Query 005842
Match_columns 674
No_of_seqs 289 out of 964
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 08:57:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005842.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005842hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 99.9 1.9E-22 6.5E-27 207.4 10.6 231 34-370 21-265 (279)
2 3htm_A Speckle-type POZ protei 99.9 7.4E-22 2.5E-26 187.6 10.7 133 26-175 15-148 (172)
3 2vkp_A BTB/POZ domain-containi 99.8 1.9E-21 6.7E-26 172.2 8.6 103 39-150 2-109 (109)
4 2if5_A Zinc finger and BTB dom 99.8 2.4E-21 8.1E-26 175.0 8.5 105 35-147 15-120 (120)
5 3hve_A Gigaxonin; ubiquitin, c 99.8 5.4E-21 1.8E-25 194.0 11.2 125 34-175 20-147 (256)
6 2vpk_A Myoneurin; transcriptio 99.8 3.8E-21 1.3E-25 172.9 8.4 103 35-148 12-116 (116)
7 1r29_A B-cell lymphoma 6 prote 99.8 4.8E-21 1.6E-25 174.9 9.2 106 34-148 18-125 (127)
8 3b84_A Zinc finger and BTB dom 99.8 1.8E-21 6.3E-26 176.4 6.2 104 35-149 14-117 (119)
9 1buo_A POZ domain, protein (pr 99.8 5.4E-21 1.8E-25 173.5 8.5 104 34-149 17-120 (121)
10 4eoz_A Speckle-type POZ protei 99.8 1.5E-21 5.2E-26 180.5 4.5 128 32-176 12-140 (145)
11 2yy9_A Zinc finger and BTB dom 99.8 2.3E-21 8E-26 179.8 5.4 107 34-151 14-120 (135)
12 2z8h_A Transcription regulator 99.8 7.9E-21 2.7E-25 176.4 7.8 112 33-153 24-136 (138)
13 3ga1_A Nucleus accumbens-assoc 99.8 4.3E-21 1.5E-25 176.1 5.5 104 35-149 23-127 (129)
14 2q81_A MIZ-1 protein; BTB/POZ 99.8 6E-21 2.1E-25 173.0 6.1 101 35-147 17-117 (119)
15 2ppi_A Gigaxonin; BTB domain, 99.8 7.8E-21 2.7E-25 178.4 6.7 106 34-147 36-144 (144)
16 3ohu_A Transcription regulator 99.8 5.1E-21 1.7E-25 174.2 4.4 104 34-146 21-125 (125)
17 3m5b_A Zinc finger and BTB dom 99.8 2.2E-20 7.4E-25 170.5 6.6 95 39-149 24-118 (119)
18 2ihc_A Transcription regulator 99.8 1.1E-20 3.9E-25 172.3 4.3 107 32-147 16-123 (124)
19 3hqi_A Speckle-type POZ protei 99.8 6.4E-19 2.2E-23 183.5 9.9 136 34-186 163-302 (312)
20 3fkc_A Transcriptional regulat 99.7 1.6E-18 5.5E-23 156.8 7.1 92 34-131 20-112 (116)
21 2ast_A S-phase kinase-associat 99.4 3.7E-13 1.3E-17 128.8 7.0 95 48-151 3-127 (159)
22 4ajy_C Transcription elongatio 99.2 3.3E-11 1.1E-15 106.3 7.0 79 48-129 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 1.6E-10 5.4E-15 108.6 7.3 92 48-151 4-122 (141)
24 2p1m_A SKP1-like protein 1A; F 98.9 2E-10 6.7E-15 110.2 1.0 93 48-151 6-126 (160)
25 1hv2_A Elongin C, ELC1; protei 98.4 5.1E-07 1.8E-11 80.0 6.5 79 48-129 6-99 (99)
26 2fnj_C Transcription elongatio 98.3 5.3E-07 1.8E-11 79.4 5.7 79 48-129 3-96 (96)
27 3v7d_A Suppressor of kinetocho 98.3 1.2E-06 4.2E-11 84.7 7.3 95 47-150 8-133 (169)
28 1vcb_B Protein (elongin C); tu 97.7 2.5E-05 8.4E-10 70.8 4.9 80 47-129 18-112 (112)
29 3drz_A BTB/POZ domain-containi 97.3 0.00055 1.9E-08 61.1 7.7 93 47-148 7-106 (107)
30 3drx_A BTB/POZ domain-containi 95.4 0.027 9.2E-07 56.0 7.2 94 47-149 13-113 (202)
31 3kvt_A Potassium channel prote 93.9 0.02 6.9E-07 51.9 2.0 82 48-132 7-92 (115)
32 1s1g_A Potassium voltage-gated 91.5 0.13 4.6E-06 47.0 3.9 80 47-132 14-99 (124)
33 1t1d_A Protein (potassium chan 90.5 0.21 7.1E-06 44.1 4.0 82 48-132 3-89 (100)
34 1nn7_A Potassium channel KV4.2 89.2 0.14 4.6E-06 45.5 1.8 85 48-143 2-92 (105)
35 2nz0_B Potassium voltage-gated 88.3 0.17 5.9E-06 47.3 1.9 82 45-132 34-121 (140)
36 2yy0_A C-MYC-binding protein; 81.1 2.2 7.7E-05 33.5 5.0 33 588-620 19-51 (53)
37 3vmx_A Voltage-gated hydrogen 72.1 6.5 0.00022 30.4 5.1 36 588-623 4-39 (48)
38 1deb_A APC protein, adenomatou 72.0 7 0.00024 30.4 5.3 39 584-622 13-51 (54)
39 1pd7_B MAD1; PAH2, SIN3, eukar 65.1 1.6 5.4E-05 29.4 0.4 17 115-131 3-19 (26)
40 3a2a_A Voltage-gated hydrogen 53.4 19 0.00066 28.5 4.7 35 589-623 12-46 (58)
41 2yy0_A C-MYC-binding protein; 47.5 20 0.00069 28.0 4.1 30 582-611 20-49 (53)
42 1vjh_A BET V I allergen family 44.2 14 0.00049 33.0 3.2 33 453-496 90-122 (122)
43 2r9r_B Paddle chimera voltage 42.4 19 0.00063 40.1 4.4 83 47-132 53-140 (514)
44 3vp9_A General transcriptional 38.6 30 0.001 30.1 4.2 26 594-619 49-74 (92)
45 1dip_A Delta-sleep-inducing pe 35.2 40 0.0014 28.2 4.1 33 586-618 13-45 (78)
46 1ci6_A Transcription factor AT 28.5 91 0.0031 24.9 5.2 34 585-618 27-60 (63)
47 2eqx_A Kelch repeat and BTB do 28.3 36 0.0012 29.3 3.0 34 111-150 7-40 (105)
48 3b0b_C CENP-X, centromere prot 26.7 46 0.0016 28.2 3.3 44 390-454 5-48 (81)
49 2wt7_B Transcription factor MA 24.8 1.1E+02 0.0036 26.6 5.3 37 585-621 52-88 (90)
50 3he5_A Synzip1; heterodimeric 22.0 1.6E+02 0.0053 22.0 4.9 38 582-619 11-48 (49)
51 1go4_E MAD1 (mitotic arrest de 21.2 84 0.0029 27.7 4.0 31 581-611 12-42 (100)
52 2j5u_A MREC protein; bacterial 21.2 63 0.0021 32.6 3.7 36 583-618 21-59 (255)
53 1a92_A Delta antigen; leucine 20.6 1E+02 0.0036 23.7 3.8 30 581-610 7-36 (50)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.87 E-value=1.9e-22 Score=207.42 Aligned_cols=231 Identities=12% Similarity=0.186 Sum_probs=160.1
Q ss_pred cchhhhhhcCCCeeEEEEEC---CEEEEecCccccccCHHHHHhhcCC-CCCCCceEecC------CCCCCHHHHHHHHH
Q 005842 34 RGQSWYVATDIPSDFLVQIG---DVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLD------DLPGGPEAFELAAK 103 (674)
Q Consensus 34 ~~~~~~r~~~~lcDV~v~V~---~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~I~L~------d~pgGaeafell~~ 103 (674)
++-+.+|.+|.+|||+|.|| |+.|++||.+|+++|+||++||++. .|+.+.+|+|+ +++ +++|+.+++
T Consensus 21 ~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~--~~~f~~ll~ 98 (279)
T 3i3n_A 21 WRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPE--PDTVEAVIE 98 (279)
T ss_dssp HHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCSC--HHHHHHHHH
T ss_pred HHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCCC--HHHHHHHHH
Confidence 34567899999999999998 9999999999999999999999986 77788899998 555 899999999
Q ss_pred hHhCceeecccchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhhhcchhhHHHHHhhccchHHHHHhhc---hhhHH
Q 005842 104 FCYGIAVDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQ---IVRRC 180 (674)
Q Consensus 104 FcYg~~i~it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v~~sw~~~i~~L~sC~~L~~~Ae~l~---iv~rc 180 (674)
|+|||++.++.+||..|+.||++|+|++ |++.|+.||.+.+.++ +|-.++.+|+.++ +.+.|
T Consensus 99 ~~Ytg~~~i~~~~v~~ll~~A~~l~i~~------L~~~c~~~L~~~l~~~---------n~~~i~~~A~~~~~~~L~~~~ 163 (279)
T 3i3n_A 99 YMYTGRIRVSTGSVHEVLELADRFLLIR------LKEFCGEFLKKKLHLS---------NCVAIHSLAHMYTLSQLALKA 163 (279)
T ss_dssp HHHHSEEEEETTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHCCTT---------THHHHHHHHHHTTCHHHHHHH
T ss_pred hhCcCCcccCHHHHHHHHHHHHHHCcHH------HHHHHHHHHHHcCCcc---------hHHHHHHHHHHcCcHHHHHHH
Confidence 9999999999999999999999999996 8999999999988654 4555556666655 33444
Q ss_pred HHHHHHHHccCCCCCcccccCCCCCCCCCCcCcCCCCCCCCCCCCCCCcchhhcccCChhHHHHHHHHHHHcCC-ChhhH
Q 005842 181 SESIAWKACANPKGIRWAYTGRPPKISSPKWNDMKDSSPSRSQPVPPDWWFEDVSILRIDHFVRVVTAIKVKGM-RFELI 259 (674)
Q Consensus 181 idsiA~kac~~~~~~~~~~~~~~~~~~S~~~~~~~~~~~~~~~~~~~dWW~eDl~~L~~~~f~rVi~am~~~g~-~~~~i 259 (674)
.+-|+.... .+ +-.++...|+.+.+..++..-.- .+ +.+.|
T Consensus 164 ~~~i~~~f~----~v---------------------------------~~~~~f~~L~~~~l~~lL~~d~L-~v~sE~~v 205 (279)
T 3i3n_A 164 ADMIRRNFH----KV---------------------------------IQDEEFYTLPFHLIRDWLSDLEI-TVDSEEVL 205 (279)
T ss_dssp HHHHHHTHH----HH---------------------------------TTSSGGGGSCHHHHHHHHTCSSC-CCSCHHHH
T ss_pred HHHHHHHHH----HH---------------------------------hcCcChhcCCHHHHHHHhcCcCC-CCCCHHHH
Confidence 444432211 11 00145567888888877743211 23 34566
Q ss_pred HHHHHHHHHHhcccccccCCCCcccccccccCCCCCCCCCCCCCcceeecCCCCCCcchhhhhhHHHHHHHHhhCCCCCC
Q 005842 260 GAAIMHYAAKWLTGLIRESSGTADEISSYSASNSNGSCSSWKGGLHMIVAGMKDDPPTVQAKDQRMIIESLISIIPPQKD 339 (674)
Q Consensus 260 ~~~l~~Ya~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~qr~llEtiv~lLP~ek~ 339 (674)
-.+++.|++.-.+ +++..+..+...+ -=.
T Consensus 206 f~av~~W~~~~~~-------------------------------------------------~r~~~~~~ll~~V--Rf~ 234 (279)
T 3i3n_A 206 FETVLKWVQRNAE-------------------------------------------------ERERYFEELFKLL--RLS 234 (279)
T ss_dssp HHHHHHHHHTTHH-------------------------------------------------HHTTTHHHHHTTS--CGG
T ss_pred HHHHHHHHHcCHH-------------------------------------------------HHHHHHHHHHHhc--CCC
Confidence 6666655542110 1112222332222 114
Q ss_pred cccHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 005842 340 SVSCSFLLRLLRMANMLKVAPALVTELEKRV 370 (674)
Q Consensus 340 ~vsc~fL~~LLR~A~~l~as~~cr~~LE~rI 370 (674)
.+|..+|..+++..-.+..++.|+.-|..-.
T Consensus 235 l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~ 265 (279)
T 3i3n_A 235 QMKPTYLTRHVKPERLVANNEVCVKLVADAV 265 (279)
T ss_dssp GSCHHHHHHTTTTSHHHHTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHhhccchhcCCHHHHHHHHHHH
Confidence 5789999998888777888999988775543
No 2
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.86 E-value=7.4e-22 Score=187.62 Aligned_cols=133 Identities=17% Similarity=0.132 Sum_probs=114.9
Q ss_pred cCcchhhhcchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCC-CCCCCceEecCCCCCCHHHHHHHHHh
Q 005842 26 VKTDGFELRGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLDDLPGGPEAFELAAKF 104 (674)
Q Consensus 26 s~~~~~~~~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~I~L~d~pgGaeafell~~F 104 (674)
..|.+.....-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .|+...+|.|++++ +++|+.+++|
T Consensus 15 ~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~l~~ 92 (172)
T 3htm_A 15 KVPECRLADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCF 92 (172)
T ss_dssp CCCCCCHHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSC--HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCCcceEEEECCEEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCC--HHHHHHHHHH
Confidence 34544445566788889999999999999999999999999999999999976 67778899999997 8999999999
Q ss_pred HhCceeecccchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhhhcchhhHHHHHhhccchHHHHHhhc
Q 005842 105 CYGIAVDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQ 175 (674)
Q Consensus 105 cYg~~i~it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v~~sw~~~i~~L~sC~~L~~~Ae~l~ 175 (674)
+||+++.++.+|+..|+.+|++|+|++ |.+.|+.||.+.+... +|..++.+|+.++
T Consensus 93 ~Yt~~~~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l~~~---------n~~~~~~~A~~~~ 148 (172)
T 3htm_A 93 IYTGKAPNLDKMADDLLAAADKYALER------LKVMCEDALCSNLSVE---------NAAEILILADLHS 148 (172)
T ss_dssp HHHSCCTTGGGTHHHHHHHHHHTTCHH------HHHHHHHHHHHTCCTT---------THHHHHHHHHHTT
T ss_pred HhCCCCCCcHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhCCHH---------HHHHHHHHHHHhC
Confidence 999999999999999999999999996 8999999999987543 4555555555554
No 3
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.84 E-value=1.9e-21 Score=172.21 Aligned_cols=103 Identities=22% Similarity=0.332 Sum_probs=92.9
Q ss_pred hhhcCCCeeEEEEECC----EEEEecCccccccCHHHHHhhcCC-CCCCCceEecCCCCCCHHHHHHHHHhHhCceeecc
Q 005842 39 YVATDIPSDFLVQIGD----VNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLT 113 (674)
Q Consensus 39 ~r~~~~lcDV~v~V~~----~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~I~L~d~pgGaeafell~~FcYg~~i~it 113 (674)
++.++.+|||+|.|++ +.|++||.+|+++|+||++||... .|+. ..|.|++++ +++|+.+++|+||+++.++
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~--~~~f~~~l~~iYt~~~~~~ 78 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVE--PAAFLILLKYMYSDEIDLE 78 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSC--HHHHHHHHHHHHHCCCCCC
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCC--HHHHHHHHHHHcCCCccCC
Confidence 5778999999999998 999999999999999999999976 5656 899999987 8999999999999999999
Q ss_pred cchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhh
Q 005842 114 ASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVV 150 (674)
Q Consensus 114 ~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v 150 (674)
.+||..|+.+|++++|++ |.+.|++||.+.+
T Consensus 79 ~~~~~~ll~~A~~~~~~~------L~~~c~~~l~~~l 109 (109)
T 2vkp_A 79 ADTVLATLYAAKKYIVPA------LAKACVNFLETSL 109 (109)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHhhC
Confidence 999999999999999996 9999999998764
No 4
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.84 E-value=2.4e-21 Score=175.00 Aligned_cols=105 Identities=18% Similarity=0.262 Sum_probs=95.3
Q ss_pred chhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCC-CCCCCceEecCCCCCCHHHHHHHHHhHhCceeecc
Q 005842 35 GQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLT 113 (674)
Q Consensus 35 ~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~I~L~d~pgGaeafell~~FcYg~~i~it 113 (674)
.-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .|+....|.|++++ +++|+.+++|+||+++.++
T Consensus 15 ~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~ll~~~Yt~~~~~~ 92 (120)
T 2if5_A 15 GLNEQRTQGLLCDVVILVEGREFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVS--AEALTALMDFAYTATLTVS 92 (120)
T ss_dssp HHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSC--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHhcCCCCCeEEEECCEEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCC--HHHHHHHHHHHcCCCCccC
Confidence 45568889999999999999999999999999999999999976 66777899999987 8999999999999999999
Q ss_pred cchHhhHHHhhhhcccccccccCcHHHHHHHHHH
Q 005842 114 ASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLS 147 (674)
Q Consensus 114 ~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~ 147 (674)
.+|+..|+.||++|+|++ |++.|++||+
T Consensus 93 ~~~~~~ll~~A~~~~i~~------L~~~C~~~L~ 120 (120)
T 2if5_A 93 TANVGDILSAARLLEIPA------VSHVCADLLD 120 (120)
T ss_dssp GGGHHHHHHHHHHTTCHH------HHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHhC
Confidence 999999999999999997 8999999984
No 5
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.84 E-value=5.4e-21 Score=194.02 Aligned_cols=125 Identities=17% Similarity=0.178 Sum_probs=101.8
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCC-C--CCCCceEecCCCCCCHHHHHHHHHhHhCcee
Q 005842 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-R--DSELNKIVLDDLPGGPEAFELAAKFCYGIAV 110 (674)
Q Consensus 34 ~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~--e~~~~~I~L~d~pgGaeafell~~FcYg~~i 110 (674)
++-+.++.++.+|||+|.|||+.|++||.+|+++|+||++||+.. . |+...+|.|++++ +++|+.+++|+|||++
T Consensus 20 ~~l~~l~~~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~--~~~f~~ll~~~Yt~~~ 97 (256)
T 3hve_A 20 RALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQI 97 (256)
T ss_dssp HHHHTCCC--CCCCEEEEETTEEEEECHHHHHTTCHHHHHTC-----------CEEECSSCC--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEeCCCC--HHHHHHHHhhccCCCC
Confidence 345678999999999999999999999999999999999999875 3 5677899999997 8999999999999999
Q ss_pred ecccchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhhhcchhhHHHHHhhccchHHHHHhhc
Q 005842 111 DLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQ 175 (674)
Q Consensus 111 ~it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v~~sw~~~i~~L~sC~~L~~~Ae~l~ 175 (674)
.++.+||..|+.||++|||++ |++.|+.||.+.+.++ +|-.++.+|+.++
T Consensus 98 ~i~~~~v~~ll~~A~~l~i~~------l~~~c~~~L~~~l~~~---------n~~~i~~~A~~~~ 147 (256)
T 3hve_A 98 RLNEDTIQDVVQAADLLLLTD------LKTLCCEFLEGCIAAE---------NCIGIRDFALHYC 147 (256)
T ss_dssp CCC-CCHHHHHHHHHHHTCHH------HHHHHHHHHHHTCCSS---------TTHHHHHHHHHTT
T ss_pred cccHhHHHHHHHHHHHHChHH------HHHHHHHHHHhhCCHh---------hHHHHHHHHHHcC
Confidence 999999999999999999997 8999999999998654 4444555555554
No 6
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.83 E-value=3.8e-21 Score=172.87 Aligned_cols=103 Identities=21% Similarity=0.326 Sum_probs=94.0
Q ss_pred chhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCCCCCCCceEecC--CCCCCHHHHHHHHHhHhCceeec
Q 005842 35 GQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLD--DLPGGPEAFELAAKFCYGIAVDL 112 (674)
Q Consensus 35 ~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~--d~pgGaeafell~~FcYg~~i~i 112 (674)
+-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ....|.|+ +++ +++|+.+++|+||+++.+
T Consensus 12 ~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~---~~~~i~l~~~~~~--~~~f~~ll~~~Yt~~~~~ 86 (116)
T 2vpk_A 12 RLNKQREAGFLCDCTIVIGEFQFKAHRNVLASFSEYFGAIYRST---SENNVFLDQSQVK--ADGFQKLLEFIYTGTLNL 86 (116)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTC---CCSCEECCTTTCC--HHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHhcCCCCcEEEEECCEEEeccHHHHhhcCHHHHHHHcCC---CCCeEEeecCCCC--HHHHHHHHHHHcCCCccc
Confidence 45678899999999999999999999999999999999999875 24567777 887 899999999999999999
Q ss_pred ccchHhhHHHhhhhcccccccccCcHHHHHHHHHHH
Q 005842 113 TASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSY 148 (674)
Q Consensus 113 t~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~ 148 (674)
+.+||..|+.||++|+|++ |++.|++||.+
T Consensus 87 ~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~ 116 (116)
T 2vpk_A 87 DSWNVKEIHQAADYLKVEE------VVTKCKIKMED 116 (116)
T ss_dssp CTTTHHHHHHHHHHTTCHH------HHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHhCCHH------HHHHHHHHHhC
Confidence 9999999999999999996 99999999863
No 7
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.83 E-value=4.8e-21 Score=174.86 Aligned_cols=106 Identities=24% Similarity=0.415 Sum_probs=98.3
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCC-CCCCCceEec-CCCCCCHHHHHHHHHhHhCceee
Q 005842 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVL-DDLPGGPEAFELAAKFCYGIAVD 111 (674)
Q Consensus 34 ~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~I~L-~d~pgGaeafell~~FcYg~~i~ 111 (674)
+.-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .| ....|.| ++++ +++|+.+++|+||+++.
T Consensus 18 ~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~~~i~l~~~~~--~~~f~~ll~~~Ytg~~~ 94 (127)
T 1r29_A 18 LNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKR-NLSVINLDPEIN--PEGFNILLDFMYTSRLN 94 (127)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTSTTTT-TCSEEECCTTSC--HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHhcCCCCCEEEEECCEEEehHHHHHHHhCHHHHHHhcCCccC-CCCEEEeCCCCC--HHHHHHHHHHHcCCCcC
Confidence 345678889999999999999999999999999999999999976 55 6789999 8987 89999999999999999
Q ss_pred cccchHhhHHHhhhhcccccccccCcHHHHHHHHHHH
Q 005842 112 LTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSY 148 (674)
Q Consensus 112 it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~ 148 (674)
++.+||..|+.||++|+|++ |++.|+.||.+
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~ 125 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEH------VVDTCRKFIKA 125 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHh
Confidence 99999999999999999996 89999999976
No 8
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.83 E-value=1.8e-21 Score=176.37 Aligned_cols=104 Identities=21% Similarity=0.149 Sum_probs=94.4
Q ss_pred chhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHhHhCceeeccc
Q 005842 35 GQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA 114 (674)
Q Consensus 35 ~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~d~pgGaeafell~~FcYg~~i~it~ 114 (674)
+-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.... ..+|.|++++ +++|+.+++|+|||++.++.
T Consensus 14 ~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~---~~~i~l~~~~--~~~f~~ll~~iYtg~~~~~~ 88 (119)
T 3b84_A 14 ELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQSLYGDGS---GGSVVLPAGF--AEIFGLLLDFFYTGHLALTS 88 (119)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTTT---CCCEEECGGG--HHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHHHhcCCCcceEEEECCEEEEeeHHHHhhcCHHHHHHHCCCC---CCeEEeCCCC--HHHHHHHHHHHcCCCCccCH
Confidence 456788999999999999999999999999999999999998753 5689999987 79999999999999999999
Q ss_pred chHhhHHHhhhhcccccccccCcHHHHHHHHHHHh
Q 005842 115 SNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYV 149 (674)
Q Consensus 115 ~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~ 149 (674)
+||..|+.||++|+|++ |++.|++||.+.
T Consensus 89 ~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~ 117 (119)
T 3b84_A 89 GNRDQVLLAARELRVPE------AVELCQSFKPKT 117 (119)
T ss_dssp TTHHHHHHHHHHTTCHH------HHHHHHHCC---
T ss_pred HHHHHHHHHHHHhCcHH------HHHHHHHHHHHc
Confidence 99999999999999996 899999999764
No 9
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.83 E-value=5.4e-21 Score=173.54 Aligned_cols=104 Identities=21% Similarity=0.282 Sum_probs=96.5
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHhHhCceeecc
Q 005842 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLT 113 (674)
Q Consensus 34 ~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~d~pgGaeafell~~FcYg~~i~it 113 (674)
+.-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ..+|.|++++ +++|+.+++|+||+++.++
T Consensus 17 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~~~ 90 (121)
T 1buo_A 17 CKANQMRLAGTLCDVVIMVDSQEFHAHRTVLACTSKMFEILFHRN----SQHYTLDFLS--PKTFQQILEYAYTATLQAK 90 (121)
T ss_dssp HHHHHHHHHTTTCCEEEEESSCEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHhcCCCCCEEEEECCEEEehhHHHHhhcCHHHHHHHcCC----CcEEEeCCCC--HHHHHHHHHhhcCCCcCCC
Confidence 345678889999999999999999999999999999999999763 4689999998 8999999999999999999
Q ss_pred cchHhhHHHhhhhcccccccccCcHHHHHHHHHHHh
Q 005842 114 ASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYV 149 (674)
Q Consensus 114 ~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~ 149 (674)
.+|+..|+.||++|+|++ |.+.|++||.+.
T Consensus 91 ~~~~~~ll~~A~~~~i~~------L~~~c~~~l~~~ 120 (121)
T 1buo_A 91 AEDLDDLLYAAEILEIEY------LEEQCLKMLETI 120 (121)
T ss_dssp GGGHHHHHHHHHHHTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHH------HHHHHHHHHHHh
Confidence 999999999999999996 899999999875
No 10
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.83 E-value=1.5e-21 Score=180.53 Aligned_cols=128 Identities=17% Similarity=0.153 Sum_probs=97.6
Q ss_pred hhcchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCC-CCCCCceEecCCCCCCHHHHHHHHHhHhCcee
Q 005842 32 ELRGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLDDLPGGPEAFELAAKFCYGIAV 110 (674)
Q Consensus 32 ~~~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~I~L~d~pgGaeafell~~FcYg~~i 110 (674)
....-..++.++.+|||+|.|+|+.|++||.+|+++|+||++||... .|+....|.|++++ +++|+.+++|+||+++
T Consensus 12 l~~~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~~~~~l~~~Y~~~~ 89 (145)
T 4eoz_A 12 LADELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKA 89 (145)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSC--HHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHhCCCCcceEEEECCEEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCC--HHHHHHHHHhhccCcc
Confidence 34455678889999999999999999999999999999999999876 55667899999987 8999999999999999
Q ss_pred ecccchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhhhcchhhHHHHHhhccchHHHHHhhch
Q 005842 111 DLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQI 176 (674)
Q Consensus 111 ~it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v~~sw~~~i~~L~sC~~L~~~Ae~l~i 176 (674)
.++.+|+..|+.+|++++|++ |.+.|+.||.+.+.. .+|..++.+|+.+++
T Consensus 90 ~~~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~l~~---------~n~~~~l~~A~~~~~ 140 (145)
T 4eoz_A 90 PNLDKMADDLLAAADKYALER------LKVMCEDALCSNLSV---------ENAAEILILADLHSA 140 (145)
T ss_dssp TTGGGTHHHHHHHHHHTTCHH------HHHHHHCC-------------------------------
T ss_pred CCcHHHHHHHHHHHHHhCHHH------HHHHHHHHHHHhCCH---------HHHHHHHHHHHHhCH
Confidence 999999999999999999996 899999999998743 477777777777664
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.83 E-value=2.3e-21 Score=179.76 Aligned_cols=107 Identities=21% Similarity=0.169 Sum_probs=93.8
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHhHhCceeecc
Q 005842 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLT 113 (674)
Q Consensus 34 ~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~d~pgGaeafell~~FcYg~~i~it 113 (674)
+.-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.... ..+|.|++++ +++|+.+++|+||+++.++
T Consensus 14 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~---~~~i~l~~~~--~~~f~~lL~fiYtg~~~i~ 88 (135)
T 2yy9_A 14 QELNKQREKGQYCDATLDVGGLVFKAHWSVLACCSHFFQRIYGDGT---GGSVVLPAGF--AEIFGLLLDFFYTGHLALT 88 (135)
T ss_dssp HHHHHHHHTTTTCCEEEEETTEEEEECHHHHHHHCHHHHHTCC-------CCEEECGGG--HHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEehHHHHHHHhCHHHHHHHcCCC---CCeEEeCCCC--HHHHHHHHHHHhCCCCCCC
Confidence 3456789999999999999999999999999999999999998643 5679999987 7999999999999999999
Q ss_pred cchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhhh
Q 005842 114 ASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVL 151 (674)
Q Consensus 114 ~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v~ 151 (674)
.+||..|+.||++|+|++ |++.|++||.+.+.
T Consensus 89 ~~~v~~ll~~A~~l~i~~------L~~~C~~~l~~~l~ 120 (135)
T 2yy9_A 89 SGNRDQVLLAAKELRVPE------AVELCQSFQPQTSV 120 (135)
T ss_dssp TTTHHHHHHHHHHTTCHH------HHHHHHHCCC----
T ss_pred HHHHHHHHHHHHHhCcHH------HHHHHHHHHHHhcc
Confidence 999999999999999996 89999999998764
No 12
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.82 E-value=7.9e-21 Score=176.43 Aligned_cols=112 Identities=21% Similarity=0.262 Sum_probs=99.9
Q ss_pred hcchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCCCCCCCceEecC-CCCCCHHHHHHHHHhHhCceee
Q 005842 33 LRGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLD-DLPGGPEAFELAAKFCYGIAVD 111 (674)
Q Consensus 33 ~~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~-d~pgGaeafell~~FcYg~~i~ 111 (674)
.+.-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||..... +...|.|+ +++ +++|+.+++|+||+++.
T Consensus 24 ~~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~-e~~~i~l~~~v~--~~~~~~lL~~~Ytg~~~ 100 (138)
T 2z8h_A 24 LLSLNDQRKKDVLCDVTVLVEGQRFRAHRSVLAACSSYFHSRIVGQTD-AELTVTLPEEVT--VKGFEPLIQFAYTAKLI 100 (138)
T ss_dssp HHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHTTCCC-TTEEEECCTTSC--HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHhhCCCcCeEEEECCEEEechHHHHHHcCHHHHHHHhcCCC-CCceEEeCCCCC--HHHHHHHHHHhcCCCcc
Confidence 345667889999999999999999999999999999999999987521 23578884 887 89999999999999999
Q ss_pred cccchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhhhcc
Q 005842 112 LTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSS 153 (674)
Q Consensus 112 it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v~~s 153 (674)
++.+||..|+.||++|+|++ |++.|++||.+.+..+
T Consensus 101 i~~~~v~~ll~~A~~~~i~~------L~~~C~~~l~~~l~~s 136 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHN------IEESCFQFLKFKFLDS 136 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGG------GHHHHHHHTTCCCSCC
T ss_pred cCHHHHHHHHHHHHHhCCHH------HHHHHHHHHHHhcccc
Confidence 99999999999999999997 8999999999887543
No 13
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.82 E-value=4.3e-21 Score=176.08 Aligned_cols=104 Identities=20% Similarity=0.286 Sum_probs=89.2
Q ss_pred chhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCCCCCCCceEecC-CCCCCHHHHHHHHHhHhCceeecc
Q 005842 35 GQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLD-DLPGGPEAFELAAKFCYGIAVDLT 113 (674)
Q Consensus 35 ~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~-d~pgGaeafell~~FcYg~~i~it 113 (674)
.-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ...+|.|+ +++ +++|+.+++|+||+++.++
T Consensus 23 ~l~~l~~~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~~f~~~---~~~~i~l~~~~~--~~~f~~ll~~iYtg~~~i~ 97 (129)
T 3ga1_A 23 CLNEQRLQGLYCDVSVVVKGHAFKAHRAVLAASSSYFRDLFNNS---RSAVVELPAAVQ--PQSFQQILSFCYTGRLSMN 97 (129)
T ss_dssp HHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHHHC---CCSEEECCTTCC--HHHHHHHHHHHHHSEEECC
T ss_pred HHHHHHhcCCCcceEEEECCEEEEehHHHHHHcCHHHHHHHcCC---CCCEEEECCCCC--HHHHHHHHHHHhCCccccC
Confidence 45678889999999999999999999999999999999999865 56789996 887 8999999999999999999
Q ss_pred cchHhhHHHhhhhcccccccccCcHHHHHHHHHHHh
Q 005842 114 ASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYV 149 (674)
Q Consensus 114 ~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~ 149 (674)
.+||..|+.||++|||++ |++.|++||.+.
T Consensus 98 ~~~~~~ll~~A~~~~i~~------l~~~C~~~L~~~ 127 (129)
T 3ga1_A 98 VGDQDLLMYTAGFLQIQE------IMEKGTEFFLKV 127 (129)
T ss_dssp TTTHHHHHHHHHHTTBTT------SSCC--------
T ss_pred HHHHHHHHHHHHHhCCHH------HHHHHHHHHHHh
Confidence 999999999999999997 778999999875
No 14
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.82 E-value=6e-21 Score=172.96 Aligned_cols=101 Identities=20% Similarity=0.261 Sum_probs=93.3
Q ss_pred chhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHhHhCceeeccc
Q 005842 35 GQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA 114 (674)
Q Consensus 35 ~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~d~pgGaeafell~~FcYg~~i~it~ 114 (674)
.-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.+. ...|.|++++ +++|+.+++|+||+++.++.
T Consensus 17 ~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~~f~~~----~~~i~l~~~~--~~~f~~ll~~~Ytg~~~i~~ 90 (119)
T 2q81_A 17 QLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQ----KDVVHLDISN--AAGLGQVLEFMYTAKLSLSP 90 (119)
T ss_dssp HHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHC----CSGGGGGGCC--HHHHHHHHHHHHHSCCCCCT
T ss_pred HHHHHHhcCCCcceEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHHHcCCCCccCH
Confidence 45678899999999999999999999999999999999999863 3568888886 79999999999999999999
Q ss_pred chHhhHHHhhhhcccccccccCcHHHHHHHHHH
Q 005842 115 SNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLS 147 (674)
Q Consensus 115 ~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~ 147 (674)
+||..|+.||++|+|++ |++.|++||.
T Consensus 91 ~~~~~ll~~A~~l~i~~------L~~~C~~~l~ 117 (119)
T 2q81_A 91 ENVDDVLAVATFLQMQD------IITACHALKS 117 (119)
T ss_dssp TTHHHHHHHHHHTTCHH------HHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCHH------HHHHHHHHHh
Confidence 99999999999999997 8999999985
No 15
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.82 E-value=7.8e-21 Score=178.43 Aligned_cols=106 Identities=18% Similarity=0.173 Sum_probs=93.5
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCC-C--CCCCceEecCCCCCCHHHHHHHHHhHhCcee
Q 005842 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-R--DSELNKIVLDDLPGGPEAFELAAKFCYGIAV 110 (674)
Q Consensus 34 ~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~--e~~~~~I~L~d~pgGaeafell~~FcYg~~i 110 (674)
+.-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... . ++...+|.|++++ +++|+.+++|+||+++
T Consensus 36 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~--~~~f~~lL~fiYtg~~ 113 (144)
T 2ppi_A 36 RALSSFREESRFCDAHLVLDGEEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELEGIS--VMVMREILDYIFSGQI 113 (144)
T ss_dssp HHHHHTTC--CCCCEEEEETTEEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECCSSC--HHHHHHHHHHHTTSCC
T ss_pred HHHHHHHhcCCCcceEEEECCEEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeCCCC--HHHHHHHHHHHhCCCC
Confidence 345678889999999999999999999999999999999999864 3 3567899999998 8999999999999999
Q ss_pred ecccchHhhHHHhhhhcccccccccCcHHHHHHHHHH
Q 005842 111 DLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLS 147 (674)
Q Consensus 111 ~it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~ 147 (674)
.++.+||..|+.||++|+|++ |++.|++||.
T Consensus 114 ~i~~~~v~~ll~~A~~l~i~~------L~~~C~~~L~ 144 (144)
T 2ppi_A 114 RLNEDTIQDVVQAADLLLLTD------LKTLCCEFLE 144 (144)
T ss_dssp CCCTTTHHHHHHHHHHTTCHH------HHHHHHTTC-
T ss_pred CCCHHHHHHHHHHHHHhCcHH------HHHHHHHHhC
Confidence 999999999999999999996 8999999974
No 16
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.81 E-value=5.1e-21 Score=174.21 Aligned_cols=104 Identities=21% Similarity=0.224 Sum_probs=93.6
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCCCCCCCceEecCC-CCCCHHHHHHHHHhHhCceeec
Q 005842 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDD-LPGGPEAFELAAKFCYGIAVDL 112 (674)
Q Consensus 34 ~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~d-~pgGaeafell~~FcYg~~i~i 112 (674)
++-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||..... +...|.|++ ++ +++|+.+++|+||+++.+
T Consensus 21 ~~l~~l~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~~f~~~~~-e~~~i~l~~~~~--~~~f~~~l~~iYtg~~~~ 97 (125)
T 3ohu_A 21 LGLNDQRKKDILCDVTLIVERKEFRAHRAVLAACSEYFWQALVGQTK-NDLVVSLPEEVT--ARGFGPLLQFAYTAKLLL 97 (125)
T ss_dssp HHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTCCC-SSCEEECCTTCC--HHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHhcCCccceEEEECCEEEechHHHHHHcCHHHHHHhcCCCC-CCcEEEeCCCCC--HHHHHHHHHhHcCCceEE
Confidence 34567889999999999999999999999999999999999987632 267899988 87 899999999999999999
Q ss_pred ccchHhhHHHhhhhcccccccccCcHHHHHHHHH
Q 005842 113 TASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFL 146 (674)
Q Consensus 113 t~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL 146 (674)
+.+||..|+.||++|+|++ |++.|++||
T Consensus 98 ~~~~v~~ll~~A~~l~i~~------L~~~C~~~L 125 (125)
T 3ohu_A 98 SRENIREVIRCAEFLRMHN------LEDSCFSFL 125 (125)
T ss_dssp CTTTHHHHHHHHHHHTBSS------CTTSSCCCC
T ss_pred CHHHHHHHHHHHHHhCCHH------HHHHHHHhC
Confidence 9999999999999999997 677888775
No 17
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.80 E-value=2.2e-20 Score=170.50 Aligned_cols=95 Identities=21% Similarity=0.228 Sum_probs=86.1
Q ss_pred hhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHhHhCceeecccchHh
Q 005842 39 YVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTASNIS 118 (674)
Q Consensus 39 ~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~d~pgGaeafell~~FcYg~~i~it~~NV~ 118 (674)
.|.++.+|||+|.|+|+.|++||.+|+++|+||++ ....|+|++++ +++|+.+++|+|||++.|+.+||.
T Consensus 24 ~r~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------~~~~i~l~~v~--~~~f~~ll~fiYtg~~~i~~~~v~ 93 (119)
T 3m5b_A 24 ARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGR--------RGQWALGEGIS--PSTFAQLLNFVYGESVELQPGELR 93 (119)
T ss_dssp HHHTTTTCCEEEEETTEEEEECHHHHHTTCGGGCC--------CEEEECCSSCC--HHHHHHHHHHHTTCCEEECGGGHH
T ss_pred HHhcCCCcceEEEECCEEEeeEHHHHHHcCHHHhc--------CCCEEEeCCCC--HHHHHHHHHHHcCCCcCcCHHHHH
Confidence 46789999999999999999999999999999985 24679999998 899999999999999999999999
Q ss_pred hHHHhhhhcccccccccCcHHHHHHHHHHHh
Q 005842 119 GLRCAAEYLEMTEDLEEGNLIFKTEAFLSYV 149 (674)
Q Consensus 119 ~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~ 149 (674)
.|+.||++|||++ |++.|++++.+.
T Consensus 94 ~ll~aA~~l~i~~------l~~~C~~~~~~~ 118 (119)
T 3m5b_A 94 PLQEAARALGVQS------LEEACWRARGDR 118 (119)
T ss_dssp HHHHHHHHTTCHH------HHHHHHHHC---
T ss_pred HHHHHHHHhCCHH------HHHHHHHHHhhc
Confidence 9999999999996 899999998763
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.80 E-value=1.1e-20 Score=172.34 Aligned_cols=107 Identities=19% Similarity=0.229 Sum_probs=93.9
Q ss_pred hhcchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCCCCCCCceEec-CCCCCCHHHHHHHHHhHhCcee
Q 005842 32 ELRGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVL-DDLPGGPEAFELAAKFCYGIAV 110 (674)
Q Consensus 32 ~~~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L-~d~pgGaeafell~~FcYg~~i 110 (674)
..+.-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||.... .+...|.| .+++ +++|+.+++|+||+++
T Consensus 16 l~~~l~~l~~~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~mf~~~~-~e~~~i~l~~~v~--~~~f~~lL~~iYtg~~ 92 (124)
T 2ihc_A 16 VLLSLNDQRKKDVLCDVTIFVEGQRFRAHRSVLAACSSYFHSRIVGQA-DGELNITLPEEVT--VKGFEPLIQFAYTAKL 92 (124)
T ss_dssp HHHHHHHHHHHTCSCCEEEEETTEEEEECHHHHHHHBHHHHHHHTTC----CEEEECCTTSC--HHHHHHHHHHHHHSEE
T ss_pred HHHHHHHHHhcCCCcCEEEEECCEEEecHHHHHHHcCHHHHHHHcCCC-CCCceEeecCCcC--HHHHHHHHHHhcCCCc
Confidence 344567789999999999999999999999999999999999998752 12357888 4887 8999999999999999
Q ss_pred ecccchHhhHHHhhhhcccccccccCcHHHHHHHHHH
Q 005842 111 DLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLS 147 (674)
Q Consensus 111 ~it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~ 147 (674)
.++.+||..|+.||++|+|++ |++.|++||.
T Consensus 93 ~i~~~~v~~ll~~A~~~~~~~------L~~~C~~~l~ 123 (124)
T 2ihc_A 93 ILSKENVDEVCKCVEFLSVHN------IEESCFQFLK 123 (124)
T ss_dssp EEETTTHHHHHHHHHHHTBSS------CCGGGGGTC-
T ss_pred ccCHHHHHHHHHHHHHHCCHH------HHHHHHHHHh
Confidence 999999999999999999997 7789999875
No 19
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.76 E-value=6.4e-19 Score=183.46 Aligned_cols=136 Identities=17% Similarity=0.179 Sum_probs=112.3
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCC-CCCCCceEecCCCCCCHHHHHHHHHhHhCceeec
Q 005842 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-RDSELNKIVLDDLPGGPEAFELAAKFCYGIAVDL 112 (674)
Q Consensus 34 ~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~e~~~~~I~L~d~pgGaeafell~~FcYg~~i~i 112 (674)
+.-..++.++.+|||+|.|+|++|++||.+||++|+||++||... .|+...+|.|++++ +++|+.+++|+||+.+.+
T Consensus 163 ~~l~~l~~~~~~~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~--~~~f~~~L~~iYt~~~~~ 240 (312)
T 3hqi_A 163 DELGGLWENSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVE--PEVFKEMMCFIYTGKAPN 240 (312)
T ss_dssp HHHHHHHHTTCSCCEEEEETTEEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSC--HHHHHHHHHHHHHSCCTT
T ss_pred HHHHHHHhCCCCCceEEEECCEEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCC--HHHHHHHHHhhcCCCCCC
Confidence 334567788999999999999999999999999999999999876 67778899999997 899999999999999999
Q ss_pred ccchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhhhcchhhHHHHHhhccchHHHHHhhc---hhhHHHHHHHH
Q 005842 113 TASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIIVLKSCEKLSPWAENLQ---IVRRCSESIAW 186 (674)
Q Consensus 113 t~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v~~sw~~~i~~L~sC~~L~~~Ae~l~---iv~rcidsiA~ 186 (674)
+.+||..|+.||++++|+. |+..|+.||.+.+.. .+|..++.+|+.++ +.+.|++-|+.
T Consensus 241 ~~~~~~~ll~~A~~~~~~~------l~~~c~~~l~~~~~~---------~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 302 (312)
T 3hqi_A 241 LDKMADDLLAAADKYALER------LKVMCEDALCSNLSV---------ENAAEILILADLHSADQLKTQAVDFINY 302 (312)
T ss_dssp HHHHHHHHHHHHHHTTCHH------HHHHHHHHHHTTCCT---------TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCHHH------HHHHHHHHHHccCCH---------HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999999996 899999999988743 35555556666653 44555555543
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.74 E-value=1.6e-18 Score=156.81 Aligned_cols=92 Identities=16% Similarity=0.164 Sum_probs=85.2
Q ss_pred cchhhhhhcCCCeeEEEEECCEEEEecCccccccCHHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHhHhCcee-ec
Q 005842 34 RGQSWYVATDIPSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIAV-DL 112 (674)
Q Consensus 34 ~~~~~~r~~~~lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~d~pgGaeafell~~FcYg~~i-~i 112 (674)
+.-+.++.++.+|||+|.|+|+.|++||.+|+++|+||++||... ...|.|++++ +++|+.+++|+|||++ .+
T Consensus 20 ~~l~~~~~~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~~f~~~----~~~i~l~~~~--~~~f~~~l~~~Ytg~~~~~ 93 (116)
T 3fkc_A 20 NSLNEQRGHGLFCDVTVIVEDRKFRAHKNILSASSTYFHQLFSVA----GQVVELSFIR--AEIFAEILNYIYSSKIVRV 93 (116)
T ss_dssp HHHHHHHHHTTTCCEEEEETTEEEEECHHHHHHHCHHHHHHTTSC----CSEEEECSSC--HHHHHHHHHHHTTSCCCSC
T ss_pred HHHHHHHhcCCceeEEEEECCEEEehhHHHHHHcCHHHHHHHcCC----CCEEEeCCCC--HHHHHHHHHhhcCCCcCCC
Confidence 345678889999999999999999999999999999999999864 4689999998 8999999999999999 79
Q ss_pred ccchHhhHHHhhhhccccc
Q 005842 113 TASNISGLRCAAEYLEMTE 131 (674)
Q Consensus 113 t~~NV~~LlcAA~~LqMte 131 (674)
+.+||..|+.||++|||+.
T Consensus 94 ~~~~~~~ll~~A~~l~i~~ 112 (116)
T 3fkc_A 94 RSDLLDELIKSGQLLGVKF 112 (116)
T ss_dssp CHHHHHHHHHHHHHHTCHH
T ss_pred CHHHHHHHHHHHHHhCccc
Confidence 9999999999999999985
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.38 E-value=3.7e-13 Score=128.79 Aligned_cols=95 Identities=13% Similarity=0.203 Sum_probs=82.6
Q ss_pred EEEEE-CCEEEEecCccccccCHHHHHhhcC-C-C-CCCCceEecCCCCCCHHHHHHHHHhHhCce--------------
Q 005842 48 FLVQI-GDVNFHLHKYPLLSRSGKMNRLIYE-S-R-DSELNKIVLDDLPGGPEAFELAAKFCYGIA-------------- 109 (674)
Q Consensus 48 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~-~-~-e~~~~~I~L~d~pgGaeafell~~FcYg~~-------------- 109 (674)
|+|+. +|+.|.+|+.+ |++|+||+.||.. + . |+....|.|++|+ +.+++.|++|||+..
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~--~~iL~kViey~~~h~~~~~~~~~~~~~~~ 79 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEK 79 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSC--HHHHHHHHHHHHHTTTCCC----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCcc--HHHHHHHHHHHHHcCcCCCCccccccccc
Confidence 77765 79999999998 9999999999987 3 4 5566789999998 699999999999877
Q ss_pred ------------eecccchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhhh
Q 005842 110 ------------VDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVL 151 (674)
Q Consensus 110 ------------i~it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v~ 151 (674)
+.|+.+|+..|+.||+||+|.. |++.||.|+..++.
T Consensus 80 ~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~------Lld~~c~~va~~i~ 127 (159)
T 2ast_A 80 RTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 127 (159)
T ss_dssp -CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHS
T ss_pred chhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 8899999999999999999996 99999999999884
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.17 E-value=3.3e-11 Score=106.27 Aligned_cols=79 Identities=13% Similarity=0.242 Sum_probs=66.0
Q ss_pred EEEEE-CCEEEEecCccccccCHHHHHhhcCC---CCCCCceEecCCCCCCHHHHHHHHHhHh-----C---ceee---c
Q 005842 48 FLVQI-GDVNFHLHKYPLLSRSGKMNRLIYES---RDSELNKIVLDDLPGGPEAFELAAKFCY-----G---IAVD---L 112 (674)
Q Consensus 48 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~---~e~~~~~I~L~d~pgGaeafell~~FcY-----g---~~i~---i 112 (674)
|+|+- +|+.|.+||.+ |++|+||+.||... .|+....|.|++|+ +.+++.+++||| + +.|. |
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~--~~iL~kViey~~~h~~~~~~~~~i~~~~i 80 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 80 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSC--HHHHHHHHHHHHHHHHHTTCCSCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCC--HHHHHHHHHHHHHhcccCCCcCCCCcCcC
Confidence 55554 68999999999 99999999999862 45567889999998 699999999999 5 6777 9
Q ss_pred ccchHhhHHHhhhhccc
Q 005842 113 TASNISGLRCAAEYLEM 129 (674)
Q Consensus 113 t~~NV~~LlcAA~~LqM 129 (674)
+.+|+..|+.||+||+.
T Consensus 81 ~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 81 APEIALELLMAANFLDC 97 (97)
T ss_dssp CGGGHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhhhCC
Confidence 99999999999999973
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.07 E-value=1.6e-10 Score=108.64 Aligned_cols=92 Identities=13% Similarity=0.201 Sum_probs=81.7
Q ss_pred EEEEE-CCEEEEecCccccccCHHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHhHhCce-----------------
Q 005842 48 FLVQI-GDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIA----------------- 109 (674)
Q Consensus 48 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~d~pgGaeafell~~FcYg~~----------------- 109 (674)
|+|+. +|+.|.+|+.+ |..|+||+.||.... ...|.|++|+ +.+++.|++|||...
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG---MDPVPLPNVN--AAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC---CSSEECTTCC--HHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC---CCceecCCcC--HHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 67776 68999999998 899999999998632 4579999998 699999999999755
Q ss_pred ---------eecccchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhhh
Q 005842 110 ---------VDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVL 151 (674)
Q Consensus 110 ---------i~it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v~ 151 (674)
+.++.+++..|+.||+||+|.. |++.||.|+..++-
T Consensus 78 ~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 78 DIPVWDQEFLKVDQGTLFELILAANYLDIKG------LLDVTCKTVANMIK 122 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCHH------HHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHc
Confidence 7889999999999999999996 99999999999873
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.91 E-value=2e-10 Score=110.16 Aligned_cols=93 Identities=13% Similarity=0.221 Sum_probs=51.8
Q ss_pred EEEEE-CCEEEEecCccccccCHHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHhHhCce-----------------
Q 005842 48 FLVQI-GDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIA----------------- 109 (674)
Q Consensus 48 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~d~pgGaeafell~~FcYg~~----------------- 109 (674)
|+|+. +|+.|.+|+.+ |..|+||+.||.... ....|.|++|+ +.+++.|++|||...
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~--~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC--VDNGVPLPNVT--SKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC--------------CCTTSC--HHHHHHHHHC----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC--CCCceeCCcCc--HHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 66664 79999999998 899999999998642 23479999998 699999999999865
Q ss_pred ----------eecccchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhhh
Q 005842 110 ----------VDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVL 151 (674)
Q Consensus 110 ----------i~it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v~ 151 (674)
+.++..++..|+.||+||+|.. |++.||.|+..++-
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~------Lldl~c~~vA~~ik 126 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIKN------LLDLTCQTVADMIK 126 (160)
T ss_dssp --------------------CHHHHHHTTCHH------HHHHHHHHHHHTTT
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH------HHHHHHHHHHHHHc
Confidence 5789999999999999999996 99999999999873
No 25
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.36 E-value=5.1e-07 Score=79.97 Aligned_cols=79 Identities=15% Similarity=0.183 Sum_probs=67.0
Q ss_pred EEEEE-CCEEEEecCccccccCHHHHHhhcCCCCCCCceEecCCCCCCHHHHHHHHHhHhCce--------------eec
Q 005842 48 FLVQI-GDVNFHLHKYPLLSRSGKMNRLIYESRDSELNKIVLDDLPGGPEAFELAAKFCYGIA--------------VDL 112 (674)
Q Consensus 48 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e~~~~~I~L~d~pgGaeafell~~FcYg~~--------------i~i 112 (674)
|+|+- +|+.|.+|+.+ |..|++|+.|+..+-+.....|.|++|+ +.+++.|++|||.-. ..+
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~--~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~v 82 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFD--SHILEKAVEYLNYNLKYSGVSEDDDEIPEFEI 82 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSC--HHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCC
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcC--HHHHHHHHHHHHHhcccCCCccccccCCCccC
Confidence 67776 78999999996 8999999999986433444689999998 699999999999532 467
Q ss_pred ccchHhhHHHhhhhccc
Q 005842 113 TASNISGLRCAAEYLEM 129 (674)
Q Consensus 113 t~~NV~~LlcAA~~LqM 129 (674)
..+++..|+.||+||++
T Consensus 83 d~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 83 PTEMSLELLLAADYLSI 99 (99)
T ss_dssp CHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 88999999999999985
No 26
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.32 E-value=5.3e-07 Score=79.39 Aligned_cols=79 Identities=13% Similarity=0.211 Sum_probs=64.7
Q ss_pred EEEEE-CCEEEEecCccccccCHHHHHhhcCC---CCCCCceEecCCCCCCHHHHHHHHHhHhCce-----------eec
Q 005842 48 FLVQI-GDVNFHLHKYPLLSRSGKMNRLIYES---RDSELNKIVLDDLPGGPEAFELAAKFCYGIA-----------VDL 112 (674)
Q Consensus 48 V~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~---~e~~~~~I~L~d~pgGaeafell~~FcYg~~-----------i~i 112 (674)
|+|+- +|+.|.+|+.+ |..|++|+.|+... .|.....|.|++|+ +.+++.|++|||.-. ..+
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~--~~iL~kVieyc~~h~~~~~~~~~i~~w~v 79 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFPI 79 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHHSCCSCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCC--HHHHHHHHHHHHHccccCCCcccCCCccc
Confidence 56665 78999999996 89999999999863 34445689999998 699999999999532 468
Q ss_pred ccchHhhHHHhhhhccc
Q 005842 113 TASNISGLRCAAEYLEM 129 (674)
Q Consensus 113 t~~NV~~LlcAA~~LqM 129 (674)
..+++..|+.||+||++
T Consensus 80 d~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 80 APEIALELLMAANFLDC 96 (96)
T ss_dssp CTTTHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 89999999999999985
No 27
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.26 E-value=1.2e-06 Score=84.65 Aligned_cols=95 Identities=11% Similarity=0.149 Sum_probs=77.2
Q ss_pred eEEEEE-CCEEEEecCccccccCHHHHHhhcCCCC-----CCCceEecCCCCCCHHHHHHHHHhHhCce-----------
Q 005842 47 DFLVQI-GDVNFHLHKYPLLSRSGKMNRLIYESRD-----SELNKIVLDDLPGGPEAFELAAKFCYGIA----------- 109 (674)
Q Consensus 47 DV~v~V-~~~~F~lHK~vLas~S~yfr~lf~~~~e-----~~~~~I~L~d~pgGaeafell~~FcYg~~----------- 109 (674)
-|+|+- +|+.|.+++.+ |..|++++.|+..... .....|.|++|+ +.+++.|++|||--+
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVR--SSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCC--HHHHHHHHHHHHHTTTCCCCC-----
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCC--HHHHHHHHHHHHHcccCCCccccccc
Confidence 466665 58999999997 8889999999986421 223689999998 699999999999421
Q ss_pred --------------eecccchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhh
Q 005842 110 --------------VDLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVV 150 (674)
Q Consensus 110 --------------i~it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v 150 (674)
+.+....+..|+.||.||+|.. |++.||.++...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~------Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKP------LLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHH------HHHHHHHHHHHHH
Confidence 4577789999999999999996 9999999998876
No 28
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.72 E-value=2.5e-05 Score=70.78 Aligned_cols=80 Identities=13% Similarity=0.193 Sum_probs=63.9
Q ss_pred eEEEE-ECCEEEEecCccccccCHHHHHhhcCC---CCCCCceEecCCCCCCHHHHHHHHHhHhCce-----------ee
Q 005842 47 DFLVQ-IGDVNFHLHKYPLLSRSGKMNRLIYES---RDSELNKIVLDDLPGGPEAFELAAKFCYGIA-----------VD 111 (674)
Q Consensus 47 DV~v~-V~~~~F~lHK~vLas~S~yfr~lf~~~---~e~~~~~I~L~d~pgGaeafell~~FcYg~~-----------i~ 111 (674)
-|+|+ -+|+.|.+++. .|..|+.++.|+... .|.....|.|++|+ +.+++.|++|||--. ..
T Consensus 18 ~v~L~SsDG~~F~V~~~-~A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~--s~iL~kVieyc~~h~~~~~~~~~i~~w~ 94 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKRE-HALTSGTIKAMLSGPGQFAENETNEVNFREIP--SHVLSKVCMYFTYKVRYTNSSTEIPEFP 94 (112)
T ss_dssp EEEEECTTSCEEEEEHH-HHHTSHHHHHHSSCC--------CEEECSSCC--HHHHHHHHHHHHHHHHHSSCSSCCCCCC
T ss_pred EEEEEcCCCCEEEECHH-HHHHhHHHHHHHHhcCCcccccCCceeCCCCC--HHHHHHHHHHHHHhhhccCCcCCCCCcc
Confidence 36666 47899999999 578999999999863 23344689999998 699999999998432 46
Q ss_pred cccchHhhHHHhhhhccc
Q 005842 112 LTASNISGLRCAAEYLEM 129 (674)
Q Consensus 112 it~~NV~~LlcAA~~LqM 129 (674)
+..+++..|+.||+||++
T Consensus 95 vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 95 IAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCc
Confidence 888999999999999985
No 29
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.29 E-value=0.00055 Score=61.10 Aligned_cols=93 Identities=17% Similarity=0.183 Sum_probs=71.6
Q ss_pred eEEEEECCEEEEecCccccccC-HHHHHhhcCCCC-----CCCceEecCCCCCCHHHHHHHHHhHhCceeeccc-chHhh
Q 005842 47 DFLVQIGDVNFHLHKYPLLSRS-GKMNRLIYESRD-----SELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNISG 119 (674)
Q Consensus 47 DV~v~V~~~~F~lHK~vLas~S-~yfr~lf~~~~e-----~~~~~I~L~d~pgGaeafell~~FcYg~~i~it~-~NV~~ 119 (674)
-|+|.|||+.|...+..|.... .+|.+||....+ ....++-| |- .|+.|+.|++|..+|++.+.. -.+..
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DR--dp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DR--DPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CS--CHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cC--ChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 4788999999999999999886 578999875311 12334554 33 479999999999999988743 34578
Q ss_pred HHHhhhhcccccccccCcHHHHHHHHHHH
Q 005842 120 LRCAAEYLEMTEDLEEGNLIFKTEAFLSY 148 (674)
Q Consensus 120 LlcAA~~LqMte~~~~gNL~~~ce~FL~~ 148 (674)
++..|+|.++++ |++.|++-+.+
T Consensus 84 l~~Ea~fy~l~~------L~~~l~~~i~~ 106 (107)
T 3drz_A 84 VLEEAEFYNITS------LIKLVKDKIRE 106 (107)
T ss_dssp HHHHHHHHTCHH------HHHHHHHHHHH
T ss_pred HHHHHHHCCCHH------HHHHHHHHHhc
Confidence 999999999997 88888775543
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.38 E-value=0.027 Score=55.95 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=71.5
Q ss_pred eEEEEECCEEEEecCccccccC-HHHHHhhcCCCC-----CCCceEecCCCCCCHHHHHHHHHhHhCceeeccc-chHhh
Q 005842 47 DFLVQIGDVNFHLHKYPLLSRS-GKMNRLIYESRD-----SELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNISG 119 (674)
Q Consensus 47 DV~v~V~~~~F~lHK~vLas~S-~yfr~lf~~~~e-----~~~~~I~L~d~pgGaeafell~~FcYg~~i~it~-~NV~~ 119 (674)
=|+|.|||..|...+..|.... .+|.+||....+ ....++-|. - .|..|+.|++|.-+|++.+.. -.+..
T Consensus 13 ~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFID-R--DP~~F~~ILnyLRtG~L~lP~~~~~~~ 89 (202)
T 3drx_A 13 WVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLID-R--DPTYFGPVLNYLRHGKLVINKDLAEEG 89 (202)
T ss_dssp EEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEEC-S--CSTTHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEec-C--ChHHHHHHHHHhcCCccCCCCCCCHHH
Confidence 3678999999999999998875 478899875311 123345542 2 358999999999999988743 34467
Q ss_pred HHHhhhhcccccccccCcHHHHHHHHHHHh
Q 005842 120 LRCAAEYLEMTEDLEEGNLIFKTEAFLSYV 149 (674)
Q Consensus 120 LlcAA~~LqMte~~~~gNL~~~ce~FL~~~ 149 (674)
++.-|+|.++.+ |++.|.+-+.+.
T Consensus 90 l~eEA~FygL~~------Lv~~l~~~i~er 113 (202)
T 3drx_A 90 VLEEAEFYNITS------LIKLVKDKIRER 113 (202)
T ss_dssp HHHHHHHTTCHH------HHHHHHHHHHHH
T ss_pred HHHHHHHCCcHH------HHHHHHHHHHHH
Confidence 999999999986 888888877654
No 31
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=93.94 E-value=0.02 Score=51.86 Aligned_cols=82 Identities=15% Similarity=0.220 Sum_probs=62.2
Q ss_pred EEEEECCEEEEecCccccccCH-HHHHhhcCCC--CCCCceEecCCCCCCHHHHHHHHHhHhCceeeccc-chHhhHHHh
Q 005842 48 FLVQIGDVNFHLHKYPLLSRSG-KMNRLIYESR--DSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNISGLRCA 123 (674)
Q Consensus 48 V~v~V~~~~F~lHK~vLas~S~-yfr~lf~~~~--e~~~~~I~L~d~pgGaeafell~~FcYg~~i~it~-~NV~~LlcA 123 (674)
|+|.|||+.|...+..|...-+ +|.+||.... .....++-|. -.|..|..|++|.-+|++.+.. -.+..++.-
T Consensus 7 V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~FiD---Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINVGGIRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFFD---RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEETTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEEC---SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEECCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEEe---cChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 7889999999999999987643 4566765421 1234566553 2358999999999999987754 357899999
Q ss_pred hhhcccccc
Q 005842 124 AEYLEMTED 132 (674)
Q Consensus 124 A~~LqMte~ 132 (674)
|+|.++++.
T Consensus 84 a~fy~i~~~ 92 (115)
T 3kvt_A 84 LEFWGLDSN 92 (115)
T ss_dssp HHHHTCCGG
T ss_pred HHHhCCChH
Confidence 999999984
No 32
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=91.47 E-value=0.13 Score=47.04 Aligned_cols=80 Identities=11% Similarity=0.203 Sum_probs=57.4
Q ss_pred eEEEEECCEEEEecCccccccCHHHHHhhcCC-C----CCCCceEecCCCCCCHHHHHHHHHhHhCceeeccc-chHhhH
Q 005842 47 DFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-R----DSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNISGL 120 (674)
Q Consensus 47 DV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~----e~~~~~I~L~d~pgGaeafell~~FcYg~~i~it~-~NV~~L 120 (674)
=|+|.|||+.|..-+..|...-+- |+... + .....++-| +-.+..|+.|++|.-+|++.+.. -.+..|
T Consensus 14 ~V~LNVGG~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNVSGRRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEeCCEEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 478899999999998888654321 23221 1 122344554 23479999999999999987644 357899
Q ss_pred HHhhhhcccccc
Q 005842 121 RCAAEYLEMTED 132 (674)
Q Consensus 121 lcAA~~LqMte~ 132 (674)
+.-|+|.++.+.
T Consensus 88 ~~Ea~fy~i~~l 99 (124)
T 1s1g_A 88 DDELAFYGILPE 99 (124)
T ss_dssp HHHHHHTTCCGG
T ss_pred HHHHHHcCCChH
Confidence 999999999974
No 33
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=90.49 E-value=0.21 Score=44.10 Aligned_cols=82 Identities=11% Similarity=0.144 Sum_probs=57.8
Q ss_pred EEEEECCEEEEecCccccccC-HHHHHhhcCC--CCCCCceEecCCCCCCHHHHHHHHHhHhC-ceeeccc-chHhhHHH
Q 005842 48 FLVQIGDVNFHLHKYPLLSRS-GKMNRLIYES--RDSELNKIVLDDLPGGPEAFELAAKFCYG-IAVDLTA-SNISGLRC 122 (674)
Q Consensus 48 V~v~V~~~~F~lHK~vLas~S-~yfr~lf~~~--~e~~~~~I~L~d~pgGaeafell~~FcYg-~~i~it~-~NV~~Llc 122 (674)
|+|.|||+.|...+..|...- ..+.+|+... -.....++-|.- .+..|+.|++|.-+ |++.+.. -.+..++.
T Consensus 3 v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFiDR---dp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINVSGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFFDR---NRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEETTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEECS---CSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEECCEEEEeeHHHHhcCCCccccchhccccccCCCceeEEEcC---ChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 789999999999998886542 1333444321 112345666532 35899999999998 8887633 35688999
Q ss_pred hhhhcccccc
Q 005842 123 AAEYLEMTED 132 (674)
Q Consensus 123 AA~~LqMte~ 132 (674)
-|+|.++.+.
T Consensus 80 Ea~fy~i~~~ 89 (100)
T 1t1d_A 80 EIKFYELGEN 89 (100)
T ss_dssp HHHHTTCCHH
T ss_pred HHHHcCCCHH
Confidence 9999999973
No 34
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=89.21 E-value=0.14 Score=45.55 Aligned_cols=85 Identities=15% Similarity=0.232 Sum_probs=59.7
Q ss_pred EEEEECCEEEEecCccccccCHHHHHhhcCC-C----CCCCceEecCCCCCCHHHHHHHHHhHhCceeeccc-chHhhHH
Q 005842 48 FLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-R----DSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNISGLR 121 (674)
Q Consensus 48 V~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~----e~~~~~I~L~d~pgGaeafell~~FcYg~~i~it~-~NV~~Ll 121 (674)
|+|.|||+.|...+..|...-+ .|+... + .....++-|.- .|+.|+.|++|.-+|++.+.. ..+..++
T Consensus 2 V~LNVGG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~~~~FiDR---dp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNVSGTRFQTWQDTLERYPD---TLLGSSERDFFYHPETQQYFFDR---DPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEETTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGGTEEEECS---CTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEECCEEEEEeHHHHhcCCC---ccccccCCcccccCCCCcEEEeC---CcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 7899999999999888865432 122221 1 11234555532 358999999999999987643 3578999
Q ss_pred HhhhhcccccccccCcHHHHHH
Q 005842 122 CAAEYLEMTEDLEEGNLIFKTE 143 (674)
Q Consensus 122 cAA~~LqMte~~~~gNL~~~ce 143 (674)
.-|+|.++++. +++.||
T Consensus 76 ~Ea~fy~i~~l-----~~~~cc 92 (105)
T 1nn7_A 76 EELAFFGLIPE-----IIGDCC 92 (105)
T ss_dssp HHHHHHTCCSC-----CBCHHH
T ss_pred HHHHHcCCCHH-----HHHHHH
Confidence 99999999974 345555
No 35
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=88.31 E-value=0.17 Score=47.33 Aligned_cols=82 Identities=12% Similarity=0.216 Sum_probs=58.6
Q ss_pred CeeEEEEECCEEEEecCccccccCHHHHHhhcCC-C----CCCCceEecCCCCCCHHHHHHHHHhHhCceeeccc-chHh
Q 005842 45 PSDFLVQIGDVNFHLHKYPLLSRSGKMNRLIYES-R----DSELNKIVLDDLPGGPEAFELAAKFCYGIAVDLTA-SNIS 118 (674)
Q Consensus 45 lcDV~v~V~~~~F~lHK~vLas~S~yfr~lf~~~-~----e~~~~~I~L~d~pgGaeafell~~FcYg~~i~it~-~NV~ 118 (674)
..=|+|.|||+.|...+..|...-+ .|+... + .....++-|. -.+..|+.|++|.-+|++.+.. ..+.
T Consensus 34 ~~~V~LNVGG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~g~yFiD---Rdp~~F~~ILnflR~G~l~~p~~~~~~ 107 (140)
T 2nz0_B 34 DELIVLNVSGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDTKEYFFD---RDPEVFRCVLNFYRTGKLHYPRYECIS 107 (140)
T ss_dssp CCEEEEEETTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTTTEEEEC---SCHHHHHHHHHHHHHSSBCCCTTSCHH
T ss_pred CCEEEEEECCEEEEeeHHHHhcCCC---eeecccCCcccccCCCCeEEEe---CCcHHHHHHHHHHhcCCcCCCCCcCHH
Confidence 3457889999999999888865432 123221 1 1233455542 3479999999999999987643 3578
Q ss_pred hHHHhhhhcccccc
Q 005842 119 GLRCAAEYLEMTED 132 (674)
Q Consensus 119 ~LlcAA~~LqMte~ 132 (674)
.++.-|+|.++++.
T Consensus 108 ~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 108 AYDDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHHHTCCGG
T ss_pred HHHHHHHHcCCChH
Confidence 99999999999974
No 36
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=81.14 E-value=2.2 Score=33.50 Aligned_cols=33 Identities=24% Similarity=0.494 Sum_probs=26.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 005842 588 KDINTLKFELESVKAKYLELQNDMETLQRQFDK 620 (674)
Q Consensus 588 rEn~~Lk~el~~Mr~rv~eLEk~~~~m~~~~~k 620 (674)
-|.+.||.|++.+|.|+.+|.+++..++..+++
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 367888888888888888888888888887754
No 37
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=72.14 E-value=6.5 Score=30.36 Aligned_cols=36 Identities=19% Similarity=0.218 Sum_probs=31.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 005842 588 KDINTLKFELESVKAKYLELQNDMETLQRQFDKLTK 623 (674)
Q Consensus 588 rEn~~Lk~el~~Mr~rv~eLEk~~~~m~~~~~k~~~ 623 (674)
+.+..||.--+.+=+||.+||..|..+.++++++.+
T Consensus 4 q~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~ 39 (48)
T 3vmx_A 4 RQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNK 39 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 346678888888999999999999999999998864
No 38
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=72.04 E-value=7 Score=30.39 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=34.0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 005842 584 ATAKKDINTLKFELESVKAKYLELQNDMETLQRQFDKLT 622 (674)
Q Consensus 584 ~~~~rEn~~Lk~el~~Mr~rv~eLEk~~~~m~~~~~k~~ 622 (674)
..++.||-.||.|++.=...++.||.|-+.||..+..+.
T Consensus 13 e~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~lq 51 (54)
T 1deb_A 13 EALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQ 51 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHHc
Confidence 357889999999999999999999999999998776543
No 39
>1pd7_B MAD1; PAH2, SIN3, eukaryotic transcriptional regulation, protein-protein interactions; NMR {Mus musculus}
Probab=65.11 E-value=1.6 Score=29.44 Aligned_cols=17 Identities=53% Similarity=0.520 Sum_probs=14.6
Q ss_pred chHhhHHHhhhhccccc
Q 005842 115 SNISGLRCAAEYLEMTE 131 (674)
Q Consensus 115 ~NV~~LlcAA~~LqMte 131 (674)
.||+.|+.||+||+=-|
T Consensus 3 ~nvq~LLeAAeyLErrE 19 (26)
T 1pd7_B 3 MNIQMLLEAADYLERRE 19 (26)
T ss_dssp CSTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 59999999999998543
No 40
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=53.43 E-value=19 Score=28.46 Aligned_cols=35 Identities=20% Similarity=0.218 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 005842 589 DINTLKFELESVKAKYLELQNDMETLQRQFDKLTK 623 (674)
Q Consensus 589 En~~Lk~el~~Mr~rv~eLEk~~~~m~~~~~k~~~ 623 (674)
....||.-=.++-.+|.+||-.|..|.++|+++.+
T Consensus 12 q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 12 QLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556665667778999999999999999999874
No 41
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=47.54 E-value=20 Score=28.02 Aligned_cols=30 Identities=10% Similarity=0.195 Sum_probs=26.7
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 005842 582 GWATAKKDINTLKFELESVKAKYLELQNDM 611 (674)
Q Consensus 582 ~~~~~~rEn~~Lk~el~~Mr~rv~eLEk~~ 611 (674)
....+++||.+||..++.++.++.||....
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999998764
No 42
>1vjh_A BET V I allergen family; structural genomics, center for eukaryotic structural genomics, protein structure initiative, CESG, plant protein; 2.10A {Arabidopsis thaliana} SCOP: d.129.3.1 PDB: 2q3q_A
Probab=44.21 E-value=14 Score=32.98 Aligned_cols=33 Identities=6% Similarity=-0.028 Sum_probs=25.6
Q ss_pred hccCCCCCChhHHHHHHHhcCCCccccCcchhHHHHHHHHhCCC
Q 005842 453 EVARDRNLSLTKFQVLAEALPESARTCDDGLYRAIDSYLKAHPT 496 (674)
Q Consensus 453 EIA~D~nL~~~KF~~LAe~lPd~aR~~~DgLYRAIDiYLKaHp~ 496 (674)
|...|.+.++.++...+ .++++|||-||-+||.
T Consensus 90 e~~~~~~~~p~~~~~~~-----------~~~~k~ie~yll~~p~ 122 (122)
T 1vjh_A 90 EKVHKDIDDPHSIIDES-----------VKYFKKLDEAILNFKE 122 (122)
T ss_dssp EESSTTSCCSHHHHHHH-----------HHHHHHHHHHHHHC--
T ss_pred EECCCCCCCHHHHHHHH-----------HHHHHHHHHHHhhCCC
Confidence 55667788888887666 6789999999999984
No 43
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=42.37 E-value=19 Score=40.10 Aligned_cols=83 Identities=10% Similarity=0.097 Sum_probs=56.3
Q ss_pred eEEEEECCEEEEecCccccccCH-HHHHhhcCC--CCCCCceEecCCCCCCHHHHHHHHHhHhC-ceeeccc-chHhhHH
Q 005842 47 DFLVQIGDVNFHLHKYPLLSRSG-KMNRLIYES--RDSELNKIVLDDLPGGPEAFELAAKFCYG-IAVDLTA-SNISGLR 121 (674)
Q Consensus 47 DV~v~V~~~~F~lHK~vLas~S~-yfr~lf~~~--~e~~~~~I~L~d~pgGaeafell~~FcYg-~~i~it~-~NV~~Ll 121 (674)
=|+|.|||..|...+..|...-+ .+-+++... -+....++-+ +-.++.|+.+++|..+ |++.+.. -.+..++
T Consensus 53 ~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEeCCEEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 46789999999999887764421 111222211 1123456665 2347999999999998 9987643 3466788
Q ss_pred Hhhhhcccccc
Q 005842 122 CAAEYLEMTED 132 (674)
Q Consensus 122 cAA~~LqMte~ 132 (674)
.-|+|.++.+.
T Consensus 130 ~E~~f~~i~~~ 140 (514)
T 2r9r_B 130 EEIRFYELGEE 140 (514)
T ss_dssp HHHHHTTCCHH
T ss_pred HHHHhcCCCHH
Confidence 99999999974
No 44
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=38.59 E-value=30 Score=30.11 Aligned_cols=26 Identities=8% Similarity=0.249 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005842 594 KFELESVKAKYLELQNDMETLQRQFD 619 (674)
Q Consensus 594 k~el~~Mr~rv~eLEk~~~~m~~~~~ 619 (674)
=.||+.||..|.|||..+..||+..+
T Consensus 49 i~Emq~Ir~tvyeLE~~h~kmKq~YE 74 (92)
T 3vp9_A 49 LAEMQQIRNTVYERELTHRKMKDAYE 74 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35799999999999999999998764
No 45
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=35.16 E-value=40 Score=28.23 Aligned_cols=33 Identities=15% Similarity=0.269 Sum_probs=29.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005842 586 AKKDINTLKFELESVKAKYLELQNDMETLQRQF 618 (674)
Q Consensus 586 ~~rEn~~Lk~el~~Mr~rv~eLEk~~~~m~~~~ 618 (674)
.++|.+.||..|..+-.|+..||.|+.-+|.-.
T Consensus 13 VREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~a 45 (78)
T 1dip_A 13 VREEVEILKEQIRELVEKNSQLERENTLLKTLA 45 (78)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 477899999999999999999999998888753
No 46
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=28.54 E-value=91 Score=24.90 Aligned_cols=34 Identities=15% Similarity=0.212 Sum_probs=23.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 005842 585 TAKKDINTLKFELESVKAKYLELQNDMETLQRQF 618 (674)
Q Consensus 585 ~~~rEn~~Lk~el~~Mr~rv~eLEk~~~~m~~~~ 618 (674)
.+..+.+.|+.+-..++.++..|++|...+++-|
T Consensus 27 ~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll 60 (63)
T 1ci6_A 27 ALTGECKELEKKNEALKERADSLAKEIQYLKDLI 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556667777777777777777777777766654
No 47
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.32 E-value=36 Score=29.32 Aligned_cols=34 Identities=12% Similarity=0.002 Sum_probs=27.2
Q ss_pred ecccchHhhHHHhhhhcccccccccCcHHHHHHHHHHHhh
Q 005842 111 DLTASNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVV 150 (674)
Q Consensus 111 ~it~~NV~~LlcAA~~LqMte~~~~gNL~~~ce~FL~~~v 150 (674)
.|+++|...++..|+.+..++ |.++|..|+.+..
T Consensus 7 ~L~~~NCl~i~~~A~~~~~~~------L~~~a~~fi~~nF 40 (105)
T 2eqx_A 7 GVQVGNCLQVMWLADRHSDPE------LYTAAKHCAKTHL 40 (105)
T ss_dssp CCCTTTHHHHHHHHHHTTCHH------HHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHcCCHH------HHHHHHHHHHHHH
Confidence 578888888888888888775 7788888887654
No 48
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=26.74 E-value=46 Score=28.24 Aligned_cols=44 Identities=23% Similarity=0.283 Sum_probs=32.0
Q ss_pred CCcccchHHHHHHHHHHHhcccccCCCCCcccccccccccccccCCChhhHHHHHHHHhhhhhhc
Q 005842 390 GETLYDVDLVQRLLEHFLVQEQTESSSPSRQSFSDKHMYDASQRGNGTSAKMRVARLVDGYLTEV 454 (674)
Q Consensus 390 ~~tlyDvd~V~Ril~~Fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~kVakLvD~YLaEI 454 (674)
.+..++.+++.||+..+...+.. .-+..++..||+++|-|..|.
T Consensus 5 ~~~~~~~~lI~ril~~~f~~~kt---------------------rI~~dAl~l~aeyl~iFV~EA 48 (81)
T 3b0b_C 5 REGGFRKETVERLLRLHFRDGRT---------------------RVNGDALLLMAELLKVFVREA 48 (81)
T ss_dssp --CCCCHHHHHHHHHHHCCSTTC---------------------EECHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhccCcc---------------------cccHHHHHHHHHHHHHHHHHH
Confidence 35678999999999986543221 123468899999999999984
No 49
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=24.77 E-value=1.1e+02 Score=26.56 Aligned_cols=37 Identities=16% Similarity=0.253 Sum_probs=28.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 005842 585 TAKKDINTLKFELESVKAKYLELQNDMETLQRQFDKL 621 (674)
Q Consensus 585 ~~~rEn~~Lk~el~~Mr~rv~eLEk~~~~m~~~~~k~ 621 (674)
.+..|+..|..+++.|+....++.++...||+.++.+
T Consensus 52 ~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 52 HLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3566777788888888888888888888887776654
No 50
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=22.02 E-value=1.6e+02 Score=21.96 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=28.0
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 005842 582 GWATAKKDINTLKFELESVKAKYLELQNDMETLQRQFD 619 (674)
Q Consensus 582 ~~~~~~rEn~~Lk~el~~Mr~rv~eLEk~~~~m~~~~~ 619 (674)
..+++..||+.||..----+.-+.=|||+...+++.|+
T Consensus 11 evaslenenetlkkknlhkkdliaylekeianlrkkie 48 (49)
T 3he5_A 11 EVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKIE 48 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHHHhc
Confidence 35567788888887654556667788999888887764
No 51
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=21.24 E-value=84 Score=27.74 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=24.7
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 005842 581 EGWATAKKDINTLKFELESVKAKYLELQNDM 611 (674)
Q Consensus 581 ~~~~~~~rEn~~Lk~el~~Mr~rv~eLEk~~ 611 (674)
+.|.+++++++.|+.|-++++.+..+||-+.
T Consensus 12 e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 12 EEADTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677788888888888888888888877664
No 52
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=21.22 E-value=63 Score=32.64 Aligned_cols=36 Identities=17% Similarity=0.186 Sum_probs=22.4
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Q 005842 583 WATAKKDINTLKFELESVKAKYLELQ---NDMETLQRQF 618 (674)
Q Consensus 583 ~~~~~rEn~~Lk~el~~Mr~rv~eLE---k~~~~m~~~~ 618 (674)
+..+..||+.||.|+..++.++.+++ .|-..+++.+
T Consensus 21 ~~~l~~eN~~Lk~e~~~l~~~~~~~~~l~~En~rLr~lL 59 (255)
T 2j5u_A 21 LKNTYTENQHLKERLEELAQLESEVADLKKENKDLKESL 59 (255)
T ss_dssp -----CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44567899999999988887665554 4555555554
No 53
>1a92_A Delta antigen; leucine zipper, coiled-coil, oligomerization; 1.80A {Hepatitis delta virus} SCOP: h.4.6.1 PDB: 1by0_A
Probab=20.57 E-value=1e+02 Score=23.73 Aligned_cols=30 Identities=30% Similarity=0.618 Sum_probs=20.2
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 005842 581 EGWATAKKDINTLKFELESVKAKYLELQND 610 (674)
Q Consensus 581 ~~~~~~~rEn~~Lk~el~~Mr~rv~eLEk~ 610 (674)
+.|...++..++|..++.+.+..+..||.+
T Consensus 7 eqWv~~Rkk~eeler~lrk~kk~iKklEde 36 (50)
T 1a92_A 7 EQWVSGRKKLEELERDLRKLKKKIKKLEED 36 (50)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 356666676777777777777777666655
Done!