BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005831
(675 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q923Q2|STA13_MOUSE StAR-related lipid transfer protein 13 OS=Mus musculus GN=Stard13
PE=1 SV=5
Length = 1113
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 230 RSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE-DDGTYVIL 288
R +WD F + VVE LD T+ I++ + + +P RD L+ R W+ + G ++
Sbjct: 974 RHLWDEDFVQWKVVERLDKQTE-IYQYVLNSMVP--HPSRDFLVLRTWKTDLPKGMCTLV 1030
Query: 289 YHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWK 335
SV +++ + G VRA + Y+I P G KS + H+ ID K
Sbjct: 1031 SLSVEYEEA-QLMGGVRAVVMDSQYLIEPCGSG-KSRLTHICRIDLK 1075
>sp|Q9Y3M8|STA13_HUMAN StAR-related lipid transfer protein 13 OS=Homo sapiens GN=STARD13
PE=1 SV=2
Length = 1113
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 230 RSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLLLRRYWRRE-DDGTYVIL 288
R +WD F + VVE LD T+ I++ + + P RD ++ R W+ + G ++
Sbjct: 974 RHLWDEDFVQWKVVETLDRQTE-IYQYVLNSMAP--HPSRDFVVLRTWKTDLPKGMCTLV 1030
Query: 289 YHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLAIDWK 335
SV H++ + G VRA + Y+I P G KS + H+ ID K
Sbjct: 1031 SLSVEHEEA-QLLGGVRAVVMDSQYLIEPCGSG-KSRLTHICRIDLK 1075
>sp|F7EL49|AF1L1_XENTR Actin filament-associated protein 1-like 1 OS=Xenopus tropicalis
GN=afap1l1 PE=3 SV=1
Length = 758
Score = 39.7 bits (91), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 13 EGWLHLIRSNRIGLQYSRKRYF--------LLEDHFLKSFKSVPHSKNEDPVRSAIIDSC 64
E LHL+R +RI RK+ F L++D+ L +KS SK+ P + C
Sbjct: 208 EASLHLVRDSRICAFLLRKKRFGQWAKQLTLIKDNKLLCYKS---SKDRQPHLEIPLALC 264
Query: 65 --IRVTDNGRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGPH 122
V +GR H F+L N + L L S E+A +W+ ++E P
Sbjct: 265 NVAYVPKDGRRKKHE---LRFSLPN----GEMLVLAVQSREQAEEWLRVIKEVI---SPS 314
Query: 123 QGVGDHIGCPNSPWESFRLSGSSRASHTKSID 154
G P SP RL R SH K+ D
Sbjct: 315 TG-----SSPASPALRHRLDLDKRLSHDKTSD 341
>sp|Q9JMD3|PCTL_MOUSE PCTP-like protein OS=Mus musculus GN=Stard10 PE=1 SV=1
Length = 291
Score = 39.7 bits (91), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 213 DGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLL 272
D +E ++ L + R WD + L + D+ + YS P +K RD++
Sbjct: 76 DVPAETLYDVLHDI-EYRKKWDSNVIETFDIARLTVNADVGY---YSWRCPKPLKNRDVI 131
Query: 273 LRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLA 331
R W Y+I+ +SV H K P +K VRA GY+I + G KS V LA
Sbjct: 132 TLRSWLPMG-ADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLI--QSTGPKSCVITYLA 187
>sp|Q9Y365|PCTL_HUMAN PCTP-like protein OS=Homo sapiens GN=STARD10 PE=1 SV=2
Length = 291
Score = 39.3 bits (90), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Query: 213 DGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQLYSDWLPWGMKRRDLL 272
D +E ++ L + R WD + L + D+ + YS P +K RD++
Sbjct: 76 DVPAETLYDVLHDI-EYRKKWDSNVIETFDIARLTVNADVGY---YSWRCPKPLKNRDVI 131
Query: 273 LRRYWRREDDGTYVILYHSVFHKKCPRQKGSVRACLKSGGYVITPMNHGKKSVVKHMLA 331
R W Y+I+ +SV H K P +K VRA GY+I + G KS V LA
Sbjct: 132 TLRSWLPMG-ADYIIMNYSVKHPKYPPRKDLVRAVSIQTGYLI--QSTGPKSCVITYLA 187
>sp|Q8TED9|AF1L1_HUMAN Actin filament-associated protein 1-like 1 OS=Homo sapiens
GN=AFAP1L1 PE=1 SV=2
Length = 768
Score = 37.0 bits (84), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 26/150 (17%)
Query: 13 EGWLHLIRSNRIGLQYSRKRYF---------LLEDHFLKSFKSVPHSKNEDPVRSAIIDS 63
E +HL+R RI RK+ F + ED L +KS SK+ P +D+
Sbjct: 212 EASMHLVRECRICAFLLRKKRFGQWAKQLTVIREDQLL-CYKS---SKDRQPHLRLALDT 267
Query: 64 C--IRVTDNGRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGP 121
C I V + R H F T + L L S E+A +W+ ++E + G
Sbjct: 268 CSIIYVPKDSRHKRHELRF-------TQGATEVLVLALQSREQAEEWLKVIREVSKPVGG 320
Query: 122 HQGVGDHIGCPNSPWESFRLSGSSRASHTK 151
+GV P SP +L R S K
Sbjct: 321 AEGV----EVPRSPVLLCKLDLDKRLSQEK 346
>sp|Q4KWH8|PLCH1_HUMAN 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1
OS=Homo sapiens GN=PLCH1 PE=1 SV=1
Length = 1693
Score = 36.6 bits (83), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 32 RYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNGRES--IHRKV------FFIF 83
R F L++H + + P K+E +IDS +VT+ GR+S HR+ F
Sbjct: 40 RLFYLDEHRTR-LRWRPSRKSEKA--KILIDSIYKVTE-GRQSEIFHRQAEGNFDPSCCF 95
Query: 84 TLYNTSNHNDQLKLGASSPEEAAKWIHSLQ 113
T+Y+ NH + L L S+PEEA WI L+
Sbjct: 96 TIYH-GNHMESLDLITSNPEEARTWITGLK 124
>sp|Q4KWH5|PLCH1_MOUSE 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1
OS=Mus musculus GN=Plch1 PE=2 SV=1
Length = 1682
Score = 36.6 bits (83), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 32 RYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNGRES--IHRKV------FFIF 83
R F L++H + + P K+E +IDS +VT+ GR+S HR+ F
Sbjct: 40 RLFYLDEHRTR-LRWRPSRKSEKA--KILIDSIYKVTE-GRQSEIFHRQAEGNFDPSCCF 95
Query: 84 TLYNTSNHNDQLKLGASSPEEAAKWIHSLQ 113
T+Y+ NH + L L S+PEEA WI L+
Sbjct: 96 TIYH-GNHMESLDLITSNPEEARTWITGLK 124
>sp|B4S4U8|RUVA_PROA2 Holliday junction ATP-dependent DNA helicase RuvA
OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413)
GN=ruvA PE=3 SV=1
Length = 200
Score = 35.8 bits (81), Expect = 1.0, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 157 LCSGTHMEQVTADVIAPSPWTIFGC-----QNGLRLFKEGKDRGSRGKWDDHPAIMAVGV 211
+ SG +E++ ++A P T+FG + R+ E +DR + + G
Sbjct: 89 ILSGLPVEEIQEAIMANKPETLFGISGVGKKTAARIILELRDRILKLQQTRPGKTAGAGS 148
Query: 212 VDGTSEAIFQTLMSLGASRSVWDFCFYRGCVVEHLDGHTDIIHKQL 257
V SE Q LM+LG SR+ R + G DI+ + L
Sbjct: 149 VASLSEDALQALMTLGFSRASAQQAVTRALLSAENPGVEDIVREAL 194
>sp|Q4V8Y7|AF1L1_DANRE Actin filament-associated protein 1-like 1 OS=Danio rerio
GN=afap1l1 PE=2 SV=1
Length = 746
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 21/120 (17%)
Query: 18 LIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDSC--IRVTDNGRESI 75
L+R R G Q++ K+ ++ ++ L+ +KS SK++ P + C I V +GR
Sbjct: 221 LLRKKRFG-QWA-KQLTVIRENRLQCYKS---SKDQSPYTDIPLSLCSVIYVPKDGRRKK 275
Query: 76 HRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGPHQGVGDHIGCPNSP 135
H FTL + L L S E+A KW+H +++ G G+ + P+SP
Sbjct: 276 HE---LRFTLPG----GEALVLAVQSKEQAEKWLHVVRDVT-------GQGNGLDSPSSP 321
>sp|Q8BM47|PKHM3_MOUSE Pleckstrin homology domain-containing family M member 3 OS=Mus
musculus GN=Plekhm3 PE=1 SV=1
Length = 761
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 23 RIGLQYSRKRY-FLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNGRESIHRKVFF 81
R+ +Q + K + F+L +L +F P +EDP+ S +D C+ V + +
Sbjct: 370 RLTVQNNWKAFTFVLSKAYLMAFH--PGKLDEDPLLSYNVDVCLAVQIDNLDGCDSCFQV 427
Query: 82 IFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAA 116
IF D L+L A + + A +W+ +L+ AA
Sbjct: 428 IFP-------QDVLRLRAETRQRAQEWMEALKTAA 455
>sp|Q6ZWE6|PKHM3_HUMAN Pleckstrin homology domain-containing family M member 3 OS=Homo
sapiens GN=PLEKHM3 PE=2 SV=2
Length = 761
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 23 RIGLQYSRKRY-FLLEDHFLKSFKSVPHSKNEDPVRSAIIDSCIRVTDNGRESIHRKVFF 81
R+ +Q + K + F+L +L +F+ P +EDP+ S +D C+ V + +
Sbjct: 370 RLTVQNNWKAFTFVLSRAYLMAFQ--PGKLDEDPLLSYNVDVCLAVQMDNLDGCDSCFQV 427
Query: 82 IFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAA 116
IF D L+L A + + A +W+ +L+ AA
Sbjct: 428 IFP-------QDVLRLRAETRQRAQEWMEALKIAA 455
>sp|Q9H4M7|PKHA4_HUMAN Pleckstrin homology domain-containing family A member 4 OS=Homo
sapiens GN=PLEKHA4 PE=1 SV=2
Length = 779
Score = 32.7 bits (73), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 12 MEGWLHLIRSNRIGLQYSRKRYFLLEDHFLKSFKSVPHSKNEDPVRSAIIDS-CIRVTDN 70
+ GWLH + + GL+ ++R+F+L H L +K S+ E + S ++ S IR
Sbjct: 57 IRGWLH--KQDSSGLRLWKRRWFVLSGHCLFYYKD---SREESVLGSVLLPSYNIRPDGP 111
Query: 71 GRESIHRKVFFIFTLYNTSNHNDQLKLGASSPEEAAKWIHSLQEAALKGGPHQGVGDHIG 130
G R F FT + L A + E+ W+ +L A+ + GD G
Sbjct: 112 G---APRGRRFTFTAEHPGMRT--YVLAADTLEDLRGWLRALGRAS------RAEGDDYG 160
Query: 131 CPNSP 135
P SP
Sbjct: 161 QPRSP 165
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 267,026,227
Number of Sequences: 539616
Number of extensions: 11662535
Number of successful extensions: 23696
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 23692
Number of HSP's gapped (non-prelim): 24
length of query: 675
length of database: 191,569,459
effective HSP length: 124
effective length of query: 551
effective length of database: 124,657,075
effective search space: 68686048325
effective search space used: 68686048325
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)