Query 005830
Match_columns 675
No_of_seqs 322 out of 2736
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 14:23:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005830.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005830hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 8E-116 2E-120 933.0 55.1 645 18-669 3-762 (972)
2 TIGR01647 ATPase-IIIA_H plasma 100.0 6E-114 1E-118 987.2 72.8 620 37-673 1-622 (755)
3 PRK10517 magnesium-transportin 100.0 5E-113 1E-117 990.5 74.1 640 19-674 49-726 (902)
4 PRK15122 magnesium-transportin 100.0 3E-112 6E-117 985.8 75.3 646 19-673 27-725 (903)
5 TIGR01524 ATPase-IIIB_Mg magne 100.0 5E-112 1E-116 983.4 75.2 640 18-673 14-690 (867)
6 COG0474 MgtA Cation transport 100.0 1E-113 3E-118 998.3 62.4 648 16-671 20-725 (917)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 4E-112 9E-117 994.6 72.1 646 16-671 4-832 (1053)
8 KOG0205 Plasma membrane H+-tra 100.0 6E-114 1E-118 890.1 43.9 658 8-665 7-664 (942)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 3E-109 6E-114 974.2 76.8 666 5-671 2-770 (997)
10 TIGR01517 ATPase-IIB_Ca plasma 100.0 5E-109 1E-113 970.0 73.8 645 22-669 42-753 (941)
11 TIGR01522 ATPase-IIA2_Ca golgi 100.0 3E-107 6E-112 949.6 74.0 630 18-666 3-699 (884)
12 KOG0204 Calcium transporting A 100.0 4E-108 9E-113 872.7 45.9 643 23-666 102-820 (1034)
13 TIGR01657 P-ATPase-V P-type AT 100.0 2E-103 5E-108 929.9 63.6 627 35-674 137-889 (1054)
14 TIGR01116 ATPase-IIA1_Ca sarco 100.0 6.2E-99 1E-103 881.2 67.2 601 66-668 1-713 (917)
15 KOG0203 Na+/K+ ATPase, alpha s 100.0 1.1E-98 2E-103 799.5 29.8 671 3-674 22-796 (1019)
16 PRK14010 potassium-transportin 100.0 4.6E-93 1E-97 787.8 57.8 541 68-665 28-583 (673)
17 PRK01122 potassium-transportin 100.0 4.2E-91 9.1E-96 772.9 62.3 536 68-659 29-581 (679)
18 TIGR01652 ATPase-Plipid phosph 100.0 2.4E-91 5.2E-96 830.4 52.6 615 50-673 1-856 (1057)
19 KOG0208 Cation transport ATPas 100.0 8.8E-91 1.9E-95 750.1 49.2 628 26-666 149-931 (1140)
20 COG2217 ZntA Cation transport 100.0 7.8E-89 1.7E-93 753.9 55.8 508 97-668 173-682 (713)
21 TIGR01497 kdpB K+-transporting 100.0 5.1E-87 1.1E-91 738.4 61.1 538 68-660 28-583 (675)
22 PLN03190 aminophospholipid tra 100.0 1.8E-87 3.8E-92 788.4 58.2 617 48-674 85-960 (1178)
23 PRK11033 zntA zinc/cadmium/mer 100.0 2.7E-82 5.7E-87 723.8 59.4 502 97-666 205-709 (741)
24 KOG0207 Cation transport ATPas 100.0 7.1E-84 1.5E-88 697.5 39.1 522 95-673 338-873 (951)
25 TIGR01494 ATPase_P-type ATPase 100.0 9.6E-79 2.1E-83 673.3 55.1 475 106-668 4-484 (499)
26 TIGR01511 ATPase-IB1_Cu copper 100.0 1.4E-77 3E-82 667.5 59.0 496 97-669 53-550 (562)
27 TIGR01525 ATPase-IB_hvy heavy 100.0 2E-77 4.2E-82 668.7 59.1 524 78-673 5-534 (556)
28 TIGR01512 ATPase-IB2_Cd heavy 100.0 8.8E-78 1.9E-82 667.1 54.3 508 77-674 4-514 (536)
29 PRK10671 copA copper exporting 100.0 1.5E-76 3.2E-81 690.3 62.2 507 97-666 285-793 (834)
30 KOG0209 P-type ATPase [Inorgan 100.0 4.3E-77 9.4E-82 630.2 29.4 574 22-614 148-835 (1160)
31 KOG0206 P-type ATPase [General 100.0 2.1E-75 4.5E-80 662.5 32.4 618 46-674 28-883 (1151)
32 KOG0210 P-type ATPase [Inorgan 100.0 3.5E-74 7.6E-79 597.7 32.6 595 45-660 74-856 (1051)
33 COG2216 KdpB High-affinity K+ 100.0 5.1E-64 1.1E-68 508.8 33.0 521 69-643 29-567 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 2.4E-36 5.2E-41 301.7 24.6 220 104-324 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 1.1E-25 2.4E-30 222.4 13.6 211 328-605 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 1.7E-15 3.8E-20 127.9 11.3 124 483-637 20-146 (152)
37 PF00690 Cation_ATPase_N: Cati 99.4 1E-12 2.2E-17 103.8 6.9 67 19-85 1-69 (69)
38 PRK11133 serB phosphoserine ph 99.1 6.2E-10 1.3E-14 115.3 11.6 131 493-638 181-316 (322)
39 PRK01158 phosphoglycolate phos 99.1 1.2E-09 2.5E-14 109.1 11.7 153 486-638 12-226 (230)
40 TIGR02137 HSK-PSP phosphoserin 99.0 1.7E-09 3.8E-14 104.8 12.3 131 493-640 68-198 (203)
41 smart00831 Cation_ATPase_N Cat 99.0 6.7E-10 1.5E-14 86.4 7.1 59 30-88 2-62 (64)
42 COG0561 Cof Predicted hydrolas 99.0 2.7E-09 5.8E-14 108.9 13.4 154 486-639 12-259 (264)
43 PRK10513 sugar phosphate phosp 99.0 2.1E-09 4.5E-14 110.1 12.3 66 573-638 196-265 (270)
44 TIGR01487 SPP-like sucrose-pho 99.0 1.2E-09 2.7E-14 107.6 10.2 144 493-636 18-214 (215)
45 PRK15126 thiamin pyrimidine py 99.0 1.2E-09 2.6E-14 111.9 10.0 146 493-638 19-259 (272)
46 PRK10976 putative hydrolase; P 99.0 2.3E-09 5E-14 109.5 10.9 66 573-638 190-261 (266)
47 TIGR02726 phenyl_P_delta pheny 98.9 4.6E-09 1E-13 98.2 10.4 104 500-633 41-146 (169)
48 TIGR01482 SPP-subfamily Sucros 98.9 5.8E-09 1.3E-13 103.6 11.0 146 493-638 15-222 (225)
49 TIGR01670 YrbI-phosphatas 3-de 98.9 7.7E-09 1.7E-13 96.0 10.3 107 501-637 36-145 (154)
50 TIGR00338 serB phosphoserine p 98.9 1.1E-08 2.4E-13 101.2 10.8 129 493-636 85-218 (219)
51 PF08282 Hydrolase_3: haloacid 98.9 6.2E-09 1.3E-13 105.0 8.8 147 491-637 13-254 (254)
52 PRK10530 pyridoxal phosphate ( 98.8 1.6E-08 3.6E-13 103.5 10.6 66 573-638 199-268 (272)
53 PLN02887 hydrolase family prot 98.8 1.4E-08 3.1E-13 112.6 10.5 66 573-638 507-576 (580)
54 COG0560 SerB Phosphoserine pho 98.8 2.8E-08 6.1E-13 96.8 10.3 119 492-625 76-199 (212)
55 PF13246 Hydrolase_like2: Puta 98.8 2.1E-08 4.6E-13 83.7 6.9 64 375-439 20-89 (91)
56 COG1778 Low specificity phosph 98.7 4.5E-08 9.7E-13 86.6 8.4 116 500-647 42-165 (170)
57 PRK09484 3-deoxy-D-manno-octul 98.7 7.2E-08 1.6E-12 92.2 9.5 111 500-642 55-173 (183)
58 KOG4383 Uncharacterized conser 98.7 2.9E-05 6.2E-10 83.5 29.3 186 482-667 815-1106(1354)
59 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 2E-07 4.2E-12 94.6 12.9 66 573-638 176-253 (256)
60 TIGR00099 Cof-subfamily Cof su 98.7 6.6E-08 1.4E-12 98.1 8.7 64 573-636 188-255 (256)
61 PRK13582 thrH phosphoserine ph 98.6 2.4E-07 5.3E-12 90.5 11.7 125 493-637 68-195 (205)
62 PRK03669 mannosyl-3-phosphogly 98.6 4.2E-07 9.1E-12 93.0 13.1 66 573-638 187-265 (271)
63 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.5 5.9E-07 1.3E-11 87.4 9.7 117 493-622 80-200 (201)
64 PRK00192 mannosyl-3-phosphogly 98.5 1.7E-06 3.6E-11 88.6 13.1 66 573-638 190-267 (273)
65 TIGR03333 salvage_mtnX 2-hydro 98.4 1.3E-06 2.9E-11 85.9 11.2 136 492-638 69-209 (214)
66 KOG1615 Phosphoserine phosphat 98.4 3.4E-07 7.3E-12 83.9 5.6 102 493-611 88-199 (227)
67 PLN02954 phosphoserine phospha 98.3 4.9E-06 1.1E-10 82.5 12.4 126 493-636 84-222 (224)
68 PF12710 HAD: haloacid dehalog 98.3 9.7E-07 2.1E-11 85.2 5.7 92 496-602 92-192 (192)
69 COG0546 Gph Predicted phosphat 98.2 9.7E-06 2.1E-10 80.1 11.6 127 491-638 87-218 (220)
70 PRK09552 mtnX 2-hydroxy-3-keto 98.2 7.2E-06 1.6E-10 81.0 10.1 132 493-637 74-212 (219)
71 PRK13222 phosphoglycolate phos 98.2 1.6E-05 3.5E-10 78.8 11.8 127 492-640 92-224 (226)
72 TIGR01489 DKMTPPase-SF 2,3-dik 98.1 1.1E-05 2.3E-10 77.5 8.6 114 492-609 71-186 (188)
73 TIGR01488 HAD-SF-IB Haloacid D 98.1 7.2E-06 1.6E-10 78.0 7.3 100 494-604 74-177 (177)
74 TIGR01454 AHBA_synth_RP 3-amin 98.1 2.6E-05 5.6E-10 76.2 10.7 124 493-637 75-203 (205)
75 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 1.8E-05 3.9E-10 77.0 8.8 109 491-612 85-198 (202)
76 TIGR01485 SPP_plant-cyano sucr 98.0 1.7E-05 3.7E-10 80.0 8.9 148 491-638 19-244 (249)
77 cd01427 HAD_like Haloacid deha 97.9 4.3E-05 9.2E-10 68.7 7.9 118 489-609 20-138 (139)
78 PRK13288 pyrophosphatase PpaX; 97.9 7.6E-05 1.6E-09 73.4 9.9 124 493-637 82-210 (214)
79 TIGR02461 osmo_MPG_phos mannos 97.9 8E-05 1.7E-09 73.7 10.0 43 491-533 13-55 (225)
80 TIGR02471 sucr_syn_bact_C sucr 97.8 2.9E-05 6.3E-10 77.7 5.8 67 572-638 158-232 (236)
81 TIGR01449 PGP_bact 2-phosphogl 97.8 0.00011 2.5E-09 72.0 9.7 122 493-635 85-211 (213)
82 PRK13223 phosphoglycolate phos 97.8 0.00014 3E-09 74.3 10.6 126 492-638 100-230 (272)
83 PRK08238 hypothetical protein; 97.8 0.00013 2.9E-09 79.8 10.7 101 493-618 72-172 (479)
84 TIGR02463 MPGP_rel mannosyl-3- 97.7 0.00031 6.6E-09 69.5 11.4 39 495-533 18-56 (221)
85 PRK10187 trehalose-6-phosphate 97.7 0.0004 8.7E-09 70.6 11.7 140 493-638 36-241 (266)
86 PRK10826 2-deoxyglucose-6-phos 97.6 0.00025 5.4E-09 70.2 9.2 122 492-634 91-216 (222)
87 TIGR01422 phosphonatase phosph 97.6 0.00049 1.1E-08 69.6 11.3 97 493-607 99-196 (253)
88 PRK13225 phosphoglycolate phos 97.6 0.00081 1.8E-08 68.5 12.7 121 493-637 142-267 (273)
89 TIGR03351 PhnX-like phosphonat 97.6 0.0005 1.1E-08 67.9 10.9 124 492-636 86-218 (220)
90 PRK13226 phosphoglycolate phos 97.6 0.00044 9.5E-09 68.8 10.4 125 493-638 95-225 (229)
91 PRK13478 phosphonoacetaldehyde 97.5 0.00086 1.9E-08 68.4 12.2 125 493-637 101-254 (267)
92 COG4030 Uncharacterized protei 97.5 0.00096 2.1E-08 63.0 10.9 144 493-639 83-263 (315)
93 PRK12702 mannosyl-3-phosphogly 97.4 0.00081 1.7E-08 67.6 10.0 43 492-534 17-59 (302)
94 PRK06769 hypothetical protein; 97.4 0.00078 1.7E-08 63.7 9.3 123 494-636 29-170 (173)
95 PLN03243 haloacid dehalogenase 97.4 0.0013 2.8E-08 66.6 10.7 121 493-634 109-231 (260)
96 PLN02770 haloacid dehalogenase 97.3 0.0016 3.4E-08 65.6 10.5 116 493-627 108-227 (248)
97 PRK11590 hypothetical protein; 97.3 0.0022 4.8E-08 62.8 11.2 108 493-613 95-204 (211)
98 PLN02382 probable sucrose-phos 97.2 0.00052 1.1E-08 74.1 6.1 66 573-638 175-257 (413)
99 TIGR01548 HAD-SF-IA-hyp1 haloa 97.2 0.00062 1.3E-08 66.0 6.1 94 491-604 104-197 (197)
100 TIGR01544 HAD-SF-IE haloacid d 97.2 0.0041 9E-08 62.6 11.8 137 492-637 120-273 (277)
101 TIGR01545 YfhB_g-proteo haloac 97.2 0.0016 3.5E-08 63.6 8.6 107 493-612 94-202 (210)
102 PRK14502 bifunctional mannosyl 97.2 0.0025 5.5E-08 71.3 11.0 48 486-533 425-473 (694)
103 PRK11587 putative phosphatase; 97.1 0.0022 4.8E-08 63.2 9.2 114 493-626 83-198 (218)
104 PRK06698 bifunctional 5'-methy 97.1 0.002 4.4E-08 71.1 9.7 124 493-640 330-456 (459)
105 TIGR02253 CTE7 HAD superfamily 97.1 0.0021 4.5E-08 63.4 8.9 100 493-611 94-195 (221)
106 PLN02779 haloacid dehalogenase 97.0 0.0029 6.2E-08 65.1 9.1 122 493-633 144-268 (286)
107 PRK08942 D,D-heptose 1,7-bisph 97.0 0.006 1.3E-07 58.2 10.7 128 493-638 29-177 (181)
108 TIGR01484 HAD-SF-IIB HAD-super 97.0 0.0027 5.8E-08 61.9 8.4 39 493-531 17-55 (204)
109 PLN02575 haloacid dehalogenase 96.9 0.0052 1.1E-07 64.9 10.3 121 493-634 216-338 (381)
110 PF05116 S6PP: Sucrose-6F-phos 96.9 0.0019 4.1E-08 64.9 6.5 68 571-638 163-243 (247)
111 PRK14501 putative bifunctional 96.9 0.011 2.4E-07 69.1 13.8 170 449-638 481-721 (726)
112 TIGR01662 HAD-SF-IIIA HAD-supe 96.8 0.006 1.3E-07 54.8 8.9 93 492-607 24-126 (132)
113 TIGR01428 HAD_type_II 2-haloal 96.8 0.0041 8.9E-08 60.2 8.1 97 493-608 92-188 (198)
114 PHA02530 pseT polynucleotide k 96.8 0.0044 9.5E-08 64.4 8.8 108 490-608 184-292 (300)
115 TIGR02254 YjjG/YfnB HAD superf 96.8 0.0049 1.1E-07 60.8 8.6 122 493-636 97-223 (224)
116 PRK14988 GMP/IMP nucleotidase; 96.8 0.0036 7.7E-08 62.0 7.5 96 493-607 93-188 (224)
117 TIGR01672 AphA HAD superfamily 96.8 0.0026 5.7E-08 63.0 6.3 91 494-610 115-210 (237)
118 COG4359 Uncharacterized conser 96.7 0.0028 6.1E-08 58.1 5.7 110 493-610 73-184 (220)
119 PRK11009 aphA acid phosphatase 96.6 0.0058 1.3E-07 60.5 7.4 90 493-610 114-210 (237)
120 PF13419 HAD_2: Haloacid dehal 96.6 0.0025 5.4E-08 59.8 4.7 96 493-607 77-172 (176)
121 TIGR00213 GmhB_yaeD D,D-heptos 96.5 0.015 3.3E-07 55.1 9.6 126 494-633 27-174 (176)
122 TIGR01990 bPGM beta-phosphoglu 96.5 0.0044 9.6E-08 59.1 5.8 94 493-607 87-180 (185)
123 TIGR01668 YqeG_hyp_ppase HAD s 96.5 0.02 4.4E-07 53.9 9.9 110 455-607 20-131 (170)
124 TIGR01509 HAD-SF-IA-v3 haloaci 96.4 0.011 2.3E-07 56.2 8.0 94 493-606 85-178 (183)
125 smart00775 LNS2 LNS2 domain. T 96.4 0.023 4.9E-07 52.7 9.6 104 491-607 25-141 (157)
126 PRK09449 dUMP phosphatase; Pro 96.4 0.015 3.3E-07 57.5 9.1 123 493-637 95-222 (224)
127 PLN02940 riboflavin kinase 96.4 0.011 2.3E-07 63.5 8.3 119 493-632 93-215 (382)
128 TIGR02009 PGMB-YQAB-SF beta-ph 96.4 0.0065 1.4E-07 58.0 6.0 94 493-607 88-181 (185)
129 TIGR01685 MDP-1 magnesium-depe 96.3 0.014 3E-07 54.9 7.7 110 485-610 37-155 (174)
130 TIGR01656 Histidinol-ppas hist 96.3 0.011 2.4E-07 54.2 6.8 100 493-608 27-141 (147)
131 PTZ00174 phosphomannomutase; P 96.1 0.0038 8.3E-08 62.8 2.8 53 572-624 187-244 (247)
132 TIGR01549 HAD-SF-IA-v1 haloaci 96.0 0.0094 2E-07 55.0 5.1 90 494-605 65-154 (154)
133 TIGR02252 DREG-2 REG-2-like, H 95.9 0.021 4.6E-07 55.4 7.1 95 493-607 105-200 (203)
134 TIGR01261 hisB_Nterm histidino 95.7 0.021 4.5E-07 53.2 6.0 100 493-609 29-144 (161)
135 PLN02811 hydrolase 95.7 0.023 5.1E-07 56.0 6.7 98 493-608 78-180 (220)
136 TIGR01691 enolase-ppase 2,3-di 95.6 0.027 5.9E-07 55.3 6.7 100 490-610 92-194 (220)
137 COG2179 Predicted hydrolase of 95.6 0.091 2E-06 47.9 9.2 111 451-606 19-132 (175)
138 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.0 0.38 8.2E-06 48.1 12.6 94 486-605 17-115 (242)
139 TIGR01533 lipo_e_P4 5'-nucleot 94.9 0.13 2.9E-06 51.8 9.0 86 492-602 117-205 (266)
140 TIGR01458 HAD-SF-IIA-hyp3 HAD- 94.9 0.38 8.2E-06 48.6 12.4 48 486-533 10-64 (257)
141 TIGR01681 HAD-SF-IIIC HAD-supe 94.8 0.13 2.8E-06 45.9 7.8 86 493-603 29-126 (128)
142 smart00577 CPDc catalytic doma 94.8 0.029 6.3E-07 51.5 3.7 95 491-610 43-140 (148)
143 TIGR01664 DNA-3'-Pase DNA 3'-p 94.6 0.1 2.2E-06 48.9 6.9 93 495-608 44-158 (166)
144 PRK05446 imidazole glycerol-ph 94.5 0.093 2E-06 55.2 7.1 100 492-608 29-144 (354)
145 PF06888 Put_Phosphatase: Puta 94.5 0.097 2.1E-06 51.6 6.7 101 493-601 71-185 (234)
146 TIGR02247 HAD-1A3-hyp Epoxide 94.4 0.045 9.8E-07 53.5 4.4 97 492-607 93-191 (211)
147 TIGR00685 T6PP trehalose-phosp 94.4 0.05 1.1E-06 54.6 4.8 68 567-638 161-240 (244)
148 PLN02919 haloacid dehalogenase 94.0 0.24 5.2E-06 60.2 10.3 119 494-632 162-284 (1057)
149 TIGR01675 plant-AP plant acid 94.0 0.28 6E-06 48.2 8.7 81 492-599 119-210 (229)
150 PLN03017 trehalose-phosphatase 93.7 1.2 2.7E-05 46.8 13.3 61 573-637 283-355 (366)
151 PRK10563 6-phosphogluconate ph 93.7 0.11 2.3E-06 51.2 5.4 97 493-610 88-184 (221)
152 PLN02205 alpha,alpha-trehalose 93.5 0.68 1.5E-05 54.8 12.4 66 451-529 587-653 (854)
153 TIGR01686 FkbH FkbH-like domai 93.3 0.32 6.9E-06 51.0 8.4 92 493-610 31-128 (320)
154 PRK09456 ?-D-glucose-1-phospha 93.2 0.16 3.5E-06 49.1 5.7 97 493-608 84-181 (199)
155 TIGR01993 Pyr-5-nucltdase pyri 93.1 0.14 3.1E-06 48.7 5.2 98 493-608 84-181 (184)
156 COG3769 Predicted hydrolase (H 92.9 0.85 1.8E-05 43.6 9.6 37 497-533 27-63 (274)
157 PLN02580 trehalose-phosphatase 92.5 0.22 4.9E-06 52.7 5.9 63 572-638 300-374 (384)
158 PF09419 PGP_phosphatase: Mito 92.3 0.48 1E-05 44.1 7.1 107 455-605 36-157 (168)
159 KOG3120 Predicted haloacid deh 91.6 0.84 1.8E-05 43.7 7.9 111 493-610 84-208 (256)
160 PRK10725 fructose-1-P/6-phosph 91.4 0.42 9.1E-06 45.5 6.0 92 495-607 90-181 (188)
161 PLN02645 phosphoglycolate phos 90.9 0.76 1.6E-05 47.9 7.8 49 485-533 36-87 (311)
162 PHA02597 30.2 hypothetical pro 90.8 0.49 1.1E-05 45.6 5.9 92 493-608 74-170 (197)
163 PRK10748 flavin mononucleotide 89.7 1 2.2E-05 45.0 7.2 93 493-610 113-206 (238)
164 KOG3040 Predicted sugar phosph 89.3 1.6 3.6E-05 41.3 7.6 50 483-532 13-65 (262)
165 PF08235 LNS2: LNS2 (Lipin/Ned 88.3 3.7 7.9E-05 37.8 9.1 103 492-607 26-141 (157)
166 PF13344 Hydrolase_6: Haloacid 87.6 0.38 8.3E-06 40.8 2.2 48 486-533 7-57 (101)
167 COG1011 Predicted hydrolase (H 87.6 3.3 7.1E-05 40.7 9.3 123 493-637 99-226 (229)
168 COG0637 Predicted phosphatase/ 87.1 1.6 3.4E-05 43.0 6.5 98 492-608 85-182 (221)
169 PLN02423 phosphomannomutase 83.8 1.4 3E-05 44.2 4.4 43 572-615 188-235 (245)
170 PF03767 Acid_phosphat_B: HAD 83.7 1.7 3.7E-05 43.0 4.9 80 494-600 116-207 (229)
171 TIGR01493 HAD-SF-IA-v2 Haloaci 82.3 2 4.3E-05 40.3 4.7 85 493-604 90-175 (175)
172 TIGR01684 viral_ppase viral ph 81.3 2.7 5.8E-05 42.7 5.3 41 494-534 146-187 (301)
173 TIGR01680 Veg_Stor_Prot vegeta 80.8 8.6 0.00019 38.7 8.6 30 492-521 144-173 (275)
174 COG0241 HisB Histidinol phosph 80.6 7.6 0.00016 36.7 7.7 98 494-610 32-146 (181)
175 COG0474 MgtA Cation transport 80.1 48 0.001 40.1 16.3 271 18-306 41-330 (917)
176 PRK10444 UMP phosphatase; Prov 79.3 2.1 4.5E-05 43.0 3.8 48 485-532 9-59 (248)
177 TIGR01517 ATPase-IIB_Ca plasma 79.2 66 0.0014 39.1 17.2 201 99-306 133-358 (941)
178 TIGR02251 HIF-SF_euk Dullard-l 79.2 0.95 2.1E-05 42.1 1.3 41 492-533 41-81 (162)
179 COG3700 AphA Acid phosphatase 79.1 3.5 7.7E-05 38.0 4.8 90 494-610 115-210 (237)
180 PLN02177 glycerol-3-phosphate 79.1 7.2 0.00016 43.3 8.3 97 494-612 111-215 (497)
181 PHA03398 viral phosphatase sup 78.9 3.6 7.9E-05 41.8 5.4 41 494-534 148-189 (303)
182 TIGR01452 PGP_euk phosphoglyco 78.6 8.8 0.00019 39.2 8.4 48 486-533 11-61 (279)
183 PF13242 Hydrolase_like: HAD-h 77.9 1.9 4.2E-05 34.1 2.6 55 571-625 7-69 (75)
184 TIGR01457 HAD-SF-IIA-hyp2 HAD- 75.4 5.1 0.00011 40.2 5.4 49 486-534 10-61 (249)
185 TIGR01647 ATPase-IIIA_H plasma 75.4 53 0.0012 38.8 14.6 193 105-306 65-268 (755)
186 TIGR01663 PNK-3'Pase polynucle 74.5 7.5 0.00016 43.4 6.8 40 494-533 198-249 (526)
187 PTZ00445 p36-lilke protein; Pr 74.3 15 0.00032 35.5 7.8 62 445-519 28-102 (219)
188 TIGR01657 P-ATPase-V P-type AT 71.6 2.6E+02 0.0056 34.6 19.7 34 155-188 236-272 (1054)
189 PTZ00174 phosphomannomutase; P 69.9 6.8 0.00015 39.2 4.8 42 486-527 14-56 (247)
190 TIGR01689 EcbF-BcbF capsule bi 69.8 5.4 0.00012 35.3 3.6 32 492-523 23-54 (126)
191 PF05822 UMPH-1: Pyrimidine 5' 67.9 12 0.00026 37.1 5.9 133 492-636 89-240 (246)
192 KOG3085 Predicted hydrolase (H 65.3 20 0.00044 35.4 6.9 103 495-619 115-221 (237)
193 COG0647 NagD Predicted sugar p 64.2 8.4 0.00018 38.9 4.1 47 484-530 15-61 (269)
194 TIGR01524 ATPase-IIIB_Mg magne 63.5 3.3E+02 0.0072 32.8 18.5 198 102-305 96-317 (867)
195 TIGR02244 HAD-IG-Ncltidse HAD 60.7 37 0.00079 35.7 8.2 37 495-531 186-223 (343)
196 TIGR01522 ATPase-IIA2_Ca golgi 60.5 2.3E+02 0.005 34.3 16.0 193 110-306 95-306 (884)
197 PF00122 E1-E2_ATPase: E1-E2 A 58.3 61 0.0013 31.7 9.2 193 107-308 2-210 (230)
198 TIGR01459 HAD-SF-IIA-hyp4 HAD- 57.2 7.7 0.00017 38.7 2.5 92 495-608 140-237 (242)
199 PRK15122 magnesium-transportin 56.9 3.3E+02 0.0071 33.1 16.4 196 103-306 119-351 (903)
200 PLN02151 trehalose-phosphatase 56.6 23 0.0005 37.3 5.9 63 572-638 268-342 (354)
201 TIGR01456 CECR5 HAD-superfamil 56.1 64 0.0014 33.7 9.2 50 484-533 7-64 (321)
202 TIGR01494 ATPase_P-type ATPase 55.1 72 0.0016 35.6 10.0 148 141-306 53-212 (499)
203 PRK10517 magnesium-transportin 54.5 4.7E+02 0.01 31.7 18.5 160 141-304 184-351 (902)
204 TIGR00739 yajC preprotein tran 54.1 1E+02 0.0022 25.0 8.1 24 118-141 23-46 (84)
205 PRK14188 bifunctional 5,10-met 52.9 56 0.0012 33.6 7.9 45 490-534 10-64 (296)
206 PRK11507 ribosome-associated p 52.0 18 0.00039 28.2 3.1 26 138-163 38-63 (70)
207 TIGR01106 ATPase-IIC_X-K sodiu 51.9 4.8E+02 0.01 32.1 17.0 201 101-305 110-325 (997)
208 PRK14179 bifunctional 5,10-met 49.2 92 0.002 31.8 8.6 137 490-626 10-207 (284)
209 PF13275 S4_2: S4 domain; PDB: 48.9 9.9 0.00022 29.2 1.3 28 138-166 34-61 (65)
210 PRK05585 yajC preprotein trans 48.9 1.6E+02 0.0034 25.2 8.7 44 98-141 18-61 (106)
211 CHL00200 trpA tryptophan synth 48.7 1E+02 0.0022 31.2 8.8 31 571-601 187-217 (263)
212 COG0279 GmhA Phosphoheptose is 48.6 53 0.0011 30.4 6.0 57 441-521 92-148 (176)
213 PF12689 Acid_PPase: Acid Phos 48.4 32 0.0007 32.1 4.9 41 493-533 45-86 (169)
214 PRK14174 bifunctional 5,10-met 47.7 79 0.0017 32.5 8.0 138 490-627 9-213 (295)
215 PRK14191 bifunctional 5,10-met 47.7 75 0.0016 32.4 7.8 138 490-627 9-207 (285)
216 TIGR01452 PGP_euk phosphoglyco 46.3 21 0.00046 36.4 3.7 42 567-608 201-243 (279)
217 PF13380 CoA_binding_2: CoA bi 45.7 26 0.00057 30.4 3.7 78 450-533 18-104 (116)
218 PF03120 DNA_ligase_OB: NAD-de 45.5 12 0.00025 30.3 1.3 22 148-169 45-67 (82)
219 PF01455 HupF_HypC: HupF/HypC 44.7 56 0.0012 25.4 4.9 32 134-165 16-50 (68)
220 PF06506 PrpR_N: Propionate ca 44.6 1.9E+02 0.0041 27.0 9.7 107 497-649 65-172 (176)
221 TIGR02250 FCP1_euk FCP1-like p 43.8 39 0.00085 31.1 4.7 42 491-533 56-97 (156)
222 PF11694 DUF3290: Protein of u 42.0 1.2E+02 0.0025 27.8 7.3 21 144-164 97-117 (149)
223 PF00389 2-Hacid_dh: D-isomer 41.9 2.4E+02 0.0052 24.7 10.2 36 575-611 52-89 (133)
224 PLN02645 phosphoglycolate phos 41.7 60 0.0013 33.7 6.3 68 568-637 230-307 (311)
225 PRK14184 bifunctional 5,10-met 41.7 1.2E+02 0.0027 30.9 8.2 45 490-534 9-63 (286)
226 cd02071 MM_CoA_mut_B12_BD meth 41.3 43 0.00094 29.3 4.4 80 453-533 21-104 (122)
227 PF12368 DUF3650: Protein of u 41.3 22 0.00047 22.2 1.7 15 35-49 13-27 (28)
228 PF15584 Imm44: Immunity prote 41.2 12 0.00026 30.6 0.7 19 155-173 13-31 (94)
229 PRK14194 bifunctional 5,10-met 41.0 4.3E+02 0.0092 27.3 13.7 71 556-626 128-208 (301)
230 PF12710 HAD: haloacid dehalog 39.6 16 0.00034 34.5 1.5 14 331-344 1-14 (192)
231 PF02358 Trehalose_PPase: Treh 38.7 38 0.00083 33.5 4.1 62 567-628 159-234 (235)
232 COG1188 Ribosome-associated he 38.5 36 0.00078 28.5 3.1 35 138-174 35-69 (100)
233 COG1877 OtsB Trehalose-6-phosp 38.4 1.6E+02 0.0034 29.9 8.3 46 486-531 33-79 (266)
234 PF14336 DUF4392: Domain of un 38.2 66 0.0014 33.1 5.8 37 496-532 63-100 (291)
235 PRK15424 propionate catabolism 36.6 4.7E+02 0.01 29.5 12.6 70 497-596 95-165 (538)
236 TIGR01501 MthylAspMutase methy 35.7 85 0.0018 28.1 5.3 80 454-533 24-112 (134)
237 COG2503 Predicted secreted aci 35.6 1.6E+02 0.0035 29.1 7.5 83 494-603 123-211 (274)
238 PRK01122 potassium-transportin 34.8 7.4E+02 0.016 28.9 14.1 85 442-532 444-530 (679)
239 PLN02591 tryptophan synthase 34.7 2E+02 0.0043 28.9 8.4 33 571-603 174-209 (250)
240 COG0078 ArgF Ornithine carbamo 34.7 3.5E+02 0.0076 27.8 10.0 34 496-533 90-123 (310)
241 PRK14170 bifunctional 5,10-met 34.4 92 0.002 31.8 6.0 45 490-534 10-63 (284)
242 TIGR01460 HAD-SF-IIA Haloacid 34.2 48 0.001 32.8 4.0 47 486-532 7-57 (236)
243 COG0272 Lig NAD-dependent DNA 34.0 69 0.0015 36.5 5.4 70 148-227 363-434 (667)
244 PRK14169 bifunctional 5,10-met 33.5 1E+02 0.0022 31.4 6.2 137 490-626 9-205 (282)
245 PRK14175 bifunctional 5,10-met 33.2 97 0.0021 31.7 6.0 138 490-627 11-208 (286)
246 PRK14167 bifunctional 5,10-met 32.5 1.1E+02 0.0023 31.6 6.1 137 490-626 10-210 (297)
247 cd02067 B12-binding B12 bindin 32.1 60 0.0013 28.0 3.8 80 453-533 21-104 (119)
248 cd00860 ThrRS_anticodon ThrRS 31.8 1E+02 0.0022 24.8 5.0 47 487-533 6-53 (91)
249 TIGR02329 propionate_PrpR prop 31.4 6.3E+02 0.014 28.5 12.5 102 497-645 85-187 (526)
250 cd05014 SIS_Kpsf KpsF-like pro 29.7 3.6E+02 0.0079 23.2 9.1 28 494-521 59-86 (128)
251 TIGR02471 sucr_syn_bact_C sucr 29.3 42 0.00091 33.1 2.7 35 498-533 20-54 (236)
252 cd05017 SIS_PGI_PMI_1 The memb 29.3 93 0.002 26.9 4.5 37 494-532 55-91 (119)
253 PF02699 YajC: Preprotein tran 28.7 72 0.0016 25.8 3.4 13 152-164 36-48 (82)
254 PRK14178 bifunctional 5,10-met 28.6 2.8E+02 0.0061 28.2 8.4 64 564-627 129-202 (279)
255 PF11019 DUF2608: Protein of u 28.6 2.3E+02 0.0049 28.4 7.7 106 494-603 82-196 (252)
256 PRK14190 bifunctional 5,10-met 28.4 1.2E+02 0.0027 30.9 5.7 45 490-534 11-64 (284)
257 PRK10444 UMP phosphatase; Prov 28.4 1.6E+02 0.0035 29.4 6.7 65 567-633 173-245 (248)
258 PRK10671 copA copper exporting 28.4 8.3E+02 0.018 29.3 13.8 34 156-189 331-365 (834)
259 cd06167 LabA_like LabA_like pr 27.4 2.1E+02 0.0045 25.6 6.8 28 575-602 113-140 (149)
260 PF05568 ASFV_J13L: African sw 26.7 1.6E+02 0.0034 26.3 5.3 16 48-63 12-27 (189)
261 KOG2914 Predicted haloacid-hal 26.6 1.7E+02 0.0037 28.7 6.2 100 494-610 93-194 (222)
262 PRK04980 hypothetical protein; 26.6 80 0.0017 26.7 3.4 58 134-196 18-82 (102)
263 COG5547 Small integral membran 26.6 2.7E+02 0.0059 20.7 6.0 48 66-121 3-52 (62)
264 KOG2882 p-Nitrophenyl phosphat 26.5 1E+02 0.0023 31.4 4.7 48 486-533 31-81 (306)
265 TIGR01116 ATPase-IIA1_Ca sarco 26.4 1.2E+03 0.026 28.3 14.7 162 142-306 93-271 (917)
266 TIGR00640 acid_CoA_mut_C methy 26.2 92 0.002 27.8 4.0 97 455-580 26-125 (132)
267 PRK02261 methylaspartate mutas 26.0 96 0.0021 27.8 4.1 81 453-533 25-114 (137)
268 PRK14182 bifunctional 5,10-met 25.5 1.7E+02 0.0038 29.8 6.2 45 490-534 9-62 (282)
269 COG2501 S4-like RNA binding pr 25.3 83 0.0018 24.8 3.0 26 138-163 38-63 (73)
270 PRK14172 bifunctional 5,10-met 25.0 1.7E+02 0.0036 29.9 6.0 138 490-627 10-208 (278)
271 PRK15108 biotin synthase; Prov 25.0 8.3E+02 0.018 25.7 11.8 86 496-597 111-199 (345)
272 PRK14166 bifunctional 5,10-met 25.0 1.8E+02 0.004 29.6 6.3 137 490-626 9-206 (282)
273 PLN02423 phosphomannomutase 24.9 1E+02 0.0022 30.7 4.5 30 493-523 24-53 (245)
274 PF04273 DUF442: Putative phos 24.6 1.2E+02 0.0027 26.0 4.3 78 498-601 16-102 (110)
275 smart00306 HintN Hint (Hedgeho 24.5 88 0.0019 25.7 3.4 27 136-162 73-99 (100)
276 COG4229 Predicted enolase-phos 24.1 2.1E+02 0.0046 27.0 5.8 93 490-606 100-198 (229)
277 PF05240 APOBEC_C: APOBEC-like 23.9 82 0.0018 23.3 2.6 25 496-520 2-26 (55)
278 cd04728 ThiG Thiazole synthase 23.9 5.7E+02 0.012 25.5 9.1 52 478-529 89-143 (248)
279 PF03129 HGTP_anticodon: Antic 23.7 1.3E+02 0.0028 24.5 4.3 48 486-533 3-54 (94)
280 PRK14186 bifunctional 5,10-met 23.7 1.6E+02 0.0035 30.3 5.6 45 490-534 10-64 (297)
281 TIGR01457 HAD-SF-IIA-hyp2 HAD- 23.0 4.2E+02 0.009 26.3 8.5 41 568-608 178-219 (249)
282 PF07287 DUF1446: Protein of u 22.9 1.6E+02 0.0035 31.2 5.6 41 493-533 55-100 (362)
283 PRK05886 yajC preprotein trans 22.8 2E+02 0.0044 24.7 5.1 22 120-141 26-47 (109)
284 TIGR00262 trpA tryptophan synt 22.8 4.2E+02 0.0092 26.6 8.5 39 492-530 123-163 (256)
285 PF09926 DUF2158: Uncharacteri 22.8 56 0.0012 24.0 1.5 13 154-166 2-14 (53)
286 PRK13938 phosphoheptose isomer 22.8 1.6E+02 0.0034 28.3 5.2 55 442-520 97-151 (196)
287 TIGR00739 yajC preprotein tran 22.8 1.6E+02 0.0036 23.9 4.4 14 151-164 36-49 (84)
288 cd02072 Glm_B12_BD B12 binding 22.7 91 0.002 27.7 3.2 80 454-533 22-110 (128)
289 cd05013 SIS_RpiR RpiR-like pro 22.7 3.9E+02 0.0084 23.0 7.6 26 496-521 74-99 (139)
290 cd02070 corrinoid_protein_B12- 22.7 56 0.0012 31.4 2.1 79 453-533 104-186 (201)
291 PF08645 PNK3P: Polynucleotide 22.4 71 0.0015 29.5 2.6 24 495-518 31-54 (159)
292 PRK00208 thiG thiazole synthas 22.4 6.4E+02 0.014 25.2 9.2 53 477-529 88-143 (250)
293 PRK11033 zntA zinc/cadmium/mer 22.2 6.1E+02 0.013 30.0 10.8 157 140-307 261-419 (741)
294 PRK14185 bifunctional 5,10-met 21.9 2.1E+02 0.0046 29.3 6.1 45 490-534 9-63 (293)
295 PRK13670 hypothetical protein; 21.9 4.7E+02 0.01 28.1 9.0 97 483-603 2-112 (388)
296 PRK10886 DnaA initiator-associ 21.7 3.6E+02 0.0079 25.8 7.4 57 441-521 92-148 (196)
297 PRK13111 trpA tryptophan synth 21.4 8.4E+02 0.018 24.5 12.6 28 572-599 186-213 (258)
298 cd05008 SIS_GlmS_GlmD_1 SIS (S 21.1 92 0.002 27.0 3.0 26 495-520 59-84 (126)
299 PRK05886 yajC preprotein trans 21.1 5.4E+02 0.012 22.1 8.7 14 151-164 37-50 (109)
300 COG2179 Predicted hydrolase of 20.8 1.7E+02 0.0037 27.2 4.5 82 446-533 49-133 (175)
301 cd00859 HisRS_anticodon HisRS 20.8 1.8E+02 0.0039 22.9 4.5 47 487-533 6-53 (91)
302 TIGR02370 pyl_corrinoid methyl 20.7 57 0.0012 31.3 1.7 78 453-533 106-188 (197)
303 TIGR02988 YaaA_near_RecF S4 do 20.6 91 0.002 23.1 2.4 23 139-161 36-58 (59)
304 COG1862 YajC Preprotein transl 20.5 2.2E+02 0.0047 24.0 4.7 48 100-164 8-55 (97)
305 COG1778 Low specificity phosph 20.4 70 0.0015 29.3 2.0 27 322-348 2-28 (170)
306 PF12017 Tnp_P_element: Transp 20.2 1.5E+02 0.0033 29.4 4.5 38 497-534 197-234 (236)
307 KOG3416 Predicted nucleic acid 20.1 66 0.0014 28.1 1.7 15 151-165 60-74 (134)
308 COG4996 Predicted phosphatase 20.1 1.8E+02 0.0039 25.8 4.3 42 493-534 41-82 (164)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8e-116 Score=933.05 Aligned_cols=645 Identities=32% Similarity=0.493 Sum_probs=552.1
Q ss_pred CccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC
Q 005830 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRD 95 (675)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 95 (675)
..|..+.+|++.+|.++ .+|||.+|+.+|+++||+|+++... .+.|+.+++||.+|+..++++++++||++.
T Consensus 3 ~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~------ 76 (972)
T KOG0202|consen 3 EAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA------ 76 (972)
T ss_pred chhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH------
Confidence 35778999999999999 8899999999999999999999876 778999999999999999999999999986
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEe
Q 005830 96 PDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (675)
Q Consensus 96 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~ 175 (675)
.|.+++.|.++++++..+.++||||+++++++|+++.|+.++|+|+|+.+.+++++|||||||.++-||+||||.++++
T Consensus 77 -~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 77 -DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 6778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeeEeeccccCCCcccccCC--------------CCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCc
Q 005830 176 GDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGH 240 (675)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~ 240 (675)
..++.||||+|||||.|+.|.. .|++|+||.+..|.+.++|+.||.+|.+|++.+.++..+ +++|
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 9889999999999999999953 267999999999999999999999999999999888775 6899
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH--HHhc-------cccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhh
Q 005830 241 FQKVLTAIGNFCICSIAVGIVAEIII--MYPV-------QHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 311 (675)
Q Consensus 241 ~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~ 311 (675)
+|+.++.++..+.-++.+.++..+++ .|+. +...+.+.+..++++.+++||++||..++++++.|.+||+|
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMak 315 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAK 315 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHh
Confidence 99999999988653333333332322 2321 11345567778899999999999999999999999999999
Q ss_pred cCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccC-----------C------------------CcH-
Q 005830 312 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG-----------V------------------EKE- 361 (675)
Q Consensus 312 ~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~-----------~------------------~~~- 361 (675)
+++++|...++|+||.+++||+|||||||+|+|.+.++++...... + ..+
T Consensus 316 knaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~ 395 (972)
T KOG0202|consen 316 KNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDL 395 (972)
T ss_pred hhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHH
Confidence 9999999999999999999999999999999999998775321100 0 111
Q ss_pred --HHHHHHHHHccc-----c------CcChHHHHHHhhcC-----ChH---H-----------HhcCCcEEEEecCCccC
Q 005830 362 --HVILLAARASRT-----E------NQDAIDAAIVGMLA-----DPK---E-----------ARAGVREVHFLPFNPVD 409 (675)
Q Consensus 362 --~~l~~~~~~~~~-----~------~~~~~~~ai~~~~~-----~~~---~-----------~~~~~~~~~~~~f~~~~ 409 (675)
+++..++.|... . .+.|.+.|+...+. +.. . ....++....+||++++
T Consensus 396 l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdr 475 (972)
T KOG0202|consen 396 LQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDR 475 (972)
T ss_pred HHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeeccccc
Confidence 223333322211 1 34677888765431 111 0 11223455889999999
Q ss_pred cceEEEEEcCCCc--EEEEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCc--
Q 005830 410 KRTALTYIDSDGN--WHRASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-- 473 (675)
Q Consensus 410 k~~sv~~~~~~g~--~~~~~kGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~-- 473 (675)
|+|++.+.+..++ +.+|.|||+|.|+++|+. ++..++.+.+...+|+++|+|++++|+++.+..
T Consensus 476 K~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~ 555 (972)
T KOG0202|consen 476 KSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVP 555 (972)
T ss_pred ceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccCh
Confidence 9999999876664 789999999999999952 345678899999999999999999999977641
Q ss_pred ---------CCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC-Ccc
Q 005830 474 ---------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS-SLL 543 (675)
Q Consensus 474 ---------~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~-~~~ 543 (675)
.+...|.+|+|+|++++.||+|++++++|+.|+++||+|+|+|||+..||.++|+++|+.....+.. ...
T Consensus 556 ~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~ 635 (972)
T KOG0202|consen 556 DDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMAL 635 (972)
T ss_pred hhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcccccccc
Confidence 2456789999999999999999999999999999999999999999999999999999976543221 223
Q ss_pred CCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHhccC
Q 005830 544 GQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASD 622 (675)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~ad 622 (675)
.+.+.+.++..+++....+..+|+|++|.+|.++|+.||++|++|+|+|||.||+||||.|||||||| +|+++||+|||
T Consensus 636 TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsD 715 (972)
T KOG0202|consen 636 TGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASD 715 (972)
T ss_pred chhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhh
Confidence 34455678888889999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred EEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Q 005830 623 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNIL 669 (675)
Q Consensus 623 ~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 669 (675)
+||.||||++|+.++++||.+|+|||+++.|.++.|+..+.+.++..
T Consensus 716 MVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~a 762 (972)
T KOG0202|consen 716 MVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTA 762 (972)
T ss_pred cEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999866665443
No 2
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=6.2e-114 Score=987.20 Aligned_cols=620 Identities=60% Similarity=0.946 Sum_probs=554.6
Q ss_pred CCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHH
Q 005830 37 GLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISF 116 (675)
Q Consensus 37 GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 116 (675)
|||++|+++|+++||+|+++.++++.|+.|+++|++|++|+++++++++++++ .|.++++++++++++..+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------NWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------chhhhhhhhhhhHHHHHHHH
Confidence 89999999999999999999877888999999999999999999999999875 78899999999999999999
Q ss_pred HHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccC
Q 005830 117 IEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKN 196 (675)
Q Consensus 117 ~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~ 196 (675)
++++++++.+++|++..+++++|+|||++++|++++|+|||+|.|++||+|||||+|++|+.+.||||+|||||.|+.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999966999999999999999999
Q ss_pred CCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch
Q 005830 197 PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKY 275 (675)
Q Consensus 197 ~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 275 (675)
+||.+|+||.+.+|++.++|++||.+|.+|++.+++++.+ +++++++.+++++.+++.++++.+++.++++++....+|
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999998775 567999999999988766555544444444444356788
Q ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecc
Q 005830 276 RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA 355 (675)
Q Consensus 276 ~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~ 355 (675)
..++..++++++++|||+||++++++++.++.+|+|+|+++|+++++|+||.+|++|||||||||+|+|++.+++.. .
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~--~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPF--F 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEec--C
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999987642 2
Q ss_pred cCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEEEEEcCC-CcEEEEEcCcHHHH
Q 005830 356 KGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQI 434 (675)
Q Consensus 356 ~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~-g~~~~~~kGa~e~i 434 (675)
.+.+.++++.+++.++....+||++.|+++++.+....+..++..+.+||++.+|+|++++.+.+ |+.++++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 22566778888776665556699999999987655444556788899999999999998887654 77888999999999
Q ss_pred HHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEE
Q 005830 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKM 514 (675)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~ 514 (675)
+++|+...+.++++.+.+++++.+|+|++++|+++ .|.+|+|+|+++|+||+||+++++|++||++||+++|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998766677888889999999999999999973 2678999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCC
Q 005830 515 ITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDG 594 (675)
Q Consensus 515 ~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg 594 (675)
+|||++.+|.++|+++||..+......+........++++++++.+++..+|||++|+||.++|+.+|++|++|+|+|||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDG 543 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDG 543 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 99999999999999999975433222233333334566778999999999999999999999999999999999999999
Q ss_pred ccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 595 ~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
.||+|||++|||||||++|+|+|+++||+|+++++|+.|++++++||++|+|++||+.|.++.|+..++.+++..++.|
T Consensus 544 vNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~ 622 (755)
T TIGR01647 544 VNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN 622 (755)
T ss_pred cccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999987766655444444
No 3
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=4.9e-113 Score=990.53 Aligned_cols=640 Identities=30% Similarity=0.462 Sum_probs=560.2
Q ss_pred ccccCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCc
Q 005830 19 LERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPD 97 (675)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 97 (675)
.+..+.+++++.|+++.+|||++|+++|+++||+|+++.+++ ++|..|+++|++|++++++++++++++++ .
T Consensus 49 ~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~-------~ 121 (902)
T PRK10517 49 AAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE-------D 121 (902)
T ss_pred HHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc-------c
Confidence 457899999999999988999999999999999999998875 57889999999999999999999999864 7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEEC------CeEEEEEcCCccCCcEEEecCCCeeeeeE
Q 005830 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDIVPADA 171 (675)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~L~~GDiv~l~~G~~iPaD~ 171 (675)
|.++++|+++++++.++++++++|+++++++|++..+++++|+|| |++++|++++|+|||+|.|++||+|||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg 201 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADL 201 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeE
Confidence 889999999999999999999999999999999999999999999 78999999999999999999999999999
Q ss_pred EEEecCCeeEeeccccCCCcccccCCCC-------------ccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc-CC
Q 005830 172 RLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 237 (675)
Q Consensus 172 ~vl~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~-~~ 237 (675)
+|++|+++.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++.+. .+
T Consensus 202 ~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~ 281 (902)
T PRK10517 202 RILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSE 281 (902)
T ss_pred EEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCC
Confidence 9999977899999999999999998874 799999999999999999999999999999998776 46
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccc
Q 005830 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (675)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk 317 (675)
++++++.+++++++++.+.++.+.+.+++.+ ....+|..++..++++++++|||+||++++++++.++.+|+++|+++|
T Consensus 282 ~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~-~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk 360 (902)
T PRK10517 282 PNAFQQGISRVSWLLIRFMLVMAPVVLLING-YTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVK 360 (902)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH-HhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEe
Confidence 7999999999988765444443333233322 234578889999999999999999999999999999999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccc--cCcChHHHHHHhhcCCh--HHH
Q 005830 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAAIVGMLADP--KEA 393 (675)
Q Consensus 318 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~~ 393 (675)
+++++|++|++|++|||||||||+|+|++.+... ..+.+.++++..++.++.. ..+||++.|++.++... ...
T Consensus 361 ~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~---~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~ 437 (902)
T PRK10517 361 RLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD---ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSL 437 (902)
T ss_pred cchhhhhccCCCEEEecCCCccccceEEEEEEec---CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhh
Confidence 9999999999999999999999999999987531 1233456677766654432 23599999998876432 223
Q ss_pred hcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEE
Q 005830 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSL 463 (675)
Q Consensus 394 ~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l 463 (675)
...++.++.+||++.+|+|++++.+.++.+.+++||+||.++++|+. +++.++.+.+..++++++|+|++
T Consensus 438 ~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 517 (902)
T PRK10517 438 ASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVV 517 (902)
T ss_pred hhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 44677889999999999999988776777889999999999999963 22345667778889999999999
Q ss_pred EEEeeccCCcCCC---CCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC
Q 005830 464 GVARQEIPEKTKE---SPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540 (675)
Q Consensus 464 ~~a~~~~~~~~~~---~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~ 540 (675)
++||++++..+.+ ..|++++|+|+++|+||+||+++++|++|+++||+++|+|||++.||.++|+++||.. ..
T Consensus 518 avA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~ 593 (902)
T PRK10517 518 AVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GE 593 (902)
T ss_pred EEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cC
Confidence 9999987653321 2378999999999999999999999999999999999999999999999999999952 22
Q ss_pred CccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhc
Q 005830 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 620 (675)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ 620 (675)
.+.|. +.+.++++++++.+++..||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|+|+|+++
T Consensus 594 v~~G~-el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkea 672 (902)
T PRK10517 594 VLIGS-DIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREA 672 (902)
T ss_pred ceeHH-HHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHh
Confidence 33333 33467788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCCC
Q 005830 621 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSPY 674 (675)
Q Consensus 621 ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~f 674 (675)
||+|+++++|+.|++++++||++|+|++|++.|.++.|+..++++++..++.||
T Consensus 673 ADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~ 726 (902)
T PRK10517 673 ADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPF 726 (902)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999887777665555553
No 4
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2.9e-112 Score=985.76 Aligned_cols=646 Identities=30% Similarity=0.475 Sum_probs=558.1
Q ss_pred ccccCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC----CC
Q 005830 19 LERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG----GG 93 (675)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~ 93 (675)
.|..+.+++++.|+++.+|||++|+++|+++||+|+++.++ .++|+.|++||++|+.++++++++++++++.. .+
T Consensus 27 ~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~ 106 (903)
T PRK15122 27 EAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRG 106 (903)
T ss_pred HHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 47789999999999998899999999999999999999876 56888999999999999999999999987421 12
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEEC------CeEEEEEcCCccCCcEEEecCCCee
Q 005830 94 RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD------GRWSEQDASILVPGDVISIKLGDIV 167 (675)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~------g~~~~i~~~~L~~GDiv~l~~G~~i 167 (675)
....|.++++|+++++++.+++++++++++++.++|++..+++++|+|| |++++|++++|+|||+|.|++||+|
T Consensus 107 ~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 107 EETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred ccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 2347889999999999999999999999999999999999999999999 4899999999999999999999999
Q ss_pred eeeEEEEecCCeeEeeccccCCCcccccCC-----------------------CCccccceeeeeceEEEEEEEecchhh
Q 005830 168 PADARLLEGDPLKIDQSALTGESLPVTKNP-----------------------YDEVFSGSTCKQGEIEAVVIATGVHTF 224 (675)
Q Consensus 168 PaD~~vl~g~~~~Vdes~LTGEs~pv~K~~-----------------------~~~v~aGt~v~~g~~~~~V~~tG~~T~ 224 (675)
||||+|++|+.+.||||+|||||.|+.|.+ +|.+|+||.+.+|.+.++|++||.+|.
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 999999999778999999999999999975 368999999999999999999999999
Q ss_pred hhhhhhhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 005830 225 FGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (675)
Q Consensus 225 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~ 304 (675)
+|++.+++.+.+..+++++.++++.+++..+..+++.+.+++.+ ....+|..++..++++++++|||+||++++++++.
T Consensus 267 ~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~-~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~ 345 (903)
T PRK15122 267 FGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING-FTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAK 345 (903)
T ss_pred hhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHH
Confidence 99999998776667889999888887644333222222222222 23457888999999999999999999999999999
Q ss_pred HHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccc--cCcChHHHH
Q 005830 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAA 382 (675)
Q Consensus 305 ~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~a 382 (675)
++.+|+++|+++|+.+++|+||++|++|||||||||+|+|++.+.+. ..+.+.++++.+++.++.. ..+||++.|
T Consensus 346 g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~---~~~~~~~~~l~~a~l~s~~~~~~~~p~e~A 422 (903)
T PRK15122 346 GAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLD---VSGRKDERVLQLAWLNSFHQSGMKNLMDQA 422 (903)
T ss_pred HHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEc---CCCCChHHHHHHHHHhCCCCCCCCChHHHH
Confidence 99999999999999999999999999999999999999999988652 2233455677666543322 235999999
Q ss_pred HHhhcCCh--HHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC----------ChHHHHHHHH
Q 005830 383 IVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHA 450 (675)
Q Consensus 383 i~~~~~~~--~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~ 450 (675)
++.++... ......++.++.+||++.+++|++++++.+|++++++|||||.++++|+. +++.++++.+
T Consensus 423 ll~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~ 502 (903)
T PRK15122 423 VVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLA 502 (903)
T ss_pred HHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHH
Confidence 99876432 11234577889999999999999998877788899999999999999963 2334566778
Q ss_pred HHHHHHHcCCeEEEEEeeccCCcCC-----CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q 005830 451 VIDKFAERGLRSLGVARQEIPEKTK-----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE 525 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~~~-----~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ 525 (675)
..+.++.+|+|++++||++++..+. +..|++|+|+|+++|+||+||+++++|++||++||+++|+|||++.||.+
T Consensus 503 ~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~a 582 (903)
T PRK15122 503 LAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK 582 (903)
T ss_pred HHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 8899999999999999998865431 23578999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCC
Q 005830 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (675)
Q Consensus 526 ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~ 605 (675)
+|+++||.. ...+.| .+.+.++++++.+.+++..||||++|+||.++|+.||++|++|+|+|||.||+|||++||
T Consensus 583 IA~~lGI~~----~~vi~G-~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~AD 657 (903)
T PRK15122 583 ICREVGLEP----GEPLLG-TEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD 657 (903)
T ss_pred HHHHcCCCC----CCccch-HhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCC
Confidence 999999953 223333 334467788899999999999999999999999999999999999999999999999999
Q ss_pred ccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 606 IGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 606 vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
||||||+|+|+|+++||+|+++|||+.|++++++||++|+|++|++.|.++.|+..++.+++..++.|
T Consensus 658 VGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~ 725 (903)
T PRK15122 658 VGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIP 725 (903)
T ss_pred EEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999887666544433333
No 5
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=4.7e-112 Score=983.44 Aligned_cols=640 Identities=30% Similarity=0.456 Sum_probs=559.8
Q ss_pred CccccCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 005830 18 DLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (675)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 96 (675)
+.|.++.+++++.|+++.+|||++|+.+|+++||+|+++.++ .++|+.|+++|++|++++++++++++++..
T Consensus 14 ~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------- 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------- 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh-------
Confidence 357889999999999998899999999999999999999887 458889999999999999999999999864
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEE------CCeEEEEEcCCccCCcEEEecCCCeeeee
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR------DGRWSEQDASILVPGDVISIKLGDIVPAD 170 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r------~g~~~~i~~~~L~~GDiv~l~~G~~iPaD 170 (675)
.|.++++++++++++.+++++++++++++.+++++..+++++|+| ||++++|++++|+|||+|.|++||+||||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaD 166 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPAD 166 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEccc
Confidence 788999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred EEEEecCCeeEeeccccCCCcccccCCCC-------------ccccceeeeeceEEEEEEEecchhhhhhhhhhhhccCC
Q 005830 171 ARLLEGDPLKIDQSALTGESLPVTKNPYD-------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ 237 (675)
Q Consensus 171 ~~vl~g~~~~Vdes~LTGEs~pv~K~~~~-------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~ 237 (675)
|+|++|+++.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++.+.++
T Consensus 167 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~ 246 (867)
T TIGR01524 167 ARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRG 246 (867)
T ss_pred EEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCC
Confidence 99999977899999999999999998874 69999999999999999999999999999999887667
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccc
Q 005830 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITK 317 (675)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk 317 (675)
++++++.++++++++..+.++.+.+.++++ .....+|..++..++++++++|||+||++++++++.++.+|+++|+++|
T Consensus 247 ~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk 325 (867)
T TIGR01524 247 QTAFDKGVKSVSKLLIRFMLVMVPVVLMIN-GLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVK 325 (867)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHheehH-HHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEc
Confidence 789999999999886554444333322222 2234578888999999999999999999999999999999999999999
Q ss_pred cchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccc--cCcChHHHHHHhhcCCh--HHH
Q 005830 318 RMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT--ENQDAIDAAIVGMLADP--KEA 393 (675)
Q Consensus 318 ~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~ai~~~~~~~--~~~ 393 (675)
+++++|+||++|++|||||||||+|+|++.+... ..+.+.++++.+++.++.. ..+||++.|++.++... ...
T Consensus 326 ~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~---~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~ 402 (867)
T TIGR01524 326 ELSAIQNFGAMDILCTDKTGTLTQDKIELEKHID---SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQT 402 (867)
T ss_pred cchhhhhccCccEEEecCCCccccCeEEEEEEec---CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhH
Confidence 9999999999999999999999999999988641 2233456667666544332 23599999999876532 223
Q ss_pred hcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEE
Q 005830 394 RAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSL 463 (675)
Q Consensus 394 ~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l 463 (675)
+..++.++.+||+|.+|+|++++.+.++.+++++||+||.++++|+. +++.++++.+.++.++++|+|++
T Consensus 403 ~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvl 482 (867)
T TIGR01524 403 ASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVI 482 (867)
T ss_pred hhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEE
Confidence 44677889999999999999988776666789999999999999963 23345677888899999999999
Q ss_pred EEEeeccCCcCC---CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC
Q 005830 464 GVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS 540 (675)
Q Consensus 464 ~~a~~~~~~~~~---~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~ 540 (675)
++|+++++..+. +..|++|+|+|+++|+||+|++++++|++|+++||+++|+|||++.||.++|+++||..+ .
T Consensus 483 avA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----~ 558 (867)
T TIGR01524 483 AVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----D 558 (867)
T ss_pred EEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----C
Confidence 999998865432 124789999999999999999999999999999999999999999999999999999632 2
Q ss_pred CccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhc
Q 005830 541 SLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA 620 (675)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ 620 (675)
.+.+. ....++++++.+.+++..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|+|+|+++
T Consensus 559 v~~g~-~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~a 637 (867)
T TIGR01524 559 FLLGA-DIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEA 637 (867)
T ss_pred eeecH-hhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHh
Confidence 33333 33456677888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 621 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 621 ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
||+|+++++|+.|++++++||++|+|++|++.|.++.|+..++.+++..++.|
T Consensus 638 ADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~ 690 (867)
T TIGR01524 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIP 690 (867)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999987776655444444
No 6
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-113 Score=998.32 Aligned_cols=648 Identities=34% Similarity=0.538 Sum_probs=567.4
Q ss_pred ccCccccCHH--HHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Q 005830 16 SVDLERIPIE--EVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANG 91 (675)
Q Consensus 16 ~~~~~~~~~~--~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (675)
...+|..+.+ ++...+.++ .+||+++|+.+|++.||+|+++..+ .+.|..|+.||++|+.+++++++++++++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~-- 97 (917)
T COG0474 20 SETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG-- 97 (917)
T ss_pred cccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 5567888888 999999888 8899999999999999999999765 678999999999999999999999999875
Q ss_pred CCCCCch----hhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCee
Q 005830 92 GGRDPDW----QDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (675)
Q Consensus 92 ~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~i 167 (675)
.| .++..|+.+++++.++.++++++++++++++++..+++++|+|||++++|++++|||||||++++||+|
T Consensus 98 -----~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~v 172 (917)
T COG0474 98 -----DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVV 172 (917)
T ss_pred -----cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCcc
Confidence 44 455678888899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEecCCeeEeeccccCCCcccccCC--------------CCccccceeeeeceEEEEEEEecchhhhhhhhhhhh
Q 005830 168 PADARLLEGDPLKIDQSALTGESLPVTKNP--------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD 233 (675)
Q Consensus 168 PaD~~vl~g~~~~Vdes~LTGEs~pv~K~~--------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~ 233 (675)
|||+++++++++.||||+|||||.|+.|.+ .|++|+||.+.+|++.++|++||.+|.+|++..++.
T Consensus 173 PAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~ 252 (917)
T COG0474 173 PADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLP 252 (917)
T ss_pred ccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhc
Confidence 999999999777999999999999999963 478999999999999999999999999999999998
Q ss_pred cc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhc
Q 005830 234 ST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQ 312 (675)
Q Consensus 234 ~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~ 312 (675)
.. ...+++++.++++..+++.+.+++.++.++..++....+|...+..+++++++++|++||+.++++++.++.+|+++
T Consensus 253 ~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~ 332 (917)
T COG0474 253 TKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAKD 332 (917)
T ss_pred cccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhc
Confidence 88 68899999999999887666555555444444443344488999999999999999999999999999999999999
Q ss_pred CcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCC------cH---HHHHHHHHHc--ccc------C
Q 005830 313 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE------KE---HVILLAARAS--RTE------N 375 (675)
Q Consensus 313 ~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~------~~---~~l~~~~~~~--~~~------~ 375 (675)
++++|+++++|+||++++||+|||||||+|+|+|.+++........+ .. +++..++.|+ ... .
T Consensus 333 ~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~ 412 (917)
T COG0474 333 NAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQA 412 (917)
T ss_pred cchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCceec
Confidence 99999999999999999999999999999999999988752011111 11 1333333332 111 4
Q ss_pred cChHHHHHHhhcC------ChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC-------Ch
Q 005830 376 QDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-------RE 442 (675)
Q Consensus 376 ~~~~~~ai~~~~~------~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~-------~~ 442 (675)
+||.|.|+++++. +.......+++++.+||+|.||||++++++.+|++++++|||||.|+++|+. .+
T Consensus 413 gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~ 492 (917)
T COG0474 413 GDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTE 492 (917)
T ss_pred CCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCH
Confidence 6999999998774 3444555667899999999999999999977788999999999999999973 45
Q ss_pred HHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC----CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCC
Q 005830 443 DVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK----ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 518 (675)
Q Consensus 443 ~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~----~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd 518 (675)
+.++.+.+..++|+++|+|++++|||.++..+. +..|++|+|+|+++|+||+|++++++|+.|+++||++||+|||
T Consensus 493 ~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD 572 (917)
T COG0474 493 EGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGD 572 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCC
Confidence 677899999999999999999999998766544 5789999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCH
Q 005830 519 QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDA 598 (675)
Q Consensus 519 ~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~ 598 (675)
|+.||.++|++||+..+... .....+.+...++++++.+.+++..||||++|+||.++|+.+|+.|++|+|+|||+||+
T Consensus 573 ~~~TA~aIa~~~Gi~~~~~~-~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 573 HVETAIAIAKECGIEAEAES-ALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CHHHHHHHHHHcCCCCCCCc-eeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 99999999999998754322 22333444456667788899999999999999999999999999999999999999999
Q ss_pred HHHHhCCccEEcC-CccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 005830 599 PALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQK 671 (675)
Q Consensus 599 ~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 671 (675)
||||+|||||||+ +|+|++|++||+++.+++|..++.++.+||++|.|+++++.|.++.|+..+++++++.++
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~ 725 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLF 725 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 799999999999999999999999999999999999999999999999976666555443
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=4.2e-112 Score=994.63 Aligned_cols=646 Identities=28% Similarity=0.434 Sum_probs=548.5
Q ss_pred ccCccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCC
Q 005830 16 SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGG 93 (675)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 93 (675)
..+||..+++++.+.|+++ .+|||++|+.+|+++||+|+++.++ .++|..|++||++|+.++++++++++++++
T Consensus 4 ~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~---- 79 (1053)
T TIGR01523 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH---- 79 (1053)
T ss_pred CCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh----
Confidence 4569999999999999999 6899999999999999999999876 678899999999999999999999999875
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEE
Q 005830 94 RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARL 173 (675)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~v 173 (675)
.|.++++|+++++++.++.+++|+++++++++|++..+++++|+|||++++|+++||||||||.|++||+|||||+|
T Consensus 80 ---~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rL 156 (1053)
T TIGR01523 80 ---DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRL 156 (1053)
T ss_pred ---hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeeEeeccccCCCcccccCCC---------------CccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC--
Q 005830 174 LEGDPLKIDQSALTGESLPVTKNPY---------------DEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-- 236 (675)
Q Consensus 174 l~g~~~~Vdes~LTGEs~pv~K~~~---------------~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-- 236 (675)
++++++.||||+|||||.|+.|.+. |++|+||.|.+|++.++|++||.+|.+|++.+++.+..
T Consensus 157 i~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~ 236 (1053)
T TIGR01523 157 IETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGL 236 (1053)
T ss_pred EEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhc
Confidence 9998899999999999999999642 57899999999999999999999999999999875421
Q ss_pred ----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH
Q 005830 237 ----------------------------------QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNL 282 (675)
Q Consensus 237 ----------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (675)
..+++++.+++++.++..+.++.+++.+++.+. ..+...+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~~~~~~~~~a 313 (1053)
T TIGR01523 237 FQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---DVDKEVAIYA 313 (1053)
T ss_pred cccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHHHHH
Confidence 138999999999887544433333322222111 1234566778
Q ss_pred HHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeec-----c--
Q 005830 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF-----A-- 355 (675)
Q Consensus 283 ~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~-----~-- 355 (675)
++++++++|++||+.++++++++++||+++++++|++.++|+||.+++||+|||||||+|+|+|.+++.... .
T Consensus 314 v~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~ 393 (1053)
T TIGR01523 314 ICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNS 393 (1053)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCC
Confidence 899999999999999999999999999999999999999999999999999999999999999998764210 0
Q ss_pred -cCC---------------------------------------------Cc---HHHHHHHHHHcc------------cc
Q 005830 356 -KGV---------------------------------------------EK---EHVILLAARASR------------TE 374 (675)
Q Consensus 356 -~~~---------------------------------------------~~---~~~l~~~~~~~~------------~~ 374 (675)
.++ .. .+++..++.|+. ..
T Consensus 394 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~ 473 (1053)
T TIGR01523 394 DDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKA 473 (1053)
T ss_pred CCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCceee
Confidence 000 00 123443443321 11
Q ss_pred CcChHHHHHHhhcCCh----------HHH-------------------hcCCcEEEEecCCccCcceEEEEEcCCC-cEE
Q 005830 375 NQDAIDAAIVGMLADP----------KEA-------------------RAGVREVHFLPFNPVDKRTALTYIDSDG-NWH 424 (675)
Q Consensus 375 ~~~~~~~ai~~~~~~~----------~~~-------------------~~~~~~~~~~~f~~~~k~~sv~~~~~~g-~~~ 424 (675)
.++|.|.|++.++... ... ...++.+..+||+|.+|||++++++.++ +++
T Consensus 474 ~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~ 553 (1053)
T TIGR01523 474 HGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYN 553 (1053)
T ss_pred CcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEE
Confidence 2589999998765210 011 2246789999999999999999986544 478
Q ss_pred EEEcCcHHHHHHhccC------------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcC------------CCCCCC
Q 005830 425 RASKGAPEQILALCNC------------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKT------------KESPGA 480 (675)
Q Consensus 425 ~~~kGa~e~i~~~~~~------------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~------------~~~~e~ 480 (675)
+|+|||||.|+++|+. +++.++++.+.+++|+++|+||+++||++++.++ ++..|+
T Consensus 554 ~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~ 633 (1053)
T TIGR01523 554 IYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAES 633 (1053)
T ss_pred EEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhcc
Confidence 9999999999999962 2344677888899999999999999999886532 234689
Q ss_pred CcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC-------CCCccCCccccccCc
Q 005830 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-------SSSLLGQDKDASIAA 553 (675)
Q Consensus 481 ~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-------~~~~~~~~~~~~~~~ 553 (675)
+|+|+|+++++||+|++++++|+.||++||+++|+|||++.||.++|+++||...... ......+.....+++
T Consensus 634 ~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~ 713 (1053)
T TIGR01523 634 DLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSD 713 (1053)
T ss_pred CCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCH
Confidence 9999999999999999999999999999999999999999999999999999643110 111222223335566
Q ss_pred ccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHhccCEEecCCChhH
Q 005830 554 LPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSV 632 (675)
Q Consensus 554 ~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~ 632 (675)
+++++..++..||||++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|++.|+++||+++++++|++
T Consensus 714 ~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~ 793 (1053)
T TIGR01523 714 EEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFAS 793 (1053)
T ss_pred HHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHH
Confidence 7788888888999999999999999999999999999999999999999999999998 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 005830 633 IISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQK 671 (675)
Q Consensus 633 i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 671 (675)
|++++.+||++|+|+++++.|.+++|+..++.++++.++
T Consensus 794 I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~ 832 (1053)
T TIGR01523 794 ILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAF 832 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999887777665554
No 8
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-114 Score=890.07 Aligned_cols=658 Identities=88% Similarity=1.307 Sum_probs=637.0
Q ss_pred chHhhhccccCccccCHHHHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 005830 8 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIA 87 (675)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 87 (675)
++++.++|..+...+|.|++.++|++...|||++|+.+|+++||+|++..++.+.+++|+..||+|+.|++..++++.+.
T Consensus 7 s~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaAAimA~~ 86 (942)
T KOG0205|consen 7 SLEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIG 86 (942)
T ss_pred chhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 37888888888999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCee
Q 005830 88 LANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIV 167 (675)
Q Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~i 167 (675)
+..+++.++.|.++..|..++++++.++|++|+++.+...+|++...++++|+|||+|.++++++||||||+.++.|++|
T Consensus 87 Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIi 166 (942)
T KOG0205|consen 87 LANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDII 166 (942)
T ss_pred HhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccCCCCchHHHHHH
Q 005830 168 PADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTA 247 (675)
Q Consensus 168 PaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~~~~~~~~~~~ 247 (675)
|||+++++|+-+.||+|.|||||.|+.|++|+.+|+||+|.+|++.++|++||.+|..|+.++++.+.+...+|++.++.
T Consensus 167 PaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHFqkVLt~ 246 (942)
T KOG0205|consen 167 PADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTG 246 (942)
T ss_pred cCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcC
Q 005830 248 IGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 327 (675)
Q Consensus 248 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~ 327 (675)
+..++++.+++++++.+.+.|+.+...+...+...+.+++..+|.++|..+++.+++++.||+++|.+++...++|+++.
T Consensus 247 IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAG 326 (942)
T KOG0205|consen 247 IGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 326 (942)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhC
Confidence 99999999999998888888888888888888888888888899999999999999999999999999999999999999
Q ss_pred ceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCc
Q 005830 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (675)
Q Consensus 328 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~ 407 (675)
+|++|+|||||||.|++.+.+.+++.+..+.++++++..|+.+++..+.|++|.|+++.+.+|.+.+.++++++++||++
T Consensus 327 mdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnP 406 (942)
T KOG0205|consen 327 MDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNP 406 (942)
T ss_pred ceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCc
Confidence 99999999999999999999988888899999999999999999999999999999999999999999999999999999
Q ss_pred cCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEE
Q 005830 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (675)
Q Consensus 408 ~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~ 487 (675)
..||....+.+++|+++.++|||||.|++.|+.+.++++..+..+++|+++|+|.+++|++..++...+.....++|+|+
T Consensus 407 V~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gl 486 (942)
T KOG0205|consen 407 VDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGL 486 (942)
T ss_pred cccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE
Q 005830 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (675)
Q Consensus 488 i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 567 (675)
.-+-||+|.++.++|+.....|+.|.|+|||....++..++++|+..++++.....+...+..+...+.++++++.+-|+
T Consensus 487 lp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfA 566 (942)
T KOG0205|consen 487 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFA 566 (942)
T ss_pred cccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHH
Q 005830 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 647 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i 647 (675)
.+.|+||.++|+.||++++.|+|+|||+||+|+|+.||+||++..++|+|+.++|+|++++.++.++.++..+|.+|+++
T Consensus 567 gVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrm 646 (942)
T KOG0205|consen 567 GVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRM 646 (942)
T ss_pred ccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHH
Q 005830 648 KNYTIYAVSITIRIVVSV 665 (675)
Q Consensus 648 ~~~i~~~~~~n~~~~~~~ 665 (675)
+.+..|+++..+-+++.+
T Consensus 647 knytiyavsitiriv~gf 664 (942)
T KOG0205|consen 647 KNYTIYAVSITIRIVFGF 664 (942)
T ss_pred hhheeeeehhHHHHHHHH
Confidence 999999988887654433
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2.8e-109 Score=974.23 Aligned_cols=666 Identities=25% Similarity=0.400 Sum_probs=560.1
Q ss_pred CccchHhhhcc-ccCccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHH
Q 005830 5 KAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAA 81 (675)
Q Consensus 5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~ 81 (675)
|+.|+++.+.+ .++||..+++++++.|+++ .+|||++|+++|+++||+|+++.++ .++|+.|+++|++|++++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~a 81 (997)
T TIGR01106 2 KKRDLDELKKEVEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIG 81 (997)
T ss_pred CcchhhhhhhhccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHH
Confidence 34466665555 6789999999999999999 7799999999999999999998865 5578899999999999999999
Q ss_pred HHHHHHHhc-C-----CCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccC
Q 005830 82 AIMAIALAN-G-----GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVP 155 (675)
Q Consensus 82 ~i~~~~~~~-~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~ 155 (675)
++++++... . ......|+++++++++++++.++++++++|+++.++++++..+.+++|+|||++++|++++|+|
T Consensus 82 a~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~ 161 (997)
T TIGR01106 82 AILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVV 161 (997)
T ss_pred HHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCC
Confidence 999877532 1 1123478889999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCC----------ccccceeeeeceEEEEEEEecchhhh
Q 005830 156 GDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYD----------EVFSGSTCKQGEIEAVVIATGVHTFF 225 (675)
Q Consensus 156 GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~----------~v~aGt~v~~g~~~~~V~~tG~~T~~ 225 (675)
||+|.|++||+|||||++++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+
T Consensus 162 GDiv~l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~ 241 (997)
T TIGR01106 162 GDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVM 241 (997)
T ss_pred CCEEEECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchh
Confidence 99999999999999999999977899999999999999998864 69999999999999999999999999
Q ss_pred hhhhhhhhcc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 005830 226 GKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (675)
Q Consensus 226 g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~ 304 (675)
|++.+++++. .+++++++.++++..++..++++..++.++ .+.....+|...+..++++++++|||+||++++++++.
T Consensus 242 g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~ 320 (997)
T TIGR01106 242 GRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFI-LSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTL 320 (997)
T ss_pred hHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHH
Confidence 9999988765 467899999999888755444333333222 22334567888888999999999999999999999999
Q ss_pred HHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeeccc---C--------CCc-----HHHHHHHH
Q 005830 305 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK---G--------VEK-----EHVILLAA 368 (675)
Q Consensus 305 ~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~---~--------~~~-----~~~l~~~~ 368 (675)
++.+|+++|+++|+++++|+||+++++|||||||||+|+|+|.+++...... + .+. +.++..++
T Consensus 321 ~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~a 400 (997)
T TIGR01106 321 TAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAG 400 (997)
T ss_pred HHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999876421100 0 111 13444444
Q ss_pred HHccc---------------cCcChHHHHHHhhcC----ChHHHhcCCcEEEEecCCccCcceEEEEEcC---CCcEEEE
Q 005830 369 RASRT---------------ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDS---DGNWHRA 426 (675)
Q Consensus 369 ~~~~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~---~g~~~~~ 426 (675)
.++.. ..++|.|.|+++++. +....+..++.++.+||+|.+|||++++... ++++++|
T Consensus 401 lcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~ 480 (997)
T TIGR01106 401 LCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLV 480 (997)
T ss_pred HcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEE
Confidence 44211 124789999988753 2344556788899999999999999887632 2467899
Q ss_pred EcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC--------C---CCCCCcEEE
Q 005830 427 SKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK--------E---SPGAPWQLV 485 (675)
Q Consensus 427 ~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~--------~---~~e~~l~~l 485 (675)
+|||||.|+++|+. +++.++.+.+.+++++++|+||+++||++++.++. + ..|++|+|+
T Consensus 481 ~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~fl 560 (997)
T TIGR01106 481 MKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFV 560 (997)
T ss_pred EeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEE
Confidence 99999999999962 23456778888999999999999999998865321 1 238899999
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC---------------------CCccC
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS---------------------SSLLG 544 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~---------------------~~~~~ 544 (675)
|+++++||+|++++++|++|+++|++++|+|||+..+|.++|+++|+..+.... ..+..
T Consensus 561 Gli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~ 640 (997)
T TIGR01106 561 GLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVH 640 (997)
T ss_pred EEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEE
Confidence 999999999999999999999999999999999999999999999996432110 01122
Q ss_pred CccccccCcccHHHHhhhcC--EEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHhcc
Q 005830 545 QDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSAS 621 (675)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~--v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~a 621 (675)
+.....++++++++.+.+.. ||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||||| .|+++++++|
T Consensus 641 G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aA 720 (997)
T TIGR01106 641 GSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 720 (997)
T ss_pred hHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhh
Confidence 22223455667777777654 99999999999999999999999999999999999999999999999 7999999999
Q ss_pred CEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhc
Q 005830 622 DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQK 671 (675)
Q Consensus 622 d~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~ 671 (675)
|+++++|+|++|++++.+||++|+|+++++.|.++.|+..+++.+++.++
T Consensus 721 DivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~ 770 (997)
T TIGR01106 721 DMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIA 770 (997)
T ss_pred ceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887766655554
No 10
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=4.9e-109 Score=969.98 Aligned_cols=645 Identities=25% Similarity=0.392 Sum_probs=545.1
Q ss_pred cCHHHHHHHcCCC-CCCCC--HHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHHHHHHHHHHHhc------C
Q 005830 22 IPIEEVFEQLKCS-REGLT--SDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVMEAAAIMAIALAN------G 91 (675)
Q Consensus 22 ~~~~~~~~~l~~~-~~GL~--~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~ 91 (675)
-+.++++++|+++ .+||| ++|+++|+++||+|+++.+++ ++|..|+++|++|++++++++++++++++. .
T Consensus 42 ~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~ 121 (941)
T TIGR01517 42 GGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGK 121 (941)
T ss_pred CCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhccccccc
Confidence 3788999999999 77999 999999999999999999875 678889999999999999999999998762 1
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc-CCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeee
Q 005830 92 GGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMAN-LAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPAD 170 (675)
Q Consensus 92 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD 170 (675)
.+....|+++++++++++++.++.++++++++++.+++++. .+++++|+|||++++|++++|+|||+|.|++||+||||
T Consensus 122 ~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD 201 (941)
T TIGR01517 122 ADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPAD 201 (941)
T ss_pred CccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEeccc
Confidence 22344799999998889999999999999999999998764 47799999999999999999999999999999999999
Q ss_pred EEEEecCCeeEeeccccCCCcccccCCCCc--cccceeeeeceEEEEEEEecchhhhhhhhhhhhccCCCCchHHHHHHH
Q 005830 171 ARLLEGDPLKIDQSALTGESLPVTKNPYDE--VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (675)
Q Consensus 171 ~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~--v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~~~~~~~~~~~~ 248 (675)
|+|++|+.+.||||+|||||.|+.|.+++. +|+||.+.+|.+.++|++||.+|.+|++.+++...++++++++.++++
T Consensus 202 ~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~ 281 (941)
T TIGR01517 202 GVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSEL 281 (941)
T ss_pred EEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHH
Confidence 999999789999999999999999998776 999999999999999999999999999999888776677999999998
Q ss_pred HHHHHHHHHHHHHHHHHHH---Hhcc---c---------cchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcC
Q 005830 249 GNFCICSIAVGIVAEIIIM---YPVQ---H---------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 313 (675)
Q Consensus 249 ~~~~~~~i~~~~~~~~~~~---~~~~---~---------~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~ 313 (675)
..++..++++.+++.++++ |... . .++...+..++++++++|||+||++++++++.++.+|+++|
T Consensus 282 ~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ 361 (941)
T TIGR01517 282 AGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDN 361 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCC
Confidence 8775433322222212111 1111 1 24667788899999999999999999999999999999999
Q ss_pred cccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccC-------CC--cHHHHHHHHHH-ccc----------
Q 005830 314 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG-------VE--KEHVILLAARA-SRT---------- 373 (675)
Q Consensus 314 i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~-------~~--~~~~l~~~~~~-~~~---------- 373 (675)
+++|+++++|+||+++++|||||||||+|+|++.+++....... .+ ..+++..++.+ +..
T Consensus 362 ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~ 441 (941)
T TIGR01517 362 NLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKR 441 (941)
T ss_pred CEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCcc
Confidence 99999999999999999999999999999999988764321100 00 12223322222 211
Q ss_pred -cCcChHHHHHHhhcC----ChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCC-------
Q 005830 374 -ENQDAIDAAIVGMLA----DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR------- 441 (675)
Q Consensus 374 -~~~~~~~~ai~~~~~----~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~------- 441 (675)
..++|.|.|++.++. +....+..++.++.+||++.+|+|+++++..++++++++|||||.++++|+.-
T Consensus 442 ~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~ 521 (941)
T TIGR01517 442 AFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEA 521 (941)
T ss_pred ccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCc
Confidence 125789999988763 23333445677888999999999999998767778999999999999999631
Q ss_pred ---hHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC---CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEE
Q 005830 442 ---EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK---ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515 (675)
Q Consensus 442 ---~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~---~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~ 515 (675)
.+.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||+|++++++|++||++|++++|+
T Consensus 522 ~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~mi 601 (941)
T TIGR01517 522 TPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMV 601 (941)
T ss_pred ccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEE
Confidence 0135677888899999999999999999865432 3347899999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCc
Q 005830 516 TGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGV 595 (675)
Q Consensus 516 TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ 595 (675)
|||++.||.++|+++||.... ...+.+. ....++++++++.+++..||||++|+||.++|+.+|++|++|+|+|||.
T Consensus 602 TGD~~~tA~~iA~~~GI~~~~--~~vi~G~-~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGv 678 (941)
T TIGR01517 602 TGDNIDTAKAIARNCGILTFG--GLAMEGK-EFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGT 678 (941)
T ss_pred CCCChHHHHHHHHHcCCCCCC--ceEeeHH-HhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 999999999999999997431 1223333 3345667788889999999999999999999999999999999999999
Q ss_pred cCHHHHHhCCccEEcC-CccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Q 005830 596 NDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNIL 669 (675)
Q Consensus 596 ND~~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~ 669 (675)
||+|||++|||||||| +|+|+|+++||+++++++|++|++++++||++|+|+++++.|.+++|+..++..++..
T Consensus 679 NDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~ 753 (941)
T TIGR01517 679 NDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGS 753 (941)
T ss_pred chHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999999999999999998766665443
No 11
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.8e-107 Score=949.56 Aligned_cols=630 Identities=30% Similarity=0.474 Sum_probs=546.8
Q ss_pred CccccCHHHHHHHcCCC-CCCCC-HHHHHHHHhhcCCCccCccc-ccHHHHHHHHH-HhHHHHHHHHHHHHHHHHhcCCC
Q 005830 18 DLERIPIEEVFEQLKCS-REGLT-SDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFM-WNPLSWVMEAAAIMAIALANGGG 93 (675)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GL~-~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~ 93 (675)
+||.++++++++.|+++ .+||| ++|+++|+++||+|+++.++ .++|+.|+++| ++|++++++++++++++++
T Consensus 3 ~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g---- 78 (884)
T TIGR01522 3 QYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG---- 78 (884)
T ss_pred chhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc----
Confidence 58999999999999999 67999 99999999999999999876 67788999999 8999999999999999875
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEE
Q 005830 94 RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARL 173 (675)
Q Consensus 94 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~v 173 (675)
.|.+++.++++++++..+.+++++++++.++++++..+++++|+|||++++|+++||+|||+|.|++||+|||||+|
T Consensus 79 ---~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 ---NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred ---chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 78888888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCeeEeeccccCCCcccccCCCC--------------ccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CC
Q 005830 174 LEGDPLKIDQSALTGESLPVTKNPYD--------------EVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QV 238 (675)
Q Consensus 174 l~g~~~~Vdes~LTGEs~pv~K~~~~--------------~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~ 238 (675)
++|+.+.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.+++++.. ++
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 99977899999999999999998863 7999999999999999999999999999999887754 57
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCccccc
Q 005830 239 GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 318 (675)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~ 318 (675)
+++++.+++++.++..+.++.+++.+++.|. ...+|..++..++++++++|||+||++++++++.++.||+++|+++|+
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~ 314 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-QGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRK 314 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccc
Confidence 8999999999987654433323332333333 456788899999999999999999999999999999999999999999
Q ss_pred chhhhhhcCceEEEecCCCccccCceeeeeeeeeeccc----C--C-------------------CcHHHHHHHHHHccc
Q 005830 319 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK----G--V-------------------EKEHVILLAARASRT 373 (675)
Q Consensus 319 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~----~--~-------------------~~~~~l~~~~~~~~~ 373 (675)
.+++|+||++|++|||||||||+|+|++.+++...... . . ...+++..++.++..
T Consensus 315 ~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 394 (884)
T TIGR01522 315 LPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNA 394 (884)
T ss_pred hHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCC
Confidence 99999999999999999999999999998876421000 0 0 012344444433322
Q ss_pred --------cCcChHHHHHHhhcCCh--HHHhcCCcEEEEecCCccCcceEEEEEcC-CCcEEEEEcCcHHHHHHhccC--
Q 005830 374 --------ENQDAIDAAIVGMLADP--KEARAGVREVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNC-- 440 (675)
Q Consensus 374 --------~~~~~~~~ai~~~~~~~--~~~~~~~~~~~~~~f~~~~k~~sv~~~~~-~g~~~~~~kGa~e~i~~~~~~-- 440 (675)
..+||++.|++.++... ...+..++.++.+||+|.+|||+++++.. +++++.++||+||.|+..|+.
T Consensus 395 ~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~ 474 (884)
T TIGR01522 395 KFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQ 474 (884)
T ss_pred eecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhh
Confidence 12479999999876421 22334578899999999999999988753 577899999999999999963
Q ss_pred ---------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCe
Q 005830 441 ---------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN 511 (675)
Q Consensus 441 ---------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~ 511 (675)
+++.++++.+.+++++++|+|++++||+++ +.+|+|+|+++++||+||+++++|+.|+++|++
T Consensus 475 ~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~ 546 (884)
T TIGR01522 475 KKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVR 546 (884)
T ss_pred hcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCe
Confidence 133456778888999999999999999975 467999999999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEE
Q 005830 512 VKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMT 591 (675)
Q Consensus 512 v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~i 591 (675)
++|+|||+..+|.++|+++||..... ..+. +.....++++++++.+++..||||++|+||..+|+.+|+.|++|+|+
T Consensus 547 v~miTGD~~~tA~~ia~~~Gi~~~~~--~~v~-g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mv 623 (884)
T TIGR01522 547 IIMITGDSQETAVSIARRLGMPSKTS--QSVS-GEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMT 623 (884)
T ss_pred EEEECCCCHHHHHHHHHHcCCCCCCC--ceeE-hHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 99999999999999999999975321 1222 33334566778888999999999999999999999999999999999
Q ss_pred CCCccCHHHHHhCCccEEcC-CccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005830 592 GDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVP 666 (675)
Q Consensus 592 GDg~ND~~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 666 (675)
|||.||+|||++|||||+|| +|+++++++||+++++++|+.+++++++||++|+|+++++.|.++.|+..++..+
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~ 699 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIA 699 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 99999999999999999998 7999999999999999999999999999999999999999999999988765553
No 12
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-108 Score=872.72 Aligned_cols=643 Identities=26% Similarity=0.395 Sum_probs=532.0
Q ss_pred CHHHHHHHcCCC-CCCCCH--HHHHHHHhhcCCCccCccccc-HHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCCCCCc
Q 005830 23 PIEEVFEQLKCS-REGLTS--DEGAHRLHVFGPNKLEEKKES-KVLKFLGFMWNPLSWVMEAAAIMAIALAN-GGGRDPD 97 (675)
Q Consensus 23 ~~~~~~~~l~~~-~~GL~~--~e~~~r~~~~G~N~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~ 97 (675)
..+++++.|+++ ..||+. +|..+|++.||+|.++.++++ +|+..|+.+.+.-..++.+++++++.+++ .++....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 588999999999 889987 889999999999999998855 56667899999998999999999999876 4455679
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh-cCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEec
Q 005830 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMA-NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (675)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g 176 (675)
|++++.|++.+++..++....+|+.+++.+.|.+ ....+..|+|||+.++|+..||+||||+.|+.||.+||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999988766555555555555555555544442 345678999999999999999999999999999999999999999
Q ss_pred CCeeEeeccccCCCcccccCC--CCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHH-
Q 005830 177 DPLKIDQSALTGESLPVTKNP--YDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC- 252 (675)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~--~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~- 252 (675)
+++.+|||++||||.++.|.+ ...+++||++.+|.+.++|+.+|.+|..|+++.++.... +++++|-++++++...
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 457899999999999999999999999999998887764 8899998888876542
Q ss_pred --HHHHHHHHHHHHHHHHhccc-----c---chH--------HHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCc
Q 005830 253 --ICSIAVGIVAEIIIMYPVQH-----R---KYR--------DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGA 314 (675)
Q Consensus 253 --~~~i~~~~~~~~~~~~~~~~-----~---~~~--------~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i 314 (675)
.+.++...++.+++.|+... . .+. ..+...+.++++++|++||+++++++++++++|.+++.
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 22222222222333343211 1 111 12233345677889999999999999999999999999
Q ss_pred ccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCC-------CcHHHHHH---HH-HHc------------
Q 005830 315 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV-------EKEHVILL---AA-RAS------------ 371 (675)
Q Consensus 315 ~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~-------~~~~~l~~---~~-~~~------------ 371 (675)
++|..+++|++|+.++||+|||||||.|+|++.+.++....+.. -++.+..+ .. ..+
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 99999999999999999999999999999999887663222210 11222211 11 111
Q ss_pred -cccCcChHHHHHHhhc----CChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC------
Q 005830 372 -RTENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC------ 440 (675)
Q Consensus 372 -~~~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~------ 440 (675)
....++|.++|++.+. .+.+..+.....++.+||+|.+|+|+++++.+++..++|+|||.|.++..|+.
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 0112489999998875 35566777788999999999999999999987776349999999999999973
Q ss_pred -----ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCc-------C-CCCCCCCcEEEEEecccCCCCcchHHHHHHHHh
Q 005830 441 -----REDVRKKVHAVIDKFAERGLRSLGVARQEIPEK-------T-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALN 507 (675)
Q Consensus 441 -----~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~-------~-~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~ 507 (675)
+++.+..+...++.|+.+|+|++++||+++... + .+..+.+|+++|+++++||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 345566889999999999999999999984332 1 245688999999999999999999999999999
Q ss_pred CCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCE
Q 005830 508 LGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHI 587 (675)
Q Consensus 508 ~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~ 587 (675)
|||+|.|+||||..||+++|.+|||.++.... ....+.+...+++++.+++..+.+|+||.+|.+|+.+|+.|+++|++
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~-~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDF-LALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCcc-ceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 99999999999999999999999998764442 33444555588899999999999999999999999999999999999
Q ss_pred EEEECCCccCHHHHHhCCccEEcC-CccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005830 588 CGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVP 666 (675)
Q Consensus 588 v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 666 (675)
|+++|||.||+|||++||||.||| .|+++||++||+|++||||++|+.++.|||+.|.||+|+++|.++.|+..++..|
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 8999999999999999999999999999999999999999999999987654443
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.5e-103 Score=929.86 Aligned_cols=627 Identities=24% Similarity=0.301 Sum_probs=511.3
Q ss_pred CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHH
Q 005830 35 REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTI 114 (675)
Q Consensus 35 ~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 114 (675)
.+|||++|+.+|+++||+|+++.+.+++|..|++++++|++++++++++++++ ..+|+++++++++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~-------~~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLL-------DEYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHh-------hhhHHHHHHHHHHHHHHHHH
Confidence 57999999999999999999999889999999999999998777666555444 24788999999999999999
Q ss_pred HHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEec--CCCeeeeeEEEEecCCeeEeeccccCCCcc
Q 005830 115 SFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQSALTGESLP 192 (675)
Q Consensus 115 ~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~--~G~~iPaD~~vl~g~~~~Vdes~LTGEs~p 192 (675)
.+++++++.++++++.. .++.++|+|||+|++|+++||+|||+|.|+ +|++|||||+|++| ++.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g-~~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG-SCIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC-cEEEecccccCCccc
Confidence 99999999888888544 578999999999999999999999999999 99999999999999 699999999999999
Q ss_pred cccCCC------------------Cccccceeeee-------ceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHH
Q 005830 193 VTKNPY------------------DEVFSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLT 246 (675)
Q Consensus 193 v~K~~~------------------~~v~aGt~v~~-------g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~ 246 (675)
+.|.+. +.+|+||.+.+ |.+.++|++||.+|..|++.+.+..++ ..+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 35999999985 789999999999999999998876653 4567777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhc
Q 005830 247 AIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMA 326 (675)
Q Consensus 247 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg 326 (675)
.+..+++.+.++++++. ++.+...+.++...+..++.++++++|++||++++++++.+..||+++|++|+++.++|.+|
T Consensus 368 ~~~~~l~~~a~i~~i~~-~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIYT-IIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 66555433222222221 11222335678888999999999999999999999999999999999999999999999999
Q ss_pred CceEEEecCCCccccCceeeeeeeeeecccC----------CCcHHHHHHHHHHcc------ccCcChHHHHHHhhcCCh
Q 005830 327 GMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----------VEKEHVILLAARASR------TENQDAIDAAIVGMLADP 390 (675)
Q Consensus 327 ~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----------~~~~~~l~~~~~~~~------~~~~~~~~~ai~~~~~~~ 390 (675)
++|++|||||||||+|+|.+.++........ .....++...+.|.. ...+||+|.|++++....
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999988764211100 011112222222211 123699999999875311
Q ss_pred ----HH--H-------------hcCCcEEEEecCCccCcceEEEEEcCC-CcEEEEEcCcHHHHHHhccCChHHHHHHHH
Q 005830 391 ----KE--A-------------RAGVREVHFLPFNPVDKRTALTYIDSD-GNWHRASKGAPEQILALCNCREDVRKKVHA 450 (675)
Q Consensus 391 ----~~--~-------------~~~~~~~~~~~f~~~~k~~sv~~~~~~-g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~ 450 (675)
.. . ...+++++.+||+|.+|||+++++..+ +++++++|||||.|+++|+. +..++++.+
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~-~~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSP-ETVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCC-cCCChhHHH
Confidence 00 0 135678899999999999999998643 56789999999999999984 345778889
Q ss_pred HHHHHHHcCCeEEEEEeeccCCc--------CCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHH
Q 005830 451 VIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 522 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~ 522 (675)
.+++++++|+||+++|||++++. ++++.|++|+|+|+++|+||+||+++++|+.|+++||+++|+|||++.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998742 2456789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCC-------------C--------------------------------------CccCCccc--c
Q 005830 523 GKETGRRLGMGTNMYPS-------------S--------------------------------------SLLGQDKD--A 549 (675)
Q Consensus 523 a~~ia~~~gi~~~~~~~-------------~--------------------------------------~~~~~~~~--~ 549 (675)
|.++|+++||....... . .+.|.... .
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 99999999996432100 0 00000000 0
Q ss_pred ccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCC
Q 005830 550 SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 629 (675)
Q Consensus 550 ~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~ 629 (675)
.+..+.+.+++.+..||||++|+||.++|+.+|+.|++|+|||||+||+||||+|||||||+++ |++ .+||+++.+++
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 0122345667778899999999999999999999999999999999999999999999999865 444 79999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HhhcCCC
Q 005830 630 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPN-ILQKSPY 674 (675)
Q Consensus 630 ~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~-~~~~~~f 674 (675)
|++++++|++||+++.|+++.+.|.+.+++...+++++ +...+||
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 889 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYLIGSNL 889 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcC
Confidence 99999999999999999999999999999887555533 3333443
No 14
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=6.2e-99 Score=881.22 Aligned_cols=601 Identities=31% Similarity=0.449 Sum_probs=501.5
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCC---CCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEEC
Q 005830 66 FLGFMWNPLSWVMEAAAIMAIALANGG---GRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD 142 (675)
Q Consensus 66 ~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~ 142 (675)
+++||++|++++++++++++++++... .....|.++++|+++++++..+.+++++++++.++++++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 368999999999999999999976321 12358999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCC-------------Cccccceeeee
Q 005830 143 GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY-------------DEVFSGSTCKQ 209 (675)
Q Consensus 143 g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~-------------~~v~aGt~v~~ 209 (675)
|++++|++++|||||+|.|++||+|||||+|++|+.+.||||+|||||.|+.|.++ |.+|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999997799999999999999999876 78999999999
Q ss_pred ceEEEEEEEecchhhhhhhhhhhhcc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-c----ccch----HHHH
Q 005830 210 GEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPV-Q----HRKY----RDGI 279 (675)
Q Consensus 210 g~~~~~V~~tG~~T~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~----~~~~----~~~~ 279 (675)
|++.++|++||.+|.+|++.+.++.. .+++++++.+++++.++..++++.+++.+++.+.. . ..+| ...+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999888765 46789999999998875543333222222222111 1 1123 2334
Q ss_pred HHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeec-----
Q 005830 280 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVF----- 354 (675)
Q Consensus 280 ~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~----- 354 (675)
..++++++++||++||++++++++.++++|+++|+++|+++++|+||++|++|||||||||+|+|++.+++....
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 456788899999999999999999999999999999999999999999999999999999999999988764210
Q ss_pred ------ccCCC-------------------cHHHHHHHHHHccc------------cCcChHHHHHHhhcCCh----H--
Q 005830 355 ------AKGVE-------------------KEHVILLAARASRT------------ENQDAIDAAIVGMLADP----K-- 391 (675)
Q Consensus 355 ------~~~~~-------------------~~~~l~~~~~~~~~------------~~~~~~~~ai~~~~~~~----~-- 391 (675)
...++ .+.++..++.|+.. ..++|.|.|++.++.+. .
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 00000 11233333333321 12589999998764211 0
Q ss_pred --------------HHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC-----------ChHHHH
Q 005830 392 --------------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC-----------REDVRK 446 (675)
Q Consensus 392 --------------~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~-----------~~~~~~ 446 (675)
..+..++.++.+||+|.+|||++++++ ++++++|+|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 123456788999999999999999876 467899999999999999963 134567
Q ss_pred HHHHHHHHHHH-cCCeEEEEEeeccCCcC----------CCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEE
Q 005830 447 KVHAVIDKFAE-RGLRSLGVARQEIPEKT----------KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMI 515 (675)
Q Consensus 447 ~~~~~~~~~~~-~G~r~l~~a~~~~~~~~----------~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~ 515 (675)
++.+.+++|++ +|+||+++||+.++.++ ++..|++|+|+|+++++||+|++++++|+.||++|++++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78888999999 99999999999986432 24568999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhCCCCCCCCC--CCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECC
Q 005830 516 TGDQLAIGKETGRRLGMGTNMYPS--SSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGD 593 (675)
Q Consensus 516 TGd~~~~a~~ia~~~gi~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGD 593 (675)
|||+..||.++|+++|+..+.... ..+.+.+ ...+++++......+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~-l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGRE-FDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHH-HhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 999999999999999997532111 1222222 2344555667777788899999999999999999999999999999
Q ss_pred CccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 005830 594 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNI 668 (675)
Q Consensus 594 g~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~ 668 (675)
|.||+|||++|||||+|++|++.++++||+++.+|+|+.+++++++||++|+|+++++.|.+++|+..++..+++
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~ 713 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLT 713 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999877766654
No 15
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-98 Score=799.55 Aligned_cols=671 Identities=26% Similarity=0.430 Sum_probs=565.7
Q ss_pred CCCccchHhhhcc-ccCccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccc-cHHHHHHHHHHhHHHHHHH
Q 005830 3 GDKAISLEEIKNE-SVDLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKE-SKVLKFLGFMWNPLSWVME 79 (675)
Q Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~~-~~~~~~~~~~~~~~~~~~~ 79 (675)
.+++.++++++++ +++.|++|++|+.+++.++ .+|||.+++.+++.+-|+|.+++|+. +.|.+|.+|+++.+.++++
T Consensus 22 ~~~~~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~ 101 (1019)
T KOG0203|consen 22 KKKKKELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLW 101 (1019)
T ss_pred cchhhhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHH
Confidence 4577888899999 8999999999999999999 99999999999999999999999884 4688999999999999999
Q ss_pred HHHHHHHHHhc---CC--C-CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCc
Q 005830 80 AAAIMAIALAN---GG--G-RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASIL 153 (675)
Q Consensus 80 ~~~i~~~~~~~---~~--~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L 153 (675)
++++++++-+. .. . .....+.+.++..++++..+..++|+.+..+.++.+.++.|..+.|+|||+...+..++|
T Consensus 102 ~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eel 181 (1019)
T KOG0203|consen 102 IGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEEL 181 (1019)
T ss_pred HHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhc
Confidence 99999998442 11 1 123444555666677788889999999999999999999999999999999999999999
Q ss_pred cCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCC----------CccccceeeeeceEEEEEEEecchh
Q 005830 154 VPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY----------DEVFSGSTCKQGEIEAVVIATGVHT 223 (675)
Q Consensus 154 ~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~----------~~v~aGt~v~~g~~~~~V~~tG~~T 223 (675)
|+||+|.++-|++||||.+++++..++||+|+|||||+|..+.+. |+-|.+|.+++|.+.++|++||.+|
T Consensus 182 VvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~T 261 (1019)
T KOG0203|consen 182 VVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRT 261 (1019)
T ss_pred ccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCce
Confidence 999999999999999999999999999999999999999998763 6789999999999999999999999
Q ss_pred hhhhhhhhhhc-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHH
Q 005830 224 FFGKAAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTM 302 (675)
Q Consensus 224 ~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~ 302 (675)
.+|+++.+... ...+++.+..++.+..+...+.+. +.+++++.....++.|..++..++.++++.+|.+|+..+++++
T Consensus 262 v~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~-~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~L 340 (1019)
T KOG0203|consen 262 VMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIF-LGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCL 340 (1019)
T ss_pred EEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHH-HHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhH
Confidence 99999988765 456788888888877663322222 2222332333347788888888999999999999999999999
Q ss_pred HHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccC----------------CCcHHHHHH
Q 005830 303 AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKG----------------VEKEHVILL 366 (675)
Q Consensus 303 ~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~----------------~~~~~~l~~ 366 (675)
....+||++++.++|+.++.|+||+..++|+|||||||+|.|+|.+.+++..... ..-..++++
T Consensus 341 tltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~ 420 (1019)
T KOG0203|consen 341 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRI 420 (1019)
T ss_pred HHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999998876421110 011234444
Q ss_pred HHHHccc---------------cCcChHHHHHHhhc----CChHHHhcCCcEEEEecCCccCcceEEEEEcCC---CcEE
Q 005830 367 AARASRT---------------ENQDAIDAAIVGML----ADPKEARAGVREVHFLPFNPVDKRTALTYIDSD---GNWH 424 (675)
Q Consensus 367 ~~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~---g~~~ 424 (675)
+..+.+. ..+++.+.|+++++ .+..+.++..+.+..+||+|.+|+.-.+....+ .++.
T Consensus 421 ~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~ 500 (1019)
T KOG0203|consen 421 ATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFL 500 (1019)
T ss_pred HHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccce
Confidence 4444321 23578889998876 344667778888899999999999877766543 5778
Q ss_pred EEEcCcHHHHHHhccC----------ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC-----------CCCCCCcE
Q 005830 425 RASKGAPEQILALCNC----------REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-----------ESPGAPWQ 483 (675)
Q Consensus 425 ~~~kGa~e~i~~~~~~----------~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-----------~~~e~~l~ 483 (675)
+..|||||.++++|+. ++...+.+++...++...|.||++|+++.++++++ +....+|.
T Consensus 501 l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~ 580 (1019)
T KOG0203|consen 501 LVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLR 580 (1019)
T ss_pred eeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhcc
Confidence 8999999999999973 45677888999999999999999999999986642 23467899
Q ss_pred EEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCC------------C---------Cc
Q 005830 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPS------------S---------SL 542 (675)
Q Consensus 484 ~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------~---------~~ 542 (675)
|+|++.+-||+|..+++++..||.+||+++|+|||++.||.++|+..||....... . .+
T Consensus 581 FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~V 660 (1019)
T KOG0203|consen 581 FLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAV 660 (1019)
T ss_pred ccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEE
Confidence 99999999999999999999999999999999999999999999999975422110 0 11
Q ss_pred cCCccccccCcccHHHHhhhcC--EEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHh
Q 005830 543 LGQDKDASIAALPVDELIEKAD--GFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARS 619 (675)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~~~~--v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~ 619 (675)
.-+.+...++.+++++++++.. ||||.||+||+.||+.+|++|.+|+++|||.||+||||.|||||||| .|+|++|+
T Consensus 661 ihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKq 740 (1019)
T KOG0203|consen 661 IHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQ 740 (1019)
T ss_pred EecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHh
Confidence 2223344677889999998765 99999999999999999999999999999999999999999999999 89999999
Q ss_pred ccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-HHHhhcCCC
Q 005830 620 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSV-PNILQKSPY 674 (675)
Q Consensus 620 ~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~-~~~~~~~~f 674 (675)
|||+||+||||++|+..+++||.+|+|+||.|+|.++.|++.+..+ +++++-.|+
T Consensus 741 AADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPL 796 (1019)
T KOG0203|consen 741 AADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPL 796 (1019)
T ss_pred hcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCc
Confidence 9999999999999999999999999999999999999999875554 444444554
No 16
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.6e-93 Score=787.81 Aligned_cols=541 Identities=22% Similarity=0.342 Sum_probs=440.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCCC--CCCch--hhHHHHHHHHHHHHHHHHH----HHHhHHHHHHHHHhcCCC-eEE
Q 005830 68 GFMWNPLSWVMEAAAIMAIALANGGG--RDPDW--QDFVGIIVLLVINSTISFI----EENNAGNAAAALMANLAP-KTK 138 (675)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~--~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~-~~~ 138 (675)
.++++|+.|+++++++++++++.... ....| ++.+.+.++++++.++..+ .++|++++.++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 35789999999999999998653110 00112 3344455555555555444 478999999999998876 676
Q ss_pred -EEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCC---CccccceeeeeceEEE
Q 005830 139 -VLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEA 214 (675)
Q Consensus 139 -V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~---~~v~aGt~v~~g~~~~ 214 (675)
|.|||++++|++++|+|||+|.|++||+|||||+|++| ...||||+|||||.|+.|++| +.+|+||.+.+|.+.+
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG-LATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEc-ceEEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 78999999999999999999999999999999999999 579999999999999999999 8899999999999999
Q ss_pred EEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCc
Q 005830 215 VVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIA 293 (675)
Q Consensus 215 ~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~ 293 (675)
+|+++|.+|.+||+.+++++++ ++++++.....+...+.+ ++++++.++ +++....++...+...+++++++|||+
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i--i~l~~~~~~-~~~~~~~~~~~~~~~~val~V~~IP~a 263 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI--IFLVVILTM-YPLAKFLNFNLSIAMLIALAVCLIPTT 263 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH--HHHHHHHHH-HHHHhhccHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999998765 678887655444322211 111111111 111111244456677788888999999
Q ss_pred chHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccc
Q 005830 294 MPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRT 373 (675)
Q Consensus 294 l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~ 373 (675)
|+..++++...++.||+|+|+++|+.+++|++|++|++|||||||||+|++.+.++.. ..+.+.++++..+..++..
T Consensus 264 L~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~---~~~~~~~~ll~~a~~~~~~ 340 (673)
T PRK14010 264 IGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIP---VKSSSFERLVKAAYESSIA 340 (673)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEe---CCCccHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999998887766431 2234455677776666544
Q ss_pred cCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCC-hHHHHHHHHHH
Q 005830 374 ENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHAVI 452 (675)
Q Consensus 374 ~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~~~ 452 (675)
+ .||++.|++.++..... .......+.+||++.+++|++.+ +|+ .+.||+|+.++++|+.. ...+..+.+..
T Consensus 341 s-~~P~~~AIv~~a~~~~~-~~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~ 413 (673)
T PRK14010 341 D-DTPEGRSIVKLAYKQHI-DLPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDALV 413 (673)
T ss_pred C-CChHHHHHHHHHHHcCC-CchhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHHH
Confidence 4 49999999887642110 00011234589999999998764 343 45699999999999742 12234466677
Q ss_pred HHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 005830 453 DKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (675)
Q Consensus 453 ~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi 532 (675)
++++++|+|+++++.+ ++++|+++++||+||+++++|++||++||+++|+|||++.||.++|+++||
T Consensus 414 ~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 414 KGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred HHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 8899999999998743 389999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCC
Q 005830 533 GTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (675)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~ 612 (675)
. .+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++||||||||+
T Consensus 481 ~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMgs 530 (673)
T PRK14010 481 D------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMNS 530 (673)
T ss_pred c------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeCC
Confidence 5 2699999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 005830 613 ATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSV 665 (675)
Q Consensus 613 ~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~ 665 (675)
|+|+||++||+|+++|||+.|++++++||++|.|+++++.|.++.|+...+..
T Consensus 531 GTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i 583 (673)
T PRK14010 531 GTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAI 583 (673)
T ss_pred CCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999765444
No 17
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.2e-91 Score=772.93 Aligned_cols=536 Identities=24% Similarity=0.326 Sum_probs=448.0
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcCC----C---CCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCC-eEEE
Q 005830 68 GFMWNPLSWVMEAAAIMAIALANGG----G---RDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAP-KTKV 139 (675)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~~~~~~~~----~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~V 139 (675)
.||++|+.++++++++++++++... + ....|...+.+++.+++..+++.++++|.++..++|++..+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5789999999999999999876311 1 112344445555566777788889999999999999998875 7999
Q ss_pred EECCe-EEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCCc---cccceeeeeceEEEE
Q 005830 140 LRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIEAV 215 (675)
Q Consensus 140 ~r~g~-~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~---v~aGt~v~~g~~~~~ 215 (675)
+|||+ +++|++++|+|||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+. +|+||.+.+|.+.++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG-~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~ 187 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIR 187 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEc-cEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEE
Confidence 99988 99999999999999999999999999999999 68999999999999999999988 999999999999999
Q ss_pred EEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcc
Q 005830 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAM 294 (675)
Q Consensus 216 V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l 294 (675)
|+++|.+|.+|++.+++++++ ++++++...+.+...+..++++.++..+.+.|+ .+.. .++..++++++++|||++
T Consensus 188 Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~al 264 (679)
T PRK01122 188 ITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTTI 264 (679)
T ss_pred EEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccchh
Confidence 999999999999999998774 578888777666554433222222221222222 2222 377888999999999999
Q ss_pred hHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHcccc
Q 005830 295 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 374 (675)
Q Consensus 295 ~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 374 (675)
+..++.+...++.||+|+|+++|+++++|.+|++|++|||||||||+|+|.+.++.. ..+.+.++++..++.++...
T Consensus 265 g~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~a~~~s~~s 341 (679)
T PRK01122 265 GGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLP---VPGVTEEELADAAQLSSLAD 341 (679)
T ss_pred hhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEe---CCCCCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999999999999988652 23456677777777776655
Q ss_pred CcChHHHHHHhhcCCh---HHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCC-hHHHHHHHH
Q 005830 375 NQDAIDAAIVGMLADP---KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVHA 450 (675)
Q Consensus 375 ~~~~~~~ai~~~~~~~---~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~~ 450 (675)
. ||.+.++++++... ......+...+.+||++.++++++.+ +| ..+.||++|.+++.|+.. ...++++.+
T Consensus 342 ~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~~ 415 (679)
T PRK01122 342 E-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELDA 415 (679)
T ss_pred C-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHHH
Confidence 4 89999998876431 11111234567889999887777643 34 578999999999999632 234567788
Q ss_pred HHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 005830 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 530 (675)
.+++++++|+|++++|++. +++|+++++|++|||++++|++||++||+++|+|||++.||.++|+++
T Consensus 416 ~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 8899999999999999754 899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 531 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
||+ .+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||
T Consensus 483 GId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 483 GVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred CCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe
Confidence 995 26999999999999999999999999999999999999999999999
Q ss_pred CCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 005830 611 ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659 (675)
Q Consensus 611 ~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~ 659 (675)
++|+|+|+++||+|++++||+.+++++++||++.-.--....|++...+
T Consensus 533 gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 533 NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 9999999999999999999999999999999988333334566655433
No 18
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.4e-91 Score=830.38 Aligned_cols=615 Identities=19% Similarity=0.236 Sum_probs=485.7
Q ss_pred cCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHH
Q 005830 50 FGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNA 125 (675)
Q Consensus 50 ~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 125 (675)
|.+|.+.+++|++| +.|++||.+|.|++|+++++++++...... ..+...++++++++++.+.+++++++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~--~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT--YRGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC--CccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999876 788999999999999999999998543322 234445566777778889999999999988
Q ss_pred HHHHHhcCCCeEEEEEC-CeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecC----CeeEeeccccCCCcccccCCC--
Q 005830 126 AAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY-- 198 (675)
Q Consensus 126 ~~~l~~~~~~~~~V~r~-g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~----~~~Vdes~LTGEs~pv~K~~~-- 198 (675)
.+.. ++..++|+|+ |++++++|++|+|||+|.|++||+||||++|++++ .+.||||+|||||.|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8654 4578999997 89999999999999999999999999999999853 389999999999999988631
Q ss_pred ----------------------------------------------Cccccceeeee-ceEEEEEEEecchhhhhhhhhh
Q 005830 199 ----------------------------------------------DEVFSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 231 (675)
Q Consensus 199 ----------------------------------------------~~v~aGt~v~~-g~~~~~V~~tG~~T~~g~~~~~ 231 (675)
|.+++||.+.+ |.+.|+|++||.+|++++..
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~-- 233 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNA-- 233 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcC--
Confidence 46789999998 89999999999999887532
Q ss_pred hhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----cch---------------HHHHHHHHHHHHHhccC
Q 005830 232 VDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH----RKY---------------RDGIDNLLVLLIGGIPI 292 (675)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~ll~~~iP~ 292 (675)
.....+.+++++.++++..+++.+.++.+++.+++.+.+.. ..| ...+..++.++..++|+
T Consensus 234 ~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 234 TQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred CCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 22234678999999999877554444333333332222111 011 22567788899999999
Q ss_pred cchHHHHHHHHHHH------HHHhhc----CcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCC----
Q 005830 293 AMPTVLSVTMAIGS------HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGV---- 358 (675)
Q Consensus 293 ~l~~~~~~~~~~~~------~~l~~~----~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~---- 358 (675)
+|++.+++++..++ .+|.++ ++.+|+.+.+|+||+|++||+|||||||+|+|++.++.+....++.
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999998 677764 4999999999999999999999999999999999998753211100
Q ss_pred -----------------------------C----------------cHHHHHHHHHHcc-------c-------cCcChH
Q 005830 359 -----------------------------E----------------KEHVILLAARASR-------T-------ENQDAI 379 (675)
Q Consensus 359 -----------------------------~----------------~~~~l~~~~~~~~-------~-------~~~~~~ 379 (675)
+ ..+++..++.|.. . ..++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 0112222222211 0 124899
Q ss_pred HHHHHhhcCChH------------------HHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccC-
Q 005830 380 DAAIVGMLADPK------------------EARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNC- 440 (675)
Q Consensus 380 ~~ai~~~~~~~~------------------~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~- 440 (675)
|.|++.++.... .....+++++.+||+|.||||+++++++++++++++|||||.|+++|+.
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999998653210 0123577888999999999999999988888999999999999999984
Q ss_pred ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC-------------------------CCCCCCcEEEEEecccCCCC
Q 005830 441 REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPR 495 (675)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~lG~i~~~d~lr 495 (675)
++..++++.+.+++++.+|+||+++|+|.+++++. +.+|++|+|+|+++++||+|
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 34567788899999999999999999999976431 34689999999999999999
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC-----------------------------------
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS----------------------------------- 540 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~----------------------------------- 540 (675)
++++++|+.||++||++||+|||+.+||.++|++||+........
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 999999999999999999999999999999999999975432110
Q ss_pred ----CccCCccccccC---cccHHHHhhhcC--EEEecCHHHHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCccEEc
Q 005830 541 ----SLLGQDKDASIA---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 541 ----~~~~~~~~~~~~---~~~~~~~~~~~~--v~~r~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
.+.|.......+ ...+.+++...+ ||||++|+||.++|+.+|+. |++|+|+|||+||+|||++|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 011111110111 112233444444 99999999999999999998 99999999999999999999999998
Q ss_pred C-CccHHHHhccCEEecCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 611 A-DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 611 ~-~~~~~a~~~ad~vl~~~~~~~i~~~i-~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
. .....|+.+||+++. +|+.+.+++ .+||.+|+|+++.+.|.++.|+.+++..+++.+++.
T Consensus 794 ~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~ 856 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNG 856 (1057)
T ss_pred cChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4 211247789999996 499999988 779999999999999999999999888888777653
No 19
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.8e-91 Score=750.10 Aligned_cols=628 Identities=23% Similarity=0.331 Sum_probs=494.8
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHH
Q 005830 26 EVFEQLKCSREGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGII 105 (675)
Q Consensus 26 ~~~~~l~~~~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~ 105 (675)
+..+......+||+.+++.+|+..||+|.+..+.++.+..++++..+|| ++|++.+++.|.. +.+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~------d~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLA------DSYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhc------ccchhhhhHHH
Confidence 4455555567899999999999999999999999999999999999999 7777777766653 34666677777
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecC-CCeeeeeEEEEecCCeeEeec
Q 005830 106 VLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL-GDIVPADARLLEGDPLKIDQS 184 (675)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~-G~~iPaD~~vl~g~~~~Vdes 184 (675)
++.+.+..+..++.++..+.++.+-+ .+..|+|+|||.|++|.++|||||||+.+.+ |-..|||+++++| +|.||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g-~civNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISG-DCIVNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeC-cEEeecc
Confidence 77788888888999888888877554 5578999999999999999999999999998 8999999999999 7899999
Q ss_pred cccCCCcccccCCC-------------------Cccccceeeee------ceEEEEEEEecchhhhhhhhhhhhccCCCC
Q 005830 185 ALTGESLPVTKNPY-------------------DEVFSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQVG 239 (675)
Q Consensus 185 ~LTGEs~pv~K~~~-------------------~~v~aGt~v~~------g~~~~~V~~tG~~T~~g~~~~~~~~~~~~~ 239 (675)
+|||||+|+.|.+- +.+|+||.+++ +.+.++|++||.+|..|++.+.+..++. .
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP-~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKP-V 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCC-c
Confidence 99999999999874 46899999986 5699999999999999998887776653 3
Q ss_pred chHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCccccc
Q 005830 240 HFQKVLTAIGNFCICSIAVG-IVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKR 318 (675)
Q Consensus 240 ~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~ 318 (675)
+++-+.+.+..+..+.++.+ .++..++.+...+.+....+.+++.++...+|+|||.++++...++..||.|+||+|.+
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCis 458 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCIS 458 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcC
Confidence 33433344333222222111 11122223345677888899999999999999999999999999999999999999999
Q ss_pred chhhhhhcCceEEEecCCCccccCceeeeeeeeeecc-----------------------cC-CCcHHHHHHHHHHcc--
Q 005830 319 MTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFA-----------------------KG-VEKEHVILLAARASR-- 372 (675)
Q Consensus 319 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-----------------------~~-~~~~~~l~~~~~~~~-- 372 (675)
|+++...|++|++|||||||||++.+.+........+ .+ ..+...+..+...++
T Consensus 459 P~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL 538 (1140)
T KOG0208|consen 459 PQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSL 538 (1140)
T ss_pred ccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhcee
Confidence 9999999999999999999999999998665431100 00 001011111111111
Q ss_pred -----ccCcChHHHHHHhhcC------------------------ChHH-----H----hcCCcEEEEecCCccCcceEE
Q 005830 373 -----TENQDAIDAAIVGMLA------------------------DPKE-----A----RAGVREVHFLPFNPVDKRTAL 414 (675)
Q Consensus 373 -----~~~~~~~~~ai~~~~~------------------------~~~~-----~----~~~~~~~~~~~f~~~~k~~sv 414 (675)
...+||+|..+.+... +|.. . ...+.+++.+||+|..+||||
T Consensus 539 ~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSV 618 (1140)
T KOG0208|consen 539 TLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSV 618 (1140)
T ss_pred EEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEE
Confidence 1124666654433210 0100 0 114678899999999999999
Q ss_pred EEEcC-CCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCc--------CCCCCCCCcEEE
Q 005830 415 TYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEK--------TKESPGAPWQLV 485 (675)
Q Consensus 415 ~~~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~--------~~~~~e~~l~~l 485 (675)
++.+. +.+.++|+|||||.|.++|+ .+.++..+++.++.|+.+|+|++++|+|+++.. .++..|++|+|+
T Consensus 619 Iv~~~~e~~~~~ftKGaPE~I~~ic~-p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~Fl 697 (1140)
T KOG0208|consen 619 IVSTGGEDKMMVFTKGAPESIAEICK-PETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFL 697 (1140)
T ss_pred EEecCCCCceEeeccCCHHHHHHhcC-cccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceee
Confidence 99875 46789999999999999998 457889999999999999999999999999866 367899999999
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCC------------------------C
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSS------------------------S 541 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~------------------------~ 541 (675)
|++.|++++|+.++.+|++|++++|+++|+||||..||..+||+|||.......- .
T Consensus 698 GLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~ 777 (1140)
T KOG0208|consen 698 GLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQ 777 (1140)
T ss_pred EEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccc
Confidence 9999999999999999999999999999999999999999999999964321000 0
Q ss_pred c--------------------cCCccccccCcc-----------cHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEE
Q 005830 542 L--------------------LGQDKDASIAAL-----------PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGM 590 (675)
Q Consensus 542 ~--------------------~~~~~~~~~~~~-----------~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~ 590 (675)
. ...+....+++. .++.++.+..|||||+|.||.++|+.||+.|+.|+|
T Consensus 778 ~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vgf 857 (1140)
T KOG0208|consen 778 FLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGF 857 (1140)
T ss_pred cCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEe
Confidence 0 000000112222 245566788999999999999999999999999999
Q ss_pred ECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 005830 591 TGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVP 666 (675)
Q Consensus 591 iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~ 666 (675)
||||+|||.|||+|||||+++++. |.-||.+.-.-.+.+.+.+.|++||+.+-.--..+.|-..|.+....+++
T Consensus 858 CGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~ 931 (1140)
T KOG0208|consen 858 CGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV 931 (1140)
T ss_pred cCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999998542 44478887777799999999999999877777777777777766544443
No 20
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.8e-89 Score=753.94 Aligned_cols=508 Identities=27% Similarity=0.385 Sum_probs=445.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEE-CCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEe
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r-~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~ 175 (675)
+|.++.++++++.++..++.+...|+++++++|+++.|.++++++ ||++++||.++|++||+|.|+|||+||+||+|++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 446778888999999999999999999999999999999998776 5658999999999999999999999999999999
Q ss_pred cCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHH
Q 005830 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (675)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 254 (675)
| ...||||+|||||.|+.|.+||.||+||.+.+|.+..+|+++|.+|.++++.+++++++ ++++.|+..|+++.++++
T Consensus 253 G-~s~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp 331 (713)
T COG2217 253 G-SSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVP 331 (713)
T ss_pred C-cEEeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHH
Confidence 9 56899999999999999999999999999999999999999999999999999999885 789999999999999888
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEec
Q 005830 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (675)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~D 334 (675)
.+++..++.+++|++....+|..++..++++++++|||+|.+++|++...++.+.+++||++|+++++|.++++|+++||
T Consensus 332 ~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFD 411 (713)
T COG2217 332 VVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFD 411 (713)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEe
Confidence 66655555555555554468999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEE
Q 005830 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (675)
Q Consensus 335 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv 414 (675)
||||||+|+|.+.++.. ..+ +.+++|.+++..+..+. ||++.|+++++.... .......+.+|-.. +
T Consensus 412 KTGTLT~G~p~v~~v~~---~~~-~e~~~L~laAalE~~S~-HPiA~AIv~~a~~~~--~~~~~~~~~i~G~G------v 478 (713)
T COG2217 412 KTGTLTEGKPEVTDVVA---LDG-DEDELLALAAALEQHSE-HPLAKAIVKAAAERG--LPDVEDFEEIPGRG------V 478 (713)
T ss_pred CCCCCcCCceEEEEEec---CCC-CHHHHHHHHHHHHhcCC-ChHHHHHHHHHHhcC--CCCccceeeeccCc------E
Confidence 99999999999998763 223 77889999999888877 999999998664322 11122233333211 1
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCC
Q 005830 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (675)
Q Consensus 415 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~l 494 (675)
.. ..+| ..+..|+++.+.+.-.. ... .....+.+.++|..++.++.+. +++|+++++|++
T Consensus 479 ~~-~v~g--~~v~vG~~~~~~~~~~~---~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~ 538 (713)
T COG2217 479 EA-EVDG--ERVLVGNARLLGEEGID---LPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADEL 538 (713)
T ss_pred EE-EECC--EEEEEcCHHHHhhcCCC---ccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCC
Confidence 11 1255 45677999987653211 111 4566778888999999999987 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHH
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 574 (675)
|++++++|++||+.|++++|+|||+..+|.++|+++||+. +++.+.|++|
T Consensus 539 R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------------------------v~AellPedK 588 (713)
T COG2217 539 RPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------------------------VRAELLPEDK 588 (713)
T ss_pred ChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------------------------heccCCcHHH
Confidence 9999999999999999999999999999999999999953 6999999999
Q ss_pred HHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005830 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (675)
Q Consensus 575 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 654 (675)
.++|+.||++|++|+|+|||.||+|||++||||||||.|+|+|+++||+++++++++.++++++++|+++++||||+.|+
T Consensus 589 ~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A 668 (713)
T COG2217 589 AEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWA 668 (713)
T ss_pred HHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHH
Q 005830 655 VSITIRIVVSVPNI 668 (675)
Q Consensus 655 ~~~n~~~~~~~~~~ 668 (675)
+.||..++....+.
T Consensus 669 ~~yn~~~iplA~~g 682 (713)
T COG2217 669 FGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999887666543
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=5.1e-87 Score=738.40 Aligned_cols=538 Identities=22% Similarity=0.314 Sum_probs=448.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHhcC-----C-CCCCchhhHH---HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCC-eE
Q 005830 68 GFMWNPLSWVMEAAAIMAIALANG-----G-GRDPDWQDFV---GIIVLLVINSTISFIEENNAGNAAAALMANLAP-KT 137 (675)
Q Consensus 68 ~~~~~~~~~~~~~~~i~~~~~~~~-----~-~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 137 (675)
.||.+|+.++++++++++++++.. . +....|+++. .+++.+++..+++.++++|.+++.++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 468899999999999999987541 1 1112466543 233446777888889999999999999988776 48
Q ss_pred EEEE-CCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCCc---cccceeeeeceEE
Q 005830 138 KVLR-DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDE---VFSGSTCKQGEIE 213 (675)
Q Consensus 138 ~V~r-~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~---v~aGt~v~~g~~~ 213 (675)
+|+| ||++++|++++|+|||+|.+++||+|||||+|++| .+.||||+|||||.|+.|++|+. +|+||.+.+|.+.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG-~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG-VASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEc-cEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 89999999999999999999999999999999999 78999999999999999999975 8999999999999
Q ss_pred EEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccC
Q 005830 214 AVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 292 (675)
Q Consensus 214 ~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~ 292 (675)
++|+++|.+|.+|++.++++.++ ++++++...+.+..++.+++++.++ .++++........++...+++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~---~~~~~~~~~~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTA---TLWPFAAYGGNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcChhHHHHHHHHHHHHhCch
Confidence 99999999999999999998764 5788887777665544332222111 1111111112233567778899999999
Q ss_pred cchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHcc
Q 005830 293 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASR 372 (675)
Q Consensus 293 ~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~ 372 (675)
+++...+.....++.|++|+|+++|+.+++|++|++|++|||||||||+|+|++.++.. ..+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~---~~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIP---AQGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEe---cCCCcHHHHHHHHHHhcC
Confidence 99888888878899999999999999999999999999999999999999999988652 234566778887777766
Q ss_pred ccCcChHHHHHHhhcCChHH--HhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCC-hHHHHHHH
Q 005830 373 TENQDAIDAAIVGMLADPKE--ARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCR-EDVRKKVH 449 (675)
Q Consensus 373 ~~~~~~~~~ai~~~~~~~~~--~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~-~~~~~~~~ 449 (675)
.++ ||.+.+++.++..... ........+..||++.++++++... +| ..+.||+||.++++|+.. ...+.+++
T Consensus 341 ~s~-hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 ADD-TPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred CCC-CcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 554 9999999887642110 0111234577899998776665432 45 568999999999888532 23446677
Q ss_pred HHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH
Q 005830 450 AVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR 529 (675)
Q Consensus 450 ~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~ 529 (675)
+.+++++++|.|++++|++. +++|+++++|++||+++++|++||++|++++|+|||+..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88889999999999999864 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEE
Q 005830 530 LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (675)
Q Consensus 530 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia 609 (675)
+|+. .+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9995 2699999999999999999999999999999999999999999999
Q ss_pred cCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 005830 610 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 660 (675)
Q Consensus 610 ~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~ 660 (675)
|++|++.++++||++++++||+.+++++++||+++-+......|+++.++.
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 999999999999999999999999999999999998888899999888775
No 22
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.8e-87 Score=788.36 Aligned_cols=617 Identities=17% Similarity=0.164 Sum_probs=480.6
Q ss_pred hhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhHH
Q 005830 48 HVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAG 123 (675)
Q Consensus 48 ~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 123 (675)
.+|..|.+.+.+|++| +.+++||.++.|++|+++++++++...... ..+...+++++++++..+.+.+++++++
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~--~~~t~~~PL~~vl~v~~ike~~Ed~~r~ 162 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF--GRGASILPLAFVLLVTAVKDAYEDWRRH 162 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC--CcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999999976 678999999999999999999988644321 2455667788888888889999999998
Q ss_pred HHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecC----CeeEeeccccCCCcccccCCC-
Q 005830 124 NAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKNPY- 198 (675)
Q Consensus 124 ~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~----~~~Vdes~LTGEs~pv~K~~~- 198 (675)
++.+.. ++..++|+|+|++++++|++|+|||+|+|++||+||||+++++++ .+.||||+|||||.|+.|.++
T Consensus 163 k~d~~~---N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~ 239 (1178)
T PLN03190 163 RSDRIE---NNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQ 239 (1178)
T ss_pred HhHHhh---cCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccc
Confidence 887764 457899999999999999999999999999999999999999832 589999999999999999653
Q ss_pred --------------------------------------------Cccccceeeeec-eEEEEEEEecchhhhhhhhhhhh
Q 005830 199 --------------------------------------------DEVFSGSTCKQG-EIEAVVIATGVHTFFGKAAHLVD 233 (675)
Q Consensus 199 --------------------------------------------~~v~aGt~v~~g-~~~~~V~~tG~~T~~g~~~~~~~ 233 (675)
|.+++||.+.+. .+.|+|++||++|+... +...
T Consensus 240 ~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~--N~~~ 317 (1178)
T PLN03190 240 ETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAML--NNSG 317 (1178)
T ss_pred hhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhh--cCCC
Confidence 234555555554 59999999999997421 2222
Q ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhccc-c------------------------ch----HHHHHHH
Q 005830 234 STNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIM--YPVQH-R------------------------KY----RDGIDNL 282 (675)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~-~------------------------~~----~~~~~~~ 282 (675)
.+.+.+++++.++++..+++++.++.++++.++. |.... . .| ...+..+
T Consensus 318 ~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 397 (1178)
T PLN03190 318 APSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMS 397 (1178)
T ss_pred CCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 2347789999999988775544433333322221 21100 0 00 1123344
Q ss_pred HHHHHHhccCcchHHHHHHHHHHHHHHhhcC----------cccccchhhhhhcCceEEEecCCCccccCceeeeeeeee
Q 005830 283 LVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIE 352 (675)
Q Consensus 283 ~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~----------i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~ 352 (675)
+.++..++|++|++.+++++..++.++.++. +.+|+.+..|+||+|++||+|||||||+|+|++.++.+.
T Consensus 398 lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~ 477 (1178)
T PLN03190 398 VIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIW 477 (1178)
T ss_pred HHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEEC
Confidence 5677789999999999999988788877654 679999999999999999999999999999999998763
Q ss_pred ecccC-----------------------------------------CC-c-----HHHHHHHHHHcc-------------
Q 005830 353 VFAKG-----------------------------------------VE-K-----EHVILLAARASR------------- 372 (675)
Q Consensus 353 ~~~~~-----------------------------------------~~-~-----~~~l~~~~~~~~------------- 372 (675)
...++ .. . .+++...+.|..
T Consensus 478 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~ 557 (1178)
T PLN03190 478 GVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPT 557 (1178)
T ss_pred CEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCcc
Confidence 21110 00 0 112222222211
Q ss_pred -----ccCcChHHHHHHhhcCC----------------hHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcH
Q 005830 373 -----TENQDAIDAAIVGMLAD----------------PKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAP 431 (675)
Q Consensus 373 -----~~~~~~~~~ai~~~~~~----------------~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~ 431 (675)
....+|.|.|++..+.. ....+..++.++.+||+|.|||||++++++++++++|+||||
T Consensus 558 ~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~ 637 (1178)
T PLN03190 558 VKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGAD 637 (1178)
T ss_pred ccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCc
Confidence 11127889999887632 122355688999999999999999999988888999999999
Q ss_pred HHHHHhccCC--hHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC-------------------------CCCCCCcEE
Q 005830 432 EQILALCNCR--EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQL 484 (675)
Q Consensus 432 e~i~~~~~~~--~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~ 484 (675)
|.|+++|+.. ...++++.+.+++|+++|+|||++|||.+++++. +.+|++|++
T Consensus 638 e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~ 717 (1178)
T PLN03190 638 TSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTI 717 (1178)
T ss_pred HHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEE
Confidence 9999999742 3456788899999999999999999999975431 346899999
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCC-------------------
Q 005830 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQ------------------- 545 (675)
Q Consensus 485 lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~------------------- 545 (675)
+|+++++|++|++++++|++|+++|+++||+|||+.+||.++|+.|||.........+...
T Consensus 718 lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~ 797 (1178)
T PLN03190 718 LGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKL 797 (1178)
T ss_pred EEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhc
Confidence 9999999999999999999999999999999999999999999999997543211000000
Q ss_pred -------------------ccccccCcc------------cHHHHhhhcC--EEEecCHHHHHHHHHHHHhC-CCEEEEE
Q 005830 546 -------------------DKDASIAAL------------PVDELIEKAD--GFAGVFPEHKYEIVKRLQER-KHICGMT 591 (675)
Q Consensus 546 -------------------~~~~~~~~~------------~~~~~~~~~~--v~~r~~p~~K~~iv~~l~~~-~~~v~~i 591 (675)
.....+++. .+.++..++. ||||++|.||+++|+.+|+. +++|+||
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaI 877 (1178)
T PLN03190 798 TTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAI 877 (1178)
T ss_pred cccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 000011122 2334444444 79999999999999999997 5799999
Q ss_pred CCCccCHHHHHhCCccEEc-C-CccHHHHhccCEEecCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 005830 592 GDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIRIVVSVPNI 668 (675)
Q Consensus 592 GDg~ND~~al~~A~vgia~-~-~~~~~a~~~ad~vl~~~~~~~i~~~i~-~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~ 668 (675)
|||+||++||++|||||++ | +|.++ ..+||+.+ +.|..+.+++. +||..|+|+.+.+.|.++.|+.++++.++|
T Consensus 878 GDGaNDv~mIq~AdVGIGIsG~EG~qA-~~aSDfaI--~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f 954 (1178)
T PLN03190 878 GDGANDVSMIQMADVGVGISGQEGRQA-VMASDFAM--GQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWY 954 (1178)
T ss_pred CCCcchHHHHHhcCeeeeecCchhHHH-HHhhccch--hhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 4 45554 45999999 56888999875 699999999999999999999999999999
Q ss_pred hhcCCC
Q 005830 669 LQKSPY 674 (675)
Q Consensus 669 ~~~~~f 674 (675)
.+++.|
T Consensus 955 ~~~~~f 960 (1178)
T PLN03190 955 VLFTCF 960 (1178)
T ss_pred HHHHcC
Confidence 999876
No 23
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2.7e-82 Score=723.76 Aligned_cols=502 Identities=26% Similarity=0.360 Sum_probs=440.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEec
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g 176 (675)
.|.++.+++++++++..++.+.+.|+++.+++|++..|++++|+|||++++|++++|+|||+|+|++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 56778888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHH
Q 005830 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (675)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (675)
...||||+|||||.|+.|.+|+.||+||.+.+|.+.++|+++|.+|.++++.+++++++ +++++++.+++++.++...
T Consensus 285 -~~~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 -FASFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred -cEEeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999998874 6799999999999998776
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecC
Q 005830 256 IAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDK 335 (675)
Q Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DK 335 (675)
++++.++.++++++....+|..++..++++++++|||+|.+++|+++..+..+++|+||++|+++++|.++++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 66656555555545556678888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEEE
Q 005830 336 TGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALT 415 (675)
Q Consensus 336 TGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~ 415 (675)
|||||+|+|+|.++.. ..+.+.++++.+++..+..+. ||++.|+++++... .. .+||.+..+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~~---~~~~~~~~~l~~aa~~e~~s~-hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIHP---ATGISESELLALAAAVEQGST-HPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEEe---cCCCCHHHHHHHHHHHhcCCC-CHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 9999999999988652 234567778888877665544 99999999876321 11 24565555544211
Q ss_pred -E-EcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCC
Q 005830 416 -Y-IDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDP 493 (675)
Q Consensus 416 -~-~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~ 493 (675)
+ ...+|+. +..|+|+.+.+ ..+.+...++.+..+|+|+++++++. +++|+++|+|+
T Consensus 511 Gv~~~~~g~~--~~ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGER--VLICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEE--EEEecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 1 1235643 34689998754 11334555678889999999999865 89999999999
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
+|++++++|++|++.|++++|+|||+..++.++|+++||. .+++.+|++
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999984 367889999
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 653 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~ 653 (675)
|..+|+.+|+. +.|+|+|||.||+|||++|||||+|+++++.++++||+++.++++..+++++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 58999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHH
Q 005830 654 AVSITIRIVVSVP 666 (675)
Q Consensus 654 ~~~~n~~~~~~~~ 666 (675)
++.||+.++...+
T Consensus 697 a~~~n~~~i~~a~ 709 (741)
T PRK11033 697 ALGLKAIFLVTTL 709 (741)
T ss_pred HHHHHHHHHHHHH
Confidence 9999987765543
No 24
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-84 Score=697.54 Aligned_cols=522 Identities=24% Similarity=0.348 Sum_probs=450.4
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCe-EEEEEcCCccCCcEEEecCCCeeeeeEEE
Q 005830 95 DPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARL 173 (675)
Q Consensus 95 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~L~~GDiv~l~~G~~iPaD~~v 173 (675)
...|.+..+++.++.+...++.....++..++..|+.+.|.++.++.+|+ .++||.+.|++||+|.|.||++||+||+|
T Consensus 338 ~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 338 PTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred chhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 34555666777888888889988899999999999999999999999996 89999999999999999999999999999
Q ss_pred EecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHH
Q 005830 174 LEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFC 252 (675)
Q Consensus 174 l~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~ 252 (675)
++| ++.||||++|||++||.|.+|+.|.+||.+.+|.+...++++|.+|.+++|.+++++++ .+.|.|+.+|+++.++
T Consensus 418 v~G-ss~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yF 496 (951)
T KOG0207|consen 418 VDG-SSEVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYF 496 (951)
T ss_pred EeC-ceeechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcC
Confidence 999 67999999999999999999999999999999999999999999999999999999985 7889999999999998
Q ss_pred HHHHHHHHHHHHHHHHhccc----------cchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhh
Q 005830 253 ICSIAVGIVAEIIIMYPVQH----------RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAI 322 (675)
Q Consensus 253 ~~~i~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~l 322 (675)
...+++..++.+++|.+... ..+..++..++++++++|||+|.+++|++...+....+++|+++|..+.+
T Consensus 497 vP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~L 576 (951)
T KOG0207|consen 497 VPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEAL 576 (951)
T ss_pred CchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHH
Confidence 77777766665555554333 44567788899999999999999999999999999999999999999999
Q ss_pred hhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHh--cCCcEE
Q 005830 323 EEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEAR--AGVREV 400 (675)
Q Consensus 323 e~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~--~~~~~~ 400 (675)
|.+.++++++||||||||+|++.+.++.. .....+..+++.+++..+.... ||+..|+++++....... ......
T Consensus 577 E~~hkv~tVvFDKTGTLT~G~~~V~~~~~--~~~~~~~~e~l~~v~a~Es~Se-HPig~AIv~yak~~~~~~~~~~~~~~ 653 (951)
T KOG0207|consen 577 EKAHKVKTVVFDKTGTLTEGKPTVVDFKS--LSNPISLKEALALVAAMESGSE-HPIGKAIVDYAKEKLVEPNPEGVLSF 653 (951)
T ss_pred HHHhcCCEEEEcCCCceecceEEEEEEEe--cCCcccHHHHHHHHHHHhcCCc-CchHHHHHHHHHhcccccCcccccee
Confidence 99999999999999999999999998764 3333667788888777766655 999999999986433111 111122
Q ss_pred EEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCC
Q 005830 401 HFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGA 480 (675)
Q Consensus 401 ~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~ 480 (675)
..+|-.. ....+. .+++. .+-|+-+++.+.-. ..++.+...+++....|..+.+++...
T Consensus 654 ~~~pg~g--~~~~~~---~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~----------- 712 (951)
T KOG0207|consen 654 EYFPGEG--IYVTVT---VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG----------- 712 (951)
T ss_pred ecccCCC--cccceE---EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-----------
Confidence 2233222 221111 23433 67799998775322 234557777888889999999999988
Q ss_pred CcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHh
Q 005830 481 PWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELI 560 (675)
Q Consensus 481 ~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 560 (675)
+++|++.++|++|||+..+|+.||+.|++++|+||||..+|+++|+++|+.
T Consensus 713 --~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------------------------- 763 (951)
T KOG0207|consen 713 --QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--------------------------- 763 (951)
T ss_pred --EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc---------------------------
Confidence 999999999999999999999999999999999999999999999999974
Q ss_pred hhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHH
Q 005830 561 EKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 561 ~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 640 (675)
.|||.+.|+||.++|+.+|++++.|+|+|||.||+|||.+|||||+|+.|++.|.++||+||+.+++..++.+++++
T Consensus 764 ---~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LS 840 (951)
T KOG0207|consen 764 ---NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLS 840 (951)
T ss_pred ---eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 641 RAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 641 r~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
|++++++|.|+.|++.||+..+..+.+.++..|
T Consensus 841 rkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~ 873 (951)
T KOG0207|consen 841 RKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFG 873 (951)
T ss_pred HHHHhhHHHHHHHHHHHHHhhhhhheecccCCc
Confidence 999999999999999999987766655554444
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=9.6e-79 Score=673.26 Aligned_cols=475 Identities=36% Similarity=0.536 Sum_probs=416.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHh--cCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEee
Q 005830 106 VLLVINSTISFIEENNAGNAAAALMA--NLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQ 183 (675)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vde 183 (675)
++++++.+++.+++++..+..+.+.+ ..|.+++|+|+| +++|++++|+|||+|.+++||+|||||+|++| .+.|||
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g-~~~vde 81 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSG-SCFVDE 81 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEc-cEEEEc
Confidence 45667778888999999999999888 789999999999 99999999999999999999999999999999 789999
Q ss_pred ccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccCC-CCchHHHHHHHH-HHHHHHHHHHHH
Q 005830 184 SALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQ-VGHFQKVLTAIG-NFCICSIAVGIV 261 (675)
Q Consensus 184 s~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~i~~~~~ 261 (675)
|+|||||.|+.|.+|+.+++||.+.+|.+.+.|+++|.+|..+++..++.+... ++++++..+++. .+++++++++++
T Consensus 82 s~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~ 161 (499)
T TIGR01494 82 SNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIAL 161 (499)
T ss_pred ccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998877653 678899999988 554444433333
Q ss_pred HHHHHHHhcccc--chHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCcc
Q 005830 262 AEIIIMYPVQHR--KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL 339 (675)
Q Consensus 262 ~~~~~~~~~~~~--~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTL 339 (675)
+.++.++..... +|..++.+++++++++|||+||+++++++..+..+++++|+++|+++.+|+||++|++||||||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTL 241 (499)
T TIGR01494 162 AVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTL 241 (499)
T ss_pred HHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCcc
Confidence 333333222122 378899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEEEEEcC
Q 005830 340 TLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTALTYIDS 419 (675)
Q Consensus 340 T~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~ 419 (675)
|+|+|++.++.... . .....||++.++++++.. +.+...||++.+++|++++...
T Consensus 242 T~~~~~v~~~~~~~---~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~~ 296 (499)
T TIGR01494 242 TKNEMSFKKVSVLG---G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRGP 296 (499)
T ss_pred ccCceEEEEEEecC---C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEecC
Confidence 99999998876321 0 123449999999987642 1235679999998888887753
Q ss_pred CCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchH
Q 005830 420 DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSA 499 (675)
Q Consensus 420 ~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~ 499 (675)
++ .++||+++.+.+.|.. +.+..+++..+|+|++++|++. +++|++.++|++|++++
T Consensus 297 ~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~~ 353 (499)
T TIGR01494 297 DG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDAK 353 (499)
T ss_pred Cc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhHH
Confidence 33 4789999999988741 2334456788999999999987 89999999999999999
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHH
Q 005830 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (675)
Q Consensus 500 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 579 (675)
++|+.|+++|++++|+|||+..+|..+|+++|+ +++++|++|.++|+
T Consensus 354 ~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v~ 400 (499)
T TIGR01494 354 ETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALVE 400 (499)
T ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHHH
Confidence 999999999999999999999999999999996 78999999999999
Q ss_pred HHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 005830 580 RLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 659 (675)
Q Consensus 580 ~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~ 659 (675)
.+|+.|+.|+|+|||.||+|||++|||||+|+ ++++||++++++++..+..++.+||++++++++++.|++++|+
T Consensus 401 ~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~ 475 (499)
T TIGR01494 401 ALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNL 475 (499)
T ss_pred HHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997 6889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 005830 660 RIVVSVPNI 668 (675)
Q Consensus 660 ~~~~~~~~~ 668 (675)
..+..++++
T Consensus 476 ~~~~~a~~~ 484 (499)
T TIGR01494 476 ILIPLAALL 484 (499)
T ss_pred HHHHHHHHH
Confidence 876666543
No 26
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.4e-77 Score=667.50 Aligned_cols=496 Identities=26% Similarity=0.394 Sum_probs=422.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEEC-CeEEEEEcCCccCCcEEEecCCCeeeeeEEEEe
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLE 175 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~-g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~ 175 (675)
+|..+.+++++++++..++.+.++|+++.+++|++..|.+++++|+ |++++|+.++|+|||+|.|++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4556667778888888999999999999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHH
Q 005830 176 GDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCIC 254 (675)
Q Consensus 176 g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 254 (675)
| .+.||||+|||||.|+.|.+||.||+||.+.+|.+.++|+++|.+|.+|++.+++++++ +++++++..++++.+++.
T Consensus 133 g-~~~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 G-ESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred C-ceEEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 9 57999999999999999999999999999999999999999999999999999997764 678999999999998766
Q ss_pred HHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEec
Q 005830 255 SIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (675)
Q Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~D 334 (675)
.+++..++.+++ | ..++.+++++++++|||+|++++|+++..+..+++++||++|+++++|.|+++|++|||
T Consensus 212 ~v~~~a~~~~~~-~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITFVI-W-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHHHH-H-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 555544333222 2 24788999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEE
Q 005830 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (675)
Q Consensus 335 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv 414 (675)
||||||+|+|++.++.. ..+.+.++++.+++..+..++ ||++.|+++++.............+.+|. +....
T Consensus 284 KTGTLT~g~~~v~~i~~---~~~~~~~~~l~~aa~~e~~s~-HPia~Ai~~~~~~~~~~~~~~~~~~~~~g----~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHV---FGDRDRTELLALAAALEAGSE-HPLAKAIVSYAKEKGITLVEVSDFKAIPG----IGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEec---CCCCCHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCCcCCCCCeEEECC----ceEEE
Confidence 99999999999988653 224556788888887776665 99999999876422110011122222221 11111
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCC
Q 005830 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (675)
Q Consensus 415 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~l 494 (675)
..+| ..+..|+++.+.+... . +..+.++|.+++.++.+. +++|++.++|++
T Consensus 356 ---~~~g--~~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 ---TVEG--TKIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred ---EECC--EEEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 1245 3456799998654211 1 112346899999988766 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHH
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 574 (675)
||+++++|++|++.|++++|+|||+..++..+++++|+. +|++..|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999983 4888899999
Q ss_pred HHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005830 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (675)
Q Consensus 575 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 654 (675)
.++++.++++++.|+|+|||.||++|+++||+||++|++++.++++||+++.+++++.+.+++++||++++++++|+.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHh
Q 005830 655 VSITIRIVVSVPNIL 669 (675)
Q Consensus 655 ~~~n~~~~~~~~~~~ 669 (675)
+.||+..+..+++..
T Consensus 536 ~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 536 FGYNVIAIPIAAGVL 550 (562)
T ss_pred HHHHHHHHHHHHhhh
Confidence 999998766655433
No 27
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2e-77 Score=668.69 Aligned_cols=524 Identities=26% Similarity=0.363 Sum_probs=437.7
Q ss_pred HHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECC-eEEEEEcCCccCC
Q 005830 78 MEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDG-RWSEQDASILVPG 156 (675)
Q Consensus 78 ~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g-~~~~i~~~~L~~G 156 (675)
+.++++++++++ .|.++.+++++++++..++.++++|+++.++++.+..|+.++|+||| ++++|++++|+||
T Consensus 5 ~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~G 77 (556)
T TIGR01525 5 MALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVG 77 (556)
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCC
Confidence 344555556554 68889999999999999999999999999999999999999999995 9999999999999
Q ss_pred cEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc-
Q 005830 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 235 (675)
Q Consensus 157 Div~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~- 235 (675)
|+|.+++||.|||||+|++| .+.||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|+++|.+|++|++.+++.+.
T Consensus 78 Div~v~~G~~iP~Dg~vi~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 156 (556)
T TIGR01525 78 DIVIVRPGERIPVDGVVISG-ESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQ 156 (556)
T ss_pred CEEEECCCCEeccceEEEec-ceEEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHh
Confidence 99999999999999999999 5799999999999999999999999999999999999999999999999999988775
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcc
Q 005830 236 NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (675)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~ 315 (675)
.+++++++.+++++.+++++++++.++.+++++.. ... .++..++++++++|||+|++++++++..+..+++++|++
T Consensus 157 ~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~-~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gil 233 (556)
T TIGR01525 157 SSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL-GAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGIL 233 (556)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCce
Confidence 46789999999999887665555444444444332 222 788899999999999999999999999999999999999
Q ss_pred cccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCC--cHHHHHHHHHHccccCcChHHHHHHhhcCChHHH
Q 005830 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVE--KEHVILLAARASRTENQDAIDAAIVGMLADPKEA 393 (675)
Q Consensus 316 vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~ 393 (675)
+|+++++|.++++|++|||||||||+|+|++.++... .+.. .++++.+++..+.... ||++.|+++++......
T Consensus 234 vk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---~~~~~~~~~~l~~a~~~e~~~~-hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 234 IKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPL---DDASISEEELLALAAALEQSSS-HPLARAIVRYAKKRGLE 309 (556)
T ss_pred ecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEec---CCCCccHHHHHHHHHHHhccCC-ChHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999886531 1222 5677777776665554 99999999887432100
Q ss_pred hcCCc-EEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCC
Q 005830 394 RAGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE 472 (675)
Q Consensus 394 ~~~~~-~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~ 472 (675)
... . ....+| .+.... ..+|. ..+..|+++.+ +... .. .......++.+..+|+|+++++.+.
T Consensus 310 ~~~-~~~~~~~~----~~gi~~---~~~g~-~~~~lg~~~~~-~~~~--~~-~~~~~~~~~~~~~~g~~~~~v~~~~--- 373 (556)
T TIGR01525 310 LPK-QEDVEEVP----GKGVEA---TVDGQ-EEVRIGNPRLL-ELAA--EP-ISASPDLLNEGESQGKTVVFVAVDG--- 373 (556)
T ss_pred ccc-ccCeeEec----CCeEEE---EECCe-eEEEEecHHHH-hhcC--CC-chhhHHHHHHHhhCCcEEEEEEECC---
Confidence 000 1 111111 111111 12341 24557888876 2111 11 1223345667788999999999865
Q ss_pred cCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCcccccc
Q 005830 473 KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASI 551 (675)
Q Consensus 473 ~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~g-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~ 551 (675)
+++|.+.++|++||+++++|+.|+++| ++++|+|||+..++.++++++|+..
T Consensus 374 ----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~----------------- 426 (556)
T TIGR01525 374 ----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE----------------- 426 (556)
T ss_pred ----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-----------------
Confidence 899999999999999999999999999 9999999999999999999999952
Q ss_pred CcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChh
Q 005830 552 AALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 631 (675)
Q Consensus 552 ~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~ 631 (675)
+|+++.|++|.++++.++..++.|+|+|||.||++|+++||+|+++|++++.+++.||+++.+++++
T Consensus 427 -------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~ 493 (556)
T TIGR01525 427 -------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLS 493 (556)
T ss_pred -------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHH
Confidence 5899999999999999999999999999999999999999999999988999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCC
Q 005830 632 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSP 673 (675)
Q Consensus 632 ~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~ 673 (675)
.+.+++++||++++++++++.|++.+|+..+..++ +++..|
T Consensus 494 ~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~-~g~~~p 534 (556)
T TIGR01525 494 SLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA-GGLLPL 534 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCH
Confidence 99999999999999999999999999998864443 333334
No 28
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=8.8e-78 Score=667.11 Aligned_cols=508 Identities=30% Similarity=0.405 Sum_probs=432.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCC
Q 005830 77 VMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPG 156 (675)
Q Consensus 77 ~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~G 156 (675)
++.++++++++++ .|+++.+++++++++..++.++++|+.+.++++.+..|++++|+|||++++|++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 3455666666654 688888899999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc-
Q 005830 157 DVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 235 (675)
Q Consensus 157 Div~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~- 235 (675)
|+|.+++||+|||||+|++| .+.||||+|||||.|+.|.+|+.+|+||.+.+|.+.++|++||.+|.+|++.+++++.
T Consensus 77 Div~v~~G~~iP~Dg~ii~g-~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSG-TSTVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeC-cEEEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999999999999 6799999999999999999999999999999999999999999999999999988765
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcc
Q 005830 236 NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAI 315 (675)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~ 315 (675)
.+++++++.+++++.++++.++++.++.++++++.. .+..++.+++++++++|||+|++++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 467899999999998877666655554444444322 234478889999999999999999999999999999999999
Q ss_pred cccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhc
Q 005830 316 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARA 395 (675)
Q Consensus 316 vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~ 395 (675)
+|+++++|+++++|++|||||||||+|+|++.++.. .+++.+++..+... .||++.|+++++....
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---------~~~l~~a~~~e~~~-~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---------AEVLRLAAAAEQAS-SHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH---------HHHHHHHHHHhccC-CCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999987642 26777776655544 4999999998764321
Q ss_pred CCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCC
Q 005830 396 GVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTK 475 (675)
Q Consensus 396 ~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~ 475 (675)
.+...+.+|. + .+. ...+|+. +..|+++.+.+... ..+..+|.+++.++.+.
T Consensus 300 ~~~~~~~~~g----~--gi~-~~~~g~~--~~ig~~~~~~~~~~-------------~~~~~~~~~~~~v~~~~------ 351 (536)
T TIGR01512 300 NVESVEEVPG----E--GVR-AVVDGGE--VRIGNPRSLEAAVG-------------ARPESAGKTIVHVARDG------ 351 (536)
T ss_pred CCcceEEecC----C--eEE-EEECCeE--EEEcCHHHHhhcCC-------------cchhhCCCeEEEEEECC------
Confidence 2222222221 1 111 1124543 34688876543210 14556788888887654
Q ss_pred CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcc
Q 005830 476 ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAAL 554 (675)
Q Consensus 476 ~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~ 554 (675)
.++|.+.++|++||+++++|+.|+++|+ +++|+|||+..++..+++++|+..
T Consensus 352 -------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-------------------- 404 (536)
T TIGR01512 352 -------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-------------------- 404 (536)
T ss_pred -------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh--------------------
Confidence 8999999999999999999999999999 999999999999999999999952
Q ss_pred cHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcC-CccHHHHhccCEEecCCChhHH
Q 005830 555 PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 633 (675)
Q Consensus 555 ~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~-~~~~~a~~~ad~vl~~~~~~~i 633 (675)
+|++..|++|..+++.++..++.|+|+|||.||++|+++||+||++| ++++.++.+||+++.+++++.+
T Consensus 405 ----------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 405 ----------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ----------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 48889999999999999999999999999999999999999999999 7899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCCC
Q 005830 634 ISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSPY 674 (675)
Q Consensus 634 ~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~f 674 (675)
.+++.+||++++++++|+.|++.||+..+...+ +++..|+
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~-~G~~~p~ 514 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLILLAL-FGVLPLW 514 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhccHH
Confidence 999999999999999999999999987655443 3455553
No 29
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.5e-76 Score=690.31 Aligned_cols=507 Identities=24% Similarity=0.325 Sum_probs=434.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEec
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEG 176 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g 176 (675)
+|..+.++++++.++.+++...+.|+.+.+++|.+..|++++++|+|++++|+.++|+|||+|.|++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 44456788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc-CCCCchHHHHHHHHHHHHHH
Q 005830 177 DPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICS 255 (675)
Q Consensus 177 ~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 255 (675)
.+.||||+|||||.|+.|.+||.||+||.+.+|.+.++|+++|.+|.++++.++++++ ..++++++..++++.+++.+
T Consensus 365 -~~~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~ 443 (834)
T PRK10671 365 -EAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPV 443 (834)
T ss_pred -eEEEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999876 46788999999999887766
Q ss_pred HHHHHHHHHHHHHhccc-cchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEec
Q 005830 256 IAVGIVAEIIIMYPVQH-RKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSD 334 (675)
Q Consensus 256 i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~D 334 (675)
++++.++.+++|++... ..|..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+++++|++|||
T Consensus 444 v~~~a~~~~~~~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fD 523 (834)
T PRK10671 444 VVVIALVSAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFD 523 (834)
T ss_pred HHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEc
Confidence 65544444444443221 22566788899999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCccCcceEE
Q 005830 335 KTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPVDKRTAL 414 (675)
Q Consensus 335 KTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~~~k~~sv 414 (675)
||||||+|+|++.+... ..+.+.++++.+++..+.... ||++.|+++++.+.. ..... +|...... .+
T Consensus 524 KTGTLT~g~~~v~~~~~---~~~~~~~~~l~~a~~~e~~s~-hp~a~Ai~~~~~~~~--~~~~~-----~~~~~~g~-Gv 591 (834)
T PRK10671 524 KTGTLTEGKPQVVAVKT---FNGVDEAQALRLAAALEQGSS-HPLARAILDKAGDMT--LPQVN-----GFRTLRGL-GV 591 (834)
T ss_pred CCCccccCceEEEEEEc---cCCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHhhCC--CCCcc-----cceEecce-EE
Confidence 99999999999987642 224566778888877776655 999999988753210 01111 22221111 11
Q ss_pred EEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCC
Q 005830 415 TYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPP 494 (675)
Q Consensus 415 ~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~l 494 (675)
... .+|+ .+.+|+++.+.+.... .+.+...++.+.++|.++++++++. +++|++.+.|++
T Consensus 592 ~~~-~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~ 651 (834)
T PRK10671 592 SGE-AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPL 651 (834)
T ss_pred EEE-ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcc
Confidence 111 2453 4567999987542211 2345566777889999999999876 899999999999
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHH
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 574 (675)
||+++++|++|++.|++++|+|||+..++..+++++|+.. +|+++.|++|
T Consensus 652 r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------------------------~~~~~~p~~K 701 (834)
T PRK10671 652 RSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------------------------VIAGVLPDGK 701 (834)
T ss_pred hhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE------------------------------EEeCCCHHHH
Confidence 9999999999999999999999999999999999999952 6899999999
Q ss_pred HHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 005830 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 654 (675)
Q Consensus 575 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~ 654 (675)
.++++.++.+++.|+|+|||.||++|+++||+||+||++++.++++||++++++++++|..++++||+++++|++|+.|+
T Consensus 702 ~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a 781 (834)
T PRK10671 702 AEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGA 781 (834)
T ss_pred HHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHH
Q 005830 655 VSITIRIVVSVP 666 (675)
Q Consensus 655 ~~~n~~~~~~~~ 666 (675)
+.||+..+..++
T Consensus 782 ~~yn~~~i~~a~ 793 (834)
T PRK10671 782 FIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHH
Confidence 999998876665
No 30
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-77 Score=630.16 Aligned_cols=574 Identities=25% Similarity=0.309 Sum_probs=434.6
Q ss_pred cCHHHHHHHcCCCCCCCCH-HHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhh
Q 005830 22 IPIEEVFEQLKCSREGLTS-DEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQD 100 (675)
Q Consensus 22 ~~~~~~~~~l~~~~~GL~~-~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 100 (675)
.|.++.+..+.. .+|+.. .++..-.++||.|....+.+++...|.+....|| ++|++.++..|.+ +.+||+
T Consensus 148 fp~~~~~g~~~k-~~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCL------DeyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQK-STGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCL------DEYWYY 219 (1160)
T ss_pred cCcCCcchhhhh-ccCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHh------HHHHHH
Confidence 345554544444 357764 4455556679999999999999989999999999 5666666666665 468998
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecC---CCeeeeeEEEEecC
Q 005830 101 FVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKL---GDIVPADARLLEGD 177 (675)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~---G~~iPaD~~vl~g~ 177 (675)
.++-+++++....--..|+.++-...+. |...|..+.|+|+++|+.+.++||.|||+|.+.. ...||||.++++|
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~G- 297 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRG- 297 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEec-
Confidence 8887777666655555566555554444 4456788999999999999999999999999977 5679999999999
Q ss_pred CeeEeeccccCCCcccccCCC-----------------Cccccceeeee-------------ceEEEEEEEecchhhhhh
Q 005830 178 PLKIDQSALTGESLPVTKNPY-----------------DEVFSGSTCKQ-------------GEIEAVVIATGVHTFFGK 227 (675)
Q Consensus 178 ~~~Vdes~LTGEs~pv~K~~~-----------------~~v~aGt~v~~-------------g~~~~~V~~tG~~T~~g~ 227 (675)
+|.|||++|||||.|..|.+- .++|+||++++ |.+.+.|++||.+|..|+
T Consensus 298 sciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 298 SCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred ceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 789999999999999999762 36899999985 569999999999999999
Q ss_pred hhhhhhc-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------cchHHHHHHHHHHHHHhccCcchHHHHH
Q 005830 228 AAHLVDS-TNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQH------RKYRDGIDNLLVLLIGGIPIAMPTVLSV 300 (675)
Q Consensus 228 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ll~~~iP~~l~~~~~~ 300 (675)
+.+.+.- +++.+.-.. ..+ ++++.+++++++ ..+|.|.. .+-...++-+..++...+|+.||+-+++
T Consensus 378 LvRtilf~aervTaNn~--Etf--~FILFLlVFAia--Aa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSm 451 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNR--ETF--IFILFLLVFAIA--AAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSM 451 (1160)
T ss_pred eeeeEEecceeeeeccH--HHH--HHHHHHHHHHHH--hhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhH
Confidence 8876644 333332111 111 111112221222 22333221 2223345667777888999999999999
Q ss_pred HHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeeccc-------CCCcHHHHHHHHHHc--
Q 005830 301 TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAK-------GVEKEHVILLAARAS-- 371 (675)
Q Consensus 301 ~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~-------~~~~~~~l~~~~~~~-- 371 (675)
+...+...|+|.+++|..|-++.-.|+||+.|||||||||+..|.|..+--..... ....+.+..+|++.+
T Consensus 452 AVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv 531 (1160)
T KOG0209|consen 452 AVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLV 531 (1160)
T ss_pred HHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997754211110 112223333433322
Q ss_pred ---cccCcChHHHHHHhhcCChH----------HHhcCCcEEEEecCCccCcceEEEEEcC----CCcEEEEEcCcHHHH
Q 005830 372 ---RTENQDAIDAAIVGMLADPK----------EARAGVREVHFLPFNPVDKRTALTYIDS----DGNWHRASKGAPEQI 434 (675)
Q Consensus 372 ---~~~~~~~~~~ai~~~~~~~~----------~~~~~~~~~~~~~f~~~~k~~sv~~~~~----~g~~~~~~kGa~e~i 434 (675)
..-.+||+++|.++.+.-.- ......++++.+.|+|..|||+++.... +-+++..+|||||.|
T Consensus 532 ~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi 611 (1160)
T KOG0209|consen 532 LLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVI 611 (1160)
T ss_pred HhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHH
Confidence 12346999999988763111 1112467788999999999999887532 236889999999999
Q ss_pred HHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCC--------cCCCCCCCCcEEEEEecccCCCCcchHHHHHHHH
Q 005830 435 LALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPE--------KTKESPGAPWQLVGLLPLFDPPRHDSAETIRRAL 506 (675)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~--------~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~ 506 (675)
.++.. +.+..+++...+++++|.||++++||+++. -.+++.|++|+|.|++.|..|+|+|++++|+.|+
T Consensus 612 ~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~ 688 (1160)
T KOG0209|consen 612 QEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELN 688 (1160)
T ss_pred HHHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHh
Confidence 98875 567889999999999999999999999973 2478899999999999999999999999999999
Q ss_pred hCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCc--------------cC----------------CccccccCcc--
Q 005830 507 NLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL--------------LG----------------QDKDASIAAL-- 554 (675)
Q Consensus 507 ~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~--------------~~----------------~~~~~~~~~~-- 554 (675)
+++++++|+||||+.||.++|+++||.......-.. .+ ...+.++.+.
T Consensus 689 ~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l 768 (1160)
T KOG0209|consen 689 NSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSAL 768 (1160)
T ss_pred ccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHH
Confidence 999999999999999999999999996541110000 00 0001122222
Q ss_pred -------cHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCcc
Q 005830 555 -------PVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADAT 614 (675)
Q Consensus 555 -------~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~ 614 (675)
.+..++....||||+.|.||..++..+++.|+.++|||||.||++|||+||||||+-+++
T Consensus 769 ~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~ 835 (1160)
T KOG0209|consen 769 DHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNP 835 (1160)
T ss_pred HHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCC
Confidence 334455667899999999999999999999999999999999999999999999996443
No 31
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=2.1e-75 Score=662.47 Aligned_cols=618 Identities=19% Similarity=0.233 Sum_probs=481.9
Q ss_pred HHhhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHh
Q 005830 46 RLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (675)
Q Consensus 46 r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 121 (675)
+...|-.|.+.+.||+++ +++++||.++.|++|++.++++++. .. +...|...+++++++.++.+.+.+++++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~--~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS--PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc--ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 555999999999999875 7889999999999999999999986 22 3456677788888999999999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEECCe-EEEEEcCCccCCcEEEecCCCeeeeeEEEEecC----CeeEeeccccCCCcccccC
Q 005830 122 AGNAAAALMANLAPKTKVLRDGR-WSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVTKN 196 (675)
Q Consensus 122 ~~~~~~~l~~~~~~~~~V~r~g~-~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~----~~~Vdes~LTGEs~pv~K~ 196 (675)
+++...+++ ..+++|.|++. +++..|++|++||+|++..++.+|||.++++++ .|+|++++|+||++.+.|.
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 998887654 47888988543 899999999999999999999999999999653 4999999999999988774
Q ss_pred C-----------------------------------------------CCccccceeeeece-EEEEEEEecchhhhhhh
Q 005830 197 P-----------------------------------------------YDEVFSGSTCKQGE-IEAVVIATGVHTFFGKA 228 (675)
Q Consensus 197 ~-----------------------------------------------~~~v~aGt~v~~g~-~~~~V~~tG~~T~~g~~ 228 (675)
. .+.++.|+++.+.. +.+.|+.||++|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 3 13467788888765 89999999999987653
Q ss_pred hhhhhccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhcc---c--------c-----chHHHHHHHHHHHHHhc
Q 005830 229 AHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVAEIIIM--YPVQ---H--------R-----KYRDGIDNLLVLLIGGI 290 (675)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~---~--------~-----~~~~~~~~~~~ll~~~i 290 (675)
. -..+.+++.+++.++.....++++.+..+++..+.. |... . . .....+..++.++...+
T Consensus 262 ~--~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 S--GKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred c--CCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 2 223346778888888876654443333333222221 1110 0 0 11234566778888999
Q ss_pred cCcchHHHHHHHHHHHHHHhh----------cCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCc
Q 005830 291 PIAMPTVLSVTMAIGSHRLSQ----------QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK 360 (675)
Q Consensus 291 P~~l~~~~~~~~~~~~~~l~~----------~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~ 360 (675)
|.+|++.+.+....++..+.+ ....+|+.+..|+||+|++|++|||||||+|.|++.+|.+....++...
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 999999999999888744332 3678999999999999999999999999999999998877543322211
Q ss_pred H--------------------------------------------HHHHHHHHHc-------------cccCcChHHHHH
Q 005830 361 E--------------------------------------------HVILLAARAS-------------RTENQDAIDAAI 383 (675)
Q Consensus 361 ~--------------------------------------------~~l~~~~~~~-------------~~~~~~~~~~ai 383 (675)
. +.....+.+. .....+|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 0 1111111111 011236777777
Q ss_pred HhhcCCh----------------HHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhcc-CChHHHH
Q 005830 384 VGMLADP----------------KEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN-CREDVRK 446 (675)
Q Consensus 384 ~~~~~~~----------------~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~-~~~~~~~ 446 (675)
+..+.+. ......|+.++.++|+|.||||||+++.++|+..+|||||+..|.+++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 7654321 0113478899999999999999999999999999999999999999998 4556778
Q ss_pred HHHHHHHHHHHcCCeEEEEEeeccCCcCC-------------------------CCCCCCcEEEEEecccCCCCcchHHH
Q 005830 447 KVHAVIDKFAERGLRSLGVARQEIPEKTK-------------------------ESPGAPWQLVGLLPLFDPPRHDSAET 501 (675)
Q Consensus 447 ~~~~~~~~~~~~G~r~l~~a~~~~~~~~~-------------------------~~~e~~l~~lG~i~~~d~lr~~~~~~ 501 (675)
+..+++++|+.+|+|++++|||.++++++ +.+|+||+++|.+++||+|+++++++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 88899999999999999999999987652 35799999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCc-----------------------------------
Q 005830 502 IRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQD----------------------------------- 546 (675)
Q Consensus 502 i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~----------------------------------- 546 (675)
|+.|++||||+||+|||+.+||.++|..|++..+.+..-.+....
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 999999999999999999999999999999976533211110000
Q ss_pred -cccccCcccHH------------HHh--hhcCEEEecCHHHHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCccEEc
Q 005830 547 -KDASIAALPVD------------ELI--EKADGFAGVFPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 547 -~~~~~~~~~~~------------~~~--~~~~v~~r~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
...-.++..+. ++. .+..++||++|.||+.+|+..++. +.++++||||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 00001111111 111 134589999999999999999754 88999999999999999999999999
Q ss_pred C--CccHHHHhccCEEecCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCCC
Q 005830 611 A--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVVSVPNILQKSPY 674 (675)
Q Consensus 611 ~--~~~~~a~~~ad~vl~~~~~~~i~~~i-~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~~~~~~~f 674 (675)
+ +|.+++. +||+.+.. |.-+-+++ -+||..|.|+.+.+.|.++.|+.+++..|+|.++++|
T Consensus 820 sG~EGmQAvm-sSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gf 883 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGF 883 (1151)
T ss_pred ccchhhhhhh-cccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 5 6766666 99999955 65565554 5699999999999999999999999999999999987
No 32
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-74 Score=597.70 Aligned_cols=595 Identities=22% Similarity=0.277 Sum_probs=448.8
Q ss_pred HHHhhcCCCccCcccccHH----HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCC-CchhhHHHHHHHHHHHHHHHHHHH
Q 005830 45 HRLHVFGPNKLEEKKESKV----LKFLGFMWNPLSWVMEAAAIMAIALANGGGRD-PDWQDFVGIIVLLVINSTISFIEE 119 (675)
Q Consensus 45 ~r~~~~G~N~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~ 119 (675)
.++++|.+|.+...+|+++ ..+++||..++|++|+++++.+++.....+.. .+|.++.+++.+.++...++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999999988754 56788999999999999999988755433322 344444455555555545555554
Q ss_pred HhHHHHHHHHHhcCCCeEEE-EECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecC----CeeEeeccccCCCcccc
Q 005830 120 NNAGNAAAALMANLAPKTKV-LRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGD----PLKIDQSALTGESLPVT 194 (675)
Q Consensus 120 ~~~~~~~~~l~~~~~~~~~V-~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~----~~~Vdes~LTGEs~pv~ 194 (675)
+++.+ ..+ .....+ -|+|...+ |++++++||+|.+..+++||||.++++.+ +|.|.+-.|+||+..+.
T Consensus 154 ~~rd~---~~N---se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDR---ELN---SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhh---hhh---hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 44443 322 234444 46766544 99999999999999999999999999532 68999999999997665
Q ss_pred cCC-----------------------------------------------CCccccceeeeeceEEEEEEEecchhhhhh
Q 005830 195 KNP-----------------------------------------------YDEVFSGSTCKQGEIEAVVIATGVHTFFGK 227 (675)
Q Consensus 195 K~~-----------------------------------------------~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~ 227 (675)
|-| .|.++++|.+.+|.+.|+|++||.+|+.
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 532 2678999999999999999999999952
Q ss_pred hhhhhhcc---CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHH
Q 005830 228 AAHLVDST---NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAI 304 (675)
Q Consensus 228 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~ 304 (675)
.+..+ .+...++..+|.+.++++..++++.++ +...-..+..|...+.+++.++...+|++|-+.+.++...
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ 379 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIV 379 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhh
Confidence 23322 255667777888888765544443332 1222234578889999999999999999999999999999
Q ss_pred HHHHHhhc----CcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCc--------------------
Q 005830 305 GSHRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEK-------------------- 360 (675)
Q Consensus 305 ~~~~l~~~----~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~-------------------- 360 (675)
.++.+.++ |.++|+...-|+||++.++.+|||||||+|+|.+++++.....++.+.
T Consensus 380 ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~ 459 (1051)
T KOG0210|consen 380 YSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGK 459 (1051)
T ss_pred HhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCccccc
Confidence 98888775 678999999999999999999999999999999999876533222111
Q ss_pred ---------------HHHHHHHHHHcccc-----------CcChHHHHHHhhcCC-----------------hHHHhcCC
Q 005830 361 ---------------EHVILLAARASRTE-----------NQDAIDAAIVGMLAD-----------------PKEARAGV 397 (675)
Q Consensus 361 ---------------~~~l~~~~~~~~~~-----------~~~~~~~ai~~~~~~-----------------~~~~~~~~ 397 (675)
+.+..++.+....+ ..+|.+.|++++.+. +......|
T Consensus 460 ~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~y 539 (1051)
T KOG0210|consen 460 GALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNY 539 (1051)
T ss_pred ccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeE
Confidence 11222222211111 124555565554321 11123468
Q ss_pred cEEEEecCCccCcceEEEEEcC-CCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCC
Q 005830 398 REVHFLPFNPVDKRTALTYIDS-DGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKE 476 (675)
Q Consensus 398 ~~~~~~~f~~~~k~~sv~~~~~-~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~ 476 (675)
++++.+||+|+.|||++++++. .++...|.|||+..|....+ ..+++++...+|+++|+|++.+|.|.+++++++
T Consensus 540 qIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq----~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye 615 (1051)
T KOG0210|consen 540 QILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQ----YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYE 615 (1051)
T ss_pred EEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccc----cchhhhhhhhhhhhhcceEEEEEecccCHHHHH
Confidence 8999999999999999999986 68999999999999887665 347888889999999999999999999877521
Q ss_pred --------------------------CCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 005830 477 --------------------------SPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (675)
Q Consensus 477 --------------------------~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 530 (675)
.+|++|+++|+.+.||+++++++.+++.||+|||++||+|||+.+||..+|+..
T Consensus 616 ~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs 695 (1051)
T KOG0210|consen 616 AFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSS 695 (1051)
T ss_pred HHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhc
Confidence 468999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcc----------------CC-ccccccCcccHH-----------HHhh--hcCEEEecCHHHHHHHHHH
Q 005830 531 GMGTNMYPSSSLL----------------GQ-DKDASIAALPVD-----------ELIE--KADGFAGVFPEHKYEIVKR 580 (675)
Q Consensus 531 gi~~~~~~~~~~~----------------~~-~~~~~~~~~~~~-----------~~~~--~~~v~~r~~p~~K~~iv~~ 580 (675)
++.+.......+. .. ....-++++.++ ++.. ...++||++|+||+++++.
T Consensus 696 ~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~l 775 (1051)
T KOG0210|consen 696 RLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRL 775 (1051)
T ss_pred cceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHH
Confidence 9865432211110 00 000012233322 2221 2458999999999999999
Q ss_pred HHhC-CCEEEEECCCccCHHHHHhCCccEEc-C-CccHHHHhccCEEecCCChhHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 005830 581 LQER-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVLT-SRAIFQRMKNYTIYAVS 656 (675)
Q Consensus 581 l~~~-~~~v~~iGDg~ND~~al~~A~vgia~-~-~~~~~a~~~ad~vl~~~~~~~i~~~i~~-gr~~~~~i~~~i~~~~~ 656 (675)
+|+. |..|++||||.||+.|+++||+||++ | +|.++.. |||+.+. .|+.+-+++.+ ||..|++-.+.-+|.+-
T Consensus 776 lq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViH 852 (1051)
T KOG0210|consen 776 LQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIH 852 (1051)
T ss_pred HHHhhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHh
Confidence 9986 88999999999999999999999999 5 5666554 9999995 49999998876 99999999988887654
Q ss_pred HhHH
Q 005830 657 ITIR 660 (675)
Q Consensus 657 ~n~~ 660 (675)
...+
T Consensus 853 RGL~ 856 (1051)
T KOG0210|consen 853 RGLI 856 (1051)
T ss_pred hhHH
Confidence 4443
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-64 Score=508.82 Aligned_cols=521 Identities=25% Similarity=0.358 Sum_probs=400.1
Q ss_pred HHHhHHHHHHHHHHHHHHHHh----cCC--CCCCchhhH-HHHHHH-HHHHHHHHHHHHHhHHHHHHHHHhcC-CCeEEE
Q 005830 69 FMWNPLSWVMEAAAIMAIALA----NGG--GRDPDWQDF-VGIIVL-LVINSTISFIEENNAGNAAAALMANL-APKTKV 139 (675)
Q Consensus 69 ~~~~~~~~~~~~~~i~~~~~~----~~~--~~~~~~~~~-~~i~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~V 139 (675)
+.+||..|+.++.+++..++. ..+ +....|+.. ..++++ +++..+-+.+.|-|.+.+-+.|++.. ...+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 356888777666666665322 111 111122211 122222 23333344455545444444554422 335666
Q ss_pred EEC-CeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCC---CccccceeeeeceEEEE
Q 005830 140 LRD-GRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPY---DEVFSGSTCKQGEIEAV 215 (675)
Q Consensus 140 ~r~-g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~---~~v~aGt~v~~g~~~~~ 215 (675)
+++ |.++.+++.+|+.||+|.+++||.||+||.|++| ...||||.+||||.||.|++| +.|-.||++++..+..+
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG-~asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEee-eeecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 665 8999999999999999999999999999999999 679999999999999999999 77999999999999999
Q ss_pred EEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcc
Q 005830 216 VIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAM 294 (675)
Q Consensus 216 V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l 294 (675)
++....+|.+.|+..+++.++ +++|-+--++.+..-+.+ +++...+ .+..+..+...-...+...+.++++.+|-.+
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTl-iFL~~~~-Tl~p~a~y~~g~~~~i~~LiALlV~LIPTTI 265 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTL-IFLLAVA-TLYPFAIYSGGGAASVTVLVALLVCLIPTTI 265 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHH-HHHHHHH-hhhhHHHHcCCCCcCHHHHHHHHHHHhcccH
Confidence 999999999999999998774 455544333322211111 1111111 1111111110112345677889999999999
Q ss_pred hHHHHHHHHHHHHHHhhcCcccccchhhhhhcCceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHcccc
Q 005830 295 PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTE 374 (675)
Q Consensus 295 ~~~~~~~~~~~~~~l~~~~i~vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 374 (675)
.-.++..-..++.|+.+.|++.++++++|.+|.||++..|||||+|-|+-.-+++.. ..+.+.+++...+..++...
T Consensus 266 GgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p---~~gv~~~~la~aa~lsSl~D 342 (681)
T COG2216 266 GGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIP---VPGVSEEELADAAQLASLAD 342 (681)
T ss_pred HHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheec---CCCCCHHHHHHHHHHhhhcc
Confidence 999998888899999999999999999999999999999999999999877766552 45777888777776665444
Q ss_pred CcChHHHHHHhhcCChH-HHh-cCCc-EEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCCh-HHHHHHHH
Q 005830 375 NQDAIDAAIVGMLADPK-EAR-AGVR-EVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCNCRE-DVRKKVHA 450 (675)
Q Consensus 375 ~~~~~~~ai~~~~~~~~-~~~-~~~~-~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~-~~~~~~~~ 450 (675)
+.|..++++..+.... +.+ .... .....||+...+++.+-. .++ ..+.|||.+.+.+..+... ..++.++.
T Consensus 343 -eTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l~~ 417 (681)
T COG2216 343 -ETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDLDA 417 (681)
T ss_pred -CCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHHHH
Confidence 3787888877654221 111 1111 346789987665544322 223 5678999999998876433 37788999
Q ss_pred HHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 005830 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 530 (675)
..++-++.|-..++++... +++|++.++|-+|||.+|-+.+||+.||+.+|+||||+.||..+|++.
T Consensus 418 ~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA 484 (681)
T COG2216 418 AVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA 484 (681)
T ss_pred HHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh
Confidence 9999999999999999887 999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 531 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
|.+. ..++++|++|.++|+.-|.+|+.|+|+|||.||+|||.+||||+||
T Consensus 485 GVDd------------------------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM 534 (681)
T COG2216 485 GVDD------------------------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM 534 (681)
T ss_pred Cchh------------------------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh
Confidence 9863 4889999999999999999999999999999999999999999999
Q ss_pred CCccHHHHhccCEEecCCChhHHHHHHHHHHHH
Q 005830 611 ADATDAARSASDIVLTEPGLSVIISAVLTSRAI 643 (675)
Q Consensus 611 ~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~ 643 (675)
.+|+++||+++..|=+|+|...+.+.++.|+++
T Consensus 535 NsGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 535 NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred ccccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 999999999999999999999999999999974
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=2.4e-36 Score=301.70 Aligned_cols=220 Identities=36% Similarity=0.527 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCe-EEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEe-cCCeeE
Q 005830 104 IIVLLVINSTISFIEENNAGNAAAALMANLAPK-TKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLE-GDPLKI 181 (675)
Q Consensus 104 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~-g~~~~V 181 (675)
+++++++..++++++++++++..+++++..+++ ++|+|||+++++++++|+|||+|.|++||.+||||+|++ | .+.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g-~~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESG-SAYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESS-EEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceecc-cccc
Confidence 566778888899999999999999998888887 899999999999999999999999999999999999999 7 8999
Q ss_pred eeccccCCCcccccC-----CCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccC-CCCchHHHHHHHHHHHHHH
Q 005830 182 DQSALTGESLPVTKN-----PYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN-QVGHFQKVLTAIGNFCICS 255 (675)
Q Consensus 182 des~LTGEs~pv~K~-----~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 255 (675)
|||.+|||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|..+++.+.....+ +++++++.++++..++..+
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 9999999999999999999999999999999999887765 4588999999999887665
Q ss_pred HHHHHHHHHHHHHh-ccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHhhcCcccccchhhhh
Q 005830 256 IAVGIVAEIIIMYP-VQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEE 324 (675)
Q Consensus 256 i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~le~ 324 (675)
+++++++.+++++. ....+|...+..++++++++||++||+++++++..++.++.++|+++|+++++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 55544444433333 2567788899999999999999999999999999999999999999999999985
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=1.1e-25 Score=222.35 Aligned_cols=211 Identities=31% Similarity=0.398 Sum_probs=152.6
Q ss_pred ceEEEecCCCccccCceeeeeeeeeecccCCCcHHHHHHHHHHccccCcChHHHHHHhhcCChHHHhcCCcEEEEecCCc
Q 005830 328 MDVLCSDKTGTLTLNKLTVDRNLIEVFAKGVEKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREVHFLPFNP 407 (675)
Q Consensus 328 v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~~~~~~f~~ 407 (675)
|++||||||||||++++.+. . .+...++..+...+.... ||++.++..+....... ....... .
T Consensus 1 i~~i~fDktGTLt~~~~~v~------~---~~~~~~~~~~~~~~~~s~-~p~~~~~~~~~~~~~~~-~~~~~~~-----~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA------P---PSNEAALAIAAALEQGSE-HPIGKAIVEFAKNHQWS-KSLESFS-----E 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE------S---CSHHHHHHHHHHHHCTST-SHHHHHHHHHHHHHHHH-SCCEEEE-----E
T ss_pred CeEEEEecCCCcccCeEEEE------e---ccHHHHHHHHHHhhhcCC-Ccchhhhhhhhhhccch-hhhhhhe-----e
Confidence 68999999999999999991 1 455666666665555554 99999998876543222 1111111 1
Q ss_pred cCcceEEEEEcCCCcEEEEEcCcHHHHHHhccCChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEE
Q 005830 408 VDKRTALTYIDSDGNWHRASKGAPEQILALCNCREDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGL 487 (675)
Q Consensus 408 ~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~ 487 (675)
...++..... ++. +. |+++.+.+..... .............|.+.+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1112111111 122 22 8888876644311 1111222223455656666664 3489999
Q ss_pred ecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE
Q 005830 488 LPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA 567 (675)
Q Consensus 488 i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 567 (675)
+.+.|++|++++++|+.|+++|++++|+|||+..++.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 23799
Q ss_pred ec--CHHHH--HHHHHHHHhCCCEEEEECCCccCHHHHHhCC
Q 005830 568 GV--FPEHK--YEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (675)
Q Consensus 568 r~--~p~~K--~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~ 605 (675)
++ +|++| .++++.++.+++.|+|+|||.||++|+++||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999977779999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.64 E-value=1.7e-15 Score=127.93 Aligned_cols=124 Identities=25% Similarity=0.383 Sum_probs=109.8
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhh
Q 005830 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (675)
Q Consensus 483 ~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (675)
...+.++---++=++++++|++|++. +++++.|||..-+....|+-.||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 56788888889999999999999999 99999999999999999999998643
Q ss_pred cCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc-C--CccHHHHhccCEEecCCChhHHHHHH
Q 005830 563 ADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 563 ~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~-~--~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
++|+...|+.|..+++.|+++++.|.|+|||.||.+||++||+||.. + +.++.+..+||+++- +...+++++
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik--~i~e~ldl~ 146 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK--EIAEILDLL 146 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh--hHHHHHHHh
Confidence 57999999999999999999999999999999999999999999987 4 567778899999984 455555543
No 37
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.38 E-value=1e-12 Score=103.80 Aligned_cols=67 Identities=36% Similarity=0.534 Sum_probs=61.0
Q ss_pred ccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcc-cccHHHHHHHHHHhHHHHHHHHHHHHH
Q 005830 19 LERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEK-KESKVLKFLGFMWNPLSWVMEAAAIMA 85 (675)
Q Consensus 19 ~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~ 85 (675)
||.++.+++++.|+++ .+||+++|+.+|+++||+|.++.+ ++++|..|+++|.+|+.+++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7999999999999977 899999999999999999999655 578889999999999999999988875
No 38
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.08 E-value=6.2e-10 Score=115.27 Aligned_cols=131 Identities=18% Similarity=0.248 Sum_probs=98.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE-ecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA-GVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-r~~p 571 (675)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+.-.+..+... + .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~lt----g----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLT----G----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEE----e----------EecCccCCc
Confidence 47899999999999999999999999988888999999985321100000000000 0 0000 0224
Q ss_pred HHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+.|.+.++.+.++ ...|+++|||.||.+|++.|++|||+ ++.+..++.||.++...++.++..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 6788888777654 35799999999999999999999999 888999999999999999999887763
No 39
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.05 E-value=1.2e-09 Score=109.07 Aligned_cols=153 Identities=24% Similarity=0.305 Sum_probs=105.7
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-CCCCcc-----CCc------------
Q 005830 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL-----GQD------------ 546 (675)
Q Consensus 486 G~i~~~d~-lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~-----~~~------------ 546 (675)
|.+.-.|. +.+.+.++|+++++.|++++++||++...+..+++.+|+..... .+.... +..
T Consensus 12 GTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~ 91 (230)
T PRK01158 12 GTITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKA 91 (230)
T ss_pred CCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHH
Confidence 44444444 78899999999999999999999999999999999999853221 111000 000
Q ss_pred -----------------cccc--------cCc---ccHHHHhhhcC--E-------EEecCHH--HHHHHHHHHHhC---
Q 005830 547 -----------------KDAS--------IAA---LPVDELIEKAD--G-------FAGVFPE--HKYEIVKRLQER--- 584 (675)
Q Consensus 547 -----------------~~~~--------~~~---~~~~~~~~~~~--v-------~~r~~p~--~K~~iv~~l~~~--- 584 (675)
.... ... ..+...+++.. + +....|. .|..-++.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i 171 (230)
T PRK01158 92 YSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGI 171 (230)
T ss_pred HHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCC
Confidence 0000 000 11122222111 1 1233333 377777766553
Q ss_pred -CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 585 -KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 585 -~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
...++++||+.||.+|++.|++|+||+|+.+.+|+.||+++.+++-+++.++|+
T Consensus 172 ~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 172 DPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 346999999999999999999999999999999999999999999999998875
No 40
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.05 E-value=1.7e-09 Score=104.82 Aligned_cols=131 Identities=15% Similarity=0.129 Sum_probs=97.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+++|++.+.|+.+++.| ++.++||.....+..+++++|+.........+.... ..++. ....++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g---~~tG~------------~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD---RVVGY------------QLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCC---eeECe------------eecCcc
Confidence 57999999999999975 999999999999999999999964221110000000 00000 013477
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 640 (675)
.|...++.+++.+..+.++|||.||.+|++.||+||++.......+.+-|+-.. .+.+.+...+.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 899999999888888999999999999999999999998555555544455444 4688888888765
No 41
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.03 E-value=6.7e-10 Score=86.39 Aligned_cols=59 Identities=42% Similarity=0.713 Sum_probs=53.3
Q ss_pred HcCCC-CCCCCHHHHHHHHhhcCCCccCccc-ccHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 005830 30 QLKCS-REGLTSDEGAHRLHVFGPNKLEEKK-ESKVLKFLGFMWNPLSWVMEAAAIMAIAL 88 (675)
Q Consensus 30 ~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 88 (675)
.|+++ ..|||++|+.+|+++||+|+++.++ .++|..++++|++|+.+++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 46777 5599999999999999999999886 77889999999999999999999999875
No 42
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.02 E-value=2.7e-09 Score=108.86 Aligned_cols=154 Identities=21% Similarity=0.221 Sum_probs=108.3
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCC-CCCc---------------------
Q 005830 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-SSSL--------------------- 542 (675)
Q Consensus 486 G~i~~~d~-lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-~~~~--------------------- 542 (675)
|.+.-.+. +.+.++++|+++++.|++++++||++...+..+.+++|+...... +...
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 44444444 899999999999999999999999999999999999999641110 0000
Q ss_pred --------------cC-C-------c---c-------------------------ccccCcccHHHHh---hh-----cC
Q 005830 543 --------------LG-Q-------D---K-------------------------DASIAALPVDELI---EK-----AD 564 (675)
Q Consensus 543 --------------~~-~-------~---~-------------------------~~~~~~~~~~~~~---~~-----~~ 564 (675)
.. . . . ......+...+.. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 00 0 0 0 0000001111111 11 11
Q ss_pred EE-------EecCH--HHHHHHHHHHHhC-CC---EEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChh
Q 005830 565 GF-------AGVFP--EHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 631 (675)
Q Consensus 565 v~-------~r~~p--~~K~~iv~~l~~~-~~---~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~ 631 (675)
.+ ...+| .+|...++.+.+. |- .|+++||+.||.+||+.|+.||||+|+.+.+++.||++...++-+
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 23333 3788888887763 43 499999999999999999999999999999999999998999999
Q ss_pred HHHHHHHH
Q 005830 632 VIISAVLT 639 (675)
Q Consensus 632 ~i~~~i~~ 639 (675)
++.++|+.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99998864
No 43
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.02 E-value=2.1e-09 Score=110.05 Aligned_cols=66 Identities=23% Similarity=0.225 Sum_probs=57.6
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+|..-++.+.+. ...|+++|||.||.+||+.|++|+||+|+.+.+|+.||+|+.+++-+++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566666666543 356999999999999999999999999999999999999999999999998885
No 44
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.02 E-value=1.2e-09 Score=107.63 Aligned_cols=144 Identities=20% Similarity=0.269 Sum_probs=100.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-CCCCcc-C--Cc------ccc-------------
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL-G--QD------KDA------------- 549 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~-~--~~------~~~------------- 549 (675)
++.+.+.++|++|++.|++++++||++...+..+++.+++..... .+..+. . .. ...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488999999999999999999999999999999999999863211 111000 0 00 000
Q ss_pred --------------ccCc---ccHHHHhhhcCE-------EEecC--HHHHHHHHHHHHhC----CCEEEEECCCccCHH
Q 005830 550 --------------SIAA---LPVDELIEKADG-------FAGVF--PEHKYEIVKRLQER----KHICGMTGDGVNDAP 599 (675)
Q Consensus 550 --------------~~~~---~~~~~~~~~~~v-------~~r~~--p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~ 599 (675)
.... ..+...+....+ +..++ ..+|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000 011111221111 11222 34788888777653 335999999999999
Q ss_pred HHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHH
Q 005830 600 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 600 al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
|++.|+.|++|+++.+.+++.||+++.+++-+++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999988888887765
No 45
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.01 E-value=1.2e-09 Score=111.90 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=100.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-CCCCcc----------------------------
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL---------------------------- 543 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~---------------------------- 543 (675)
.+.+.++++|+++++.|+++++.||++...+..+.+++|+..... .+....
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588999999999999999999999999999999999999853211 000000
Q ss_pred --------CC-------ccc-----------------ccc------------CcccHHH---Hhhh-----cCE------
Q 005830 544 --------GQ-------DKD-----------------ASI------------AALPVDE---LIEK-----ADG------ 565 (675)
Q Consensus 544 --------~~-------~~~-----------------~~~------------~~~~~~~---~~~~-----~~v------ 565 (675)
.. ... ... ..+.+++ .+.+ ..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00 000 000 0000011 0100 001
Q ss_pred EEecCHH--HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCE--EecCCChhHHHHHH
Q 005830 566 FAGVFPE--HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAV 637 (675)
Q Consensus 566 ~~r~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~--vl~~~~~~~i~~~i 637 (675)
+..++|. .|..-++.+.+. ...|+++|||.||.+||+.|+.||||+|+.+.+|++||+ ++.+++-+++.++|
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 1123333 577777777654 346999999999999999999999999999999999986 77788899999888
Q ss_pred H
Q 005830 638 L 638 (675)
Q Consensus 638 ~ 638 (675)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 5
No 46
>PRK10976 putative hydrolase; Provisional
Probab=98.98 E-value=2.3e-09 Score=109.46 Aligned_cols=66 Identities=20% Similarity=0.222 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccC--EEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad--~vl~~~~~~~i~~~i~ 638 (675)
.|..-++.+.+. ...|+++||+.||.+||+.|+.|+||+|+.+.+|+.|| .|+.+++-+++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 476666666543 24699999999999999999999999999999999987 7888888999988875
No 47
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.94 E-value=4.6e-09 Score=98.22 Aligned_cols=104 Identities=18% Similarity=0.214 Sum_probs=84.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe--cCHHHHHHH
Q 005830 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--VFPEHKYEI 577 (675)
Q Consensus 500 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~~p~~K~~i 577 (675)
.+|+.|+++|+++.++|+.+...+....+.+|+... |.. -.|+-...+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 579999999999999999999999999999998531 111 234555555
Q ss_pred HHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHH
Q 005830 578 VKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 633 (675)
Q Consensus 578 v~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i 633 (675)
++.+.-....|+++||+.||.+|++.|+++++|+++.+.++..|++|+..++-.+.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 56555445679999999999999999999999999999999999999876554443
No 48
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.92 E-value=5.8e-09 Score=103.64 Aligned_cols=146 Identities=23% Similarity=0.288 Sum_probs=100.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-CCCCc--------------cCCc-----------
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSL--------------LGQD----------- 546 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~~~--------------~~~~----------- 546 (675)
.+.+.+.++|+++++.|++++++||++...+..+.+.+|+..... .+... ....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999643211 00000 0000
Q ss_pred -cc-------------c---ccCcccHHHHhhhcC---------EEEecCH--HHHHHHHHHHHhC----CCEEEEECCC
Q 005830 547 -KD-------------A---SIAALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQER----KHICGMTGDG 594 (675)
Q Consensus 547 -~~-------------~---~~~~~~~~~~~~~~~---------v~~r~~p--~~K~~iv~~l~~~----~~~v~~iGDg 594 (675)
.. . ....+.+..+++... .+....| .+|..-++.+.+. ...|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0 000011111222111 1122333 3787777777653 3569999999
Q ss_pred ccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhH----HHHHHH
Q 005830 595 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV----IISAVL 638 (675)
Q Consensus 595 ~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~----i~~~i~ 638 (675)
.||.+|++.|++|+||+|+.+.+|+.||+|..+++-.+ +.+.|+
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998888888 665553
No 49
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.90 E-value=7.7e-09 Score=95.96 Aligned_cols=107 Identities=25% Similarity=0.321 Sum_probs=82.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe--cCHHHHHHHH
Q 005830 501 TIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--VFPEHKYEIV 578 (675)
Q Consensus 501 ~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--~~p~~K~~iv 578 (675)
+|++|++.|+++.++||++...+..+.+.+|+... |.. ..|+-...++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------------------------------~~~~~~k~~~~~~~~ 85 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------------------------------YQGQSNKLIAFSDIL 85 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------------------------------EecccchHHHHHHHH
Confidence 89999999999999999999999999999998532 111 1122223333
Q ss_pred HHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhH-HHHHH
Q 005830 579 KRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV-IISAV 637 (675)
Q Consensus 579 ~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~-i~~~i 637 (675)
+.+.-....++|+||+.||.+|++.|++++++.++.+..+..||+++..+.-.+ +.+++
T Consensus 86 ~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 86 EKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 333323467999999999999999999999999888899999999998665333 44443
No 50
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.87 E-value=1.1e-08 Score=101.16 Aligned_cols=129 Identities=20% Similarity=0.233 Sum_probs=92.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe-cCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~~p 571 (675)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.......-........ . .+... ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~----~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT----G----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE----E----------EecCcccCC
Confidence 57999999999999999999999999999999999999986421000000000000 0 00001 112
Q ss_pred HHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHH
Q 005830 572 EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 572 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
..|..+++.+.++ ...++++||+.+|.+|++.|+++++++ +.+..+++||+++.++++..+..+
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 3366666655443 246899999999999999999999985 567888899999999998887654
No 51
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.86 E-value=6.2e-09 Score=105.01 Aligned_cols=147 Identities=18% Similarity=0.200 Sum_probs=101.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCC-CCCCcc--------------------------
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-PSSSLL-------------------------- 543 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~-~~~~~~-------------------------- 543 (675)
...+.+.+.++|++++++|+++++.||++...+..+..++++..... .+....
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 34577999999999999999999999999999999999999862111 000000
Q ss_pred ----------------CCc---cc-----------------------------cccCcccHHHH-------hhhcCEEE-
Q 005830 544 ----------------GQD---KD-----------------------------ASIAALPVDEL-------IEKADGFA- 567 (675)
Q Consensus 544 ----------------~~~---~~-----------------------------~~~~~~~~~~~-------~~~~~v~~- 567 (675)
... .. ...+.+.++.+ ......+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 000 00 00000111111 11110111
Q ss_pred ------ecCH--HHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHH
Q 005830 568 ------GVFP--EHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIIS 635 (675)
Q Consensus 568 ------r~~p--~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~ 635 (675)
.++| ..|..-++.+.+. ...++++||+.||.+||+.|+.|+||+++++..+..||+++...+-.++.+
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 2333 4788888777652 457999999999999999999999999999999999999999877788887
Q ss_pred HH
Q 005830 636 AV 637 (675)
Q Consensus 636 ~i 637 (675)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 65
No 52
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.83 E-value=1.6e-08 Score=103.54 Aligned_cols=66 Identities=24% Similarity=0.343 Sum_probs=56.3
Q ss_pred HHHHHHHHHHhC-C---CEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~-~---~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
.|...++.+.+. | ..|+++||+.||.+|++.|++|++|+++.+..++.||+++.+++-+++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 466656555433 3 46999999999999999999999999999999999999999999999998885
No 53
>PLN02887 hydrolase family protein
Probab=98.82 E-value=1.4e-08 Score=112.61 Aligned_cols=66 Identities=23% Similarity=0.311 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhC-C---CEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~-~---~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+|..-++.+.+. | ..|+++|||.||.+||+.|+.||||+||.+.+|+.||+|+.+++-+++.++|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 344444444433 2 36999999999999999999999999999999999999999999999998885
No 54
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.79 E-value=2.8e-08 Score=96.84 Aligned_cols=119 Identities=19% Similarity=0.181 Sum_probs=86.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe-cC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~~ 570 (675)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+............+.. .-.+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~l--------------tG~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKL--------------TGRVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEE--------------eceeeeeecC
Confidence 57899999999999999999999999999999999999999753222111110000 0012333 34
Q ss_pred HHHHHHHHHHHHhC-CC---EEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEe
Q 005830 571 PEHKYEIVKRLQER-KH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 625 (675)
Q Consensus 571 p~~K~~iv~~l~~~-~~---~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl 625 (675)
.+.|...++.+.+. |. .+.++|||.||.|||+.|+.++++..... .+..|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~-l~~~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK-LRALADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH-HHHHHHHhc
Confidence 57888888666553 44 59999999999999999999999975433 344555544
No 55
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.75 E-value=2.1e-08 Score=83.65 Aligned_cols=64 Identities=33% Similarity=0.484 Sum_probs=52.8
Q ss_pred CcChHHHHHHhhcC------ChHHHhcCCcEEEEecCCccCcceEEEEEcCCCcEEEEEcCcHHHHHHhcc
Q 005830 375 NQDAIDAAIVGMLA------DPKEARAGVREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQILALCN 439 (675)
Q Consensus 375 ~~~~~~~ai~~~~~------~~~~~~~~~~~~~~~~f~~~~k~~sv~~~~~~g~~~~~~kGa~e~i~~~~~ 439 (675)
.++|.+.|++.++. +....+..+++++.+||+|.+|+|+++++ .++.+.+++|||||.|+++|+
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcC
Confidence 34788888887663 23456778999999999999999999998 334577799999999999997
No 56
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.73 E-value=4.5e-08 Score=86.64 Aligned_cols=116 Identities=22% Similarity=0.348 Sum_probs=92.3
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHH
Q 005830 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (675)
Q Consensus 500 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 579 (675)
-.|+.|+++|+++-++||++...+..-|+++||..- -.--.+|....+
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~--------------------------------~qG~~dK~~a~~ 89 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL--------------------------------YQGISDKLAAFE 89 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee--------------------------------eechHhHHHHHH
Confidence 478999999999999999999999999999999531 112356777666
Q ss_pred HHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCC----hhHHHHHHHHHHHHHHHH
Q 005830 580 RLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQRM 647 (675)
Q Consensus 580 ~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gr~~~~~i 647 (675)
.|.++ ...|+++||..||.|+|+..++++|+.++.+..++.||+|+.... ...+.++|..++..++-.
T Consensus 90 ~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~ 165 (170)
T COG1778 90 ELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEA 165 (170)
T ss_pred HHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHH
Confidence 66543 457999999999999999999999999999999999999997654 344455666565554443
No 57
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.69 E-value=7.2e-08 Score=92.21 Aligned_cols=111 Identities=23% Similarity=0.321 Sum_probs=83.5
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHH
Q 005830 500 ETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVK 579 (675)
Q Consensus 500 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 579 (675)
.+|+.|++.|+++.++||.+...+..+++++|+... |. ..+.|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~--g~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQ--GQSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ec--CCCcHHHHHH
Confidence 689999999999999999999999999999998531 11 1123444443
Q ss_pred HH-Hh---CCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCC----hhHHHHHHHHHHH
Q 005830 580 RL-QE---RKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRA 642 (675)
Q Consensus 580 ~l-~~---~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~----~~~i~~~i~~gr~ 642 (675)
.+ ++ ....|+|+||+.||.+|++.|+++++++++.+..+..||+++..+. ...+.+.+...|-
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 33 22 2457999999999999999999999998888888889999996443 3444555544443
No 58
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.68 E-value=2.9e-05 Score=83.47 Aligned_cols=186 Identities=18% Similarity=0.229 Sum_probs=125.6
Q ss_pred cEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-----------CCCCCCc-------c
Q 005830 482 WQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN-----------MYPSSSL-------L 543 (675)
Q Consensus 482 l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-----------~~~~~~~-------~ 543 (675)
-.|.|++....+.+++....|+.|-++-|+.+-.|-.+....+-.|.++||... ..|.... .
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 468999999999999999999999999999999999999999999999998531 1111100 0
Q ss_pred C---------------Ccccc---------------ccC--------cccHHHH----------hh-------hcCEEEe
Q 005830 544 G---------------QDKDA---------------SIA--------ALPVDEL----------IE-------KADGFAG 568 (675)
Q Consensus 544 ~---------------~~~~~---------------~~~--------~~~~~~~----------~~-------~~~v~~r 568 (675)
+ +.+-. .++ ......+ ++ -...|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 0 00000 000 0000000 00 1125889
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHH--HHHhCCccEEcCC--c-----------cHH-HHhccC----------
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAP--ALKKADIGIAVAD--A-----------TDA-ARSASD---------- 622 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~--al~~A~vgia~~~--~-----------~~~-a~~~ad---------- 622 (675)
++|+.-.++|+.+|+.|++|+.+|...|--. .+-+||++|++.. . +.. ..++.|
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 9999999999999999999999999988543 3457899998741 1 111 112233
Q ss_pred -------EEecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 005830 623 -------IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVVSVPN 667 (675)
Q Consensus 623 -------~vl~~~~~~~i~~~i~~gr~~~~~i~~~i~~~~~~n~~~~~~~~~ 667 (675)
+-+.....-.+..+|+-+|....-+|+.+.|.+.....+.+..+.
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~fl 1106 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFL 1106 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 222222344667888889999999999999988887666544433
No 59
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.68 E-value=2e-07 Score=94.60 Aligned_cols=66 Identities=20% Similarity=0.219 Sum_probs=53.1
Q ss_pred HHHHHHHHHHh----C--CCEEEEECCCccCHHHHHhCCccEEcCCcc---HHHHhc--c-CEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQE----R--KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~----~--~~~v~~iGDg~ND~~al~~A~vgia~~~~~---~~a~~~--a-d~vl~~~~~~~i~~~i~ 638 (675)
.|..-++.+.+ . ...++++||+.||.+|++.|+.||||+|+. +..|+. | ++|..+++-+++.++++
T Consensus 176 ~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 176 DKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 45555555543 2 457999999999999999999999999887 468876 4 58888899999998875
No 60
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.66 E-value=6.6e-08 Score=98.11 Aligned_cols=64 Identities=25% Similarity=0.287 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHH
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
.|..-++.+.+. ...++++||+.||.+|++.|+.|++|+++.+.+++.||+++.+++-+++.++
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 588778777664 3469999999999999999999999999999999999999998888888764
No 61
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.63 E-value=2.4e-07 Score=90.52 Aligned_cols=125 Identities=18% Similarity=0.159 Sum_probs=90.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE--ecC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA--GVF 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~~ 570 (675)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+.......-...... .+.. ...
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-----------------~i~~~~~~~ 129 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG-----------------MITGYDLRQ 129 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC-----------------eEECccccc
Confidence 4579999999999999 9999999999999999999999853211100000000 0000 123
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCE-EecCCChhHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 637 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~-vl~~~~~~~i~~~i 637 (675)
|..|...++.++..+..++|+|||.||.+|.++|++|+..+...+.....++. ++ +++..+.+.+
T Consensus 130 p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 130 PDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred cchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 67888899999888889999999999999999999999887544444445665 44 5577766554
No 62
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.61 E-value=4.2e-07 Score=92.97 Aligned_cols=66 Identities=21% Similarity=0.162 Sum_probs=51.8
Q ss_pred HHHHHHHHHHh-------CCCEEEEECCCccCHHHHHhCCccEEcCCcc-HH-----HHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQE-------RKHICGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~-------~~~~v~~iGDg~ND~~al~~A~vgia~~~~~-~~-----a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+|..-++.+.+ ....|+++||+.||.+||+.|++||||+++. +. .+..+|+++...+-+++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 56655555543 3457999999999999999999999998544 21 3457999999999999998875
No 63
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.48 E-value=5.9e-07 Score=87.40 Aligned_cols=117 Identities=25% Similarity=0.343 Sum_probs=81.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+++|++.+.++.|++.|+++.++|+.....+..+++.+|+..... ....... .... .-..+....|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~-~~~~~~~--~g~~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYS-NELVFDE--KGFI----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEE-EEEEEcC--CCeE----------ecceeeEEccc
Confidence 578999999999999999999999999999999999999753110 0000000 0000 00012223455
Q ss_pred HHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccC
Q 005830 573 HKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 622 (675)
Q Consensus 573 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad 622 (675)
.|...++.+.++ ...++++||+.||.+|++.||++++++.+....+.++|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 676666665443 34699999999999999999999999765555555555
No 64
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.47 E-value=1.7e-06 Score=88.64 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=54.1
Q ss_pred HHHHHHHHHHh----CC-CEEEEECCCccCHHHHHhCCccEEcCCccHHHH----hcc-CEEe--cCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQE----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~----~~-~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~----~~a-d~vl--~~~~~~~i~~~i~ 638 (675)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|+|+.+.+| .+| +.+. ..++-+++.++|+
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56666655543 35 789999999999999999999999999999988 666 6777 5667889888875
No 65
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.44 E-value=1.3e-06 Score=85.86 Aligned_cols=136 Identities=13% Similarity=0.057 Sum_probs=87.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCcc-CCccccccCcccHHHHhhhcCEE--Ee
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLL-GQDKDASIAALPVDELIEKADGF--AG 568 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~--~r 568 (675)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....+..+.... ++...... .....+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~---------p~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW---------PHPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC---------CCCCcccccc
Confidence 4689999999999999999999999999988888888775433221111111 11000000 000000 00
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHH--hccCEEecCCChhHHHHHHH
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~--~~ad~vl~~~~~~~i~~~i~ 638 (675)
.....|..+++.++..+..++|+|||.||.+|++.||+.++-+.-.+..+ ..+.+.. ++|..+...++
T Consensus 140 ~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 140 QCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 01246899999998888889999999999999999999887542112112 1222222 56777776654
No 66
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.42 E-value=3.4e-07 Score=83.88 Aligned_cols=102 Identities=24% Similarity=0.272 Sum_probs=75.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCc--------cCCccccccCcccHHHHhhhcC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSL--------LGQDKDASIAALPVDELIEKAD 564 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 564 (675)
.+-|++++.++.|++.|.+++++||.-...+..+|.++||+........+ .+.+...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~--------------- 152 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNE--------------- 152 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCC---------------
Confidence 46799999999999999999999999999999999999997522111111 1100000
Q ss_pred EEEecCHHHHHHHHHHHHhC--CCEEEEECCCccCHHHHHhCCccEEcC
Q 005830 565 GFAGVFPEHKYEIVKRLQER--KHICGMTGDGVNDAPALKKADIGIAVA 611 (675)
Q Consensus 565 v~~r~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A~vgia~~ 611 (675)
.-.....|.+++..+++. -..++|||||+||.+|+..||.=|+.+
T Consensus 153 --ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 153 --PTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred --ccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 001134789999988874 347999999999999999988777775
No 67
>PLN02954 phosphoserine phosphatase
Probab=98.34 E-value=4.9e-06 Score=82.52 Aligned_cols=126 Identities=20% Similarity=0.269 Sum_probs=83.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC-CCCCCCCccCCccccccCcccHHHHhhhcCEEEe---
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT-NMYPSSSLLGQDKDASIAALPVDELIEKADGFAG--- 568 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r--- 568 (675)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +........... ..+...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~----------------g~~~g~~~~ 147 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS----------------GEYAGFDEN 147 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC----------------CcEECccCC
Confidence 368999999999999999999999999999999999999863 111100000000 000000
Q ss_pred ---cCHHHHHHHHHHHHhC--CCEEEEECCCccCHHHHHh--CCccEEcCCc--cHHHHhccCEEecCCChhHHHHH
Q 005830 569 ---VFPEHKYEIVKRLQER--KHICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 569 ---~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~--A~vgia~~~~--~~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
..+..|...++.+.++ ...++++||+.||..|.++ ++++++.+.. .+.....+|+++ +++..+.+.
T Consensus 148 ~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~ 222 (224)
T PLN02954 148 EPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIEV 222 (224)
T ss_pred CcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHHh
Confidence 0123466777766554 3569999999999999888 4555655522 233455689998 457766654
No 68
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.28 E-value=9.7e-07 Score=85.19 Aligned_cols=92 Identities=24% Similarity=0.294 Sum_probs=68.8
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH---
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE--- 572 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~--- 572 (675)
+++.+.|+.++++|++++++||+....+..+++.+|+.............. +.....+.+|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~---------------~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNG---------------GGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTT---------------CCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecc---------------cceeeeeECCCCCC
Confidence 788899999999999999999999999999999999964211000000000 11234555544
Q ss_pred HHHHHHHHH------HhCCCEEEEECCCccCHHHHH
Q 005830 573 HKYEIVKRL------QERKHICGMTGDGVNDAPALK 602 (675)
Q Consensus 573 ~K~~iv~~l------~~~~~~v~~iGDg~ND~~al~ 602 (675)
.|...++.+ +.....++++|||.||.+|||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 499999999 445789999999999999996
No 69
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.23 E-value=9.7e-06 Score=80.10 Aligned_cols=127 Identities=18% Similarity=0.178 Sum_probs=94.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecC
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 570 (675)
...+-|++++++..|+++|++..++|+++...+..+.+..|+......... +.. .-..+-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g--~~~-----------------~~~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG--GDD-----------------VPPPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc--CCC-----------------CCCCCcC
Confidence 345779999999999999999999999999999999999999753211111 000 0122335
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCC---ccEEcCC--ccHHHHhccCEEecCCChhHHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~---vgia~~~--~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
|......++.+....+.++||||..+|..|-++|+ ||+..|. ........+|+++ +++..+...+.
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 77777777777666457999999999999999999 5666663 4556666799999 56777776553
No 70
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.20 E-value=7.2e-06 Score=81.00 Aligned_cols=132 Identities=12% Similarity=0.082 Sum_probs=83.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCC-CCCCC-CccCCccccccCcccHHHHhhhcCEE---E
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTN-MYPSS-SLLGQDKDASIAALPVDELIEKADGF---A 567 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~---~ 567 (675)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +... ...+. ...+....... ...... .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~k---------p~p~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITW---------PHPCDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEec---------cCCccccccc
Confidence 57999999999999999999999999998899988887 6431 10000 01110000000 000000 0
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHH--hccCEEecCCChhHHHHHH
Q 005830 568 GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~--~~ad~vl~~~~~~~i~~~i 637 (675)
++ ...|..+++.++..+..++|+|||.||.+|.++||+.++-+.-.+.++ ..+.+.+ ++|..+...+
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 00 124788889888777789999999999999999999777431112222 2244443 5677777665
No 71
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.17 E-value=1.6e-05 Score=78.81 Aligned_cols=127 Identities=17% Similarity=0.141 Sum_probs=89.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCE-EEecC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG-FAGVF 570 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~r~~ 570 (675)
.++.|++.+.++.|++.|+++.++||........+.+..|+..... .+.+.+ .+ ..+-.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~---~~~~~~-----------------~~~~~kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS---VVIGGD-----------------SLPNKKPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc---EEEcCC-----------------CCCCCCcC
Confidence 4578999999999999999999999999999999999999853211 000000 00 01122
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCC----ccHHHHhccCEEecCCChhHHHHHHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~----~~~~a~~~ad~vl~~~~~~~i~~~i~~g 640 (675)
|+--..+++.++.....++++||+.+|+.+.+.|++ +|.+.. ..+.....+|+++ +++..+...+.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 443345566665566789999999999999999999 555532 2334445788888 6788888877543
No 72
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.10 E-value=1.1e-05 Score=77.54 Aligned_cols=114 Identities=16% Similarity=0.083 Sum_probs=75.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe-cC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG-VF 570 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~~ 570 (675)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+...... +.+....... ...+.....+..++.. ..
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~---i~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE---IYSNPASFDN-DGRHIVWPHHCHGCCSCPC 146 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE---EeccCceECC-CCcEEEecCCCCccCcCCC
Confidence 36889999999999999999999999999999999999888532100 0000000000 0000000000000111 11
Q ss_pred HHHHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCccEE
Q 005830 571 PEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGIA 609 (675)
Q Consensus 571 p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgia 609 (675)
...|..+++.++.+ ...++++|||.||..|.++||+-.|
T Consensus 147 g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 23588999999887 8899999999999999999987654
No 73
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.10 E-value=7.2e-06 Score=77.96 Aligned_cols=100 Identities=22% Similarity=0.224 Sum_probs=69.4
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
++|++.+.++.+++.|++++++||.....+..+++.+|+.............. ...+.. ..-....+..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g---~~~g~~--------~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG---LLTGPI--------EGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC---EEeCcc--------CCcccCCcch
Confidence 58999999999999999999999999999999999999863211100000000 000000 0001244678
Q ss_pred HHHHHHHHHhC----CCEEEEECCCccCHHHHHhC
Q 005830 574 KYEIVKRLQER----KHICGMTGDGVNDAPALKKA 604 (675)
Q Consensus 574 K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A 604 (675)
|...++.++++ ...++++|||.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99888887654 34699999999999999875
No 74
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.06 E-value=2.6e-05 Score=76.21 Aligned_cols=124 Identities=15% Similarity=0.123 Sum_probs=85.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++||.+...+....+..|+...... .+.... ....+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~--i~~~~~-----------------~~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH--VIGSDE-----------------VPRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee--EEecCc-----------------CCCCCCChH
Confidence 6789999999999999999999999998888888888888532100 000000 001223344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEE-c--CC--ccHHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--AD--ATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia-~--~~--~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+++.++-....++||||+.+|+.+-++|++... + |. ..+..+..+|+++ +++..+..++
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 4455556565556779999999999999999999543 2 32 2344566799988 5677666543
No 75
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.03 E-value=1.8e-05 Score=77.05 Aligned_cols=109 Identities=16% Similarity=0.090 Sum_probs=76.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEE-Eec
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF-AGV 569 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~r~ 569 (675)
..++++++.+.++.+++.|++++++||.....+..+++.+|+...... ......+ ....++ +. ..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~-~l~~~~~--g~~~g~----------~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT-RLEESED--GIYTGN----------IDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec-ceEEcCC--CEEeCC----------ccCCCC
Confidence 346899999999999999999999999999999999999998532111 0000000 000000 00 113
Q ss_pred CHHHHHHHHHHHHh-CC---CEEEEECCCccCHHHHHhCCccEEcCC
Q 005830 570 FPEHKYEIVKRLQE-RK---HICGMTGDGVNDAPALKKADIGIAVAD 612 (675)
Q Consensus 570 ~p~~K~~iv~~l~~-~~---~~v~~iGDg~ND~~al~~A~vgia~~~ 612 (675)
.++.|...++.+.+ .+ ..++++||+.+|.+|++.|+.++++..
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 45678877766543 33 368999999999999999999998863
No 76
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.03 E-value=1.7e-05 Score=80.04 Aligned_cols=148 Identities=16% Similarity=0.125 Sum_probs=96.8
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC---CCCCCc--cCC--------------------
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM---YPSSSL--LGQ-------------------- 545 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~---~~~~~~--~~~-------------------- 545 (675)
..+..|...+.++++++.|+.++++||++......+.+++++..+. ..+... ..+
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3456789999999999999999999999999999999988875431 111100 000
Q ss_pred --------------c-ccc-------ccCccc----H---HHHhhhc--CE---EE-----ecCH--HHHHHHHHHHHhC
Q 005830 546 --------------D-KDA-------SIAALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVKRLQER 584 (675)
Q Consensus 546 --------------~-~~~-------~~~~~~----~---~~~~~~~--~v---~~-----r~~p--~~K~~iv~~l~~~ 584 (675)
. ... ...... + .+.+... .+ ++ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 000 000000 1 1111111 11 11 2333 4788888887653
Q ss_pred ----CCEEEEECCCccCHHHHHh-CCccEEcCCccHHHHhccC-------EEecCCChhHHHHHHH
Q 005830 585 ----KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 638 (675)
Q Consensus 585 ----~~~v~~iGDg~ND~~al~~-A~vgia~~~~~~~a~~~ad-------~vl~~~~~~~i~~~i~ 638 (675)
...|+++||+.||.+|++. ++.|++|+|+.+..++.++ ++.....-+++.++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3579999999999999998 6799999999988886543 5555556678877764
No 77
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.88 E-value=4.3e-05 Score=68.66 Aligned_cols=118 Identities=16% Similarity=0.071 Sum_probs=76.4
Q ss_pred cccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 489 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 489 ~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
....++.+++.+.++.|++.|++++++||.....+....+.+|+.... ...+........ ..............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYF--DPVITSNGAAIY-YPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhh--hheeccchhhhh-cccccccccccccccCC
Confidence 345588999999999999999999999999999999999999873210 000000000000 00000000011112335
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhC-CccEE
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA-DIGIA 609 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A-~vgia 609 (675)
-.|+.+..+.+.+......++++||+.+|+.|++.+ .-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 567777777777766667899999999999999984 44443
No 78
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.86 E-value=7.6e-05 Score=73.43 Aligned_cols=124 Identities=18% Similarity=0.133 Sum_probs=84.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.....+..+-+..|+...... +.+.+.. -..+..|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~---i~~~~~~----------------~~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV---VITLDDV----------------EHAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE---EEecCcC----------------CCCCCCcH
Confidence 3679999999999999999999999999999988899998532100 0000000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc---EEcCC-cc-HHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG---IAVAD-AT-DAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg---ia~~~-~~-~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
--..+++.+......+++|||+.+|..|-++|++- +..+. .. +.....+|+++ +++..+.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 44555555554556799999999999999999984 33332 22 23344688887 5688777655
No 79
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.86 E-value=8e-05 Score=73.69 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=38.9
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
.+..-+++.++|++|++.|++++++||++...+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556678999999999999999999999999999999999974
No 80
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.80 E-value=2.9e-05 Score=77.68 Aligned_cols=67 Identities=18% Similarity=0.203 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhC-C---CEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccC----EEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQER-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~-~---~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad----~vl~~~~~~~i~~~i~ 638 (675)
..|...++.+.++ | ..|+++||+.||.+|++.++.||+|+++.+..++.|| ++...++-.++.++|+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 3677777777653 2 3689999999999999999999999999999999999 8877778889988885
No 81
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.78 E-value=0.00011 Score=72.03 Aligned_cols=122 Identities=15% Similarity=0.135 Sum_probs=81.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+...... +.+.+.. -..+-.|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~---~~~~~~~----------------~~~Kp~p~ 145 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSV---LIGGDSL----------------AQRKPHPD 145 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcE---EEecCCC----------------CCCCCChH
Confidence 5789999999999999999999999999999999999998532110 0000000 01122233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEE-c--CCc--cHHHHhccCEEecCCChhHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA-V--ADA--TDAARSASDIVLTEPGLSVIIS 635 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia-~--~~~--~~~a~~~ad~vl~~~~~~~i~~ 635 (675)
-=..+.+.+......++++||+.+|+.+.++|++-.. + |.+ .+.....+|+++ +++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 146 PLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 3344455554445679999999999999999998543 3 322 123334688888 55666554
No 82
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.78 E-value=0.00014 Score=74.29 Aligned_cols=126 Identities=16% Similarity=0.161 Sum_probs=83.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.++.|++.++++.|++.|+++.++||.+...+..+.+..|+...... +.+.+.. -..+-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~---i~~~d~~----------------~~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRW---IIGGDTL----------------PQKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeE---EEecCCC----------------CCCCCCc
Confidence 46789999999999999999999999998888888888887431100 0000000 0011122
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEc--C-C-ccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV--A-D-ATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~--~-~-~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+--..+++.+.-....++|+||+.||+.+.+.|++ .+++ | + ..+.....+|+++ +++..+.+++.
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 22234444444345679999999999999999998 3444 3 1 2233445789998 56888876644
No 83
>PRK08238 hypothetical protein; Validated
Probab=97.77 E-value=0.00013 Score=79.85 Aligned_cols=101 Identities=16% Similarity=0.207 Sum_probs=73.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
|++|++.+.++++++.|++++++|+-+...+..+++.+|+-+.. .+.+. ..+..|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~V------igsd~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGV------FASDG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEE------EeCCC------------------ccccCCc
Confidence 47899999999999999999999999999999999999972211 11000 1134466
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 618 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~ 618 (675)
.|...++..... +.+.++||+.+|.++++.|+-.++++.+....+
T Consensus 128 ~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 675544432222 226789999999999999999999986554333
No 84
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.71 E-value=0.00031 Score=69.48 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=35.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
-+.++++|+.++++|++++++||++...+..+.+.+|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999975
No 85
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.66 E-value=0.0004 Score=70.59 Aligned_cols=140 Identities=12% Similarity=0.123 Sum_probs=86.4
Q ss_pred CCCcchHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHhCCC--C-C---CC-CCCC-----cc----------------
Q 005830 493 PPRHDSAETIRRALN-LGVNVKMITGDQLAIGKETGRRLGMG--T-N---MY-PSSS-----LL---------------- 543 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~-~gi~v~~~TGd~~~~a~~ia~~~gi~--~-~---~~-~~~~-----~~---------------- 543 (675)
.+-+++.++|+.|++ .|+.++++||++........+.+++. . + .. .... +.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 456899999999998 79999999999999988887766642 0 0 00 0000 00
Q ss_pred ---CCcccc----------ccC--cccHHHH----hhhcC--------EEEecCH--HHHHHHHHHHHhC----CCEEEE
Q 005830 544 ---GQDKDA----------SIA--ALPVDEL----IEKAD--------GFAGVFP--EHKYEIVKRLQER----KHICGM 590 (675)
Q Consensus 544 ---~~~~~~----------~~~--~~~~~~~----~~~~~--------v~~r~~p--~~K~~iv~~l~~~----~~~v~~ 590 (675)
+...+. ... .+.+..+ .+... .+..+.| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 000000 000 0111111 11111 1222333 3788777776543 357999
Q ss_pred ECCCccCHHHHHhC----CccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 591 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 591 iGDg~ND~~al~~A----~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+||+.||.+|++.+ +.||+||++. ..|++.+. +...+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCC--CHHHHHHHHH
Confidence 99999999999999 9999999764 45778874 5666666653
No 86
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.61 E-value=0.00025 Score=70.16 Aligned_cols=122 Identities=15% Similarity=0.154 Sum_probs=79.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
-++.|++.++++.|++.|+++.++|+........+.+..|+...... .+.+.. .-..+-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~-----------------~~~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA--LASAEK-----------------LPYSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE--EEEccc-----------------CCCCCCCH
Confidence 35789999999999999999999999999999999999998543210 000000 00112234
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc-CC---ccHHHHhccCEEecCCChhHHH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-AD---ATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~-~~---~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
+-=..+.+.+.-....++++||+.||+.+.+.|++.... .. ..+.-...+|+++ .++..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 322333333333346799999999999999999986544 22 2222233578877 4566554
No 87
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.60 E-value=0.00049 Score=69.57 Aligned_cols=97 Identities=15% Similarity=0.070 Sum_probs=67.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|++.|+++.++|+.....+..+-+..|+..... ...+.+... -..+-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~-d~ii~~~~~-----------------~~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP-DYNVTTDDV-----------------PAGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC-ceEEccccC-----------------CCCCCCHH
Confidence 457899999999999999999999999999998888888754311 001111000 01123344
Q ss_pred HHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vg 607 (675)
-=...++.+.-. ...++||||+.+|+.+-+.|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 444455555432 45699999999999999999973
No 88
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.59 E-value=0.00081 Score=68.54 Aligned_cols=121 Identities=14% Similarity=0.072 Sum_probs=81.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.+...+...-+..|+...... .+.+.. +. ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~--vi~~~~------------------~~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSV--VQAGTP------------------IL--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEE--EEecCC------------------CC--CCHH
Confidence 4679999999999999999999999999999999999998542110 000000 00 0122
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-Ec--CCccH--HHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--ADATD--AARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~--~~~~~--~a~~~ad~vl~~~~~~~i~~~i 637 (675)
-=..+++.+.-....++||||+.+|+.+-++|++-. ++ |..+. .....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 112233333333557999999999999999999853 23 32222 2344689988 6688877755
No 89
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.58 E-value=0.0005 Score=67.89 Aligned_cols=124 Identities=17% Similarity=0.177 Sum_probs=81.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC--CCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG--TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
.++.||+.+.++.|++.|+++.++|+-.......+.+..|+. ... ...+...+.. ..+-
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f--~~i~~~~~~~-----------------~~KP 146 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV--DAVVCPSDVA-----------------AGRP 146 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC--CEEEcCCcCC-----------------CCCC
Confidence 368899999999999999999999999999999999999975 211 1111110000 1122
Q ss_pred CHHHHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCccE--EcCCc--c--HHHHhccCEEecCCChhHHHHH
Q 005830 570 FPEHKYEIVKRLQER-KHICGMTGDGVNDAPALKKADIGI--AVADA--T--DAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 570 ~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~vgi--a~~~~--~--~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
.|+-=...++.+.-. ...++|+||+.+|+.+-++|++.. ++..+ + +.....+|+++ +++..+..+
T Consensus 147 ~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 147 APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 344333444444433 357999999999999999999986 33222 1 12234578877 556666544
No 90
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.57 E-value=0.00044 Score=68.80 Aligned_cols=125 Identities=15% Similarity=0.119 Sum_probs=85.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+..... .+.+... .-..+-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~---~i~~~~~----------------~~~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA---VLIGGDT----------------LAERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc---EEEecCc----------------CCCCCCCHH
Confidence 468999999999999999999999999888888888888753210 0000000 001233455
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-Ec--CC--cc-HHHHhccCEEecCCChhHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--AD--AT-DAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~--~~--~~-~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
--..+++.+.-....++||||+.+|..|-+.|++.. ++ |. .. ......+|+++ +++..+.+.+.
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~~ 225 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPAT 225 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHhc
Confidence 455666666666678999999999999999999864 33 32 11 12234689998 56777765543
No 91
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.53 E-value=0.00086 Score=68.39 Aligned_cols=125 Identities=12% Similarity=0.076 Sum_probs=80.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+..... ...+..... -..+-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~-d~i~~~~~~-----------------~~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP-DHVVTTDDV-----------------PAGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc-eEEEcCCcC-----------------CCCCCChH
Confidence 467899999999999999999999999888877777777643210 000000000 01122343
Q ss_pred HHHHHHHHHHhC-CCEEEEECCCccCHHHHHhCCc---cEEcCCc-------------------------cHHHHhccCE
Q 005830 573 HKYEIVKRLQER-KHICGMTGDGVNDAPALKKADI---GIAVADA-------------------------TDAARSASDI 623 (675)
Q Consensus 573 ~K~~iv~~l~~~-~~~v~~iGDg~ND~~al~~A~v---gia~~~~-------------------------~~~a~~~ad~ 623 (675)
-=....+.+.-. ...++||||+.+|+.+-+.|++ |+.-|.+ .+.....+|+
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~ 242 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHY 242 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCe
Confidence 334444444432 3569999999999999999998 3333322 1223345888
Q ss_pred EecCCChhHHHHHH
Q 005830 624 VLTEPGLSVIISAV 637 (675)
Q Consensus 624 vl~~~~~~~i~~~i 637 (675)
++ +++..+...+
T Consensus 243 vi--~~~~~l~~~l 254 (267)
T PRK13478 243 VI--DTIADLPAVI 254 (267)
T ss_pred eh--hhHHHHHHHH
Confidence 88 6677777665
No 92
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.52 E-value=0.00096 Score=62.99 Aligned_cols=144 Identities=17% Similarity=0.189 Sum_probs=95.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCcc----------------ccccCcccH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDK----------------DASIAALPV 556 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~----------------~~~~~~~~~ 556 (675)
++-||+.++++.|++. ...+++|---...+.++|..+|++-.......+.-++. ....+++++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3568999999999876 56777777888889999999998532211111100000 011122211
Q ss_pred HHHhhhcCEEEecCHHHHHHHHHHHH---------------hC---CCEEEEECCCccCHHHHHhCC-c-cEEcC-CccH
Q 005830 557 DELIEKADGFAGVFPEHKYEIVKRLQ---------------ER---KHICGMTGDGVNDAPALKKAD-I-GIAVA-DATD 615 (675)
Q Consensus 557 ~~~~~~~~v~~r~~p~~K~~iv~~l~---------------~~---~~~v~~iGDg~ND~~al~~A~-v-gia~~-~~~~ 615 (675)
-+.+. .+|.|..|..-.++++.++ .. ....+.+||++.|+.||+++. - |+|+. ||.+
T Consensus 162 fe~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 11111 2488888876555554444 22 234688999999999999874 3 47776 8888
Q ss_pred HHHhccCEEecCCChhHHHHHHHH
Q 005830 616 AARSASDIVLTEPGLSVIISAVLT 639 (675)
Q Consensus 616 ~a~~~ad~vl~~~~~~~i~~~i~~ 639 (675)
-+...||+.+..++..+...+|++
T Consensus 240 Yal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccccceEEeccchhhhhHHHHH
Confidence 888899999999998888877754
No 93
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.44 E-value=0.00081 Score=67.61 Aligned_cols=43 Identities=7% Similarity=-0.038 Sum_probs=38.9
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 534 (675)
+..-+.+.++|++|+++||.+++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3466779999999999999999999999999999999999853
No 94
>PRK06769 hypothetical protein; Validated
Probab=97.41 E-value=0.00078 Score=63.73 Aligned_cols=123 Identities=10% Similarity=0.003 Sum_probs=73.1
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCE
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLA--------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG 565 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 565 (675)
+-|+++++++.|++.|+++.++|+.... ......+..|+........ ..+.. .-
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~-----------------~~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPH-KHGDG-----------------CE 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcC-CCCCC-----------------CC
Confidence 6799999999999999999999987631 1222233455532100000 00000 00
Q ss_pred EEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-EcCC--ccH--------HHHhccCEEecCCChhHHH
Q 005830 566 FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVAD--ATD--------AARSASDIVLTEPGLSVII 634 (675)
Q Consensus 566 ~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~~~--~~~--------~a~~~ad~vl~~~~~~~i~ 634 (675)
..+-.|+-=..+++.+......++||||..+|+.+-++|++-. ++.. +.+ .....+|+++ +++..+.
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~--~~~~el~ 168 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIA--ENFEDAV 168 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchh--hCHHHHH
Confidence 1233455445666666555567999999999999999999844 3332 222 1123466666 4466665
Q ss_pred HH
Q 005830 635 SA 636 (675)
Q Consensus 635 ~~ 636 (675)
..
T Consensus 169 ~~ 170 (173)
T PRK06769 169 NW 170 (173)
T ss_pred HH
Confidence 54
No 95
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.36 E-value=0.0013 Score=66.59 Aligned_cols=121 Identities=17% Similarity=0.086 Sum_probs=81.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+...... .+.+... -..+-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--ii~~~d~-----------------~~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV--VLAAEDV-----------------YRGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE--EEecccC-----------------CCCCCCHH
Confidence 4689999999999999999999999999999999888998532110 0100000 01223344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-Ec-CCccHHHHhccCEEecCCChhHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV-ADATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~-~~~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
-=...++.+.-....++||||..+|+.|-++|++-. ++ +.........+|+++ ++++.+.
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~ 231 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLS 231 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHH
Confidence 444555555555667999999999999999999843 33 322222334578887 4566554
No 96
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.30 E-value=0.0016 Score=65.65 Aligned_cols=116 Identities=12% Similarity=0.123 Sum_probs=79.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+-....+...-+.+|+...... .+.+.+. -..+-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--iv~~~~~-----------------~~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQA--VIIGSEC-----------------EHAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcE--EEecCcC-----------------CCCCCChH
Confidence 4678999999999999999999999999999999999998542110 0111000 01233455
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-Ec--CCc-cHHHHhccCEEecC
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AV--ADA-TDAARSASDIVLTE 627 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~--~~~-~~~a~~~ad~vl~~ 627 (675)
--....+.+.-....++||||+.+|+.+-++|++-. ++ +.. .+.....+|+++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 545566666555677999999999999999999843 23 221 12223468888844
No 97
>PRK11590 hypothetical protein; Provisional
Probab=97.29 E-value=0.0022 Score=62.83 Aligned_cols=108 Identities=13% Similarity=0.037 Sum_probs=74.5
Q ss_pred CCCcchHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 493 PPRHDSAETI-RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i-~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.+.|++.+.| +.+++.|++++++|+-....+..+++.+|+... ..+.+...+....+.- .-..+..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~----~~~i~t~l~~~~tg~~---------~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR----VNLIASQMQRRYGGWV---------LTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc----CceEEEEEEEEEccEE---------CCccCCC
Confidence 3589999999 578889999999999999999999999986210 0111111110000000 0123556
Q ss_pred HHHHHHHHHH-HhCCCEEEEECCCccCHHHHHhCCccEEcCCc
Q 005830 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVADA 613 (675)
Q Consensus 572 ~~K~~iv~~l-~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~ 613 (675)
++|..-++.. ........+-||+.||.|||+.|+.+++++..
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 8898877654 33345567899999999999999999999743
No 98
>PLN02382 probable sucrose-phosphatase
Probab=97.20 E-value=0.00052 Score=74.10 Aligned_cols=66 Identities=24% Similarity=0.217 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhC-------CCEEEEECCCccCHHHHHhCC-ccEEcCCccHHHHhcc--------CEEec-CCChhHHHH
Q 005830 573 HKYEIVKRLQER-------KHICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLT-EPGLSVIIS 635 (675)
Q Consensus 573 ~K~~iv~~l~~~-------~~~v~~iGDg~ND~~al~~A~-vgia~~~~~~~a~~~a--------d~vl~-~~~~~~i~~ 635 (675)
.|...++.|.+. ...|+++||+.||.+||+.|+ .||+|+|+.+..++.+ +++.. +.+-+++.+
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~ 254 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQ 254 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHH
Confidence 577777777554 347899999999999999999 6999999999888643 55533 456777887
Q ss_pred HHH
Q 005830 636 AVL 638 (675)
Q Consensus 636 ~i~ 638 (675)
+|.
T Consensus 255 al~ 257 (413)
T PLN02382 255 AIG 257 (413)
T ss_pred HHH
Confidence 774
No 99
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.20 E-value=0.00062 Score=65.98 Aligned_cols=94 Identities=18% Similarity=0.083 Sum_probs=68.3
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecC
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 570 (675)
.+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..... ..+... .+..+..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~--~~~~~~------------------~~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP--VQIWME------------------DCPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC--EEEeec------------------CCCCCcC
Confidence 34567788999999999999999999999999999999999853211 000000 0112445
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhC
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A 604 (675)
|+--..+++.+.-....++||||+.+|+.+-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 6655666676666667899999999999987764
No 100
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.18 E-value=0.0041 Score=62.63 Aligned_cols=137 Identities=10% Similarity=0.061 Sum_probs=80.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+...... +.........++. +.. ... . -+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~---IvSN~L~f~~dGv-ltG-~~~-P---~i~~ 190 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVK---VVSNFMDFDEDGV-LKG-FKG-P---LIHT 190 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCce---EEeeeEEECCCCe-EeC-CCC-C---cccc
Confidence 46799999999999999999999999999999999999998532110 1000000000000 000 000 0 0011
Q ss_pred HHHHHHHH-----HHH--hCCCEEEEECCCccCHHHHHhC---CccEEcC--Cc-----cHHHHhccCEEecCCChhHHH
Q 005830 572 EHKYEIVK-----RLQ--ERKHICGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 572 ~~K~~iv~-----~l~--~~~~~v~~iGDg~ND~~al~~A---~vgia~~--~~-----~~~a~~~ad~vl~~~~~~~i~ 634 (675)
..|.+.+. .+. .....|+++|||.||+.|..-. .--+.+| +. -+.-.++-|+|+.+|.--.++
T Consensus 191 ~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~ 270 (277)
T TIGR01544 191 FNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVA 270 (277)
T ss_pred cccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHH
Confidence 34544332 222 2346799999999999996543 2233333 32 223456789999987655555
Q ss_pred HHH
Q 005830 635 SAV 637 (675)
Q Consensus 635 ~~i 637 (675)
..|
T Consensus 271 ~~i 273 (277)
T TIGR01544 271 NSI 273 (277)
T ss_pred HHH
Confidence 443
No 101
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.16 E-value=0.0016 Score=63.63 Aligned_cols=107 Identities=12% Similarity=0.015 Sum_probs=73.7
Q ss_pred CCCcchHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 493 PPRHDSAETIR-RALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~-~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..++... ..+.+...+.. ++.. ..-..+..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~----~~~i~t~le~~-~gg~--------~~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR----LNLIASQIERG-NGGW--------VLPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc----CcEEEEEeEEe-CCce--------EcCccCCC
Confidence 46899999995 78889999999999999999999998665321 01111111100 0000 01123556
Q ss_pred HHHHHHHHHH-HhCCCEEEEECCCccCHHHHHhCCccEEcCC
Q 005830 572 EHKYEIVKRL-QERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (675)
Q Consensus 572 ~~K~~iv~~l-~~~~~~v~~iGDg~ND~~al~~A~vgia~~~ 612 (675)
++|..-++.. ........+-||+.||.|||+.||..++++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 8888866644 3233456789999999999999999999974
No 102
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.16 E-value=0.0025 Score=71.30 Aligned_cols=48 Identities=10% Similarity=0.074 Sum_probs=40.1
Q ss_pred EEecccCC-CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 486 GLLPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 486 G~i~~~d~-lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
|.+.-.|. .-+.+.++|++++++|+.++++||+....+..+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 55554333 4467899999999999999999999999999999999974
No 103
>PRK11587 putative phosphatase; Provisional
Probab=97.11 E-value=0.0022 Score=63.21 Aligned_cols=114 Identities=13% Similarity=0.125 Sum_probs=73.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|+++|+++.++|+.+...+...-+..|+... . .+...+ . .-..+-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~---~-~i~~~~-----------~-----~~~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP---E-VFVTAE-----------R-----VKRGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc---c-EEEEHH-----------H-----hcCCCCCcH
Confidence 4689999999999999999999999887666665566666311 0 010000 0 001122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEcCCcc-HHHHhccCEEec
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLT 626 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~~~~~-~~a~~~ad~vl~ 626 (675)
-=....+.+.-....++||||+.+|+.+-+.|++- |++..+. ......+|+++.
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 44444555554567899999999999999999984 5554322 223346788773
No 104
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.10 E-value=0.002 Score=71.09 Aligned_cols=124 Identities=11% Similarity=0.052 Sum_probs=82.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...... .+...+ +..+..|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~--i~~~d~------------------v~~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE--TFSIEQ------------------INSLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce--eEecCC------------------CCCCCCcH
Confidence 5789999999999999999999999999999999999998542111 010000 00111233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcC--CccHHHHhccCEEecCCChhHHHHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVA--DATDAARSASDIVLTEPGLSVIISAVLTS 640 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~--~~~~~a~~~ad~vl~~~~~~~i~~~i~~g 640 (675)
--...++.+ ....++++||+.+|+.+-+.|++ .|++. ...+.....+|+++ +++..+...+...
T Consensus 390 ~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 390 LVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 222223333 24579999999999999999998 34442 22222234689988 5688877766443
No 105
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.09 E-value=0.0021 Score=63.45 Aligned_cols=100 Identities=19% Similarity=0.224 Sum_probs=67.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|++.|++++++|+-+...+....+.+|+...... .+.+.+. -..+-.|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~--i~~~~~~-----------------~~~KP~~~ 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDA--VITSEEE-----------------GVEKPHPK 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccE--EEEeccC-----------------CCCCCCHH
Confidence 4789999999999999999999999888878888888887432100 0000000 01122333
Q ss_pred HHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCc-cEEcC
Q 005830 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADI-GIAVA 611 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~v-gia~~ 611 (675)
-=..+.+.+.-....++||||.. +|+.+-++|++ .|.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 33344444444456799999998 99999999998 44444
No 106
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.00 E-value=0.0029 Score=65.14 Aligned_cols=122 Identities=19% Similarity=0.126 Sum_probs=75.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+-+......+-+..+..........+.+.. .-..+-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~-----------------~~~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDD-----------------VPKKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccc-----------------cCCCCCCHH
Confidence 468999999999999999999999988777666555443211000000000000 001223344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc-CCc--cHHHHhccCEEecCCChhHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV-ADA--TDAARSASDIVLTEPGLSVI 633 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~-~~~--~~~a~~~ad~vl~~~~~~~i 633 (675)
-=..+++.+.-....++||||+.+|+.+-++|++.... ..+ .......+|+++ +++..+
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l 268 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDV 268 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhc
Confidence 44555566655566799999999999999999986544 222 111123588887 445443
No 107
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.00 E-value=0.006 Score=58.18 Aligned_cols=128 Identities=20% Similarity=0.109 Sum_probs=73.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHH---------------HHHHHHHHhCCCCCCCCCCCccCCccccccCcccHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (675)
.+.||+.+.+++|++.|+++.++|+.+.. ....+-+..|+... ..+...... .
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~~----~---- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHHP----E---- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCCC----C----
Confidence 35799999999999999999999987621 11122233444100 000000000 0
Q ss_pred HHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-EcCCcc--H-HHHhcc--CEEecCCChh
Q 005830 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADAT--D-AARSAS--DIVLTEPGLS 631 (675)
Q Consensus 558 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~~~~~--~-~a~~~a--d~vl~~~~~~ 631 (675)
+..-..+-.|+--..+++.+.-....++||||+.+|+.+-++|++.. .+..|. . .....+ |+++ +++.
T Consensus 97 ----~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 97 ----DGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ----CCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 00001233455445566666555678999999999999999999843 222222 1 122235 7877 5577
Q ss_pred HHHHHHH
Q 005830 632 VIISAVL 638 (675)
Q Consensus 632 ~i~~~i~ 638 (675)
.+.+.+.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 7766553
No 108
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.99 E-value=0.0027 Score=61.86 Aligned_cols=39 Identities=31% Similarity=0.360 Sum_probs=35.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG 531 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 531 (675)
++.+.+.++|++|++.|++++++||+.......+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999888754
No 109
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.92 E-value=0.0052 Score=64.91 Aligned_cols=121 Identities=17% Similarity=0.112 Sum_probs=82.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|++.|+++.++|+.....+..+-+..||...... .+.+.+. ...+-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~--Iv~sddv-----------------~~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV--IVAAEDV-----------------YRGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE--EEecCcC-----------------CCCCCCHH
Confidence 4679999999999999999999999999999999999998532110 0000000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-EcCCccHHH-HhccCEEecCCChhHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVADATDAA-RSASDIVLTEPGLSVII 634 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~~~~~~~a-~~~ad~vl~~~~~~~i~ 634 (675)
-=...++.+.-....++|+||..+|+.|-+.|++-. ++..+.+.. ...||+++ +++..+.
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL~ 338 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDELS 338 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHHH
Confidence 445566666656778999999999999999999943 333322222 23588887 5576653
No 110
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=96.89 E-value=0.0019 Score=64.91 Aligned_cols=68 Identities=22% Similarity=0.239 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhCCccEEcCCccHH-----HHhcc---C-EEecCCChhHHHHHH
Q 005830 571 PEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKADIGIAVADATDA-----ARSAS---D-IVLTEPGLSVIISAV 637 (675)
Q Consensus 571 p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~-----a~~~a---d-~vl~~~~~~~i~~~i 637 (675)
..+|...|+.++++ ...|+++||+.||.+||..++-||.++|+.+. ..... . +.-..+.-.+|++++
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 35798888888775 34688899999999999999999999988776 22222 2 344455667777776
Q ss_pred H
Q 005830 638 L 638 (675)
Q Consensus 638 ~ 638 (675)
.
T Consensus 243 ~ 243 (247)
T PF05116_consen 243 Q 243 (247)
T ss_dssp H
T ss_pred H
Confidence 4
No 111
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=96.88 E-value=0.011 Score=69.11 Aligned_cols=170 Identities=19% Similarity=0.179 Sum_probs=99.3
Q ss_pred HHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecc--cCCCCcchHHHHHHHHh-CCCeEEEEcCCCHHHHHH
Q 005830 449 HAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPL--FDPPRHDSAETIRRALN-LGVNVKMITGDQLAIGKE 525 (675)
Q Consensus 449 ~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~--~d~lr~~~~~~i~~l~~-~gi~v~~~TGd~~~~a~~ 525 (675)
+.....|...-.|.+++-+.. |++..-.- ...+.+++.++|++|.+ .|+.|+++||++......
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344555555566777776655 44432111 12366899999999999 699999999999988877
Q ss_pred HHHHhCCCCCCCCCCCc---cCCccc---------------------------------cc------cCccc--------
Q 005830 526 TGRRLGMGTNMYPSSSL---LGQDKD---------------------------------AS------IAALP-------- 555 (675)
Q Consensus 526 ia~~~gi~~~~~~~~~~---~~~~~~---------------------------------~~------~~~~~-------- 555 (675)
.....++.- +...... .++... .. ..+..
T Consensus 548 ~~~~~~l~l-iaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~ 626 (726)
T PRK14501 548 WFGDLPIHL-VAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANE 626 (726)
T ss_pred HhCCCCeEE-EEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHH
Confidence 665444310 0000000 000000 00 00000
Q ss_pred HHHHhh----hcC--E-----EEecCH--HHHHHHHHHHHhC--CCEEEEECCCccCHHHHHhC---CccEEcCCccHHH
Q 005830 556 VDELIE----KAD--G-----FAGVFP--EHKYEIVKRLQER--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAA 617 (675)
Q Consensus 556 ~~~~~~----~~~--v-----~~r~~p--~~K~~iv~~l~~~--~~~v~~iGDg~ND~~al~~A---~vgia~~~~~~~a 617 (675)
+...+. +.. + +..+.| -+|...++.+.+. ...++++||+.||.+|++.+ +.+|+||++
T Consensus 627 l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~---- 702 (726)
T PRK14501 627 LILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG---- 702 (726)
T ss_pred HHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----
Confidence 111111 111 1 112223 4788888888764 35799999999999999986 578888864
Q ss_pred HhccCEEecCCChhHHHHHHH
Q 005830 618 RSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 618 ~~~ad~vl~~~~~~~i~~~i~ 638 (675)
+.+|++.+.+ -..+..+++
T Consensus 703 ~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 703 ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred CCcceEeCCC--HHHHHHHHH
Confidence 4678899854 455665554
No 112
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.85 E-value=0.006 Score=54.75 Aligned_cols=93 Identities=16% Similarity=0.139 Sum_probs=65.7
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhc
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQ--------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (675)
-++.|++.++++.|+++|+++.++|+.. ........+.+|+...... ...
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~------------------- 81 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLY---ACP------------------- 81 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEE---ECC-------------------
Confidence 3678999999999999999999999988 6777778888887421000 000
Q ss_pred CEEEecCHHHHHHHHHHHH-hCCCEEEEECC-CccCHHHHHhCCcc
Q 005830 564 DGFAGVFPEHKYEIVKRLQ-ERKHICGMTGD-GVNDAPALKKADIG 607 (675)
Q Consensus 564 ~v~~r~~p~~K~~iv~~l~-~~~~~v~~iGD-g~ND~~al~~A~vg 607 (675)
-..+-.|+-=..+++.++ -....++|||| ..+|+.+-+.+++-
T Consensus 82 -~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 -HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred -CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 011223343345556663 55678999999 69999999998873
No 113
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.82 E-value=0.0041 Score=60.20 Aligned_cols=97 Identities=14% Similarity=0.103 Sum_probs=67.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|++.|+++.++|+-+........+.+|+..... ..+...+. -..+-.|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd--~i~~s~~~-----------------~~~KP~~~ 152 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD--AVLSADAV-----------------RAYKPAPQ 152 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh--eeEehhhc-----------------CCCCCCHH
Confidence 467999999999999999999999988888888888889743210 00000000 01122233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
-=..+.+.+.-....+++|||+.+|+.+-++|++-.
T Consensus 153 ~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 153 VYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 334455555545667999999999999999998853
No 114
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.82 E-value=0.0044 Score=64.36 Aligned_cols=108 Identities=13% Similarity=0.071 Sum_probs=76.2
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
..+++.+++.+.++.|++.|++++++||.+...+..+.+.+|+...... .+.+.. ....++.... -.+-
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~--------~~~~~~~~~~-~~kp 252 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRP--------PDMHFQREQG-DKRP 252 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCc--------chhhhcccCC-CCCC
Confidence 5678999999999999999999999999999999999999988531110 000000 0000000000 1244
Q ss_pred CHHHHHHHHHHHHh-CCCEEEEECCCccCHHHHHhCCccE
Q 005830 570 FPEHKYEIVKRLQE-RKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 570 ~p~~K~~iv~~l~~-~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
.|+-+...++.+-. ....++|+||..+|+.+-+.|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 57777777776644 3478999999999999999999864
No 115
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.79 E-value=0.0049 Score=60.81 Aligned_cols=122 Identities=12% Similarity=0.064 Sum_probs=77.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++. +++.++|+-.........+.+|+..... ..+..... -..+-.|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd--~i~~~~~~-----------------~~~KP~~~ 156 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD--DIFVSEDA-----------------GIQKPDKE 156 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC--EEEEcCcc-----------------CCCCCCHH
Confidence 5689999999999999 9999999998888888888888853210 00000000 01122233
Q ss_pred HHHHHHHHH-HhCCCEEEEECCCc-cCHHHHHhCCc-cEEcC--CccHHHHhccCEEecCCChhHHHHH
Q 005830 573 HKYEIVKRL-QERKHICGMTGDGV-NDAPALKKADI-GIAVA--DATDAARSASDIVLTEPGLSVIISA 636 (675)
Q Consensus 573 ~K~~iv~~l-~~~~~~v~~iGDg~-ND~~al~~A~v-gia~~--~~~~~a~~~ad~vl~~~~~~~i~~~ 636 (675)
-=...++.+ .-....+++|||+. +|+.+-+.+++ +|.+. ..+......+|+++ ++++.+..+
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 334445555 43456799999998 89999999997 33332 22222223567776 456666543
No 116
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.79 E-value=0.0036 Score=61.98 Aligned_cols=96 Identities=10% Similarity=-0.017 Sum_probs=64.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.||+.+.++.|++.|+++.++|+.+...+...-+..|+..... ..+.+... -..+-.|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd--~iv~s~~~-----------------~~~KP~p~ 153 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD--LLLSTHTF-----------------GYPKEDQR 153 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC--EEEEeeeC-----------------CCCCCCHH
Confidence 568999999999999999999999988888877777788743110 00000000 00112233
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
-=....+.+.-....++||||+.+|+.+-++|++.
T Consensus 154 ~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 154 LWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 22334444444456799999999999999999996
No 117
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.77 E-value=0.0026 Score=62.98 Aligned_cols=91 Identities=21% Similarity=0.243 Sum_probs=61.6
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGD----QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
+.+++.+.++.++++|+++.++|+. ...++..+.+.+|+.... ..+.+.+.. ...
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f---~~i~~~d~~------------------~~~ 173 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN---PVIFAGDKP------------------GQY 173 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe---eEEECCCCC------------------CCC
Confidence 4455999999999999999999998 667899999999996321 011110000 000
Q ss_pred CHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc-EEc
Q 005830 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG-IAV 610 (675)
Q Consensus 570 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg-ia~ 610 (675)
.| +|. ..+++.+ .++|+||..||..+-++|++- |++
T Consensus 174 Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 174 QY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 12 122 2344444 489999999999999999883 444
No 118
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.74 E-value=0.0028 Score=58.06 Aligned_cols=110 Identities=15% Similarity=0.071 Sum_probs=70.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE--ecC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA--GVF 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~~ 570 (675)
.++|+-++.++.+++.+++++++|+.-......+-..++=-..+.....+...... ..++. .. .++. ..-
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~i-h~dg~-h~------i~~~~ds~f 144 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYI-HIDGQ-HS------IKYTDDSQF 144 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceE-cCCCc-ee------eecCCcccc
Confidence 47899999999999999999999988776666666665511110000000000000 00000 00 0000 111
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
-.+|...|+.+++....+.|||||+.|+.|-+.+|+=.|-
T Consensus 145 G~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 145 GHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred CCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 3479999999999999999999999999999988886653
No 119
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.61 E-value=0.0058 Score=60.50 Aligned_cols=90 Identities=24% Similarity=0.320 Sum_probs=62.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC----HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQ----LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
.+.+++++.++.+++.|+++.++||+. ..++..+.+..|+........ +++.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~v------------------------il~g 169 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPV------------------------IFAG 169 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeE------------------------EEcC
Confidence 367889999999999999999999964 568888888899842111110 1221
Q ss_pred cCH--HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEc
Q 005830 569 VFP--EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (675)
Q Consensus 569 ~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~ 610 (675)
-++ .+|.. .+++.+ .++|+||..+|..+-++|++ +|.+
T Consensus 170 d~~~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 170 DKPGQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred CCCCCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 111 23433 334444 58899999999999999998 4444
No 120
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.60 E-value=0.0025 Score=59.85 Aligned_cols=96 Identities=18% Similarity=0.189 Sum_probs=69.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|++++++|+.+........+.+|+.... ...+...+.. ..+..|+
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f--~~i~~~~~~~-----------------~~Kp~~~ 137 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF--DEIISSDDVG-----------------SRKPDPD 137 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC--SEEEEGGGSS-----------------SSTTSHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc--ccccccchhh-----------------hhhhHHH
Confidence 46899999999999999999999999999999999999985211 0111000000 1122234
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
-=..+++.+.-.+..+++|||+..|+.+-+.|++-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 44556666665677899999999999999999874
No 121
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.54 E-value=0.015 Score=55.14 Aligned_cols=126 Identities=16% Similarity=0.103 Sum_probs=68.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH---------------HHHHHHHHhCCCCCC-CC-CCCccCCccccccCcccH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLA---------------IGKETGRRLGMGTNM-YP-SSSLLGQDKDASIAALPV 556 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~-~~-~~~~~~~~~~~~~~~~~~ 556 (675)
+.|++.++|+.|+++|+++.++|.-+.. ....+..+.|+.... .. .....+.. .+
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~--------~~ 98 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVE--------EF 98 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccc--------cc
Confidence 5689999999999999999999976631 111222233332100 00 00000000 00
Q ss_pred HHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE--EcCCcc---HHHHhccCEEecCCChh
Q 005830 557 DELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI--AVADAT---DAARSASDIVLTEPGLS 631 (675)
Q Consensus 557 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi--a~~~~~---~~a~~~ad~vl~~~~~~ 631 (675)
. ...-..+-.|+-=....+.+.-....++||||..+|+.+-++|++.. .+..|. ......+|+++ +++.
T Consensus 99 ~----~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~~~~ 172 (176)
T TIGR00213 99 R----QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--NSLA 172 (176)
T ss_pred c----CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--ccHH
Confidence 0 00001122343334444444444567999999999999999999953 433222 11223488988 4555
Q ss_pred HH
Q 005830 632 VI 633 (675)
Q Consensus 632 ~i 633 (675)
.+
T Consensus 173 el 174 (176)
T TIGR00213 173 DL 174 (176)
T ss_pred Hh
Confidence 54
No 122
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.51 E-value=0.0044 Score=59.13 Aligned_cols=94 Identities=11% Similarity=0.003 Sum_probs=60.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++|+.|+++|+++.++|+... +....+.+|+...... .+.+.+ .-..+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~--~~~~~~-----------------~~~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDA--IVDPAE-----------------IKKGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcE--EEehhh-----------------cCCCCCChH
Confidence 5679999999999999999999997532 3456677777432100 000000 001122333
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
-=....+.+.-....++||||+.+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 33344444443445799999999999999999984
No 123
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.47 E-value=0.02 Score=53.91 Aligned_cols=110 Identities=10% Similarity=0.048 Sum_probs=73.0
Q ss_pred HHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCC
Q 005830 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMG 533 (675)
Q Consensus 455 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~-~~~a~~ia~~~gi~ 533 (675)
+.+.|.+.+.+-... ++.-- =...+-+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------ccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 445788888776543 11100 123578999999999999999999999987 56677777777763
Q ss_pred CCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCcc
Q 005830 534 TNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG 607 (675)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vg 607 (675)
... . ..+-.|+-=..+.+.+.-....++||||.. .|..+-+.|++-
T Consensus 85 ~~~-------~---------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VLP-------H---------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EEc-------C---------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 110 0 011223322333344433456799999998 799999999983
No 124
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.44 E-value=0.011 Score=56.23 Aligned_cols=94 Identities=16% Similarity=0.149 Sum_probs=63.6
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|++++++|+-.... ..+..++|+...... .+.+.. .-..+-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~--i~~~~~-----------------~~~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDV--VIFSGD-----------------VGRGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCE--EEEcCC-----------------CCCCCCCHH
Confidence 578999999999999999999999888776 555555787431100 000000 001222344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v 606 (675)
--..+.+.+......++++||...|+.+-+++++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 4455555555556789999999999999999887
No 125
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.40 E-value=0.023 Score=52.74 Aligned_cols=104 Identities=13% Similarity=0.160 Sum_probs=65.4
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHh---C--CCCCCCCCCCccCCccccccCcccHHHHhhh
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK---ETGRRL---G--MGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~---~ia~~~---g--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (675)
+|.+.+++++++++++++|++++.+||+....+. ....++ | +... + .+... +..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g--~--li~~~-------g~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHG--P--VLLSP-------DRLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCc--e--EEEcC-------Ccchhh-hhc
Confidence 4678999999999999999999999999987774 344441 2 3210 0 00000 000000 000
Q ss_pred cCEEEecCHHHHHHHHHHHHh-----CCCEEEEECCCccCHHHHHhCCcc
Q 005830 563 ADGFAGVFPEHKYEIVKRLQE-----RKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 563 ~~v~~r~~p~~K~~iv~~l~~-----~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
.+..+-.-+.|...++.+.+ ....++.+|++.+|+.+.+++++-
T Consensus 93 -e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 -EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred -ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11222222348777877776 345677899999999999887764
No 126
>PRK09449 dUMP phosphatase; Provisional
Probab=96.40 E-value=0.015 Score=57.45 Aligned_cols=123 Identities=15% Similarity=0.104 Sum_probs=76.2
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.++++.|+ .|+++.++|+.....+...-+..|+...... .+.+.+. -..+-.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~--v~~~~~~-----------------~~~KP~p~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDL--LVISEQV-----------------GVAKPDVA 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCE--EEEECcc-----------------CCCCCCHH
Confidence 36799999999999 6899999999888888777777887421100 0000000 01122233
Q ss_pred HHHHHHHHHHhC-CCEEEEECCCc-cCHHHHHhCCcc-EEcC-CccH-HHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQER-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~-~~~v~~iGDg~-ND~~al~~A~vg-ia~~-~~~~-~a~~~ad~vl~~~~~~~i~~~i 637 (675)
-=..+++.+.-. ...+++|||+. +|+.+-++|++- |.+. .+.. .....+|+++ +++..+.+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 334444544322 25799999998 799999999985 4443 2221 1112478877 5577776654
No 127
>PLN02940 riboflavin kinase
Probab=96.38 E-value=0.011 Score=63.53 Aligned_cols=119 Identities=18% Similarity=0.134 Sum_probs=75.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR-RLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
++.||+.+.++.|++.|+++.++|+.....+....+ ..|+...... .+.+.+ .-..+-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~--ii~~d~-----------------v~~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSV--IVGGDE-----------------VEKGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCE--EEehhh-----------------cCCCCCCH
Confidence 467999999999999999999999998877766554 5676321100 000000 00122234
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE-EcCC--ccHHHHhccCEEecCCChhH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI-AVAD--ATDAARSASDIVLTEPGLSV 632 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi-a~~~--~~~~a~~~ad~vl~~~~~~~ 632 (675)
+-=..+++.+.-....++|+||+.+|+.+-++|++.. ++.. ........+|.++ +++..
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i--~sl~e 215 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI--NSLLD 215 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe--CCHhH
Confidence 4444555555545678999999999999999999863 3332 2233334577776 34444
No 128
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.36 E-value=0.0065 Score=57.96 Aligned_cols=94 Identities=13% Similarity=0.088 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.|++.|+++.++|+. ..+..+-+..|+...... .+..... -..+..|+
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~--v~~~~~~-----------------~~~kp~~~ 146 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDA--IVDADEV-----------------KEGKPHPE 146 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCE--eeehhhC-----------------CCCCCChH
Confidence 57899999999999999999999987 556677777887432100 0000000 00111222
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
-=..+.+.+.-....+++|||+.+|+.+-+.|++.
T Consensus 147 ~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 TFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11233333333346799999999999999999874
No 129
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.30 E-value=0.014 Score=54.92 Aligned_cols=110 Identities=6% Similarity=-0.032 Sum_probs=69.7
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhc
Q 005830 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (675)
Q Consensus 485 lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (675)
.....-+-++.|++.+.++.|+++|+++.++|+- ....+..+...+|+...-. ...+...+. .
T Consensus 37 ~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~ 100 (174)
T TIGR01685 37 IDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-D 100 (174)
T ss_pred EeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-e
Confidence 3344444567899999999999999999999976 8888888888888741000 000000000 0
Q ss_pred CEEEecCHHHH--HHHHHHHHh------CCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 564 DGFAGVFPEHK--YEIVKRLQE------RKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 564 ~v~~r~~p~~K--~~iv~~l~~------~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
.+.+.-.+..| ..+.+.+.+ ....++|+||...|+.+-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 11111111122 234454443 246799999999999999999986544
No 130
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.28 E-value=0.011 Score=54.25 Aligned_cols=100 Identities=18% Similarity=0.116 Sum_probs=60.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (675)
++.|++.++++.|++.|+++.++|+.+. ..+..+.+.+|+.....-.. .......
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCC---------
Confidence 4689999999999999999999998652 34455667777741100000 0000000
Q ss_pred HHhhhcCEEEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 558 ELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 558 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
.-..+-.|+-=..+++.+.-....++||||...|+.+-+.+++-.
T Consensus 97 ------~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 97 ------CSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ------CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 000111222223334444434567999999999999999998843
No 131
>PTZ00174 phosphomannomutase; Provisional
Probab=96.07 E-value=0.0038 Score=62.79 Aligned_cols=53 Identities=21% Similarity=0.269 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCCEEEEECC----CccCHHHHHhC-CccEEcCCccHHHHhccCEE
Q 005830 572 EHKYEIVKRLQERKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIV 624 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGD----g~ND~~al~~A-~vgia~~~~~~~a~~~ad~v 624 (675)
-+|..-++.|.+....|+++|| |.||.+||+.| -.|++++|+++..+..+.++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHh
Confidence 4799999999888789999999 99999999976 57888889999888776554
No 132
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.04 E-value=0.0094 Score=55.02 Aligned_cols=90 Identities=22% Similarity=0.248 Sum_probs=58.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
..+++.+.++.|++.|+++.++|+.....+....+.. +.... .. +...+ .+..+..|+-
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f--~~-i~~~~-----------------~~~~Kp~~~~ 123 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF--DL-ILGSD-----------------EFGAKPEPEI 123 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC--cE-EEecC-----------------CCCCCcCHHH
Confidence 3479999999999999999999999888887777764 32210 00 00000 0112223333
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCC
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKAD 605 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~ 605 (675)
=..+.+.+.-.. .++++||..+|+.+-++|+
T Consensus 124 ~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 124 FLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 334444444345 7999999999999988774
No 133
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.89 E-value=0.021 Score=55.41 Aligned_cols=95 Identities=15% Similarity=0.059 Sum_probs=60.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++-|++.++++.|++.|+++.++|+-... .....+.+|+...... .+.... .-..+-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~--i~~s~~-----------------~~~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDF--VVTSYE-----------------VGAEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcce--EEeecc-----------------cCCCCCCHH
Confidence 56799999999999999999999976543 4566677776421100 000000 001122333
Q ss_pred HHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCcc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG 607 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vg 607 (675)
-=..+++.+.-....++||||+. +|+.+-++|++-
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 33334444444456799999997 899999888863
No 134
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.74 E-value=0.021 Score=53.21 Aligned_cols=100 Identities=12% Similarity=0.001 Sum_probs=59.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC---------------HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQ---------------LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVD 557 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (675)
++-|++.++++.|+++|+++.++|.-. ...+..+.+.+|+.-. ..+.+....
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd----~ii~~~~~~--------- 95 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD----DVLICPHFP--------- 95 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee----EEEECCCCC---------
Confidence 356899999999999999999999742 3345666677776410 000000000
Q ss_pred HHhhhcCE-EEecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEE
Q 005830 558 ELIEKADG-FAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIA 609 (675)
Q Consensus 558 ~~~~~~~v-~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia 609 (675)
.... +..-.|+-=..+++.+......++||||+.+|..+-++|++-..
T Consensus 96 ----~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 96 ----DDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ----CCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0000 11112222233334433334569999999999999999998543
No 135
>PLN02811 hydrolase
Probab=95.73 E-value=0.023 Score=55.97 Aligned_cols=98 Identities=15% Similarity=0.120 Sum_probs=58.3
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCE-EEecC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKE-TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG-FAGVF 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~r~~ 570 (675)
++.|++.+.|+.|++.|+++.++||-....... ..+..++.... ...+...+. .+ ..+-.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f--~~i~~~~~~----------------~~~~~KP~ 139 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM--HHVVTGDDP----------------EVKQGKPA 139 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC--CEEEECChh----------------hccCCCCC
Confidence 467999999999999999999999877543322 22222331100 000000000 00 11122
Q ss_pred HHHHHHHHHHHH---hCCCEEEEECCCccCHHHHHhCCccE
Q 005830 571 PEHKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 571 p~~K~~iv~~l~---~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
|+-=...++.+. -....++||||+..|+.+-++|++-.
T Consensus 140 p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 140 PDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred cHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 333344445553 23467999999999999999999944
No 136
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.65 E-value=0.027 Score=55.29 Aligned_cols=100 Identities=13% Similarity=0.058 Sum_probs=67.4
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC---CCCCCCCCCCccCCccccccCcccHHHHhhhcCEE
Q 005830 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG---MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGF 566 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (675)
++-++.||+.++++.|+++|+++.++|..+......+-+..+ +... ++... +..+.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--------------------f~~~f-d~~~g 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--------------------FSGYF-DTTVG 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--------------------cceEE-EeCcc
Confidence 345789999999999999999999999888766665555442 2110 00000 01112
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 567 AGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 567 ~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
.+-.|+-=..+++.+.-....++|+||...|+.|-++|++-...
T Consensus 151 ~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 151 LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 23344444556666655567899999999999999999996543
No 137
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.60 E-value=0.091 Score=47.91 Aligned_cols=111 Identities=14% Similarity=0.163 Sum_probs=78.5
Q ss_pred HHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 005830 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 530 (675)
..+.+.+.|.+.+.+-.++ +++..=. ...-|++++=+.+++++|+++.++|..+...+...++.+
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-------------TLv~wd~--~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-------------TLVPWDN--PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-------------ceecccC--CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 4567788999999887665 4444322 334578888899999999999999999999999999999
Q ss_pred CCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHH--HHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCc
Q 005830 531 GMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK--YEIVKRLQERKHICGMTGDG-VNDAPALKKADI 606 (675)
Q Consensus 531 gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K--~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~v 606 (675)
|+.. ++--..|-.+ .+.++.++-..+.|+||||- ..|+-+=+.|++
T Consensus 84 ~v~f------------------------------i~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 84 GVPF------------------------------IYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred CCce------------------------------eecccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 9852 1111223322 33444444456789999999 568877666665
No 138
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.95 E-value=0.38 Score=48.14 Aligned_cols=94 Identities=15% Similarity=0.130 Sum_probs=59.5
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhc
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGK--ETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~--~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (675)
|.+.-.+.+-|++.++++.|+++|+++.++|.-...... ...+++|+..... . .
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~-~-~---------------------- 72 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP-E-M---------------------- 72 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc-c-e----------------------
Confidence 666667788999999999999999999999985544333 4557788753000 0 0
Q ss_pred CEEEecCHHHHHHHHHHHHh---CCCEEEEECCCccCHHHHHhCC
Q 005830 564 DGFAGVFPEHKYEIVKRLQE---RKHICGMTGDGVNDAPALKKAD 605 (675)
Q Consensus 564 ~v~~r~~p~~K~~iv~~l~~---~~~~v~~iGDg~ND~~al~~A~ 605 (675)
+++.- ......+.+.+++ .+..+.++||+..|...+..++
T Consensus 73 -Ii~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 73 -IISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred -EEccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 11100 0001122222232 2467999999999998886543
No 139
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.87 E-value=0.13 Score=51.82 Aligned_cols=86 Identities=14% Similarity=0.086 Sum_probs=57.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
.++-|++.+.++.+++.|+++.++|+..... +...-+..|+..... . .++.|
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~--d-----------------------~lllr 171 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE--E-----------------------HLLLK 171 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc--c-----------------------eEEeC
Confidence 4567999999999999999999999987433 334556678753210 0 12333
Q ss_pred cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHH
Q 005830 569 VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALK 602 (675)
Q Consensus 569 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~ 602 (675)
-....|..-.+.+.+...+++++||-.+|.....
T Consensus 172 ~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 172 KDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 2222355555556555567999999999986543
No 140
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=94.86 E-value=0.38 Score=48.65 Aligned_cols=48 Identities=27% Similarity=0.345 Sum_probs=37.1
Q ss_pred EEecccCC----CCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCC
Q 005830 486 GLLPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMG 533 (675)
Q Consensus 486 G~i~~~d~----lr~~~~~~i~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~ 533 (675)
|++.-.+. +=|++.++|++|+++|++++++||.+..+ .....+.+|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 55655566 78899999999999999999999977665 34444556764
No 141
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=94.79 E-value=0.13 Score=45.88 Aligned_cols=86 Identities=10% Similarity=0.107 Sum_probs=57.5
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHhC-------CCCCCCCCCCccCCccccccCcccHHHHhhhcC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGD-QLAIGKETGRRLG-------MGTNMYPSSSLLGQDKDASIAALPVDELIEKAD 564 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd-~~~~a~~ia~~~g-------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 564 (675)
++.+++.+.++.|+++|+++.++|+. ....+..+-+..| +... ++..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~--------------------f~~~----- 83 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEY--------------------FDPL----- 83 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhh--------------------hhhh-----
Confidence 68899999999999999999999999 7777767666666 2110 0110
Q ss_pred EEEecCH--HHHHHHHHHHH--hCCCEEEEECCCccCHHHHHh
Q 005830 565 GFAGVFP--EHKYEIVKRLQ--ERKHICGMTGDGVNDAPALKK 603 (675)
Q Consensus 565 v~~r~~p--~~K~~iv~~l~--~~~~~v~~iGDg~ND~~al~~ 603 (675)
+.+.-.| +-=..+++.+. -....++|+||...|...++.
T Consensus 84 ~~~~~~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 84 TIGYWLPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred hhcCCCcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 1111123 32234445554 445789999999999877653
No 142
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.78 E-value=0.029 Score=51.51 Aligned_cols=95 Identities=16% Similarity=0.034 Sum_probs=63.7
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecC
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF 570 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 570 (675)
.-++||++.+.++.|+ .++++.+.|.-+...+..+-+.+|+..... ...+...+ +.+..
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f-~~i~~~~d-------------------~~~~K 101 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFG-YRRLFRDE-------------------CVFVK 101 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEe-eeEEECcc-------------------ccccC
Confidence 3457999999999998 579999999999999999999888742110 00000000 00111
Q ss_pred HHHHHHHHHHHH---hCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 571 PEHKYEIVKRLQ---ERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 571 p~~K~~iv~~l~---~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
|. +.+.++ .....++++||..+|..+-+++++-|..
T Consensus 102 P~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 102 GK----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred Ce----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 21 333333 3456899999999999987777665544
No 143
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.59 E-value=0.1 Score=48.95 Aligned_cols=93 Identities=8% Similarity=-0.015 Sum_probs=57.4
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhh
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLA------------IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK 562 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (675)
-|++.++++.|+++|+++.++|..+.. .+..+.+.+|+... ..+.... .
T Consensus 44 ~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~----~ii~~~~-~-------------- 104 (166)
T TIGR01664 44 YPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQ----VLAATHA-G-------------- 104 (166)
T ss_pred cCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEE----EEEecCC-C--------------
Confidence 489999999999999999999975532 34566677787420 0000000 0
Q ss_pred cCEEEecCHHHHHHHHHHHH--hCCCEEEEECCCc--------cCHHHHHhCCccE
Q 005830 563 ADGFAGVFPEHKYEIVKRLQ--ERKHICGMTGDGV--------NDAPALKKADIGI 608 (675)
Q Consensus 563 ~~v~~r~~p~~K~~iv~~l~--~~~~~v~~iGDg~--------ND~~al~~A~vgi 608 (675)
....-.|+-=..+.+.+. -....++||||.. +|..+-++|++-.
T Consensus 105 --~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 --LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred --CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 011112332234444443 2345799999986 6999988887743
No 144
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.50 E-value=0.093 Score=55.21 Aligned_cols=100 Identities=10% Similarity=-0.031 Sum_probs=58.8
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPV 556 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 556 (675)
-++.|++.++++.|+++|+++.++|+- ....+..+.+..|+... ..+...... .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~~----s--- 97 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHFP----E--- 97 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCcC----c---
Confidence 467899999999999999999999983 12334555666666310 000000000 0
Q ss_pred HHHhhhcCEEEe-cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 557 DELIEKADGFAG-VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 557 ~~~~~~~~v~~r-~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
....+| ..|+-=..+.+.+.-....++||||+.+|..+-+.|++-.
T Consensus 98 ------d~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 98 ------DNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred ------ccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 000111 1122222223333333467999999999999999999854
No 145
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.46 E-value=0.097 Score=51.63 Aligned_cols=101 Identities=19% Similarity=0.198 Sum_probs=66.1
Q ss_pred CCCcchHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHhCCCCCC---CCC-CCccCCccccccCcccHHHHhhhcCEE
Q 005830 493 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIGKETGRRLGMGTNM---YPS-SSLLGQDKDASIAALPVDELIEKADGF 566 (675)
Q Consensus 493 ~lr~~~~~~i~~l--~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~ 566 (675)
|+.|+.++.++.+ ++.|+.+.++|.-+...-..+-+.-|+.... ..+ ..+..... ..+.- ....-+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~------l~v~p--yh~h~C 142 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGR------LRVRP--YHSHGC 142 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCce------EEEeC--ccCCCC
Confidence 5788999999999 5689999999999998888888998985421 111 11110000 00000 000123
Q ss_pred EecCH-HHHHHHHHHHHhC----C---CEEEEECCCccCHHHH
Q 005830 567 AGVFP-EHKYEIVKRLQER----K---HICGMTGDGVNDAPAL 601 (675)
Q Consensus 567 ~r~~p-~~K~~iv~~l~~~----~---~~v~~iGDg~ND~~al 601 (675)
.++.| .=|..+++.++.. | ..|.+||||.||....
T Consensus 143 ~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 143 SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 34444 4688888888765 4 6899999999996543
No 146
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=94.44 E-value=0.045 Score=53.45 Aligned_cols=97 Identities=13% Similarity=0.026 Sum_probs=58.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
-++.|++.+.++.|++.|+++.++|+..... ........++...... .+.... .-..+-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~--v~~s~~-----------------~~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDA--VVESCL-----------------EGLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCE--EEEeee-----------------cCCCCC
Confidence 3578999999999999999999999865432 2222222333111000 000000 001122
Q ss_pred CHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 570 FPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 570 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
.|+-=..+++.+.-....++||||...|+.+-++|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 34433444555544456799999999999999999984
No 147
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=94.44 E-value=0.05 Score=54.56 Aligned_cols=68 Identities=19% Similarity=0.159 Sum_probs=49.0
Q ss_pred EecCHHHHHHHHHHHHhC----CCEEEEECCCccCHHHHHhC--------CccEEcCCccHHHHhccCEEecCCChhHHH
Q 005830 567 AGVFPEHKYEIVKRLQER----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVII 634 (675)
Q Consensus 567 ~r~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~al~~A--------~vgia~~~~~~~a~~~ad~vl~~~~~~~i~ 634 (675)
.+..+.+|...++.+.+. ...++++||+.||.+|++.+ ..||+++.+. .+..|++++ ++...+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~--~~~~~v~ 236 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHL--TGPQQVL 236 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeC--CCHHHHH
Confidence 344456788877776554 34799999999999999998 4777775332 356789988 4677766
Q ss_pred HHHH
Q 005830 635 SAVL 638 (675)
Q Consensus 635 ~~i~ 638 (675)
..+.
T Consensus 237 ~~L~ 240 (244)
T TIGR00685 237 EFLG 240 (244)
T ss_pred HHHH
Confidence 6653
No 148
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=94.05 E-value=0.24 Score=60.23 Aligned_cols=119 Identities=14% Similarity=0.119 Sum_probs=78.9
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEH 573 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 573 (675)
+-||+.+.++.|+++|+++.++|+-....+...-+..|+...... ..+...+. -..+-.|+-
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~~~-----------------~~~KP~Pe~ 223 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSADAF-----------------ENLKPAPDI 223 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECccc-----------------ccCCCCHHH
Confidence 568999999999999999999999988888888888888411000 00000000 011223444
Q ss_pred HHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEcCC---ccHHHHhccCEEecCCChhH
Q 005830 574 KYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAVAD---ATDAARSASDIVLTEPGLSV 632 (675)
Q Consensus 574 K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~~~---~~~~a~~~ad~vl~~~~~~~ 632 (675)
=...++.+.-....++++||..+|+.+-++|++ -|++.. ..+.....+|+++. ++..
T Consensus 224 ~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~--~l~e 284 (1057)
T PLN02919 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRK--DIGN 284 (1057)
T ss_pred HHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC--ChHH
Confidence 455556665556789999999999999999998 344432 22333456788884 4444
No 149
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=93.99 E-value=0.28 Score=48.18 Aligned_cols=81 Identities=19% Similarity=0.192 Sum_probs=54.4
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAI---GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
-|.-|++.++++.+++.|++|+++||+.... +..--++.|+... .. ++-|
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~----~~-----------------------LiLR 171 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW----KH-----------------------LILR 171 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc----Ce-----------------------eeec
Confidence 3677899999999999999999999999755 3333345566421 00 1111
Q ss_pred c------C-HHHHHHHHHHHHhCCC-EEEEECCCccCHH
Q 005830 569 V------F-PEHKYEIVKRLQERKH-ICGMTGDGVNDAP 599 (675)
Q Consensus 569 ~------~-p~~K~~iv~~l~~~~~-~v~~iGDg~ND~~ 599 (675)
- + ..-|...-+.+.+.|+ +++.+||-.+|..
T Consensus 172 ~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 172 GLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred CCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 1 1 1126666666776665 6778999999973
No 150
>PLN03017 trehalose-phosphatase
Probab=93.66 E-value=1.2 Score=46.84 Aligned_cols=61 Identities=21% Similarity=0.216 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhC-------CCEEEEECCCccCHHHHHhC-----CccEEcCCccHHHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQER-------KHICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~-------~~~v~~iGDg~ND~~al~~A-----~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i 637 (675)
+|...++.+-+. +..++++||...|-.|++.. ++||.+|.... ...|++.+ ++.+.+.+++
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 788888777653 23589999999999999865 46666663221 25688888 5677777666
No 151
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=93.66 E-value=0.11 Score=51.18 Aligned_cols=97 Identities=11% Similarity=0.083 Sum_probs=63.1
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.|++.+.++.| ++++.++|+.....+...-+..|+...... ..+.+... -..+-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~-~v~~~~~~-----------------~~~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD-KLFSGYDI-----------------QRWKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc-eEeeHHhc-----------------CCCCCChH
Confidence 4568999999998 489999999988777777777787532110 00000000 01122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
-=....+.+.-....++||||..+|+.+-++|++.+..
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 33444555544456799999999999999999987653
No 152
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=93.52 E-value=0.68 Score=54.80 Aligned_cols=66 Identities=8% Similarity=0.067 Sum_probs=43.9
Q ss_pred HHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHH
Q 005830 451 VIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIGKETGRR 529 (675)
Q Consensus 451 ~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l-~~~gi~v~~~TGd~~~~a~~ia~~ 529 (675)
..+.|.....|.+++-|.. |++-.-...-.+.++..+++++| ++.|+.|+++||+...+....-..
T Consensus 587 i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 587 IVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred HHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 3444555555666665544 33322111235567899999997 778999999999999887766543
No 153
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=93.27 E-value=0.32 Score=50.95 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=66.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----hCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEE-
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR----LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFA- 567 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 567 (675)
++.+++.++|+.|++.|+++.++|.-+...+..+-+. +|+..... .+.+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~--------------------------~~~~~ 84 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFD--------------------------ARSIN 84 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHee--------------------------EEEEe
Confidence 3578999999999999999999999999999888887 66542110 0111
Q ss_pred -ecCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEc
Q 005830 568 -GVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 568 -r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
...|+.=..+.+.+.-....++|+||...|+.+.+++...+.+
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 1223333444455544457899999999999999998887655
No 154
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=93.17 E-value=0.16 Score=49.06 Aligned_cols=97 Identities=10% Similarity=-0.005 Sum_probs=58.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
++.|++.++++.|++.|+++.++|+-+.......-.. .++..... ..+...+ .-..+-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd--~v~~s~~-----------------~~~~KP~p 144 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAAD--HIYLSQD-----------------LGMRKPEA 144 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcC--EEEEecc-----------------cCCCCCCH
Confidence 4689999999999999999999998765543322111 23211000 0000000 00112223
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
+-=..+++.+.-....++++||...|+.+-++|++-.
T Consensus 145 ~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 145 RIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 3334455555555677999999999999999999853
No 155
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=93.12 E-value=0.14 Score=48.68 Aligned_cols=98 Identities=11% Similarity=0.044 Sum_probs=63.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++.+++.+.++.|+ .+++++|+-+...+....+.+|+...... .+....... ....++-.|+
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~--i~~~~~~~~-------------~~~~~KP~p~ 145 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDG--IFCFDTANP-------------DYLLPKPSPQ 145 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCe--EEEeecccC-------------ccCCCCCCHH
Confidence 36789999999997 47899999888888888899988532110 000000000 0000122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 573 HKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
-=..+++.+......++||||...|+.+-+.|++-.
T Consensus 146 ~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 146 AYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 335555666555678999999999999999888743
No 156
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.94 E-value=0.85 Score=43.58 Aligned_cols=37 Identities=19% Similarity=0.147 Sum_probs=33.7
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 497 ~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
.+.+.+..|+++|++|+.+|.-....-...-+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5788999999999999999999998888899999975
No 157
>PLN02580 trehalose-phosphatase
Probab=92.49 E-value=0.22 Score=52.73 Aligned_cols=63 Identities=22% Similarity=0.167 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhC-C-----C-EEEEECCCccCHHHHHh-----CCccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQER-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~-~-----~-~v~~iGDg~ND~~al~~-----A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
-+|...++.+.+. | . .++++||+.||..|++. +++||+|+++.... .|++.+ ++-..+.+++.
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L--~dp~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSL--RDPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEc--CCHHHHHHHHH
Confidence 3888888877654 2 1 25899999999999996 58999998765433 678888 55677766664
No 158
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.28 E-value=0.48 Score=44.09 Aligned_cols=107 Identities=16% Similarity=0.156 Sum_probs=77.2
Q ss_pred HHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCC--eEEEEcCC-------CHHHHHH
Q 005830 455 FAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV--NVKMITGD-------QLAIGKE 525 (675)
Q Consensus 455 ~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi--~v~~~TGd-------~~~~a~~ 525 (675)
+.+.|.|.+.+-.++ ++ ..-=++++.++..+.+++|++.+. +|+++|.- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 667788888776554 11 112357788999999999999877 49999986 4788999
Q ss_pred HHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHhC-----CCEEEEECCC-ccCHH
Q 005830 526 TGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQER-----KHICGMTGDG-VNDAP 599 (675)
Q Consensus 526 ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~-----~~~v~~iGDg-~ND~~ 599 (675)
+++.+|+..- .+....|.-..++.+.++.+ .+.++||||- ..|+-
T Consensus 101 ~~~~lgIpvl-----------------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPVL-----------------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcEE-----------------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 9999998510 12234676667788888755 6679999998 56777
Q ss_pred HHHhCC
Q 005830 600 ALKKAD 605 (675)
Q Consensus 600 al~~A~ 605 (675)
+=+..+
T Consensus 152 ~gN~~G 157 (168)
T PF09419_consen 152 MGNRMG 157 (168)
T ss_pred HhhccC
Confidence 665554
No 159
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=91.59 E-value=0.84 Score=43.67 Aligned_cols=111 Identities=16% Similarity=0.174 Sum_probs=64.6
Q ss_pred CCCcchHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHhCCCC---CCC-CCCCccCCccccccCcccHHHHhhhcCEEE
Q 005830 493 PPRHDSAETIRRALNLGV-NVKMITGDQLAIGKETGRRLGMGT---NMY-PSSSLLGQDKDASIAALPVDELIEKADGFA 567 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi-~v~~~TGd~~~~a~~ia~~~gi~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 567 (675)
|+-|+..++|+.+++.|. .++++|--|......+-+..|+.. .+. +...+...... .+.-.. ..+-+.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L------~v~pyH-~~hsC~ 156 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRL------LVRPYH-TQHSCN 156 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcE------EeecCC-CCCccC
Confidence 567999999999999997 899999988877777777777632 000 01111000000 000000 001133
Q ss_pred ecCHH-HHHHHHHHHHhC-------CCEEEEECCCccCH-HHHHhCCccEEc
Q 005830 568 GVFPE-HKYEIVKRLQER-------KHICGMTGDGVNDA-PALKKADIGIAV 610 (675)
Q Consensus 568 r~~p~-~K~~iv~~l~~~-------~~~v~~iGDg~ND~-~al~~A~vgia~ 610 (675)
++.|. =|..++..++.. -..+.++|||.||. |+++...--++|
T Consensus 157 ~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 157 LCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred cCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 33222 367777666543 13799999999995 555554444555
No 160
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=91.38 E-value=0.42 Score=45.54 Aligned_cols=92 Identities=14% Similarity=0.092 Sum_probs=61.4
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHH
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHK 574 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 574 (675)
-|+ .+.++.|++. +++.++||.....+...-+..|+...... .+...+. -..+-.|+-=
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~--i~~~~~~-----------------~~~KP~p~~~ 148 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDA--VVAADDV-----------------QHHKPAPDTF 148 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceE--EEehhhc-----------------cCCCCChHHH
Confidence 344 6899999875 89999999999999988888988532110 0000000 0122334444
Q ss_pred HHHHHHHHhCCCEEEEECCCccCHHHHHhCCcc
Q 005830 575 YEIVKRLQERKHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 575 ~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vg 607 (675)
....+.+......+++|||..+|+.+-++|++-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 455555554456789999999999999999884
No 161
>PLN02645 phosphoglycolate phosphatase
Probab=90.88 E-value=0.76 Score=47.90 Aligned_cols=49 Identities=18% Similarity=0.231 Sum_probs=39.9
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCC
Q 005830 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (675)
Q Consensus 485 lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 533 (675)
=|++.-.+.+=|++.++|+.|++.|++++++|+....+...++ +.+|+.
T Consensus 36 DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 36 DGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred cCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 3666666777799999999999999999999999977766666 456763
No 162
>PHA02597 30.2 hypothetical protein; Provisional
Probab=90.81 E-value=0.49 Score=45.55 Aligned_cols=92 Identities=11% Similarity=0.117 Sum_probs=52.8
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecC--
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVF-- 570 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~-- 570 (675)
++.||+.+.++.|++.+ +.+++|.-+.......-+.+|+.... +. .+ + ..+.++..
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f-~~-~f--------------~-----~i~~~~~~~~ 131 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALF-PG-AF--------------S-----EVLMCGHDES 131 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhC-CC-cc--------------c-----EEEEeccCcc
Confidence 36799999999999875 56677765444433344555553110 00 00 0 00111111
Q ss_pred -HHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhC--CccE
Q 005830 571 -PEHKYEIVKRLQERKHICGMTGDGVNDAPALKKA--DIGI 608 (675)
Q Consensus 571 -p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A--~vgi 608 (675)
|+--..+++.+. ...++||||..+|+.+-++| ++-.
T Consensus 132 kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 132 KEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred cHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 322222333333 34688999999999999999 9854
No 163
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=89.68 E-value=1 Score=44.97 Aligned_cols=93 Identities=13% Similarity=0.109 Sum_probs=55.0
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++-||+.++++.|++. +++.++|..+.. .+..|+..... ..+..... -..+-.|+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd--~i~~~~~~-----------------~~~KP~p~ 167 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFE--FVLRAGPH-----------------GRSKPFSD 167 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhc--eeEecccC-----------------CcCCCcHH
Confidence 4568999999999975 899999976543 14556532110 00000000 00111222
Q ss_pred HHHHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCccEEc
Q 005830 573 HKYEIVKRLQERKHICGMTGDG-VNDAPALKKADIGIAV 610 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~vgia~ 610 (675)
-=...++.+.-....++||||. ..|+.+-++|++-...
T Consensus 168 ~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 168 MYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 2233344444445679999999 5999999999985443
No 164
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=89.27 E-value=1.6 Score=41.32 Aligned_cols=50 Identities=26% Similarity=0.377 Sum_probs=41.9
Q ss_pred EEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH---HhCC
Q 005830 483 QLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGM 532 (675)
Q Consensus 483 ~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~---~~gi 532 (675)
.+-|.+.++|..-|++.++++.|++++.+|..+|.-..++-+.+.+ ++|+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 4679999999999999999999999999999999777666555554 4565
No 165
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=88.32 E-value=3.7 Score=37.75 Aligned_cols=103 Identities=16% Similarity=0.143 Sum_probs=67.0
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHh-----CCCCCCCCCCCccCCccccccCcccHHHHhhhc
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRL-----GMGTNMYPSSSLLGQDKDASIAALPVDELIEKA 563 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia---~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (675)
|..++++.+..+.+++.|++++-+|++..--+..+- +.. +++.. .+.- +...+-..+. .
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G-----pv~~-------sP~~l~~al~-r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG-----PVLL-------SPDSLFSALH-R 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC-----CEEE-------CCcchhhhhh-c
Confidence 689999999999999999999999999964443322 222 33211 1100 0000000000 1
Q ss_pred CEEEecCHHHHHHHHHHHHhC-----CCEEEEECCCccCHHHHHhCCcc
Q 005830 564 DGFAGVFPEHKYEIVKRLQER-----KHICGMTGDGVNDAPALKKADIG 607 (675)
Q Consensus 564 ~v~~r~~p~~K~~iv~~l~~~-----~~~v~~iGDg~ND~~al~~A~vg 607 (675)
.+..+-.-+.|...++.++.. ....+..|...+|+.+.++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 134444557899999988864 34678899999999999988774
No 166
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=87.64 E-value=0.38 Score=40.83 Aligned_cols=48 Identities=21% Similarity=0.278 Sum_probs=35.7
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHhCCC
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG---RRLGMG 533 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 533 (675)
|++...+++=|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 455566778899999999999999999999988866655544 456764
No 167
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.62 E-value=3.3 Score=40.67 Aligned_cols=123 Identities=16% Similarity=0.194 Sum_probs=72.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
++-+++.++++.+++. ++++++|.-.........+++|+....... +.... .-+++-.|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v--~~s~~-----------------~g~~KP~~~ 158 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAV--FISED-----------------VGVAKPDPE 158 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheE--EEecc-----------------cccCCCCcH
Confidence 4568899999999988 999999987778888888999974321100 00000 001222333
Q ss_pred HHHHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCc-cEEcC-CccH--HHHhccCEEecCCChhHHHHHH
Q 005830 573 HKYEIVKRLQERKHICGMTGDG-VNDAPALKKADI-GIAVA-DATD--AARSASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~v-gia~~-~~~~--~a~~~ad~vl~~~~~~~i~~~i 637 (675)
-=..+.+.+.-....++||||. .||+..-++++. +|-+. .+.. ......|..+ .++..+..++
T Consensus 159 ~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 159 IFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLL 226 (229)
T ss_pred HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHH
Confidence 3344455554446679999997 667466666666 44444 2211 1114556665 4566666554
No 168
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=87.07 E-value=1.6 Score=43.04 Aligned_cols=98 Identities=15% Similarity=0.134 Sum_probs=73.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFP 571 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 571 (675)
.++.||+.+.+++|++.|+.+.+.|+-....+..+.+..|+...... .+.+.+ ..-.+-.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~--~v~~~d-----------------v~~~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDV--IVTADD-----------------VARGKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcch--hccHHH-----------------HhcCCCCC
Confidence 46789999999999999999999999999999999999998643111 000000 01123446
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccE
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGI 608 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgi 608 (675)
+-=..-.+.|.-....|+.+.|+.|.+.|-++|+.-+
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 6666666776556778999999999999999999854
No 169
>PLN02423 phosphomannomutase
Probab=83.82 E-value=1.4 Score=44.20 Aligned_cols=43 Identities=26% Similarity=0.255 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHhCCCEEEEECC----CccCHHHHHh-CCccEEcCCccH
Q 005830 572 EHKYEIVKRLQERKHICGMTGD----GVNDAPALKK-ADIGIAVADATD 615 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGD----g~ND~~al~~-A~vgia~~~~~~ 615 (675)
-+|..-++.|+ ....|+++|| |.||.+||+. .-.|+.+.+-.|
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 37999999999 7788999999 8999999997 556888864333
No 170
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=83.69 E-value=1.7 Score=43.01 Aligned_cols=80 Identities=21% Similarity=0.175 Sum_probs=53.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec-
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLA---IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV- 569 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~- 569 (675)
.=|++.+.++.+++.|++|+.+||++.. .+..--++.|+... . .++-|.
T Consensus 116 aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~----~-----------------------~l~lr~~ 168 (229)
T PF03767_consen 116 AIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW----D-----------------------HLILRPD 168 (229)
T ss_dssp EETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB----S-----------------------CGEEEEE
T ss_pred ccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc----c-----------------------hhccccc
Confidence 3478999999999999999999998753 33333445665321 0 011111
Q ss_pred -------CHHHHHHHHHHHHhCC-CEEEEECCCccCHHH
Q 005830 570 -------FPEHKYEIVKRLQERK-HICGMTGDGVNDAPA 600 (675)
Q Consensus 570 -------~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~a 600 (675)
..+-|..--+.+++.| ++++.+||..+|...
T Consensus 169 ~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 169 KDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp SSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 1234777788888885 467889999999875
No 171
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=82.32 E-value=2 Score=40.28 Aligned_cols=85 Identities=14% Similarity=0.044 Sum_probs=54.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcC-EEEecCH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKAD-GFAGVFP 571 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~r~~p 571 (675)
++.|++.++++ ++.++|.-+........+..|+... ++.++.... -..+-.|
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~--------------------fd~v~~~~~~~~~KP~p 142 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWY--------------------FDRAFSVDTVRAYKPDP 142 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHH--------------------HhhhccHhhcCCCCCCH
Confidence 47889999998 3689998888888888888887432 111110000 0123334
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHHHHHhC
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAPALKKA 604 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A 604 (675)
+-=....+.+.-....++||||+..|+.+-+++
T Consensus 143 ~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 143 VVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 433555566655567799999999998876543
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=81.32 E-value=2.7 Score=42.70 Aligned_cols=41 Identities=10% Similarity=0.046 Sum_probs=37.8
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 005830 494 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (675)
Q Consensus 494 lr-~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 534 (675)
+| |++.+++++|+++|+++.++|+-....+...-+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999988888889999999974
No 173
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=80.80 E-value=8.6 Score=38.70 Aligned_cols=30 Identities=13% Similarity=0.374 Sum_probs=26.5
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLA 521 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~ 521 (675)
.|.=|++.+..+.+++.|++|+.+||+...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 456679999999999999999999999864
No 174
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=80.63 E-value=7.6 Score=36.66 Aligned_cols=98 Identities=15% Similarity=0.221 Sum_probs=56.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhh------cCEEE
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEK------ADGFA 567 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~ 567 (675)
+.+++.+++..|+++|++++|+|.=+ ||.....+...+. .. .......++. ...+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rgyf~~~~f~------~~-~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRGYFTEADFD------KL-HNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------CccccCccHHHHH------HH-HHHHHHHHHHcCCccceEEEC
Confidence 46899999999999999999999633 2211100000000 00 0000011110 01244
Q ss_pred ecCHHH--------HHHHHHHHHhCC---CEEEEECCCccCHHHHHhCCccEEc
Q 005830 568 GVFPEH--------KYEIVKRLQERK---HICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 568 r~~p~~--------K~~iv~~l~~~~---~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
...|++ ...+.+.+++.+ ....+|||...|..+-..|++. .+
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 444442 244555555543 6789999999999999999887 44
No 175
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=80.08 E-value=48 Score=40.08 Aligned_cols=271 Identities=15% Similarity=0.085 Sum_probs=146.7
Q ss_pred CccccCHHHHHHHcCCC-CCCCCHHHHHHHHhhcCCCccCcccccHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCC
Q 005830 18 DLERIPIEEVFEQLKCS-REGLTSDEGAHRLHVFGPNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGRDP 96 (675)
Q Consensus 18 ~~~~~~~~~~~~~l~~~-~~GL~~~e~~~r~~~~G~N~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 96 (675)
..+.++-+|..+++... .+.+..++-... ...++.+|..-+...+...-.+...+....... .
T Consensus 41 ~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~------------~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~ 104 (917)
T COG0474 41 PTTGLSEEEVKRRLKKYGPNELPEEKKRSL------------LKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----V 104 (917)
T ss_pred cccCCCHHHHHHHHhhcCCccccccccCcH------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----c
Confidence 34567778888887754 333333222222 222333343333333322222233333221100 1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCe------EEE----EECCeEEEEEcCCccCCcEEEecCCCe
Q 005830 97 DWQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPK------TKV----LRDGRWSEQDASILVPGDVISIKLGDI 166 (675)
Q Consensus 97 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~V----~r~g~~~~i~~~~L~~GDiv~l~~G~~ 166 (675)
.+...+.++++..+..+...++..++-++++++....... ..+ +.-|....+...|.+|-|...++..+
T Consensus 105 ~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~- 183 (917)
T COG0474 105 DAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD- 183 (917)
T ss_pred ceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-
Confidence 3334444455555555778888878877777776543322 222 23588899999999999999999887
Q ss_pred eeeeEEEEecCCeeEeeccc--cCCCcccc---c---CCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccCCC
Q 005830 167 VPADARLLEGDPLKIDQSAL--TGESLPVT---K---NPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQV 238 (675)
Q Consensus 167 iPaD~~vl~g~~~~Vdes~L--TGEs~pv~---K---~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~~ 238 (675)
.-+|=-.|.|++.-|+-... +.|..|.. + ..|..+.+|+-..--..+|.-+..|+.+..-...+. ..+.-.
T Consensus 184 l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~-~~t~l~ 262 (917)
T COG0474 184 LEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKE-VKTPLQ 262 (917)
T ss_pred ceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccc-cCCcHH
Confidence 56676677775543333222 22333333 3 458888888844433445556666665544332211 222222
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 005830 239 GHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (675)
Q Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~ 306 (675)
..+.+....+..+.+...++.++...+.........+..++..++++.--++|..+-+++.++...-+
T Consensus 263 ~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ma 330 (917)
T COG0474 263 RKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 23444555555444433333333333321211234566777788888888999988888888876544
No 176
>PRK10444 UMP phosphatase; Provisional
Probab=79.33 E-value=2.1 Score=43.01 Aligned_cols=48 Identities=23% Similarity=0.349 Sum_probs=41.3
Q ss_pred EEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh---CC
Q 005830 485 VGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL---GM 532 (675)
Q Consensus 485 lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~---gi 532 (675)
=|++.-.+.+-|++.++++.|++.|++++++|+....+...+++++ |+
T Consensus 9 DGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 9 DGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 3677777888999999999999999999999999988877777764 66
No 177
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=79.21 E-value=66 Score=39.12 Aligned_cols=201 Identities=14% Similarity=0.113 Sum_probs=99.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc------CCCeEEE----EECCeEEEEEcCCccCCcEEEecCCCeee
Q 005830 99 QDFVGIIVLLVINSTISFIEENNAGNAAAALMAN------LAPKTKV----LRDGRWSEQDASILVPGDVISIKLGDIVP 168 (675)
Q Consensus 99 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~V----~r~g~~~~i~~~~L~~GDiv~l~~G~~iP 168 (675)
...+++++.++++.+.++.+++..++..+..... ......+ +.-|....+...|.+|.|.+.++ |+..-
T Consensus 133 ~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~ 211 (941)
T TIGR01517 133 AILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLE 211 (941)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEE
Confidence 3344555556667777777776665544333221 1112222 23588899999999999999885 44455
Q ss_pred eeEEEEecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhccCCCCchHHHHHHH
Q 005830 169 ADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAI 248 (675)
Q Consensus 169 aD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~~~~~~~~~~~~~~ 248 (675)
+|=-.|.|++.-|+-. .|+..- -..|..+..|+-..-=...+.-+..|.-... +......+.-...+.+..+.+
T Consensus 212 VdES~LTGES~pv~K~--~~~~n~--v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~--~~~~~~~t~l~~~~~~~~~~~ 285 (941)
T TIGR01517 212 IDESSITGESDPIKKG--APKDSF--LLSGTVVNEGSGRMLVTAVGVNSFGGKLMME--LRAEGEDTPLQEKLSELAGLI 285 (941)
T ss_pred EEecccCCCCCccccc--CCCCce--EEeCCeEEeeEEEEEEEEeCCCcHHHHHHHh--hccCCCCCcHHHHHHHHHHHH
Confidence 6666666754333222 122211 2457777777533221122222222321111 001011112112233333333
Q ss_pred HHHHHH---HHHHHHHHHHHHH------------HhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 005830 249 GNFCIC---SIAVGIVAEIIIM------------YPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (675)
Q Consensus 249 ~~~~~~---~i~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~ 306 (675)
..+.+. ++++..++.+++. .......+..++..++..+.+++|.++++++..+.....
T Consensus 286 ~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 286 GKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 333211 1111111111110 011223455667777888888999999999988876554
No 178
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=79.21 E-value=0.95 Score=42.15 Aligned_cols=41 Identities=15% Similarity=0.059 Sum_probs=37.1
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
=..||++.+.++.|.+. +++++.|......|..+...++..
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 35799999999999987 999999999999999999998864
No 179
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=79.08 E-value=3.5 Score=38.03 Aligned_cols=90 Identities=27% Similarity=0.386 Sum_probs=60.5
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCH----HHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQL----AIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
+++-+++.|..-++.|=+++.+||+.. .++..+|+...|.. +.+ .+|+.-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~-m~p-------------------------v~f~Gd 168 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITN-MNP-------------------------VIFAGD 168 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCC-Ccc-------------------------eeeccC
Confidence 466788889999999999999999985 45566777777632 111 123322
Q ss_pred CHH-HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc-cEEc
Q 005830 570 FPE-HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI-GIAV 610 (675)
Q Consensus 570 ~p~-~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v-gia~ 610 (675)
.|. .+..-...+|+.+ .-..-||+.||+.|-+.|++ ||-+
T Consensus 169 k~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 169 KPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 220 1122234555554 45678999999999999998 7776
No 180
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=79.06 E-value=7.2 Score=43.25 Aligned_cols=97 Identities=13% Similarity=0.039 Sum_probs=62.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-hCCCCCCCCCCCc-cCCccccccCcccHHHHhhhcCEEEe---
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRR-LGMGTNMYPSSSL-LGQDKDASIAALPVDELIEKADGFAG--- 568 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~r--- 568 (675)
+++++.+. +++.|.+ +++|+-....+..+|++ +|+..-....-.. .++ ..-.+
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G------------------~~TG~i~g 168 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSG------------------RATGFMKK 168 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCC------------------EEeeeecC
Confidence 56665554 4567754 99999999999999987 8986321111000 000 01111
Q ss_pred ---cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCC
Q 005830 569 ---VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVAD 612 (675)
Q Consensus 569 ---~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~ 612 (675)
+.-++|..-++..........+.||+.||.|||+.|+-+.+++.
T Consensus 169 ~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 169 PGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 23467877776433212223789999999999999999999974
No 181
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=78.93 E-value=3.6 Score=41.81 Aligned_cols=41 Identities=5% Similarity=-0.084 Sum_probs=36.8
Q ss_pred CC-cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 005830 494 PR-HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (675)
Q Consensus 494 lr-~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 534 (675)
+| |++.+++++|+++|+++.++|+.+...+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 45 899999999999999999999888788889999999964
No 182
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=78.61 E-value=8.8 Score=39.19 Aligned_cols=48 Identities=23% Similarity=0.236 Sum_probs=36.0
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHH---HHHHhCCC
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKE---TGRRLGMG 533 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~---ia~~~gi~ 533 (675)
|++.-.+.+=+++.++|++|++.|++++++|+....+... --+.+|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 5555567777899999999999999999999976543333 23456764
No 183
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=77.89 E-value=1.9 Score=34.11 Aligned_cols=55 Identities=31% Similarity=0.373 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCc-cEEcCC---ccHHH---HhccCEEe
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDG-VNDAPALKKADI-GIAVAD---ATDAA---RSASDIVL 625 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~v-gia~~~---~~~~a---~~~ad~vl 625 (675)
|.-=..+.+.+......++||||. ..|+.+-+++++ +|.+.. ..+.. ...+|+|+
T Consensus 7 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv 69 (75)
T PF13242_consen 7 PGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVV 69 (75)
T ss_dssp HHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEE
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEE
Confidence 444445556665555679999999 999999999998 444432 22222 25789987
No 184
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=75.40 E-value=5.1 Score=40.21 Aligned_cols=49 Identities=6% Similarity=-0.033 Sum_probs=39.6
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHhCCCC
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIGKETGRRLGMGT 534 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TG---d~~~~a~~ia~~~gi~~ 534 (675)
|++.-.+.+=+++.++|++|++.|++++++|| ..........+.+|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 55555667778999999999999999999996 66777777777888753
No 185
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=75.35 E-value=53 Score=38.82 Aligned_cols=193 Identities=15% Similarity=0.080 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhcC------CCeEEE----EECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEE
Q 005830 105 IVLLVINSTISFIEENNAGNAAAALMANL------APKTKV----LRDGRWSEQDASILVPGDVISIKLGDIVPADARLL 174 (675)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~V----~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl 174 (675)
+++......+......+.-+++.++.... .....+ +.-|....+...|.+|-|-+.++ |+..-+|=-.+
T Consensus 65 ~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~-g~~~~VDeS~L 143 (755)
T TIGR01647 65 LLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE-GDYIQVDQAAL 143 (755)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe-cCceEEEcccc
Confidence 33333444455556656656666553321 112222 23578899999999999999885 43344566666
Q ss_pred ecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc-CCCCchHHHHHHHHHHHH
Q 005830 175 EGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCI 253 (675)
Q Consensus 175 ~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 253 (675)
.|++.-|+-. .|+ .-..|..+-+|+-..-=...+.-+..|.-..+ +.+..... .-.....+....+..+.+
T Consensus 144 TGES~PV~K~--~~~----~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~l--v~~~~~~~~~lq~~~~~i~~~~~~~~~ 215 (755)
T TIGR01647 144 TGESLPVTKK--TGD----IAYSGSTVKQGEAEAVVTATGMNTFFGKAAAL--VQSTETGSGHLQKILSKIGLFLIVLIG 215 (755)
T ss_pred cCCccceEec--cCC----eeeccCEEEccEEEEEEEEcCCccHHHHHHHH--hhccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 6654333332 121 12356666666543322222223333321111 11111111 111223344444444433
Q ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 005830 254 CSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (675)
Q Consensus 254 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~ 306 (675)
.+.++.+++.++.........+..++..++..+.+++|.++++++..+.....
T Consensus 216 ~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~a 268 (755)
T TIGR01647 216 VLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELA 268 (755)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHH
Confidence 33333233222211111223455677788888999999999999988876544
No 186
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=74.50 E-value=7.5 Score=43.37 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=32.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHhCCC
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQL------------AIGKETGRRLGMG 533 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~------------~~a~~ia~~~gi~ 533 (675)
+-|++.+.|+.|++.|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999997443 3456677777764
No 187
>PTZ00445 p36-lilke protein; Provisional
Probab=74.34 E-value=15 Score=35.48 Aligned_cols=62 Identities=13% Similarity=0.253 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEE-----Ee-------cccCCCCcchHHHHHHHHhCCCeE
Q 005830 445 RKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVG-----LL-------PLFDPPRHDSAETIRRALNLGVNV 512 (675)
Q Consensus 445 ~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG-----~i-------~~~d~lr~~~~~~i~~l~~~gi~v 512 (675)
.+..+..++.+.+.|.|++++-... |+++ .. .+--.++|+.+.-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 3445566777889999999887654 4443 11 112237999999999999999999
Q ss_pred EEEc-CCC
Q 005830 513 KMIT-GDQ 519 (675)
Q Consensus 513 ~~~T-Gd~ 519 (675)
.++| .|.
T Consensus 95 ~VVTfSd~ 102 (219)
T PTZ00445 95 SVVTFSDK 102 (219)
T ss_pred EEEEccch
Confidence 9999 444
No 188
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=71.60 E-value=2.6e+02 Score=34.60 Aligned_cols=34 Identities=24% Similarity=0.438 Sum_probs=19.3
Q ss_pred CCcEEEecCCCeeeeeEEEEe---cCCeeEeeccccC
Q 005830 155 PGDVISIKLGDIVPADARLLE---GDPLKIDQSALTG 188 (675)
Q Consensus 155 ~GDiv~l~~G~~iPaD~~vl~---g~~~~Vdes~LTG 188 (675)
-|....+...|.+|-|.++++ |..+-.|=-.+.|
T Consensus 236 dg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g 272 (1054)
T TIGR01657 236 NGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSG 272 (1054)
T ss_pred CCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeC
Confidence 456666666666666666665 3333344444444
No 189
>PTZ00174 phosphomannomutase; Provisional
Probab=69.90 E-value=6.8 Score=39.22 Aligned_cols=42 Identities=19% Similarity=0.263 Sum_probs=33.3
Q ss_pred EEecccC-CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 005830 486 GLLPLFD-PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 527 (675)
Q Consensus 486 G~i~~~d-~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia 527 (675)
|.+.=.| ++.+.+.++|+++++.|++++++||++........
T Consensus 14 GTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 14 GTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 4444443 48899999999999999999999999988654433
No 190
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=69.80 E-value=5.4 Score=35.29 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=28.2
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHH
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIG 523 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a 523 (675)
+++.+++.++++.+++.|+.++++||++....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 56888999999999999999999999987543
No 191
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=67.86 E-value=12 Score=37.08 Aligned_cols=133 Identities=14% Similarity=0.100 Sum_probs=65.3
Q ss_pred CCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCc--ccHHHHhhhcCEEEec
Q 005830 492 DPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAA--LPVDELIEKADGFAGV 569 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~r~ 569 (675)
-.+|+++.+.++.|++.+|.+.+.|+.=......+-++.|...+. -.+.+....-..++ ..+.. .+.
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~N---v~VvSN~M~Fd~~g~l~gF~~-----~lI--- 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPN---VKVVSNFMDFDEDGVLVGFKG-----PLI--- 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTT---EEEEEE-EEE-TTSBEEEE-S-----S-----
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCC---eEEEeeeEEECCcceEeecCC-----Cce---
Confidence 357999999999999999999999987777777777776654321 11111100000000 00000 000
Q ss_pred CHHHHHH-------HHHHHHhCCCEEEEECCCccCHHHHHhC---CccEEcC--Ccc-H----HHHhccCEEecCCChhH
Q 005830 570 FPEHKYE-------IVKRLQERKHICGMTGDGVNDAPALKKA---DIGIAVA--DAT-D----AARSASDIVLTEPGLSV 632 (675)
Q Consensus 570 ~p~~K~~-------iv~~l~~~~~~v~~iGDg~ND~~al~~A---~vgia~~--~~~-~----~a~~~ad~vl~~~~~~~ 632 (675)
.+-.|-. .-+.++ ....|+..||..-|+.|-.-. +.-+.+| +.. + .-.++=|+|+.+|.--.
T Consensus 158 H~~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 158 HTFNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp -TT-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EEeeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 0111211 112222 245799999999999997554 3333444 322 2 34467799999875444
Q ss_pred HHHH
Q 005830 633 IISA 636 (675)
Q Consensus 633 i~~~ 636 (675)
++..
T Consensus 237 v~~~ 240 (246)
T PF05822_consen 237 VPNA 240 (246)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 192
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=65.33 E-value=20 Score=35.35 Aligned_cols=103 Identities=18% Similarity=0.181 Sum_probs=62.2
Q ss_pred CcchHHHHHHHHhCCCeEEEEcC-CCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCE-EEecCHH
Q 005830 495 RHDSAETIRRALNLGVNVKMITG-DQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADG-FAGVFPE 572 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TG-d~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~r~~p~ 572 (675)
=++..++++.||++|..+.++|. |.... .+-..+|+... ++..+....+ .-+-.|.
T Consensus 115 ~~~~~~~lq~lR~~g~~l~iisN~d~r~~--~~l~~~~l~~~--------------------fD~vv~S~e~g~~KPDp~ 172 (237)
T KOG3085|consen 115 LDGMQELLQKLRKKGTILGIISNFDDRLR--LLLLPLGLSAY--------------------FDFVVESCEVGLEKPDPR 172 (237)
T ss_pred ccHHHHHHHHHHhCCeEEEEecCCcHHHH--HHhhccCHHHh--------------------hhhhhhhhhhccCCCChH
Confidence 34566999999999988888883 44322 44455555311 1111111111 1122344
Q ss_pred HHHHHHHHHHhCCCEEEEECCC-ccCHHHHHhCCc-cEEcCCccHHHHh
Q 005830 573 HKYEIVKRLQERKHICGMTGDG-VNDAPALKKADI-GIAVADATDAARS 619 (675)
Q Consensus 573 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~al~~A~v-gia~~~~~~~a~~ 619 (675)
==...++.+..+...|+++||. .||...-+.++. ++-+.+.....++
T Consensus 173 If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~ 221 (237)
T KOG3085|consen 173 IFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKE 221 (237)
T ss_pred HHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhh
Confidence 3455667777778889999998 799999888887 4444454444443
No 193
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=64.18 E-value=8.4 Score=38.93 Aligned_cols=47 Identities=23% Similarity=0.235 Sum_probs=39.9
Q ss_pred EEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh
Q 005830 484 LVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL 530 (675)
Q Consensus 484 ~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 530 (675)
+=|++.--+.+=|++.++|+.|+++|++++.+|..+..+...+++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34888888999999999999999999999999998877777555543
No 194
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=63.53 E-value=3.3e+02 Score=32.83 Aligned_cols=198 Identities=14% Similarity=0.062 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCe------------EEE----EECCeEEEEEcCCccCCcEEEecCCC
Q 005830 102 VGIIVLLVINSTISFIEENNAGNAAAALMANLAPK------------TKV----LRDGRWSEQDASILVPGDVISIKLGD 165 (675)
Q Consensus 102 ~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~V----~r~g~~~~i~~~~L~~GDiv~l~~G~ 165 (675)
+++++..+++...+...+ ++.++++++....... ..+ +.-|....+...|.+|-|.+.++ |+
T Consensus 96 ~iv~~~~~i~~~~e~~a~-ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~-g~ 173 (867)
T TIGR01524 96 LMVLASGLLGFIQESRAE-RAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVIS-AR 173 (867)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEe-cC
Confidence 344444455555555554 6666666665433222 222 23478899999999999998886 44
Q ss_pred eeeeeEEEEecCCeeEeecccc--CCCccc-----ccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhcc-CC
Q 005830 166 IVPADARLLEGDPLKIDQSALT--GESLPV-----TKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 237 (675)
Q Consensus 166 ~iPaD~~vl~g~~~~Vdes~LT--GEs~pv-----~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~~-~~ 237 (675)
-+-+|=-.+.|++.-|+-..-+ .+..|. .-..|..+.+|+-..-=...+.=+..|.=.. .+.. .+.. .-
T Consensus 174 ~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~--~v~~-~~~~t~l 250 (867)
T TIGR01524 174 DLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAI--AATE-RRGQTAF 250 (867)
T ss_pred ceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHH--HhhC-CCCCCcH
Confidence 4556777777765434332211 011111 1357888888865443233333333343221 1112 2222 11
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 005830 238 VGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305 (675)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~ 305 (675)
.....+....+..+.+.+.++.+++..+... .....+..++..++..+.+++|.++++++..+....
T Consensus 251 q~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m 317 (867)
T TIGR01524 251 DKGVKSVSKLLIRFMLVMVPVVLMINGLMKG-DWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM 317 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheehHHHhcC-CHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 1223333333433322222222222222111 112345556777888888999999999998876443
No 195
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=60.74 E-value=37 Score=35.73 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=34.2
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHh-C
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRL-G 531 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~-g 531 (675)
-|++.+.++.|+++|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 479999999999999999999999999999988886 6
No 196
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=60.49 E-value=2.3e+02 Score=34.28 Aligned_cols=193 Identities=11% Similarity=-0.009 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhcCC-----CeEEEE-----ECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCe
Q 005830 110 INSTISFIEENNAGNAAAALMANLA-----PKTKVL-----RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPL 179 (675)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~V~-----r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~ 179 (675)
+...+..+...+.-+++.++....- .+...+ .-|....+...|.+|-|.+.++.. ..=+|=-.+.|++.
T Consensus 95 ~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~-~l~VDES~LTGES~ 173 (884)
T TIGR01522 95 TVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAV-DLSIDESNLTGETT 173 (884)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcC-ceEEEcccccCCCc
Confidence 3334444455566666666643221 222222 247889999999999999988743 33466666666543
Q ss_pred eEeeccc--cCCC-cc--c---ccCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhhc-cCCCCchHHHHHHHHH
Q 005830 180 KIDQSAL--TGES-LP--V---TKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTAIGN 250 (675)
Q Consensus 180 ~Vdes~L--TGEs-~p--v---~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~~-~~~~~~~~~~~~~~~~ 250 (675)
-|+-..- .++. .+ - .-..|..+.+|+-..-=...+.-+..|.-... +.+.... +.-...+.+....+..
T Consensus 174 pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~--v~~~~~~kt~lq~~l~~l~~~~~~ 251 (884)
T TIGR01522 174 PVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKM--MQAIEKPKTPLQKSMDLLGKQLSL 251 (884)
T ss_pred ceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHH--hccCCCCCCcHHHHHHHHHHHHHH
Confidence 3333221 1111 00 0 12467788777643322223333333422111 1111111 2212234444444444
Q ss_pred HHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Q 005830 251 FCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 306 (675)
Q Consensus 251 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~ 306 (675)
..+.++++.+++.++.... ....+..++...++.+.+++|.++++++..+.....
T Consensus 252 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~a 306 (884)
T TIGR01522 252 VSFGVIGVICLVGWFQGKD-WLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMS 306 (884)
T ss_pred HHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHh
Confidence 4322222223333332211 123345566677888889999999999998876554
No 197
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=58.29 E-value=61 Score=31.69 Aligned_cols=193 Identities=14% Similarity=0.116 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCC-eeEeecc
Q 005830 107 LLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDP-LKIDQSA 185 (675)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~-~~Vdes~ 185 (675)
++++..+..+.+.+...+..+.+.+....... +... -++-|....+...|.+|-|.+.++.++ +-.|=-.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~----v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~l 72 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----KKVT----VIRDGRWQKIPSSELVPGDIIILKAGDIVPADGIL 72 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----EEEE----EEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----ccEE----EEeccccccchHhhccceeeeecccccccccCccc
Confidence 34455555556666666666666654443321 1122 233367778888888888888885422 2233333
Q ss_pred cc-CCCccccc-CCCCc---------cccceeeeeceEEEEEEEecchhhhhhhh---hhhhccCCCCchHHHHHHHHHH
Q 005830 186 LT-GESLPVTK-NPYDE---------VFSGSTCKQGEIEAVVIATGVHTFFGKAA---HLVDSTNQVGHFQKVLTAIGNF 251 (675)
Q Consensus 186 LT-GEs~pv~K-~~~~~---------v~aGt~v~~g~~~~~V~~tG~~T~~g~~~---~~~~~~~~~~~~~~~~~~~~~~ 251 (675)
+. |...--.- -.|+. ...|..+..|....-=...|.-+..|.-. ++.+...+........++....
T Consensus 73 l~~g~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (230)
T PF00122_consen 73 LESGSAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNK 152 (230)
T ss_dssp EESSEEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHH
T ss_pred eeccccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHH
Confidence 33 32111000 00111 11566666665332111122222223221 1222223444433444444444
Q ss_pred HHHHHHHHHHHHHHHHHhcccc-chHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHH
Q 005830 252 CICSIAVGIVAEIIIMYPVQHR-KYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 308 (675)
Q Consensus 252 ~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~~~~ 308 (675)
+...+...+++..++.+..... .....+...+...+..+=...|.+++++...+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~ 210 (230)
T PF00122_consen 153 IAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAI 210 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHH
T ss_pred HHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHHHHHH
Confidence 3333333333323333322211 12233344555556666667777777777766544
No 198
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=57.24 E-value=7.7 Score=38.66 Aligned_cols=92 Identities=18% Similarity=0.138 Sum_probs=51.8
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHh----hhcCEEEecC
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELI----EKADGFAGVF 570 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~r~~ 570 (675)
-++..++++.+++.|++. ++|+.....+.......|.. .+...+ .+.....+-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------------------~~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------------------YYAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------------------HHHHHHHHhCCcEecCCCCC
Confidence 478899999998899997 66765543322211111110 111111 0111123334
Q ss_pred HHHHHHHHHHHHhC-CCEEEEECCC-ccCHHHHHhCCccE
Q 005830 571 PEHKYEIVKRLQER-KHICGMTGDG-VNDAPALKKADIGI 608 (675)
Q Consensus 571 p~~K~~iv~~l~~~-~~~v~~iGDg-~ND~~al~~A~vgi 608 (675)
|+-=..+.+.+... ...++||||. .+|..+-+.|++-.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 44334455555422 3479999999 59999999888743
No 199
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=56.87 E-value=3.3e+02 Score=33.08 Aligned_cols=196 Identities=13% Similarity=0.032 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCC------------CeEEE----EECCeEEEEEcCCccCCcEEEecCCCe
Q 005830 103 GIIVLLVINSTISFIEENNAGNAAAALMANLA------------PKTKV----LRDGRWSEQDASILVPGDVISIKLGDI 166 (675)
Q Consensus 103 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~V----~r~g~~~~i~~~~L~~GDiv~l~~G~~ 166 (675)
.++++..+...+......++.+++.++..... ....+ +.-|....+...|.+|-|.+.++.. -
T Consensus 119 ~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~-~ 197 (903)
T PRK15122 119 TMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESR-D 197 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcC-c
Confidence 33333444445555555566666666643221 11222 2348889999999999999988643 3
Q ss_pred eeeeEEEEecCCeeEeeccc------------cCCCcc-----cccCCCCccccceeeeeceEEEEEEEecchhhhhhhh
Q 005830 167 VPADARLLEGDPLKIDQSAL------------TGESLP-----VTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA 229 (675)
Q Consensus 167 iPaD~~vl~g~~~~Vdes~L------------TGEs~p-----v~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~ 229 (675)
+-+|=-.|.|++.-|+-... .++..+ -.-..|..+.+|+-..-=...+.=+..|.=... +.
T Consensus 198 l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~--v~ 275 (903)
T PRK15122 198 LFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKS--IV 275 (903)
T ss_pred eEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHH--hc
Confidence 45576666665544444321 122211 124568888888754332223333333322211 11
Q ss_pred hhhhcc-C---CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 005830 230 HLVDST-N---QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305 (675)
Q Consensus 230 ~~~~~~-~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~ 305 (675)
. .+.. . +...+.+.+..++.++.+++++... +.. ......+..++..++..+.+++|..+++++..+....
T Consensus 276 ~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~~-~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m 350 (903)
T PRK15122 276 G-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FTK-GDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM 350 (903)
T ss_pred C-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hcc-CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 1 1111 1 1133445555554443332222111 111 1112334556777888888999999999988876544
Q ss_pred H
Q 005830 306 S 306 (675)
Q Consensus 306 ~ 306 (675)
+
T Consensus 351 a 351 (903)
T PRK15122 351 A 351 (903)
T ss_pred H
Confidence 3
No 200
>PLN02151 trehalose-phosphatase
Probab=56.56 E-value=23 Score=37.28 Aligned_cols=63 Identities=19% Similarity=0.153 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhC-C------CEEEEECCCccCHHHHHhC-----CccEEcCCccHHHHhccCEEecCCChhHHHHHHH
Q 005830 572 EHKYEIVKRLQER-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAVL 638 (675)
Q Consensus 572 ~~K~~iv~~l~~~-~------~~v~~iGDg~ND~~al~~A-----~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~ 638 (675)
-+|...++.+.+. + ..++++||...|-.|++.. ++||.++.+.. ...|++.+ ++-+.+.+++.
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L--~dp~eV~~~L~ 342 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSL--QEPDEVMEFLE 342 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeC--CCHHHHHHHHH
Confidence 3898888887654 1 2489999999999999853 56777763321 23688988 55677766664
No 201
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=56.07 E-value=64 Score=33.68 Aligned_cols=50 Identities=18% Similarity=0.201 Sum_probs=39.5
Q ss_pred EEEEecccCCCCcchHHHHHHHHhC----CCeEEEEcCCC---HH-HHHHHHHHhCCC
Q 005830 484 LVGLLPLFDPPRHDSAETIRRALNL----GVNVKMITGDQ---LA-IGKETGRRLGMG 533 (675)
Q Consensus 484 ~lG~i~~~d~lr~~~~~~i~~l~~~----gi~v~~~TGd~---~~-~a~~ia~~~gi~ 533 (675)
+=|++.-.+++-+++.++++.|+.. |+++..+|... .. .+..+.+++|+.
T Consensus 7 ~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 7 IDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 3478888899999999999999998 99999999665 33 245555777874
No 202
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=55.06 E-value=72 Score=35.64 Aligned_cols=148 Identities=18% Similarity=0.154 Sum_probs=87.6
Q ss_pred ECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCCccccceeeeeceE--------
Q 005830 141 RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEI-------- 212 (675)
Q Consensus 141 r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~-------- 212 (675)
+-|....+...|.+|-|.+.++- ..=+|--.+.|++.-+.-.. |+. ...|..++.|+....-..
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~----v~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDA----VFAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCc----cccCcEEeccEEEEEEEEeccccHHH
Confidence 45888999999999999998866 45567777777654344322 443 256888999987654222
Q ss_pred -EEEEEEecchhhhhhhhhhhhccCCCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHh--ccccchHHHHHHHHHHHHH
Q 005830 213 -EAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVL-TAIGNFCICSIAVGIVAEIIIMYP--VQHRKYRDGIDNLLVLLIG 288 (675)
Q Consensus 213 -~~~V~~tG~~T~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~ 288 (675)
.+.++++|.++. +.-.....+.. ..+..+.+.+.++.+++.....+. .+...+..++..++..+.+
T Consensus 125 ~i~~~v~~~~~~k----------~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~ 194 (499)
T TIGR01494 125 KIAVVVYTGFETK----------TPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPI 194 (499)
T ss_pred HHHHHHHhcCCCC----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCC
Confidence 233445555542 11011122222 334433332222222222222221 1234567778888888999
Q ss_pred hccCcchHHHHHHHHHHH
Q 005830 289 GIPIAMPTVLSVTMAIGS 306 (675)
Q Consensus 289 ~iP~~l~~~~~~~~~~~~ 306 (675)
++|.++|++...+.....
T Consensus 195 aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 195 ALPLAVTIALAVGDARLA 212 (499)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 999999999998876654
No 203
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=54.50 E-value=4.7e+02 Score=31.72 Aligned_cols=160 Identities=13% Similarity=0.028 Sum_probs=81.4
Q ss_pred ECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeecccc---CCCccc----ccCCCCccccceeeeeceEE
Q 005830 141 RDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALT---GESLPV----TKNPYDEVFSGSTCKQGEIE 213 (675)
Q Consensus 141 r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LT---GEs~pv----~K~~~~~v~aGt~v~~g~~~ 213 (675)
.-|....+..-|.+|-|.+.++ |+-+-+|=-.+.|++.-|+-..-+ .+..+. .-..|..+.+|+-..-=...
T Consensus 184 vpGDiV~l~~Gd~IPaDg~li~-g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~at 262 (902)
T PRK10517 184 VPGDIIKLAAGDMIPADLRILQ-ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIAT 262 (902)
T ss_pred CCCCEEEECCCCEEeeeEEEEE-cCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEe
Confidence 3488899999999999998886 444556767777755444433211 111111 13478888888754433333
Q ss_pred EEEEEecchhhhhhhhhhhhcc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccC
Q 005830 214 AVVIATGVHTFFGKAAHLVDST-NQVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPI 292 (675)
Q Consensus 214 ~~V~~tG~~T~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~ 292 (675)
+.=+..|.-.. .+.+..... .-.....+....+..+.+.+..+.+++..+... .....+..++..++.....++|.
T Consensus 263 G~~T~~GkI~~--~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~-~~~~~l~~alsv~V~~~Pe~LP~ 339 (902)
T PRK10517 263 GANTWFGQLAG--RVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG-DWWEAALFALSVAVGLTPEMLPM 339 (902)
T ss_pred ccccHHHHHHH--HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC-CHHHHHHHHHHHHHHHcccHHHH
Confidence 33333342221 111111222 111223333333333322222221222111111 11233455667778888889999
Q ss_pred cchHHHHHHHHH
Q 005830 293 AMPTVLSVTMAI 304 (675)
Q Consensus 293 ~l~~~~~~~~~~ 304 (675)
.+++++..+...
T Consensus 340 ~vt~~la~g~~~ 351 (902)
T PRK10517 340 IVTSTLARGAVK 351 (902)
T ss_pred HHHHHHHHHHHH
Confidence 999888887543
No 204
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=54.06 E-value=1e+02 Score=25.04 Aligned_cols=24 Identities=25% Similarity=0.307 Sum_probs=10.8
Q ss_pred HHHhHHHHHHHHHhcCCCeEEEEE
Q 005830 118 EENNAGNAAAALMANLAPKTKVLR 141 (675)
Q Consensus 118 ~~~~~~~~~~~l~~~~~~~~~V~r 141 (675)
-.+|+++..+++.+...+--+|+-
T Consensus 23 pqkK~~k~~~~m~~~L~~Gd~VvT 46 (84)
T TIGR00739 23 PQRKRRKAHKKLIESLKKGDKVLT 46 (84)
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEE
Confidence 334444444455544444444443
No 205
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=52.95 E-value=56 Score=33.63 Aligned_cols=45 Identities=20% Similarity=0.277 Sum_probs=30.8
Q ss_pred ccCCCCcchHHHHHHHHhC-CCeE---EEEcCCCHHH------HHHHHHHhCCCC
Q 005830 490 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------GKETGRRLGMGT 534 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~-gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 534 (675)
+..+++++.++.++.+++. |++. +++-||++.. ....|+++||..
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~ 64 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMAS 64 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456778888999998876 6653 4455777643 355677888853
No 206
>PRK11507 ribosome-associated protein; Provisional
Probab=51.96 E-value=18 Score=28.19 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=23.1
Q ss_pred EEEECCeEEEEEcCCccCCcEEEecC
Q 005830 138 KVLRDGRWSEQDASILVPGDVISIKL 163 (675)
Q Consensus 138 ~V~r~g~~~~i~~~~L~~GDiv~l~~ 163 (675)
.|..||+...-.-+.|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57789999999999999999999854
No 207
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=51.95 E-value=4.8e+02 Score=32.07 Aligned_cols=201 Identities=11% Similarity=0.055 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcC------CCeEEE----EECCeEEEEEcCCccCCcEEEecCCCeeeee
Q 005830 101 FVGIIVLLVINSTISFIEENNAGNAAAALMANL------APKTKV----LRDGRWSEQDASILVPGDVISIKLGDIVPAD 170 (675)
Q Consensus 101 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~V----~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD 170 (675)
.++++++..+..........+.-+++..+.... .....+ +.-|....+...+.+|.|.+.++... +=+|
T Consensus 110 i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~Vd 188 (997)
T TIGR01106 110 LSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVD 188 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEE
Confidence 444455555555666666666666666553221 112222 23588899999999999999997643 4456
Q ss_pred EEEEecCCeeEeeccccCCCcccc----cCCCCccccceeeeeceEEEEEEEecchhhhhhhhhhhh-ccCCCCchHHHH
Q 005830 171 ARLLEGDPLKIDQSALTGESLPVT----KNPYDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVD-STNQVGHFQKVL 245 (675)
Q Consensus 171 ~~vl~g~~~~Vdes~LTGEs~pv~----K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~g~~~~~~~-~~~~~~~~~~~~ 245 (675)
=-.|.|++.-|.-..-..+..|.. -..|..+.+|+-..-=...|.=+..|.-...-+ +... ...-...+.+..
T Consensus 189 eS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~--~~~~~~~pl~~~~~~~~ 266 (997)
T TIGR01106 189 NSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLAS--GLENGKTPIAIEIEHFI 266 (997)
T ss_pred ccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhh--hcccCCCcHHHHHHHHH
Confidence 666666543333221110111211 235677777753322122233344443222111 1111 111123345555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHHHHHHHHHH
Q 005830 246 TAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIG 305 (675)
Q Consensus 246 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~~~~~~~~~ 305 (675)
+.+..+.+++.++.+++..+..+.+ ...+..++...++.+..++|.++++++..+....
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m 325 (997)
T TIGR01106 267 HIITGVAVFLGVSFFILSLILGYTW-LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM 325 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH
Confidence 6666554333333222222222221 2344556666777788899999999888876543
No 208
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=49.17 E-value=92 Score=31.83 Aligned_cols=137 Identities=12% Similarity=0.167 Sum_probs=73.4
Q ss_pred ccCCCCcchHHHHHHHHhC-CCeE---EEEcCCCHHHH------HHHHHHhCCCCCCCCCC-------------------
Q 005830 490 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIG------KETGRRLGMGTNMYPSS------------------- 540 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~-gi~v---~~~TGd~~~~a------~~ia~~~gi~~~~~~~~------------------- 540 (675)
+.+.++++.++.++.+++. |++. .++.||++... ...|+++||........
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~ 89 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSEVVRLPETISQEELLDLIERYNQDP 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888888888776 6653 45668776543 45677888853211000
Q ss_pred Cc----cCCccc---------------c---ccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHh--CCCEEEEECC-Cc
Q 005830 541 SL----LGQDKD---------------A---SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGD-GV 595 (675)
Q Consensus 541 ~~----~~~~~~---------------~---~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGD-g~ 595 (675)
.+ .-.... + .++...+..+......|.-+||..=.++++...- .|..++++|- |.
T Consensus 90 ~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~i 169 (284)
T PRK14179 90 TWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNI 169 (284)
T ss_pred CCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 00 000000 0 1111122223333334677888776666665543 4889999999 44
Q ss_pred cCHH---HHHhCCccEEcC--Ccc--HHHHhccCEEec
Q 005830 596 NDAP---ALKKADIGIAVA--DAT--DAARSASDIVLT 626 (675)
Q Consensus 596 ND~~---al~~A~vgia~~--~~~--~~a~~~ad~vl~ 626 (675)
-=.| +|..++.-+.+. ... ...-..||+++.
T Consensus 170 vG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 170 VGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred CcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 3333 555666655552 222 222357898874
No 209
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=48.89 E-value=9.9 Score=29.21 Aligned_cols=28 Identities=32% Similarity=0.490 Sum_probs=15.6
Q ss_pred EEEECCeEEEEEcCCccCCcEEEecCCCe
Q 005830 138 KVLRDGRWSEQDASILVPGDVISIKLGDI 166 (675)
Q Consensus 138 ~V~r~g~~~~i~~~~L~~GDiv~l~~G~~ 166 (675)
.|..||+.+.-.-..|.|||+|.+ .|..
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~-~~~~ 61 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI-DGEE 61 (65)
T ss_dssp HHEETTB----SS----SSEEEEE-TTEE
T ss_pred ceEECCEEccccCCcCCCCCEEEE-CCEE
Confidence 366799988899999999999999 4443
No 210
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=48.86 E-value=1.6e+02 Score=25.24 Aligned_cols=44 Identities=11% Similarity=0.235 Sum_probs=19.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEE
Q 005830 98 WQDFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLR 141 (675)
Q Consensus 98 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r 141 (675)
|...+++++++++.-++.+...+|+++..+++.+...+--+|+-
T Consensus 18 ~~~ll~lvii~~i~yf~~~RpqkK~~k~~~~~~~~Lk~Gd~VvT 61 (106)
T PRK05585 18 LSSLLPLVVFFAIFYFLIIRPQQKRQKEHKKMLSSLAKGDEVVT 61 (106)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 44444333333333333334444555555555554444445543
No 211
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=48.71 E-value=1e+02 Score=31.23 Aligned_cols=31 Identities=6% Similarity=0.190 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCccCHHHH
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVNDAPAL 601 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al 601 (675)
+++-.++++.+++.-..-.++|-|+|+....
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~ 217 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQI 217 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHHH
Confidence 4555677888877655556679999865543
No 212
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=48.61 E-value=53 Score=30.38 Aligned_cols=57 Identities=14% Similarity=0.230 Sum_probs=43.1
Q ss_pred ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCH
Q 005830 441 REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 520 (675)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~ 520 (675)
+.....-+..+++.++..|--.++++... + -+++.++++..++.|++++.+||++-
T Consensus 92 Dy~yd~vFsRqveA~g~~GDvLigISTSG----------------------N--S~nVl~Ai~~Ak~~gm~vI~ltG~~G 147 (176)
T COG0279 92 DYGYDEVFSRQVEALGQPGDVLIGISTSG----------------------N--SKNVLKAIEAAKEKGMTVIALTGKDG 147 (176)
T ss_pred cccHHHHHHHHHHhcCCCCCEEEEEeCCC----------------------C--CHHHHHHHHHHHHcCCEEEEEecCCC
Confidence 44455566777788888886666665543 1 36899999999999999999999885
Q ss_pred H
Q 005830 521 A 521 (675)
Q Consensus 521 ~ 521 (675)
-
T Consensus 148 G 148 (176)
T COG0279 148 G 148 (176)
T ss_pred c
Confidence 3
No 213
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=48.36 E-value=32 Score=32.13 Aligned_cols=41 Identities=17% Similarity=0.206 Sum_probs=31.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHhCCC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMIT-GDQLAIGKETGRRLGMG 533 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~T-Gd~~~~a~~ia~~~gi~ 533 (675)
.+-|+++++++.|++.|+++.+.| -+.+..|+.+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 356899999999999999999999 58899999999999987
No 214
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=47.74 E-value=79 Score=32.49 Aligned_cols=138 Identities=13% Similarity=0.194 Sum_probs=74.5
Q ss_pred ccCCCCcchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCCCCC------------------
Q 005830 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGTNMYPSSS------------------ 541 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~-gi~---v~~~TGd~~~~a------~~ia~~~gi~~~~~~~~~------------------ 541 (675)
+.++++++.++.++.+++. |++ ++++.||++... ...|+++||.........
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNNDP 88 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456788888999999877 665 466678886443 456778888532111000
Q ss_pred -ccC----Ccc---------------cc---ccCcccHHHHhhhc--CEEEecCHHHHHHHHHHHHh--CCCEEEEECCC
Q 005830 542 -LLG----QDK---------------DA---SIAALPVDELIEKA--DGFAGVFPEHKYEIVKRLQE--RKHICGMTGDG 594 (675)
Q Consensus 542 -~~~----~~~---------------~~---~~~~~~~~~~~~~~--~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg 594 (675)
+.| ... ++ .++...+..+..+. ..|.-+||..=.++++...- .|..|+++|-+
T Consensus 89 ~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS 168 (295)
T PRK14174 89 DVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPYGILELLGRYNIETKGKHCVVVGRS 168 (295)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHHHHHHHHHHhCCCCCCCEEEEECCC
Confidence 000 000 00 11111222222222 34667888876666666543 48899999998
Q ss_pred cc---CHH-HHH------hCCccEEcCCcc--HHHHhccCEEecC
Q 005830 595 VN---DAP-ALK------KADIGIAVADAT--DAARSASDIVLTE 627 (675)
Q Consensus 595 ~N---D~~-al~------~A~vgia~~~~~--~~a~~~ad~vl~~ 627 (675)
.. =.. ||. .|.|-++..... ...-..||+++..
T Consensus 169 ~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 169 NIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred CcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 43 122 333 355555554322 2234578998753
No 215
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=47.69 E-value=75 Score=32.44 Aligned_cols=138 Identities=17% Similarity=0.196 Sum_probs=73.0
Q ss_pred ccCCCCcchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHhCCCCCCCCCCC------------------
Q 005830 490 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAIG------KETGRRLGMGTNMYPSSS------------------ 541 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~-gi~---v~~~TGd~~~~a------~~ia~~~gi~~~~~~~~~------------------ 541 (675)
+.++++++.++-++.+++. |++ ..++-||++... ...|+++||.........
T Consensus 9 ~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (285)
T PRK14191 9 LSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDSDLHTLQENTTEAELLSLIKDLNTDQ 88 (285)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3456778888889998855 665 345568876544 456778888532111000
Q ss_pred -ccC----Ccc---------------c---cccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHh--CCCEEEEECCCcc
Q 005830 542 -LLG----QDK---------------D---ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN 596 (675)
Q Consensus 542 -~~~----~~~---------------~---~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N 596 (675)
+.| ... + +.++...+..+..+...|.-+||..=.++++..+- .|..|+.+|.|..
T Consensus 89 ~V~GIlvq~PlP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~ 168 (285)
T PRK14191 89 NIDGILVQLPLPRHIDTKMVLEAIDPNKDVDGFHPLNIGKLCSQLDGFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNI 168 (285)
T ss_pred CCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCch
Confidence 000 000 0 01111122223333334667888777777776653 3889999999822
Q ss_pred ----CHHHHHh--CCccEEcCCccHH--HHhccCEEecC
Q 005830 597 ----DAPALKK--ADIGIAVADATDA--ARSASDIVLTE 627 (675)
Q Consensus 597 ----D~~al~~--A~vgia~~~~~~~--a~~~ad~vl~~ 627 (675)
=+.+|.. |.|-++-....+. .-..||+++..
T Consensus 169 VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 169 VGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVG 207 (285)
T ss_pred hHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEe
Confidence 2234444 4444433322222 23578888643
No 216
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=46.30 E-value=21 Score=36.37 Aligned_cols=42 Identities=14% Similarity=0.018 Sum_probs=30.4
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCccE
Q 005830 567 AGVFPEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGI 608 (675)
Q Consensus 567 ~r~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgi 608 (675)
.+-+|+-=..+++.+......++||||.. .|..+-++|++--
T Consensus 201 gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~s 243 (279)
T TIGR01452 201 GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTT 243 (279)
T ss_pred CCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcE
Confidence 34555544555566655567899999994 9999999999843
No 217
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=45.65 E-value=26 Score=30.39 Aligned_cols=78 Identities=21% Similarity=0.188 Sum_probs=44.8
Q ss_pred HHHHHHHHcCCeEEEEEeeccC--Cc-CCCC---C--CCCcEEEEEecccCCCCcchHHHHHHHHhCCCe-EEEEcCCCH
Q 005830 450 AVIDKFAERGLRSLGVARQEIP--EK-TKES---P--GAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN-VKMITGDQL 520 (675)
Q Consensus 450 ~~~~~~~~~G~r~l~~a~~~~~--~~-~~~~---~--e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~-v~~~TGd~~ 520 (675)
..++.+.+.|+++..+.-+.-+ .. -+.. . .-|+-.+. -..+.+.+.++++.+.|++ +|+.+|...
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~------~~~~~~~~~v~~~~~~g~~~v~~~~g~~~ 91 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVC------VPPDKVPEIVDEAAALGVKAVWLQPGAES 91 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-------S-HHHHHHHHHHHHHHT-SEEEE-TTS--
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEE------cCHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence 3455666689888877544311 00 0111 1 11221111 2346788999999999996 899999999
Q ss_pred HHHHHHHHHhCCC
Q 005830 521 AIGKETGRRLGMG 533 (675)
Q Consensus 521 ~~a~~ia~~~gi~ 533 (675)
..+...|++.|+.
T Consensus 92 ~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 92 EELIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHHHTT-E
T ss_pred HHHHHHHHHcCCE
Confidence 9999999999873
No 218
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=45.51 E-value=12 Score=30.31 Aligned_cols=22 Identities=23% Similarity=0.493 Sum_probs=16.4
Q ss_pred EEcCCccCCcEEEe-cCCCeeee
Q 005830 148 QDASILVPGDVISI-KLGDIVPA 169 (675)
Q Consensus 148 i~~~~L~~GDiv~l-~~G~~iPa 169 (675)
+.-.+|.+||.|.+ ++||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 34567999999988 68999996
No 219
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=44.66 E-value=56 Score=25.37 Aligned_cols=32 Identities=19% Similarity=0.095 Sum_probs=24.1
Q ss_pred CCeEEEEECCeEEEEE---cCCccCCcEEEecCCC
Q 005830 134 APKTKVLRDGRWSEQD---ASILVPGDVISIKLGD 165 (675)
Q Consensus 134 ~~~~~V~r~g~~~~i~---~~~L~~GDiv~l~~G~ 165 (675)
...++|-.+|..++|+ ..++.|||.|.+..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 4567788889988886 4568899999999984
No 220
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=44.64 E-value=1.9e+02 Score=27.04 Aligned_cols=107 Identities=17% Similarity=0.121 Sum_probs=67.2
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHH-HHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHH
Q 005830 497 DSAETIRRALNLGVNVKMITGDQLA-IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (675)
Q Consensus 497 ~~~~~i~~l~~~gi~v~~~TGd~~~-~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 575 (675)
|.-+++..+++.+-++.+++=.+.. ....+..-+|+. ...+.=.++++=.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 115 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-----------------------------IKIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-----------------------------EEEEEESSHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-----------------------------eEEEEECCHHHHH
Confidence 5566666666666677777655443 255566666652 2245556788888
Q ss_pred HHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHHHHHH
Q 005830 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKN 649 (675)
Q Consensus 576 ~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~~i~~ 649 (675)
..++.++..|.. +.+|++.- +..-+.. --..++...+..++..++.+++++.+..++
T Consensus 116 ~~i~~~~~~G~~-viVGg~~~-~~~A~~~---------------gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEGVD-VIVGGGVV-CRLARKL---------------GLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHHH-HHHHHHT---------------TSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCc-EEECCHHH-HHHHHHc---------------CCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 999999999854 46777632 2222222 223566777899999999999999887764
No 221
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=43.81 E-value=39 Score=31.09 Aligned_cols=42 Identities=14% Similarity=0.099 Sum_probs=37.5
Q ss_pred cCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 491 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 491 ~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
.=.+||++.+.++.|++. +++++.|.-....|..+.+.++..
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 345799999999999955 999999999999999999999865
No 222
>PF11694 DUF3290: Protein of unknown function (DUF3290); InterPro: IPR021707 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=42.01 E-value=1.2e+02 Score=27.81 Aligned_cols=21 Identities=14% Similarity=0.096 Sum_probs=15.8
Q ss_pred eEEEEEcCCccCCcEEEecCC
Q 005830 144 RWSEQDASILVPGDVISIKLG 164 (675)
Q Consensus 144 ~~~~i~~~~L~~GDiv~l~~G 164 (675)
+...|++..+.-|-||++...
T Consensus 97 ~~v~VNst~l~dG~iVki~~~ 117 (149)
T PF11694_consen 97 EEVYVNSTALTDGMIVKIGDK 117 (149)
T ss_pred heEEEecccccCCeEEEECCc
Confidence 356688888888888888743
No 223
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=41.88 E-value=2.4e+02 Score=24.73 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=24.2
Q ss_pred HHHHHHHHhCCCEEEEECCCcc--CHHHHHhCCccEEcC
Q 005830 575 YEIVKRLQERKHICGMTGDGVN--DAPALKKADIGIAVA 611 (675)
Q Consensus 575 ~~iv~~l~~~~~~v~~iGDg~N--D~~al~~A~vgia~~ 611 (675)
..+++.+.+ =+.+...|-|.| |..+++.-+|-++-.
T Consensus 52 ~~~l~~~~~-Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAAPN-LKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHHTT--SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhccce-eEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 445566633 346888899988 788888888877764
No 224
>PLN02645 phosphoglycolate phosphatase
Probab=41.71 E-value=60 Score=33.72 Aligned_cols=68 Identities=12% Similarity=0.015 Sum_probs=42.3
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCcc-EEc--CCcc--HHHH----hccCEEecCCChhHHHHHH
Q 005830 568 GVFPEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIG-IAV--ADAT--DAAR----SASDIVLTEPGLSVIISAV 637 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vg-ia~--~~~~--~~a~----~~ad~vl~~~~~~~i~~~i 637 (675)
+-.|.-=..+.+.+.-....++||||.. +|..+-+.|++- |.+ |.++ +... ..+|+++ +++..+.+++
T Consensus 230 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~--~~~~~l~~~~ 307 (311)
T PLN02645 230 KPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYT--SKISDFLTLK 307 (311)
T ss_pred CChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEE--CCHHHHHHHh
Confidence 3344433445555554567899999997 999999999973 333 3222 2111 2478888 5677766544
No 225
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.67 E-value=1.2e+02 Score=30.92 Aligned_cols=45 Identities=11% Similarity=0.118 Sum_probs=31.6
Q ss_pred ccCCCCcchHHHHHHHHhC-CCeE---EEEcCCCHHHH------HHHHHHhCCCC
Q 005830 490 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIG------KETGRRLGMGT 534 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~-gi~v---~~~TGd~~~~a------~~ia~~~gi~~ 534 (675)
+..+++++.++.++.+++. |++. +++.||++... ...|+++||..
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 63 (286)
T PRK14184 9 TAATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVS 63 (286)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3456778888999999876 7653 55578887543 45677888854
No 226
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=41.34 E-value=43 Score=29.26 Aligned_cols=80 Identities=14% Similarity=0.108 Sum_probs=54.6
Q ss_pred HHHHHcCCeEEEEEeeccCCcCC--CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCC-eE-EEEcCCCHHHHHHHHH
Q 005830 453 DKFAERGLRSLGVARQEIPEKTK--ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NV-KMITGDQLAIGKETGR 528 (675)
Q Consensus 453 ~~~~~~G~r~l~~a~~~~~~~~~--~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi-~v-~~~TGd~~~~a~~ia~ 528 (675)
.-+...|++|+.++.. .|.++. ...+.+-.++++-.......+.+++.++.|++.|. ++ +++-|..+..-....+
T Consensus 21 ~~l~~~G~~vi~lG~~-vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~ 99 (122)
T cd02071 21 RALRDAGFEVIYTGLR-QTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLK 99 (122)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHH
Confidence 3467789999988765 232221 11133446788888888889999999999999977 43 5566655554456667
Q ss_pred HhCCC
Q 005830 529 RLGMG 533 (675)
Q Consensus 529 ~~gi~ 533 (675)
+.|+.
T Consensus 100 ~~G~d 104 (122)
T cd02071 100 EMGVA 104 (122)
T ss_pred HCCCC
Confidence 88875
No 227
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=41.33 E-value=22 Score=22.22 Aligned_cols=15 Identities=40% Similarity=0.598 Sum_probs=13.1
Q ss_pred CCCCCHHHHHHHHhh
Q 005830 35 REGLTSDEGAHRLHV 49 (675)
Q Consensus 35 ~~GL~~~e~~~r~~~ 49 (675)
.+|||.+|+.+|+..
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999874
No 228
>PF15584 Imm44: Immunity protein 44
Probab=41.16 E-value=12 Score=30.57 Aligned_cols=19 Identities=32% Similarity=0.442 Sum_probs=15.3
Q ss_pred CCcEEEecCCCeeeeeEEE
Q 005830 155 PGDVISIKLGDIVPADARL 173 (675)
Q Consensus 155 ~GDiv~l~~G~~iPaD~~v 173 (675)
+.+-..|+.|++|||||+=
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 4455678999999999974
No 229
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.03 E-value=4.3e+02 Score=27.32 Aligned_cols=71 Identities=18% Similarity=0.228 Sum_probs=42.3
Q ss_pred HHHHhhhcCEEEecCHHHHHHHHHHHHh--CCCEEEEECCC-ccCHH---HHHhCCccEEcC-C--c-cHHHHhccCEEe
Q 005830 556 VDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDG-VNDAP---ALKKADIGIAVA-D--A-TDAARSASDIVL 625 (675)
Q Consensus 556 ~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg-~ND~~---al~~A~vgia~~-~--~-~~~a~~~ad~vl 625 (675)
+..+......|.-+||..=.++++...- .|..|+++|-| .-=.| +|..++.-+.+- . . ...+-..||+++
T Consensus 128 ~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVI 207 (301)
T PRK14194 128 VGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVV 207 (301)
T ss_pred hhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEE
Confidence 3344444455777888777777776643 48899999997 33333 455566666553 1 1 122334678876
Q ss_pred c
Q 005830 626 T 626 (675)
Q Consensus 626 ~ 626 (675)
.
T Consensus 208 s 208 (301)
T PRK14194 208 A 208 (301)
T ss_pred E
Confidence 4
No 230
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=39.60 E-value=16 Score=34.51 Aligned_cols=14 Identities=36% Similarity=0.245 Sum_probs=12.8
Q ss_pred EEecCCCccccCce
Q 005830 331 LCSDKTGTLTLNKL 344 (675)
Q Consensus 331 i~~DKTGTLT~~~~ 344 (675)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999984
No 231
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=38.67 E-value=38 Score=33.45 Aligned_cols=62 Identities=24% Similarity=0.290 Sum_probs=30.4
Q ss_pred EecCHHHHHHHHHHHHhCC-------CEEEEECCCccCHHHHHhC------CccEEcCCcc-HHHHhccCEEecCC
Q 005830 567 AGVFPEHKYEIVKRLQERK-------HICGMTGDGVNDAPALKKA------DIGIAVADAT-DAARSASDIVLTEP 628 (675)
Q Consensus 567 ~r~~p~~K~~iv~~l~~~~-------~~v~~iGDg~ND~~al~~A------~vgia~~~~~-~~a~~~ad~vl~~~ 628 (675)
.|..-..|...++.+-+.. ..++++||...|-.|++.. +++|.++..+ ..-..+|++-+.++
T Consensus 159 vrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~p 234 (235)
T PF02358_consen 159 VRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDDP 234 (235)
T ss_dssp EE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeecccccccccccccccC
Confidence 3444445999998876652 3699999999999999873 4566666433 22335677766543
No 232
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=38.50 E-value=36 Score=28.54 Aligned_cols=35 Identities=20% Similarity=0.457 Sum_probs=26.7
Q ss_pred EEEECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEE
Q 005830 138 KVLRDGRWSEQDASILVPGDVISIKLGDIVPADARLL 174 (675)
Q Consensus 138 ~V~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl 174 (675)
+|.-||+.. -|+.++.+||+|.|.-|... -...|+
T Consensus 35 rV~vNG~~a-KpS~~VK~GD~l~i~~~~~~-~~v~Vl 69 (100)
T COG1188 35 RVKVNGQRA-KPSKEVKVGDILTIRFGNKE-FTVKVL 69 (100)
T ss_pred eEEECCEEc-ccccccCCCCEEEEEeCCcE-EEEEEE
Confidence 566688766 79999999999999988754 234444
No 233
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=38.36 E-value=1.6e+02 Score=29.88 Aligned_cols=46 Identities=17% Similarity=0.018 Sum_probs=34.4
Q ss_pred EEecccCCCCcchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHhC
Q 005830 486 GLLPLFDPPRHDSAETIRRALNL-GVNVKMITGDQLAIGKETGRRLG 531 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~-gi~v~~~TGd~~~~a~~ia~~~g 531 (675)
.---....+-++..+.++.|... ...++++||.+.........-.|
T Consensus 33 ~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~ 79 (266)
T COG1877 33 VPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPG 79 (266)
T ss_pred ccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCC
Confidence 33344566778999999999877 55799999999987777665333
No 234
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=38.24 E-value=66 Score=33.05 Aligned_cols=37 Identities=27% Similarity=0.300 Sum_probs=26.9
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHH-HHHHHHhCC
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIG-KETGRRLGM 532 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a-~~ia~~~gi 532 (675)
+|+...-+.|+..|.+++++|......+ .+..+.++.
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 5677777889999999999997765444 344455555
No 235
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=36.64 E-value=4.7e+02 Score=29.55 Aligned_cols=70 Identities=14% Similarity=0.174 Sum_probs=52.2
Q ss_pred chHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHH
Q 005830 497 DSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (675)
Q Consensus 497 ~~~~~i~~l~~~gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 575 (675)
|+-+++..+++.+-++.+++=.+ ...+..++.-+++. ...+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-----------------------------i~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-----------------------------IEQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 67778888888777888887555 34556666666663 2357778899999
Q ss_pred HHHHHHHhCCCEEEEECCCcc
Q 005830 576 EIVKRLQERKHICGMTGDGVN 596 (675)
Q Consensus 576 ~iv~~l~~~~~~v~~iGDg~N 596 (675)
..|+.+++.|..+ .+||+.-
T Consensus 146 ~~v~~lk~~G~~~-vvG~~~~ 165 (538)
T PRK15424 146 GQINELKANGIEA-VVGAGLI 165 (538)
T ss_pred HHHHHHHHCCCCE-EEcCchH
Confidence 9999999999655 6788865
No 236
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=35.71 E-value=85 Score=28.09 Aligned_cols=80 Identities=11% Similarity=0.157 Sum_probs=52.3
Q ss_pred HHHHcCCeEEEEEeeccCCcC-CCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCC--eEEEEcCCCH---H---HHH
Q 005830 454 KFAERGLRSLGVARQEIPEKT-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV--NVKMITGDQL---A---IGK 524 (675)
Q Consensus 454 ~~~~~G~r~l~~a~~~~~~~~-~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi--~v~~~TGd~~---~---~a~ 524 (675)
-+...|+.|+.++...-+++- ....+.+-.++|+-++--.--+..++.++.|+++|. .++++-|-.. . .-.
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 456789999988876543321 111233456788888777777889999999999987 3566666321 1 123
Q ss_pred HHHHHhCCC
Q 005830 525 ETGRRLGMG 533 (675)
Q Consensus 525 ~ia~~~gi~ 533 (675)
.-++++|+.
T Consensus 104 ~~l~~~Gv~ 112 (134)
T TIGR01501 104 KRFKEMGFD 112 (134)
T ss_pred HHHHHcCCC
Confidence 457888864
No 237
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=35.62 E-value=1.6e+02 Score=29.11 Aligned_cols=83 Identities=13% Similarity=0.052 Sum_probs=51.7
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHH----HHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEe-
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAI----GKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAG- 568 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r- 568 (675)
+=||+.+.++...+.|.+|.-+|.+.... +..--++.|+.....+ .-++-+
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~------------------------~~llkk~ 178 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLES------------------------HLLLKKD 178 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccccc------------------------ceEEeeC
Confidence 34899999999999999999999887554 3444455666432110 111111
Q ss_pred -cCHHHHHHHHHHHHhCCCEEEEECCCccCHHHHHh
Q 005830 569 -VFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKK 603 (675)
Q Consensus 569 -~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~ 603 (675)
.+-+.....| ++.-.+|+.+||..+|-.....
T Consensus 179 ~k~Ke~R~~~v---~k~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 179 KKSKEVRRQAV---EKDYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred CCcHHHHHHHH---hhccceeeEecCchhhhcchhh
Confidence 1223333333 3345689999999999765543
No 238
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=34.85 E-value=7.4e+02 Score=28.90 Aligned_cols=85 Identities=12% Similarity=0.196 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcc-hHHHHHHHHhCCCeEEEEcCCCH
Q 005830 442 EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHD-SAETIRRALNLGVNVKMITGDQL 520 (675)
Q Consensus 442 ~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~-~~~~i~~l~~~gi~v~~~TGd~~ 520 (675)
+..++...+.++++.+.|.++.-+.-++-..... +. .-+|+-.+.-+..|+ =.+.|+++|+.|. ++++|||..
T Consensus 444 D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~a--IA---~elGId~v~A~~~PedK~~iV~~lQ~~G~-~VaMtGDGv 517 (679)
T PRK01122 444 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAA--IA---AEAGVDDFLAEATPEDKLALIRQEQAEGR-LVAMTGDGT 517 (679)
T ss_pred ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHH--HH---HHcCCcEEEccCCHHHHHHHHHHHHHcCC-eEEEECCCc
Confidence 3456778889999999999988776544211110 00 012222233344554 4455799998884 677789998
Q ss_pred HHHHHHHHH-hCC
Q 005830 521 AIGKETGRR-LGM 532 (675)
Q Consensus 521 ~~a~~ia~~-~gi 532 (675)
.-|-++++. +|+
T Consensus 518 NDAPALa~ADVGI 530 (679)
T PRK01122 518 NDAPALAQADVGV 530 (679)
T ss_pred chHHHHHhCCEeE
Confidence 888887763 454
No 239
>PLN02591 tryptophan synthase
Probab=34.72 E-value=2e+02 Score=28.86 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEECCCcc---CHHHHHh
Q 005830 571 PEHKYEIVKRLQERKHICGMTGDGVN---DAPALKK 603 (675)
Q Consensus 571 p~~K~~iv~~l~~~~~~v~~iGDg~N---D~~al~~ 603 (675)
|.+-...++.+++....-+++|-|.+ |+..+..
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~ 209 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAG 209 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHh
Confidence 55566778888877666777899988 4444443
No 240
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=34.69 E-value=3.5e+02 Score=27.84 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=26.3
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
.|+..++.+. +..+|+=+....+....|+..+++
T Consensus 90 ~DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 90 KDTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred HHHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc
Confidence 3555566554 556899999999999999999875
No 241
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.39 E-value=92 Score=31.77 Aligned_cols=45 Identities=16% Similarity=0.251 Sum_probs=33.1
Q ss_pred ccCCCCcchHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHhCCCC
Q 005830 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~---v~~~TGd~~~~a------~~ia~~~gi~~ 534 (675)
+.++++++.++-++.+++.|++ ..+..||++... ...|+++||..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456788899999999988876 456678887544 45677889854
No 242
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=34.16 E-value=48 Score=32.83 Aligned_cols=47 Identities=28% Similarity=0.245 Sum_probs=33.6
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEc---CCCHHHHHH-HHHHhCC
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMIT---GDQLAIGKE-TGRRLGM 532 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~T---Gd~~~~a~~-ia~~~gi 532 (675)
|++.-.+.+=+++.++|+.++++|++++++| |.+...... +.+..|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 5555556667799999999999999999999 444444333 3333565
No 243
>COG0272 Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair]
Probab=33.99 E-value=69 Score=36.48 Aligned_cols=70 Identities=24% Similarity=0.295 Sum_probs=44.0
Q ss_pred EEcCCccCCcEEEe-cCCCeeee-eEEEEecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEecchhhh
Q 005830 148 QDASILVPGDVISI-KLGDIVPA-DARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIATGVHTFF 225 (675)
Q Consensus 148 i~~~~L~~GDiv~l-~~G~~iPa-D~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~tG~~T~~ 225 (675)
|.-.||++||-|.| ++||.||- ++++.+. =+|+..|.. .|-..-.+||.+......+..-.++....-
T Consensus 363 I~rkdIrIGDtV~V~kAGdVIP~V~~Vv~e~---------R~~~~~~~~-~P~~CP~C~s~l~r~~~e~~~rC~n~~~C~ 432 (667)
T COG0272 363 IKRKDIRIGDTVVVRKAGDVIPQVVGVVLEK---------RPGNEKPIP-FPTHCPVCGSELVREEGEVVIRCTNGLNCP 432 (667)
T ss_pred HHhcCCCCCCEEEEEecCCCCcceeeeeccc---------CCCCCCCCC-CCCCCCCCCCeeEeccCceeEecCCCCCCh
Confidence 34578999999999 68999995 3333332 245555544 455555788888875555555555534333
Q ss_pred hh
Q 005830 226 GK 227 (675)
Q Consensus 226 g~ 227 (675)
++
T Consensus 433 aq 434 (667)
T COG0272 433 AQ 434 (667)
T ss_pred HH
Confidence 43
No 244
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.50 E-value=1e+02 Score=31.40 Aligned_cols=137 Identities=11% Similarity=0.134 Sum_probs=73.9
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHhCCCCCCCCCCC-------------------
Q 005830 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGTNMYPSSS------------------- 541 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v---~~~TGd~~~~a------~~ia~~~gi~~~~~~~~~------------------- 541 (675)
+..+++++.++.++.+++.|++. .++-||++... ...|+++||.........
T Consensus 9 va~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 88 (282)
T PRK14169 9 VSKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPD 88 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 34567888999999998888763 55668886544 456778888542211000
Q ss_pred ccC----Cccc------------------cccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHh--CCCEEEEECCCcc-
Q 005830 542 LLG----QDKD------------------ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN- 596 (675)
Q Consensus 542 ~~~----~~~~------------------~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N- 596 (675)
+.| .... +.++...+..+..+...|.-+||..=.++++...- .|..|+.+|-+..
T Consensus 89 V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 168 (282)
T PRK14169 89 VDAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIV 168 (282)
T ss_pred CCEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 000 0000 01111122223333334667788777777766643 4788999998743
Q ss_pred ---CHHHHHhCCccEEc--CCccH--HHHhccCEEec
Q 005830 597 ---DAPALKKADIGIAV--ADATD--AARSASDIVLT 626 (675)
Q Consensus 597 ---D~~al~~A~vgia~--~~~~~--~a~~~ad~vl~ 626 (675)
=+.+|...+.-+.+ ....+ ..-..||+++.
T Consensus 169 GkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~ 205 (282)
T PRK14169 169 GRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVV 205 (282)
T ss_pred hHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 22345444444444 32222 22347888764
No 245
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.18 E-value=97 Score=31.68 Aligned_cols=138 Identities=14% Similarity=0.198 Sum_probs=75.3
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHhCCCCCCCCCCC-------------------
Q 005830 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGTNMYPSSS------------------- 541 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v---~~~TGd~~~~a------~~ia~~~gi~~~~~~~~~------------------- 541 (675)
+.+.++++.++.++.+++.|++. +++-||++... ...|+++||.........
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDS 90 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 45667888999999998888764 55568887544 446778888542211000
Q ss_pred ccCC----ccc------------------cccCcccHHHHhhhcCEEEecCHHHHHHHHHHHH--hCCCEEEEECCCc--
Q 005830 542 LLGQ----DKD------------------ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQ--ERKHICGMTGDGV-- 595 (675)
Q Consensus 542 ~~~~----~~~------------------~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~--~~~~~v~~iGDg~-- 595 (675)
+.|- ... +.++...+..+..+...|.-+||..=.++++... -.|..|+.+|-|.
T Consensus 91 V~GIivq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~V 170 (286)
T PRK14175 91 VSGILVQVPLPKQVSEQKILEAINPEKDVDGFHPINIGKLYIDEQTFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIV 170 (286)
T ss_pred CCEEEEeCCCCCCCCHHHHHhccCcccCcccCCccchHhHhcCCCCCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchh
Confidence 0000 000 0111122223333334466778877777776654 2488999999985
Q ss_pred --cCHHHHHh--CCccEEcCCccH--HHHhccCEEecC
Q 005830 596 --NDAPALKK--ADIGIAVADATD--AARSASDIVLTE 627 (675)
Q Consensus 596 --ND~~al~~--A~vgia~~~~~~--~a~~~ad~vl~~ 627 (675)
-=+.+|.. |.|-+.-....+ ..-..||+++..
T Consensus 171 G~pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVIsA 208 (286)
T PRK14175 171 GQPVSKLLLQKNASVTILHSRSKDMASYLKDADVIVSA 208 (286)
T ss_pred HHHHHHHHHHCCCeEEEEeCCchhHHHHHhhCCEEEEC
Confidence 12334444 344433332222 233478888753
No 246
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.47 E-value=1.1e+02 Score=31.58 Aligned_cols=137 Identities=15% Similarity=0.152 Sum_probs=74.7
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHhCCCCCCCCCCC-------------------
Q 005830 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGTNMYPSSS------------------- 541 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v---~~~TGd~~~~a------~~ia~~~gi~~~~~~~~~------------------- 541 (675)
+.+.+|++.++-++.+++.|++. +++-||++... ...|+++||.........
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADED 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 44567888999999999888853 55668886543 456778888542211000
Q ss_pred c----cCCccc------------------cccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHh--CCCEEEEECCCcc-
Q 005830 542 L----LGQDKD------------------ASIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN- 596 (675)
Q Consensus 542 ~----~~~~~~------------------~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N- 596 (675)
+ ...... +.++...+..+......|.-+||..=.++++..+- .|..|+.+|-+..
T Consensus 90 V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 169 (297)
T PRK14167 90 VHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIV 169 (297)
T ss_pred CCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 0 000000 01111122223223334667888777777776643 4888999998843
Q ss_pred ---CHHHHHh------CCccEEcCCccH--HHHhccCEEec
Q 005830 597 ---DAPALKK------ADIGIAVADATD--AARSASDIVLT 626 (675)
Q Consensus 597 ---D~~al~~------A~vgia~~~~~~--~a~~~ad~vl~ 626 (675)
=+.+|.. |-|-++-....+ ..-..||+++.
T Consensus 170 GkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 170 GKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVA 210 (297)
T ss_pred HHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 1224433 334444432222 23357888875
No 247
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=32.05 E-value=60 Score=28.02 Aligned_cols=80 Identities=13% Similarity=0.243 Sum_probs=54.4
Q ss_pred HHHHHcCCeEEEEEeeccCCcCC--CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCC-eE-EEEcCCCHHHHHHHHH
Q 005830 453 DKFAERGLRSLGVARQEIPEKTK--ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NV-KMITGDQLAIGKETGR 528 (675)
Q Consensus 453 ~~~~~~G~r~l~~a~~~~~~~~~--~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi-~v-~~~TGd~~~~a~~ia~ 528 (675)
..+...|++|+.+... .|.++. .-.+.+..++|+-....+--+.+++.++.+|+.+- ++ +++-|-....-...++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 3456789999877633 443321 11234456888888877777999999999999976 44 6666765544346778
Q ss_pred HhCCC
Q 005830 529 RLGMG 533 (675)
Q Consensus 529 ~~gi~ 533 (675)
+.|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 88864
No 248
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=31.76 E-value=1e+02 Score=24.75 Aligned_cols=47 Identities=13% Similarity=0.270 Sum_probs=37.2
Q ss_pred EecccCCCCcchHHHHHHHHhCCCeEEE-EcCCCHHHHHHHHHHhCCC
Q 005830 487 LLPLFDPPRHDSAETIRRALNLGVNVKM-ITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 487 ~i~~~d~lr~~~~~~i~~l~~~gi~v~~-~TGd~~~~a~~ia~~~gi~ 533 (675)
++.+.+..++.+.+..+.||+.|+++.+ ..+.+...-..-|...|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445567788888999999999999988 5677777777788888874
No 249
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=31.41 E-value=6.3e+02 Score=28.46 Aligned_cols=102 Identities=14% Similarity=0.111 Sum_probs=66.5
Q ss_pred chHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHH
Q 005830 497 DSAETIRRALNLGVNVKMITGDQ-LAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (675)
Q Consensus 497 ~~~~~i~~l~~~gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 575 (675)
|+-.++..+++.+-++.+++=.+ ...+..++.-+++. ..++.-.++++=.
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 135 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD-----------------------------IVQRSYVTEEDAR 135 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 67778888888777888887544 35566677766663 2357778899999
Q ss_pred HHHHHHHhCCCEEEEECCCccCHHHHHhCCccEEcCCccHHHHhccCEEecCCChhHHHHHHHHHHHHHH
Q 005830 576 EIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQ 645 (675)
Q Consensus 576 ~iv~~l~~~~~~v~~iGDg~ND~~al~~A~vgia~~~~~~~a~~~ad~vl~~~~~~~i~~~i~~gr~~~~ 645 (675)
..++.++++|..+ ++||+.- +.+-+++++- .++..+ ..++..++..+....+
T Consensus 136 ~~~~~l~~~G~~~-viG~~~~-~~~A~~~gl~---------------~ili~s-~esi~~a~~~A~~~~~ 187 (526)
T TIGR02329 136 SCVNDLRARGIGA-VVGAGLI-TDLAEQAGLH---------------GVFLYS-ADSVRQAFDDALDVAR 187 (526)
T ss_pred HHHHHHHHCCCCE-EECChHH-HHHHHHcCCc---------------eEEEec-HHHHHHHHHHHHHHHH
Confidence 9999999999655 6788854 2333444441 222222 2666666666665544
No 250
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=29.70 E-value=3.6e+02 Score=23.15 Aligned_cols=28 Identities=14% Similarity=0.184 Sum_probs=23.8
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLA 521 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~ 521 (675)
--+++.++++.+|+.|++++.+|+.+..
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s 86 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNS 86 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3468899999999999999999987643
No 251
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=29.31 E-value=42 Score=33.09 Aligned_cols=35 Identities=20% Similarity=0.224 Sum_probs=30.4
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCC
Q 005830 498 SAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 498 ~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 533 (675)
..++++ ++++|++++++||++...+..+.+.+++.
T Consensus 20 ~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 20 FVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred HHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 345665 68999999999999999999999999875
No 252
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=29.26 E-value=93 Score=26.91 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=28.2
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCC
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGM 532 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi 532 (675)
--+++.++++.+++.|++++.+|++.. -...+.+.|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 346889999999999999999998874 3334554454
No 253
>PF02699 YajC: Preprotein translocase subunit; InterPro: IPR003849 Secretion across the inner membrane in some Gram-negative bacteria occurs via the preprotein translocase pathway. Proteins are produced in the cytoplasm as precursors, and require a chaperone subunit to direct them to the translocase component []. From there, the mature proteins are either targeted to the outer membrane, or remain as periplasmic proteins []. The translocase protein subunits are encoded on the bacterial chromosome. The translocase itself comprises 7 proteins, including a chaperone (SecB), ATPase (SecA), an integral membrane complex (SecY, SecE and SecG), and two additional membrane proteins that promote the release of the mature peptide into the periplasm (SecD and SecF) []. Other cytoplasmic/periplasmic proteins play a part in preprotein translocase activity, namely YidC and YajC []. The latter is bound in a complex to SecD and SecF, and plays a part in stabilising and regulating secretion through the SecYEG integral membrane component via SecA []. Homologues of the YajC gene have been found in a range of pathogenic and commensal microbes. Brucella abortis YajC- and SecD-like proteins were shown to stimulate a Th1 cell-mediated immune response in mice, and conferred protection when challenged with B.abortis []. Therefore, these proteins may have an antigenic role as well as a secretory one in virulent bacteria []. A number of previously uncharacterised "hypothetical" proteins also show similarity to E.coli YajC, suggesting that this family is wider than first thought []. More recently, the precise interactions between the E.coli SecYEG complex, SecD, SecF, YajC and YidC have been studied []. Rather than acting individually, the four proteins form a heterotetrameric complex and associate with the SecYEG heterotrimeric complex []. The SecF and YajC subunits link the complex to the integral membrane translocase. ; PDB: 2RDD_B.
Probab=28.70 E-value=72 Score=25.79 Aligned_cols=13 Identities=38% Similarity=0.491 Sum_probs=0.0
Q ss_pred CccCCcEEEecCC
Q 005830 152 ILVPGDVISIKLG 164 (675)
Q Consensus 152 ~L~~GDiv~l~~G 164 (675)
+|+|||-|....|
T Consensus 36 ~Lk~Gd~VvT~gG 48 (82)
T PF02699_consen 36 SLKPGDEVVTIGG 48 (82)
T ss_dssp -------------
T ss_pred cCCCCCEEEECCc
Confidence 4445554444433
No 254
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.63 E-value=2.8e+02 Score=28.24 Aligned_cols=64 Identities=20% Similarity=0.297 Sum_probs=38.0
Q ss_pred CEEEecCHHHHHHHHHHHHh--CCCEEEEECCC-ccCHH---HHHhCC--ccEEcCCccH--HHHhccCEEecC
Q 005830 564 DGFAGVFPEHKYEIVKRLQE--RKHICGMTGDG-VNDAP---ALKKAD--IGIAVADATD--AARSASDIVLTE 627 (675)
Q Consensus 564 ~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg-~ND~~---al~~A~--vgia~~~~~~--~a~~~ad~vl~~ 627 (675)
..|.-+||..=.++++...- .|..|..+|-+ .-=-| +|...+ |-++-....+ ..-..||+++..
T Consensus 129 ~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 129 PGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 44667788777777766543 48899999998 33333 554444 4444433222 223478888753
No 255
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=28.61 E-value=2.3e+02 Score=28.43 Aligned_cols=106 Identities=18% Similarity=0.156 Sum_probs=58.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH---HhCCCCCCCC--CCCccCCccccccCcccHHHHhhhcCEEEe
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGMGTNMYP--SSSLLGQDKDASIAALPVDELIEKADGFAG 568 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~---~~gi~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 568 (675)
+-+++++.|+.+++.|+.|.-+|...+.......+ ++||.-.... ........ ...+...-.-...+...|+.
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~--~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFP--VFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecc--cccCCCCCCceeecCeEEeC
Confidence 45799999999999999999999988755544444 4677532211 10000000 00000000011112223333
Q ss_pred cCHHHHHHHHHHH----HhCCCEEEEECCCccCHHHHHh
Q 005830 569 VFPEHKYEIVKRL----QERKHICGMTGDGVNDAPALKK 603 (675)
Q Consensus 569 ~~p~~K~~iv~~l----~~~~~~v~~iGDg~ND~~al~~ 603 (675)
- .+|......+ ......+.|+-|....+..+..
T Consensus 160 ~--~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~ 196 (252)
T PF11019_consen 160 G--QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEK 196 (252)
T ss_pred C--CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHH
Confidence 3 4454444333 3346689999999888876654
No 256
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.43 E-value=1.2e+02 Score=30.93 Aligned_cols=45 Identities=18% Similarity=0.308 Sum_probs=31.8
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCCHHH------HHHHHHHhCCCC
Q 005830 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------GKETGRRLGMGT 534 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v---~~~TGd~~~~------a~~ia~~~gi~~ 534 (675)
+.+.++++.++-++.+++.|++. +++-||++.. ....|+++||..
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 64 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYS 64 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 45567888899999998878753 4456887643 355677888853
No 257
>PRK10444 UMP phosphatase; Provisional
Probab=28.40 E-value=1.6e+02 Score=29.35 Aligned_cols=65 Identities=18% Similarity=0.173 Sum_probs=40.2
Q ss_pred EecCHHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCccE-EcCCc--c-HHHH---hccCEEecCCChhHH
Q 005830 567 AGVFPEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGI-AVADA--T-DAAR---SASDIVLTEPGLSVI 633 (675)
Q Consensus 567 ~r~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgi-a~~~~--~-~~a~---~~ad~vl~~~~~~~i 633 (675)
.+-+|+-=..+.+.+......++||||.. +|..+-+.|++-- .+..| + +... ...|+++ +++..+
T Consensus 173 gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~--~sl~el 245 (248)
T PRK10444 173 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIY--PSVADI 245 (248)
T ss_pred CCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEE--CCHHHh
Confidence 34445544555555554567899999997 8999999999844 33322 2 2222 3467777 444443
No 258
>PRK10671 copA copper exporting ATPase; Provisional
Probab=28.40 E-value=8.3e+02 Score=29.32 Aligned_cols=34 Identities=29% Similarity=0.402 Sum_probs=16.5
Q ss_pred CcEEEecCCCeeeeeEEEEe-cCCeeEeeccccCC
Q 005830 156 GDVISIKLGDIVPADARLLE-GDPLKIDQSALTGE 189 (675)
Q Consensus 156 GDiv~l~~G~~iPaD~~vl~-g~~~~Vdes~LTGE 189 (675)
|....+...+..|-|.+++. |+.+-+|=-.+.|+
T Consensus 331 ~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~ 365 (834)
T PRK10671 331 EGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE 365 (834)
T ss_pred CcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce
Confidence 44455555555666666653 22333444444443
No 259
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=27.40 E-value=2.1e+02 Score=25.63 Aligned_cols=28 Identities=21% Similarity=0.248 Sum_probs=18.7
Q ss_pred HHHHHHHHhCCCEEEEECCCccCHHHHH
Q 005830 575 YEIVKRLQERKHICGMTGDGVNDAPALK 602 (675)
Q Consensus 575 ~~iv~~l~~~~~~v~~iGDg~ND~~al~ 602 (675)
...++.+++.|..|..+|-...-.+.|+
T Consensus 113 ~~~i~~lr~~G~~V~v~~~~~~~s~~L~ 140 (149)
T cd06167 113 VPLVERLRELGKRVIVVGFEAKTSRELR 140 (149)
T ss_pred HHHHHHHHHcCCEEEEEccCccChHHHH
Confidence 4567777778888888777744444443
No 260
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=26.72 E-value=1.6e+02 Score=26.29 Aligned_cols=16 Identities=13% Similarity=-0.010 Sum_probs=10.4
Q ss_pred hhcCCCccCcccccHH
Q 005830 48 HVFGPNKLEEKKESKV 63 (675)
Q Consensus 48 ~~~G~N~i~~~~~~~~ 63 (675)
+.||+.-.+.+.+++|
T Consensus 12 ~~y~ecls~~~~psff 27 (189)
T PF05568_consen 12 RHYGECLSPVTPPSFF 27 (189)
T ss_pred hhhhhhcCCCCCccHH
Confidence 4577777677667643
No 261
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=26.63 E-value=1.7e+02 Score=28.68 Aligned_cols=100 Identities=18% Similarity=0.122 Sum_probs=61.0
Q ss_pred CCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhC-CCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHH
Q 005830 494 PRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLG-MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPE 572 (675)
Q Consensus 494 lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~g-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 572 (675)
+-||+.+.++.|+..|+.+-++|+-+..+...--+..+ +-. ....... +...+. -.....|+
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~-~f~~~v~-~d~~~v---------------~~gKP~Pd 155 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK-NFSHVVL-GDDPEV---------------KNGKPDPD 155 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH-hcCCCee-cCCccc---------------cCCCCCch
Confidence 45699999999999999999999987655544444333 211 1111111 111110 01123454
Q ss_pred HHHHHHHHHHhCC-CEEEEECCCccCHHHHHhCCccEEc
Q 005830 573 HKYEIVKRLQERK-HICGMTGDGVNDAPALKKADIGIAV 610 (675)
Q Consensus 573 ~K~~iv~~l~~~~-~~v~~iGDg~ND~~al~~A~vgia~ 610 (675)
-=....+.+.... ..++++.|..+=+.|-++|+.=+-+
T Consensus 156 i~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~ 194 (222)
T KOG2914|consen 156 IYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVG 194 (222)
T ss_pred HHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEE
Confidence 4455556665555 7788888888888888888775544
No 262
>PRK04980 hypothetical protein; Provisional
Probab=26.63 E-value=80 Score=26.73 Aligned_cols=58 Identities=28% Similarity=0.393 Sum_probs=38.1
Q ss_pred CCeEEEEECCeEEEEEcCCccCCcEEEec--CCCeeeeeEEEEecCCeeEee-----ccccCCCcccccC
Q 005830 134 APKTKVLRDGRWSEQDASILVPGDVISIK--LGDIVPADARLLEGDPLKIDQ-----SALTGESLPVTKN 196 (675)
Q Consensus 134 ~~~~~V~r~g~~~~i~~~~L~~GDiv~l~--~G~~iPaD~~vl~g~~~~Vde-----s~LTGEs~pv~K~ 196 (675)
..+..-+|++. ....+|||++.|. .+.+.-|+..|++=....+|| +...|+|.+.-|.
T Consensus 18 GkKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk~ 82 (102)
T PRK04980 18 GRKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELKQ 82 (102)
T ss_pred CCceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHHH
Confidence 45556677753 3579999999997 788899999999753333322 2334665554443
No 263
>COG5547 Small integral membrane protein [Function unknown]
Probab=26.55 E-value=2.7e+02 Score=20.70 Aligned_cols=48 Identities=21% Similarity=0.407 Sum_probs=23.7
Q ss_pred HHHHHHhHHH--HHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHh
Q 005830 66 FLGFMWNPLS--WVMEAAAIMAIALANGGGRDPDWQDFVGIIVLLVINSTISFIEENN 121 (675)
Q Consensus 66 ~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 121 (675)
+++++.-|+. .+.++.|++.+.++ .|-+ +.++++..++..+..+.+++
T Consensus 3 flk~fkypIIgglvglliAili~t~G-------fwKt-ilviil~~lGv~iGl~~~r~ 52 (62)
T COG5547 3 FLKKFKYPIIGGLVGLLIAILILTFG-------FWKT-ILVIILILLGVYIGLYKKRT 52 (62)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHH-------HHHH-HHHHHHHHHHHHHHHHHHhh
Confidence 4556666654 23333344433332 3443 44455556666666665543
No 264
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=26.54 E-value=1e+02 Score=31.41 Aligned_cols=48 Identities=23% Similarity=0.344 Sum_probs=39.1
Q ss_pred EEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH---HhCCC
Q 005830 486 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGR---RLGMG 533 (675)
Q Consensus 486 G~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~---~~gi~ 533 (675)
|++-..+.+=|++.++++.|++.|-++..+|..+..+-...++ ++|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 7777788899999999999999999999999888666555544 45654
No 265
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=26.39 E-value=1.2e+03 Score=28.34 Aligned_cols=162 Identities=12% Similarity=0.065 Sum_probs=79.6
Q ss_pred CCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeecc--ccCCCc-cc----ccCCCCccccceeeeeceEEE
Q 005830 142 DGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSA--LTGESL-PV----TKNPYDEVFSGSTCKQGEIEA 214 (675)
Q Consensus 142 ~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~--LTGEs~-pv----~K~~~~~v~aGt~v~~g~~~~ 214 (675)
-|....+...|.+|-|.+.++.. .+=+|=-.|.|++.-|.-.. ..++.. +. .-..|..+.+|.-..-=...|
T Consensus 93 ~GDiv~l~~Gd~IPaD~~ll~~~-~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG 171 (917)
T TIGR01116 93 PGDIVELAVGDKVPADIRVLSLK-TLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTG 171 (917)
T ss_pred CCCEEEECCCCEeeccEEEEEec-ceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeC
Confidence 47889999999999999999764 34456666666543332221 111111 11 125688888886433322333
Q ss_pred EEEEecchhhhhhhhhhhh-ccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH--------HHh-ccccchHHHHHHHHH
Q 005830 215 VVIATGVHTFFGKAAHLVD-STNQVGHFQKVLTAIGNFCICSIAVGIVAEIII--------MYP-VQHRKYRDGIDNLLV 284 (675)
Q Consensus 215 ~V~~tG~~T~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~ 284 (675)
.=+..|.-... +..... .+.-...+.+....+..+.+++.++..++.... .|. .....+..++..++.
T Consensus 172 ~~T~~gki~~~--~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~v~ 249 (917)
T TIGR01116 172 MSTEIGKIRDE--MRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVA 249 (917)
T ss_pred CCCHHHHHHHH--hhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHhhhhh
Confidence 34444431111 111111 122122344444444443222211111111111 011 111233445556677
Q ss_pred HHHHhccCcchHHHHHHHHHHH
Q 005830 285 LLIGGIPIAMPTVLSVTMAIGS 306 (675)
Q Consensus 285 ll~~~iP~~l~~~~~~~~~~~~ 306 (675)
.+..++|..+++++..+.....
T Consensus 250 ~iP~~Lp~~vti~l~~~~~~m~ 271 (917)
T TIGR01116 250 AIPEGLPAVITTCLALGTRKMA 271 (917)
T ss_pred ccccccHHHHHHHHHHHHHHHH
Confidence 7888999999888888876544
No 266
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=26.22 E-value=92 Score=27.77 Aligned_cols=97 Identities=13% Similarity=0.064 Sum_probs=0.0
Q ss_pred HHHcCCeEEEEEeeccCCcC-CCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHHHhC
Q 005830 455 FAERGLRSLGVARQEIPEKT-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV--NVKMITGDQLAIGKETGRRLG 531 (675)
Q Consensus 455 ~~~~G~r~l~~a~~~~~~~~-~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi--~v~~~TGd~~~~a~~ia~~~g 531 (675)
|...|+.|+......-+++- ....+.+-..+|+-++...--+..++.++.|+++|. -.+++-|-.+..-....+++|
T Consensus 26 l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~G 105 (132)
T TIGR00640 26 YADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMG 105 (132)
T ss_pred HHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCC
Q ss_pred CCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHHHHHHH
Q 005830 532 MGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKYEIVKR 580 (675)
Q Consensus 532 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~ 580 (675)
+... +..+.++.+....+..
T Consensus 106 vd~~-----------------------------~~~gt~~~~i~~~l~~ 125 (132)
T TIGR00640 106 VAEI-----------------------------FGPGTPIPESAIFLLK 125 (132)
T ss_pred CCEE-----------------------------ECCCCCHHHHHHHHHH
No 267
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=25.98 E-value=96 Score=27.85 Aligned_cols=81 Identities=10% Similarity=0.192 Sum_probs=54.2
Q ss_pred HHHHHcCCeEEEEEeeccCCcC-CCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCC-e-EEEEcCCC------HHHH
Q 005830 453 DKFAERGLRSLGVARQEIPEKT-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-N-VKMITGDQ------LAIG 523 (675)
Q Consensus 453 ~~~~~~G~r~l~~a~~~~~~~~-~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi-~-v~~~TGd~------~~~a 523 (675)
.-+...|++|+.++...-+++- ....+.+-.++|+-...-.-.+.+++.++.|++.|. . .+++-|-- ....
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~ 104 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEV 104 (137)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHH
Confidence 3456789999999875422211 111234447889888888999999999999999966 3 34555543 3444
Q ss_pred HHHHHHhCCC
Q 005830 524 KETGRRLGMG 533 (675)
Q Consensus 524 ~~ia~~~gi~ 533 (675)
...++++|..
T Consensus 105 ~~~l~~~G~~ 114 (137)
T PRK02261 105 EKKFKEMGFD 114 (137)
T ss_pred HHHHHHcCCC
Confidence 5677788853
No 268
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.50 E-value=1.7e+02 Score=29.79 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=32.8
Q ss_pred ccCCCCcchHHHHHHHHhCCCe---EEEEcCCCHHHH------HHHHHHhCCCC
Q 005830 490 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAIG------KETGRRLGMGT 534 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~---v~~~TGd~~~~a------~~ia~~~gi~~ 534 (675)
+.++++++.++.++.+++.|++ .+++-||++... ...|+++||..
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 62 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITS 62 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788899999999988876 355668887544 45677889854
No 269
>COG2501 S4-like RNA binding protein [Replication, recombination, and repair]
Probab=25.27 E-value=83 Score=24.79 Aligned_cols=26 Identities=27% Similarity=0.325 Sum_probs=23.2
Q ss_pred EEEECCeEEEEEcCCccCCcEEEecC
Q 005830 138 KVLRDGRWSEQDASILVPGDVISIKL 163 (675)
Q Consensus 138 ~V~r~g~~~~i~~~~L~~GDiv~l~~ 163 (675)
.|..||+.++-.-+.|+.||+|.+..
T Consensus 38 ~V~vNGe~EtRRgkKlr~gd~V~i~~ 63 (73)
T COG2501 38 EVKVNGEVETRRGKKLRDGDVVEIPG 63 (73)
T ss_pred eEEECCeeeeccCCEeecCCEEEECC
Confidence 68889999999999999999999843
No 270
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.03 E-value=1.7e+02 Score=29.87 Aligned_cols=138 Identities=11% Similarity=0.157 Sum_probs=75.6
Q ss_pred ccCCCCcchHHHHHHHHhCCCe----EEEEcCCCHHHH------HHHHHHhCCCCCCCCCC--C----------------
Q 005830 490 LFDPPRHDSAETIRRALNLGVN----VKMITGDQLAIG------KETGRRLGMGTNMYPSS--S---------------- 541 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~----v~~~TGd~~~~a------~~ia~~~gi~~~~~~~~--~---------------- 541 (675)
+.+++|++.++-++.+++.|.+ ..++-||++... ...|+++||........ .
T Consensus 10 iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d~ 89 (278)
T PRK14172 10 VALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKDN 89 (278)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 4456788888999999877742 355678887554 45677888853211100 0
Q ss_pred -ccC----Cccc---------------c---ccCcccHHHHhhhcCEEEecCHHHHHHHHHHHHh--CCCEEEEECCCcc
Q 005830 542 -LLG----QDKD---------------A---SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN 596 (675)
Q Consensus 542 -~~~----~~~~---------------~---~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N 596 (675)
+.| .... + .++...+..+......|.-+||..=.++++...- .|..|+++|-+..
T Consensus 90 ~V~GIlvqlPLP~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~ 169 (278)
T PRK14172 90 NVHGIMLQLPLPKHLDEKKITNKIDANKDIDCLTFISVGKFYKGEKCFLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNI 169 (278)
T ss_pred CCCeEEEcCCCCCCCCHHHHHhccCcccccCccCHhhHHHHhCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCcc
Confidence 000 0000 0 0111112222223334667888877777777643 4889999999843
Q ss_pred ----CHHHHHhCCccEEc--CCccHH--HHhccCEEecC
Q 005830 597 ----DAPALKKADIGIAV--ADATDA--ARSASDIVLTE 627 (675)
Q Consensus 597 ----D~~al~~A~vgia~--~~~~~~--a~~~ad~vl~~ 627 (675)
=+.+|...+.-+.+ ....+. .-..||+++..
T Consensus 170 VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 170 VGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 23355555555544 322222 22478988753
No 271
>PRK15108 biotin synthase; Provisional
Probab=24.97 E-value=8.3e+02 Score=25.72 Aligned_cols=86 Identities=8% Similarity=0.057 Sum_probs=49.7
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEecCHHHHH
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGVFPEHKY 575 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~ 575 (675)
+...+.++.+++.|+.+.+--|.-......--++.|+........ ......+ .++..-+.+++.
T Consensus 111 e~i~~~i~~ik~~~i~v~~s~G~ls~e~l~~LkeAGld~~n~~le--------------T~p~~f~--~I~~~~~~~~rl 174 (345)
T PRK15108 111 PYLEQMVQGVKAMGLETCMTLGTLSESQAQRLANAGLDYYNHNLD--------------TSPEFYG--NIITTRTYQERL 174 (345)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcCCHHHHHHHHHcCCCEEeeccc--------------cChHhcC--CCCCCCCHHHHH
Confidence 567788888888888876444654444444455667752110000 0011111 123445778899
Q ss_pred HHHHHHHhCCCEEE---EECCCccC
Q 005830 576 EIVKRLQERKHICG---MTGDGVND 597 (675)
Q Consensus 576 ~iv~~l~~~~~~v~---~iGDg~ND 597 (675)
+.++..++.|..+. ++|=|..+
T Consensus 175 ~~i~~a~~~G~~v~sg~i~GlgEt~ 199 (345)
T PRK15108 175 DTLEKVRDAGIKVCSGGIVGLGETV 199 (345)
T ss_pred HHHHHHHHcCCceeeEEEEeCCCCH
Confidence 99999988876544 56666443
No 272
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.96 E-value=1.8e+02 Score=29.62 Aligned_cols=137 Identities=16% Similarity=0.181 Sum_probs=74.3
Q ss_pred ccCCCCcchHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHhCCCCCCCCCCC-------------------
Q 005830 490 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIG------KETGRRLGMGTNMYPSSS------------------- 541 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v---~~~TGd~~~~a------~~ia~~~gi~~~~~~~~~------------------- 541 (675)
+...++++.++.++.+++.|++. ++.-||++.+. ...|+++||.........
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 88 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHDDS 88 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 34567788899999998888764 55668876443 456778898532111000
Q ss_pred ccCC----cc---------------cc---ccCcccHHHHhhh-cCEEEecCHHHHHHHHHHHHh--CCCEEEEECCCcc
Q 005830 542 LLGQ----DK---------------DA---SIAALPVDELIEK-ADGFAGVFPEHKYEIVKRLQE--RKHICGMTGDGVN 596 (675)
Q Consensus 542 ~~~~----~~---------------~~---~~~~~~~~~~~~~-~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N 596 (675)
+.|- .. ++ .++...+..+... ..-|.-+||..=.++++...- .|..|+.+|-+..
T Consensus 89 V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~i 168 (282)
T PRK14166 89 VHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNI 168 (282)
T ss_pred CCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCc
Confidence 0000 00 00 1111122223222 234667788777777776543 4888999998843
Q ss_pred ----CHHHHHhCCccEEc--CCccH--HHHhccCEEec
Q 005830 597 ----DAPALKKADIGIAV--ADATD--AARSASDIVLT 626 (675)
Q Consensus 597 ----D~~al~~A~vgia~--~~~~~--~a~~~ad~vl~ 626 (675)
=+.+|...+.-+.+ ....+ ..-..||+++.
T Consensus 169 VGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIs 206 (282)
T PRK14166 169 VGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIV 206 (282)
T ss_pred chHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 23355545555544 32122 22347888864
No 273
>PLN02423 phosphomannomutase
Probab=24.87 E-value=1e+02 Score=30.75 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=25.9
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHH
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIG 523 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a 523 (675)
++.+...++|++|++. ++++++||+.....
T Consensus 24 ~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~ 53 (245)
T PLN02423 24 EATPEMLEFMKELRKV-VTVGVVGGSDLSKI 53 (245)
T ss_pred cCCHHHHHHHHHHHhC-CEEEEECCcCHHHH
Confidence 5788999999999987 99999999976544
No 274
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=24.62 E-value=1.2e+02 Score=25.97 Aligned_cols=78 Identities=17% Similarity=0.154 Sum_probs=40.1
Q ss_pred hHHHHHHHHhCCCeEEEEc-CCC-----HH--HHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 498 SAETIRRALNLGVNVKMIT-GDQ-----LA--IGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 498 ~~~~i~~l~~~gi~v~~~T-Gd~-----~~--~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
.++-++++++.|++.++.= .|. +. .-...|++.||.-...|.. ....
T Consensus 16 ~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~-------------------------~~~~ 70 (110)
T PF04273_consen 16 SPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVD-------------------------GGAI 70 (110)
T ss_dssp -HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE-----------------------------TTT-
T ss_pred CHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecC-------------------------CCCC
Confidence 4567889999999977764 232 11 2346788999853222211 2234
Q ss_pred CHHHHHHHHHHHHhCC-CEEEEECCCccCHHHH
Q 005830 570 FPEHKYEIVKRLQERK-HICGMTGDGVNDAPAL 601 (675)
Q Consensus 570 ~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~al 601 (675)
++++=..+.+.+.+.. .+.++|.-| +.+.+|
T Consensus 71 ~~~~v~~f~~~l~~~~~Pvl~hC~sG-~Ra~~l 102 (110)
T PF04273_consen 71 TEEDVEAFADALESLPKPVLAHCRSG-TRASAL 102 (110)
T ss_dssp -HHHHHHHHHHHHTTTTSEEEE-SCS-HHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEEECCCC-hhHHHH
Confidence 5677777778887654 445556555 444443
No 275
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=24.53 E-value=88 Score=25.65 Aligned_cols=27 Identities=30% Similarity=0.228 Sum_probs=19.7
Q ss_pred eEEEEECCeEEEEEcCCccCCcEEEec
Q 005830 136 KTKVLRDGRWSEQDASILVPGDVISIK 162 (675)
Q Consensus 136 ~~~V~r~g~~~~i~~~~L~~GDiv~l~ 162 (675)
...+.++++.+.+.+++|++||.|.+.
T Consensus 73 ~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 73 LLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 344555666567889999999998764
No 276
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=24.07 E-value=2.1e+02 Score=26.99 Aligned_cols=93 Identities=16% Similarity=0.168 Sum_probs=55.5
Q ss_pred ccCCCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCCCCCCCCCccCCccccccCcccHHHHhhhcCEEEec
Q 005830 490 LFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQDKDASIAALPVDELIEKADGFAGV 569 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 569 (675)
+.-++=||+.++|++-+++|+++.+-|..+.. |+++=..+. +..++..++ .-+...
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~-----AQkL~Fghs----------------~agdL~~lf---sGyfDt 155 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVK-----AQKLFFGHS----------------DAGDLNSLF---SGYFDT 155 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCch-----hHHHhhccc----------------ccccHHhhh---cceeec
Confidence 45678899999999999999999999877643 222211110 001111111 112222
Q ss_pred CHH------HHHHHHHHHHhCCCEEEEECCCccCHHHHHhCCc
Q 005830 570 FPE------HKYEIVKRLQERKHICGMTGDGVNDAPALKKADI 606 (675)
Q Consensus 570 ~p~------~K~~iv~~l~~~~~~v~~iGDg~ND~~al~~A~v 606 (675)
+-- .=.+|++..--..+.+++..|..+...|-+.+++
T Consensus 156 tiG~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 156 TIGKKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGL 198 (229)
T ss_pred cccccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcch
Confidence 222 2244555554456779999999998887655544
No 277
>PF05240 APOBEC_C: APOBEC-like C-terminal domain; InterPro: IPR007904 This domain is found at the C terminus of the Apolipoprotein B mRNA editing enzyme. Apobec-1 catalyzes C to U editing of apolipoprotein B (apoB) mRNA in the mammalian intestine. C to U RNA editing of mammalian apolipoprotein B (apoB) RNA is a site-specific posttranscriptional modification in which a single cytidine is enzymatically deaminated to uridine, thereby generating a UAA stop codon in the edited mRNA. The function of this domain is currently unknown.; GO: 0008270 zinc ion binding, 0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines; PDB: 2NYT_D.
Probab=23.89 E-value=82 Score=23.34 Aligned_cols=25 Identities=28% Similarity=0.422 Sum_probs=18.6
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCH
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQL 520 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~ 520 (675)
|+-++.++.|.++|++|-|.|-+..
T Consensus 2 ~~~qegLr~L~~aG~~v~iM~~~eF 26 (55)
T PF05240_consen 2 PDYQEGLRRLCQAGAQVSIMTYSEF 26 (55)
T ss_dssp HHHHHHHHHHHHTT-EEEE--HHHH
T ss_pred cHHHHHHHHHHHCCCeEEecCcHHH
Confidence 5678999999999999999986543
No 278
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=23.85 E-value=5.7e+02 Score=25.51 Aligned_cols=52 Identities=21% Similarity=0.208 Sum_probs=43.2
Q ss_pred CCCCcEEEEEecccCCCCcchHHHHHHHHhC---CCeEEEEcCCCHHHHHHHHHH
Q 005830 478 PGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (675)
Q Consensus 478 ~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~---gi~v~~~TGd~~~~a~~ia~~ 529 (675)
...+|.=+=++.=.+.+-|+..++++.++.. |..++-.+-|++..|++++..
T Consensus 89 ~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 89 LGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred hCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 3456667777777888899999999999998 999997778888888888765
No 279
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=23.71 E-value=1.3e+02 Score=24.48 Aligned_cols=48 Identities=15% Similarity=0.207 Sum_probs=37.2
Q ss_pred EEecccC---CCCcchHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHhCCC
Q 005830 486 GLLPLFD---PPRHDSAETIRRALNLGVNVKMI-TGDQLAIGKETGRRLGMG 533 (675)
Q Consensus 486 G~i~~~d---~lr~~~~~~i~~l~~~gi~v~~~-TGd~~~~a~~ia~~~gi~ 533 (675)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|++
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4555666 66777888899999999998887 566677777888888874
No 280
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.69 E-value=1.6e+02 Score=30.31 Aligned_cols=45 Identities=20% Similarity=0.237 Sum_probs=31.5
Q ss_pred ccCCCCcchHHHHHHHHhC-CCeE---EEEcCCCHHHH------HHHHHHhCCCC
Q 005830 490 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIG------KETGRRLGMGT 534 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~-gi~v---~~~TGd~~~~a------~~ia~~~gi~~ 534 (675)
+.+++|++.++.++.+++. |++. +++-||++... ...|+++||..
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~ 64 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIAS 64 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEE
Confidence 4566788888889888776 7653 55668886544 44677888854
No 281
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=22.97 E-value=4.2e+02 Score=26.34 Aligned_cols=41 Identities=22% Similarity=0.088 Sum_probs=29.2
Q ss_pred ecCHHHHHHHHHHHHhCCCEEEEECCCc-cCHHHHHhCCccE
Q 005830 568 GVFPEHKYEIVKRLQERKHICGMTGDGV-NDAPALKKADIGI 608 (675)
Q Consensus 568 r~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~al~~A~vgi 608 (675)
+-.|+-=..+.+.+......++||||.. +|..+-+.+++-.
T Consensus 178 KP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ 219 (249)
T TIGR01457 178 KPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDT 219 (249)
T ss_pred CChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcE
Confidence 3334444455555554567899999996 8999999999943
No 282
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=22.91 E-value=1.6e+02 Score=31.21 Aligned_cols=41 Identities=24% Similarity=0.278 Sum_probs=31.7
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCC-----HHHHHHHHHHhCCC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQ-----LAIGKETGRRLGMG 533 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~-----~~~a~~ia~~~gi~ 533 (675)
.+.++.+..+..++++||+++.-+|-- ......+|++.|+.
T Consensus 55 ~~~~~L~~~L~~~~~~gIkvI~NaGg~np~~~a~~v~eia~e~Gl~ 100 (362)
T PF07287_consen 55 DFVRDLRPLLPAAAEKGIKVITNAGGLNPAGCADIVREIARELGLS 100 (362)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHHHHhcCCC
Confidence 345688899999999999999988743 24556778888875
No 283
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=22.80 E-value=2e+02 Score=24.70 Aligned_cols=22 Identities=27% Similarity=0.312 Sum_probs=10.4
Q ss_pred HhHHHHHHHHHhcCCCeEEEEE
Q 005830 120 NNAGNAAAALMANLAPKTKVLR 141 (675)
Q Consensus 120 ~~~~~~~~~l~~~~~~~~~V~r 141 (675)
+|+++..+++.+...+--+|+.
T Consensus 26 kKr~K~~~~m~~~Lk~GD~VvT 47 (109)
T PRK05886 26 RKAMQATIDLHESLQPGDRVHT 47 (109)
T ss_pred HHHHHHHHHHHHhcCCCCEEEE
Confidence 3444444455554444445554
No 284
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=22.78 E-value=4.2e+02 Score=26.55 Aligned_cols=39 Identities=18% Similarity=0.223 Sum_probs=24.6
Q ss_pred CCCCcchHHHHHHHHhCCCeEE-EEcCCCH-HHHHHHHHHh
Q 005830 492 DPPRHDSAETIRRALNLGVNVK-MITGDQL-AIGKETGRRL 530 (675)
Q Consensus 492 d~lr~~~~~~i~~l~~~gi~v~-~~TGd~~-~~a~~ia~~~ 530 (675)
|.+-++..+.++.+++.|+..+ +++-..+ +....+++..
T Consensus 123 Dlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 123 DLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred CCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 4444677888888888888744 5655443 3445555554
No 285
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=22.78 E-value=56 Score=24.00 Aligned_cols=13 Identities=38% Similarity=0.557 Sum_probs=10.7
Q ss_pred cCCcEEEecCCCe
Q 005830 154 VPGDVISIKLGDI 166 (675)
Q Consensus 154 ~~GDiv~l~~G~~ 166 (675)
.+||+|.|+.|-.
T Consensus 2 ~~GDvV~LKSGGp 14 (53)
T PF09926_consen 2 KIGDVVQLKSGGP 14 (53)
T ss_pred CCCCEEEEccCCC
Confidence 5899999998853
No 286
>PRK13938 phosphoheptose isomerase; Provisional
Probab=22.77 E-value=1.6e+02 Score=28.28 Aligned_cols=55 Identities=18% Similarity=0.201 Sum_probs=39.9
Q ss_pred hHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCH
Q 005830 442 EDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 520 (675)
Q Consensus 442 ~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~ 520 (675)
....+.+.........+|--++++++.. --+++.++++.+++.|++++.+||...
T Consensus 97 ~~~~~~~~~~~~~~~~~~DllI~iS~SG------------------------~t~~vi~a~~~Ak~~G~~vI~iT~~~~ 151 (196)
T PRK13938 97 YDYDTVFARALEGSARPGDTLFAISTSG------------------------NSMSVLRAAKTARELGVTVVAMTGESG 151 (196)
T ss_pred ccHHHHHHHHHHhcCCCCCEEEEEcCCC------------------------CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 3444555566666666676666666654 246889999999999999999998764
No 287
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=22.76 E-value=1.6e+02 Score=23.87 Aligned_cols=14 Identities=29% Similarity=0.245 Sum_probs=11.2
Q ss_pred CCccCCcEEEecCC
Q 005830 151 SILVPGDVISIKLG 164 (675)
Q Consensus 151 ~~L~~GDiv~l~~G 164 (675)
++|+|||-|....|
T Consensus 36 ~~L~~Gd~VvT~gG 49 (84)
T TIGR00739 36 ESLKKGDKVLTIGG 49 (84)
T ss_pred HhCCCCCEEEECCC
Confidence 57888888887776
No 288
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=22.75 E-value=91 Score=27.66 Aligned_cols=80 Identities=13% Similarity=0.190 Sum_probs=53.7
Q ss_pred HHHHcCCeEEEEEeeccCCcC-CCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCC-eEEEEcCCCH-------HHHH
Q 005830 454 KFAERGLRSLGVARQEIPEKT-KESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV-NVKMITGDQL-------AIGK 524 (675)
Q Consensus 454 ~~~~~G~r~l~~a~~~~~~~~-~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi-~v~~~TGd~~-------~~a~ 524 (675)
-+...|+.|+.++.+.-+++- ....+.+-.++|+-++--.--+..+++++.|+++|+ .+.++=|-.. ....
T Consensus 22 ~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~ 101 (128)
T cd02072 22 AFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVE 101 (128)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHH
Confidence 455789999988876533321 112244557899888888888999999999999998 5544444432 2233
Q ss_pred HHHHHhCCC
Q 005830 525 ETGRRLGMG 533 (675)
Q Consensus 525 ~ia~~~gi~ 533 (675)
...+++|..
T Consensus 102 ~~L~~~Gv~ 110 (128)
T cd02072 102 KRFKEMGFD 110 (128)
T ss_pred HHHHHcCCC
Confidence 557778864
No 289
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=22.71 E-value=3.9e+02 Score=23.02 Aligned_cols=26 Identities=23% Similarity=0.238 Sum_probs=22.9
Q ss_pred cchHHHHHHHHhCCCeEEEEcCCCHH
Q 005830 496 HDSAETIRRALNLGVNVKMITGDQLA 521 (675)
Q Consensus 496 ~~~~~~i~~l~~~gi~v~~~TGd~~~ 521 (675)
++..++++.+++.|++++.+|++...
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~ 99 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANS 99 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCC
Confidence 57888999999999999999997653
No 290
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=22.71 E-value=56 Score=31.45 Aligned_cols=79 Identities=18% Similarity=0.312 Sum_probs=53.6
Q ss_pred HHHHHcCCeEEEEEeeccCCcCC--CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCC--eEEEEcCCCHHHHHHHHH
Q 005830 453 DKFAERGLRSLGVARQEIPEKTK--ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGV--NVKMITGDQLAIGKETGR 528 (675)
Q Consensus 453 ~~~~~~G~r~l~~a~~~~~~~~~--~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi--~v~~~TGd~~~~a~~ia~ 528 (675)
.-+...|++|+.++. ..|.++. .-.+.+-.++|+-.....--+..++.++.+|+.+. ++.++=|....+ ...++
T Consensus 104 ~~l~~~G~~vi~lG~-~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~-~~~~~ 181 (201)
T cd02070 104 TMLEANGFEVIDLGR-DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVN-QEFAD 181 (201)
T ss_pred HHHHHCCCEEEECCC-CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECCcCC-HHHHH
Confidence 356678999988773 3333321 11233457899998888888999999999999987 664444444433 35788
Q ss_pred HhCCC
Q 005830 529 RLGMG 533 (675)
Q Consensus 529 ~~gi~ 533 (675)
++|-+
T Consensus 182 ~~GaD 186 (201)
T cd02070 182 EIGAD 186 (201)
T ss_pred HcCCc
Confidence 88864
No 291
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=22.42 E-value=71 Score=29.50 Aligned_cols=24 Identities=17% Similarity=0.310 Sum_probs=20.6
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCC
Q 005830 495 RHDSAETIRRALNLGVNVKMITGD 518 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd 518 (675)
-+++.++|++|++.|++++|+|.-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred chhHHHHHHHHHhcCCeEEEEeCc
Confidence 457999999999999999999953
No 292
>PRK00208 thiG thiazole synthase; Reviewed
Probab=22.41 E-value=6.4e+02 Score=25.19 Aligned_cols=53 Identities=21% Similarity=0.197 Sum_probs=43.3
Q ss_pred CCCCCcEEEEEecccCCCCcchHHHHHHHHhC---CCeEEEEcCCCHHHHHHHHHH
Q 005830 477 SPGAPWQLVGLLPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIGKETGRR 529 (675)
Q Consensus 477 ~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~---gi~v~~~TGd~~~~a~~ia~~ 529 (675)
....+|.=+=+++=.+.+-|+..++++.++.. |..++-.+-|++..|++++.-
T Consensus 88 ~~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 88 ALGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred HhCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 34567777777877888899999999999998 999996777888888887764
No 293
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=22.16 E-value=6.1e+02 Score=30.00 Aligned_cols=157 Identities=14% Similarity=0.086 Sum_probs=78.2
Q ss_pred EECCeEEEEEcCCccCCcEEEecCCCeeeeeEEEEecCCeeEeeccccCCCcccccCCCCccccceeeeeceEEEEEEEe
Q 005830 140 LRDGRWSEQDASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPYDEVFSGSTCKQGEIEAVVIAT 219 (675)
Q Consensus 140 ~r~g~~~~i~~~~L~~GDiv~l~~G~~iPaD~~vl~g~~~~Vdes~LTGEs~pv~K~~~~~v~aGt~v~~g~~~~~V~~t 219 (675)
++-|....+...+.+|-|-+.++.. .-+|--.+.|++.-|+-. .|+. -..|..+..|+....=.-.+--...
T Consensus 261 l~~GDiv~v~~G~~IP~Dg~vi~g~--~~vdes~lTGEs~Pv~k~--~Gd~----V~aGt~~~~G~~~i~V~~~g~~s~l 332 (741)
T PRK11033 261 LRPGDVIEVAAGGRLPADGKLLSPF--ASFDESALTGESIPVERA--TGEK----VPAGATSVDRLVTLEVLSEPGASAI 332 (741)
T ss_pred CCCCCEEEECCCCEEecceEEEECc--EEeecccccCCCCCEecC--CCCe----eccCCEEcCceEEEEEEeccccCHH
Confidence 3567888888888888888877642 345777777754333322 1332 2346666666554331111111222
Q ss_pred cchhhhhhhh-hhhhccC-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHhccCcchHH
Q 005830 220 GVHTFFGKAA-HLVDSTN-QVGHFQKVLTAIGNFCICSIAVGIVAEIIIMYPVQHRKYRDGIDNLLVLLIGGIPIAMPTV 297 (675)
Q Consensus 220 G~~T~~g~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iP~~l~~~ 297 (675)
|. +.++. +...+.. -....++....+....+.+.++.+++..++....+...+..++...+..+.+++..+.|++
T Consensus 333 ~~---I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a 409 (741)
T PRK11033 333 DR---ILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAA 409 (741)
T ss_pred HH---HHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHH
Confidence 21 11111 1122222 1222344444444443322222222221221111122344556667777888888888888
Q ss_pred HHHHHHHHHH
Q 005830 298 LSVTMAIGSH 307 (675)
Q Consensus 298 ~~~~~~~~~~ 307 (675)
+..++..+++
T Consensus 410 ~~~~l~~aar 419 (741)
T PRK11033 410 ITSGLAAAAR 419 (741)
T ss_pred HHHHHHHHHH
Confidence 8888877664
No 294
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.95 E-value=2.1e+02 Score=29.33 Aligned_cols=45 Identities=9% Similarity=0.159 Sum_probs=31.6
Q ss_pred ccCCCCcchHHHHHHHHhC-CCeE---EEEcCCCHHHH------HHHHHHhCCCC
Q 005830 490 LFDPPRHDSAETIRRALNL-GVNV---KMITGDQLAIG------KETGRRLGMGT 534 (675)
Q Consensus 490 ~~d~lr~~~~~~i~~l~~~-gi~v---~~~TGd~~~~a------~~ia~~~gi~~ 534 (675)
+..+++++.++-++.+++. |++. +++-||++... ...|+++||..
T Consensus 9 iA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (293)
T PRK14185 9 ISAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKS 63 (293)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788888899999877 7653 55668886543 45677888854
No 295
>PRK13670 hypothetical protein; Provisional
Probab=21.91 E-value=4.7e+02 Score=28.13 Aligned_cols=97 Identities=13% Similarity=0.144 Sum_probs=66.3
Q ss_pred EEEEEecccCCCCcchHHHHHHHHh---CCCeEEEEcCC----------CHHHHHHHHHHhCCCCCCCCCCCccCCcccc
Q 005830 483 QLVGLLPLFDPPRHDSAETIRRALN---LGVNVKMITGD----------QLAIGKETGRRLGMGTNMYPSSSLLGQDKDA 549 (675)
Q Consensus 483 ~~lG~i~~~d~lr~~~~~~i~~l~~---~gi~v~~~TGd----------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~ 549 (675)
..+|+|+==|++..|=...|+++++ +|..+++++|+ +...=..+|.++|++-...
T Consensus 2 k~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD~vie------------ 69 (388)
T PRK13670 2 KVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVDLVVE------------ 69 (388)
T ss_pred ceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCCEEEE------------
Confidence 4689999999999999999988775 47777777776 2233345566666532100
Q ss_pred ccCcccHHHHhhhcCEEEecCHHHHHH-HHHHHHhCCCEEEEECCCccCHHHHHh
Q 005830 550 SIAALPVDELIEKADGFAGVFPEHKYE-IVKRLQERKHICGMTGDGVNDAPALKK 603 (675)
Q Consensus 550 ~~~~~~~~~~~~~~~v~~r~~p~~K~~-iv~~l~~~~~~v~~iGDg~ND~~al~~ 603 (675)
. .. .|+..+|++-.+ -|+.|...|-..+.+|....|...|+.
T Consensus 70 ----l-------pf-~~a~~sae~F~~~aV~iL~~l~v~~lv~G~e~g~~~~L~~ 112 (388)
T PRK13670 70 ----L-------PF-LYSVQSADFFAEGAVSILDALGVDSLVFGSESGDIEDFQK 112 (388)
T ss_pred ----e-------CC-chHhCCHHHHHHhHHHHHHHcCCCEEEEcCCCCCHHHHHH
Confidence 0 01 278888887765 455666667778899998888776654
No 296
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=21.67 E-value=3.6e+02 Score=25.82 Aligned_cols=57 Identities=11% Similarity=0.123 Sum_probs=41.5
Q ss_pred ChHHHHHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCeEEEEcCCCH
Q 005830 441 REDVRKKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQL 520 (675)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~v~~~TGd~~ 520 (675)
+....+.+..++..+..+|--.+++++.. --+++.++++.+|+.|.+++.+||...
T Consensus 92 d~~~~~~f~~ql~~~~~~gDvli~iS~SG------------------------~s~~v~~a~~~Ak~~G~~vI~IT~~~~ 147 (196)
T PRK10886 92 DRLHDEVYAKQVRALGHAGDVLLAISTRG------------------------NSRDIVKAVEAAVTRDMTIVALTGYDG 147 (196)
T ss_pred cccHHHHHHHHHHHcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 33445556666667777776666666654 136899999999999999999999764
Q ss_pred H
Q 005830 521 A 521 (675)
Q Consensus 521 ~ 521 (675)
.
T Consensus 148 s 148 (196)
T PRK10886 148 G 148 (196)
T ss_pred C
Confidence 3
No 297
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=21.39 E-value=8.4e+02 Score=24.49 Aligned_cols=28 Identities=21% Similarity=0.299 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHhCCCEEEEECCCccCHH
Q 005830 572 EHKYEIVKRLQERKHICGMTGDGVNDAP 599 (675)
Q Consensus 572 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~ 599 (675)
..-.+.++.+++....-.++|-|.++..
T Consensus 186 ~~~~~~i~~vk~~~~~pv~vGfGI~~~e 213 (258)
T PRK13111 186 ADLAELVARLKAHTDLPVAVGFGISTPE 213 (258)
T ss_pred ccHHHHHHHHHhcCCCcEEEEcccCCHH
Confidence 3445577777766455566788885543
No 298
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=21.14 E-value=92 Score=26.98 Aligned_cols=26 Identities=23% Similarity=0.158 Sum_probs=22.9
Q ss_pred CcchHHHHHHHHhCCCeEEEEcCCCH
Q 005830 495 RHDSAETIRRALNLGVNVKMITGDQL 520 (675)
Q Consensus 495 r~~~~~~i~~l~~~gi~v~~~TGd~~ 520 (675)
-+++.++++.+++.|.+++.+|+...
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~ 84 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVG 84 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCC
Confidence 45799999999999999999998754
No 299
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=21.08 E-value=5.4e+02 Score=22.13 Aligned_cols=14 Identities=36% Similarity=0.589 Sum_probs=10.2
Q ss_pred CCccCCcEEEecCC
Q 005830 151 SILVPGDVISIKLG 164 (675)
Q Consensus 151 ~~L~~GDiv~l~~G 164 (675)
++|+|||-|.-..|
T Consensus 37 ~~Lk~GD~VvT~gG 50 (109)
T PRK05886 37 ESLQPGDRVHTTSG 50 (109)
T ss_pred HhcCCCCEEEECCC
Confidence 47788888777665
No 300
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=20.83 E-value=1.7e+02 Score=27.22 Aligned_cols=82 Identities=20% Similarity=0.292 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHcCCeEEEEEeeccCCcCCCCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCe---EEEEcCCCHHH
Q 005830 446 KKVHAVIDKFAERGLRSLGVARQEIPEKTKESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN---VKMITGDQLAI 522 (675)
Q Consensus 446 ~~~~~~~~~~~~~G~r~l~~a~~~~~~~~~~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~---v~~~TGd~~~~ 522 (675)
++..+.+.++...|.+++.++-.. + .....=..-+|+=.+---.+|-....=+.|++.++. |+|+ ||...|
T Consensus 49 pe~~~W~~e~k~~gi~v~vvSNn~---e--~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV-GDqL~T 122 (175)
T COG2179 49 PELRAWLAELKEAGIKVVVVSNNK---E--SRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV-GDQLFT 122 (175)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCC---H--HHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEE-cchhhh
Confidence 345566778889999999887422 0 001100122344444444566666666666666664 6666 999999
Q ss_pred HHHHHHHhCCC
Q 005830 523 GKETGRRLGMG 533 (675)
Q Consensus 523 a~~ia~~~gi~ 533 (675)
=..-|+..|+-
T Consensus 123 DVlggnr~G~~ 133 (175)
T COG2179 123 DVLGGNRAGMR 133 (175)
T ss_pred hhhcccccCcE
Confidence 99999999984
No 301
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.79 E-value=1.8e+02 Score=22.89 Aligned_cols=47 Identities=17% Similarity=0.237 Sum_probs=34.9
Q ss_pred EecccCCCCcchHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHhCCC
Q 005830 487 LLPLFDPPRHDSAETIRRALNLGVNVKMIT-GDQLAIGKETGRRLGMG 533 (675)
Q Consensus 487 ~i~~~d~lr~~~~~~i~~l~~~gi~v~~~T-Gd~~~~a~~ia~~~gi~ 533 (675)
++.+.++.++.+.+..+.||+.|+++.+.. +.+.......|+..|+.
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 344556677788888999999999987754 44667777778877763
No 302
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=20.75 E-value=57 Score=31.34 Aligned_cols=78 Identities=13% Similarity=0.172 Sum_probs=53.9
Q ss_pred HHHHHcCCeEEEEEeeccCCcCC--CCCCCCcEEEEEecccCCCCcchHHHHHHHHhCCCe--E-EEEcCCCHHHHHHHH
Q 005830 453 DKFAERGLRSLGVARQEIPEKTK--ESPGAPWQLVGLLPLFDPPRHDSAETIRRALNLGVN--V-KMITGDQLAIGKETG 527 (675)
Q Consensus 453 ~~~~~~G~r~l~~a~~~~~~~~~--~~~e~~l~~lG~i~~~d~lr~~~~~~i~~l~~~gi~--v-~~~TGd~~~~a~~ia 527 (675)
.-+...|++|+.++.+- |.++. .-.+.+-.++|+-....+-.+..++.++.|++.|.+ + +++-|.. .+ ...+
T Consensus 106 ~~l~~~G~~vi~LG~~v-p~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~-~~-~~~~ 182 (197)
T TIGR02370 106 TMLRANGFDVIDLGRDV-PIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAP-VT-QDWA 182 (197)
T ss_pred HHHHhCCcEEEECCCCC-CHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChh-cC-HHHH
Confidence 34567899999887543 32221 111334468999999899999999999999999875 4 5555544 33 4678
Q ss_pred HHhCCC
Q 005830 528 RRLGMG 533 (675)
Q Consensus 528 ~~~gi~ 533 (675)
+++|-+
T Consensus 183 ~~~gad 188 (197)
T TIGR02370 183 DKIGAD 188 (197)
T ss_pred HHhCCc
Confidence 888864
No 303
>TIGR02988 YaaA_near_RecF S4 domain protein YaaA. This small protein has a single S4 domain (pfam01479), as do bacterial ribosomal protein S4, some pseudouridine synthases, tyrosyl-tRNA synthetases. The S4 domain may bind RNA. Members of this protein family are found almost exclusively in the Firmicutes, and almost invariably just a few nucleotides upstream of the gene for the DNA replication and repair protein RecF. The few members of this family that are not near recF are found instead near dnaA and/or dnaN, the usual neighbors of recF, near the origin of replication. The conserved location suggests a possible role in replication in the Firmicutes lineage.
Probab=20.64 E-value=91 Score=23.15 Aligned_cols=23 Identities=43% Similarity=0.697 Sum_probs=18.8
Q ss_pred EEECCeEEEEEcCCccCCcEEEe
Q 005830 139 VLRDGRWSEQDASILVPGDVISI 161 (675)
Q Consensus 139 V~r~g~~~~i~~~~L~~GDiv~l 161 (675)
|.-||+...-+...|.+||.|.+
T Consensus 36 V~VNg~~~~~~~~~l~~Gd~v~i 58 (59)
T TIGR02988 36 VLVNGELENRRGKKLYPGDVIEI 58 (59)
T ss_pred EEECCEEccCCCCCCCCCCEEEe
Confidence 44588877777899999999976
No 304
>COG1862 YajC Preprotein translocase subunit YajC [Intracellular trafficking and secretion]
Probab=20.54 E-value=2.2e+02 Score=23.95 Aligned_cols=48 Identities=19% Similarity=0.164 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCeEEEEECCeEEEEEcCCccCCcEEEecCC
Q 005830 100 DFVGIIVLLVINSTISFIEENNAGNAAAALMANLAPKTKVLRDGRWSEQDASILVPGDVISIKLG 164 (675)
Q Consensus 100 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~r~g~~~~i~~~~L~~GDiv~l~~G 164 (675)
....++.++++..+..|..-+..+++.++.++... +|++||-|...-|
T Consensus 8 ~~~~ll~~vl~~~ifyFli~RPQrKr~K~~~~ml~-----------------sL~kGD~VvT~gG 55 (97)
T COG1862 8 GLVLLLPLVLIFAIFYFLIIRPQRKRMKEHQELLN-----------------SLKKGDEVVTIGG 55 (97)
T ss_pred cHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHH-----------------hccCCCEEEEcCC
No 305
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=20.42 E-value=70 Score=29.35 Aligned_cols=27 Identities=33% Similarity=0.385 Sum_probs=23.2
Q ss_pred hhhhcCceEEEecCCCccccCceeeee
Q 005830 322 IEEMAGMDVLCSDKTGTLTLNKLTVDR 348 (675)
Q Consensus 322 le~lg~v~~i~~DKTGTLT~~~~~v~~ 348 (675)
.+.+.++..+++|=-||||.|++-+..
T Consensus 2 ~~ra~~IkLli~DVDGvLTDG~ly~~~ 28 (170)
T COG1778 2 IARAKNIKLLILDVDGVLTDGKLYYDE 28 (170)
T ss_pred hhhhhhceEEEEeccceeecCeEEEcC
Confidence 467788999999999999999987753
No 306
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=20.16 E-value=1.5e+02 Score=29.37 Aligned_cols=38 Identities=24% Similarity=0.227 Sum_probs=33.8
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 005830 497 DSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (675)
Q Consensus 497 ~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 534 (675)
-..+.|+.|+++|+.|+-++-|...+-..+-+++||..
T Consensus 197 ~l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 197 ILKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 34677899999999999999999999999999999964
No 307
>KOG3416 consensus Predicted nucleic acid binding protein [General function prediction only]
Probab=20.13 E-value=66 Score=28.10 Aligned_cols=15 Identities=33% Similarity=0.718 Sum_probs=12.5
Q ss_pred CCccCCcEEEecCCC
Q 005830 151 SILVPGDVISIKLGD 165 (675)
Q Consensus 151 ~~L~~GDiv~l~~G~ 165 (675)
+.++|||||++..|-
T Consensus 60 ~~~~PGDIirLt~Gy 74 (134)
T KOG3416|consen 60 CLIQPGDIIRLTGGY 74 (134)
T ss_pred cccCCccEEEecccc
Confidence 458999999998874
No 308
>COG4996 Predicted phosphatase [General function prediction only]
Probab=20.10 E-value=1.8e+02 Score=25.82 Aligned_cols=42 Identities=19% Similarity=0.060 Sum_probs=38.4
Q ss_pred CCCcchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHhCCCC
Q 005830 493 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGT 534 (675)
Q Consensus 493 ~lr~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 534 (675)
.++++++++++.+|+.|.-+...|=.-+..|...-+.+++..
T Consensus 41 ~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~ 82 (164)
T COG4996 41 HLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQ 82 (164)
T ss_pred EEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhh
Confidence 478999999999999999999999999999999999999864
Done!