168 ~  168 (270)
T d1t4ha_         168 S  168 (270)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.1e-30  Score=270.50  Aligned_cols=149  Identities=33%  Similarity=0.520  Sum_probs=133.4

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ..|+..++||+|+||+||+|+. .+++.||||+++....   ...+.+.+|+.+|++++|||||++++++.+++..++||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            3589999999999999999986 4688999999975432   23457899999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      ||+++|+|+.++.   ....+++.++..|+.||+.||.|||+++   |+||||||+||||++++.+||+|||+|+....
T Consensus        95 E~~~~g~l~~~~~---~~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          95 EYCLGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             ECCSEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             EecCCCchHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            9999999987763   3456899999999999999999999998   99999999999999999999999999997654

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=3.4e-30  Score=262.66  Aligned_cols=152  Identities=28%  Similarity=0.362  Sum_probs=136.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCcc---------CHHHHHHHHHHHHhcC-CCceeeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQ---------GLEEFKNEMLLIAKLQ-HRNLVRILGCCIE  575 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~---------~~~~f~~E~~il~~l~-H~nIv~l~g~~~~  575 (675)
                      .++|++.++||+|+||+||+|+. .+++.||||++++....         ..+.+.+|+.++++++ ||||+++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            36899999999999999999987 46899999999754221         1246889999999997 9999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      ++..+|||||+++|+|.+++.   ....+++.++..++.||++||+|||+++   |+||||||+|||+++++.+||+|||
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~---~~~~l~e~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~~kl~DFG  155 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLT---EKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFG  155 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCT
T ss_pred             CcceEEEEEcCCCchHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHcC---CcccccccceEEEcCCCCeEEccch
Confidence            999999999999999999994   3456899999999999999999999998   9999999999999999999999999


Q ss_pred             cceecCCCc
Q 005825          656 LARMFGGDE  664 (675)
Q Consensus       656 la~~~~~~~  664 (675)
                      +|+.+....
T Consensus       156 ~a~~~~~~~  164 (277)
T d1phka_         156 FSCQLDPGE  164 (277)
T ss_dssp             TCEECCTTC
T ss_pred             heeEccCCC
Confidence            999886543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=1.6e-30  Score=269.14  Aligned_cols=160  Identities=26%  Similarity=0.369  Sum_probs=123.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .+.|++.++||+|+||+||+|+.. +++.||||++.... ....+.+.+|+.++++++|||||++++++.+++..+||||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            467999999999999999999875 58999999997543 2334568899999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc---CCCCeEEeeeccceecC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFG  661 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DFGla~~~~  661 (675)
                      |+++|+|.+++..   ...+++.+...++.||+.||+|||+++   |+||||||+|||+.   +++.+||+|||+|+...
T Consensus        88 ~~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~  161 (307)
T d1a06a_          88 LVSGGELFDRIVE---KGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED  161 (307)
T ss_dssp             CCCSCBHHHHHHT---CSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCC-------
T ss_pred             ccCCCcHHHhhhc---ccCCCHHHHHHHHHHHHHHHHhhhhce---eeeEEecccceeecccCCCceEEEeccceeEEcc
Confidence            9999999999953   456899999999999999999999998   99999999999994   57899999999999875


Q ss_pred             CCcccCCCCceecC
Q 005825          662 GDELQGNTKRIVGT  675 (675)
Q Consensus       662 ~~~~~~~~~~~~GT  675 (675)
                      ..+.   ....+||
T Consensus       162 ~~~~---~~~~~GT  172 (307)
T d1a06a_         162 PGSV---LSTACGT  172 (307)
T ss_dssp             --------------
T ss_pred             CCCe---eeeeeeC
Confidence            5432   2234565

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2e-30  Score=265.69  Aligned_cols=153  Identities=33%  Similarity=0.569  Sum_probs=129.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCC-----cEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNG-----EEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g-----~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      .+.|+..++||+|+||+||+|++.+.     ..||||+++... .....+|.+|+.++++++|||||+++|++.+.+..+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            35788899999999999999987542     479999997543 334567999999999999999999999999999999


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||++++++.+++..  ....+++.+++.++.||+.||+|||+++   |+||||||+||||++++.+||+|||+|+.+
T Consensus        86 ~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~~i~~gl~~lH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  160 (283)
T d1mqba_          86 IITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVL  160 (283)
T ss_dssp             EEEECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             EEEEecccCcchhhhhc--ccccccHHHHHHHHHHHHHhhhhccccc---cccCccccceEEECCCCeEEEcccchhhcc
Confidence            99999999999988753  2356899999999999999999999987   999999999999999999999999999987


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ....
T Consensus       161 ~~~~  164 (283)
T d1mqba_         161 EDDP  164 (283)
T ss_dssp             ----
T ss_pred             cCCC
Confidence            5543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=3.2e-30  Score=268.00  Aligned_cols=150  Identities=29%  Similarity=0.425  Sum_probs=135.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||+||+|+. .+|+.||||++++.   .....+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            5799999999999999999987 45899999999753   2345678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+++|+|..++.   ....+++.....++.||+.||+|||+++   |+||||||+||||++++.+||+|||+|+.+...
T Consensus        84 E~~~gg~l~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~  157 (316)
T d1fota_          84 DYIEGGELFSLLR---KSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  157 (316)
T ss_dssp             CCCCSCBHHHHHH---HTSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             eecCCcccccccc---ccccccccHHHHHHHHHHHhhhhhccCc---EEccccCchheeEcCCCCEEEecCccceEeccc
Confidence            9999999999884   3456788888899999999999999987   999999999999999999999999999987543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=9e-31  Score=270.74  Aligned_cols=169  Identities=29%  Similarity=0.450  Sum_probs=140.5

Q ss_pred             HHHhcCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEe
Q 005825          503 VAAATENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIE  575 (675)
Q Consensus       503 ~~~~~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~  575 (675)
                      ++...++|++.++||+|+||+||+|+..      +++.||||+++.... ...++|.+|+.++++++||||++++++|.+
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~   87 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV   87 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeecc
Confidence            3345678999999999999999999864      357899999976433 345679999999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCC---------------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEec
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPT---------------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHR  634 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHr  634 (675)
                      .+..++||||+++|+|.+++....                     ....+++..++.|+.|++.||+|||+++   ||||
T Consensus        88 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~---ivHr  164 (301)
T d1lufa_          88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHR  164 (301)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC---eEee
Confidence            999999999999999999985321                     1234889999999999999999999987   9999


Q ss_pred             CCCCCCEEEcCCCCeEEeeeccceecCCCcccCCCCceec
Q 005825          635 DLKASNVLLDRDMNPKISDFGLARMFGGDELQGNTKRIVG  674 (675)
Q Consensus       635 Dlkp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~G  674 (675)
                      ||||+||||+.++.+||+|||+|+.+...+....+....|
T Consensus       165 DlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~  204 (301)
T d1lufa_         165 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI  204 (301)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCB
T ss_pred             EEcccceEECCCCcEEEccchhheeccCCccccccCCCCc
Confidence            9999999999999999999999998755543333333344

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.8e-30  Score=261.86  Aligned_cols=152  Identities=30%  Similarity=0.418  Sum_probs=135.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC------ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS------GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~------~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .+.|++.+.||+|+||+||+|+. .+|+.||||++++..      ....+.|.+|+.+|++++|||||++++++.+.+..
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            36799999999999999999987 468999999986432      22467899999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC----CeEEeeec
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM----NPKISDFG  655 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~----~~kl~DFG  655 (675)
                      +|||||+++|+|.+++.   ....+++..+..++.||+.||+|||+++   |+||||||+|||++.++    .+||+|||
T Consensus        89 ~iv~E~~~gg~L~~~i~---~~~~l~~~~~~~~~~qi~~al~yLH~~~---ivHrDiKp~Nill~~~~~~~~~vkl~DfG  162 (293)
T d1jksa_          89 ILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFG  162 (293)
T ss_dssp             EEEEECCCSCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred             EEEEEcCCCccccchhc---cccccchhHHHHHHHHHHHHHHhhhhcc---eeecccccceEEEecCCCcccceEecchh
Confidence            99999999999999984   3456899999999999999999999998   99999999999998876    49999999


Q ss_pred             cceecCCCc
Q 005825          656 LARMFGGDE  664 (675)
Q Consensus       656 la~~~~~~~  664 (675)
                      +|+.+....
T Consensus       163 ~a~~~~~~~  171 (293)
T d1jksa_         163 LAHKIDFGN  171 (293)
T ss_dssp             TCEECTTSC
T ss_pred             hhhhcCCCc
Confidence            999885443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.6e-29  Score=260.63  Aligned_cols=152  Identities=20%  Similarity=0.303  Sum_probs=134.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .++|++.+.||+|+||+||+|+.. +++.||||.++... .....+.+|+++|++++|||||++++++.+.+..+|||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            368999999999999999999874 68899999997642 3345688999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC--CCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR--DMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~--~~~~kl~DFGla~~~~~~  663 (675)
                      +++|+|.+++..  ....+++.+...|+.||+.||+|||+++   |+||||||+|||++.  ...+||+|||+|+.....
T Consensus        83 ~~gg~L~~~i~~--~~~~l~e~~~~~i~~qi~~al~yLH~~~---iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~  157 (321)
T d1tkia_          83 ISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             CCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             CCCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCcccccccceeecCCCceEEEEcccchhhccccC
Confidence            999999999943  2336899999999999999999999988   999999999999985  458999999999987554


Q ss_pred             c
Q 005825          664 E  664 (675)
Q Consensus       664 ~  664 (675)
                      .
T Consensus       158 ~  158 (321)
T d1tkia_         158 D  158 (321)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=1.9e-29  Score=265.76  Aligned_cols=150  Identities=25%  Similarity=0.337  Sum_probs=136.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~  583 (675)
                      ++|++.++||+|+||.||+|+.. +|+.||||++++.   .....+.+.+|+.+|++++|||||++++++.+....++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            57999999999999999999874 6999999998643   2345678999999999999999999999999999999999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ||+.+|+|..++.   +...+++.....++.||+.||.|||+++   ||||||||+||||+.++++||+|||+|+.+...
T Consensus       121 e~~~~g~l~~~l~---~~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~  194 (350)
T d1rdqe_         121 EYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             ECCTTCBHHHHHH---HHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             ccccccchhhhHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence            9999999999984   3456899999999999999999999998   999999999999999999999999999988543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-29  Score=263.55  Aligned_cols=162  Identities=33%  Similarity=0.526  Sum_probs=132.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCc----EEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGE----EVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~----~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .+|++.++||+|+||+||+|+.. +|+    +||||+++.. .....++|.+|+.++++++|||||+++|+|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            46999999999999999999864 343    6899998753 445678899999999999999999999999864 5678


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ++||+.+++|.+++..  ....+++..++.|+.|||.||+|||+++   |+||||||+||||+.++++||+|||+|+.+.
T Consensus        88 v~e~~~~~~l~~~~~~--~~~~~~~~~~~~i~~qi~~gl~yLH~~~---iiHrDlKp~NIll~~~~~~kl~DFGla~~~~  162 (317)
T d1xkka_          88 ITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG  162 (317)
T ss_dssp             EEECCTTCBHHHHHHH--TSSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCCSHHHHTT
T ss_pred             EEEeccCCcccccccc--cccCCCHHHHHHHHHHHHHHHHHHHHcC---cccCcchhhcceeCCCCCeEeeccccceecc
Confidence            8999999999988754  3456899999999999999999999987   9999999999999999999999999999886


Q ss_pred             CCcccCCCCceecC
Q 005825          662 GDELQGNTKRIVGT  675 (675)
Q Consensus       662 ~~~~~~~~~~~~GT  675 (675)
                      ..+....+...+||
T Consensus       163 ~~~~~~~~~~~~gt  176 (317)
T d1xkka_         163 AEEKEYHAEGGKVP  176 (317)
T ss_dssp             TTCC--------CC
T ss_pred             cccccccccccccC
Confidence            65544444444554

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=1.9e-29  Score=267.10  Aligned_cols=152  Identities=29%  Similarity=0.357  Sum_probs=131.8

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHH---HHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNE---MLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E---~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .++|++.++||+|+||.||+|+.. +|+.||||++.+.   .......+.+|   +.+++.++|||||++++++.+.+..
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            368999999999999999999875 5899999998642   12233344444   6677778899999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ++||||+++|+|.+++.   ....+++..+..++.||+.||+|||+++   ||||||||+|||+++++.+||+|||+|+.
T Consensus        83 ~ivmE~~~gg~L~~~l~---~~~~~~e~~~~~~~~qi~~aL~ylH~~~---iiHrDlKP~NILl~~~g~iKl~DFGla~~  156 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLS---QHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACD  156 (364)
T ss_dssp             EEEECCCCSCBHHHHHH---HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSSSCEEECCCTTCEE
T ss_pred             EEEEEecCCCcHHHHHH---hcccccHHHHHHHHHHHHHHHHHHHHCC---ccceeeccceeEEcCCCcEEEeeeceeee
Confidence            99999999999999994   3456888999999999999999999998   99999999999999999999999999998


Q ss_pred             cCCCc
Q 005825          660 FGGDE  664 (675)
Q Consensus       660 ~~~~~  664 (675)
                      +....
T Consensus       157 ~~~~~  161 (364)
T d1omwa3         157 FSKKK  161 (364)
T ss_dssp             CSSSC
T ss_pred             cCCCc
Confidence            86543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-29  Score=262.30  Aligned_cols=166  Identities=27%  Similarity=0.420  Sum_probs=139.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEK  579 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~  579 (675)
                      .++|++.++||+|+||+||+|++.      +++.||||+++... ......|.+|+.++++++|||||+++++|...+..
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~   98 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   98 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence            368899999999999999999763      35789999997543 23445799999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHhcCC-------CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEe
Q 005825          580 ILILEYMPNKSLDVFLFDP-------TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~-------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                      ++||||+++|+|.+++...       .....+++..+..|+.|+|+||.|||+++   |+||||||+||||++++++||+
T Consensus        99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~---ivHrDlk~~NiLld~~~~~Kl~  175 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIG  175 (308)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEEC
T ss_pred             eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeeceEcCCceeecCCceEEEe
Confidence            9999999999999998532       12235789999999999999999999987   9999999999999999999999


Q ss_pred             eeccceecCCCcccCCCCceecC
Q 005825          653 DFGLARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       653 DFGla~~~~~~~~~~~~~~~~GT  675 (675)
                      |||+|+.+........+.+..||
T Consensus       176 DFGla~~~~~~~~~~~~~~~~~t  198 (308)
T d1p4oa_         176 DFGMTRDIYETDYYRKGGKGLLP  198 (308)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEEC
T ss_pred             ecccceeccCCcceeeccceecc
Confidence            99999988655443333333443

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.8e-29  Score=259.46  Aligned_cols=160  Identities=26%  Similarity=0.380  Sum_probs=137.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCc---CccCHHHHHHHHHHHH-hcCCCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQ---SGQGLEEFKNEMLLIA-KLQHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~f~~E~~il~-~l~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ++|++.++||+|+||+||+|+.. +++.||||++++.   .....+.+..|..++. .++|||||++++++.+++..++|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            57999999999999999999874 5899999999753   2345567777877765 68999999999999999999999


Q ss_pred             EEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCC
Q 005825          583 LEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGG  662 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~  662 (675)
                      |||+++|+|.+++.   ....+++.+...++.||+.||+|||+++   |+||||||+|||+++++++||+|||+|+.+..
T Consensus        82 mEy~~~g~L~~~i~---~~~~~~e~~~~~~~~qi~~al~ylH~~~---iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~  155 (320)
T d1xjda_          82 MEYLNGGDLMYHIQ---SCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENML  155 (320)
T ss_dssp             EECCTTCBHHHHHH---HHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EeecCCCcHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCcccceeecCCCceeccccchhhhccc
Confidence            99999999999994   3456888999999999999999999998   99999999999999999999999999997754


Q ss_pred             CcccCCCCceecC
Q 005825          663 DELQGNTKRIVGT  675 (675)
Q Consensus       663 ~~~~~~~~~~~GT  675 (675)
                      ....  ....+||
T Consensus       156 ~~~~--~~~~~gt  166 (320)
T d1xjda_         156 GDAK--TNTFCGT  166 (320)
T ss_dssp             TTCC--BCCCCSC
T ss_pred             cccc--ccccCCC
Confidence            4332  2234565

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.8e-29  Score=258.05  Aligned_cols=152  Identities=31%  Similarity=0.473  Sum_probs=131.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|++.++||+|+||+||+|+. .+++.||||+++...  ....+.+.+|+.++++++|||||++++++.++++.++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            6899999999999999999987 568999999997532  2346789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      |+.++.+.....  .....+++..+..++.||+.||+|||+++   ||||||||+|||++.++.+||+|||+|+....+.
T Consensus        82 ~~~~~~~~~~~~--~~~~~l~e~~~~~~~~qil~~L~yLH~~~---IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~  156 (298)
T d1gz8a_          82 FLHQDLKKFMDA--SALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  156 (298)
T ss_dssp             CCSEEHHHHHHH--TTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             ecCCchhhhhhh--hcccCCCHHHHHHHHHHHHHHHHHhhcCC---EEccccCchheeecccCcceeccCCcceeccCCc
Confidence            998665544432  23446899999999999999999999998   9999999999999999999999999999875443

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.4e-29  Score=259.69  Aligned_cols=166  Identities=28%  Similarity=0.406  Sum_probs=129.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcC-ccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCC-
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQG-  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~-  577 (675)
                      .++|++.++||+|+||+||+|+..      +++.||||+++... ....+++..|+.++.++ +|+||+++++++.+.+ 
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            468999999999999999999863      24689999997543 33456788888888877 6899999999987654 


Q ss_pred             eEEEEEEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc
Q 005825          578 EKILILEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD  644 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~  644 (675)
                      ..++||||+++|+|.+++....             ....+++.+++.++.||++||+|||+++   |+||||||+||||+
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---ivHrDlKp~NILl~  168 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLS  168 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC---CcCCcCCccceeEC
Confidence            6899999999999999986422             1345889999999999999999999987   99999999999999


Q ss_pred             CCCCeEEeeeccceecCCCcccCCCCceecC
Q 005825          645 RDMNPKISDFGLARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       645 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~GT  675 (675)
                      +++++||+|||+|+..........+...+||
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt  199 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYVRKGDARLP  199 (299)
T ss_dssp             GGGCEEECC------CCSCTTSCCTTSCCCG
T ss_pred             CCCcEEEccCcchhhccccccccccCceeeC
Confidence            9999999999999988655544444455665

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.4e-29  Score=257.35  Aligned_cols=148  Identities=29%  Similarity=0.425  Sum_probs=125.8

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHH--HHHHHHHhcCCCceeeEEEEEEeCC----eEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFK--NEMLLIAKLQHRNLVRILGCCIEQG----EKIL  581 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~--~E~~il~~l~H~nIv~l~g~~~~~~----~~~l  581 (675)
                      +.|.+.++||+|+||.||+|++ +|+.||||+++..   ..+++.  .|+..+.+++|||||+++++|.+.+    ..++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            5678889999999999999997 6889999999743   223333  4555556789999999999998754    5799


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhc-----CCCceEecCCCCCCEEEcCCCCeEEeeecc
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHY-----SRFRIIHRDLKASNVLLDRDMNPKISDFGL  656 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-----~~~~iiHrDlkp~NILl~~~~~~kl~DFGl  656 (675)
                      ||||+++|+|.+++.+    ..++|..++.++.++|.||+|||+.     +..+|+||||||+||||++++.+||+|||+
T Consensus        79 v~Ey~~~g~L~~~l~~----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl  154 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             EEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEecccCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCc
Confidence            9999999999999953    3589999999999999999999974     234699999999999999999999999999


Q ss_pred             ceecCCC
Q 005825          657 ARMFGGD  663 (675)
Q Consensus       657 a~~~~~~  663 (675)
                      ++.+...
T Consensus       155 ~~~~~~~  161 (303)
T d1vjya_         155 AVRHDSA  161 (303)
T ss_dssp             CEEEETT
T ss_pred             cccccCC
Confidence            9988554

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-29  Score=255.70  Aligned_cols=151  Identities=32%  Similarity=0.452  Sum_probs=124.5

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC--C--cEEEEEEecCc---CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN--G--EEVAVKRLSSQ---SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKI  580 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~--g--~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~  580 (675)
                      ++|++.+.||+|+||+||+|++..  +  .+||||++++.   .....++|.+|+.++++++|||||+++|++.+ +..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            679999999999999999998632  2  37899998753   23345789999999999999999999999965 4678


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +||||+++|++.+++..  ....+++..++.++.|||+||.|||+++   |+||||||+||||+.++.+||+|||+|+.+
T Consensus        87 lv~e~~~~~~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDikp~NIll~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             EEEECCTTCBHHHHHHH--HGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             eeeeeecCcchhhhhhc--ccCCCCHHHHHHHHHHHHHHHHHhhhCC---EeeeeecHHHhccccccceeeccchhhhhc
Confidence            99999999999988753  3456899999999999999999999987   999999999999999999999999999988


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ....
T Consensus       162 ~~~~  165 (273)
T d1u46a_         162 PQND  165 (273)
T ss_dssp             CC-C
T ss_pred             ccCC
Confidence            5544

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.96  E-value=4.9e-29  Score=255.72  Aligned_cols=150  Identities=28%  Similarity=0.443  Sum_probs=135.6

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.++||+|+||+||+|+..+++.||||+++...  ....+.+.+|+.+|++++|||||++++++.+.+..+++|||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            6899999999999999999999899999999997542  33467899999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +.++.+..+.   .....+++..+..|+.||+.||+|||+++   ||||||||+|||+++++.+||+|||+|......
T Consensus        82 ~~~~~~~~~~---~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~  153 (286)
T d1ob3a_          82 LDQDLKKLLD---VCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (286)
T ss_dssp             CSEEHHHHHH---TSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             ehhhhHHHHH---hhcCCcchhhhHHHHHHHHHHHHHhccCc---EEecCCCCceeeEcCCCCEEecccccceecccC
Confidence            9988887776   33466999999999999999999999987   999999999999999999999999999887543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.3e-29  Score=255.26  Aligned_cols=152  Identities=28%  Similarity=0.427  Sum_probs=124.1

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC----CcEEEEEEecCcCc-cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN----GEEVAVKRLSSQSG-QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~l  581 (675)
                      .++|++.+.||+|+||+||+|+...    +..||||.++.... ...+.|.+|+.++++++|||||++++++. .+..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            3689999999999999999998643    35799999875433 34567999999999999999999999985 467899


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecC
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFG  661 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~  661 (675)
                      ||||+++|+|.+++..  ....+++..++.++.||++||.|||+++   |+||||||+||++++++.+||+|||+|+.+.
T Consensus        85 v~E~~~~g~l~~~~~~--~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~  159 (273)
T d1mp8a_          85 IMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME  159 (273)
T ss_dssp             EEECCTTEEHHHHHHH--TTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEEeccCCcHHhhhhc--cCCCCCHHHHHHHHHHHHHHhhhhcccC---eeccccchhheeecCCCcEEEccchhheecc
Confidence            9999999999998743  3446899999999999999999999987   9999999999999999999999999999875


Q ss_pred             CCc
Q 005825          662 GDE  664 (675)
Q Consensus       662 ~~~  664 (675)
                      ...
T Consensus       160 ~~~  162 (273)
T d1mp8a_         160 DST  162 (273)
T ss_dssp             ---
T ss_pred             CCc
Confidence            443

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.2e-29  Score=257.25  Aligned_cols=152  Identities=34%  Similarity=0.575  Sum_probs=132.0

Q ss_pred             CCcceeeeeCCcCceeEEEEEEcC-Cc--EEEEEEecCc-CccCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCeEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLLN-GE--EVAVKRLSSQ-SGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGEKILI  582 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~~-g~--~vAvK~l~~~-~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~~~lV  582 (675)
                      ++|++.++||+|+||+||+|++.+ +.  .||||+++.. .....++|.+|+++|.++ +|||||+++++|.+++..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            688999999999999999998754 44  5788888643 344567899999999999 799999999999999999999


Q ss_pred             EEecCCCCHHHHhcCC-------------CCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCe
Q 005825          583 LEYMPNKSLDVFLFDP-------------TKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNP  649 (675)
Q Consensus       583 ~Ey~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~  649 (675)
                      |||+++|+|.++++..             .....+++..++.++.|||+||.|||+++   |+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~---iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC---ccccccccceEEEcCCCce
Confidence            9999999999999643             23457899999999999999999999987   9999999999999999999


Q ss_pred             EEeeeccceecCC
Q 005825          650 KISDFGLARMFGG  662 (675)
Q Consensus       650 kl~DFGla~~~~~  662 (675)
                      ||+|||+|+....
T Consensus       167 kl~DfG~a~~~~~  179 (309)
T d1fvra_         167 KIADFGLSRGQEV  179 (309)
T ss_dssp             EECCTTCEESSCE
T ss_pred             EEccccccccccc
Confidence            9999999987643

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=8.3e-29  Score=252.78  Aligned_cols=163  Identities=25%  Similarity=0.367  Sum_probs=132.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc---cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC----e
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG---QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG----E  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~----~  578 (675)
                      .++|++.+.||+|+||+||+|+. .+++.||||+++....   ...+.|.+|+.++++++|||||++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            36799999999999999999986 4699999999976432   33457999999999999999999999998654    3


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .+|||||+++++|.+++.   ....+++.+...|+.||+.||+|||+++   |+||||||+|||++.++.+||+|||+++
T Consensus        86 ~~lvmE~~~g~~L~~~~~---~~~~l~~~~~~~i~~qi~~al~~lH~~~---iiHrDiKP~NIll~~~~~~~l~d~~~~~  159 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR  159 (277)
T ss_dssp             EEEEEECCCEEEHHHHHH---HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred             EEEEEECCCCCEehhhhc---ccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCccccCcccccCccccceeehhhhhh
Confidence            789999999999999884   3456899999999999999999999987   9999999999999999999999999998


Q ss_pred             ecCCCc-ccCCCCceecC
Q 005825          659 MFGGDE-LQGNTKRIVGT  675 (675)
Q Consensus       659 ~~~~~~-~~~~~~~~~GT  675 (675)
                      .+.... ........+||
T Consensus       160 ~~~~~~~~~~~~~~~~Gt  177 (277)
T d1o6ya_         160 AIADSGNSVTQTAAVIGT  177 (277)
T ss_dssp             ECC---------------
T ss_pred             hhccccccccccccccCc
Confidence            774332 22223334554

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5e-29  Score=258.73  Aligned_cols=166  Identities=30%  Similarity=0.406  Sum_probs=140.3

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc------CCcEEEEEEecCcCc-cCHHHHHHHHHHHHhc-CCCceeeEEEEEEeCCe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL------NGEEVAVKRLSSQSG-QGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQGE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~~~  578 (675)
                      .++|++.++||+|+||.||+|++.      +++.||||+++.... ....+|.+|+.+++++ +|||||+++++|.+++.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            468999999999999999999752      367899999986433 3456799999999999 69999999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCC---------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE
Q 005825          579 KILILEYMPNKSLDVFLFDPT---------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL  643 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~---------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl  643 (675)
                      .++||||+++|+|.++++...               ....+++..+..++.||++||+|||+++   |+||||||+|||+
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~---ivHrDLKp~NIl~  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccccccccc
Confidence            999999999999999986421               2336889999999999999999999998   9999999999999


Q ss_pred             cCCCCeEEeeeccceecCCCcccCCCCceecC
Q 005825          644 DRDMNPKISDFGLARMFGGDELQGNTKRIVGT  675 (675)
Q Consensus       644 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~GT  675 (675)
                      +.++.+||+|||+|+.+.............||
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt  210 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLP  210 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEEC
T ss_pred             cccCcccccccchheeccCCCcceEeeecccC
Confidence            99999999999999988655433333334444

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.6e-29  Score=256.94  Aligned_cols=147  Identities=31%  Similarity=0.411  Sum_probs=126.3

Q ss_pred             eeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCc-----cCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEEe
Q 005825          512 MECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSG-----QGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILEY  585 (675)
Q Consensus       512 ~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~-----~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~Ey  585 (675)
                      .+++||+|+||+||+|+.. +|+.||||+++....     ...+.+.+|+.++++++|||||++++++.++++.++||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            3579999999999999874 589999999975322     1235689999999999999999999999999999999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ++++++..+.   .....+++.++..++.||+.||+|||+++   |+||||||+|||+++++.+||+|||+|+.+..+.
T Consensus        82 ~~~~~~~~~~---~~~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~  154 (299)
T d1ua2a_          82 METDLEVIIK---DNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN  154 (299)
T ss_dssp             CSEEHHHHHT---TCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred             hcchHHhhhh---hcccCCCHHHHHHHHHHHHHHHHHhhccc---eecccCCcceEEecCCCccccccCccccccCCCc
Confidence            9998877665   33456888889999999999999999998   9999999999999999999999999999876543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-28  Score=254.03  Aligned_cols=147  Identities=32%  Similarity=0.558  Sum_probs=128.3

Q ss_pred             eeeeCCcCceeEEEEEEcCC----cEEEEEEecCc-CccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC-CeEEEEEEec
Q 005825          513 ECKLGEGGFGPVYKGRLLNG----EEVAVKRLSSQ-SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ-GEKILILEYM  586 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~g----~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~-~~~~lV~Ey~  586 (675)
                      .++||+|+||+||+|++.+.    ..||||+++.. .....++|.+|++++++++|||||+++|++.+. +..++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            57899999999999987542    36899999753 344567899999999999999999999998764 5899999999


Q ss_pred             CCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCCc
Q 005825          587 PNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGDE  664 (675)
Q Consensus       587 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~~  664 (675)
                      ++|+|.+++..  ....+++..++.++.|++.||.|||+.+   |+||||||+||||++++.+||+|||+++.+...+
T Consensus       112 ~~g~l~~~~~~--~~~~~~~~~~~~i~~qia~gL~~lH~~~---iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~  184 (311)
T d1r0pa_         112 KHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  184 (311)
T ss_dssp             TTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred             ecCchhhhhcc--ccccchHHHHHHHHHHHHHhhhhhcccC---cccCCccHHhEeECCCCCEEEecccchhhccccc
Confidence            99999999864  3445778899999999999999999987   9999999999999999999999999999886543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.3e-29  Score=252.37  Aligned_cols=150  Identities=31%  Similarity=0.535  Sum_probs=126.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC-CeEEEEEEe
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ-GEKILILEY  585 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~-~~~~lV~Ey  585 (675)
                      .++|++.++||+|+||.||+|++ .|++||||+++..  ...++|.+|++++++++||||++++|+|.+. +..++||||
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            35788999999999999999998 5788999999753  3457899999999999999999999999654 568999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      +++|+|.+++... ....++|..++.|+.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.....
T Consensus        83 ~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~i~~al~ylH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~  156 (262)
T d1byga_          83 MAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  156 (262)
T ss_dssp             CTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred             cCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHhhccccccCc---eeccccchHhheecCCCCEeecccccceecCCC
Confidence            9999999999542 2335899999999999999999999987   999999999999999999999999999977543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-28  Score=253.73  Aligned_cols=165  Identities=31%  Similarity=0.467  Sum_probs=134.9

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEcC--------CcEEEEEEecCcCc-cCHHHHHHHHHHHHhc-CCCceeeEEEEEEeC
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLLN--------GEEVAVKRLSSQSG-QGLEEFKNEMLLIAKL-QHRNLVRILGCCIEQ  576 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~~--------g~~vAvK~l~~~~~-~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~~  576 (675)
                      .++|++.++||+|+||.||+|+...        +..||||+++.... ....++.+|+..+.++ +|||||+++++|.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            4689999999999999999997532        34799999976533 3457899999999888 799999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHhcCCC-------------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEE
Q 005825          577 GEKILILEYMPNKSLDVFLFDPT-------------KKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLL  643 (675)
Q Consensus       577 ~~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl  643 (675)
                      +..++||||+++|+|.+++....             ....+++.+++.++.||+.||+|||+++   ||||||||+|||+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~---ivHrDiKp~NiLl  168 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV  168 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC---EEeeeecccceee
Confidence            99999999999999999996432             1246899999999999999999999998   9999999999999


Q ss_pred             cCCCCeEEeeeccceecCCCcccCCCCceec
Q 005825          644 DRDMNPKISDFGLARMFGGDELQGNTKRIVG  674 (675)
Q Consensus       644 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~G  674 (675)
                      +.++.+||+|||+++..........+...+|
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  199 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRL  199 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCC
T ss_pred             cCCCCeEeccchhhccccccccccccccCCC
Confidence            9999999999999998865544333333444

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.3e-28  Score=253.18  Aligned_cols=149  Identities=23%  Similarity=0.327  Sum_probs=127.7

Q ss_pred             cCCcceee-eeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhc-CCCceeeEEEEEEe----CCeE
Q 005825          507 TENFSMEC-KLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKL-QHRNLVRILGCCIE----QGEK  579 (675)
Q Consensus       507 ~~~f~~~~-~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l-~H~nIv~l~g~~~~----~~~~  579 (675)
                      .++|.+.+ .||+|+||+||+|+. .+++.||||+++.     ...+.+|+.++.++ +|||||++++++.+    ....
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            36898875 599999999999986 5689999999964     25678899987655 89999999999875    3568


Q ss_pred             EEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC---CCCeEEeeecc
Q 005825          580 ILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR---DMNPKISDFGL  656 (675)
Q Consensus       580 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~---~~~~kl~DFGl  656 (675)
                      ++||||++||+|.+++... ....+++.+...|+.||+.||+|||+++   |+||||||+|||+++   .+.+||+|||+
T Consensus        85 ~ivmEy~~gg~L~~~i~~~-~~~~l~e~~~~~i~~qi~~al~ylH~~~---iiHRDiKp~NIll~~~~~~~~~Kl~DFG~  160 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF  160 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSC-SCCCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEECCCCCcHHHHHHhc-CCCCcCHHHHHHHHHHHHHHHHHHHHcC---Cccccccccccccccccccccccccccce
Confidence            9999999999999999642 2346899999999999999999999998   999999999999985   56799999999


Q ss_pred             ceecCCCc
Q 005825          657 ARMFGGDE  664 (675)
Q Consensus       657 a~~~~~~~  664 (675)
                      |+.+...+
T Consensus       161 a~~~~~~~  168 (335)
T d2ozaa1         161 AKETTSHN  168 (335)
T ss_dssp             CEECCCCC
T ss_pred             eeeccCCC
Confidence            99886544

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.3e-28  Score=246.84  Aligned_cols=151  Identities=24%  Similarity=0.368  Sum_probs=130.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCc------cCHHHHHHHHHHHHhcC--CCceeeEEEEEEeCC
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSG------QGLEEFKNEMLLIAKLQ--HRNLVRILGCCIEQG  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~f~~E~~il~~l~--H~nIv~l~g~~~~~~  577 (675)
                      .++|++.++||+|+||+||+|+. .+++.||||++++...      ....++.+|+.++++++  |||||++++++.+++
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            36899999999999999999986 4689999999875321      12345778999999996  899999999999999


Q ss_pred             eEEEEEEecCC-CCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-CCCeEEeeec
Q 005825          578 EKILILEYMPN-KSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-DMNPKISDFG  655 (675)
Q Consensus       578 ~~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-~~~~kl~DFG  655 (675)
                      ..++||||+.+ +++.+++.   ....+++.++..++.||++||+|||+++   |+||||||+|||++. ++.+||+|||
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~---~~~~l~e~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NIll~~~~~~vkl~DFG  156 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFIT---ERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG  156 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHH---HHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             eEEEEEEeccCcchHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---CccccCcccceEEecCCCeEEECccc
Confidence            99999999986 67777773   3456899999999999999999999988   999999999999985 4799999999


Q ss_pred             cceecCCC
Q 005825          656 LARMFGGD  663 (675)
Q Consensus       656 la~~~~~~  663 (675)
                      +|+.....
T Consensus       157 ~a~~~~~~  164 (273)
T d1xwsa_         157 SGALLKDT  164 (273)
T ss_dssp             TCEECCSS
T ss_pred             cceecccc
Confidence            99987543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.4e-27  Score=242.38  Aligned_cols=150  Identities=28%  Similarity=0.427  Sum_probs=135.2

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCCeEEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      ++|++.++||+|+||+||+|+. .+++.||||+++...  ....+++++|+.++++++||||+++++++.+....++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5899999999999999999987 468999999997542  2346789999999999999999999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceecCCC
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMFGGD  663 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~~~~  663 (675)
                      ++.+++|..++.   ..+.+++..+..++.|++.||+|||+++   |+||||||+|||++.++.+||+|||+|+.....
T Consensus        82 ~~~~~~l~~~~~---~~~~~~~~~~~~~~~q~~~aL~~lH~~~---IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~  154 (292)
T d1unla_          82 FCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             CCSEEHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred             eccccccccccc---cccccchhHHHHHHHHHHHHHHHhhcCC---EeeecccCcccccccCCceeeeecchhhcccCC
Confidence            999999988874   3456788999999999999999999987   999999999999999999999999999987544

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.1e-27  Score=250.51  Aligned_cols=149  Identities=31%  Similarity=0.461  Sum_probs=124.6

Q ss_pred             CcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC------eEEE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------EKIL  581 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~------~~~l  581 (675)
                      .|+..++||+|+||+||+|+.. +++.||||+++....    .+.+|+.+|++++||||+++++++....      +.+|
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            6888899999999999999875 589999999976432    2346999999999999999999996432      4789


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-CeEEeeeccceec
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLARMF  660 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DFGla~~~  660 (675)
                      ||||++++.+..+.........+++.++..++.||+.||+|||+++   |+||||||+|||++.++ .+||+|||+|+.+
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~---IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCcceEEEecCCCceeEecccchhhc
Confidence            9999987755544432234456899999999999999999999987   99999999999999775 8999999999988


Q ss_pred             CCCc
Q 005825          661 GGDE  664 (675)
Q Consensus       661 ~~~~  664 (675)
                      ...+
T Consensus       174 ~~~~  177 (350)
T d1q5ka_         174 VRGE  177 (350)
T ss_dssp             CTTS
T ss_pred             cCCc
Confidence            6544

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.9e-27  Score=250.33  Aligned_cols=150  Identities=27%  Similarity=0.398  Sum_probs=127.2

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC-ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC----eEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS-GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG----EKI  580 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~----~~~  580 (675)
                      +.+|++.++||+|+||+||+|+. .+|+.||||++++.. ....+.+++|+.+|++++||||+++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            45799999999999999999986 579999999997543 334567899999999999999999999997643    335


Q ss_pred             EEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccceec
Q 005825          581 LILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLARMF  660 (675)
Q Consensus       581 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~~  660 (675)
                      +++||+.+|+|.+++..    ..+++..+..++.||++||+|||+++   ||||||||+||||++++.+||+|||+|+..
T Consensus        87 ~l~~~~~~g~L~~~l~~----~~l~~~~i~~i~~qil~al~yLH~~~---iiHRDIKp~NILl~~~~~~kl~DfG~a~~~  159 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA  159 (345)
T ss_dssp             EEEEECCCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEeecCCchhhhhhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCcceEEECCCCCEEEcccCceeec
Confidence            55677789999999842    35899999999999999999999998   999999999999999999999999999987


Q ss_pred             CCC
Q 005825          661 GGD  663 (675)
Q Consensus       661 ~~~  663 (675)
                      ...
T Consensus       160 ~~~  162 (345)
T d1pmea_         160 DPD  162 (345)
T ss_dssp             CGG
T ss_pred             cCC
Confidence            544

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.94  E-value=4.8e-27  Score=245.62  Aligned_cols=145  Identities=24%  Similarity=0.410  Sum_probs=127.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeC--CeEEEEE
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQ--GEKILIL  583 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~--~~~~lV~  583 (675)
                      ++|++.++||+|+||+||+|+. .+++.||||+++.   ...+++.+|+.+|++++ ||||+++++++...  ...++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~---~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---SCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECH---HHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            6899999999999999999987 4689999999974   33577899999999995 99999999999754  4689999


Q ss_pred             EecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCC-CeEEeeeccceecCC
Q 005825          584 EYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDM-NPKISDFGLARMFGG  662 (675)
Q Consensus       584 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~-~~kl~DFGla~~~~~  662 (675)
                      ||+++++|..+.      +.+++.++..++.||+.||+|||+++   |+||||||+|||++.++ .+||+|||+|+.+..
T Consensus       112 e~~~~~~L~~~~------~~l~e~~i~~i~~qil~aL~~LH~~g---IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~  182 (328)
T d3bqca1         112 EHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP  182 (328)
T ss_dssp             ECCCSCBGGGTT------TSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCGGGCEECCT
T ss_pred             eecCCCcHHHHh------cCCCHHHHHHHHHHHHHHHHHHhhcc---cccccccccceEEcCCCCeeeecccccceeccC
Confidence            999999987654      34889999999999999999999998   99999999999998655 699999999998865


Q ss_pred             Cc
Q 005825          663 DE  664 (675)
Q Consensus       663 ~~  664 (675)
                      .+
T Consensus       183 ~~  184 (328)
T d3bqca1         183 GQ  184 (328)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.6e-26  Score=240.47  Aligned_cols=151  Identities=28%  Similarity=0.495  Sum_probs=128.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCc--CccCHHHHHHHHHHHHhcCCCceeeEEEEEEe--------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQ--SGQGLEEFKNEMLLIAKLQHRNLVRILGCCIE--------  575 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~--------  575 (675)
                      .++|++.++||+|+||+||+|+. .+|+.||||++...  .....+.+.+|+.+|++++||||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            37899999999999999999987 46999999998643  33455778999999999999999999999865        


Q ss_pred             CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeec
Q 005825          576 QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFG  655 (675)
Q Consensus       576 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFG  655 (675)
                      ....++||||++++.+..+.   .....++......|+.||+.||.|||+++   |+||||||+|||+++++.+||+|||
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~---~~~~~~~~~~~~~i~~qil~~l~~lH~~~---ivHrDlKp~NILl~~~~~~kl~dfg  162 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLS---NVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFG  162 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHT---CTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCT
T ss_pred             CceEEEEEeccCCCccchhh---hcccccccHHHHHHHHHHHHHHHHhccCC---EEecCcCchheeecCCCcEEeeecc
Confidence            34579999999988877655   33446788889999999999999999987   9999999999999999999999999


Q ss_pred             cceecCCC
Q 005825          656 LARMFGGD  663 (675)
Q Consensus       656 la~~~~~~  663 (675)
                      +|+.+...
T Consensus       163 ~~~~~~~~  170 (318)
T d3blha1         163 LARAFSLA  170 (318)
T ss_dssp             TCEECCC-
T ss_pred             eeeecccc
Confidence            99887644

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.9e-27  Score=244.51  Aligned_cols=151  Identities=28%  Similarity=0.395  Sum_probs=133.3

Q ss_pred             CCcceeeeeCCcCceeEEEEEEc----CCcEEEEEEecCc----CccCHHHHHHHHHHHHhcCC-CceeeEEEEEEeCCe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRLL----NGEEVAVKRLSSQ----SGQGLEEFKNEMLLIAKLQH-RNLVRILGCCIEQGE  578 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~~----~g~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~H-~nIv~l~g~~~~~~~  578 (675)
                      ++|++.++||+|+||+||+|+..    +|+.||||.+++.    .....+.+.+|++++++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            57999999999999999999752    4789999998753    22345678899999999966 899999999999999


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .++||||+.+|+|.+++.   ....+.......++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|+
T Consensus       104 ~~~v~e~~~~~~L~~~i~---~~~~~~e~~~~~~~~Qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~vkL~DFG~a~  177 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLS---QRERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK  177 (322)
T ss_dssp             EEEEECCCCSCBHHHHHH---HHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             eeeeeecccccHHHHHHH---hcccccHHHHHHHHHHHHHHHHHhhcCC---EEeccCCccceeecCCCCEEEeeccchh
Confidence            999999999999999984   3445678888899999999999999987   9999999999999999999999999999


Q ss_pred             ecCCCc
Q 005825          659 MFGGDE  664 (675)
Q Consensus       659 ~~~~~~  664 (675)
                      .+....
T Consensus       178 ~~~~~~  183 (322)
T d1vzoa_         178 EFVADE  183 (322)
T ss_dssp             ECCGGG
T ss_pred             hhcccc
Confidence            875544

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-26  Score=244.68  Aligned_cols=149  Identities=27%  Similarity=0.410  Sum_probs=124.6

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeCC------
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQG------  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~~------  577 (675)
                      .++|++.++||+|+||+||+|+.. +|+.||||+++...  ....+.+.+|+++|++++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            478999999999999999999874 59999999997532  233567899999999999999999999997654      


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      +.++||||+ +.+|..++.    ...+++..+..++.||+.||+|||+++   |+||||||+|||++.++.+||+|||+|
T Consensus        97 ~~~lv~e~~-~~~l~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---IiHrDiKp~NIL~~~~~~~kl~Dfg~a  168 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMK----HEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA  168 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             eEEEEEecc-cccHHHHHH----hccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCcchhhcccccccccccccce
Confidence            579999999 667777763    346899999999999999999999998   999999999999999999999999999


Q ss_pred             eecCCC
Q 005825          658 RMFGGD  663 (675)
Q Consensus       658 ~~~~~~  663 (675)
                      +.....
T Consensus       169 ~~~~~~  174 (346)
T d1cm8a_         169 RQADSE  174 (346)
T ss_dssp             EECCSS
T ss_pred             eccCCc
Confidence            987543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.93  E-value=4.8e-26  Score=233.98  Aligned_cols=149  Identities=21%  Similarity=0.341  Sum_probs=129.7

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcCccCHHHHHHHHHHHHhcCC-CceeeEEEEEEeCCeEEEEEE
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQH-RNLVRILGCCIEQGEKILILE  584 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H-~nIv~l~g~~~~~~~~~lV~E  584 (675)
                      .++|++.++||+|+||+||+|+.. +++.||||.+....  ....+++|+++++.++| +|++.+++++.++...++|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            468999999999999999999864 58999999986532  33567889999999975 899999999999999999999


Q ss_pred             ecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcC-----CCCeEEeeecccee
Q 005825          585 YMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDR-----DMNPKISDFGLARM  659 (675)
Q Consensus       585 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~-----~~~~kl~DFGla~~  659 (675)
                      |+ +++|.+++..  ....+++.+...++.|++.||+|||+++   |+||||||+|||++.     ++.+||+|||+|+.
T Consensus        82 ~~-~~~l~~~~~~--~~~~~~~~~~~~i~~q~~~~l~~lH~~g---iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_          82 LL-GPSLEDLLDL--CGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             CC-CCBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             ec-CCCHHHHHHh--hccchhhHHHHHHHHHHHHHHHHHHHCC---ceeccCCccceeecCcccccCCceEEcccceeEE
Confidence            98 7899988853  2346899999999999999999999988   999999999999975     57899999999998


Q ss_pred             cCCC
Q 005825          660 FGGD  663 (675)
Q Consensus       660 ~~~~  663 (675)
                      +...
T Consensus       156 ~~~~  159 (293)
T d1csna_         156 YRDP  159 (293)
T ss_dssp             SBCT
T ss_pred             cccC
Confidence            8543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2e-26  Score=238.28  Aligned_cols=152  Identities=28%  Similarity=0.452  Sum_probs=126.0

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-C-CcEEEEEEecCcC--ccCHHHHHHHHHHHHhc---CCCceeeEEEEEEe----
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-N-GEEVAVKRLSSQS--GQGLEEFKNEMLLIAKL---QHRNLVRILGCCIE----  575 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~-g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l---~H~nIv~l~g~~~~----  575 (675)
                      .++|++.++||+|+||+||+|+.. + ++.||||+++...  ......+.+|+.+++.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            478999999999999999999873 4 6779999986532  22334566777777665   79999999999863    


Q ss_pred             -CCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeee
Q 005825          576 -QGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDF  654 (675)
Q Consensus       576 -~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DF  654 (675)
                       ....+++|||++++.+.....  .....+++.....++.||+.||+|||+++   |+||||||+|||+++++.+||+||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~qi~~aL~yLH~~~---ivHrDiKp~NILi~~~~~~kl~df  160 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDK--VPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF  160 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHH--SCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSC
T ss_pred             cCceEEEEEEeccCCchhhhhh--ccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecCCCccEEEEcCCCCeeecch
Confidence             236799999999988765543  23456889999999999999999999988   999999999999999999999999


Q ss_pred             ccceecCCC
Q 005825          655 GLARMFGGD  663 (675)
Q Consensus       655 Gla~~~~~~  663 (675)
                      |+++.....
T Consensus       161 g~~~~~~~~  169 (305)
T d1blxa_         161 GLARIYSFQ  169 (305)
T ss_dssp             CSCCCCCGG
T ss_pred             hhhhhhccc
Confidence            999876443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=1.8e-25  Score=230.35  Aligned_cols=149  Identities=25%  Similarity=0.388  Sum_probs=122.9

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCce-eeEEEEEEeCCeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL-VRILGCCIEQGEKILILEY  585 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nI-v~l~g~~~~~~~~~lV~Ey  585 (675)
                      ++|++.++||+|+||+||+|+. .+++.||||.+....  ..+++..|++++++++|+|+ +.+.++..+++..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            5799999999999999999987 458999999987532  23568899999999987765 4555666778889999999


Q ss_pred             cCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEc---CCCCeEEeeeccceecCC
Q 005825          586 MPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLD---RDMNPKISDFGLARMFGG  662 (675)
Q Consensus       586 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~---~~~~~kl~DFGla~~~~~  662 (675)
                      +. ++|...+..  ....+++..+..++.|++.||+|||+++   ||||||||+|||++   .+..+||+|||+|+.+..
T Consensus        85 ~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~  158 (299)
T d1ckia_          85 LG-PSLEDLFNF--CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  158 (299)
T ss_dssp             CC-CBHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred             cC-Cchhhhhhh--ccCCCcHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence            95 555555532  2446899999999999999999999998   99999999999985   456799999999998865


Q ss_pred             Cc
Q 005825          663 DE  664 (675)
Q Consensus       663 ~~  664 (675)
                      ..
T Consensus       159 ~~  160 (299)
T d1ckia_         159 AR  160 (299)
T ss_dssp             TT
T ss_pred             cc
Confidence            43

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.3e-26  Score=239.00  Aligned_cols=149  Identities=29%  Similarity=0.377  Sum_probs=126.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEeC-----Ce
Q 005825          507 TENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIEQ-----GE  578 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~~-----~~  578 (675)
                      .++|++.++||+|+||+||+|+. .+|+.||||++++..  ....+++.+|+.+|++++|||||++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            57899999999999999999986 469999999997542  23446788999999999999999999998643     34


Q ss_pred             EEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          579 KILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       579 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .+++|||+.+|+|.+++..    ..+++.++..++.||+.||+|||+++   |+||||||+|||++.++.+|++|||+|.
T Consensus        97 ~~~i~~~~~gg~L~~~~~~----~~l~e~~~~~i~~qil~aL~~LH~~g---iiHrDiKp~NILi~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR  169 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCC----
T ss_pred             eEEEEEeecCCchhhhccc----ccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCCccccccccccccccccchhc
Confidence            5777888899999999842    35899999999999999999999998   9999999999999999999999999998


Q ss_pred             ecCC
Q 005825          659 MFGG  662 (675)
Q Consensus       659 ~~~~  662 (675)
                      ....
T Consensus       170 ~~~~  173 (348)
T d2gfsa1         170 HTDD  173 (348)
T ss_dssp             CCTG
T ss_pred             ccCc
Confidence            7643

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.8e-25  Score=234.54  Aligned_cols=148  Identities=28%  Similarity=0.368  Sum_probs=121.5

Q ss_pred             cCCcceeeeeCCcCceeEEEEEEc-CCcEEEEEEecCcC--ccCHHHHHHHHHHHHhcCCCceeeEEEEEEe------CC
Q 005825          507 TENFSMECKLGEGGFGPVYKGRLL-NGEEVAVKRLSSQS--GQGLEEFKNEMLLIAKLQHRNLVRILGCCIE------QG  577 (675)
Q Consensus       507 ~~~f~~~~~IG~G~fG~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H~nIv~l~g~~~~------~~  577 (675)
                      .++|++.++||+|+||+||+|+.. +|+.||||+++...  ....+++.+|+.++++++|||||++++++..      ..
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence            368999999999999999999875 59999999997542  2344578999999999999999999999964      36


Q ss_pred             eEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEeeeccc
Q 005825          578 EKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKISDFGLA  657 (675)
Q Consensus       578 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla  657 (675)
                      +.++||||+.++.+..+.      ..+++.....++.||+.||+|||+++   |+||||||+|||++.++.+||+|||++
T Consensus        96 ~~~iv~Ey~~~~l~~~~~------~~~~~~~i~~~~~qil~gl~~LH~~g---iiHrDlKP~Nil~~~~~~~kl~df~~~  166 (355)
T d2b1pa1          96 DVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA  166 (355)
T ss_dssp             EEEEEEECCSEEHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred             eeEEEEeccchHHHHhhh------cCCCHHHHHHHHHHHHHHHHHhhhcc---cccccCCccccccccccceeeechhhh
Confidence            889999999776555432      34788999999999999999999998   999999999999999999999999999


Q ss_pred             eecCCC
Q 005825          658 RMFGGD  663 (675)
Q Consensus       658 ~~~~~~  663 (675)
                      +.....
T Consensus       167 ~~~~~~  172 (355)
T d2b1pa1         167 RTAGTS  172 (355)
T ss_dssp             ------
T ss_pred             hccccc
Confidence            877543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.86  E-value=7.3e-22  Score=189.26  Aligned_cols=135  Identities=21%  Similarity=0.239  Sum_probs=107.0

Q ss_pred             ceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCc------------------cCHHHHHHHHHHHHhcCCCceeeEEEE
Q 005825          511 SMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSG------------------QGLEEFKNEMLLIAKLQHRNLVRILGC  572 (675)
Q Consensus       511 ~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~------------------~~~~~f~~E~~il~~l~H~nIv~l~g~  572 (675)
                      .+.++||+|+||+||+|+..+|++||||.++....                  .....+..|...+.++.|++++..+++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            56789999999999999998999999998753210                  001234568889999999999998866


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCceEecCCCCCCEEEcCCCCeEEe
Q 005825          573 CIEQGEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYSRFRIIHRDLKASNVLLDRDMNPKIS  652 (675)
Q Consensus       573 ~~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiHrDlkp~NILl~~~~~~kl~  652 (675)
                      .    ..+++|||+++..+..          +.......++.|++++|+|||+++   |+||||||+|||++++ .++|+
T Consensus        83 ~----~~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~~g---iiHrDiKP~NILv~~~-~~~li  144 (191)
T d1zara2          83 E----GNAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVSEE-GIWII  144 (191)
T ss_dssp             E----TTEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEETT-EEEEC
T ss_pred             c----CCEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHHhhCC---EEEccCChhheeeeCC-CEEEE
Confidence            3    2379999999876533          222334578999999999999988   9999999999999975 48999


Q ss_pred             eeccceecCCC
Q 005825          653 DFGLARMFGGD  663 (675)
Q Consensus       653 DFGla~~~~~~  663 (675)
                      |||+|+....+
T Consensus       145 DFG~a~~~~~~  155 (191)
T d1zara2         145 DFPQSVEVGEE  155 (191)
T ss_dssp             CCTTCEETTST
T ss_pred             ECCCcccCCCC
Confidence            99999887544

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.85  E-value=1.8e-21  Score=169.02  Aligned_cols=112  Identities=23%  Similarity=0.435  Sum_probs=95.8

Q ss_pred             cccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCC
Q 005825           26 ADTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQT  105 (675)
Q Consensus        26 ~~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~  105 (675)
                      +|+|.|||.|.+|+.|+|  |.|+|.|...|+     |.++.   +.++||.||++.|..  ++.|.|+.||+|+|+|. 
T Consensus         1 tDtL~~gq~L~~g~~l~~--g~~~l~~q~DGN-----Lvly~---~~~~vW~s~~~~~~~--~~~l~l~~dGnLvl~~~-   67 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE--GGYLFIIQNDCN-----LVLYD---NNRAVWASGTNGKAS--GCVLKMQNDGNLVIYSG-   67 (112)
T ss_dssp             CCEEETTEEECTTCEEEE--TTEEEEECTTSC-----EEEEE---TTEEEEECCCTTSCS--SEEEEECTTSCEEEEET-
T ss_pred             CCEecCCCEecCCCEEEE--CCEEEEEcCCCC-----EEEEc---CCcEEEEccCccCCC--CcEEEEeccccEEEEec-
Confidence            589999999999999985  999999998886     55654   368999999998854  47899999999999996 


Q ss_pred             CCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCch
Q 005825          106 NGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTD  155 (675)
Q Consensus       106 g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtD  155 (675)
                      +.++|++++.......+|+|+|+|||||++.     .+.++|||+.+|++
T Consensus        68 ~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~-----~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          68 SRAIWASNTNRQNGNYYLILQRDRNVVIYDN-----SNNAIWATHTNVGN  112 (112)
T ss_dssp             TEEEEECCCCCSCCCCEEEECTTSCEEEECT-----TSCEEEECCCCCCC
T ss_pred             CCeEEEEeeccCCCceEEEEcCCCCEEEECC-----CCcEEecCCCccCC
Confidence            5678888877655677899999999999985     56789999999975

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=5.5e-21  Score=201.74  Aligned_cols=151  Identities=23%  Similarity=0.308  Sum_probs=120.1

Q ss_pred             CCcceeeeeCCcCceeEEEEEE-cCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-----------CCceeeEEEEEEe
Q 005825          508 ENFSMECKLGEGGFGPVYKGRL-LNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-----------HRNLVRILGCCIE  575 (675)
Q Consensus       508 ~~f~~~~~IG~G~fG~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-----------H~nIv~l~g~~~~  575 (675)
                      ++|++.++||+|+||+||+|+. .+|+.||||++++. ....+.+.+|+.++++++           |+||+++++++..
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~-~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc-ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            3599999999999999999987 46999999999853 233467888999988875           4789999988864


Q ss_pred             C--CeEEEEEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHh-cCCCceEecCCCCCCEEEcCCCC----
Q 005825          576 Q--GEKILILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHH-YSRFRIIHRDLKASNVLLDRDMN----  648 (675)
Q Consensus       576 ~--~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlkp~NILl~~~~~----  648 (675)
                      .  ...+++|+++..+..............+.+.....++.||+.||+|||+ .+   |+||||||+||||+.++.    
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~---IvHrDlKp~NIll~~~~~~~~~  168 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENL  168 (362)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTE
T ss_pred             ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC---cccccCChhHeeeeccCccccc
Confidence            3  4667777777655443333222345567888999999999999999998 54   999999999999987654    


Q ss_pred             --eEEeeeccceecCC
Q 005825          649 --PKISDFGLARMFGG  662 (675)
Q Consensus       649 --~kl~DFGla~~~~~  662 (675)
                        +||+|||.|+....
T Consensus       169 ~~~kl~dfg~s~~~~~  184 (362)
T d1q8ya_         169 IQIKIADLGNACWYDE  184 (362)
T ss_dssp             EEEEECCCTTCEETTB
T ss_pred             ceeeEeeccccccccc
Confidence              99999999987643

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.83  E-value=1.9e-20  Score=161.09  Aligned_cols=107  Identities=20%  Similarity=0.374  Sum_probs=91.6

Q ss_pred             ccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCCC
Q 005825           27 DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTN  106 (675)
Q Consensus        27 ~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~g  106 (675)
                      |+|.+||.|.+|+.|.+  |.|.|+|...|+     |.++.   ..++||+||++.|... .+.|.|+.||+|||+|++|
T Consensus         2 ~~L~~g~~L~~g~~l~~--g~~~l~~q~dgn-----Lvl~~---~~~~vW~ant~~~~~~-~~~l~l~~dGnLvl~~~~g   70 (109)
T d1kj1a_           2 NLLTNGEGLYAGQSLDV--EPYHFIMQEDCN-----LVLYD---HSTSVWASNTGILGKK-GCKAVLQSDGNFVVYDAEG   70 (109)
T ss_dssp             CEEETTCEEETTCEEEE--TTEEEEECTTSC-----EEEEE---TTEEEEECCCCCTTCC-CCEEEECTTSCEEEECSSS
T ss_pred             CCccCCCEEeCCCEEEe--CCEEEEecCCCe-----EEEEe---CCEEEEEeCCCCCCce-eEEEEEcCCceEEEEeCCC
Confidence            68999999999999974  889999988776     45543   2688999999999863 5789999999999999999


Q ss_pred             CeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccC
Q 005825          107 GTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDY  152 (675)
Q Consensus       107 ~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~  152 (675)
                      .+||+|+++......+|+|+|+|||||+++        .+|||+-|
T Consensus        71 ~~vW~s~t~~~~~~~~l~L~ddGNlvly~~--------~~W~S~t~  108 (109)
T d1kj1a_          71 RSLWASHSVRGNGNYVLVLQEDGNVVIYGS--------DIWSTGTY  108 (109)
T ss_dssp             CEEEECCCCCCSSCCEEEECTTSCEEEECC--------EEEECCCC
T ss_pred             cEEEEEeeECCCCCEEEEEeCCCcEEEECC--------CEecCCCc
Confidence            999999987655667899999999999963        49999864

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.83  E-value=1.1e-20  Score=162.50  Aligned_cols=106  Identities=24%  Similarity=0.380  Sum_probs=91.9

Q ss_pred             ccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCCC
Q 005825           27 DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTN  106 (675)
Q Consensus        27 ~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~g  106 (675)
                      |+|.+||.|.+|+.|.  +|.|+|.|+..|+     |.|+..   .++||.||++.|-  ..+.|.|+.||+|+|.+++|
T Consensus         2 ~~L~~g~~L~~G~~l~--ng~~~l~~q~DGN-----Lvly~~---~~~vW~s~~~~~~--~~~~l~l~~~Gnlvl~~~~g   69 (108)
T d1jpca_           2 NILYSGETLSTGEFLN--YGSFVFIMQEDCN-----LVLYDV---DKPIWATNTGGLS--RSCFLSMQTDGNLVVYNPSN   69 (108)
T ss_dssp             CEEETTEEECTTCEEE--ETTEEEEECTTSC-----EEEEET---TEEEEECCCTTSC--SSCEEEECTTSCEEEECTTC
T ss_pred             CCccCCCEecCCCEEE--cCCEEEEECCCCe-----EEEEeC---CceeeEeCCCCCC--CccEEEEeccceEEEECCCc
Confidence            6899999999999995  6999999999986     667653   5889999999884  35689999999999999999


Q ss_pred             CeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccC
Q 005825          107 GTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDY  152 (675)
Q Consensus       107 ~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~  152 (675)
                      .+||++++.......+|+|+|+|||||++.        .+||||+|
T Consensus        70 ~~vWsS~t~~~~~~~~l~L~ddGNlVly~~--------~~W~S~t~  107 (108)
T d1jpca_          70 KPIWASNTGGQNGNYVCILQKDRNVVIYGT--------DRWATGTH  107 (108)
T ss_dssp             CEEEECCCCCSCSCEEEEECTTSCEEEEEC--------CCCCCCCC
T ss_pred             cceEEccccCCCCcEEEEEcCCCCEEEeCC--------CcccCCCC
Confidence            999999987655566799999999999973        48999988

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.72  E-value=3.4e-18  Score=149.17  Aligned_cols=102  Identities=19%  Similarity=0.303  Sum_probs=86.2

Q ss_pred             EEEEecCC-CcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCC
Q 005825           64 GIWFRKVP-DTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTT  142 (675)
Q Consensus        64 giw~~~~~-~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~  142 (675)
                      -|||..++ ++.+|++|++.|+.....+|.++.||+|||.+. +.++|++++.+......|+|+|+|||||++.     .
T Consensus        11 ~il~~~~~~~~~~~~l~~~q~l~~g~y~L~~q~DGNLvL~~~-~~~vW~s~t~~~~~~~~~~l~~~GnLvl~d~-----~   84 (120)
T d1dlpa2          11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCRAVLQPNGRMDVLTN-----Q   84 (120)
T ss_dssp             EECCCC--CCCCCCEECSSCCCBCSSCEEEEETTTEEEEEBT-TBCCSCCCCCSSCSSCEEEEETTTEEEEEET-----T
T ss_pred             eEEEcCCCCCCcccEEcCCCeeEcCCEEEEEcCCCcEEEecC-CcEEEEEccccCCCcEEEEEeCCeeEEEEcC-----C
Confidence            58999888 899999999999987777999999999999986 6789999987655667899999999999996     5


Q ss_pred             cceeeeeccCCchhhhccccccccccCCCceeEEEecCCCCCCCceeeeeecCCCCceEE
Q 005825          143 ENYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMC  202 (675)
Q Consensus       143 ~~~lWqSFd~PtDTlLpg~~l~~~~~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~  202 (675)
                      +.+|||||.                               +..+|.|.|.||+||+..++
T Consensus        85 ~~~lW~S~t-------------------------------~~~~~~~~l~Lq~DGnlvlY  113 (120)
T d1dlpa2          85 NIAVWTSGN-------------------------------SRSAGRYVFVLQPDRNLAIY  113 (120)
T ss_dssp             TEEEEECCC-------------------------------CCSSSCCEEEECSSSCEEEE
T ss_pred             CCEEEEeCC-------------------------------CCCCCcEEEEECCCCcEEEe
Confidence            689999973                               33567899999999996654

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.62  E-value=1.3e-16  Score=137.66  Aligned_cols=109  Identities=20%  Similarity=0.253  Sum_probs=89.2

Q ss_pred             EEEecCC-CcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCc
Q 005825           65 IWFRKVP-DTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTE  143 (675)
Q Consensus        65 iw~~~~~-~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~  143 (675)
                      |||.-.+ .+..|+.+++.++.....+|.|+.||||||++. +.++|++++.+ ..+..|.|+|+|||||++.     .+
T Consensus         3 ~~~~~~~~~~~~~tl~~~~~l~~g~~~l~~q~DGNLvL~~~-~~~vW~s~t~~-~~~~~l~l~~dGNLvl~d~-----~~   75 (115)
T d1dlpa1           3 ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDS-DVRVWASNTAG-ATGCRAVLQSDGLLVILTA-----QN   75 (115)
T ss_dssp             CCBCSSSSSCSCSCCCTTCEECSTTEEEEECTTSCEEEEES-SSEEECCCCCS-CSCCBCCBCSSSCBCCBCT-----TT
T ss_pred             EEEecCCCCCCcceecCCCcEEcCCEEEEECCCCeEEEEcC-CeeEEEcccCC-CCceEEEEeccCCEEEEcc-----CC
Confidence            6665333 677799999999987778999999999999984 78999999875 5578899999999999986     56


Q ss_pred             ceeeeeccCCchhhhccccccccccCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCc
Q 005825          144 NYLWQSFDYPTDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGE  215 (675)
Q Consensus       144 ~~lWqSFd~PtDTlLpg~~l~~~~~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~  215 (675)
                      .+||||+-                               +.++|.|.|.|++||+..++    +.++|.+|.
T Consensus        76 ~~vWsS~t-------------------------------~~~~g~y~l~Lq~DGNlvlY----~~~~Wssgt  112 (115)
T d1dlpa1          76 TIRWSSGT-------------------------------KGSIGNYVLVLQPDRTVTIY----GPGLWDSGT  112 (115)
T ss_dssp             CCSCCCCC-------------------------------CCCSSCCEEEECSSSCEEEE----CSEEEECSC
T ss_pred             CEEEEcCC-------------------------------CCCCCCEEEEECCCCcEEEe----CCCeecCCC
Confidence            79999852                               34678999999999996544    347898875

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.60  E-value=1.7e-15  Score=131.50  Aligned_cols=103  Identities=17%  Similarity=0.365  Sum_probs=82.8

Q ss_pred             ccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCCC
Q 005825           27 DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTN  106 (675)
Q Consensus        27 ~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~g  106 (675)
                      ++|.++|+|    ...+..|.|.|.|...|+     |.+ |.  +.++||.||+..|..  .+.|.|+.||+|+|.|.+|
T Consensus        15 ~~l~~~q~l----~~~~~~~~y~l~mQ~DGN-----LVL-y~--~~~~vWssnt~~~~~--~~~l~l~~dGnLvL~d~~g   80 (119)
T d1b2pa_          15 QILHATESL----EILFGTHVYRFIMQTDCN-----LVL-YD--NNNPIWATNTGGLGN--GCRAVLQPDGVLVVITNEN   80 (119)
T ss_dssp             CEEETTCEE----EEEETTEEEEEEECTTSC-----EEE-EE--TTEEEEECCCTTSCS--SCEEEECTTSCEEEECTTC
T ss_pred             CEEeCCCeE----EEecCCceEEEEECCCCc-----EEE-EE--CCeEEEEecCCCCCc--ceEEEEEeCCCEEEECCCC
Confidence            456666655    346789999999999987     444 33  268899999987743  4789999999999999999


Q ss_pred             CeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeecc
Q 005825          107 GTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFD  151 (675)
Q Consensus       107 ~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd  151 (675)
                      .+||++++.+.....+|+|+|+|||||++.        ++|||-.
T Consensus        81 ~~vWsS~t~~~~~~~~l~Lq~DGNlvlYg~--------~~W~S~T  117 (119)
T d1b2pa_          81 VTVWQSPVAGKAGHYVLVLQPDRNVVIYGD--------ALWATQT  117 (119)
T ss_dssp             CEEEECSCCCCSSCEEEEECTTSCEEEEES--------EEEECCC
T ss_pred             cEEEECCCcCCCCceEEEEcCCCCEEEECC--------CEeccCC
Confidence            999999987655566799999999999863        6999853

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.40  E-value=6.9e-14  Score=120.26  Aligned_cols=97  Identities=24%  Similarity=0.365  Sum_probs=76.9

Q ss_pred             CcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCCCCeEEEe
Q 005825           33 SFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTNGTIWST  112 (675)
Q Consensus        33 ~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~g~~vWss  112 (675)
                      |.|.++|.|  .+|.|.|.|...|+     |.++.   +.++||.+|...+   ..+.+.|..||+|||.|.++.+||++
T Consensus        15 ~tl~~~~~l--~~g~~~l~~q~DGN-----LvL~~---~~~~vW~s~t~~~---~~~~l~l~~dGNLvl~d~~~~~vWsS   81 (115)
T d1dlpa1          15 QTLHAAQSL--ELSSFRFTMQSDCN-----LVLFD---SDVRVWASNTAGA---TGCRAVLQSDGLLVILTAQNTIRWSS   81 (115)
T ss_dssp             SCCCTTCEE--CSTTEEEEECTTSC-----EEEEE---SSSEEECCCCCSC---SCCBCCBCSSSCBCCBCTTTCCSCCC
T ss_pred             ceecCCCcE--EcCCEEEEECCCCe-----EEEEc---CCeeEEEcccCCC---CceEEEEeccCCEEEEccCCCEEEEc
Confidence            445555555  46779999998887     56654   3578999997542   35789999999999999999999999


Q ss_pred             ccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeec
Q 005825          113 NASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSF  150 (675)
Q Consensus       113 ~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSF  150 (675)
                      ++.......+++|+++|||||++.        ++|+|-
T Consensus        82 ~t~~~~g~y~l~Lq~DGNlvlY~~--------~~Wssg  111 (115)
T d1dlpa1          82 GTKGSIGNYVLVLQPDRTVTIYGP--------GLWDSG  111 (115)
T ss_dssp             CCCCCSSCCEEEECSSSCEEEECS--------EEEECS
T ss_pred             CCCCCCCCEEEEECCCCcEEEeCC--------CeecCC
Confidence            987656666899999999999862        699984

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.15  E-value=6.2e-11  Score=102.50  Aligned_cols=97  Identities=23%  Similarity=0.370  Sum_probs=71.5

Q ss_pred             ccccCCCcCCCCCEEEeCCCeEEEeeeCCCCCCCeEEEEEEecCCCcEEEEecCCCCCCCCcceEEEeeCCeEEEEeCCC
Q 005825           27 DTVTPASFIRDGEKLVSSSQRFELGFFSPGKSKSRYLGIWFRKVPDTVVWVANRDRPISDHNAVLTISNNGKLVLLNQTN  106 (675)
Q Consensus        27 ~~i~~g~~l~~~~~l~S~~g~F~lGF~~~~~~~~~~lgiw~~~~~~tvVW~Anr~~pv~~~~~~l~l~~~G~Lvl~~~~g  106 (675)
                      +++.++|+|..        |.|.|.|-..|+     |.++.   +..+||.++-.  ..+..+.+.|..+|+|||+|.++
T Consensus        24 ~~l~~~q~l~~--------g~y~L~~q~DGN-----LvL~~---~~~~vW~s~t~--~~~~~~~~~l~~~GnLvl~d~~~   85 (120)
T d1dlpa2          24 QTLHATQSLQL--------SPYRLSMETDCN-----LVLFD---RDDRVWSTNTA--GKGTGCRAVLQPNGRMDVLTNQN   85 (120)
T ss_dssp             CEECSSCCCBC--------SSCEEEEETTTE-----EEEEB---TTBCCSCCCCC--SSCSSCEEEEETTTEEEEEETTT
T ss_pred             cEEcCCCeeEc--------CCEEEEEcCCCc-----EEEec---CCcEEEEEccc--cCCCcEEEEEeCCeeEEEEcCCC
Confidence            45555555554        557777766654     44442   24678988743  33445789999999999999999


Q ss_pred             CeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeee
Q 005825          107 GTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQS  149 (675)
Q Consensus       107 ~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqS  149 (675)
                      .++|++++.......+++|+++|||||++.        .+|.|
T Consensus        86 ~~lW~S~t~~~~~~~~l~Lq~DGnlvlY~~--------~~W~t  120 (120)
T d1dlpa2          86 IAVWTSGNSRSAGRYVFVLQPDRNLAIYGG--------ALWTT  120 (120)
T ss_dssp             EEEEECCCCCSSSCCEEEECSSSCEEEECC--------CCCBC
T ss_pred             CEEEEeCCCCCCCcEEEEECCCCcEEEeCC--------CcccC
Confidence            999999987655666899999999999962        48875

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.12  E-value=1.5e-10  Score=99.70  Aligned_cols=85  Identities=25%  Similarity=0.308  Sum_probs=67.5

Q ss_pred             eEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccccccccccC
Q 005825           90 VLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLKN  169 (675)
Q Consensus        90 ~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~~t  169 (675)
                      .|.+..||||||.++ +.++|++++.+...+..+.|.++|||||++.     .+.+||+|.                   
T Consensus        33 ~l~mQ~DGNLVLy~~-~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~-----~g~~vWsS~-------------------   87 (119)
T d1b2pa_          33 RFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITN-----ENVTVWQSP-------------------   87 (119)
T ss_dssp             EEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECT-----TCCEEEECS-------------------
T ss_pred             EEEECCCCcEEEEEC-CeEEEEecCCCCCcceEEEEEeCCCEEEECC-----CCcEEEECC-------------------
Confidence            688999999999876 5689999987655578899999999999986     567899751                   


Q ss_pred             CCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCc
Q 005825          170 RRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGE  215 (675)
Q Consensus       170 g~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~  215 (675)
                                  +.-+.|.|.+.||+||+..++  .  .+.|.++.
T Consensus        88 ------------t~~~~~~~~l~Lq~DGNlvlY--g--~~~W~S~T  117 (119)
T d1b2pa_          88 ------------VAGKAGHYVLVLQPDRNVVIY--G--DALWATQT  117 (119)
T ss_dssp             ------------CCCCSSCEEEEECTTSCEEEE--E--SEEEECCC
T ss_pred             ------------CcCCCCceEEEEcCCCCEEEE--C--CCEeccCC
Confidence                        112456789999999997664  2  46888765

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.06  E-value=2.6e-10  Score=96.77  Aligned_cols=85  Identities=22%  Similarity=0.409  Sum_probs=66.4

Q ss_pred             ceEEEeeCCeEEEEeCCCCeEEEeccCCCCCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhcccccccccc
Q 005825           89 AVLTISNNGKLVLLNQTNGTIWSTNASSEAKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDLK  168 (675)
Q Consensus        89 ~~l~l~~~G~Lvl~~~~g~~vWss~~~~~~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~~  168 (675)
                      -+|.++.||||||++. +.+||++++.+......+.|+++|||||++.     .+.+||+|                   
T Consensus        21 ~~l~~q~DGNLvly~~-~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~-----~g~~vWsS-------------------   75 (108)
T d1jpca_          21 FVFIMQEDCNLVLYDV-DKPIWATNTGGLSRSCFLSMQTDGNLVVYNP-----SNKPIWAS-------------------   75 (108)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECT-----TCCEEEEC-------------------
T ss_pred             EEEEECCCCeEEEEeC-CceeeEeCCCCCCCccEEEEeccceEEEECC-----CccceEEc-------------------
Confidence            4789999999999874 6799999987655567899999999999986     56889986                   


Q ss_pred             CCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeC
Q 005825          169 NRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTG  214 (675)
Q Consensus       169 tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g  214 (675)
                                  .+....+.|.+.|+++|+..++  .  .+.|.++
T Consensus        76 ------------~t~~~~~~~~l~L~ddGNlVly--~--~~~W~S~  105 (108)
T d1jpca_          76 ------------NTGGQNGNYVCILQKDRNVVIY--G--TDRWATG  105 (108)
T ss_dssp             ------------CCCCSCSCEEEEECTTSCEEEE--E--CCCCCCC
T ss_pred             ------------cccCCCCcEEEEEcCCCCEEEe--C--CCcccCC
Confidence                        1122456788999999996655  3  2466655

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=98.98  E-value=1.6e-09  Score=91.90  Aligned_cols=87  Identities=23%  Similarity=0.360  Sum_probs=66.6

Q ss_pred             ceEEEeeCCeEEEEeCCCCeEEEeccCCC-CCCceEEEccCCCEEEEeCCCCCCCcceeeeeccCCchhhhccccccccc
Q 005825           89 AVLTISNNGKLVLLNQTNGTIWSTNASSE-AKNPVAQLRDDGNLVIRDNSSVNTTENYLWQSFDYPTDTLLQDMKMGWDL  167 (675)
Q Consensus        89 ~~l~l~~~G~Lvl~~~~g~~vWss~~~~~-~~~~~a~L~d~GNlVl~~~~~~~~~~~~lWqSFd~PtDTlLpg~~l~~~~  167 (675)
                      -.|.+..||+|||.+ .+.+||++++... .....+.|.++|||||++.     .+.++|+|                  
T Consensus        21 ~~l~~q~dgnLvl~~-~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~-----~g~~vW~s------------------   76 (109)
T d1kj1a_          21 YHFIMQEDCNLVLYD-HSTSVWASNTGILGKKGCKAVLQSDGNFVVYDA-----EGRSLWAS------------------   76 (109)
T ss_dssp             EEEEECTTSCEEEEE-TTEEEEECCCCCTTCCCCEEEECTTSCEEEECS-----SSCEEEEC------------------
T ss_pred             EEEEecCCCeEEEEe-CCEEEEEeCCCCCCceeEEEEEcCCceEEEEeC-----CCcEEEEE------------------
Confidence            568899999999987 5689999998643 3356799999999999986     56889986                  


Q ss_pred             cCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCcc
Q 005825          168 KNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEW  216 (675)
Q Consensus       168 ~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~w  216 (675)
                                   .+....|.|.+.|+++|+..++  +  .+.|.++.+
T Consensus        77 -------------~t~~~~~~~~l~L~ddGNlvly--~--~~~W~S~t~  108 (109)
T d1kj1a_          77 -------------HSVRGNGNYVLVLQEDGNVVIY--G--SDIWSTGTY  108 (109)
T ss_dssp             -------------CCCCCSSCCEEEECTTSCEEEE--C--CEEEECCCC
T ss_pred             -------------eeECCCCCEEEEEeCCCcEEEE--C--CCEecCCCc
Confidence                         1112356789999999996654  3  368887653

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=98.79  E-value=2.5e-08  Score=84.93  Aligned_cols=112  Identities=8%  Similarity=-0.026  Sum_probs=72.6

Q ss_pred             chhhhccccccccccCCCceeEEEecCCCCCCCceeeeeecCCCCceEEEEcCCeeeeeeCccCCCceeeeeecCceeeE
Q 005825          154 TDTLLQDMKMGWDLKNRRERYLSSWRSDDDPSPGKFTNRLDIHVLPKMCTFNGSVKYTCTGEWTGDGFVSALSNTNFLYK  233 (675)
Q Consensus       154 tDTlLpg~~l~~~~~tg~~~~l~S~~s~~dps~G~y~l~~~~~~~~~~~~~~~~~~y~~~g~w~~~~~~~~~~~~~~~~~  233 (675)
                      ||||+|||.|..+      ..|+         .|.|.|.|+.||++.  ++.....+|.++......-..+.+.....+.
T Consensus         1 tDtL~~gq~L~~g------~~l~---------~g~~~l~~q~DGNLv--ly~~~~~vW~s~~~~~~~~~~l~l~~dGnLv   63 (112)
T d1xd5a_           1 SDRLNSGHQLDTG------GSLA---------EGGYLFIIQNDCNLV--LYDNNRAVWASGTNGKASGCVLKMQNDGNLV   63 (112)
T ss_dssp             CCEEETTEEECTT------CEEE---------ETTEEEEECTTSCEE--EEETTEEEEECCCTTSCSSEEEEECTTSCEE
T ss_pred             CCEecCCCEecCC------CEEE---------ECCEEEEEcCCCCEE--EEcCCcEEEEccCccCCCCcEEEEeccccEE
Confidence            7999999999876      4464         399999999999854  4677789998876543222223333322221


Q ss_pred             EEEeeecCeeEEEEeecCCCceEEEEECcCccEEEEEecCCCCceEEeeeccCCCCC
Q 005825          234 QFLVENQDEISYWYEPYNRPSIMTLKLSPSGFVTRQLWNEDSNEWDELFSIPDDYCG  290 (675)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~G~l~~~~~~~~~~~W~~~~~~p~~~C~  290 (675)
                         +.+.....+..........++++|+.||+|++|.     ......|+...+.|.
T Consensus        64 ---l~~~~~~~w~s~t~~~~~~~~l~L~ddGNlvly~-----~~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          64 ---IYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYD-----NSNNAIWATHTNVGN  112 (112)
T ss_dssp             ---EEETTEEEEECCCCCSCCCCEEEECTTSCEEEEC-----TTSCEEEECCCCCCC
T ss_pred             ---EEecCCeEEEEeeccCCCceEEEEcCCCCEEEEC-----CCCcEEecCCCccCC
Confidence               1123333333333334456799999999999993     123578988877663

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.58  E-value=2.5e-07  Score=90.80  Aligned_cols=148  Identities=17%  Similarity=0.106  Sum_probs=103.7

Q ss_pred             HHHhcCCcceeeeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC-CCceeeEEEEEEeCCeEEE
Q 005825          503 VAAATENFSMECKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ-HRNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       503 ~~~~~~~f~~~~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~-H~nIv~l~g~~~~~~~~~l  581 (675)
                      +......|+..+..+-++...||+... +++.+.+|+...........+..|...+..+. +--+.+++.+..+++..++
T Consensus         9 l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l   87 (263)
T d1j7la_           9 LKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEE
Confidence            444456777666554455678998865 55667888887654445556788988887774 5557788888888899999


Q ss_pred             EEEecCCCCHHHHhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 005825          582 ILEYMPNKSLDVFLFDPTKKRLLGWQARIGIIEGIAQGLLYLHHYS----------------------------------  627 (675)
Q Consensus       582 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----------------------------------  627 (675)
                      |||+++|..+.......     .   ....++.++++.|+.||+..                                  
T Consensus        88 v~~~l~G~~~~~~~~~~-----~---~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (263)
T d1j7la_          88 LMSEADGVLCSEEYEDE-----Q---SPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE  159 (263)
T ss_dssp             EEECCSSEEHHHHTTTC-----S---CHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGS
T ss_pred             EEEeccccccccccccc-----c---cHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhccc
Confidence            99999999886554211     1   11224455555555555321                                  


Q ss_pred             ----------------------CCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          628 ----------------------RFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       628 ----------------------~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                                            +..++|+|+.|.|||+++++.+-|.||+.+..
T Consensus       160 ~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             ccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                                  12379999999999999887778999998875

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.98  E-value=1.5e-05  Score=77.04  Aligned_cols=143  Identities=17%  Similarity=0.139  Sum_probs=88.2

Q ss_pred             eeeCCcC-ceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcC--CCceeeEEEEEEeCCeEEEEEEecCCCC
Q 005825          514 CKLGEGG-FGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQ--HRNLVRILGCCIEQGEKILILEYMPNKS  590 (675)
Q Consensus       514 ~~IG~G~-fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~--H~nIv~l~g~~~~~~~~~lV~Ey~~~gs  590 (675)
                      +.+..|. -..||+....++..+.+|.-....   ...+..|...++.+.  ...+.+++.+..+++..++|||+++|.+
T Consensus        16 ~~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~   92 (255)
T d1nd4a_          16 AQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD   92 (255)
T ss_dssp             EECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred             EEcCCcccCCeEEEEEeCCCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccc
Confidence            3455554 468999988788888889866432   235677887777664  3446778888888889999999999876


Q ss_pred             HHHHh-----------------cCCC-CcccC--CHHHHHHHHH--------------------HHHHHHHHHHhc----
Q 005825          591 LDVFL-----------------FDPT-KKRLL--GWQARIGIIE--------------------GIAQGLLYLHHY----  626 (675)
Q Consensus       591 L~~~l-----------------~~~~-~~~~l--~~~~~~~i~~--------------------~ia~~L~yLH~~----  626 (675)
                      +.+..                 +... .....  .+.....-..                    .....+..+...    
T Consensus        93 ~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  172 (255)
T d1nd4a_          93 LLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDG  172 (255)
T ss_dssp             TTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSS
T ss_pred             cccccccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCCcc
Confidence            53211                 1000 00000  0000000000                    011223333322    


Q ss_pred             CCCceEecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          627 SRFRIIHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       627 ~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      .+..++|+|+.|.|||++++..+-|+||+.+..
T Consensus       173 ~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         173 EDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             CCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence            122379999999999999887788999998875

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.46  E-value=0.00019  Score=74.21  Aligned_cols=76  Identities=11%  Similarity=0.155  Sum_probs=50.1

Q ss_pred             eeeeCCcCceeEEEEEEcC-CcEEEEEEecCc-------CccCHHHHHHHHHHHHhcC-C--CceeeEEEEEEeCCeEEE
Q 005825          513 ECKLGEGGFGPVYKGRLLN-GEEVAVKRLSSQ-------SGQGLEEFKNEMLLIAKLQ-H--RNLVRILGCCIEQGEKIL  581 (675)
Q Consensus       513 ~~~IG~G~fG~Vy~~~~~~-g~~vAvK~l~~~-------~~~~~~~f~~E~~il~~l~-H--~nIv~l~g~~~~~~~~~l  581 (675)
                      .+.||.|....||+....+ ++.+.||.-...       -+....+...|...|+.+. +  ..+.+++.+  +++..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            3579999999999998754 678999964321       1223445566887777662 3  346666655  4556689


Q ss_pred             EEEecCCCC
Q 005825          582 ILEYMPNKS  590 (675)
Q Consensus       582 V~Ey~~~gs  590 (675)
                      |||++++..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999998754

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.0014  Score=65.42  Aligned_cols=135  Identities=13%  Similarity=0.130  Sum_probs=79.3

Q ss_pred             eeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCce--eeEE-----EEEEeCCeEEEEEEecCCCCHH--
Q 005825          522 GPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL--VRIL-----GCCIEQGEKILILEYMPNKSLD--  592 (675)
Q Consensus       522 G~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nI--v~l~-----g~~~~~~~~~lV~Ey~~~gsL~--  592 (675)
                      -.||+.+..+|+.+++|.-+.. ....+++..|...+..|....+  +..+     ......+..+.++++++|..++  
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~~  114 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEAD  114 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCSS
T ss_pred             ceeEEEEcCCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCCC
Confidence            5799999999999999987653 2345778889888877743222  1111     1123456788999999875431  


Q ss_pred             ---HH-------------hcC--CCCcccCCHH-------------------HHHHHHHHHHHHHHHHHh----cCCCce
Q 005825          593 ---VF-------------LFD--PTKKRLLGWQ-------------------ARIGIIEGIAQGLLYLHH----YSRFRI  631 (675)
Q Consensus       593 ---~~-------------l~~--~~~~~~l~~~-------------------~~~~i~~~ia~~L~yLH~----~~~~~i  631 (675)
                         .+             ...  .......++.                   .+..+...+.+.++.+..    ..+..+
T Consensus       115 ~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~l  194 (325)
T d1zyla1         115 NIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLR  194 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEE
T ss_pred             CHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCcee
Confidence               11             000  0111111111                   111122222333334332    234568


Q ss_pred             EecCCCCCCEEEcCCCCeEEeeecccee
Q 005825          632 IHRDLKASNVLLDRDMNPKISDFGLARM  659 (675)
Q Consensus       632 iHrDlkp~NILl~~~~~~kl~DFGla~~  659 (675)
                      ||+|+.|.|||++++  ..+.||+.|..
T Consensus       195 iHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         195 LHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             CCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             ecCCCCcccEEEeCC--ceEEechhccc
Confidence            999999999999754  46899998874

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.60  E-value=0.0022  Score=65.87  Aligned_cols=76  Identities=16%  Similarity=0.252  Sum_probs=50.7

Q ss_pred             CcceeeeeCCcCceeEEEEEEcCC--------cEEEEEEecCcCccCHHHHHHHHHHHHhcCCCc-eeeEEEEEEeCCeE
Q 005825          509 NFSMECKLGEGGFGPVYKGRLLNG--------EEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRN-LVRILGCCIEQGEK  579 (675)
Q Consensus       509 ~f~~~~~IG~G~fG~Vy~~~~~~g--------~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~n-Iv~l~g~~~~~~~~  579 (675)
                      .+++ +.|+.|---.+|+....++        +.|.+++.. . ........+|..+++.+.-.+ ..++++++.+    
T Consensus        44 ~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~-~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----  116 (395)
T d1nw1a_          44 HLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-N-PETESHLVAESVIFTLLSERHLGPKLYGIFSG----  116 (395)
T ss_dssp             GEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-S-CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred             ceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-C-cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----
Confidence            4444 6788888899999987542        345555543 2 233445668888888885334 4578887743    


Q ss_pred             EEEEEecCCCCH
Q 005825          580 ILILEYMPNKSL  591 (675)
Q Consensus       580 ~lV~Ey~~~gsL  591 (675)
                      .+||||++|..|
T Consensus       117 g~I~efi~g~~l  128 (395)
T d1nw1a_         117 GRLEEYIPSRPL  128 (395)
T ss_dssp             EEEECCCCEEEC
T ss_pred             ceEEEEeccccC
Confidence            688999987654

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.24  E-value=0.065  Score=52.30  Aligned_cols=157  Identities=13%  Similarity=0.038  Sum_probs=80.1

Q ss_pred             cHHHHHHhcCCccee-----eeeCCcCceeEEEEEEcCCcEEEEEEecCcCccCHHHHHHHHHHHHhcCCCce--eeEEE
Q 005825          499 SLASVAAATENFSME-----CKLGEGGFGPVYKGRLLNGEEVAVKRLSSQSGQGLEEFKNEMLLIAKLQHRNL--VRILG  571 (675)
Q Consensus       499 ~~~~~~~~~~~f~~~-----~~IG~G~fG~Vy~~~~~~g~~vAvK~l~~~~~~~~~~f~~E~~il~~l~H~nI--v~l~g  571 (675)
                      +..++.....+|.+.     +.|..|---+.|+.+..+| .+++|+.....  ..+++..|++++..+.+.++  ...+-
T Consensus         4 s~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi~   80 (316)
T d2ppqa1           4 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLP   80 (316)
T ss_dssp             CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred             CHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccce
Confidence            344555666677653     3355676688899987665 48888876432  22344556666666532221  11110


Q ss_pred             ------EEEeCCeEEEEEEecCCCCHHHH--------------hc----C--CC-CcccCCH-----------------H
Q 005825          572 ------CCIEQGEKILILEYMPNKSLDVF--------------LF----D--PT-KKRLLGW-----------------Q  607 (675)
Q Consensus       572 ------~~~~~~~~~lV~Ey~~~gsL~~~--------------l~----~--~~-~~~~l~~-----------------~  607 (675)
                            +.........+++++.+......              ++    .  .. ......+                 .
T Consensus        81 ~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (316)
T d2ppqa1          81 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK  160 (316)
T ss_dssp             BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred             ecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcch
Confidence                  01224456677777776543110              00    0  00 0000000                 0


Q ss_pred             HHHHHHHHHHHHHHHHHh-cCCCceEecCCCCCCEEEcCCCCeEEeeeccce
Q 005825          608 ARIGIIEGIAQGLLYLHH-YSRFRIIHRDLKASNVLLDRDMNPKISDFGLAR  658 (675)
Q Consensus       608 ~~~~i~~~ia~~L~yLH~-~~~~~iiHrDlkp~NILl~~~~~~kl~DFGla~  658 (675)
                      .....+..+...+.-.+. .-+.++||+|+.+.||+++.+...-|.||+.|.
T Consensus       161 ~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         161 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence            011111112222222221 234459999999999999998878899999886

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.015  Score=36.00  Aligned_cols=32  Identities=31%  Similarity=0.575  Sum_probs=25.7

Q ss_pred             CCCCCCccCCCCcccCCC-CCCCCCccCCCccCC
Q 005825          287 DYCGKYGYCGANTICGPD-QKPMCQCLEGFRLKS  319 (675)
Q Consensus       287 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~~  319 (675)
                      |+|.+-..||. |-|+.- ..-.|.|-+||+|..
T Consensus         2 dECsignpCGn-GTCtNviGgFec~C~~GFepgp   34 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP   34 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred             CccccCCccCC-ceeeecccceEEeecCCcCCCc
Confidence            67999999994 889643 455799999999864

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.24  E-value=0.076  Score=34.99  Aligned_cols=31  Identities=29%  Similarity=0.551  Sum_probs=24.2

Q ss_pred             CCCCC-CccCCCCcccCCC-CCCCCCccCCCcc
Q 005825          287 DYCGK-YGYCGANTICGPD-QKPMCQCLEGFRL  317 (675)
Q Consensus       287 ~~C~~-~~~CG~~g~C~~~-~~~~C~C~~Gf~~  317 (675)
                      |+|.. ...|..+|.|... ..-.|.|++||+-
T Consensus         4 deC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G   36 (42)
T d2vj3a1           4 DECSLGANPCEHAGKCINTLGSFECQCLQGYTG   36 (42)
T ss_dssp             CTTTSSSCSSSTTCEEEECSSSEEEECCTTEES
T ss_pred             ccccCCCCCCCCCcEeECCCCCEEeECCCCCcC
Confidence            66875 5789999999743 3457999999983

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.18  E-value=0.19  Score=32.35  Aligned_cols=31  Identities=35%  Similarity=0.715  Sum_probs=23.5

Q ss_pred             CCCCCCccCCCCcccCCC-CCCCCCccCCCccC
Q 005825          287 DYCGKYGYCGANTICGPD-QKPMCQCLEGFRLK  318 (675)
Q Consensus       287 ~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~~  318 (675)
                      |+|. ...|...|.|... ..-.|.|++||+-.
T Consensus         1 D~C~-~~PC~ngg~C~~~~~~y~C~C~~G~~G~   32 (39)
T d1xkba1           1 DQCE-TSPCQNQGKCKDGLGEYTCTCLEGFEGK   32 (39)
T ss_dssp             CTTT-TCCCCSSCEECCCSSSCCEECCTTEETT
T ss_pred             CcCC-CCCCCCCcEEECCCCCEEEECCCCCCcC
Confidence            4576 4779999999754 45689999999843

>d1dx5i2 g.3.11.1 (I:388-422) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.18  E-value=0.17  Score=30.47  Aligned_cols=19  Identities=37%  Similarity=1.013  Sum_probs=14.4

Q ss_pred             ccCCCCCCCCCccCCCccC
Q 005825          300 ICGPDQKPMCQCLEGFRLK  318 (675)
Q Consensus       300 ~C~~~~~~~C~C~~Gf~~~  318 (675)
                      .|+.+....|+||+||...
T Consensus        11 dCdP~~p~~C~CPeGyIld   29 (35)
T d1dx5i2          11 DCDPNTQASCECPEGYILD   29 (35)
T ss_dssp             EECTTSTTCEECCTTEEEE
T ss_pred             ccCCCCCCcccCCCceEec
Confidence            3555666789999999864

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.29  E-value=0.53  Score=30.85  Aligned_cols=31  Identities=23%  Similarity=0.384  Sum_probs=23.5

Q ss_pred             CCCCCCCccCCCCcccCCC-CCCCCCccCCCcc
Q 005825          286 DDYCGKYGYCGANTICGPD-QKPMCQCLEGFRL  317 (675)
Q Consensus       286 ~~~C~~~~~CG~~g~C~~~-~~~~C~C~~Gf~~  317 (675)
                      .|+|.... |+.++.|... ++-.|.|++||+.
T Consensus         5 idEC~~~~-~~~~~~C~Nt~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1           5 MDECKEPD-VCKHGQCINTDGSYRCECPFGYIL   36 (43)
T ss_dssp             CCSSSSTT-SCSSSCCCCCSSCCCCCCCTTEEE
T ss_pred             eeccCCcC-CCCCCEeECCCCCeEeECCCCccc
Confidence            47897654 5578999754 4568999999986