Query 005843
Match_columns 674
No_of_seqs 294 out of 896
Neff 6.5
Searched_HMMs 46136
Date Thu Mar 28 14:35:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005843.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005843hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02219 probable galactinol-- 100.0 6E-183 1E-187 1520.4 64.9 670 1-674 79-775 (775)
2 PLN02684 Probable galactinol-- 100.0 3E-181 7E-186 1505.7 65.1 664 1-674 79-750 (750)
3 PLN02355 probable galactinol-- 100.0 8E-181 2E-185 1507.3 65.9 670 1-674 79-758 (758)
4 PLN02982 galactinol-raffinose 100.0 6E-178 1E-182 1474.7 60.3 657 1-674 112-865 (865)
5 PLN02711 Probable galactinol-- 100.0 1E-175 3E-180 1461.9 61.7 656 1-674 102-777 (777)
6 PF05691 Raffinose_syn: Raffin 100.0 4E-173 9E-178 1455.2 60.4 647 1-661 81-747 (747)
7 PLN02229 alpha-galactosidase 100.0 6.9E-42 1.5E-46 370.8 30.2 347 113-582 60-422 (427)
8 PLN02692 alpha-galactosidase 100.0 7.9E-42 1.7E-46 368.9 28.9 343 113-580 53-411 (412)
9 PLN02808 alpha-galactosidase 100.0 8.3E-41 1.8E-45 360.2 28.3 340 113-579 29-385 (386)
10 PLN03231 putative alpha-galact 100.0 4.4E-39 9.6E-44 343.3 25.8 301 123-458 3-346 (357)
11 PLN02899 alpha-galactosidase 100.0 9.5E-37 2.1E-41 338.2 24.2 302 113-451 28-371 (633)
12 PF02065 Melibiase: Melibiase; 100.0 6.1E-30 1.3E-34 278.9 25.1 245 76-376 2-257 (394)
13 COG3345 GalA Alpha-galactosida 100.0 2.4E-30 5.2E-35 279.9 19.1 345 33-437 204-601 (687)
14 KOG2366 Alpha-D-galactosidase 100.0 3.5E-29 7.6E-34 261.7 18.4 343 113-581 30-413 (414)
15 cd06592 GH31_glucosidase_KIAA1 99.5 2E-13 4.4E-18 145.4 12.8 149 120-315 12-166 (303)
16 cd06593 GH31_xylosidase_YicI Y 99.3 5.2E-11 1.1E-15 127.2 18.6 208 116-380 6-227 (308)
17 PRK10658 putative alpha-glucos 99.1 4.3E-09 9.3E-14 122.9 23.5 238 82-382 238-488 (665)
18 PRK10426 alpha-glucosidase; Pr 99.0 1.2E-07 2.6E-12 110.6 26.7 237 81-381 178-433 (635)
19 cd06598 GH31_transferase_CtsZ 98.9 3E-08 6.5E-13 106.6 16.2 154 114-314 4-164 (317)
20 cd06595 GH31_xylosidase_XylS-l 98.9 8.5E-08 1.8E-12 101.9 18.0 211 114-383 5-218 (292)
21 PF01055 Glyco_hydro_31: Glyco 98.9 1.3E-07 2.7E-12 106.0 19.7 235 83-382 1-258 (441)
22 cd06591 GH31_xylosidase_XylS X 98.8 6.9E-08 1.5E-12 103.9 16.2 154 115-314 5-159 (319)
23 cd06599 GH31_glycosidase_Aec37 98.7 4.4E-07 9.6E-12 97.6 18.0 153 115-314 5-168 (317)
24 cd06594 GH31_glucosidase_YihQ 98.7 4.6E-07 1E-11 97.4 17.5 219 114-381 4-236 (317)
25 cd06597 GH31_transferase_CtsY 98.6 1.9E-06 4E-11 93.7 18.2 229 114-382 4-256 (340)
26 cd06604 GH31_glucosidase_II_Ma 98.6 2.2E-07 4.9E-12 100.7 11.0 152 114-314 4-159 (339)
27 cd06589 GH31 The enzymes of gl 98.5 3.3E-06 7.1E-11 88.6 17.2 73 127-230 13-86 (265)
28 cd06602 GH31_MGAM_SI_GAA This 98.5 4.9E-06 1.1E-10 90.4 18.4 210 114-381 4-223 (339)
29 COG1501 Alpha-glucosidases, fa 98.5 1.4E-05 3.1E-10 94.8 22.0 233 81-382 235-486 (772)
30 cd06600 GH31_MGAM-like This fa 98.4 3.5E-06 7.6E-11 90.7 14.7 190 115-357 5-200 (317)
31 PLN02763 hydrolase, hydrolyzin 98.4 1.3E-05 2.8E-10 96.4 18.9 170 87-314 163-336 (978)
32 cd06601 GH31_lyase_GLase GLase 98.3 5.4E-06 1.2E-10 89.7 12.3 127 115-313 5-132 (332)
33 cd06603 GH31_GANC_GANAB_alpha 98.2 1.5E-05 3.3E-10 86.5 13.3 151 114-314 4-162 (339)
34 PF10566 Glyco_hydro_97: Glyco 98.0 3.6E-05 7.9E-10 80.7 11.6 125 130-342 24-148 (273)
35 KOG1065 Maltase glucoamylase a 97.5 0.0033 7.2E-08 73.8 17.7 176 81-315 267-449 (805)
36 TIGR01515 branching_enzym alph 92.1 4.7 0.0001 47.6 17.0 152 123-315 144-299 (613)
37 cd06596 GH31_CPE1046 CPE1046 i 88.1 5.6 0.00012 41.8 11.5 50 138-229 45-94 (261)
38 PF13200 DUF4015: Putative gly 86.6 21 0.00045 38.8 15.1 130 136-317 11-150 (316)
39 KOG1066 Glucosidase II catalyt 75.9 19 0.0004 42.7 10.5 157 81-299 328-492 (915)
40 PRK10933 trehalose-6-phosphate 74.2 29 0.00062 40.6 11.9 34 283-317 173-206 (551)
41 PF02638 DUF187: Glycosyl hydr 73.0 83 0.0018 34.0 14.3 145 136-314 17-164 (311)
42 TIGR02456 treS_nterm trehalose 72.0 83 0.0018 36.6 15.0 33 283-316 170-202 (539)
43 PRK12568 glycogen branching en 70.5 1.1E+02 0.0024 37.1 15.6 70 282-352 379-460 (730)
44 cd02932 OYE_YqiM_FMN Old yello 69.6 50 0.0011 35.8 11.9 70 134-231 30-100 (336)
45 COG0296 GlgB 1,4-alpha-glucan 68.2 28 0.0006 41.2 9.9 140 136-318 163-310 (628)
46 PRK14705 glycogen branching en 67.7 1.1E+02 0.0024 39.2 15.5 70 282-352 875-956 (1224)
47 PRK10785 maltodextrin glucosid 67.4 64 0.0014 38.1 12.9 65 136-225 177-242 (598)
48 cd02871 GH18_chitinase_D-like 67.2 67 0.0014 34.6 12.0 64 286-356 92-155 (312)
49 cd04734 OYE_like_3_FMN Old yel 62.4 1.3E+02 0.0029 32.8 13.4 73 134-236 30-103 (343)
50 PRK14582 pgaB outer membrane N 58.8 1.6E+02 0.0035 35.3 14.0 91 208-317 380-471 (671)
51 PRK05402 glycogen branching en 58.0 2.6E+02 0.0057 33.9 16.0 32 282-314 375-407 (726)
52 PF00724 Oxidored_FMN: NADH:fl 56.8 1.9E+02 0.0041 31.6 13.3 70 135-231 33-103 (341)
53 TIGR02402 trehalose_TreZ malto 56.3 1.8E+02 0.0039 33.9 13.8 28 288-315 220-248 (542)
54 PRK14838 undecaprenyl pyrophos 55.4 73 0.0016 33.3 9.3 19 210-229 43-61 (242)
55 PLN00196 alpha-amylase; Provis 54.3 1.5E+02 0.0033 33.6 12.3 83 117-224 25-107 (428)
56 PRK14839 undecaprenyl pyrophos 52.5 92 0.002 32.5 9.4 19 210-229 42-60 (239)
57 PRK14833 undecaprenyl pyrophos 51.8 1.2E+02 0.0026 31.6 10.1 19 210-229 37-55 (233)
58 PRK12313 glycogen branching en 51.1 3E+02 0.0064 32.8 14.8 33 281-314 279-312 (633)
59 PLN02361 alpha-amylase 50.4 2.1E+02 0.0045 32.2 12.6 81 116-224 11-91 (401)
60 PRK14706 glycogen branching en 50.1 1.4E+02 0.0031 35.6 11.7 71 281-352 276-356 (639)
61 PRK14842 undecaprenyl pyrophos 48.8 1.1E+02 0.0024 31.9 9.4 19 210-229 41-59 (241)
62 cd00598 GH18_chitinase-like Th 48.2 65 0.0014 31.7 7.5 65 285-357 85-149 (210)
63 PRK14837 undecaprenyl pyrophos 46.5 1.4E+02 0.0029 31.1 9.5 19 210-229 39-57 (230)
64 PRK14835 undecaprenyl pyrophos 45.8 97 0.0021 33.0 8.6 23 388-410 236-258 (275)
65 TIGR02403 trehalose_treC alpha 45.3 2.5E+02 0.0053 32.8 12.6 34 282-316 165-198 (543)
66 TIGR00055 uppS undecaprenyl di 43.0 1.7E+02 0.0037 30.3 9.6 19 210-229 32-50 (226)
67 PRK14841 undecaprenyl pyrophos 42.9 2E+02 0.0044 29.8 10.2 19 210-229 36-54 (233)
68 PRK14840 undecaprenyl pyrophos 41.8 1.8E+02 0.0038 30.6 9.6 19 210-229 55-73 (250)
69 PLN02447 1,4-alpha-glucan-bran 39.1 2.3E+02 0.005 34.6 11.2 66 282-348 361-440 (758)
70 cd02803 OYE_like_FMN_family Ol 37.1 1E+02 0.0022 33.0 7.4 29 285-313 132-163 (327)
71 PLN02784 alpha-amylase 36.5 4.7E+02 0.01 32.5 13.1 79 119-224 505-583 (894)
72 PRK10240 undecaprenyl pyrophos 36.4 2.8E+02 0.0062 28.7 10.1 19 210-229 26-44 (229)
73 PLN02960 alpha-amylase 35.2 2.8E+02 0.0061 34.4 11.1 65 282-347 527-604 (897)
74 PLN03244 alpha-amylase; Provis 34.0 3.2E+02 0.0068 33.6 11.1 65 282-347 502-579 (872)
75 cd02879 GH18_plant_chitinase_c 33.9 1.2E+02 0.0026 32.4 7.2 69 285-356 89-157 (299)
76 cd00475 CIS_IPPS Cis (Z)-Isopr 33.6 3.2E+02 0.0069 28.1 9.9 19 210-229 33-51 (221)
77 cd06548 GH18_chitinase The GH1 32.7 1.7E+02 0.0037 31.5 8.2 30 285-314 106-135 (322)
78 cd02875 GH18_chitobiase Chitob 31.4 96 0.0021 34.1 6.1 31 285-315 93-123 (358)
79 cd02930 DCR_FMN 2,4-dienoyl-Co 31.1 5E+02 0.011 28.3 11.6 23 208-231 77-100 (353)
80 PRK14832 undecaprenyl pyrophos 30.9 3.3E+02 0.0071 28.7 9.6 19 210-229 51-69 (253)
81 KOG2500 Uncharacterized conser 30.6 38 0.00082 34.8 2.5 33 551-583 43-76 (253)
82 COG0071 IbpA Molecular chapero 30.4 93 0.002 29.5 5.1 44 628-673 99-146 (146)
83 cd06542 GH18_EndoS-like Endo-b 29.3 1.8E+02 0.004 29.9 7.5 70 286-359 86-155 (255)
84 cd02872 GH18_chitolectin_chito 29.2 1.4E+02 0.0031 32.5 7.0 30 285-314 93-122 (362)
85 cd02874 GH18_CFLE_spore_hydrol 27.9 1.7E+02 0.0038 31.1 7.3 30 285-314 84-113 (313)
86 PF15016 DUF4520: Domain of un 27.8 1.6E+02 0.0036 25.7 5.6 46 618-663 8-57 (85)
87 PRK14828 undecaprenyl pyrophos 27.4 6.4E+02 0.014 26.6 11.1 19 210-229 60-78 (256)
88 cd06543 GH18_PF-ChiA-like PF-C 26.1 2.6E+02 0.0056 30.0 8.1 64 287-358 87-150 (294)
89 PRK13840 sucrose phosphorylase 25.6 2.3E+02 0.0051 32.7 8.0 30 285-315 168-197 (495)
90 COG1902 NemA NADH:flavin oxido 25.0 6E+02 0.013 28.2 10.8 23 208-231 83-106 (363)
91 COG1649 Uncharacterized protei 24.7 1E+03 0.023 26.9 12.6 142 134-315 60-210 (418)
92 cd02876 GH18_SI-CLP Stabilin-1 23.5 1.9E+02 0.0042 30.9 6.6 27 285-311 89-115 (318)
93 cd02873 GH18_IDGF The IDGF's ( 23.2 2.3E+02 0.0051 31.8 7.4 30 285-314 102-131 (413)
94 PRK13523 NADPH dehydrogenase N 22.6 8.3E+02 0.018 26.6 11.3 29 285-313 133-164 (337)
95 COG3469 Chitinase [Carbohydrat 22.4 1.6E+02 0.0035 31.0 5.3 61 289-357 119-181 (332)
96 PRK14830 undecaprenyl pyrophos 22.1 8.7E+02 0.019 25.5 10.8 19 210-229 55-73 (251)
97 cd06545 GH18_3CO4_chitinase Th 21.4 2.2E+02 0.0047 29.4 6.3 30 285-314 80-109 (253)
98 cd02878 GH18_zymocin_alpha Zym 21.0 3.4E+02 0.0073 29.6 7.9 30 285-314 88-117 (345)
99 PF14307 Glyco_tran_WbsX: Glyc 21.0 1.1E+03 0.024 25.7 13.2 146 130-355 50-199 (345)
100 cd06544 GH18_narbonin Narbonin 21.0 1.9E+02 0.0042 30.2 5.8 27 288-314 97-123 (253)
101 cd06549 GH18_trifunctional GH1 20.4 2.7E+02 0.0059 29.6 7.0 31 284-314 84-114 (298)
102 PF13200 DUF4015: Putative gly 20.4 2.8E+02 0.006 30.2 6.9 64 87-153 241-305 (316)
103 PF00150 Cellulase: Cellulase 20.0 6.5E+02 0.014 25.5 9.6 23 209-232 63-85 (281)
No 1
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=100.00 E-value=5.7e-183 Score=1520.38 Aligned_cols=670 Identities=51% Similarity=0.968 Sum_probs=638.7
Q ss_pred CCCcccCCCCCCCcceeeeeEeecCCCCCCCCCCCCceEEEEEEeecCceEEEEecCCCCeEEEEEecCCCccccccCce
Q 005843 1 MIPRMGNSASDIPIETQMLLLEASEKEKGPTSDDASTSYILFLPVLDGEFRSSLQGNSSNELEFCIESGNPDIVTSESLR 80 (674)
Q Consensus 1 ~~~~~g~~~~~~p~~tq~~l~e~~~~~~~~~~~~~~~~y~v~L~~s~g~f~a~l~~~~~~~~~l~~~sg~~~~~~~~~~~ 80 (674)
||||||++|+|||.||||||+|.++..++.+++++...|+|+||+++|.|||+||++.++++.+|+|+|++.++.++...
T Consensus 79 mt~~~G~~g~dip~eTQ~~l~e~~~~~~~~~~~~~~~~Y~~~lP~~eg~fRa~Lqg~~~~~l~iclesg~~~v~~~~~~~ 158 (775)
T PLN02219 79 MTQRMGSCGKDIPLETQFMLLESKDEVEGGNGDDAPTIYTVFLPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQGLH 158 (775)
T ss_pred cchhhccCCCcCCcceEEEEEEcCCCccccccccCCcceEEEEeecCCceEEEecCCCCCcEEEEEecCCccccccccce
Confidence 99999999999999999999999964332233344557999999999999999999999999999999999999888889
Q ss_pred EEEEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEe
Q 005843 81 AVFVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIID 160 (674)
Q Consensus 81 ~v~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viID 160 (674)
.++|++|+|||++|++|++++++|+++|++|++|++|+++|+|||||||+||++|||++|+++++.|+++|+|++|||||
T Consensus 159 ~v~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viID 238 (775)
T PLN02219 159 LVYMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIID 238 (775)
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCcCCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcc
Q 005843 161 DGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLV 240 (674)
Q Consensus 161 DGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~ 240 (674)
||||+..++.++.++...+|.||.+||++|++|.||+.. +...+||.|||++|+.||+++||||||||||++||||||+
T Consensus 239 DGwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~KF~~~-~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~ 317 (775)
T PLN02219 239 DGWQQIENKEKDENCVVQEGAQFATRLTGIKENAKFQKN-DQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVK 317 (775)
T ss_pred cCccccccccccccccccccchhhhhhcccccccccccc-ccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcC
Confidence 999999888766677888999999999999999999852 1233688999999999999999999999999999999999
Q ss_pred cCCcCcccccCcccccCCCCCCcccCCccccccccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhc
Q 005843 241 LNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETIC 320 (674)
Q Consensus 241 p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~ 320 (674)
|+++++++|++++++|..+||+..++||+++++ +..+|+++++|+++++||++||+||+++|||+||||+|+.+++++
T Consensus 318 P~~~~~~~Y~~~~~~p~~spg~~~~~pd~a~d~--l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~ 395 (775)
T PLN02219 318 PAAAGMEHYDSALAYPVQSPGVLGNQPDIVMDS--LSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLG 395 (775)
T ss_pred CCCcccccccccccccccCCCccccCcchhhhh--hhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHHHhh
Confidence 999999999999999999999999999999998 888999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHHHhhCCCCceEEeecCCCCccccccccceEecCCccCCCCCChhhHHHHHHHhhhhhcCC
Q 005843 321 SGLGSRVSLTRHFQQALEESIATNFKDNSIICCMAQNTDSIFHSKRSAITRASDDYYPKNPTTQTLHIAAVAFNSIFLGE 400 (674)
Q Consensus 321 ~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~~~~~l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~na~nsl~~g~ 400 (674)
.++++|++++++|++||++|++|||+++++|+||||+++++|+.++++++|+||||||++|++|++||++||||+||+|+
T Consensus 396 ~~~ggrv~la~~y~~ALe~S~~r~F~~ng~I~CMsh~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLllg~ 475 (775)
T PLN02219 396 AGHGGRVSLTRSYQQALEASIARNFTDNGCISCMCHNTDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGE 475 (775)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeecccccccCCCccCcchhhhhhhhhHHhcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCCccCcccchhHHHHHHHHHHcCCceEeecCCCCCcHHHHHHhhccCCceeeeCCCCCCCccccccccCCCCcceE
Q 005843 401 VVVPDWDMFYSQHCAAEFHAVARAVGGCGVYVSDKPGKHDFKILKRLVLADGSVLRAKYPGRPSRDCLFNDPVMDGKSLL 480 (674)
Q Consensus 401 ~~~pD~DMf~s~h~~a~~Haa~raisggPvyisD~pg~hd~~lL~~lv~pdG~vlr~~~~g~pt~d~lf~dp~~~~~~~L 480 (674)
++|||||||||.|++|++||++||||||||||||+||+||++|||+|++|||+||||+.||+|||||||.||++|++++|
T Consensus 476 ~v~PDWDMFqS~Hp~A~~HAaaRAiSGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDclF~Dp~~dg~slL 555 (775)
T PLN02219 476 FMQPDWDMFHSLHPAAEYHGAARAVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLL 555 (775)
T ss_pred ccccCchhceecCccHHHHHHHHhhcCCcEEEecCCCCccHHHHHHhhCCCCceeccccCCCcchhhhccccCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeccCceEEEEeecCCCCCCCccccccccccccccceeeeecCCccchhhhhcCCCCCCcEEEEEecCCeEEeccCC
Q 005843 481 KIWNLNKCTGVIGVFNCQGAGSWPCTEKESSVQENVDSVISGKVSPADVEYLEEVSGKQWTGDCAVFSFNTGSLFRLAKA 560 (674)
Q Consensus 481 ki~~~~~~~~vvg~FN~~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~a~~~~~~~~~vy~~~~g~~~~~~~~ 560 (674)
||||+|+++||||+|||||++ ||++++++++|+.++.++|+.|++.||+++.++++.+|+++|+||+|++|++++++++
T Consensus 556 KIwn~n~~~gviG~FNcqGag-W~~~~~~~~~~~~~~~~~s~~v~~~Dv~~i~~~a~~~w~~~~~vy~~~sg~l~~l~~~ 634 (775)
T PLN02219 556 KIWNVNKCTGVVGVFNCQGAG-WCKIEKKTRIHDTSPGTLTGSVCADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKG 634 (775)
T ss_pred EEEEcccccceEEEEeccCCC-CCchhhccccccCCCcceEEEEcchhccchhhccccCcCCCEEEEEeccCeEEEcCCC
Confidence 999999999999999999998 9999999999999999999999999999999999989999999999999999999989
Q ss_pred CeEEEEeecCceEEEEEeeeeeeccceeEEEeeccccccCCcceeEEeeee--cC----------------------Ccc
Q 005843 561 ESFGIALKVMQCDVFTVSPIKVYNQKIQFAPIGLTNMYNSGGAVESVDLTN--DA----------------------SSC 616 (674)
Q Consensus 561 ~~~~v~L~~~~~ei~t~~pv~~~~~~~~~A~lGL~~k~~~~aAV~~~~~~~--~~----------------------~~~ 616 (674)
+.++|+|++++|||||++||+.+..+++||||||++|||++|||+++++.. +. ...
T Consensus 635 ~~~~vtL~~~~~Ei~tv~Pv~~~~~~~~fApiGL~~m~n~ggAi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (775)
T PLN02219 635 ASIPVTLKVLEYELFHFCPLKEIATNISFAPIGLLDMFNSGGAVEQFEIHMVSDKAPELFDGEISSELSTSLSENRSPTA 714 (775)
T ss_pred CceEEEecCCcEEEEEEeeEEEecCCcEEEecchhhcccCceeeEEeEeecccccccccccccccccccccccccCCCCc
Confidence 999999999999999999999999889999999999999999999999852 10 134
Q ss_pred EEEEEEeecceeeEeecCCCceEEecCeeeeeEEeCCCceEEEEcC--C-CCceeeeeEeC
Q 005843 617 KIHIKGRGGGSFGAYSSTKPSSILLNSKNEEFKFSAEDNLLTVTIP--P-TTSSWDITLCY 674 (674)
Q Consensus 617 ~v~v~lkg~G~~g~Yss~~P~~~~vdg~~~~f~yd~~~gll~v~lp--~-~~~~~~v~i~~ 674 (674)
.|+|+|||||+||+|||++|++|.|||++++|+|+++||+++|+|| + ++++|.|||++
T Consensus 715 ~v~~~v~G~G~f~aYsS~~P~~c~vd~~~~~f~y~~~sg~~~~~l~~~~~~~~~~~v~~~~ 775 (775)
T PLN02219 715 TIALSVRGCGRFGAYSSQRPLKCAVGSTETDFTYDAEVGLLTLTLPVTEEEMYRWHVEIQV 775 (775)
T ss_pred eEEEEEEcccceeeEecCCCeEEEECCEEeeeEEcCCCCeEEEEccCCcccCceeeEEEeC
Confidence 5999999999999999999999999999999999999999999994 4 78999999985
No 2
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=3.2e-181 Score=1505.74 Aligned_cols=664 Identities=46% Similarity=0.873 Sum_probs=629.2
Q ss_pred CCCcccCCCCCCCcceeeeeEeecCCCCCCC-C--CCCCceEEEEEEeecCceEEEEecCCCCeEEEEEecCCCcccccc
Q 005843 1 MIPRMGNSASDIPIETQMLLLEASEKEKGPT-S--DDASTSYILFLPVLDGEFRSSLQGNSSNELEFCIESGNPDIVTSE 77 (674)
Q Consensus 1 ~~~~~g~~~~~~p~~tq~~l~e~~~~~~~~~-~--~~~~~~y~v~L~~s~g~f~a~l~~~~~~~~~l~~~sg~~~~~~~~ 77 (674)
||||||++|+|||.||||||+|.+++++.+. + +++...|+|+||+++|.|||+||++.+++++||+|||+..++.++
T Consensus 79 mt~~~G~~g~dip~eTQ~ll~e~~~~~~~~~~~~~~~~~~~Y~v~lPi~eg~fRa~Lqg~~~d~~~ic~eSg~~~v~~s~ 158 (750)
T PLN02684 79 MAQKMGDMGRDIPLETQFLLVETKDGSHLESDGANEENQKVYTVFLPLIEGSFRACLQGNVNDELELCLESGDVDTKRSS 158 (750)
T ss_pred cchhhcCCCCCCCchhEEEEEEcCCCcccccccccccCCcceEEEEEecCCceEEEecCCCCCcEEEEEecCCccccccc
Confidence 9999999999999999999999997543211 1 123346999999999999999999999999999999999999999
Q ss_pred CceEEEEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEE
Q 005843 78 SLRAVFVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFL 157 (674)
Q Consensus 78 ~~~~v~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~v 157 (674)
...+++|++|+|||++|++|++++++|+++|++|++|++|+++|+||||||||||++|||++|+++++.|+++|+|++||
T Consensus 159 ~~~~~~v~~g~~Py~~i~~a~~~v~~~l~tf~~reeK~~P~~~D~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~v 238 (750)
T PLN02684 159 FTHSLFIHAGTDPFQTITDAIRAVKLHLKSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFV 238 (750)
T ss_pred cceeEEEecCCCHHHHHHHHHHHHHHHhhccchhhhccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCcccCCCCCcCCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccC
Q 005843 158 IIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWG 237 (674)
Q Consensus 158 iIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWg 237 (674)
|||||||+..+|+++.++.. .+.||.+||++|++|.|||.. ..++.|||++|+.||+++||||||||||++||||
T Consensus 239 IIDDGwQs~~~d~~~~~~~~-~~~q~~~rL~~f~en~KF~~~----~~p~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWG 313 (750)
T PLN02684 239 IIDDGWQSVGGDPTVEAGDE-KKEQPLLRLTGIKENEKFKKK----DDPNVGIKNIVNIAKEKHGLKYVYVWHAITGYWG 313 (750)
T ss_pred EEeccccccccccccccccc-ccchhhhhhccCccccccccc----cCCCccHHHHHHHHHhhcCCcEEEEEeeeccccc
Confidence 99999999988765444333 347999999999999999942 1234799999999999999999999999999999
Q ss_pred CcccCCcCcccccCcccccCCCCCCcccCCccccccccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchh
Q 005843 238 GLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILE 317 (674)
Q Consensus 238 GI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~ 317 (674)
||+|+++++++|++++++|+.+||++.++||++.+. +.+.|+++++|+++++||++||+||+++|||+||||+|..++
T Consensus 314 Gv~P~~~~~~~Y~s~~~~p~~s~gv~~~~p~~~~d~--l~~~g~glv~P~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~le 391 (750)
T PLN02684 314 GVRPGVKEMEEYGSVMKYPNVSKGVVENDPTWKTDV--MTLQGLGLVNPKKVYKFYNELHSYLADAGIDGVKVDVQCILE 391 (750)
T ss_pred ccCCCCcchhhccccccccccCccccccCccccccc--cccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEChhhhHH
Confidence 999999999999999999999999999999999988 777899999999999999999999999999999999999999
Q ss_pred hhcCCCCCchhHHHHHHHHHHHHHHhhCCCCceEEeecCCCCccccccccceEecCCccCCCCCChhhHHHHHHHhhhhh
Q 005843 318 TICSGLGSRVSLTRHFQQALEESIATNFKDNSIICCMAQNTDSIFHSKRSAITRASDDYYPKNPTTQTLHIAAVAFNSIF 397 (674)
Q Consensus 318 ~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~~~~~l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~na~nsl~ 397 (674)
+++.++++|++++++|++||++|++|||+++++|+||||+++++|+++.++++|+||||||++|++|++||++||||+||
T Consensus 392 ~l~~~~ggrv~l~~ay~~ALe~S~~r~F~~ngvI~CMs~~~d~i~~sk~sav~R~SDDF~p~dP~sh~~Hi~~~AyNSLl 471 (750)
T PLN02684 392 TLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACMSHNTDALYCSKQTAVVRASDDFYPRDPVSHTIHIAAVAYNSVF 471 (750)
T ss_pred HhhcccCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecccCchhhhcccccceeeeccccccCCCccchhhhhhhhhhhhh
Confidence 99888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCCCCccCcccchhHHHHHHHHHHcCCceEeecCCCCCcHHHHHHhhccCCceeeeCCCCCCCccccccccCCCCc
Q 005843 398 LGEVVVPDWDMFYSQHCAAEFHAVARAVGGCGVYVSDKPGKHDFKILKRLVLADGSVLRAKYPGRPSRDCLFNDPVMDGK 477 (674)
Q Consensus 398 ~g~~~~pD~DMf~s~h~~a~~Haa~raisggPvyisD~pg~hd~~lL~~lv~pdG~vlr~~~~g~pt~d~lf~dp~~~~~ 477 (674)
+|+++|||||||||.|+++++||++||||||||||||+||+||++|||+|++|||+||||+.||+|||||||.||++|++
T Consensus 472 lg~~v~PDWDMFqS~hp~A~~HAaaRAisGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDcLF~DP~~dg~ 551 (750)
T PLN02684 472 LGEFMQPDWDMFHSLHPAAEYHASARAISGGPLYVSDAPGKHNFELLKKLVLPDGSILRARLPGRPTRDCLFSDPARDGV 551 (750)
T ss_pred hccccccCcccceecCccHHHHHHHHhhcCCceEEecCCCCccHHHHHhhhCCCCcccccccCCccchhhhccCcccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeccCceEEEEeecCCCCCCCccccccccccccccceeeeecCCccchhhhhcCC-CCCCcEEEEEecCCeEEe
Q 005843 478 SLLKIWNLNKCTGVIGVFNCQGAGSWPCTEKESSVQENVDSVISGKVSPADVEYLEEVSGK-QWTGDCAVFSFNTGSLFR 556 (674)
Q Consensus 478 ~~Lki~~~~~~~~vvg~FN~~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~a~~-~~~~~~~vy~~~~g~~~~ 556 (674)
++|||||+|+++||||+|||||++ |+++.+++.+|+.++.++|+.|+++|++++.++|+. .|+++|+||+|++|++++
T Consensus 552 slLKIwn~n~~tGViG~FNcqGag-w~~~~~~~~~~~~~~~~~s~~v~~~Dv~~~~~~a~~~~w~~~~~vy~h~s~~l~~ 630 (750)
T PLN02684 552 SLLKIWNMNKYTGVLGVYNCQGAA-WSSTERKNIFHQTKTDSLTGSIRGRDVHLIAEAATDPNWNGDCAVYCHSRGELIT 630 (750)
T ss_pred cEEEEEEecCCCceEEEEeccCCc-cCccccccccCCCCCccceeeecccccchhhhhccCCCCCCCEEEEEecCCeEEe
Confidence 999999999999999999999998 999999999999999999999999999999999986 499999999999999999
Q ss_pred ccCCCeEEEEeecCceEEEEEeeeeeeccceeEEEeeccccccCCcceeEEeeeecCCccEEEEEEeecceeeEeecCCC
Q 005843 557 LAKAESFGIALKVMQCDVFTVSPIKVYNQKIQFAPIGLTNMYNSGGAVESVDLTNDASSCKIHIKGRGGGSFGAYSSTKP 636 (674)
Q Consensus 557 ~~~~~~~~v~L~~~~~ei~t~~pv~~~~~~~~~A~lGL~~k~~~~aAV~~~~~~~~~~~~~v~v~lkg~G~~g~Yss~~P 636 (674)
+++++.++|+|++++|||||++||+.|.++++||||||+||||++|||+++++..++ .+|+|+|||||+||+|+|.+|
T Consensus 631 l~~~~~~~vtL~~~~~Ei~t~~Pv~~~~~~~~fApiGL~~m~n~ggAi~~~~~~~~~--~~v~v~vkg~G~~g~YsS~~P 708 (750)
T PLN02684 631 MPYNASLPVSLKVLEHEIFTVTPIKHLAPGFSFAPLGLINMYNAGGAIEGLKYEVKK--GKVVMEVKGCGKFGAYSSVKP 708 (750)
T ss_pred cCCCCceEEEecCCcEEEEEEeeEEEecCCcEEEecchhhcccCcceEEEEEEeccc--ceEEEEEEecceeEEEEcCCC
Confidence 998999999999999999999999999888999999999999999999999997643 359999999999999999999
Q ss_pred ceEEecCeeeeeEEeCCCceEEEEcC--C-CCc-eeeeeEeC
Q 005843 637 SSILLNSKNEEFKFSAEDNLLTVTIP--P-TTS-SWDITLCY 674 (674)
Q Consensus 637 ~~~~vdg~~~~f~yd~~~gll~v~lp--~-~~~-~~~v~i~~ 674 (674)
++|.|||++++|+|++++|+++|+|| + +++ +|.|||++
T Consensus 709 ~~c~v~~~~~~f~y~~~~g~~~~~~~~~~~~~~~~~~v~~~~ 750 (750)
T PLN02684 709 RRCVVESNEIAFEYDSSSGLVTFELDKMPEEGKRLHLVEVEL 750 (750)
T ss_pred cEEEECCEEEeeEEcCCCCeEEEEcCCCccccCcceEEEEeC
Confidence 99999999999999999999999995 4 777 99999985
No 3
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=100.00 E-value=7.8e-181 Score=1507.25 Aligned_cols=670 Identities=49% Similarity=0.918 Sum_probs=637.7
Q ss_pred CCCcccCCCCCCCcceeeeeEeecCCCCCCCCC----CCCceEEEEEEeecCceEEEEecCCCCeEEEEEecCCCccccc
Q 005843 1 MIPRMGNSASDIPIETQMLLLEASEKEKGPTSD----DASTSYILFLPVLDGEFRSSLQGNSSNELEFCIESGNPDIVTS 76 (674)
Q Consensus 1 ~~~~~g~~~~~~p~~tq~~l~e~~~~~~~~~~~----~~~~~y~v~L~~s~g~f~a~l~~~~~~~~~l~~~sg~~~~~~~ 76 (674)
||||||++|+|||.||||||+|.+++.++.++. ++...|+|+||+++|+|||+||++.++++.||+|||+..+..+
T Consensus 79 mt~~~G~~g~dip~eTQ~ll~e~~~~~~~~~~~~~~~~~~~~Y~v~lPi~~g~fra~Lqg~~~~~l~ic~eSG~~~v~~~ 158 (758)
T PLN02355 79 MTQRMGTCGQDIPFETQFLIVEARDGSHLGNGGEGGEDQSSVYTVFLPILEGDFRAVLQGNEHNELEICLESGDPAVDEF 158 (758)
T ss_pred ccccccCCCcCCChhheEEEEEcCCcccccccccccCCCCceeEEEEeecCCceEEEEecCCCCcEEEEEEcCCCccccc
Confidence 999999999999999999999999753332222 1234699999999999999999999999999999999999999
Q ss_pred cCceEEEEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccE
Q 005843 77 ESLRAVFVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKF 156 (674)
Q Consensus 77 ~~~~~v~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~ 156 (674)
+....+++++|+|||+++++|++++++|+++|++|++|++|+++|+|||||||+||++|||++|+++++.|++.|++++|
T Consensus 159 ~~~~~v~v~~g~dpy~li~~a~~~v~~hl~tf~~re~K~~P~~ld~~GWCTW~afy~~Vt~~~I~~~l~~l~~~g~p~~~ 238 (758)
T PLN02355 159 EGSHLVFVAAGSDPFDVITNAVKAVEKHLQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGVTPKF 238 (758)
T ss_pred cCceEEEEEcCCCHHHHHHHHHHHHHHHhccccchhhccCCcccceeeEEehhHhhccCCHHHHHHHHHHHHhCCCCccE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCcccCCCCCcCCCCCCccccccCCcccCccccCCCCCC-C-C-CCCcCCCChHHHHHHHHHhCCCcEEEEEeecc
Q 005843 157 LIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGT-T-G-DDQKETSGLKDFVLDIKKNFCLKYVYVWHALM 233 (674)
Q Consensus 157 viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~-~-~-~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~ 233 (674)
||||||||+...|..+.++..+++.||.+||++|++|.|||.. + + ..+.++.|||++|+.||+++||||||||||++
T Consensus 239 viIDDGwQs~~~d~~~~~~~~~~~~q~~~rL~~f~~n~KF~~~~~~~~~~~~~~~Glk~~V~~iK~~~~vk~V~VWHAL~ 318 (758)
T PLN02355 239 VIIDDGWQSVGMDPTGIECLADNSANFANRLTHIKENHKFQKNGKEGHRVDDPALGLGHIVTEIKEKHSLKYVYVWHAIT 318 (758)
T ss_pred EEEeccccccccccccccccccccchhhhhhccccccccccccccccccccCCCCcHHHHHHHHHhhcCCcEEEEeeeec
Confidence 9999999998777666677788899999999999999999942 1 1 12344789999999999999999999999999
Q ss_pred CccCCcccCCcCcccccCcccccCCCCCCcccCCccccccccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccC
Q 005843 234 GYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQ 313 (674)
Q Consensus 234 GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q 313 (674)
||||||+|+++++++|++++++|..+||+..++||.++++ +..+|+++++|+++++||++||+||+++|||+||||+|
T Consensus 319 GYWGGv~P~~~~~~~Y~~~~~~p~~spGv~~~~~~~a~d~--i~~~G~glv~Pe~~~~FY~~~hsyL~s~GVDgVKVD~Q 396 (758)
T PLN02355 319 GYWGGVKPGVAGMEHYESKMSYPVSSPGVQSNEPCDALES--ITTNGLGLVNPEKVFSFYNELHSYLASAGIDGVKVDVQ 396 (758)
T ss_pred ceecCcCCCCcccccccccccccccCCcccccCcchhhhh--cccCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchh
Confidence 9999999999999999999999999999999999999998 88899999999999999999999999999999999999
Q ss_pred cchhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCCceEEeecCCCCccccccccceEecCCccCCCCCChhhHHHHHHHh
Q 005843 314 NILETICSGLGSRVSLTRHFQQALEESIATNFKDNSIICCMAQNTDSIFHSKRSAITRASDDYYPKNPTTQTLHIAAVAF 393 (674)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~~~~~l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~na~ 393 (674)
..+++++.++++|++++++|++||++|++|||+++.+|+||||+++++|+++.++++|+||||||++|++|++||++|||
T Consensus 397 ~~le~l~~g~ggrv~la~~y~~ALe~S~~r~F~~ngvI~CMs~~~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~~Ay 476 (758)
T PLN02355 397 NILETLGAGHGGRVKLARKYHQALEASIARNFPDNGIISCMSHNTDGLYSAKRTAVIRASDDFWPRDPASHTIHIASVAY 476 (758)
T ss_pred hhHHHhhcCCCcHHHHHHHHHHHHHHHHHHhCCCCceEEecccCchhhcccccceeeeeccccccCCCccCchhhhhhhh
Confidence 99999998999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCcCCCCccCcccchhHHHHHHHHHHcCCceEeecCCCCCcHHHHHHhhccCCceeeeCCCCCCCccccccccC
Q 005843 394 NSIFLGEVVVPDWDMFYSQHCAAEFHAVARAVGGCGVYVSDKPGKHDFKILKRLVLADGSVLRAKYPGRPSRDCLFNDPV 473 (674)
Q Consensus 394 nsl~~g~~~~pD~DMf~s~h~~a~~Haa~raisggPvyisD~pg~hd~~lL~~lv~pdG~vlr~~~~g~pt~d~lf~dp~ 473 (674)
||||+|+++|||||||||.|++|++||++||||||||||||+||+||++|||+|++|||+||||+.||+|||||||.||+
T Consensus 477 NSLllg~~v~PDWDMF~S~hp~A~~HAaaRAisGGPIYvSD~PG~hdf~LLk~LvlpdGsIlR~~~pg~PtrDclF~Dp~ 556 (758)
T PLN02355 477 NTIFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRAKLPGRPTRDCLFSDPA 556 (758)
T ss_pred hhhhhccccccCcccceecCccHHHHHHHHhccCCcEEEecCCCCccHHHHHhhhCCCCceeccccCCCcchhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceEEEEeeccCceEEEEeecCCCCCCCccccccccccccccceeeeecCCccchhhhhcCCCCCCcEEEEEecCCe
Q 005843 474 MDGKSLLKIWNLNKCTGVIGVFNCQGAGSWPCTEKESSVQENVDSVISGKVSPADVEYLEEVSGKQWTGDCAVFSFNTGS 553 (674)
Q Consensus 474 ~~~~~~Lki~~~~~~~~vvg~FN~~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~a~~~~~~~~~vy~~~~g~ 553 (674)
+|++++|||||+|+++||||+|||||++ ||++++++++|++++.++++.|++.||+++.++++.+|+++++||+|++|+
T Consensus 557 ~dg~slLKIwn~nk~sGviG~FNcqGag-w~~~~~~~~~~~~~~~~l~~~v~~~Dv~~~~~~a~~~w~~~~~vy~~~sg~ 635 (758)
T PLN02355 557 RDGKSLLKIWNLNEFTGVIGVFNCQGAG-WCRVGKKNLIHDEQPGTITGVIRAKDVDYLPKVADDEWTGDSIVYSHLGGE 635 (758)
T ss_pred cCCceEEEEEEcCCcccEEEEEeccCCc-ccchhccccccCCCCceeEEEEccccccchhhccccCCCCCeEEEEecCce
Confidence 9999999999999999999999999998 999999999999999999999999999999999988899999999999999
Q ss_pred EEeccCCCeEEEEeecCceEEEEEeeeeeeccceeEEEeeccccccCCcceeEEeeeecCCccEEEEEEeecceeeEeec
Q 005843 554 LFRLAKAESFGIALKVMQCDVFTVSPIKVYNQKIQFAPIGLTNMYNSGGAVESVDLTNDASSCKIHIKGRGGGSFGAYSS 633 (674)
Q Consensus 554 ~~~~~~~~~~~v~L~~~~~ei~t~~pv~~~~~~~~~A~lGL~~k~~~~aAV~~~~~~~~~~~~~v~v~lkg~G~~g~Yss 633 (674)
+.+++.++.++|+|++++|||||++||+.|..+++||||||+||||++|||+++++..+ ++.+++|+|||+|+||+|+|
T Consensus 636 l~~~~~~~~~~vtL~~~~~eiftv~Pi~~~~~~~~fApIGL~~m~nsggAV~~~~~~~~-~~~~v~v~vkg~G~~g~YsS 714 (758)
T PLN02355 636 VVYLPKDASLPVTLKSREYEVFTVVPVKELSNGVKFAPIGLVKMFNSGGAIKELRYDED-TNATVRMKVRGSGLVGAYSS 714 (758)
T ss_pred EEecCCCCceEEEecCCceEEEEEeeEEEecCCcEEEEeehhhhccCcceEEEEEeecc-cccEEEEEEEecceEEEEec
Confidence 99998899999999999999999999999988899999999999999999999998753 56789999999999999999
Q ss_pred CCCceEEecCeeeeeEEeCCCceEEEEcC--C-CCceeeeeEeC
Q 005843 634 TKPSSILLNSKNEEFKFSAEDNLLTVTIP--P-TTSSWDITLCY 674 (674)
Q Consensus 634 ~~P~~~~vdg~~~~f~yd~~~gll~v~lp--~-~~~~~~v~i~~ 674 (674)
.+|++|.|||++++|+|+++||+++|+|| + ++++|.|||+|
T Consensus 715 ~~P~~c~vd~~~~~f~y~~~~g~~~~~~~~~~~~~~~~~~~~~~ 758 (758)
T PLN02355 715 SRPRRVTVDSKEVEFRYEEGSGLVTFDLGVPEEELYLWNVTVEL 758 (758)
T ss_pred CCCcEEEECCeEeeeEEcCCCCeEEEEcCCCcccCceeEEEEeC
Confidence 99999999999999999999999999994 4 78999999986
No 4
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=5.7e-178 Score=1474.69 Aligned_cols=657 Identities=39% Similarity=0.734 Sum_probs=622.6
Q ss_pred CCCcccCCCCCCCcceeeeeEeecCCCCCCCCCCCCceEEEEEEeecCceEEEEecCCCCeEEEEEecCCCccccccCce
Q 005843 1 MIPRMGNSASDIPIETQMLLLEASEKEKGPTSDDASTSYILFLPVLDGEFRSSLQGNSSNELEFCIESGNPDIVTSESLR 80 (674)
Q Consensus 1 ~~~~~g~~~~~~p~~tq~~l~e~~~~~~~~~~~~~~~~y~v~L~~s~g~f~a~l~~~~~~~~~l~~~sg~~~~~~~~~~~ 80 (674)
||||||++|+|||.||||||+|.+++ ..|+|+||+++|.||++||++.++++.||+|||++.+.+++...
T Consensus 112 mt~~vG~~G~Dip~ETQ~llle~~~~----------~~Yvv~lP~ieG~FRa~Lqg~~~~~~~ic~ESg~~~V~~s~~~~ 181 (865)
T PLN02982 112 STMWIGSSGSDLQMETQWVLLKVPEI----------DSYVLIIPLIEGSFRSALHPGEDGHVMICAESGSTKVKASSFNS 181 (865)
T ss_pred cchhhcCCCCCCChhheEEEEEcCCC----------ceEEEEEEecCCceEEEecCCCCCCEEEEEecCCccccccccce
Confidence 89999999999999999999999964 36999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEe
Q 005843 81 AVFVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIID 160 (674)
Q Consensus 81 ~v~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viID 160 (674)
.++|++|+|||++|++|++++|.|++||+++++|++|.++|+||||||||||.+|++++|++++++|+++|+|+++||||
T Consensus 182 ~~yvh~g~nPy~li~~a~~~v~~hl~TF~~~eeK~~P~~vd~FGWCTWDAFY~~V~p~GV~~Gv~~l~~gG~pprfvIID 261 (865)
T PLN02982 182 IAYVHVSDNPYNLMKEAYSALRVHLNTFRLLEEKALPKIVDKFGWCTWDAFYLTVDPVGVWHGVKEFAEGGVPPRFLIID 261 (865)
T ss_pred EEEEecCCCHHHHHHHHHHHHHHHhcccchhhhccCccccccceEEeechhhcccCHHHHHHHHHHHhcCCCCccEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCc----CCCCCCccccccCCcccCccccCCCCCCCC-----------------------------------
Q 005843 161 DGWQDTTNEFQ----IEGEPFAEGTQFGGRLASIKENNKFRGTTG----------------------------------- 201 (674)
Q Consensus 161 DGWq~~~~d~~----~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~----------------------------------- 201 (674)
||||+...|.+ +.++...+|.||..||+.|++|.||+.+++
T Consensus 262 DGWQsi~~d~~~~~~~~~~~~~~g~q~~~RL~~~~En~KFrky~~~~~~~~~~~~f~~~~~~~~i~~~~~~~~a~~~~~~ 341 (865)
T PLN02982 262 DGWQSINFDGDNPNEDAKNLVLGGTQMTARLYRFDECEKFRNYKGGSMLGPDPPHFDPKKPKMLIYKAIEREHAEKARKK 341 (865)
T ss_pred cchhhccccccCCchhhhhccccccchhhhhhcchhhhhhhccccccccCCCcccccccccchhhhcccchhhhhhcccc
Confidence 99999987632 235677899999999999999999996321
Q ss_pred ------------------------------------------CCCcCCCChHHHHHHHHHhC-CCcEEEEEeeccCccCC
Q 005843 202 ------------------------------------------DDQKETSGLKDFVLDIKKNF-CLKYVYVWHALMGYWGG 238 (674)
Q Consensus 202 ------------------------------------------~~~~~~~GL~~lv~~I~~~~-Glk~vgvWha~~GyWgG 238 (674)
+++..+.|||++|+.||+++ ||||||||||++|||||
T Consensus 342 ~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Glk~~v~~ik~k~~~vk~VyVWHAL~GYWGG 421 (865)
T PLN02982 342 AIESGVTDLSEFDAKIKQLKKELDAMFDGEEKSVSSESESSGSCKVSGSGMKAFTRDLRTKFKGLDDIYVWHALCGAWGG 421 (865)
T ss_pred cccccccccchhhhhhhhhhhhccccccccccccccccccccccccCcccHHHHHHHHHHhCCCCCEEEEeeeccCcccC
Confidence 12345679999999999999 59999999999999999
Q ss_pred cccCCcCcccccCcccccCCCCCCcccCCccccccccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhh
Q 005843 239 LVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILET 318 (674)
Q Consensus 239 I~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~ 318 (674)
|+|++ ++|++++++|+.+||+..++||+++++ +..+|+++++|+++++||++||+||+++|||+||||+|+.+++
T Consensus 422 V~P~~---~~y~~k~~~p~~spg~~~~~~d~a~d~--i~~~G~glv~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~ 496 (865)
T PLN02982 422 VRPGT---THLNAKVVPARLSPGLDGTMNDLAVDK--IVEGGIGLVHPSQAGDFYDSMHSYLASVGITGVKVDVIHTLEY 496 (865)
T ss_pred cCCCC---CCCcceEEecccCccccccCcchhhhh--eecCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhHHH
Confidence 99987 589999999999999999999999999 8889999999999999999999999999999999999999999
Q ss_pred hcCCCCCchhHHHHHHHHHHHHHHhhCCCCceEEeecCCCCccc-cccccceEecCCccCCCCCChhhH--------HHH
Q 005843 319 ICSGLGSRVSLTRHFQQALEESIATNFKDNSIICCMAQNTDSIF-HSKRSAITRASDDYYPKNPTTQTL--------HIA 389 (674)
Q Consensus 319 ~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~~~~~l~-~~~~~~~~R~SdDf~p~~~~~~~~--------hi~ 389 (674)
+++++++|++++++||+||++|+++||+++++|+||||+++++| +.+...+.|+||||||++|++|+| |++
T Consensus 497 L~~~~ggRv~La~ay~~al~~Sv~r~F~~ng~I~CM~~~~~~~~~~tk~sav~R~SDDF~p~dP~shp~g~~wlq~~Hi~ 576 (865)
T PLN02982 497 VCEEYGGRVELAKAYYDGLSESLAKNFNGTGIIASMQQCNDFFFLGTKQISMGRVGDDFWFQDPNGDPMGVYWLQGVHMI 576 (865)
T ss_pred hhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCCcceeeeccccccCCCCCcCccccccccceeee
Confidence 99899999999999999999999999999999999999999888 568889999999999999999884 999
Q ss_pred HHHhhhhhcCCCcCCCCccCcccchhHHHHHHHHHHcCCceEeecCCCCCcHHHHHHhhccCCceeeeCCCCCCCccccc
Q 005843 390 AVAFNSIFLGEVVVPDWDMFYSQHCAAEFHAVARAVGGCGVYVSDKPGKHDFKILKRLVLADGSVLRAKYPGRPSRDCLF 469 (674)
Q Consensus 390 ~na~nsl~~g~~~~pD~DMf~s~h~~a~~Haa~raisggPvyisD~pg~hd~~lL~~lv~pdG~vlr~~~~g~pt~d~lf 469 (674)
+||||+||+|+++|||||||||.|++|++||++||||||||||||+||+||++||++|++|||+||||+.||+|||||||
T Consensus 577 ~~AyNSLl~G~~v~PDWDMFqS~H~~A~fHAaaRAIsGGPIYvSD~pG~Hdf~lLk~LvlpDG~IlR~~~pg~PTrDcLF 656 (865)
T PLN02982 577 HCAYNSMWMGQIIQPDWDMFQSDHLCAEFHAGSRAICGGPVYVSDSVGGHDFDLLKKLVFPDGTIPRCQHYALPTRDCLF 656 (865)
T ss_pred ehhhhhHhhccccccCchhccccCchHHHHHHHHhhcCCCEEEeeCCCCccHHHHHhhhcCCCceeccCCCCCCCcchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCcceEEEEeeccCceEEEEeecCCCCCCCccccccccccccccceeeeecCCccchhh--hhcCCCCCCcEEEE
Q 005843 470 NDPVMDGKSLLKIWNLNKCTGVIGVFNCQGAGSWPCTEKESSVQENVDSVISGKVSPADVEYLE--EVSGKQWTGDCAVF 547 (674)
Q Consensus 470 ~dp~~~~~~~Lki~~~~~~~~vvg~FN~~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~~a~~~~~~~~~vy 547 (674)
.||++|++++|||||+|+.+||||+|||||++ |+++++++.+++.++.++|+.|+++||++.. +.++.+|+++++||
T Consensus 657 ~DPl~DGks~LKIWN~Nk~~GViG~FNCQGag-W~~~~~~~~~~~~~~~~vtg~v~~~Dve~~~~~~~a~~~~~~~~~vY 735 (865)
T PLN02982 657 KNPLFDKKTILKIWNFNKFGGVIGAFNCQGAG-WDPKEHRIKGYSECYKPVSGSVHVSDIEWDQKPEASQMGEAEEYAVY 735 (865)
T ss_pred cCcccCCceEEEEEeccCcCceEEEEEeccCC-CCchhccccccCCCCcceEEEEcHHHcccccccccccCCCcccEEEE
Confidence 99999999999999999999999999999998 9999999999999999999999999999885 45666799999999
Q ss_pred EecCCeEEeccC-CCeEEEEeecCceEEEEEeeeeeeccceeEEEeeccccccCCcceeEEeeeecCCccEEEEEEeecc
Q 005843 548 SFNTGSLFRLAK-AESFGIALKVMQCDVFTVSPIKVYNQKIQFAPIGLTNMYNSGGAVESVDLTNDASSCKIHIKGRGGG 626 (674)
Q Consensus 548 ~~~~g~~~~~~~-~~~~~v~L~~~~~ei~t~~pv~~~~~~~~~A~lGL~~k~~~~aAV~~~~~~~~~~~~~v~v~lkg~G 626 (674)
+++++++.++.+ ++.++|+|++++|||||++||+.+.++++||||||+||||+||||+++++..++++.+++|+|||+|
T Consensus 736 ~~~~~el~~~~~~~~~~~vtL~~~e~elftv~PI~~~~~~i~FApIGL~nM~NSgGAV~~~~~~~~g~~~~v~v~VrG~G 815 (865)
T PLN02982 736 LNQAEELLLMTPKSEAIQITLQPSSFELFSFVPVTKLGSSAKFAPIGLTNMFNSGGTIQEMEYGESGGECSVKVKVKGGG 815 (865)
T ss_pred EecCceEEEecCCCCcceEEeccceeEEEEEeeeEEccCCcceeeeehHhhccCCceeEEeeeccCCccceEEEEEEecc
Confidence 999999998655 7999999999999999999999998889999999999999999999999864334567999999999
Q ss_pred eeeEeecCCCceEEecCeeeeeEEeCCCceEEEEcC--C-CCceeeeeEeC
Q 005843 627 SFGAYSSTKPSSILLNSKNEEFKFSAEDNLLTVTIP--P-TTSSWDITLCY 674 (674)
Q Consensus 627 ~~g~Yss~~P~~~~vdg~~~~f~yd~~~gll~v~lp--~-~~~~~~v~i~~ 674 (674)
+|++|||.+|++|.|||++++|+|+++ |+|+|+|| + ++++|+|+|+|
T Consensus 816 ~f~~Yss~~P~~c~vdg~ev~F~y~~~-g~l~~~lp~~~~~~~~~~v~~~~ 865 (865)
T PLN02982 816 RFLAYSSEAPKKCYLNGKEVGFEWEEE-GKLSFFVPWTEESGGISDVSFIF 865 (865)
T ss_pred eEEEEecCCCeEEEECCeEeeeEECCC-CeEEEEccCCcccCceeeEEEeC
Confidence 999999999999999999999999998 99999995 3 78999999987
No 5
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=100.00 E-value=1.2e-175 Score=1461.86 Aligned_cols=656 Identities=40% Similarity=0.755 Sum_probs=615.1
Q ss_pred CCCcccCCCCCCCcceeeeeEeecCCCCCCCCCCCCceEEEEEEeecCceEEEEecCCCCeEEEEEecCCCccccccCce
Q 005843 1 MIPRMGNSASDIPIETQMLLLEASEKEKGPTSDDASTSYILFLPVLDGEFRSSLQGNSSNELEFCIESGNPDIVTSESLR 80 (674)
Q Consensus 1 ~~~~~g~~~~~~p~~tq~~l~e~~~~~~~~~~~~~~~~y~v~L~~s~g~f~a~l~~~~~~~~~l~~~sg~~~~~~~~~~~ 80 (674)
||||||++|+|||.||||||+|.+++ +..|+|+||+++|.||++||++.++++.||+|||+..+..+++..
T Consensus 102 mt~~~G~~g~dip~eTQ~ll~e~~~~---------~~~y~~~lP~~eg~fRa~Lq~~~~d~~~ic~esg~~~v~~~~~~~ 172 (777)
T PLN02711 102 TTHWVGSNGRDVENETQMMILDKSDS---------GRPYVLLLPLIEGPFRASLQPGEDDNVDICVESGSTKVCGSEFRS 172 (777)
T ss_pred cchhhcCCCCCCChhheEEEEEccCC---------CceEEEEEeecCCceEEEecCCCCCcEEEEEecCCcceeccccce
Confidence 89999999999999999999999852 247999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEe
Q 005843 81 AVFVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIID 160 (674)
Q Consensus 81 ~v~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viID 160 (674)
+++|++|+|||++|++|++++++|+++|++|++|++|.++|+||||||||||++|||++|++++++|+++|+|+++||||
T Consensus 173 ~~~i~~g~~Py~~i~~A~~~~~~~l~tf~~reeK~~P~~~D~fGWCTWdAfy~~Vt~egI~~gl~~L~~~Gip~~~vIID 252 (777)
T PLN02711 173 VLYMHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLTVHPQGVWEGVKGLVDGGCPPGLVLID 252 (777)
T ss_pred EEEEEcCCCHHHHHHHHHHHHHHHhcccchhhhccCCcccccceEEehhHhcccCCHHHHHHHHHHHHhCCCCccEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCc-----CCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCChHHHHHHHHHhCC-CcEEEEEeeccC
Q 005843 161 DGWQDTTNEFQ-----IEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSGLKDFVLDIKKNFC-LKYVYVWHALMG 234 (674)
Q Consensus 161 DGWq~~~~d~~-----~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~GL~~lv~~I~~~~G-lk~vgvWha~~G 234 (674)
||||+.+++.+ +.++...+|+||.+||++|++|.||++..+.+.++|.|||++|+.||++++ |||||||||++|
T Consensus 253 DGWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f~en~KF~~~~~~~~~~p~Glk~~v~~iK~~~~~vk~VyVWHAL~G 332 (777)
T PLN02711 253 DGWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRDYVSPKSLSNKGMGAFIRDLKEEFKTVDYVYVWHALCG 332 (777)
T ss_pred CCcccccccCcccccccccccccccchhhhhhccccccccccccccccCCCCCcHHHHHHHHHhhCCCCCEEEEeeeccC
Confidence 99999876532 235667788999999999999999996433356788999999999999985 999999999999
Q ss_pred ccCCcccCCcCcccccCcccccCCCCCCcccCCccccccccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 235 YWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 235 yWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
|||||+|++++++ +.++++|+.+||+..++||+++++ +..+|+++++|+++++||++||+||+++|||+||||+|+
T Consensus 333 YWGGv~P~~~~~~--~~~~~~p~~spg~~~~~~d~~~d~--~~~~g~glv~Pe~~~~FY~~~hs~Las~GVDgVKVDvQ~ 408 (777)
T PLN02711 333 YWGGLRPNVPGLP--ESKVVAPKLSPGLKMTMEDLAVDK--IVNNGVGLVPPELAYQMYEGLHSHLQSVGIDGVKVDVIH 408 (777)
T ss_pred cccCcCCCCCCCc--cceeeccccCcccccccccccccc--cccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEchhh
Confidence 9999999987755 566889999999999999999998 888899999999999999999999999999999999999
Q ss_pred chhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCCceEEeecCCCCcccc-ccccceEecCCccCCCCCChhh--------
Q 005843 315 ILETICSGLGSRVSLTRHFQQALEESIATNFKDNSIICCMAQNTDSIFH-SKRSAITRASDDYYPKNPTTQT-------- 385 (674)
Q Consensus 315 ~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~~~~~l~~-~~~~~~~R~SdDf~p~~~~~~~-------- 385 (674)
.++++++++++|++++++|++||++|++|||+++++|+||||+++++|+ .+..++.|+||||||++|++|+
T Consensus 409 ~Le~l~~~~Ggrv~la~ay~~ALe~S~~r~F~~ng~I~CMs~~~d~~~~~tk~~av~R~SDDF~p~dP~sh~~g~~W~~~ 488 (777)
T PLN02711 409 LLEMLCEEYGGRVELAKAYYKALTASVRKHFNGNGVIASMEHCNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTFWLQG 488 (777)
T ss_pred hHhhhcccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCchhhhccCcccceeeecccccCCCCcccccccccccc
Confidence 9999998889999999999999999999999999999999999998875 5788999999999999999998
Q ss_pred HHHHHHHhhhhhcCCCcCCCCccCcccchhHHHHHHHHHHcCCceEeecCCCCCcHHHHHHhhccCCceeeeCCCCCCCc
Q 005843 386 LHIAAVAFNSIFLGEVVVPDWDMFYSQHCAAEFHAVARAVGGCGVYVSDKPGKHDFKILKRLVLADGSVLRAKYPGRPSR 465 (674)
Q Consensus 386 ~hi~~na~nsl~~g~~~~pD~DMf~s~h~~a~~Haa~raisggPvyisD~pg~hd~~lL~~lv~pdG~vlr~~~~g~pt~ 465 (674)
.|+++|||||||+|+++|||||||||.|++|++||++||||||||||||+||+||++|||+||+|||+||||++||+|||
T Consensus 489 ~Hi~~~AyNSLllg~~v~PDWDMF~S~Hp~A~~HAaaRAisGGPIYVSD~pG~Hdf~LLk~LvlpdGsIlR~~~pg~Ptr 568 (777)
T PLN02711 489 CHMVHCAYNSLWMGNFIHPDWDMFQSTHPCAEFHAASRAISGGPIYVSDSVGKHNFPLLKRLVLPDGSILRCQYYALPTR 568 (777)
T ss_pred ceeeeehhhhhhhcccccCCchhhhccCchHHHHHHHHhhcCCCEEEecCCCCccHHHHHhhhCCCCcEecccCCCCccc
Confidence 49999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCcceEEEEeeccCceEEEEeecCCCCCCCccccccccccccccceeeeecCCccchhhhhcCC--CCCCc
Q 005843 466 DCLFNDPVMDGKSLLKIWNLNKCTGVIGVFNCQGAGSWPCTEKESSVQENVDSVISGKVSPADVEYLEEVSGK--QWTGD 543 (674)
Q Consensus 466 d~lf~dp~~~~~~~Lki~~~~~~~~vvg~FN~~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~a~~--~~~~~ 543 (674)
||||.||++|++++|||||+|+++||||+|||||++ ||++++++++++.++.++|+.|+++||++..+.++. .-.+.
T Consensus 569 DcLF~DP~~dg~slLKIwn~nk~tGviG~FNcqgag-W~~~~~~~~~~~~~~~~vt~~v~~~Dv~w~~~~~~~~~~~~~~ 647 (777)
T PLN02711 569 DCLFEDPLHDGKTMLKIWNLNKFTGVIGAFNCQGGG-WCRETRRNKCASQFSHTVTAKASPKDIEWNSGKSPISIEGVQV 647 (777)
T ss_pred hhhccccccCCceEEEEEeecCCcceEEEEEecCCc-ccchhhhcccccCCCCceEEEEchHHhcccCCCCCcCccCcee
Confidence 999999999999999999999999999999999998 999999999999999999999999999875443221 12468
Q ss_pred EEEEEecCCeEEeccCCCeEEEEeecCceEEEEEeeeeeecc-ceeEEEeeccccccCCcceeEEeeeecCCccEEEEEE
Q 005843 544 CAVFSFNTGSLFRLAKAESFGIALKVMQCDVFTVSPIKVYNQ-KIQFAPIGLTNMYNSGGAVESVDLTNDASSCKIHIKG 622 (674)
Q Consensus 544 ~~vy~~~~g~~~~~~~~~~~~v~L~~~~~ei~t~~pv~~~~~-~~~~A~lGL~~k~~~~aAV~~~~~~~~~~~~~v~v~l 622 (674)
|+||+|++|++.++++++.++|+|++++|||||++||+.+.+ +++||||||+||||++|||+++++..+++ +++|+|
T Consensus 648 y~vy~~~s~~l~~l~~~~~l~vtL~~~~~Eiftv~Pv~~~~~~~~~fApIGL~~m~nsggAv~~~~~~~~~~--~v~v~v 725 (777)
T PLN02711 648 FAVYLFQSKKLVLSKPSENLEISLEPFNFELITVSPVTTLPGKSIQFAPIGLVNMLNTGGAIQSLAYDDAES--SVQIGV 725 (777)
T ss_pred EEEEEecCCeEEECCCCCceEEEecCcceEEEEEeeeEEecCCCceEEecchhhhccCceeEEEEEeccCCC--eEEEEE
Confidence 999999999999999899999999999999999999999875 48999999999999999999999875333 688999
Q ss_pred eecceeeEeecCCCceEEecCeeeeeEEeCCCceEEEEcCC--CCceeeeeEeC
Q 005843 623 RGGGSFGAYSSTKPSSILLNSKNEEFKFSAEDNLLTVTIPP--TTSSWDITLCY 674 (674)
Q Consensus 623 kg~G~~g~Yss~~P~~~~vdg~~~~f~yd~~~gll~v~lp~--~~~~~~v~i~~ 674 (674)
||+|+||+|+|.+|++|.|||++++|+|++ |+++|+||. +.++|.|||+|
T Consensus 726 kg~G~lg~YsS~~P~~c~v~~~~~~f~y~~--g~~~~~~~~~~~~~~~~v~~~~ 777 (777)
T PLN02711 726 KGSGEMRVFASEKPRSCKIDGEEVEFGYED--CMVVVQVPWSGSSGLSLIEYLF 777 (777)
T ss_pred EeeeEEEEEecCCCeEEEECCEEeeeEecC--CEEEEEecCCCcCCceeEEEeC
Confidence 999999999999999999999999999998 999999964 66999999986
No 6
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=100.00 E-value=4.3e-173 Score=1455.16 Aligned_cols=647 Identities=53% Similarity=0.968 Sum_probs=617.4
Q ss_pred CCCcccCCCCCCCcceeeeeEeecCCCCCCCCCCCCceEEEEEEeecCceEEEEecCCCCeEEEEEecCCCccccccCce
Q 005843 1 MIPRMGNSASDIPIETQMLLLEASEKEKGPTSDDASTSYILFLPVLDGEFRSSLQGNSSNELEFCIESGNPDIVTSESLR 80 (674)
Q Consensus 1 ~~~~~g~~~~~~p~~tq~~l~e~~~~~~~~~~~~~~~~y~v~L~~s~g~f~a~l~~~~~~~~~l~~~sg~~~~~~~~~~~ 80 (674)
||||||++|+|||.||||||+|.+++. ++++.|+|+||+++|.||++||++++++++||+|||++.+..++...
T Consensus 81 m~p~~G~~g~dip~eTQ~ll~e~~~~~------~~~~~Y~vlLPl~eg~FRa~Lqg~~~~~l~i~veSg~~~v~~s~~~~ 154 (747)
T PF05691_consen 81 MTPRMGTSGRDIPMETQFLLLESPDDS------DEGAPYVVLLPLLEGSFRASLQGGEDDELEICVESGDPAVQTSSFDH 154 (747)
T ss_pred cccccCCCcccCChhhheeeeecCccc------CCccceEEEEEEecCceeeeeccCCCCcEEEEEecCCCccccccCce
Confidence 999999999999999999999999532 14568999999999999999999999999999999999999989999
Q ss_pred EEEEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEe
Q 005843 81 AVFVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIID 160 (674)
Q Consensus 81 ~v~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viID 160 (674)
+++|++|+|||++|++|++++++|+++|++|++|++|.++|+||||||||||++||+++|++++++|+++|+|+++||||
T Consensus 155 ~l~v~~g~dPy~~i~~A~~~~~~~l~tf~~r~~K~~P~~~d~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viID 234 (747)
T PF05691_consen 155 ALYVHAGDDPYELIREAVKAVRKHLGTFRLREEKKYPEFLDGLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIID 234 (747)
T ss_pred EEEEeccCCHHHHHHHHHHHHHhcccccccccccchhhhhhhhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCCCc----CCCCCCccccccCCcccCccccCCCCCCCC--CCCcCCCChHHHHHHHHHhC-CCcEEEEEeecc
Q 005843 161 DGWQDTTNEFQ----IEGEPFAEGTQFGGRLASIKENNKFRGTTG--DDQKETSGLKDFVLDIKKNF-CLKYVYVWHALM 233 (674)
Q Consensus 161 DGWq~~~~d~~----~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~--~~~~~~~GL~~lv~~I~~~~-Glk~vgvWha~~ 233 (674)
||||+..++.+ +.++...+|.||.+||.+|++|.||.+... .+++++.||+++|++||+++ ||||||||||++
T Consensus 235 DGWQ~~~~~~~~~~~~~~~~~~~g~q~~~rl~~~~en~kF~~~~~~~~~~~~~~GL~~~V~~ik~~~~~Ik~V~VWHAL~ 314 (747)
T PF05691_consen 235 DGWQSVDNDGDDPSKDGMNLVQEGAQFPRRLTDFKENSKFRAYKSGKSPEAFPSGLKHFVSDIKEKFPGIKYVYVWHALC 314 (747)
T ss_pred cchhcccccCcccccccccccccccccchhhhhhhhhhhhhhccCCCcccCCcccHHHHHHHHHhhCCCCCEEEEeehhc
Confidence 99999988765 334667788999999999999999996443 35678999999999999999 899999999999
Q ss_pred CccCCcccCCcCcccccCcccccCCCCCCcccCCccccccccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccC
Q 005843 234 GYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQ 313 (674)
Q Consensus 234 GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q 313 (674)
||||||+|++. ..|+.++++|..+||+..++||+++++ +..+|+++++|+++++||++||+||+++||||||||+|
T Consensus 315 GYWgGi~P~~~--~~~~~k~~~~~~spg~~~~~~d~~~d~--~~~~g~glv~p~~~~~FYd~~hsyL~s~GVDgVKVD~Q 390 (747)
T PF05691_consen 315 GYWGGISPDGM--LAYNYKLVYPKLSPGLQGNMPDLAVDS--IVKGGLGLVDPEDAFRFYDDFHSYLASAGVDGVKVDVQ 390 (747)
T ss_pred ceecCcCCCCc--cccccceeecccCCcccccCccccccc--cccCcccccCHHHHHHHHHHHHHHHHHcCCCEEEEchh
Confidence 99999999754 578999999999999999999999998 77889999999999999999999999999999999999
Q ss_pred cchhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCCceEEeecCCCCcccc-ccccceEecCCccCCCCCCh--------h
Q 005843 314 NILETICSGLGSRVSLTRHFQQALEESIATNFKDNSIICCMAQNTDSIFH-SKRSAITRASDDYYPKNPTT--------Q 384 (674)
Q Consensus 314 ~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~~~~~l~~-~~~~~~~R~SdDf~p~~~~~--------~ 384 (674)
..+++++.++++|++++++|++||++|+++||+++.+|+||||+++++|+ .+..+++|+||||||++|++ |
T Consensus 391 ~~l~~l~~~~ggrv~la~ay~~AL~~S~~r~F~~~~vI~CMsh~~~~l~~~~~~~av~R~SDDF~P~~p~s~p~g~~w~h 470 (747)
T PF05691_consen 391 AILETLGEGYGGRVELARAYQDALEASVARHFSGNGVINCMSHNPDNLYHSTKQSAVVRNSDDFFPRDPASDPNGVFWLH 470 (747)
T ss_pred hhhhhhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecCCCccchhcccccccceeccccccCCCCCCCccccchhh
Confidence 99999998889999999999999999999999999999999999999999 78889999999999999999 9
Q ss_pred hHHHHHHHhhhhhcCCCcCCCCccCcccchhHHHHHHHHHHcCCceEeecCCCCCcHHHHHHhhccCCceeeeCCCCCCC
Q 005843 385 TLHIAAVAFNSIFLGEVVVPDWDMFYSQHCAAEFHAVARAVGGCGVYVSDKPGKHDFKILKRLVLADGSVLRAKYPGRPS 464 (674)
Q Consensus 385 ~~hi~~na~nsl~~g~~~~pD~DMf~s~h~~a~~Haa~raisggPvyisD~pg~hd~~lL~~lv~pdG~vlr~~~~g~pt 464 (674)
++||++||||+||+|+++|||||||||.|+++++||++||||||||||||+||+||++|||+|++|||+||||+.||+||
T Consensus 471 ~~Hi~~nAyNsL~~g~~~~PDwDMF~S~h~~A~~HAaaRaiSGGPVYiSD~pG~hd~~LLk~LvlpDG~ilR~~~pg~Pt 550 (747)
T PF05691_consen 471 TWHIAHNAYNSLLLGQFVWPDWDMFQSSHPAAEFHAAARAISGGPVYISDKPGKHDFDLLKKLVLPDGSILRADHPGRPT 550 (747)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcccccccCccHHHHHHHHhhcCCCEEEeeCCCCCCHHHHHHhhCCCCceeccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCcceEEEEeeccCceEEEEeecCCCCCCCccccccccccccccceeeeecCCccchhhhhcC--CCCCC
Q 005843 465 RDCLFNDPVMDGKSLLKIWNLNKCTGVIGVFNCQGAGSWPCTEKESSVQENVDSVISGKVSPADVEYLEEVSG--KQWTG 542 (674)
Q Consensus 465 ~d~lf~dp~~~~~~~Lki~~~~~~~~vvg~FN~~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~a~--~~~~~ 542 (674)
|||||.||++|++++|||||+|+.+||||+|||||++ |++++++++++++++.++|+.|+++||+++..+++ .+|++
T Consensus 551 ~d~Lf~dp~~d~~~lLKi~n~n~~~gvig~FN~qgag-w~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~ 629 (747)
T PF05691_consen 551 RDCLFEDPLRDGKSLLKIWNLNKFTGVIGVFNCQGAG-WCREERKNKSHDECPGTLTGSVRPSDVEWISEVAGADDGWNG 629 (747)
T ss_pred hhhhcccCCCCCceeEEEEecCCccceEEEEecCCCc-ccchhhhccccCCCCcceEeeccccccceeccccccCcCCCc
Confidence 9999999999999999999999999999999999998 99999999999999999999999999999988877 67999
Q ss_pred cEEEEEecCCeEEeccC-CCeEEEEeecCceEEEEEeeeeeecc-ceeEEEeeccccccCCcceeEEeeeecCCccEEEE
Q 005843 543 DCAVFSFNTGSLFRLAK-AESFGIALKVMQCDVFTVSPIKVYNQ-KIQFAPIGLTNMYNSGGAVESVDLTNDASSCKIHI 620 (674)
Q Consensus 543 ~~~vy~~~~g~~~~~~~-~~~~~v~L~~~~~ei~t~~pv~~~~~-~~~~A~lGL~~k~~~~aAV~~~~~~~~~~~~~v~v 620 (674)
+|+||+|+++++.++++ ++.++|+|++++|||||++||+.+.+ +++||||||+||||+||||+++++..+ ...|++
T Consensus 630 ~~avY~~~~~~l~~l~~k~~~~~vtL~~~~~El~tv~Pv~~~~~~~v~FAPIGL~nMfNsGGAV~~~~~~~~--~~~v~i 707 (747)
T PF05691_consen 630 DFAVYSHRSGELVLLPPKSESLPVTLKPLEFELFTVSPVKVLGGKGVSFAPIGLVNMFNSGGAVQELEYDDD--EASVKI 707 (747)
T ss_pred cEEEEEcCCCeEEEecCCCCCceEEEcCcceEEEEEeeEEEecCCCeeEehhhHHHhhcCCceeEEEEEecC--ccEEEE
Confidence 99999999999999994 99999999999999999999999887 899999999999999999999999863 468999
Q ss_pred EEeecceeeEeecCCCceEEecCeeeeeEEeCCCceEEEEc
Q 005843 621 KGRGGGSFGAYSSTKPSSILLNSKNEEFKFSAEDNLLTVTI 661 (674)
Q Consensus 621 ~lkg~G~~g~Yss~~P~~~~vdg~~~~f~yd~~~gll~v~l 661 (674)
+|||||+||+|||++|++|.|||++++|+||++ |+|+|+|
T Consensus 708 ~vrG~G~f~aYsS~~P~~c~vdg~ev~F~yd~~-gllt~~v 747 (747)
T PF05691_consen 708 KVRGCGRFGAYSSARPKKCRVDGAEVEFSYDED-GLLTVDV 747 (747)
T ss_pred EEEeccceeEEEecCceEEEECCEEeeEEEcCC-ceEEEeC
Confidence 999999999999999999999999999999998 9999986
No 7
>PLN02229 alpha-galactosidase
Probab=100.00 E-value=6.9e-42 Score=370.84 Aligned_cols=347 Identities=18% Similarity=0.229 Sum_probs=229.7
Q ss_pred cccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCC---ccEEEEecCcccCCCCCcCCCCCCccccccCCcccC
Q 005843 113 TKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTP---AKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLAS 189 (674)
Q Consensus 113 ~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~---~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~ 189 (674)
.+++| |||||||+|+++|||++|+++++.|.+.|+. ++||+||||||...+|. .++
T Consensus 60 a~tPp-----mGWnSWn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~----------------~G~ 118 (427)
T PLN02229 60 ARTPQ-----MGWNSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDS----------------KGQ 118 (427)
T ss_pred cCCCC-----ceEEchhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCC----------------CCC
Confidence 44566 9999999999999999999999998776665 67999999999876653 234
Q ss_pred ccccC-CCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCc
Q 005843 190 IKENN-KFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRD 268 (674)
Q Consensus 190 ~~~n~-KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd 268 (674)
|.+|. ||| +|||+|+++||+ .||| ||||... |+. .|. ..||++.++
T Consensus 119 l~~d~~rFP----------~G~k~ladyiH~-~GlK-fGIy~d~-----G~~---------TC~-----~~pGS~g~e-- 165 (427)
T PLN02229 119 LVPDPKTFP----------SGIKLLADYVHS-KGLK-LGIYSDA-----GVF---------TCQ-----VRPGSLFHE-- 165 (427)
T ss_pred EEEChhhcC----------CcHHHHHHHHHH-CCCc-eEEeccC-----CCc---------ccC-----CCCCCccHH--
Confidence 56765 899 799999999999 7999 7887442 321 111 123443332
Q ss_pred cccccccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCC
Q 005843 269 LSIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIATNFKDN 348 (674)
Q Consensus 269 ~~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~ 348 (674)
.+||+. +++|||||||+|+|+... . ...+...++++||.+ . ||
T Consensus 166 -----------------~~DA~~--------fA~WGVDylK~D~C~~~~-----~-~~~~~y~~m~~AL~~----t--GR 208 (427)
T PLN02229 166 -----------------VDDADI--------FASWGVDYLKYDNCYNLG-----I-KPIERYPPMRDALNA----T--GR 208 (427)
T ss_pred -----------------HHHHHH--------HHHcCCCEEEecCCCCCC-----c-chhHHHHHHHHHHHh----h--CC
Confidence 345554 599999999999997421 1 111223445555554 4 99
Q ss_pred ceEEeecCCCCc---cccccccceEecCCccCCCCCChhhHHHHHHHhhhhhcCCCcCCCCccCcccc-----hhHHHHH
Q 005843 349 SIICCMAQNTDS---IFHSKRSAITRASDDYYPKNPTTQTLHIAAVAFNSIFLGEVVVPDWDMFYSQH-----CAAEFHA 420 (674)
Q Consensus 349 ~ii~cMs~~~~~---l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~na~nsl~~g~~~~pD~DMf~s~h-----~~a~~Ha 420 (674)
+|++|+|+++.. .|..+.+|+||+|+||++.|.+.... +-.+...+.+.++++|||+||+..++ .+.++|+
T Consensus 209 pI~~SlC~WG~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~i-~~~~~~~~~~agPG~wnDpDML~vGn~glT~~E~rthf 287 (427)
T PLN02229 209 SIFYSLCEWGVDDPALWAGKVGNSWRTTDDINDTWASMTTI-ADLNNKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRGHF 287 (427)
T ss_pred CcEEEecCCCCCCHHHHHHhhcCeeeccCCcccccccHHHH-HHHHHHHHhhcCCCCCCCCCeeeeCCCCCCHHHHHHHH
Confidence 999999997642 36667899999999999999875432 22344556678999999999999987 5789999
Q ss_pred HHHHHcCCceEeecCCCCCcHHHHHHhhccCCceeeeCCC--CCCCccccccccCCCCcceEEEEee--ccCceEEEEee
Q 005843 421 VARAVGGCGVYVSDKPGKHDFKILKRLVLADGSVLRAKYP--GRPSRDCLFNDPVMDGKSLLKIWNL--NKCTGVIGVFN 496 (674)
Q Consensus 421 a~raisggPvyisD~pg~hd~~lL~~lv~pdG~vlr~~~~--g~pt~d~lf~dp~~~~~~~Lki~~~--~~~~~vvg~FN 496 (674)
++|||+++||+||....+-+-+.|+-|+.++ |+..++- |++-+ .++.+. .++ -+-||.. ..+..+|++||
T Consensus 288 sLWai~~SPLiiG~DL~~m~~~tl~ILtNkE--VIAINQD~lG~qg~-~v~~~~-~~~--~~~vW~~~L~~g~~aValfN 361 (427)
T PLN02229 288 SIWALMKAPLLIGCDVRNMTAETMEILSNKE--VIAVNQDPLGVQGR-KIQANG-KNG--CQQVWAGPLSGDRLVVALWN 361 (427)
T ss_pred HHHHHHhCceeecCCcccCCHHHHHHhcCHH--HHhhcccccccCcE-EEEecC-CCC--ceEEEEEECCCCCEEEEEEe
Confidence 9999999999999555544444444333322 2222221 11110 011111 111 2456654 34456899999
Q ss_pred cCCCCCCCccccccccccccccceeeeecCCccchhhhhcCCCCCCcEEEEEecCCeEEeccCCCeEEEEeecCceEEEE
Q 005843 497 CQGAGSWPCTEKESSVQENVDSVISGKVSPADVEYLEEVSGKQWTGDCAVFSFNTGSLFRLAKAESFGIALKVMQCDVFT 576 (674)
Q Consensus 497 ~~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~a~~~~~~~~~vy~~~~g~~~~~~~~~~~~v~L~~~~~ei~t 576 (674)
..... .+++ +..+|+.. . + ...|-|++--+++-.-......+.++|.+.+.-+|.
T Consensus 362 ~~~~~----------------~~v~--v~~~~lGl-~---~---~~~~~VrDLW~~~dlg~~~~~~~~~~v~~Hg~~l~r 416 (427)
T PLN02229 362 RCSEP----------------ATIT--ASWDVIGL-E---S---SISVSVRDLWKHKDLSENVVGSFGAQVDAHDCHMYI 416 (427)
T ss_pred CCCCC----------------EEEE--EEHHHcCC-C---C---CCceEEEECCCCCccCccccceEEEEECCCeEEEEE
Confidence 65422 1122 22233221 0 0 123667776665532111256788999999999999
Q ss_pred Eeeeee
Q 005843 577 VSPIKV 582 (674)
Q Consensus 577 ~~pv~~ 582 (674)
+.|+..
T Consensus 417 l~~~~~ 422 (427)
T PLN02229 417 FTPQTV 422 (427)
T ss_pred Eecccc
Confidence 999764
No 8
>PLN02692 alpha-galactosidase
Probab=100.00 E-value=7.9e-42 Score=368.90 Aligned_cols=343 Identities=16% Similarity=0.206 Sum_probs=232.0
Q ss_pred cccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCC---ccEEEEecCcccCCCCCcCCCCCCccccccCCcccC
Q 005843 113 TKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTP---AKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLAS 189 (674)
Q Consensus 113 ~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~---~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~ 189 (674)
..++| |||||||+|+++|+|++|+++++.+.+.|+. ++||+||||||...+|.. ++
T Consensus 53 a~tPp-----mGWnSW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~----------------G~ 111 (412)
T PLN02692 53 GITPP-----MGWNSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEK----------------GN 111 (412)
T ss_pred cCCCc-----ceEEchhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCC----------------CC
Confidence 34567 9999999999999999999999999888775 789999999998877643 23
Q ss_pred cccc-CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCc
Q 005843 190 IKEN-NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRD 268 (674)
Q Consensus 190 ~~~n-~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd 268 (674)
|.++ +||| +|||+++++||+ .||| ||||... |. +.|.- ..|
T Consensus 112 ~~~d~~kFP----------~G~k~ladyiH~-~GLK-fGIy~d~-----G~---------~tC~~----~~p-------- 153 (412)
T PLN02692 112 LVPKKSTFP----------SGIKALADYVHS-KGLK-LGIYSDA-----GY---------FTCSK----TMP-------- 153 (412)
T ss_pred eeeChhhcC----------CcHHHHHHHHHH-CCCc-eEEEecC-----Cc---------cccCC----CCC--------
Confidence 4554 5999 799999999999 7999 7987542 21 11110 012
Q ss_pred cccccccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCC
Q 005843 269 LSIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIATNFKDN 348 (674)
Q Consensus 269 ~~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~ 348 (674)
..+.||+...+.+++|||||||+|+|..- +.. ..+..+++++||.+ . ||
T Consensus 154 -------------------GS~g~e~~DA~~fA~WGvDylK~D~C~~~-----~~~-~~~~y~~m~~AL~~----t--GR 202 (412)
T PLN02692 154 -------------------GSLGHEEQDAKTFASWGIDYLKYDNCNND-----GSK-PTVRYPVMTRALMK----A--GR 202 (412)
T ss_pred -------------------CchHHHHHHHHHHHhcCCCEEeccccCCC-----Ccc-hhHHHHHHHHHHHH----h--CC
Confidence 23466666677789999999999999631 111 11223334445444 4 99
Q ss_pred ceEEeecCCCCc---cccccccceEecCCccCCCCCChhhHHHHHHHhhhhhcCCCcCCCCccCcccc-----hhHHHHH
Q 005843 349 SIICCMAQNTDS---IFHSKRSAITRASDDYYPKNPTTQTLHIAAVAFNSIFLGEVVVPDWDMFYSQH-----CAAEFHA 420 (674)
Q Consensus 349 ~ii~cMs~~~~~---l~~~~~~~~~R~SdDf~p~~~~~~~~hi~~na~nsl~~g~~~~pD~DMf~s~h-----~~a~~Ha 420 (674)
+|++|+|+++.. .|..+.+|+||+|+||++.|...... +-.+...+.++++++|||+||+..++ .+.++|+
T Consensus 203 pI~~SlC~wg~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~~-~~~~~~~~~~agPG~wnDpDML~VGn~glT~~E~rThf 281 (412)
T PLN02692 203 PIFFSLCEWGDMHPALWGSKVGNSWRTTNDISDTWDSMISR-ADMNEVYAELARPGGWNDPDMLEVGNGGMTKDEYIVHF 281 (412)
T ss_pred CeEEEecCCCcCChhhhhhhcCCccccccccccchHhHHHH-HHHHHHHhhccCCCCCCCCCeEeECCCCCCHHHHHHHH
Confidence 999999998752 36678899999999999999864443 33455666788999999999999987 4789999
Q ss_pred HHHHHcCCceEeecCCCCCcHHHHHHhhccCCceeeeCCC--CCCCccccccccCCCCcceEEEEee--ccCceEEEEee
Q 005843 421 VARAVGGCGVYVSDKPGKHDFKILKRLVLADGSVLRAKYP--GRPSRDCLFNDPVMDGKSLLKIWNL--NKCTGVIGVFN 496 (674)
Q Consensus 421 a~raisggPvyisD~pg~hd~~lL~~lv~pdG~vlr~~~~--g~pt~d~lf~dp~~~~~~~Lki~~~--~~~~~vvg~FN 496 (674)
++|||+++||+||....+-+-+.|+-|+.++ |+..++- |.+-+- ++ .++. +-||.. ..+..+|++||
T Consensus 282 sLWai~~SPLiiG~DL~~~~~~~l~iLtN~e--vIAiNQD~lG~q~~~-v~----~~~~--~~vW~k~l~~g~~aVal~N 352 (412)
T PLN02692 282 SIWAISKAPLLLGCDVRNMTKETMDIVANKE--VIAVNQDPLGVQAKK-VR----MEGD--LEIWAGPLSGYRVALLLLN 352 (412)
T ss_pred HHHHHHhCcceecCCcccCCHHHHHHhcCHH--HhhhccCccccCcEE-EE----ecCC--eEEEEEECCCCCEEEEEEE
Confidence 9999999999999555555544444444333 3333322 222110 11 1222 355554 34456899999
Q ss_pred cCCCCCCCccccccccccccccceeeeecCCccchhhhhcCCCCCCcEEEEEecCCeEEeccCCCeEEEEeecCceEEEE
Q 005843 497 CQGAGSWPCTEKESSVQENVDSVISGKVSPADVEYLEEVSGKQWTGDCAVFSFNTGSLFRLAKAESFGIALKVMQCDVFT 576 (674)
Q Consensus 497 ~~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~a~~~~~~~~~vy~~~~g~~~~~~~~~~~~v~L~~~~~ei~t 576 (674)
.+... .+++ +..+|+.. .+ ...+-|++--+++-........++++|.+.+.-+|.
T Consensus 353 ~~~~~----------------~~i~--~~~~~lgl----~~---~~~~~vrDLW~~~~~g~~~~~~~~~~v~~Hg~~l~r 407 (412)
T PLN02692 353 RGPWR----------------NSIT--ANWDDIGI----PA---NSIVEARDLWEHKTLKQHFVGNLTATVDSHACKMYI 407 (412)
T ss_pred CCCCC----------------EEEE--EeHHHhCC----CC---CCceEEEECCCCCccCccccceEEEEECCceEEEEE
Confidence 65422 1111 22223221 00 124667766665532212356788999999999999
Q ss_pred Eeee
Q 005843 577 VSPI 580 (674)
Q Consensus 577 ~~pv 580 (674)
+.|+
T Consensus 408 l~~~ 411 (412)
T PLN02692 408 LKPI 411 (412)
T ss_pred EecC
Confidence 8885
No 9
>PLN02808 alpha-galactosidase
Probab=100.00 E-value=8.3e-41 Score=360.25 Aligned_cols=340 Identities=16% Similarity=0.212 Sum_probs=227.2
Q ss_pred cccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCC---ccEEEEecCcccCCCCCcCCCCCCccccccCCcccC
Q 005843 113 TKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTP---AKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLAS 189 (674)
Q Consensus 113 ~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~---~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~ 189 (674)
.+++| |||||||+|+++|||++|++.++.|++.|+. ++||+||||||...+|.. ++
T Consensus 29 a~tPp-----mGWnsW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~----------------G~ 87 (386)
T PLN02808 29 GLTPQ-----MGWNSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQ----------------GN 87 (386)
T ss_pred cCCCc-----ceEEchHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCC----------------CC
Confidence 34567 9999999999999999999999999888876 789999999998766542 23
Q ss_pred cccc-CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCc
Q 005843 190 IKEN-NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRD 268 (674)
Q Consensus 190 ~~~n-~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd 268 (674)
+.+| .||| +||++|+++||+ .||| ||||... |. .++.. ..||
T Consensus 88 ~~~d~~rFP----------~G~~~lad~iH~-~Glk-fGiy~~~-----G~----------~tC~~---~~pG------- 130 (386)
T PLN02808 88 LVPKASTFP----------SGIKALADYVHS-KGLK-LGIYSDA-----GT----------LTCSK---TMPG------- 130 (386)
T ss_pred EeeChhhcC----------ccHHHHHHHHHH-CCCc-eEEEecC-----Cc----------cccCC---CCCc-------
Confidence 4666 4999 799999999999 7999 7988542 21 11100 0122
Q ss_pred cccccccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCC
Q 005843 269 LSIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIATNFKDN 348 (674)
Q Consensus 269 ~~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~ 348 (674)
.+.||+...+.+++|||||||+|+|..- +. . .+.-+.+|.+++++. ||
T Consensus 131 --------------------s~~~e~~DA~~fA~WGvDylK~D~C~~~-----~~-~----~~~~y~~m~~AL~~t--GR 178 (386)
T PLN02808 131 --------------------SLGHEEQDAKTFASWGIDYLKYDNCENT-----GT-S----PQERYPKMSKALLNS--GR 178 (386)
T ss_pred --------------------chHHHHHHHHHHHHhCCCEEeecCcCCC-----Cc-c----HHHHHHHHHHHHHHh--CC
Confidence 3455666666779999999999998631 11 1 122334445545444 99
Q ss_pred ceEEeecCCCC-cc--ccccccceEecCCccCCCCCChhhHHHHHHHhhhhhcCCCcCCCCccCcccc-----hhHHHHH
Q 005843 349 SIICCMAQNTD-SI--FHSKRSAITRASDDYYPKNPTTQTLHIAAVAFNSIFLGEVVVPDWDMFYSQH-----CAAEFHA 420 (674)
Q Consensus 349 ~ii~cMs~~~~-~l--~~~~~~~~~R~SdDf~p~~~~~~~~hi~~na~nsl~~g~~~~pD~DMf~s~h-----~~a~~Ha 420 (674)
+|++|+|+++. .. |..+.+|+||+|+|+++.|...... +-.++..+.++++++|||+||+..++ .+.++|+
T Consensus 179 pi~~slc~wg~~~p~~w~~~~~n~WR~s~Di~d~W~~v~~~-~~~~~~~~~~agPG~wnDpDML~vGn~glt~~E~rthf 257 (386)
T PLN02808 179 PIFFSLCEWGQEDPATWAGDIGNSWRTTGDIQDNWDSMTSR-ADQNDRWASYARPGGWNDPDMLEVGNGGMTTEEYRSHF 257 (386)
T ss_pred CeEEEecCCCCCCHHHHHHhhcCcccccCCcccchhhHHHH-HHhhhhhHhhcCCCCCCCCCeeeECCCCCCHHHHHHHH
Confidence 99999999763 22 5567899999999999999864442 33455556678999999999999986 5789999
Q ss_pred HHHHHcCCceEeecCCCCCcHHHHHHhhccCCceeeeCCC--CCCCccccccccCCCCcceEEEEee--ccCceEEEEee
Q 005843 421 VARAVGGCGVYVSDKPGKHDFKILKRLVLADGSVLRAKYP--GRPSRDCLFNDPVMDGKSLLKIWNL--NKCTGVIGVFN 496 (674)
Q Consensus 421 a~raisggPvyisD~pg~hd~~lL~~lv~pdG~vlr~~~~--g~pt~d~lf~dp~~~~~~~Lki~~~--~~~~~vvg~FN 496 (674)
++|||+++||+||+.+.+-+-+.|.-|..++ ||..++- |.+-+ .++ .++. +-||.. ..+...|++||
T Consensus 258 sLWam~~SPLiiG~DL~~~~~~~l~iLtNke--vIAINQD~lG~~~~-~v~----~~~~--~~vW~k~L~~g~~aVal~N 328 (386)
T PLN02808 258 SIWALAKAPLLIGCDIRSMDNETFELLSNKE--VIAVNQDKLGVQGK-KVK----KDGD--LEVWAGPLSKKRVAVVLWN 328 (386)
T ss_pred HHHHHHhCcceecCCcCcCCHHHHHHhcCHH--HHhhcCCccccCcE-EEE----ecCC--eEEEEEECCCCCEEEEEEE
Confidence 9999999999999665554433333332222 2222111 22211 011 1222 345543 45567899999
Q ss_pred cCCCCCCCccccccccccccccceeeeecCCccchhhhhcCCCCCCcEEEEEecCCeE-EeccCCCeEEEEeecCceEEE
Q 005843 497 CQGAGSWPCTEKESSVQENVDSVISGKVSPADVEYLEEVSGKQWTGDCAVFSFNTGSL-FRLAKAESFGIALKVMQCDVF 575 (674)
Q Consensus 497 ~~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~a~~~~~~~~~vy~~~~g~~-~~~~~~~~~~v~L~~~~~ei~ 575 (674)
.+... .+++ +..+|+.. .+ .+.|-|++--+++- ... ...++++|.+.+.-+|
T Consensus 329 ~~~~~----------------~~~~--~~~~~lgl----~~---~~~~~vrDlWs~~~~g~~--~~~~~~~v~pHg~~~~ 381 (386)
T PLN02808 329 RGSSR----------------ATIT--ARWSDIGL----NS---SAVVNARDLWAHSTQSSV--KGQLSALVESHACKMY 381 (386)
T ss_pred CCCCC----------------EEEE--EEHHHhCC----CC---CCceEEEECCCCCccCcc--cceEEEEECCceEEEE
Confidence 66422 1222 22233321 00 13466776666543 222 3567899999999999
Q ss_pred EEee
Q 005843 576 TVSP 579 (674)
Q Consensus 576 t~~p 579 (674)
.+.|
T Consensus 382 rlt~ 385 (386)
T PLN02808 382 VLTP 385 (386)
T ss_pred EEeC
Confidence 8876
No 10
>PLN03231 putative alpha-galactosidase; Provisional
Probab=100.00 E-value=4.4e-39 Score=343.30 Aligned_cols=301 Identities=14% Similarity=0.181 Sum_probs=194.8
Q ss_pred cccccccccccccCHHHHHHHHHHHHhCCCC---ccEEEEecCcccCCCCCcCCCCCCccccccCCcccCcccc-CCCCC
Q 005843 123 FGWCTWDAFYQEVNPQGIKDGLKSLSEGGTP---AKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKEN-NKFRG 198 (674)
Q Consensus 123 ~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~---~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n-~KFp~ 198 (674)
|||||||+|+++|||+.|+++++ +.+.|+. ++||+|||||+...+...........+.......+.+.++ +|||+
T Consensus 3 MGWNSWn~f~~~i~E~~i~~~Ad-~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~~~~~~~~~~~~~d~~G~l~pd~~rFPs 81 (357)
T PLN03231 3 RGWNSYDSFSFTISEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWFKTSAKSPGYDLIDKWGRPLPDPKRWPS 81 (357)
T ss_pred CCccchhccCcCcCHHHHHHHHH-HHHcchHHhCCEEEEECCcccccccccccccccccccccccCCCCCcccCcccCCC
Confidence 99999999999999999999999 6666764 6799999999976421100000000000001112344565 58995
Q ss_pred CCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCccccc-CCCCCCcccC---Ccccccc-
Q 005843 199 TTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYP-VQSPGNLANM---RDLSIDC- 273 (674)
Q Consensus 199 ~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p-~~~~g~~~~~---pd~~~~~- 273 (674)
++ .++|||+|+++||+ +||| |||. .+. |+..-. ++.. .| ..++|+..++ .|++...
T Consensus 82 ~~-----~~~G~k~lADyvHs-~GLK-fGIY-~~~----G~~tca-----~~~~--~pi~G~~Gs~g~~~~a~Dia~~~~ 142 (357)
T PLN03231 82 TT-----GGKGFAPIAAKVHA-LGLK-LGIH-VMR----GISTTA-----VKKK--TPILGAFKSNGHAWNAKDIALMDQ 142 (357)
T ss_pred Cc-----cccCcHHHHHHHHh-CCcc-eEEE-ecC----Cccchh-----cccC--CccCCCCcccccccchhhhccccc
Confidence 32 23599999999999 7999 7984 333 442211 0111 11 1234554432 3332221
Q ss_pred -cccccc---CcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCCc
Q 005843 274 -MEMEKY---GIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIATNFKDNS 349 (674)
Q Consensus 274 -~~~~~~---g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ 349 (674)
|++... |++ ++...+++||+...+.+++|||||||+|+|..- . ....+...++++||.+ . ||+
T Consensus 143 ~c~~~~~~~~~v~-~~~~gaq~y~~~~a~~fA~WGVDylK~D~c~~~-----~-~~~~~~y~~m~~AL~~----t--GRp 209 (357)
T PLN03231 143 ACPWMQQCFVGVN-TSSEGGKLFIQSLYDQYASWGIDFIKHDCVFGA-----E-NPQLDEILTVSKAIRN----S--GRP 209 (357)
T ss_pred ccccccccccccc-ccchhHHHHHHHHHHHHHHhCCCEEeecccCCC-----C-cccHHHHHHHHHHHHH----h--CCC
Confidence 212112 333 345689999999999999999999999987521 1 1122233445555555 3 999
Q ss_pred eEEeecCCCCcc--cc---ccccceEecCCccCCCCCChhhHHHHHHHhhh-------hhcCCCcCCCCccCcccc----
Q 005843 350 IICCMAQNTDSI--FH---SKRSAITRASDDYYPKNPTTQTLHIAAVAFNS-------IFLGEVVVPDWDMFYSQH---- 413 (674)
Q Consensus 350 ii~cMs~~~~~l--~~---~~~~~~~R~SdDf~p~~~~~~~~hi~~na~ns-------l~~g~~~~pD~DMf~s~h---- 413 (674)
|++|+|++.... |. .+++|+||+|+|+++.|..........+.+.. -+.|+++|||+||+..++
T Consensus 210 Iv~Slc~g~~~~~~~~~~i~~~an~WR~s~DI~d~W~~v~~~~~~~~~~~~~~~~~~~~~agpG~WnD~DML~vG~~g~~ 289 (357)
T PLN03231 210 MIYSLSPGDGATPGLAARVAQLVNMYRVTGDDWDDWKYLVKHFDVARDFAAAGLIAIPSVVGGKSWVDLDMLPFGRLTDP 289 (357)
T ss_pred eEEEecCCCCCCchhhhhhhhhcCcccccCCcccchhhHHHHHHHHHHHhhhcccccccCCCCCCCCCccchhcCCCCCC
Confidence 999999864432 22 35689999999999999875443222222221 156788999999999883
Q ss_pred --------------hhHHHHHHHHHHcCCceEeecCCCCCcHHHHHHhhccCCceeeeC
Q 005843 414 --------------CAAEFHAVARAVGGCGVYVSDKPGKHDFKILKRLVLADGSVLRAK 458 (674)
Q Consensus 414 --------------~~a~~Haa~raisggPvyisD~pg~hd~~lL~~lv~pdG~vlr~~ 458 (674)
.+.++|+++|||+.+||++|-.+.+-+-+.|.-|+.++ ||+..
T Consensus 290 ~~~~g~~~~~glT~~E~rthfslWam~~SPLiiG~DL~~~~~~tl~iLtN~e--vIAIN 346 (357)
T PLN03231 290 AAAYGPYRNSRLSLEEKKTQMTLWAVAKSPLMFGGDLRRLDNETLSLLTNPT--VLEVN 346 (357)
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHhCchhhcCCcccCCHHHHHHhcChH--Hheec
Confidence 37899999999999999999666666666566666655 55554
No 11
>PLN02899 alpha-galactosidase
Probab=100.00 E-value=9.5e-37 Score=338.15 Aligned_cols=302 Identities=15% Similarity=0.155 Sum_probs=187.3
Q ss_pred cccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCC---ccEEEEecCcccCCCCCcCCCCCCccccccCCcccC
Q 005843 113 TKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTP---AKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLAS 189 (674)
Q Consensus 113 ~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~---~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~ 189 (674)
..++| |||||||+|+++|||+.|+++++.+ +.|+. ++||+|||||+...++..+.. ..|.......+.
T Consensus 28 A~TPP-----MGWNSWn~f~~~I~E~~i~~~Ad~v-s~GLk~~GY~YVnIDDcW~~~~~~g~~~~---s~g~~~~D~~Gr 98 (633)
T PLN02899 28 ASFPP-----RGWNSYDSFSWIVSEEEFLQNAEIV-SQRLLPFGYEYVVVDYLWYRKKVEGAYVD---SLGFDVIDEWGR 98 (633)
T ss_pred cCCCC-----CCCcchhhhccCCCHHHHHHHHHHH-HcchHhhCCeEEEEccccccccccccccc---cccccccCCCCC
Confidence 34566 9999999999999999999999965 55664 679999999997643211000 000000011234
Q ss_pred cccc-CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccC-----CcCcccccCcccccCCCCCCc
Q 005843 190 IKEN-NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLN-----SSGTKMYNPEMKYPVQSPGNL 263 (674)
Q Consensus 190 ~~~n-~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~-----~~~~~~y~~~~~~p~~~~g~~ 263 (674)
+.++ +|||+.+ .++|||+|+++||+ +||| ||| |.+. |+..- .++.... +.-.|+.. |.-
T Consensus 99 LvPDp~RFPSs~-----~g~GmK~LADYVHs-kGLK-FGI-Y~~~----Gi~tcA~~~~~PI~gs~-~g~~y~~s--~~~ 163 (633)
T PLN02899 99 PIPDPGRWPSSR-----GGKGFTEVAEKVHA-MGLK-FGI-HVMR----GISTQAVNANTPILDAV-KGGAYEES--GRQ 163 (633)
T ss_pred CccCcccCCCCc-----cCCCcHHHHHHHHh-CCcc-eEE-EecC----CCcccccccCCcccccc-cccccccc--ccc
Confidence 4566 5899532 34699999999999 7999 899 5554 34211 0100000 00000000 000
Q ss_pred ccCCcccccc--ccccccCc-CC-CChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHH
Q 005843 264 ANMRDLSIDC--MEMEKYGI-GA-IDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEE 339 (674)
Q Consensus 264 ~~~pd~~~~~--~~~~~~g~-~l-~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~ 339 (674)
-+..|++... |.+...|. ++ .+++.+++||+.+++.+|+|||||||+|+|.. .. ...+..+++++||++
T Consensus 164 ~~a~DIa~~~~tC~w~~~g~~~vDa~~~~g~a~~~Sla~tfAsWGVDyLKyD~c~~-----~~--~~~~ey~~ms~AL~a 236 (633)
T PLN02899 164 WRAKDIALKERACAWMSHGFMSVNTKLGAGKAFLRSLYDQYAEWGVDFVKHDCVFG-----DD--FDLEEITYVSEVLKE 236 (633)
T ss_pred cchhhccccccccccCCCCcccccccccchhhhhHHHHHHHHHhCCCEEEEcCCCC-----CC--CChHHHHHHHHHHHH
Confidence 1223333222 11111121 12 23457899999999999999999999998752 11 122334556666665
Q ss_pred HHHhhCCCCceEEeecCCCCcc--cc---ccccceEecCCccCCCCCChhhHHHHHHHhhh--hh--cC--CCcCCCCcc
Q 005843 340 SIATNFKDNSIICCMAQNTDSI--FH---SKRSAITRASDDYYPKNPTTQTLHIAAVAFNS--IF--LG--EVVVPDWDM 408 (674)
Q Consensus 340 s~~~~f~g~~ii~cMs~~~~~l--~~---~~~~~~~R~SdDf~p~~~~~~~~hi~~na~ns--l~--~g--~~~~pD~DM 408 (674)
+ ||+|++++|++.... |. .+++|+||+++|+++.|............+.. .. .+ .+.|||+||
T Consensus 237 T------GRPIvySLspG~~~~p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~~~~~~~~~~~g~~G~~gg~WNDpDM 310 (633)
T PLN02899 237 L------DRPIVYSLSPGTSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVSRDFAAAGLIGAKGLRGRSWPDLDM 310 (633)
T ss_pred h------CCCeEEEecCCcccchhhhhhhhccCccceecCCcccchHHHHHHHHHHHHHhhccccccCCCCCCCCCCcce
Confidence 3 999999999865532 22 35689999999999999865432211111221 11 12 248999999
Q ss_pred Ccccc------------------hhHHHHHHHHHHcCCceEeecCCCCCcHHHHHHhhccC
Q 005843 409 FYSQH------------------CAAEFHAVARAVGGCGVYVSDKPGKHDFKILKRLVLAD 451 (674)
Q Consensus 409 f~s~h------------------~~a~~Haa~raisggPvyisD~pg~hd~~lL~~lv~pd 451 (674)
+..+. ++.++|+++|||+.+||++|-.+.+-+-+.|.-|+.++
T Consensus 311 L~VG~lg~~~~n~G~~r~~~LT~dE~rThfSLWAm~aSPLiiG~DLr~md~~tl~ILTNke 371 (633)
T PLN02899 311 LPLGWLTDPGSNVGPHRACNLTLDEQKTQMTLWAMAKSPLMYGGDLRKLDQATYSLITNPT 371 (633)
T ss_pred ecccCCCccccccCccccCCCCHHHHHHHHHHHHHHhCchhhcCCcccCCHHHHHHhcCHH
Confidence 99881 37899999999999999999555555555555555544
No 12
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=99.97 E-value=6.1e-30 Score=278.89 Aligned_cols=245 Identities=18% Similarity=0.268 Sum_probs=165.4
Q ss_pred ccCceEEEEEeCCChHHHH-HHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCc
Q 005843 76 SESLRAVFVNFGDNPFDLV-KESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPA 154 (674)
Q Consensus 76 ~~~~~~v~v~~g~~p~~~i-~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~ 154 (674)
|++|+++++.+..+ ++.+ ++.++++|+++.+... ..+++| +|||||++||+++||++|++.++.+++.|++
T Consensus 2 f~tP~~~~~~s~~g-l~~~s~~~h~~~r~~~~~~~~-~~~~~p-----v~~nsW~~~~~d~~e~~i~~~a~~~~~~G~e- 73 (394)
T PF02065_consen 2 FQTPEAVASYSDQG-LNGMSQRFHRFVRRHLLRPPW-RDKPPP-----VGWNSWEAYYFDITEEKILELADAAAELGYE- 73 (394)
T ss_dssp EE---EEEEEESBH-HHHHHHHHHHHHHHHTSTTTT-TTSS-------EEEESHHHHTTG--HHHHHHHHHHHHHHT-S-
T ss_pred ccCCeEEEEEecCC-HHHHHHHHHHHHHHhcCCCcc-CCCCCc-----eEEEcccccCcCCCHHHHHHHHHHHHHhCCE-
Confidence 67888888888877 5555 6788899999876443 457778 9999999999999999999999999999987
Q ss_pred cEEEEecCcccCCCCCcCCCCCCccccccCCcccCcccc-CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeecc
Q 005843 155 KFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKEN-NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALM 233 (674)
Q Consensus 155 ~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n-~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~ 233 (674)
+|+||||||..++++ ...+++|.++ +||| +||++++++||+ +||| +|||.+|.
T Consensus 74 -~fviDDGW~~~r~~d-------------~~~~GdW~~~~~kFP----------~Gl~~l~~~i~~-~Gmk-~GlW~ePe 127 (394)
T PF02065_consen 74 -YFVIDDGWFGGRDDD-------------NAGLGDWEPDPKKFP----------NGLKPLADYIHS-LGMK-FGLWFEPE 127 (394)
T ss_dssp -EEEE-SSSBCTESTT-------------TSTTSBECBBTTTST----------THHHHHHHHHHH-TT-E-EEEEEETT
T ss_pred -EEEEcCccccccCCC-------------cccCCceeEChhhhC----------CcHHHHHHHHHH-CCCe-EEEEeccc
Confidence 999999999986543 2358899977 4999 799999999999 7999 89999984
Q ss_pred CccCCcccCCcCcccccCcccccCCCCCCcccCCccccccc--cccc--c--CcCCCChHHHHHHHHHHHHHHHhcCCcE
Q 005843 234 GYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCM--EMEK--Y--GIGAIDPDKISQFYDDLHKYLVSQGVDG 307 (674)
Q Consensus 234 GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~--~~~~--~--g~~l~~p~~~~~fy~~~~~~La~~GVD~ 307 (674)
.+.|+|+ .|+.+ |||.+... +... + -+++.+|+..+.+++.+.+.|++|||||
T Consensus 128 ----~v~~~S~---l~~~h--------------Pdw~l~~~~~~~~~~r~~~vLD~~~pev~~~l~~~i~~ll~~~gidY 186 (394)
T PF02065_consen 128 ----MVSPDSD---LYREH--------------PDWVLRDPGRPPTLGRNQYVLDLSNPEVRDYLFEVIDRLLREWGIDY 186 (394)
T ss_dssp ----EEESSSC---HCCSS--------------BGGBTCCTTSE-ECBTTBEEB-TTSHHHHHHHHHHHHHHHHHTT-SE
T ss_pred ----cccchhH---HHHhC--------------ccceeecCCCCCcCcccceEEcCCCHHHHHHHHHHHHHHHHhcCCCE
Confidence 6778775 45543 66654320 0000 1 2677788766666777888999999999
Q ss_pred EEEccCcchhhhcCCCCC--chhHHHHHHHHHHHHHHhhCCCCceEEeecCCCCcccc-ccccceEecCCcc
Q 005843 308 VKVDVQNILETICSGLGS--RVSLTRHFQQALEESIATNFKDNSIICCMAQNTDSIFH-SKRSAITRASDDY 376 (674)
Q Consensus 308 VKvD~q~~l~~~~~~~~~--~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~~~~~l~~-~~~~~~~R~SdDf 376 (674)
||+|++..+...+....+ ..+...++++-+++ +++.||+--|.+|-|.+...=+. ..+....-+||+-
T Consensus 187 iK~D~n~~~~~~~~~~~~~~~~~~~~~~y~l~~~-L~~~~P~v~iE~CssGG~R~D~g~l~~~~~~w~SD~t 257 (394)
T PF02065_consen 187 IKWDFNRDITEAGSPSLPEGYHRYVLGLYRLLDR-LRARFPDVLIENCSSGGGRFDPGMLYYTPQSWTSDNT 257 (394)
T ss_dssp EEEE-TS-TTS-SSTTS-GHHHHHHHHHHHHHHH-HHHHTTTSEEEE-BTTBTTTSHHHHCCSSEEESBST-
T ss_pred EEeccccCCCCCCCCCchHHHHHHHHHHHHHHHH-HHHhCCCcEEEeccCCCCccccchheeccccccCCcc
Confidence 999999876544322211 12334455655555 88899988788898876542221 1344555566643
No 13
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.4e-30 Score=279.89 Aligned_cols=345 Identities=17% Similarity=0.240 Sum_probs=243.6
Q ss_pred CCCCceEEEEEEeecCceEEEEecCCCCeEEEE-----------EecCCCccccccCceEEEEEeCCChHHHHHHHHHHH
Q 005843 33 DDASTSYILFLPVLDGEFRSSLQGNSSNELEFC-----------IESGNPDIVTSESLRAVFVNFGDNPFDLVKESMKIL 101 (674)
Q Consensus 33 ~~~~~~y~v~L~~s~g~f~a~l~~~~~~~~~l~-----------~~sg~~~~~~~~~~~~v~v~~g~~p~~~i~~a~~~~ 101 (674)
++.|++|++-|.+| |+|++-++.++.+..++. ++.++. |+.+++++++++.+.-.+.+.+..++
T Consensus 204 E~~G~V~gf~l~~S-gnf~~f~ev~q~~~~~Vq~g~l~~~~e~~l~~~e~----f~tpe~lv~~edqgl~~lsq~y~~~v 278 (687)
T COG3345 204 EEAGEVYGFGLTYS-GNFAAFVEVHQHPFFRVQDGILPFDGEWFLEEFES----FVTPEVLVVLEDQGLNGLSQKYAELV 278 (687)
T ss_pred hhcceEEEEEEeec-cchhheeeeccCchhhhhhcccccCceEecccccc----cCCceEEEEEcCCCcchHHHHHHHHH
Confidence 44678999999999 999999999877655433 334443 77899999999999444557777889
Q ss_pred HHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCcccc
Q 005843 102 ETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGT 181 (674)
Q Consensus 102 ~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~ 181 (674)
+.++...+ +.+|++| +|||||+|||+++|++.|+++++.+++.|++ +||||||||+.++|+
T Consensus 279 ~~~i~~~~-~~~kprP-----i~~nsWea~Yfd~t~e~ile~vk~akk~gvE--~FvlDDGwfg~rndd----------- 339 (687)
T COG3345 279 RMEIVPRP-RVKKPRP-----IGWNSWEAYYFDFTEEEILENVKEAKKFGVE--LFVLDDGWFGGRNDD----------- 339 (687)
T ss_pred HhhcCccc-ccCCCCc-----ceeeceeeeeecCCHHHHHHHHHHHhhcCeE--EEEEccccccccCcc-----------
Confidence 98876633 4788999 9999999999999999999999999998866 999999999999886
Q ss_pred ccCCcccCccccC-CCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCC
Q 005843 182 QFGGRLASIKENN-KFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSP 260 (674)
Q Consensus 182 ~~~~~L~~~~~n~-KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~ 260 (674)
...|+||-.|+ ||| +|+..+++.|++ .|++ +|||.+|. +|+-+|+ .|+
T Consensus 340 --~~slGDWlv~seKfP----------sgiE~li~~I~e-~Gl~-fGIWlePe----mvs~dSd---lfr---------- 388 (687)
T COG3345 340 --LKSLGDWLVNSEKFP----------SGIEELIEAIAE-NGLI-FGIWLEPE----MVSEDSD---LFR---------- 388 (687)
T ss_pred --hhhhhceecchhhcc----------ccHHHHHHHHHH-cCCc-cceeecch----hcccchH---HHh----------
Confidence 34699999875 999 799999999999 8999 89999985 7877764 344
Q ss_pred CCcccCCccccccc--cccc----cCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCC-chhHHHHH
Q 005843 261 GNLANMRDLSIDCM--EMEK----YGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGS-RVSLTRHF 333 (674)
Q Consensus 261 g~~~~~pd~~~~~~--~~~~----~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~-~~~~~~ay 333 (674)
.||||.+... ++.. .++.+.+|..+...++.+...|-..-|||||||+++.+-.++...-+ -+......
T Consensus 389 ----qHPDWvvk~~G~p~~~~Rnqyvl~~s~p~vv~~l~~~l~qll~~~~v~ylkwdmnr~l~klg~~~~~~l~qqry~l 464 (687)
T COG3345 389 ----QHPDWVVKVNGYPLMAGRNQYVLWLSNPIVVLDLSEDLVQLLLFHLVSYLKWDMNRELFKLGFLFWGALPQQRYQL 464 (687)
T ss_pred ----hCCCeEEecCCccccccccchhhhccChHHHHHhhhHHHHHHHhhhHHHHHHHhCcceeecCCCCCccccchHHHH
Confidence 4599987541 1111 13456789999999999988899999999999999877655432222 11122223
Q ss_pred HHHHHHHHHhhCCCCceEEeecCCCC----------cccccc------ccceEecCCccCCC--C-------CChhhHHH
Q 005843 334 QQALEESIATNFKDNSIICCMAQNTD----------SIFHSK------RSAITRASDDYYPK--N-------PTTQTLHI 388 (674)
Q Consensus 334 ~~Al~~s~~~~f~g~~ii~cMs~~~~----------~l~~~~------~~~~~R~SdDf~p~--~-------~~~~~~hi 388 (674)
++-.+. +..+|+.-.+.+|.+.... .+|.+. .-.+.|.+.+++|- + |.-+...+
T Consensus 465 y~l~~~-l~~k~~~i~FeScasGg~r~d~gml~~~~~~w~Sd~~dAi~r~~iqrg~s~~~P~~~mGaHi~~~p~h~~~rm 543 (687)
T COG3345 465 YRLFDQ-LNLKFPHILFESCASGGERIDKGMLEYSPQLWCSDLTDAIGRLDIQRGGSYTYPPESMGAHISAVPNHQARRM 543 (687)
T ss_pred HHHHHH-hhhcCCCchhhhhcccccccchHHhhhcccccCCCCcchhhhccccccCcccCChHHhhhhccCCCcHHHhhh
Confidence 555555 6668887667788877532 235442 23567999999992 2 22111123
Q ss_pred HHHHhhhhhcCCC-cCCCCccCcccchhH-------HHHHHHHHHcCCceEee-cCCC
Q 005843 389 AAVAFNSIFLGEV-VVPDWDMFYSQHCAA-------EFHAVARAVGGCGVYVS-DKPG 437 (674)
Q Consensus 389 ~~na~nsl~~g~~-~~pD~DMf~s~h~~a-------~~Haa~raisggPvyis-D~pg 437 (674)
..+....+++--+ +-.+.|..+-+..+. .+|-=.|-+.---+.++ |.|+
T Consensus 544 ~~l~~rg~~a~~g~~g~elD~~~lsdeek~~~akqialyke~r~vl~~g~~~rld~pd 601 (687)
T COG3345 544 TSLETRGLVAHFGFWGYELDCTILSDEEKDLTAKQIALYKELRPVLDNGIIYRLDLPD 601 (687)
T ss_pred hhhhhhhHHHHhhhhccCCCcccCCHHHHHHHHHHHHHHHHHHHHHhcccEEeecCCc
Confidence 3344444433222 345777777666432 34444454444334444 6675
No 14
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=99.96 E-value=3.5e-29 Score=261.67 Aligned_cols=343 Identities=19% Similarity=0.247 Sum_probs=221.5
Q ss_pred cccCCCcccccccccccccccccC----------HHHHHHHHHHHHhCCCC---ccEEEEecCcccCCCCCcCCCCCCcc
Q 005843 113 TKQLPGMLDWFGWCTWDAFYQEVN----------PQGIKDGLKSLSEGGTP---AKFLIIDDGWQDTTNEFQIEGEPFAE 179 (674)
Q Consensus 113 ~k~~P~~~~~~GWcTW~a~~~~vt----------e~~i~~~~~~l~~~Gi~---~~~viIDDGWq~~~~d~~~~~~~~~~ 179 (674)
.+.+| |||.+|+.|+++++ |..+++.++.|++.|.. +.||+|||+|-...+|.++
T Consensus 30 g~tP~-----MGw~sW~~f~cniDCv~~pd~cIsE~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~g------- 97 (414)
T KOG2366|consen 30 GRTPQ-----MGWNSWERFRCNIDCVFGPDFCISEQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSDG------- 97 (414)
T ss_pred ccCCC-----cccccccceeeecccccCCccchhHHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCcc-------
Confidence 34567 99999999999888 99999999999998764 7899999999999887542
Q ss_pred ccccCCcccCcccc-CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCC
Q 005843 180 GTQFGGRLASIKEN-NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQ 258 (674)
Q Consensus 180 g~~~~~~L~~~~~n-~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~ 258 (674)
|| .++ ++|| +|++.+++++|. .|+| + ||+.+. + .|.+ .-+
T Consensus 98 ------rL---va~~~rFP----------~Gi~~ladyvHs-~GLK-l-----------GiYsD~-G--~~TC-~g~--- 138 (414)
T KOG2366|consen 98 ------RL---VADPSRFP----------SGIKALADYVHS-KGLK-L-----------GIYSDA-G--NFTC-AGY--- 138 (414)
T ss_pred ------cc---ccChhhcc----------cchhhhhhchhh-cCCc-e-----------eeeecc-C--chhh-ccC---
Confidence 45 344 5799 799999999999 6999 4 566663 2 3333 433
Q ss_pred CCCCcccCCccccccccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHH
Q 005843 259 SPGNLANMRDLSIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALE 338 (674)
Q Consensus 259 ~~g~~~~~pd~~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~ 338 (674)
||++.++ ..||+.| ++|||||+|.|+|...-. ..++.-..+.+||.
T Consensus 139 -PGS~~~e-------------------~~DA~tF--------A~WgvDylKlD~C~~~~~------~~~~~Yp~ms~aLN 184 (414)
T KOG2366|consen 139 -PGSLGHE-------------------ESDAKTF--------ADWGVDYLKLDGCFNNLI------TMPEGYPIMSRALN 184 (414)
T ss_pred -Ccccchh-------------------hhhhhhh--------HhhCCcEEeccccccccc------cccccchhHHHHHh
Confidence 3554443 3467775 999999999999985211 11111222334443
Q ss_pred HHHHhhCCCCceEEeecCCCCc---cc-------cccccceEecCCccCCCCCChhhHHHHH---HHhhhhhcCCCcCCC
Q 005843 339 ESIATNFKDNSIICCMAQNTDS---IF-------HSKRSAITRASDDYYPKNPTTQTLHIAA---VAFNSIFLGEVVVPD 405 (674)
Q Consensus 339 ~s~~~~f~g~~ii~cMs~~~~~---l~-------~~~~~~~~R~SdDf~p~~~~~~~~hi~~---na~nsl~~g~~~~pD 405 (674)
+ . ||+|++++|.++.. .+ -+++.|.||+.||+...|.+.-.+.-+. +-.-..+.|++.|+|
T Consensus 185 ~----t--Grpi~ySlC~W~~~~~~~~~~pny~~i~~~~N~WR~~dDI~dtW~Sv~~I~d~~~~nqd~~~~~agPg~WND 258 (414)
T KOG2366|consen 185 N----T--GRPIFYSLCSWPAYHPGLPHHPNYKNISTICNSWRTTDDIQDTWKSVDSIIDYICWNQDRIAPLAGPGGWND 258 (414)
T ss_pred c----c--CCceEEEeccCcccccCccCCCcchhhhhhhccccchhhhhhHHHHHHHHHHHHhhhhhhhccccCCCCCCC
Confidence 3 3 99999999999863 34 2367899999999999998655443322 222244688999999
Q ss_pred CccCcccc-----hhHHHHHHHHHHcCCceEeecC---CCCCcHHHHH-Hhh---ccCCceeeeCCCCCCCccccccccC
Q 005843 406 WDMFYSQH-----CAAEFHAVARAVGGCGVYVSDK---PGKHDFKILK-RLV---LADGSVLRAKYPGRPSRDCLFNDPV 473 (674)
Q Consensus 406 ~DMf~s~h-----~~a~~Haa~raisggPvyisD~---pg~hd~~lL~-~lv---~pdG~vlr~~~~g~pt~d~lf~dp~ 473 (674)
+||+.+++ ++...|+++|||..+||.+|.. ......++|. |.+ .+| ..|..-|-. +
T Consensus 259 pDmL~iGN~G~s~e~y~~qf~lWai~kAPLlms~Dlr~is~~~~~il~nk~~IaiNQD-------plgiqGr~i-----~ 326 (414)
T KOG2366|consen 259 PDMLEIGNGGMSYEEYKGQFALWAILKAPLLMSNDLRLISKQTKEILQNKEVIAINQD-------PLGIQGRKI-----V 326 (414)
T ss_pred hhHhhcCCCCccHHHHHHHHHHHHHhhchhhhccchhhcCHHHHHHhcChhheeccCC-------ccchhheee-----e
Confidence 99999987 6789999999999999999944 3344455554 222 233 001111000 0
Q ss_pred CCCcceEEEEeeccC--ceEEEEeecCCCCCCCccccccccccccccceeeeecCCccchhhhhcCCCCCCcEEEEEecC
Q 005843 474 MDGKSLLKIWNLNKC--TGVIGVFNCQGAGSWPCTEKESSVQENVDSVISGKVSPADVEYLEEVSGKQWTGDCAVFSFNT 551 (674)
Q Consensus 474 ~~~~~~Lki~~~~~~--~~vvg~FN~~~~~~w~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~a~~~~~~~~~vy~~~~ 551 (674)
.++. .+.||...-. .-.++.+|.+..+ .|..++ .+..++.... -...|.+..-=+
T Consensus 327 ~e~~-~ievw~~pls~~~~Ava~lNr~~~~--------------~~~~It-~~~l~~~g~~-------~~~~~~~~dLw~ 383 (414)
T KOG2366|consen 327 LEGD-SIEVWSGPLSGKSVAVAFLNRRKTG--------------IPARIT-AASLRELGLT-------NPASYTAHDLWS 383 (414)
T ss_pred ecCC-ceEEEeeccCCceEEEEEecccCCC--------------CCcccc-HHHHhhcCCC-------CCceeEeeehhh
Confidence 0111 2567765322 2344455533211 122222 1111111100 012344444445
Q ss_pred CeEEeccCCCeEEEEeecCceEEEEEeeee
Q 005843 552 GSLFRLAKAESFGIALKVMQCDVFTVSPIK 581 (674)
Q Consensus 552 g~~~~~~~~~~~~v~L~~~~~ei~t~~pv~ 581 (674)
+.+..++..+.+.+.+.|.+.-+|.+.|..
T Consensus 384 ~~~~~~~~~~~i~~~V~phG~~l~~l~~~~ 413 (414)
T KOG2366|consen 384 GVLGFLPTKDSISAQVNPHGVVLFVLHPSN 413 (414)
T ss_pred ccccccccCCeEEEEECCCCcEEEEEEecc
Confidence 555566668999999999999999887754
No 15
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=99.48 E-value=2e-13 Score=145.44 Aligned_cols=149 Identities=17% Similarity=0.311 Sum_probs=103.2
Q ss_pred ccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCcccc-CCCCC
Q 005843 120 LDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKEN-NKFRG 198 (674)
Q Consensus 120 ~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n-~KFp~ 198 (674)
+....||||++++..+|++.|++.++.+++.|+|+..++|||+||...+ +|.-+ +|||
T Consensus 12 ~~~p~W~~W~~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~g--------------------~f~~d~~~FP- 70 (303)
T cd06592 12 FRSPIWSTWARYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYG--------------------DFDFDPTKFP- 70 (303)
T ss_pred hCCCccCChhhhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccCC--------------------ccccChhhCC-
Confidence 4447899999999999999999999999999999999999999997533 34433 5899
Q ss_pred CCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCcc--ccccccc
Q 005843 199 TTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDL--SIDCMEM 276 (674)
Q Consensus 199 ~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~--~~~~~~~ 276 (674)
+++.++++||+ .|+| +++|..+. |.++++ .|++.. ..|.+-..++- .....-.
T Consensus 71 ----------dp~~mi~~l~~-~G~k-~~l~i~P~-----i~~~s~---~~~e~~-----~~g~~vk~~~g~~~~~~~~w 125 (303)
T cd06592 71 ----------DPKGMIDQLHD-LGFR-VTLWVHPF-----INTDSE---NFREAV-----EKGYLVSEPSGDIPALTRWW 125 (303)
T ss_pred ----------CHHHHHHHHHH-CCCe-EEEEECCe-----eCCCCH---HHHhhh-----hCCeEEECCCCCCCccccee
Confidence 68999999999 7999 89998874 666553 344311 01111111110 0000000
Q ss_pred ccc--CcCCCChHHHHHHHHHHHHHH-HhcCCcEEEEccCcc
Q 005843 277 EKY--GIGAIDPDKISQFYDDLHKYL-VSQGVDGVKVDVQNI 315 (674)
Q Consensus 277 ~~~--g~~l~~p~~~~~fy~~~~~~L-a~~GVD~VKvD~q~~ 315 (674)
+.. -+++.+|+ |++||.+.++.+ .+.|||++|.|++-.
T Consensus 126 ~g~~~~~Dftnp~-a~~w~~~~~~~~~~~~Gvdg~w~D~~E~ 166 (303)
T cd06592 126 NGTAAVLDFTNPE-AVDWFLSRLKSLQEKYGIDSFKFDAGEA 166 (303)
T ss_pred cCCcceEeCCCHH-HHHHHHHHHHHHHHHhCCcEEEeCCCCc
Confidence 001 14567775 667776666555 499999999999763
No 16
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=99.33 E-value=5.2e-11 Score=127.17 Aligned_cols=208 Identities=15% Similarity=0.157 Sum_probs=125.8
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCcccc-C
Q 005843 116 LPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKEN-N 194 (674)
Q Consensus 116 ~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n-~ 194 (674)
+|.+.=++-.|.| ...|+++|++.++.+++.|||+..++|||+|+... ++.+|.-| +
T Consensus 6 ~P~wa~G~~~~~~----~y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~------------------~~~~f~~d~~ 63 (308)
T cd06593 6 PPAWSFGLWLSRS----FYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEF------------------QWCDFEFDPD 63 (308)
T ss_pred CchHHHHHHHHcc----cCCCHHHHHHHHHHHHHcCCCeeEEEEecccccCC------------------cceeeEECcc
Confidence 4555433323444 33899999999999999999999999999999432 13456655 4
Q ss_pred CCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCcc-----
Q 005843 195 KFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDL----- 269 (674)
Q Consensus 195 KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~----- 269 (674)
||| .++.+++++|+ +|+| +.+|..+. |.++++ .|++... +|.+-..++-
T Consensus 64 ~FP-----------d~~~~i~~l~~-~G~~-~~~~~~P~-----i~~~~~---~~~e~~~-----~g~~v~~~~g~~~~~ 117 (308)
T cd06593 64 RFP-----------DPEGMLSRLKE-KGFK-VCLWINPY-----IAQKSP---LFKEAAE-----KGYLVKKPDGSVWQW 117 (308)
T ss_pred cCC-----------CHHHHHHHHHH-CCCe-EEEEecCC-----CCCCch---hHHHHHH-----CCeEEECCCCCeeee
Confidence 899 68999999999 7999 89998874 666654 3443210 1111111110
Q ss_pred -ccccccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCC------chhHHHHHHHHHHHHHH
Q 005843 270 -SIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGS------RVSLTRHFQQALEESIA 342 (674)
Q Consensus 270 -~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~------~~~~~~ay~~Al~~s~~ 342 (674)
.|.. ...-+++.+| ++++||.+.++.+.+.|||++|.|++..+..-...+.+ +-.....|.++..++++
T Consensus 118 ~~w~g---~~~~~Dftnp-~a~~w~~~~~~~~~~~Gid~~~~D~~e~~p~~~~~~~g~~~~~~hn~y~~~~~~~~~~~~~ 193 (308)
T cd06593 118 DLWQP---GMGIIDFTNP-DACKWYKDKLKPLLDMGVDCFKTDFGERIPTDVVYYDGSDGEKMHNYYALLYNKAVYEATK 193 (308)
T ss_pred cccCC---CcccccCCCH-HHHHHHHHHHHHHHHhCCcEEecCCCCCCCccccccCCCCcceeeeHHHHHHHHHHHHHHH
Confidence 0110 0011456676 57789988888999999999999998653221111111 11122334444444444
Q ss_pred hhCCC-CceEEeecCCCCccccccccceEecCCccCCCC
Q 005843 343 TNFKD-NSIICCMAQNTDSIFHSKRSAITRASDDYYPKN 380 (674)
Q Consensus 343 ~~f~g-~~ii~cMs~~~~~l~~~~~~~~~R~SdDf~p~~ 380 (674)
+..+. |+++.+-|..... .+++..| |.|....|
T Consensus 194 ~~~~~~r~~~~~Rs~~~Gs---qry~~~w--~GD~~s~w 227 (308)
T cd06593 194 EVKGEGEAVVWARSAWAGS---QKYPVHW--GGDCESTF 227 (308)
T ss_pred HhcCCCCeEEEEcCCcccc---ccCCCEE--CCCcccCH
Confidence 45543 5788777664321 1334444 55555444
No 17
>PRK10658 putative alpha-glucosidase; Provisional
Probab=99.14 E-value=4.3e-09 Score=122.95 Aligned_cols=238 Identities=15% Similarity=0.196 Sum_probs=142.9
Q ss_pred EEEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEec
Q 005843 82 VFVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDD 161 (674)
Q Consensus 82 v~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDD 161 (674)
.++-.|.+|-++++++.++. |. +.-+|.|.-++-.|+ .|+.+.+|+.|++.++.+++.+||+..+.||+
T Consensus 238 yy~~~G~tp~~v~~~Yt~LT----Gr-----p~lpP~WalG~w~s~--~~~~~~~e~~v~~~~~~~r~~~iP~d~i~lD~ 306 (665)
T PRK10658 238 YFVIDGPTPKEVLDRYTALT----GR-----PALPPAWSFGLWLTT--SFTTNYDEATVNSFIDGMAERDLPLHVFHFDC 306 (665)
T ss_pred EEEEeCCCHHHHHHHHHHHh----CC-----CCCCchhhhheeeec--ccccCCCHHHHHHHHHHHHHcCCCceEEEEch
Confidence 67778999999999887643 22 233566654443343 25556789999999999999999999999999
Q ss_pred CcccCCCCCcCCCCCCccccccCCcccCccc-cCCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcc
Q 005843 162 GWQDTTNEFQIEGEPFAEGTQFGGRLASIKE-NNKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLV 240 (674)
Q Consensus 162 GWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~-n~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~ 240 (674)
.|+.... |.+|+- .++|| ..+.+++++|+ .|+| +-+|..+ +|.
T Consensus 307 ~w~~~~~------------------~~~f~wd~~~FP-----------dp~~mi~~L~~-~G~k-~~~~i~P-----~i~ 350 (665)
T PRK10658 307 FWMKEFQ------------------WCDFEWDPRTFP-----------DPEGMLKRLKA-KGLK-ICVWINP-----YIA 350 (665)
T ss_pred hhhcCCc------------------eeeeEEChhhCC-----------CHHHHHHHHHH-CCCE-EEEeccC-----CcC
Confidence 9986421 345553 45899 67899999999 7999 7899776 466
Q ss_pred cCCcCcccccCcccccCCCCCCcccCC---ccccccccccccC--cCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcc
Q 005843 241 LNSSGTKMYNPEMKYPVQSPGNLANMR---DLSIDCMEMEKYG--IGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNI 315 (674)
Q Consensus 241 p~~~~~~~y~~~~~~p~~~~g~~~~~p---d~~~~~~~~~~~g--~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~ 315 (674)
++++ .|++... .|.+-..+ .|.++. +...+ +++.+| +|++||.+.++.|.+.|||++|.|+.-.
T Consensus 351 ~~s~---~f~e~~~-----~gy~vk~~~G~~~~~~~--W~g~~~~~Dftnp-~ar~W~~~~~~~l~d~Gvdgfw~D~gE~ 419 (665)
T PRK10658 351 QKSP---LFKEGKE-----KGYLLKRPDGSVWQWDK--WQPGMAIVDFTNP-DACKWYADKLKGLLDMGVDCFKTDFGER 419 (665)
T ss_pred CCch---HHHHHHH-----CCeEEECCCCCEeeeee--cCCCceeecCCCH-HHHHHHHHHHHHHHhcCCcEEEecCCce
Confidence 6553 3433210 11111111 111111 11111 456777 4788999988889999999999998654
Q ss_pred hhhhcCCCCC-ch-h----HHHHHHHHHHHHHHhhCC-CCceEEeecCCCCccccccccceEecCCccCCCCCC
Q 005843 316 LETICSGLGS-RV-S----LTRHFQQALEESIATNFK-DNSIICCMAQNTDSIFHSKRSAITRASDDYYPKNPT 382 (674)
Q Consensus 316 l~~~~~~~~~-~~-~----~~~ay~~Al~~s~~~~f~-g~~ii~cMs~~~~~l~~~~~~~~~R~SdDf~p~~~~ 382 (674)
+..-...+.| .. + ....|.+|.-+.+++..+ .|+++.+-|..... .+++.. =|.|....|..
T Consensus 420 ~p~d~~~~~G~~~~~~hN~Y~~l~~ka~~e~l~~~~~~~r~~i~tRs~~aGs---Qry~~~--WsGD~~stw~~ 488 (665)
T PRK10658 420 IPTDVVWFDGSDPQKMHNYYTYLYNKTVFDVLKETRGEGEAVLFARSATVGG---QQFPVH--WGGDCYSNYES 488 (665)
T ss_pred eeccceecCCCcHHHhcchhHHHHHHHHHHHHHHhcCCCceEEEEecccCCC---CCCCCE--ECCCCCCCHHH
Confidence 3211111111 11 1 122233333333344443 35677776654321 133322 24566666654
No 18
>PRK10426 alpha-glucosidase; Provisional
Probab=98.99 E-value=1.2e-07 Score=110.62 Aligned_cols=237 Identities=16% Similarity=0.188 Sum_probs=136.3
Q ss_pred EEEEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEe
Q 005843 81 AVFVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIID 160 (674)
Q Consensus 81 ~v~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viID 160 (674)
-+++-.|.+|.++++++.++. |+ ...+|.|.- -|+ |-.+. =++++|++.++.+++.+||+..|.||
T Consensus 178 d~y~~~G~~~~~vi~~yt~lt----Gr-----~p~~P~Wal-~G~--~~g~~--~~~~~v~~v~~~~r~~~IP~d~i~ld 243 (635)
T PRK10426 178 TLRFECADTYISLLEKLTALF----GR-----QPELPDWAY-DGV--TLGIQ--GGTEVVQKKLDTMRNAGVKVNGIWAQ 243 (635)
T ss_pred eEEEEeCCCHHHHHHHHHHhh----CC-----CCCCChhhc-cCc--ccccc--CCHHHHHHHHHHHHHcCCCeeEEEEe
Confidence 367788999999999887643 22 233565542 033 22232 25788999999999999999999998
Q ss_pred cCcccCCCCCcCCCCCCccccccC-CcccCcccc-CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCC
Q 005843 161 DGWQDTTNEFQIEGEPFAEGTQFG-GRLASIKEN-NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGG 238 (674)
Q Consensus 161 DGWq~~~~d~~~~~~~~~~g~~~~-~~L~~~~~n-~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgG 238 (674)
| |+..+... |. +.+.+|.-| ++|| ..+.+++++|+ .|+| +-+|..+ +
T Consensus 244 d-w~~~~~~~------------~g~~~~~~~~~d~~~FP-----------dp~~mi~~L~~-~G~k-~v~~i~P-----~ 292 (635)
T PRK10426 244 D-WSGIRMTS------------FGKRLMWNWKWDSERYP-----------QLDSRIKQLNE-EGIQ-FLGYINP-----Y 292 (635)
T ss_pred c-cccccccc------------ccccccccceEChhhCC-----------CHHHHHHHHHH-CCCE-EEEEEcC-----c
Confidence 5 98654321 11 112345534 5899 78999999999 7999 6688665 4
Q ss_pred cccCCcCcccccCcccccCCCCCCcccCCcc---ccccccccc-cC-cCCCChHHHHHHHH-HHHHHHHhcCCcEEEEcc
Q 005843 239 LVLNSSGTKMYNPEMKYPVQSPGNLANMRDL---SIDCMEMEK-YG-IGAIDPDKISQFYD-DLHKYLVSQGVDGVKVDV 312 (674)
Q Consensus 239 I~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~---~~~~~~~~~-~g-~~l~~p~~~~~fy~-~~~~~La~~GVD~VKvD~ 312 (674)
|.++.+ .|++... .|.+...++- ..+. .+. .+ +++.+|+ +++||. .+.+.|.+.|||++|.|+
T Consensus 293 v~~~~~---~y~e~~~-----~gy~vk~~~g~~~~~~~--~~~~~~~~Dftnp~-ar~Ww~~~~~~~~~~~Gvdg~w~D~ 361 (635)
T PRK10426 293 LASDGD---LCEEAAE-----KGYLAKDADGGDYLVEF--GEFYAGVVDLTNPE-AYEWFKEVIKKNMIGLGCSGWMADF 361 (635)
T ss_pred cCCCCH---HHHHHHH-----CCcEEECCCCCEEEeEe--cCCCceeecCCCHH-HHHHHHHHHHHHHhhcCCCEEeeeC
Confidence 655543 3443210 1222111110 0000 000 01 4667775 666775 456789999999999998
Q ss_pred CcchhhhcCCCCC-c-h--------hHHHHHHHHHHHHHHhhCC-CCceEEeecCCCCccccccccceEecCCccCCCCC
Q 005843 313 QNILETICSGLGS-R-V--------SLTRHFQQALEESIATNFK-DNSIICCMAQNTDSIFHSKRSAITRASDDYYPKNP 381 (674)
Q Consensus 313 q~~l~~~~~~~~~-~-~--------~~~~ay~~Al~~s~~~~f~-g~~ii~cMs~~~~~l~~~~~~~~~R~SdDf~p~~~ 381 (674)
+-.+..-...+.+ . . ..+++.++++++ ..+ +|+++.+-|..... .+++.+.- |.|....|.
T Consensus 362 ~E~~p~d~~~~~g~~~~~~hN~Y~~l~~~~~~e~~~~----~~~~~r~f~ltRsg~aGs---Qry~~~~W-sGD~~ssW~ 433 (635)
T PRK10426 362 GEYLPTDAYLHNGVSAEIMHNAWPALWAKCNYEALEE----TGKLGEILFFMRAGYTGS---QKYSTLFW-AGDQNVDWS 433 (635)
T ss_pred CCCCCCcceeeCCCCHHHhccHHHHHHHHHHHHHHHH----hcCCCCcEEEEccccCCc---CCcccccc-CCCCCCcCc
Confidence 7643221101111 1 1 123333444443 332 57788777754321 24444321 567777775
No 19
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.90 E-value=3e-08 Score=106.57 Aligned_cols=154 Identities=21% Similarity=0.214 Sum_probs=103.7
Q ss_pred ccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCcccc
Q 005843 114 KQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKEN 193 (674)
Q Consensus 114 k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n 193 (674)
..+|.+.-++-.|.|. | -++++|++.++.+++.+||+..|.||++|+..+.+.. ...+|.-|
T Consensus 4 ~l~P~wa~G~~~s~~~-y---~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~--------------~~~~f~wd 65 (317)
T cd06598 4 PLPPRWALGNWASRFG-Y---RNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKG--------------HMGNLDWD 65 (317)
T ss_pred CCCchHHHHHHHhcCC-C---CCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCC--------------ceeeeEec
Confidence 3466666566677763 2 3789999999999999999999999999997554211 13345544
Q ss_pred -CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCC-cccCCc---
Q 005843 194 -NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGN-LANMRD--- 268 (674)
Q Consensus 194 -~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~-~~~~pd--- 268 (674)
++|| ..+.+++++|+ +|+| +-+|..+ .|.++++ .|++... .|. +.+..+
T Consensus 66 ~~~FP-----------dp~~mi~~L~~-~G~k-~~~~v~P-----~v~~~~~---~y~e~~~-----~g~l~~~~~~~~~ 119 (317)
T cd06598 66 RKAFP-----------DPAGMIADLAK-KGVK-TIVITEP-----FVLKNSK---NWGEAVK-----AGALLKKDQGGVP 119 (317)
T ss_pred cccCC-----------CHHHHHHHHHH-cCCc-EEEEEcC-----cccCCch---hHHHHHh-----CCCEEEECCCCCE
Confidence 5899 67999999999 7999 6788766 3666553 3433211 111 100000
Q ss_pred ccccccccccc--CcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 269 LSIDCMEMEKY--GIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 269 ~~~~~~~~~~~--g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
...+. ++.. -+++.+|+ +++||.+.++.+.+.|||++|.|++-
T Consensus 120 ~~~~~--w~g~~~~~Dftnp~-a~~w~~~~~~~~~~~Gvdg~w~D~~E 164 (317)
T cd06598 120 TLFDF--WFGNTGLIDWFDPA-AQAWFHDNYKKLIDQGVTGWWGDLGE 164 (317)
T ss_pred eeeec--cCCCccccCCCCHH-HHHHHHHHHHHhhhCCccEEEecCCC
Confidence 00000 0111 14667775 78999999999999999999999974
No 20
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.87 E-value=8.5e-08 Score=101.93 Aligned_cols=211 Identities=16% Similarity=0.107 Sum_probs=126.5
Q ss_pred ccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCcccc
Q 005843 114 KQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKEN 193 (674)
Q Consensus 114 k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n 193 (674)
.-+|.+.=++-+|.|. + .|+++|++.++.+++.+||+..|+||++|+.......+ ...+.+|.=|
T Consensus 5 ~~~P~walG~~qsr~~-y---~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~-----------~~~~~~ft~d 69 (292)
T cd06595 5 PLLPRYAFGNWWSRYW-P---YSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKY-----------GSGWTGYSWN 69 (292)
T ss_pred CCCchHHHHhHhhCCc-C---CCHHHHHHHHHHHHHhCCCccEEEEecccccccccccc-----------cCCcceeEEC
Confidence 3456666566668763 2 38899999999999999999999999999875421100 1124456644
Q ss_pred -CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCccccc
Q 005843 194 -NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSID 272 (674)
Q Consensus 194 -~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~ 272 (674)
++|| +.+.+++++|+ .|+| +-+|.-+. -++.+.. +.|++- .. ..+.......
T Consensus 70 ~~~FP-----------dp~~mi~~Lh~-~G~k-~v~~v~P~---~~~~~~~---~~y~~~-~~---~~~~~~~~~~---- 122 (292)
T cd06595 70 RKLFP-----------DPEKLLQDLHD-RGLK-VTLNLHPA---DGIRAHE---DQYPEM-AK---ALGVDPATEG---- 122 (292)
T ss_pred hhcCC-----------CHHHHHHHHHH-CCCE-EEEEeCCC---cccCCCc---HHHHHH-HH---hcCCCcccCC----
Confidence 5899 78999999999 7999 56887653 1233322 124321 00 0010000000
Q ss_pred cccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhH--HHHHHHHHHHHHHhhCCCCce
Q 005843 273 CMEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSL--TRHFQQALEESIATNFKDNSI 350 (674)
Q Consensus 273 ~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~--~~ay~~Al~~s~~~~f~g~~i 350 (674)
..=+++++|+-.+.|++.+++.|.+.|||++|.|++-...... .+..... ....+.... + -..|++
T Consensus 123 -----~~~~D~tnp~a~~~w~~~~~~~~~~~Gidg~W~D~~E~~~~~~--~~~~~~~~~~~~~y~~~~----~-~~~r~f 190 (292)
T cd06595 123 -----PILFDLTNPKFMDAYFDNVHRPLEKQGVDFWWLDWQQGNRTRT--PGLDPLWWLNHVHYLDSA----R-NGRRPL 190 (292)
T ss_pred -----eEEecCCCHHHHHHHHHHHHHHHHhcCCcEEEecCCCCccccc--CCcchHHHHHHHHHHHhh----c-cCCCcE
Confidence 0013567887666678999999999999999999865322111 1111111 111222221 1 225778
Q ss_pred EEeecCCCCccccccccceEecCCccCCCCCCh
Q 005843 351 ICCMAQNTDSIFHSKRSAITRASDDYYPKNPTT 383 (674)
Q Consensus 351 i~cMs~~~~~l~~~~~~~~~R~SdDf~p~~~~~ 383 (674)
|.+-|.... ..+++..| |.|....|...
T Consensus 191 ~lsRs~~~G---~qry~~~W--sGD~~s~W~~l 218 (292)
T cd06595 191 IFSRWAGLG---SHRYPIGF--SGDTIISWASL 218 (292)
T ss_pred EEEeecccC---CCcCCCcc--CCCcccCHHHH
Confidence 887775432 12566666 78887777543
No 21
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=98.85 E-value=1.3e-07 Score=106.05 Aligned_cols=235 Identities=17% Similarity=0.206 Sum_probs=130.7
Q ss_pred EEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecC
Q 005843 83 FVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDG 162 (674)
Q Consensus 83 ~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDG 162 (674)
++-.|++|-++++++.++. |+ +..+|.+.-++-+|-|.. -|++.|++.++.+++.++|+..++||++
T Consensus 1 y~~~G~~~~~v~~~y~~lt----G~-----~~~pP~walG~~~~~~~~----~~~~~v~~~i~~~~~~~iP~d~~~iD~~ 67 (441)
T PF01055_consen 1 YFFSGPTPKEVLRQYTELT----GR-----PPLPPRWALGFWQSRWGY----YNQDEVREVIDRYRSNGIPLDVIWIDDD 67 (441)
T ss_dssp EEEEESSHHHHHHHHHHHH----SS-----S----GGGGSEEEEESTB----TSHHHHHHHHHHHHHTT--EEEEEE-GG
T ss_pred CEEeCcCHHHHHHHHHHHH----CC-----CCCCchhhhceEeecCcC----CCHHHHHHHHHHHHHcCCCccceecccc
Confidence 3567888888888887654 22 234677766666666643 5689999999999999999999999999
Q ss_pred cccCCCCCcCCCCCCccccccCCcccCcccc-CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCccc
Q 005843 163 WQDTTNEFQIEGEPFAEGTQFGGRLASIKEN-NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVL 241 (674)
Q Consensus 163 Wq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n-~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p 241 (674)
|+...++ |.-| ++|| +++.+++.+|+ .|+| +.+|..+ +|.+
T Consensus 68 ~~~~~~~--------------------f~~d~~~FP-----------d~~~~~~~l~~-~G~~-~~~~~~P-----~v~~ 109 (441)
T PF01055_consen 68 YQDGYGD--------------------FTWDPERFP-----------DPKQMIDELHD-QGIK-VVLWVHP-----FVSN 109 (441)
T ss_dssp GSBTTBT--------------------T-B-TTTTT-----------THHHHHHHHHH-TT-E-EEEEEES-----EEET
T ss_pred ccccccc--------------------ccccccccc-----------chHHHHHhHhh-CCcE-EEEEeec-----ccCC
Confidence 9985442 3333 4899 89999999999 7999 7899887 3666
Q ss_pred CCcCcccccCcccccCCCCCCcccCCcc------ccccccccccCcCCCChHHHHHHHHHHHHHHHhc-CCcEEEEccCc
Q 005843 242 NSSGTKMYNPEMKYPVQSPGNLANMRDL------SIDCMEMEKYGIGAIDPDKISQFYDDLHKYLVSQ-GVDGVKVDVQN 314 (674)
Q Consensus 242 ~~~~~~~y~~~~~~p~~~~g~~~~~pd~------~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~La~~-GVD~VKvD~q~ 314 (674)
++...+.|+.... .|.+-..++- .|.. ...=+++.+|+ +++||.+.++.+.+. |||++|.|++-
T Consensus 110 ~~~~~~~~~~~~~-----~~~~v~~~~g~~~~~~~w~g---~~~~~Dftnp~-a~~w~~~~~~~~~~~~Gvdg~w~D~~E 180 (441)
T PF01055_consen 110 DSPDYENYDEAKE-----KGYLVKNPDGSPYIGRVWPG---KGGFIDFTNPE-ARDWWKEQLKELLDDYGVDGWWLDFGE 180 (441)
T ss_dssp TTTB-HHHHHHHH-----TT-BEBCTTSSB-EEEETTE---EEEEB-TTSHH-HHHHHHHHHHHHHTTST-SEEEEESTT
T ss_pred CCCcchhhhhHhh-----cCceeecccCCcccccccCC---cccccCCCChh-HHHHHHHHHHHHHhccCCceEEeecCC
Confidence 5431112322210 0111111110 0110 00014566765 788887777666666 99999999954
Q ss_pred chh--------hhcCCCCC------chhHHHHHHHHHHHHHHhhC-CCCceEEeecCCCCccccccccceEecCCccCCC
Q 005843 315 ILE--------TICSGLGS------RVSLTRHFQQALEESIATNF-KDNSIICCMAQNTDSIFHSKRSAITRASDDYYPK 379 (674)
Q Consensus 315 ~l~--------~~~~~~~~------~~~~~~ay~~Al~~s~~~~f-~g~~ii~cMs~~~~~l~~~~~~~~~R~SdDf~p~ 379 (674)
... .....+.+ +-.....+.++...++++.. ..++++.|.|.+... .+++..| +.|..-.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~sRs~~~G~---qr~~~~w--~GD~~s~ 255 (441)
T PF01055_consen 181 PSSFDSNNTLPEDAVHHDGYSGYEMHNLYGLLYAKATYEALREIDPNKRPFIFSRSGWAGS---QRYGGHW--SGDNSSS 255 (441)
T ss_dssp TBSSTTTBSBCTTEECTTECEHHHHGGGHHHHHHHHHHHHHHHHSTTSC-EEEESSEETTG---GGTCEEE--ECSSBSS
T ss_pred cccccccccCcccceecCCCCchheeccccccchhhhhhhhhhccCCCCcceeecccCCCC---Cccceee--ccccccc
Confidence 321 00001111 11122233444444343332 356788887765321 1334442 5566666
Q ss_pred CCC
Q 005843 380 NPT 382 (674)
Q Consensus 380 ~~~ 382 (674)
|..
T Consensus 256 w~~ 258 (441)
T PF01055_consen 256 WDG 258 (441)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 22
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=98.84 E-value=6.9e-08 Score=103.89 Aligned_cols=154 Identities=14% Similarity=0.124 Sum_probs=99.6
Q ss_pred cCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCcccc-
Q 005843 115 QLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKEN- 193 (674)
Q Consensus 115 ~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n- 193 (674)
-+|.+.=++-+|.|.. -+++.|++.++.+++.+||+..++||..|+...+ +.+|.-+
T Consensus 5 m~P~walG~~~sr~~y----~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~------------------~~~f~~d~ 62 (319)
T cd06591 5 MMPKWAYGFWQSKERY----KTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQG------------------WGEWKFDP 62 (319)
T ss_pred CCchHHHHHHHhcccC----CCHHHHHHHHHHHHHhCCCccEEEEechhhcCCC------------------ceeEEECh
Confidence 3566665666777732 3899999999999999999999999998876432 3345534
Q ss_pred CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCcccccc
Q 005843 194 NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDC 273 (674)
Q Consensus 194 ~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~ 273 (674)
+||| ..+.+++++|+ .|+| +-+|.-+ +|.++++..+..+.+-..-+.+.|.... ..|..
T Consensus 63 ~~FP-----------dp~~mi~~L~~-~G~k-v~~~i~P-----~v~~~~~~y~e~~~~g~~v~~~~g~~~~---~~w~g 121 (319)
T cd06591 63 ERFP-----------DPKAMVRELHE-MNAE-LMISIWP-----TFGPETENYKEMDEKGYLIKTDRGPRVT---MQFGG 121 (319)
T ss_pred hhCC-----------CHHHHHHHHHH-CCCE-EEEEecC-----CcCCCChhHHHHHHCCEEEEcCCCCeee---eeCCC
Confidence 5899 68999999998 7999 6678765 3666553222222211111111111100 01110
Q ss_pred ccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 274 MEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 274 ~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
...=+++.+|+....|++.+++.|.+.|||++|.|++-
T Consensus 122 ---~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E 159 (319)
T cd06591 122 ---NTRFYDATNPEAREYYWKQLKKNYYDKGVDAWWLDAAE 159 (319)
T ss_pred ---CccccCCCCHHHHHHHHHHHHHHhhcCCCcEEEecCCC
Confidence 00015667886444455778888999999999999985
No 23
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.72 E-value=4.4e-07 Score=97.57 Aligned_cols=153 Identities=11% Similarity=0.148 Sum_probs=101.4
Q ss_pred cCCCcccccccccccccc--cccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccc
Q 005843 115 QLPGMLDWFGWCTWDAFY--QEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKE 192 (674)
Q Consensus 115 ~~P~~~~~~GWcTW~a~~--~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~ 192 (674)
-+|.|.=++-.|.| .|. .+.++++|++.++.+++.+||+..+.||++|++..+.. ..+|.-
T Consensus 5 mpP~walG~~~sr~-~Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~~----------------~~~f~~ 67 (317)
T cd06599 5 MVPRWSLGYSGSTM-YYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGGK----------------RYVFNW 67 (317)
T ss_pred CCchHHHHHHhcCC-CCCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCCc----------------eeeeec
Confidence 35666666778888 232 24679999999999999999999999999999862210 112332
Q ss_pred -cCCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccC-----
Q 005843 193 -NNKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANM----- 266 (674)
Q Consensus 193 -n~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~----- 266 (674)
.++|| ..+.+++++|+ .|+| +-+|.-+. |.++++ .|++... .|.+-..
T Consensus 68 d~~~FP-----------dp~~mi~~L~~-~g~k-~~~~i~P~-----i~~~~~---~y~e~~~-----~g~~v~~~~g~~ 121 (317)
T cd06599 68 NKDRFP-----------DPAAFVAKFHE-RGIR-LAPNIKPG-----LLQDHP---RYKELKE-----AGAFIKPPDGRE 121 (317)
T ss_pred CcccCC-----------CHHHHHHHHHH-CCCE-EEEEeCCc-----ccCCCH---HHHHHHH-----CCcEEEcCCCCC
Confidence 36899 78999999999 7999 67888764 666543 3433211 1111110
Q ss_pred CccccccccccccC--cCCCChHHHHHHHHHHH-HHHHhcCCcEEEEccCc
Q 005843 267 RDLSIDCMEMEKYG--IGAIDPDKISQFYDDLH-KYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 267 pd~~~~~~~~~~~g--~~l~~p~~~~~fy~~~~-~~La~~GVD~VKvD~q~ 314 (674)
|.... . ++..+ +++.+|+ |+++|...+ +.|.+.|||++|.|++-
T Consensus 122 ~~~~~-~--w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~~Gvdg~w~D~~E 168 (317)
T cd06599 122 PSIGQ-F--WGGVGSFVDFTNPE-GREWWKEGVKEALLDLGIDSTWNDNNE 168 (317)
T ss_pred cceec-c--cCCCeEeecCCChH-HHHHHHHHHHHHHhcCCCcEEEecCCC
Confidence 11000 0 11111 4667875 667776655 78899999999999874
No 24
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=98.71 E-value=4.6e-07 Score=97.44 Aligned_cols=219 Identities=14% Similarity=0.133 Sum_probs=120.3
Q ss_pred ccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccc-
Q 005843 114 KQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKE- 192 (674)
Q Consensus 114 k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~- 192 (674)
+-+|.+.-++=+|.+. . ++++|++.++.+++.+||+..+.|| .|+.......+ . +-+.+|.-
T Consensus 4 p~~P~wa~G~~~~~~~---~--s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~g--------~---~~~~~f~~d 66 (317)
T cd06594 4 PELPDWAYGGAILGLQ---G--GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSFG--------D---RLWWNWEWD 66 (317)
T ss_pred CCCchhhhCcEEeeee---C--CHHHHHHHHHHHHHcCCCeeEEEEc-cccCccccccc--------c---eeeeeeEEC
Confidence 3467676554455542 2 9999999999999999999999999 58653211100 0 01223443
Q ss_pred cCCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCcc---
Q 005843 193 NNKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDL--- 269 (674)
Q Consensus 193 n~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~--- 269 (674)
.++|| ..+.+++++|+ .|+| +-+|.-+ +|.+++.. .|+.... .|.+...++-
T Consensus 67 ~~~FP-----------dp~~mi~~Lh~-~G~~-~~~~i~P-----~v~~~~~~--~y~~~~~-----~g~~vk~~~g~~~ 121 (317)
T cd06594 67 PERYP-----------GLDELIEELKA-RGIR-VLTYINP-----YLADDGPL--YYEEAKD-----AGYLVKDADGSPY 121 (317)
T ss_pred hhhCC-----------CHHHHHHHHHH-CCCE-EEEEecC-----ceecCCch--hHHHHHH-----CCeEEECCCCCee
Confidence 45899 68999999999 7999 6688766 46665431 1233210 1111111110
Q ss_pred cccccccccc--CcCCCChHHHHHHH-HHHHHHHHhcCCcEEEEccCcchhhhcCCCCCc--hh----HHHHHHHHHHHH
Q 005843 270 SIDCMEMEKY--GIGAIDPDKISQFY-DDLHKYLVSQGVDGVKVDVQNILETICSGLGSR--VS----LTRHFQQALEES 340 (674)
Q Consensus 270 ~~~~~~~~~~--g~~l~~p~~~~~fy-~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~--~~----~~~ay~~Al~~s 340 (674)
.... ++.. =+++.+|+ ++++| +.+.+.+.+.|||++|.|++-.+..-...+.+. .+ ....|.+|..+.
T Consensus 122 ~~~~--w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~~Gvdg~w~D~~E~~p~d~~~~~g~~~~~~hN~y~~~~~~~~~~~ 198 (317)
T cd06594 122 LVDF--GEFDCGVLDLTNPA-ARDWFKQVIKEMLLDLGLSGWMADFGEYLPFDAVLHSGEDAATMHNRYPELWAKLNREA 198 (317)
T ss_pred eecc--CCCCceeeecCCHH-HHHHHHHHHHHHhhhcCCcEEEecCCCCCCCcceecCCCCHHHHhhHHHHHHHHHHHHH
Confidence 0000 0111 14667776 56666 555556688999999999875431111111111 11 122233333333
Q ss_pred HHhhCC-CCceEEeecCCCCccccccccceEecCCccCCCCC
Q 005843 341 IATNFK-DNSIICCMAQNTDSIFHSKRSAITRASDDYYPKNP 381 (674)
Q Consensus 341 ~~~~f~-g~~ii~cMs~~~~~l~~~~~~~~~R~SdDf~p~~~ 381 (674)
+++..+ +|++|.+-|..... .+++.+.+ |.|....|.
T Consensus 199 ~~~~~~~~r~fvltRs~~~Gs---qry~~~~W-sGD~~s~W~ 236 (317)
T cd06594 199 VEEAGKTGDILFFMRSGFTGS---QKYSTLFW-AGDQMVSWD 236 (317)
T ss_pred HHHhccCCCeEEEEccccccc---cccccccc-CCCCCCCCc
Confidence 334443 46777777664321 24444433 456666665
No 25
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.59 E-value=1.9e-06 Score=93.65 Aligned_cols=229 Identities=15% Similarity=0.222 Sum_probs=120.7
Q ss_pred ccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCC-----CCcCCCCCCccccccCCccc
Q 005843 114 KQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTN-----EFQIEGEPFAEGTQFGGRLA 188 (674)
Q Consensus 114 k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~-----d~~~~~~~~~~g~~~~~~L~ 188 (674)
.-+|.+.-++..|.|. -.|+++|++.++.+++.+||+..|.||| ||..+. |.+.- ..+....|. +.
T Consensus 4 ~lpP~walG~~~sr~~----Y~~~~ev~~v~~~~~~~~iP~d~i~lD~-W~~~~~~~~w~d~~y~--~~~~~~~~~--~~ 74 (340)
T cd06597 4 ELLPKWAFGLWMSANE----WDTQAEVMRQMDAHEEHGIPVTVVVIEQ-WSDEATFYVFNDAQYT--PKDGGAPLS--YD 74 (340)
T ss_pred CCCchHHhhhhhhccC----CCCHHHHHHHHHHHHHcCCCeeEEEEec-ccCcceeeeeccchhc--ccccCCcce--ec
Confidence 3456666667777763 3688999999999999999999999996 997532 10000 000000011 11
Q ss_pred C--ccccCCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcC-cc---cccCcc---cccCCC
Q 005843 189 S--IKENNKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSG-TK---MYNPEM---KYPVQS 259 (674)
Q Consensus 189 ~--~~~n~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~-~~---~y~~~~---~~p~~~ 259 (674)
+ |...++|| ..+.+++++|+ .|+| +-+|..+. |.++... .+ .|+..+ ..-+..
T Consensus 75 ~~~f~~~~~FP-----------dp~~mi~~Lh~-~G~k-v~l~v~P~-----i~~~~~~~~~~~~~~~~~~~~g~~vk~~ 136 (340)
T cd06597 75 DFSFPVEGRWP-----------NPKGMIDELHE-QGVK-VLLWQIPI-----IKLRPHPHGQADNDEDYAVAQNYLVQRG 136 (340)
T ss_pred ccccCccccCC-----------CHHHHHHHHHH-CCCE-EEEEecCc-----cccccccccccchhHHHHHHCCEEEEcC
Confidence 1 22224788 78999999999 7999 67897763 5443210 00 010000 000000
Q ss_pred CCCcccCCccccccccccccC--cCCCChHHHHHHHHHHHHHHH-hcCCcEEEEccCcchhhh-cCCCCCc-hh-----H
Q 005843 260 PGNLANMRDLSIDCMEMEKYG--IGAIDPDKISQFYDDLHKYLV-SQGVDGVKVDVQNILETI-CSGLGSR-VS-----L 329 (674)
Q Consensus 260 ~g~~~~~pd~~~~~~~~~~~g--~~l~~p~~~~~fy~~~~~~La-~~GVD~VKvD~q~~l~~~-~~~~~~~-~~-----~ 329 (674)
.|....-|. .| +..+ +++.+|+ |++||.+.++.+. +.|||++|.|+.-..-.. ...+.+. .. .
T Consensus 137 ~G~~~~~~~-~W-----~g~~~~~Dftnp~-a~~Ww~~~~~~~~~~~Gidg~w~D~~E~~~~~~~~~~~g~~~~~~hN~y 209 (340)
T cd06597 137 VGKPYRIPG-QW-----FPDSLMLDFTNPE-AAQWWMEKRRYLVDELGIDGFKTDGGEHVWGRDLHFRDGRRGDEMRNTY 209 (340)
T ss_pred CCCcccccc-cc-----CCCceeecCCCHH-HHHHHHHHHHHHHHhcCCcEEEecCCCccCCCCceecCCCcHHHhhccc
Confidence 110000010 01 1111 5667775 6678887777665 799999999987432000 0001110 00 1
Q ss_pred HHHHHHHHHHHHHhhCCCCceEEeecCCCCccccccccceEecCCccCCCCCC
Q 005843 330 TRHFQQALEESIATNFKDNSIICCMAQNTDSIFHSKRSAITRASDDYYPKNPT 382 (674)
Q Consensus 330 ~~ay~~Al~~s~~~~f~g~~ii~cMs~~~~~l~~~~~~~~~R~SdDf~p~~~~ 382 (674)
...|.+|..+.+++. ..|+++.+-|..... .+++..| |.|....|..
T Consensus 210 ~~~~~~~~~e~~~~~-~~r~filtRs~~~Gs---qry~~~W--sGD~~s~W~~ 256 (340)
T cd06597 210 PNHYVRAYNDFLRRA-KKDGVTFSRAGYTGA---QAHGIFW--AGDENSTFGA 256 (340)
T ss_pred HHHHHHHHHHHHHhc-cCCcEEEEecccCcc---CCCccee--cCCCCCCHHH
Confidence 122334444333333 457788777764321 2444444 6677766653
No 26
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=98.59 E-value=2.2e-07 Score=100.74 Aligned_cols=152 Identities=14% Similarity=0.224 Sum_probs=97.3
Q ss_pred ccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccc-
Q 005843 114 KQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKE- 192 (674)
Q Consensus 114 k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~- 192 (674)
.-+|.+.=++-.|.|.. -|++.|++.++.+++.+||+..+.||++|+...+ +|.-
T Consensus 4 ~l~P~walG~~~s~~~y----~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~--------------------~f~~d 59 (339)
T cd06604 4 PLPPKWALGYQQSRWSY----YPEEEVREIADEFRERDIPCDAIYLDIDYMDGYR--------------------VFTWD 59 (339)
T ss_pred CCCchHHHhHHhcCCCC----CCHHHHHHHHHHHHHhCCCcceEEECchhhCCCC--------------------ceeec
Confidence 34566665555555543 3889999999999999999999999999996432 2232
Q ss_pred cCCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCccc-c
Q 005843 193 NNKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLS-I 271 (674)
Q Consensus 193 n~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~-~ 271 (674)
.++|| ..+.+++++|+ +|+| +-+|+.+. |..+. ....|++... .|.+-..++-. .
T Consensus 60 ~~~fP-----------dp~~m~~~l~~-~g~~-~~~~~~P~-----v~~~~-~~~~~~e~~~-----~g~~v~~~~g~~~ 115 (339)
T cd06604 60 KERFP-----------DPKELIKELHE-QGFK-VVTIIDPG-----VKVDP-GYDVYEEGLE-----NDYFVKDPDGELY 115 (339)
T ss_pred cccCC-----------CHHHHHHHHHH-CCCE-EEEEEeCc-----eeCCC-CChHHHHHHH-----CCeEEECCCCCEE
Confidence 35999 68999999999 7999 67897764 32221 1123332210 01111111100 0
Q ss_pred cccccccc-C-cCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 272 DCMEMEKY-G-IGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 272 ~~~~~~~~-g-~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
...-++.. + +++.+|+ +++||.+.++.+.+.|||++|.|++-
T Consensus 116 ~~~~w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~Gvdg~w~D~~E 159 (339)
T cd06604 116 IGRVWPGLSAFPDFTNPK-VREWWGSLYKKFVDLGVDGIWNDMNE 159 (339)
T ss_pred EEEecCCCccccCCCChH-HHHHHHHHHHHHhhCCCceEeecCCC
Confidence 00000111 1 4667775 67788888888889999999999874
No 27
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=98.53 E-value=3.3e-06 Score=88.57 Aligned_cols=73 Identities=18% Similarity=0.404 Sum_probs=58.3
Q ss_pred cccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCcccc-CCCCCCCCCCCc
Q 005843 127 TWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKEN-NKFRGTTGDDQK 205 (674)
Q Consensus 127 TW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n-~KFp~~~~~~~~ 205 (674)
.|-+.+...++++|++.++.+++.++|+..+.||++|+...++. .|.-| ++||
T Consensus 13 ~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~f------------------~~~~d~~~Fp-------- 66 (265)
T cd06589 13 YWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGDF------------------TFDWDAGKFP-------- 66 (265)
T ss_pred HHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCcee------------------eeecChhhCC--------
Confidence 44444456799999999999999999999999999999865532 02333 5899
Q ss_pred CCCChHHHHHHHHHhCCCcEEEEEe
Q 005843 206 ETSGLKDFVLDIKKNFCLKYVYVWH 230 (674)
Q Consensus 206 ~~~GL~~lv~~I~~~~Glk~vgvWh 230 (674)
..+.+++++|+ .|+| +.+|.
T Consensus 67 ---dp~~~i~~l~~-~g~~-~~~~~ 86 (265)
T cd06589 67 ---NPKSMIDELHD-NGVK-LVLWI 86 (265)
T ss_pred ---CHHHHHHHHHH-CCCE-EEEEe
Confidence 68999999999 7999 66773
No 28
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=98.50 E-value=4.9e-06 Score=90.37 Aligned_cols=210 Identities=15% Similarity=0.113 Sum_probs=119.8
Q ss_pred ccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccc-
Q 005843 114 KQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKE- 192 (674)
Q Consensus 114 k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~- 192 (674)
.-+|.+.=++-+|.|.. -+++.|++.++.+++.+||+..+.||++|+...+ +|.-
T Consensus 4 ~lpP~walG~~~s~~~y----~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~--------------------~f~~d 59 (339)
T cd06602 4 AMPPYWALGFHLCRWGY----KNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRR--------------------DFTLD 59 (339)
T ss_pred CCCchHHhhhHhcCCCC----CCHHHHHHHHHHHHHhCCCcceEEECcccccCcc--------------------ceecc
Confidence 34677776677788743 3789999999999999999999999999997543 2333
Q ss_pred cCCCCCCCCCCCcCCCCh--HHHHHHHHHhCCCcEEEEEeeccCccCCcccCC--cCcccccCcccccCCCCCCcccCCc
Q 005843 193 NNKFRGTTGDDQKETSGL--KDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNS--SGTKMYNPEMKYPVQSPGNLANMRD 268 (674)
Q Consensus 193 n~KFp~~~~~~~~~~~GL--~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~--~~~~~y~~~~~~p~~~~g~~~~~pd 268 (674)
.++|| .. +.+++++|+ .|+| +-+|..+. |.++. .....|++.+. .|.+...++
T Consensus 60 ~~~FP-----------dp~~~~mi~~L~~-~G~k-~~~~i~P~-----v~~~~~~~~~~~~~e~~~-----~g~~v~~~~ 116 (339)
T cd06602 60 PVRFP-----------GLKMPEFVDELHA-NGQH-YVPILDPA-----ISANEPTGSYPPYDRGLE-----MDVFIKNDD 116 (339)
T ss_pred cccCC-----------CccHHHHHHHHHH-CCCE-EEEEEeCc-----cccCcCCCCCHHHHHHHH-----CCeEEECCC
Confidence 34899 55 999999999 7999 67897763 54431 11122322110 011110000
Q ss_pred cc-cccccccccC--cCCCChHHHHHHHHHHHHH-HHhcCCcEEEEccCcchhhhcCCCCCch-hHHHHHHHHHHHHHHh
Q 005843 269 LS-IDCMEMEKYG--IGAIDPDKISQFYDDLHKY-LVSQGVDGVKVDVQNILETICSGLGSRV-SLTRHFQQALEESIAT 343 (674)
Q Consensus 269 ~~-~~~~~~~~~g--~~l~~p~~~~~fy~~~~~~-La~~GVD~VKvD~q~~l~~~~~~~~~~~-~~~~ay~~Al~~s~~~ 343 (674)
-. ....-++..+ +++.+|+ |+++|.+.++. +.+.|||++|.|++-.... ..-+.-.. ..+++.++++++
T Consensus 117 g~~~~~~~w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~~Gvdg~w~D~~Ep~~~-~~~hN~y~~~~~~~~~~~~~~---- 190 (339)
T cd06602 117 GSPYIGKVWPGYTVFPDFLNPN-TQEWWTDEIKDFHDQVPFDGLWIDMNEPSNF-YDVHNLYGLSEAIATYKALQS---- 190 (339)
T ss_pred CCEEEEEeCCCCCcCcCCCCHH-HHHHHHHHHHHHHhcCCCcEEEecCCCCchH-hhhcchhhHHHHHHHHHHHHh----
Confidence 00 0000011111 4667876 67777776665 5668999999998643211 00011011 123344445444
Q ss_pred hCCCCceEEeecCCCCccccccccceEecCCccCCCCC
Q 005843 344 NFKDNSIICCMAQNTDSIFHSKRSAITRASDDYYPKNP 381 (674)
Q Consensus 344 ~f~g~~ii~cMs~~~~~l~~~~~~~~~R~SdDf~p~~~ 381 (674)
.-..|+++.+-|..... .+++. . -|.|....|.
T Consensus 191 ~~~~r~~~~sRs~~~G~---qry~~-~-w~GD~~s~W~ 223 (339)
T cd06602 191 IPGKRPFVISRSTFPGS---GRYAG-H-WLGDNASTWE 223 (339)
T ss_pred cCCCCCEEEEecCcccc---cccce-e-ECCCccCCHH
Confidence 32346778777764321 13332 2 3445555554
No 29
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=98.45 E-value=1.4e-05 Score=94.77 Aligned_cols=233 Identities=18% Similarity=0.268 Sum_probs=145.5
Q ss_pred EEEEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEe
Q 005843 81 AVFVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIID 160 (674)
Q Consensus 81 ~v~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viID 160 (674)
-.+|..|.+|-++++++..+. |+ +.-+|.|. +| |.|-+.+..-+|+.+.+.++.+++..||+..|.+|
T Consensus 235 dyyv~~G~~~~~vi~~yt~lT----Gk-----p~l~P~Wa--~G-~~~~~~~~~~~e~~v~~~i~~~~~~~IP~d~~~lD 302 (772)
T COG1501 235 DYYVIAGPTPKDVLEKYTDLT----GK-----PPLPPKWA--LG-WLWTSRYTYYDEDEVLEFIDEMRERDIPLDVFVLD 302 (772)
T ss_pred EEEEEeCCCHHHHHHHHHHhh----CC-----CCCCCcee--cC-CCceeccccccHHHHHHHHhhcccccCcceEEEEe
Confidence 478889999877777766633 22 23466665 66 67777777889999999999999999999999999
Q ss_pred cC-cccCCCCCcCCCCCCccccccCCcccCcccc-CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCC
Q 005843 161 DG-WQDTTNEFQIEGEPFAEGTQFGGRLASIKEN-NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGG 238 (674)
Q Consensus 161 DG-Wq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n-~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgG 238 (674)
-. |-+. +..|+-| .+|| ..+.+++++|+ .|+| +-+|.-|.
T Consensus 303 ~~~~~~~--------------------~~~F~wd~~~FP-----------~pk~mi~~l~~-~Gik-l~~~i~P~----- 344 (772)
T COG1501 303 IDFWMDN--------------------WGDFTWDPDRFP-----------DPKQMIAELHE-KGIK-LIVIINPY----- 344 (772)
T ss_pred ehhhhcc--------------------ccceEECcccCC-----------CHHHHHHHHHh-cCce-EEEEeccc-----
Confidence 97 7651 3345545 4899 67899999999 7999 55776663
Q ss_pred cccCCcCcccccCcccccCCCCCCcccCCc---cccccccccccC--cCCCChHHHHHHHH-HHHHHHHhcCCcEEEEcc
Q 005843 239 LVLNSSGTKMYNPEMKYPVQSPGNLANMRD---LSIDCMEMEKYG--IGAIDPDKISQFYD-DLHKYLVSQGVDGVKVDV 312 (674)
Q Consensus 239 I~p~~~~~~~y~~~~~~p~~~~g~~~~~pd---~~~~~~~~~~~g--~~l~~p~~~~~fy~-~~~~~La~~GVD~VKvD~ 312 (674)
|..+.+ .|+... ..|.+...|+ +-++. ++..+ ++..+| ++++||. ..++.|.+.|||++|.|+
T Consensus 345 i~~d~~---~~~e~~-----~~Gy~~k~~~g~~~~~~~--w~~~~a~~DFtnp-~~r~Ww~~~~~~~l~d~Gv~g~W~D~ 413 (772)
T COG1501 345 IKQDSP---LFKEAI-----EKGYFVKDPDGEIYQADF--WPGNSAFPDFTNP-DAREWWASDKKKNLLDLGVDGFWNDM 413 (772)
T ss_pred cccCCc---hHHHHH-----HCCeEEECCCCCEeeecc--cCCcccccCCCCH-HHHHHHHHHHHhHHHhcCccEEEccC
Confidence 555543 222211 1132222222 11111 11111 456777 5777777 788899999999999999
Q ss_pred Ccchhhhc--CCCCCch---------hHHHHHHHHHHHHHHhhCCCCceEEeecCCCCccccccccceEecCCccCCCCC
Q 005843 313 QNILETIC--SGLGSRV---------SLTRHFQQALEESIATNFKDNSIICCMAQNTDSIFHSKRSAITRASDDYYPKNP 381 (674)
Q Consensus 313 q~~l~~~~--~~~~~~~---------~~~~ay~~Al~~s~~~~f~g~~ii~cMs~~~~~l~~~~~~~~~R~SdDf~p~~~ 381 (674)
+--.-..+ .+.+... -.++++++|+++. . -..|++|.+-|.....- ..+.+| |.|.-..|.
T Consensus 414 nEp~~~~~~~~~~g~~~~~~~N~yp~~~~~a~~~~~~~~-~--~~~r~~~lsRsg~aG~Q---~~~~~W--sGD~~s~wd 485 (772)
T COG1501 414 NEPEPFDGDGFGNGIDHEEMHNLYPLLYAKAVYEALKEL-G--GNERPFILSRSGYAGSQ---RYAAHW--SGDNRSSWD 485 (772)
T ss_pred CCCccccccccccccCHHHHhcchhHHHHHHHHHHHHhh-c--CCCceEEEEecccccce---ecccee--CCccccchH
Confidence 85432211 1112221 1355666666652 1 12577888888764321 222222 556666664
Q ss_pred C
Q 005843 382 T 382 (674)
Q Consensus 382 ~ 382 (674)
.
T Consensus 486 ~ 486 (772)
T COG1501 486 S 486 (772)
T ss_pred H
Confidence 3
No 30
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=98.43 E-value=3.5e-06 Score=90.65 Aligned_cols=190 Identities=12% Similarity=0.131 Sum_probs=110.9
Q ss_pred cCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccccC
Q 005843 115 QLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENN 194 (674)
Q Consensus 115 ~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~ 194 (674)
-+|.+.=++-.|.|. | -|+++|++.++.+++.++|+..+.||++|++..++ + .| ..+
T Consensus 5 lpP~walG~~~sr~~-y---~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~-----------------f-~~-d~~ 61 (317)
T cd06600 5 LPPMWALGYHISRYS-Y---YPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRL-----------------F-TW-DPY 61 (317)
T ss_pred CCchHHHHHHhcCCC-C---CCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCc-----------------e-ee-chh
Confidence 456666667778875 2 37899999999999999999999999999864332 1 23 245
Q ss_pred CCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCccc-ccc
Q 005843 195 KFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLS-IDC 273 (674)
Q Consensus 195 KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~-~~~ 273 (674)
+|| ..+.+++++|+ .|+| +-+|+.+. |.+++. ...|+... ..|.+...++-. ...
T Consensus 62 ~FP-----------dp~~~i~~l~~-~g~k-~~~~~~P~-----i~~~~~-~~~~~~~~-----~~~~~v~~~~g~~~~~ 117 (317)
T cd06600 62 RFP-----------EPKKLIDELHK-RNVK-LVTIVDPG-----IRVDQN-YSPFLSGM-----DKGKFCEIESGELFVG 117 (317)
T ss_pred cCC-----------CHHHHHHHHHH-CCCE-EEEEeecc-----ccCCCC-ChHHHHHH-----HCCEEEECCCCCeEEE
Confidence 899 67999999999 6999 67887763 554421 12222111 001111111000 000
Q ss_pred ccccccC--cCCCChHHHHHHHHHHHHHH-HhcCCcEEEEccCcchhhhcCCCCCc-hhHHHHHHHHHHHHHHhhCC-CC
Q 005843 274 MEMEKYG--IGAIDPDKISQFYDDLHKYL-VSQGVDGVKVDVQNILETICSGLGSR-VSLTRHFQQALEESIATNFK-DN 348 (674)
Q Consensus 274 ~~~~~~g--~~l~~p~~~~~fy~~~~~~L-a~~GVD~VKvD~q~~l~~~~~~~~~~-~~~~~ay~~Al~~s~~~~f~-g~ 348 (674)
.-++..+ +++.+|+ ++++|.+.++.+ .+.|||++|.|++-.... ..-+.-. ....++.++++++ .++ .|
T Consensus 118 ~~w~G~~~~~Dftnp~-a~~ww~~~~~~~~~~~gvdg~w~D~~Ep~~~-~~~hn~y~~~~~~a~~~~~~~----~~~~~r 191 (317)
T cd06600 118 KMWPGTTVYPDFTNPD-TREWWAGLFSEWLNSQGVDGIWLDMNEPSDF-EKVHNLYGLYEAMATAEGFRT----SHPRNR 191 (317)
T ss_pred eecCCCccccCCCChH-HHHHHHHHHHHHhhcCCCceEEeeCCCCccH-HHhcchhhHHHHHHHHHHHHH----hcCCCC
Confidence 0011111 4667775 666776666555 589999999998642111 0001111 1123444455443 443 56
Q ss_pred ceEEeecCC
Q 005843 349 SIICCMAQN 357 (674)
Q Consensus 349 ~ii~cMs~~ 357 (674)
+++.+-|..
T Consensus 192 ~~~~sRs~~ 200 (317)
T cd06600 192 IFILTRSGF 200 (317)
T ss_pred ceEEEeccc
Confidence 788777764
No 31
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=98.37 E-value=1.3e-05 Score=96.44 Aligned_cols=170 Identities=18% Similarity=0.242 Sum_probs=108.8
Q ss_pred CCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccC
Q 005843 87 GDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDT 166 (674)
Q Consensus 87 g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~ 166 (674)
|.+|.++++++.++. |+ ..-+|.|.=++-+|.|.. -|++.|++.++.+++.+||+..+.||..|+..
T Consensus 163 gptp~eVi~~Yt~LT----Gr-----p~mpP~WALGy~qSR~~Y----~sq~eV~eva~~fre~~IP~DvIwlDidYm~g 229 (978)
T PLN02763 163 FPSPEALLTSLSHAI----GT-----VFMPPKWALGYQQCRWSY----ESAKRVAEIARTFREKKIPCDVVWMDIDYMDG 229 (978)
T ss_pred CCCHHHHHHHHHHHh----CC-----CCCCchHHhheeeccCCC----CCHHHHHHHHHHHHHcCCCceEEEEehhhhcC
Confidence 478899999888755 22 234677776777888852 37899999999999999999999999999753
Q ss_pred CCCCcCCCCCCccccccCCcccCcccc-CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcC
Q 005843 167 TNEFQIEGEPFAEGTQFGGRLASIKEN-NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSG 245 (674)
Q Consensus 167 ~~d~~~~~~~~~~g~~~~~~L~~~~~n-~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~ 245 (674)
.+ .|.-| ++|| ..+.+++++|+ .|+|. +|..-. ||..+. +
T Consensus 230 ~~--------------------~FTwD~~rFP-----------dP~~mv~~Lh~-~G~kv--v~iidP----gI~~d~-g 270 (978)
T PLN02763 230 FR--------------------CFTFDKERFP-----------DPKGLADDLHS-IGFKA--IWMLDP----GIKAEE-G 270 (978)
T ss_pred CC--------------------ceeECcccCC-----------CHHHHHHHHHH-CCCEE--EEEEcC----CCccCC-C
Confidence 22 23333 5899 67999999999 79994 453221 454321 1
Q ss_pred cccccCcccccCCCCCCcccCCccc-ccccccccc-C-cCCCChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 246 TKMYNPEMKYPVQSPGNLANMRDLS-IDCMEMEKY-G-IGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 246 ~~~y~~~~~~p~~~~g~~~~~pd~~-~~~~~~~~~-g-~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
...|++.+. .+.+...++-. ....-++.. . .++.+| ++++||.++++.|.+.|||+++.|++-
T Consensus 271 Y~~y~eg~~-----~~~fvk~~~G~~y~G~vWpG~~~fpDFTnP-~ar~WW~~~~k~l~d~GVDG~W~DmnE 336 (978)
T PLN02763 271 YFVYDSGCE-----NDVWIQTADGKPFVGEVWPGPCVFPDFTNK-KTRSWWANLVKDFVSNGVDGIWNDMNE 336 (978)
T ss_pred CHHHHhHhh-----cCeeEECCCCCeeEeeecCCCccccCCCCH-HHHHHHHHHHHHHhcCCCcEEEccCCC
Confidence 122322110 00000000000 000001111 1 355666 578899999999999999999999974
No 32
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=98.29 E-value=5.4e-06 Score=89.70 Aligned_cols=127 Identities=19% Similarity=0.247 Sum_probs=91.5
Q ss_pred cCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCcccc-
Q 005843 115 QLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKEN- 193 (674)
Q Consensus 115 ~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n- 193 (674)
-+|-|.=++-.|.|.. -|+++|++.++.+++.+||+..+.||+.|+...+ +|.-|
T Consensus 5 mpP~WalG~~qsr~~Y----~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~--------------------~Ft~d~ 60 (332)
T cd06601 5 LKPRYALGFHQGCYGY----SNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYR--------------------TFTTNG 60 (332)
T ss_pred CCchHHhhhhhCCCCC----CCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCC--------------------ceeecC
Confidence 3566666677787743 3889999999999999999999999999996443 23433
Q ss_pred CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCcccccc
Q 005843 194 NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDC 273 (674)
Q Consensus 194 ~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~ 273 (674)
++|| ..+.++++||+ .|+| +.+|.-+. |. |.. +.| .++ .-
T Consensus 61 ~~FP-----------dp~~mv~~L~~-~G~k-lv~~i~P~-----i~--------~g~--~~~--~~~---~~------- 100 (332)
T cd06601 61 GGFP-----------NPKEMFDNLHN-KGLK-CSTNITPV-----IS--------YGG--GLG--SPG---LY------- 100 (332)
T ss_pred CCCC-----------CHHHHHHHHHH-CCCe-EEEEecCc-----ee--------cCc--cCC--CCc---ee-------
Confidence 5899 67999999998 7999 55764442 22 111 001 001 01
Q ss_pred ccccccCcCCCChHHHHHHHHHHHHHHHhcCCcEEEEccC
Q 005843 274 MEMEKYGIGAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQ 313 (674)
Q Consensus 274 ~~~~~~g~~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q 313 (674)
.++.+| ++++||.+.++.|.+.|||+++.|++
T Consensus 101 -------pDftnp-~ar~wW~~~~~~l~~~Gv~~~W~Dmn 132 (332)
T cd06601 101 -------PDLGRP-DVREWWGNQYKYLFDIGLEFVWQDMT 132 (332)
T ss_pred -------eCCCCH-HHHHHHHHHHHHHHhCCCceeecCCC
Confidence 234555 57789999999999999999999986
No 33
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=98.20 E-value=1.5e-05 Score=86.48 Aligned_cols=151 Identities=15% Similarity=0.187 Sum_probs=96.3
Q ss_pred ccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCcccc
Q 005843 114 KQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKEN 193 (674)
Q Consensus 114 k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n 193 (674)
.-+|.+.=++-+|.|.. -|+++|++.++.+++.+||+..+.||++|+...++ + .| ..
T Consensus 4 ~lpP~walG~~~sr~~y----~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~-----------------f-~~-d~ 60 (339)
T cd06603 4 PLPPLFSLGYHQCRWNY----KDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRY-----------------F-TW-DK 60 (339)
T ss_pred CCCchHHHHHHhcCCCC----CCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCc-----------------e-Ee-Cc
Confidence 34566766677777652 48999999999999999999999999999864332 1 23 24
Q ss_pred CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCc---cc
Q 005843 194 NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRD---LS 270 (674)
Q Consensus 194 ~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd---~~ 270 (674)
+||| ..+.+++++|+ .|+| +-+|..+. |.++. ....|+.... .|.+...++ ..
T Consensus 61 ~~FP-----------dp~~mi~~L~~-~G~k-~~~~~~P~-----v~~~~-~~~~y~e~~~-----~g~~vk~~~g~~~~ 116 (339)
T cd06603 61 KKFP-----------DPEKMQEKLAS-KGRK-LVTIVDPH-----IKRDD-GYYVYKEAKD-----KGYLVKNSDGGDFE 116 (339)
T ss_pred ccCC-----------CHHHHHHHHHH-CCCE-EEEEecCc-----eecCC-CCHHHHHHHH-----CCeEEECCCCCEEE
Confidence 5899 78999999999 7999 67887763 54431 1123433210 011111110 00
Q ss_pred ccccccccc--CcCCCChHHHHHHHHHHHHHHH---hcCCcEEEEccCc
Q 005843 271 IDCMEMEKY--GIGAIDPDKISQFYDDLHKYLV---SQGVDGVKVDVQN 314 (674)
Q Consensus 271 ~~~~~~~~~--g~~l~~p~~~~~fy~~~~~~La---~~GVD~VKvD~q~ 314 (674)
... ++.. =+++.+|+ |++||.+.++.+. +.|+|+++.|++-
T Consensus 117 ~~~--w~g~~~~~Dftnp~-a~~ww~~~~~~~~~~~~~g~~g~w~D~~E 162 (339)
T cd06603 117 GWC--WPGSSSWPDFLNPE-VRDWWASLFSYDKYKGSTENLYIWNDMNE 162 (339)
T ss_pred EEE--CCCCcCCccCCChh-HHHHHHHHHHHHhhcccCCCceEEeccCC
Confidence 000 1111 14567775 6777777777665 4799999999864
No 34
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=98.03 E-value=3.6e-05 Score=80.67 Aligned_cols=125 Identities=18% Similarity=0.276 Sum_probs=78.2
Q ss_pred ccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCC
Q 005843 130 AFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSG 209 (674)
Q Consensus 130 a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~G 209 (674)
.|-..+|-+..++-+|.+++.|++ |++||+||.....+.. .++ .+.-|. ..
T Consensus 24 ~~~~g~~t~~~k~yIDfAa~~G~e--YvlvD~GW~~~~~~~~----------------~d~--~~~~~~---------~d 74 (273)
T PF10566_consen 24 GFKHGATTETQKRYIDFAAEMGIE--YVLVDAGWYGWEKDDD----------------FDF--TKPIPD---------FD 74 (273)
T ss_dssp SS-BSSSHHHHHHHHHHHHHTT-S--EEEEBTTCCGS--TTT------------------T--T-B-TT-----------
T ss_pred CCcCCCCHHHHHHHHHHHHHcCCC--EEEecccccccccccc----------------ccc--cccCCc---------cC
Confidence 345578999999999999999999 9999999987332211 011 112221 47
Q ss_pred hHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCccccccccccccCcCCCChHHH
Q 005843 210 LKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDPDKI 289 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p~~~ 289 (674)
|+.|+++.|+ .|++ |-+|..-.++|+.. + | + -
T Consensus 75 l~elv~Ya~~-KgVg-i~lw~~~~~~~~~~-~-------~-------------------------------------~-~ 106 (273)
T PF10566_consen 75 LPELVDYAKE-KGVG-IWLWYHSETGGNVA-N-------L-------------------------------------E-K 106 (273)
T ss_dssp HHHHHHHHHH-TT-E-EEEEEECCHTTBHH-H-------H-------------------------------------H-C
T ss_pred HHHHHHHHHH-cCCC-EEEEEeCCcchhhH-h-------H-------------------------------------H-H
Confidence 9999999999 5998 77884322222110 0 0 0 0
Q ss_pred HHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHH
Q 005843 290 SQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIA 342 (674)
Q Consensus 290 ~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~ 342 (674)
+ .++.++.+++|||.+||+|+... ......+-|++.+++++.
T Consensus 107 -~-~~~~f~~~~~~Gv~GvKidF~~~---------d~Q~~v~~y~~i~~~AA~ 148 (273)
T PF10566_consen 107 -Q-LDEAFKLYAKWGVKGVKIDFMDR---------DDQEMVNWYEDILEDAAE 148 (273)
T ss_dssp -C-HHHHHHHHHHCTEEEEEEE--SS---------TSHHHHHHHHHHHHHHHH
T ss_pred -H-HHHHHHHHHHcCCCEEeeCcCCC---------CCHHHHHHHHHHHHHHHH
Confidence 1 25677889999999999998542 234567778888888543
No 35
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=97.51 E-value=0.0033 Score=73.84 Aligned_cols=176 Identities=20% Similarity=0.282 Sum_probs=110.9
Q ss_pred EEEEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEe
Q 005843 81 AVFVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIID 160 (674)
Q Consensus 81 ~v~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viID 160 (674)
.+++..|..|..+++++.+.+-+ +-..|-|-=++.-|-|. -.+.+.+++-++.+.+.|||...+.+|
T Consensus 267 D~y~flGptPe~vvqQy~q~iG~---------P~m~pYWslGf~~~Rwg----Y~nls~~~dvv~~~~~agiPld~~~~D 333 (805)
T KOG1065|consen 267 DFYVFLGPTPEGVVQQYLQLIGR---------PAMPPYWSLGFQLCRWG----YKNLSVVRDVVENYRAAGIPLDVIVID 333 (805)
T ss_pred EEEEecCCChHHHHHHHHHHhCC---------ccCCchhhccceecccc----cccHHHHHHHHHHHHHcCCCcceeeee
Confidence 46777889999999999987633 12244333334444443 467788999999999999999999999
Q ss_pred cCcccCCCCCcCCCCCCccccccCCcccCcccc-CCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCc
Q 005843 161 DGWQDTTNEFQIEGEPFAEGTQFGGRLASIKEN-NKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGL 239 (674)
Q Consensus 161 DGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n-~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI 239 (674)
+-|++..+| |..| .+|| +|+.+++.||+ .|+|+| +|.-+ +|
T Consensus 334 iDyMd~ykD--------------------FTvd~~~fp-----------~~~~fv~~Lh~-~G~kyv-liidP-----~i 375 (805)
T KOG1065|consen 334 IDYMDGYKD--------------------FTVDKVWFP-----------DLKDFVDDLHA-RGFKYV-LIIDP-----FI 375 (805)
T ss_pred hhhhhcccc--------------------eeeccccCc-----------chHHHHHHHHh-CCCeEE-EEeCC-----cc
Confidence 999987664 3444 4899 69999999999 799976 66665 35
Q ss_pred ccCCcCcccccCccc---ccCCCCCCcccCCccccccccccc--cCcCCCChHHHHHHHHHHHHHHH-hcCCcEEEEccC
Q 005843 240 VLNSSGTKMYNPEMK---YPVQSPGNLANMRDLSIDCMEMEK--YGIGAIDPDKISQFYDDLHKYLV-SQGVDGVKVDVQ 313 (674)
Q Consensus 240 ~p~~~~~~~y~~~~~---~p~~~~g~~~~~pd~~~~~~~~~~--~g~~l~~p~~~~~fy~~~~~~La-~~GVD~VKvD~q 313 (674)
+-++. ...|+..+. .-..+-| ++++-.+. ++. .=.+.++|. +..||.+-.+.|. +-++|++++|++
T Consensus 376 s~~~~-y~~y~~g~~~~v~I~~~~g----~~~~lg~v--wP~~~~fpDftnp~-~~~Ww~~~~~~fh~~vp~dg~wiDmn 447 (805)
T KOG1065|consen 376 STNSS-YGPYDRGVAKDVLIKNREG----SPKMLGEV--WPGSTAFPDFTNPA-VVEWWLDELKRFHDEVPFDGFWIDMN 447 (805)
T ss_pred ccCcc-chhhhhhhhhceeeecccC----chhhhccc--CCCcccccccCCch-HHHHHHHHHHhhcccCCccceEEECC
Confidence 55443 112332221 0000001 01100000 111 013456774 5566655555554 469999999996
Q ss_pred cc
Q 005843 314 NI 315 (674)
Q Consensus 314 ~~ 315 (674)
-.
T Consensus 448 E~ 449 (805)
T KOG1065|consen 448 EP 449 (805)
T ss_pred Cc
Confidence 53
No 36
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=92.14 E-value=4.7 Score=47.58 Aligned_cols=152 Identities=14% Similarity=0.173 Sum_probs=74.1
Q ss_pred cccccccccccccCHHHHHHHH-HHHHhCCCCccEEEE-ecCcccCCCCCcCCCCCCccccccCCcccCc-cccCCCCCC
Q 005843 123 FGWCTWDAFYQEVNPQGIKDGL-KSLSEGGTPAKFLII-DDGWQDTTNEFQIEGEPFAEGTQFGGRLASI-KENNKFRGT 199 (674)
Q Consensus 123 ~GWcTW~a~~~~vte~~i~~~~-~~l~~~Gi~~~~viI-DDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~-~~n~KFp~~ 199 (674)
+..-||. ..-|-.+|.+.+ +.|++.|+. .|.| --..+...+.. |++ -.++ ..+.+|..
T Consensus 144 ~hv~~~~---~~g~~~~i~~~l~dyl~~LGvt--~i~L~Pi~e~~~~~~w---------GY~----~~~y~~~~~~~Gt- 204 (613)
T TIGR01515 144 LHLGSWR---HGLSYRELADQLIPYVKELGFT--HIELLPVAEHPFDGSW---------GYQ----VTGYYAPTSRFGT- 204 (613)
T ss_pred Eehhhcc---CCCCHHHHHHHHHHHHHHcCCC--EEEECCcccCCCCCCC---------CCC----cccCcccccccCC-
Confidence 4444553 236678888885 999999998 4433 11111100000 110 1111 23456652
Q ss_pred CCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCcccccccccccc
Q 005843 200 TGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKY 279 (674)
Q Consensus 200 ~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~ 279 (674)
+..||.+|+.+|+ .||+ |-+..-+.- ..++......+...-.+....+ .....+.|. . .
T Consensus 205 -------~~dlk~lV~~~H~-~Gi~-VilD~V~NH----~~~~~~~~~~~~~~~~y~~~~~-~~~~~~~w~--~-----~ 263 (613)
T TIGR01515 205 -------PDDFMYFVDACHQ-AGIG-VILDWVPGH----FPKDDHGLAEFDGTPLYEHKDP-RDGEHWDWG--T-----L 263 (613)
T ss_pred -------HHHHHHHHHHHHH-CCCE-EEEEecccC----cCCccchhhccCCCcceeccCC-ccCcCCCCC--C-----c
Confidence 3589999999999 7999 556644321 1122111111111000000000 000111111 0 0
Q ss_pred CcCCCChHHHHHHHHHHHHHH-HhcCCcEEEEccCcc
Q 005843 280 GIGAIDPDKISQFYDDLHKYL-VSQGVDGVKVDVQNI 315 (674)
Q Consensus 280 g~~l~~p~~~~~fy~~~~~~L-a~~GVD~VKvD~q~~ 315 (674)
.+.+-+| .+++|+-+..+++ .+.|||++.+|+...
T Consensus 264 ~~~~~~~-~Vr~~l~~~~~~W~~ey~iDG~R~D~v~~ 299 (613)
T TIGR01515 264 IFDYGRP-EVRNFLVANALYWAEFYHIDGLRVDAVAS 299 (613)
T ss_pred eecCCCH-HHHHHHHHHHHHHHHHhCCcEEEEcCHHH
Confidence 1333445 5677766666655 568999999998543
No 37
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=88.10 E-value=5.6 Score=41.79 Aligned_cols=50 Identities=16% Similarity=0.305 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCChHHHHHHH
Q 005843 138 QGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSGLKDFVLDI 217 (674)
Q Consensus 138 ~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~GL~~lv~~I 217 (674)
..+.+.++..++..+|.+|+|-+||.+..- ..|+.+++++
T Consensus 45 ~~a~~~~~~y~~~~~plgw~lpndgyg~~y----------------------------------------~~l~~~~~~~ 84 (261)
T cd06596 45 DDARKVADKYKENDMPLGWMLPNDGYGCGY----------------------------------------ENLKEVVDYL 84 (261)
T ss_pred hhHHHHHHHHHhcCCCceeeccCCCCcchH----------------------------------------HHHHHHHHHH
Confidence 457788899999999999999999987531 1589999999
Q ss_pred HHhCCCcEEEEE
Q 005843 218 KKNFCLKYVYVW 229 (674)
Q Consensus 218 ~~~~Glk~vgvW 229 (674)
++ .|++ .|+|
T Consensus 85 ~~-~g~~-~glw 94 (261)
T cd06596 85 HA-NGVE-TGLW 94 (261)
T ss_pred HH-cCCc-cccc
Confidence 98 7999 7887
No 38
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=86.55 E-value=21 Score=38.79 Aligned_cols=130 Identities=13% Similarity=0.180 Sum_probs=78.1
Q ss_pred CHHHHHHHHHHHHhCCCCccEEEEec----CcccCCCCCcCCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCChH
Q 005843 136 NPQGIKDGLKSLSEGGTPAKFLIIDD----GWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSGLK 211 (674)
Q Consensus 136 te~~i~~~~~~l~~~Gi~~~~viIDD----GWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~GL~ 211 (674)
+++.+.+.++.+.+.++. .||||= |.-.-..+. .. .....+..++. ..++
T Consensus 11 ~~~~~~~~~~~i~~t~lN--avVIDvKdd~G~i~y~s~~-----------~~---~~~~ga~~~~i----------~D~~ 64 (316)
T PF13200_consen 11 SPERLDKLLDLIKRTELN--AVVIDVKDDDGNITYDSQV-----------PL---AREIGAVKPYI----------KDLK 64 (316)
T ss_pred CHHHHHHHHHHHHhcCCc--eEEEEEecCCceEEecCCC-----------ch---hhhcccccccc----------cCHH
Confidence 557888899999999999 999972 221110000 00 00111222332 5899
Q ss_pred HHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCccccccc---ccc-ccCcCCCCh-
Q 005843 212 DFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCM---EME-KYGIGAIDP- 286 (674)
Q Consensus 212 ~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~---~~~-~~g~~l~~p- 286 (674)
.+++.+|+ .||. +=-|...| -|... ...+|+|++... .+. ..|...++|
T Consensus 65 ~l~~~l~e-~gIY-~IARIv~F-------kD~~l-----------------a~~~pe~av~~~~G~~w~d~~~~~WvnP~ 118 (316)
T PF13200_consen 65 ALVKKLKE-HGIY-PIARIVVF-------KDPVL-----------------AEAHPEWAVKTKDGSVWRDNEGEAWVNPY 118 (316)
T ss_pred HHHHHHHH-CCCE-EEEEEEEe-------cChHH-----------------hhhChhhEEECCCCCcccCCCCCccCCCC
Confidence 99999999 6987 32333321 12111 122477766330 011 123444555
Q ss_pred -HHHHHHHHHHHHHHHhcCCcEEEEccCcchh
Q 005843 287 -DKISQFYDDLHKYLVSQGVDGVKVDVQNILE 317 (674)
Q Consensus 287 -~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~ 317 (674)
+.+.+|--++.+.+++.|||-|-.|..+.=+
T Consensus 119 ~~evw~Y~i~IA~Eaa~~GFdEIqfDYIRFP~ 150 (316)
T PF13200_consen 119 SKEVWDYNIDIAKEAAKLGFDEIQFDYIRFPD 150 (316)
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEeeeeecCC
Confidence 5788888899999999999999999887533
No 39
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=75.91 E-value=19 Score=42.69 Aligned_cols=157 Identities=18% Similarity=0.309 Sum_probs=94.2
Q ss_pred EEEEEeCCChHHHHHHHHHHHHHHhcCCCccccccCCCccccccc--ccccccccccCHHHHHHHHHHHHhCCCCccEEE
Q 005843 81 AVFVNFGDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGW--CTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLI 158 (674)
Q Consensus 81 ~v~v~~g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GW--cTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~vi 158 (674)
-+++..|..|-++++++..+. |+ ..+|.++. +|| |-||. .+|+.|++-=+.+.++.||+..+=
T Consensus 328 DvFi~lGP~~~Dv~~qyaaLT----G~------~~LPplFs-iGYHQcRWNY----~DE~DV~~Vd~~FDehdiP~DviW 392 (915)
T KOG1066|consen 328 DVFIFLGPKPSDVFRQYAALT----GT------TPLPPLFS-IGYHQCRWNY----NDEEDVLTVDQGFDEHDIPYDVIW 392 (915)
T ss_pred EEEEEeCCChhHHHHHHHhhc----CC------CCCCchhh-cchhhccccc----cchhhhhhhhcCccccCCccceEE
Confidence 367788999988888876643 22 23565554 666 88873 578888888889999999988777
Q ss_pred EecCcccCCCCCcCCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCChHHHHHHHHHhCCCcEEEEEeeccCccCC
Q 005843 159 IDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSGLKDFVLDIKKNFCLKYVYVWHALMGYWGG 238 (674)
Q Consensus 159 IDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~GL~~lv~~I~~~~Glk~vgvWha~~GyWgG 238 (674)
+|--.-+..+ .-.| +..|||+ =+.+++++.+ .|=|.|.|
T Consensus 393 LDIEhtdgKr------------------YFTW-Dk~~FP~-----------P~~Ml~kLa~-kgRklV~I---------- 431 (915)
T KOG1066|consen 393 LDIEHTDGKR------------------YFTW-DKHKFPN-----------PKDMLKKLAS-KGRKLVTI---------- 431 (915)
T ss_pred EeeeecCCce------------------eEee-ccccCCC-----------HHHHHHHHHh-cCCceEEE----------
Confidence 7765443322 2123 3469994 3788888988 58776654
Q ss_pred cccCCcCcccccCc------ccccCCCCCCcccCCccccccccccccCcCCCChHHHHHHHHHHHHH
Q 005843 239 LVLNSSGTKMYNPE------MKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDPDKISQFYDDLHKY 299 (674)
Q Consensus 239 I~p~~~~~~~y~~~------~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p~~~~~fy~~~~~~ 299 (674)
|.|.-+--..|.-+ -.+-+.+.|+-- ..|||.. .-.-++..+| .+++||.+++++
T Consensus 432 vDPHIKkD~~Y~v~ke~~~~gy~VKd~~G~Dy--eG~CWPG---~S~yiDf~nP-~~r~wW~~~faf 492 (915)
T KOG1066|consen 432 VDPHIKKDDGYFVHKEAKDKGYYVKDRDGSDY--EGWCWPG---SSSYIDFINP-EARKWWKSQFAF 492 (915)
T ss_pred eCcccccCCCeEEhHHhhhCCeEEEecCCCcc--cccccCC---CcccccccCH-HHHHHHhhhccc
Confidence 45543222223211 011112223221 2234432 0011466777 589999998875
No 40
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=74.20 E-value=29 Score=40.59 Aligned_cols=34 Identities=24% Similarity=0.539 Sum_probs=26.3
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCcEEEEccCcchh
Q 005843 283 AIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNILE 317 (674)
Q Consensus 283 l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~ 317 (674)
+-+| .++++..+..+++.+.|||++-+|+...+.
T Consensus 173 ~~np-~V~~~l~~~~~~W~~~GvDGfRlDa~~~i~ 206 (551)
T PRK10933 173 WENP-AVRAELKKVCEFWADRGVDGLRLDVVNLIS 206 (551)
T ss_pred CCCH-HHHHHHHHHHHHHHHCCCcEEEEcchhhcC
Confidence 3455 567777788888889999999999876553
No 41
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=73.01 E-value=83 Score=33.97 Aligned_cols=145 Identities=14% Similarity=0.141 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCChHHHHH
Q 005843 136 NPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSGLKDFVL 215 (674)
Q Consensus 136 te~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~GL~~lv~ 215 (674)
+++++.+.++.|++.|+. .|+++=-+.+..--++ .+ .+..++..+....+.+-+=|+.+++
T Consensus 17 ~~~~~~~~l~~l~~~~~N--~V~~qVr~~gda~Y~S--------------~~---~p~s~~~~g~~~~~pg~DpL~~~I~ 77 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFN--AVFVQVRPRGDALYPS--------------DI---EPWSGYLTGKQGKDPGFDPLEFMIE 77 (311)
T ss_pred CHHHHHHHHHHHHHcCCC--EEEEEEEeCcEEEecc--------------cc---cccccccCCCCCCCCCccHHHHHHH
Confidence 889999999999999987 6666543321110010 11 1111111000000001124899999
Q ss_pred HHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCccccccccccccCcCCCCh--HHHHHHH
Q 005843 216 DIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDP--DKISQFY 293 (674)
Q Consensus 216 ~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p--~~~~~fy 293 (674)
+.|+ .||+ |--|+.+ ++... ...+..+.+ | ......+|++..... ....+...+|| +++++|.
T Consensus 78 eaHk-rGle-vHAW~~~-----~~~~~-~~~~~~~~~---p---~~~~~~~~~~~~~~~-~~~~~~~~lnP~~PeVr~~i 142 (311)
T PF02638_consen 78 EAHK-RGLE-VHAWFRV-----GFNAP-DVSHILKKH---P---EWFAVNHPGWVRTYE-DANGGYYWLNPGHPEVRDYI 142 (311)
T ss_pred HHHH-cCCE-EEEEEEe-----ecCCC-chhhhhhcC---c---hhheecCCCceeecc-cCCCCceEECCCCHHHHHHH
Confidence 9999 6999 7778732 11111 000111111 1 011112344332110 00112223333 3678887
Q ss_pred HHHHHH-HHhcCCcEEEEccCc
Q 005843 294 DDLHKY-LVSQGVDGVKVDVQN 314 (674)
Q Consensus 294 ~~~~~~-La~~GVD~VKvD~q~ 314 (674)
-++.+- +....||+|-.|..+
T Consensus 143 ~~~v~Eiv~~YdvDGIhlDdy~ 164 (311)
T PF02638_consen 143 IDIVKEIVKNYDVDGIHLDDYF 164 (311)
T ss_pred HHHHHHHHhcCCCCeEEecccc
Confidence 776665 467899999999654
No 42
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=71.99 E-value=83 Score=36.60 Aligned_cols=33 Identities=24% Similarity=0.494 Sum_probs=24.8
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCcEEEEccCcch
Q 005843 283 AIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNIL 316 (674)
Q Consensus 283 l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l 316 (674)
+-+| .++++.-+..+++.+.|||++-+|+...+
T Consensus 170 ~~np-~vr~~l~~~~~~w~~~GvDGfRlDav~~~ 202 (539)
T TIGR02456 170 YDNP-AVHDAVHDVMRFWLDLGVDGFRLDAVPYL 202 (539)
T ss_pred CCCH-HHHHHHHHHHHHHHHcCCCEEEEecHHhh
Confidence 3455 46777777778777899999999986543
No 43
>PRK12568 glycogen branching enzyme; Provisional
Probab=70.53 E-value=1.1e+02 Score=37.12 Aligned_cols=70 Identities=19% Similarity=0.290 Sum_probs=39.8
Q ss_pred CCCChHHHHHHH-HHHHHHHHhcCCcEEEEccCcchhhh----------cCCCCCchh-HHHHHHHHHHHHHHhhCCCCc
Q 005843 282 GAIDPDKISQFY-DDLHKYLVSQGVDGVKVDVQNILETI----------CSGLGSRVS-LTRHFQQALEESIATNFKDNS 349 (674)
Q Consensus 282 ~l~~p~~~~~fy-~~~~~~La~~GVD~VKvD~q~~l~~~----------~~~~~~~~~-~~~ay~~Al~~s~~~~f~g~~ 349 (674)
.+-+|+ ++.|+ +.+.-.|.+.|||++-+|+...+-.+ ....+++.. .+..+-+.|.+.+.+.+|+.-
T Consensus 379 N~~~pe-Vr~~li~~a~~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn~~gg~en~ea~~Fl~~ln~~v~~~~P~~~ 457 (730)
T PRK12568 379 NYGRPE-VTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAHGGRENLEAVAFLRQLNREIASQFPGVL 457 (730)
T ss_pred ccCCHH-HHHHHHHHHHHHHHHhCceEEEEcCHhHhhhhccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeE
Confidence 445565 55555 44555567789999999976443211 111223222 234566667777777888654
Q ss_pred eEE
Q 005843 350 IIC 352 (674)
Q Consensus 350 ii~ 352 (674)
+|.
T Consensus 458 ~IA 460 (730)
T PRK12568 458 TIA 460 (730)
T ss_pred EEE
Confidence 443
No 44
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.
Probab=69.64 E-value=50 Score=35.83 Aligned_cols=70 Identities=19% Similarity=0.130 Sum_probs=40.1
Q ss_pred ccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCChHHH
Q 005843 134 EVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSGLKDF 213 (674)
Q Consensus 134 ~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~GL~~l 213 (674)
.+|+ ...+-.+..+++|.. ++|+-...-+..... +.+.+. +..++..| +|+.+
T Consensus 30 ~~~~-~~~~~y~~rA~gg~g--lii~~~~~v~~~~~~------------~~~~~~-~~~d~~~~-----------~~~~l 82 (336)
T cd02932 30 VATD-WHLVHYGSRALGGAG--LVIVEATAVSPEGRI------------TPGDLG-LWNDEQIE-----------ALKRI 82 (336)
T ss_pred CCCH-HHHHHHHHHHcCCCc--EEEEcceEECCCcCC------------CCCcee-ecCHHHHH-----------HHHHH
Confidence 3564 455666667778877 666655443322110 001111 11222344 99999
Q ss_pred HHHHHHhCCCc-EEEEEee
Q 005843 214 VLDIKKNFCLK-YVYVWHA 231 (674)
Q Consensus 214 v~~I~~~~Glk-~vgvWha 231 (674)
++.+|+ +|-+ .+=+||+
T Consensus 83 ~~~vh~-~G~~~~~QL~H~ 100 (336)
T cd02932 83 VDFIHS-QGAKIGIQLAHA 100 (336)
T ss_pred HHHHHh-cCCcEEEEccCC
Confidence 999999 7966 5667884
No 45
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=68.24 E-value=28 Score=41.19 Aligned_cols=140 Identities=14% Similarity=0.199 Sum_probs=74.9
Q ss_pred CHHHHHHHHHHHHhCCCC-ccEEEE-----ecCcccCCCCCcCCCCCCccccccCCcccCcc-ccCCCCCCCCCCCcCCC
Q 005843 136 NPQGIKDGLKSLSEGGTP-AKFLII-----DDGWQDTTNEFQIEGEPFAEGTQFGGRLASIK-ENNKFRGTTGDDQKETS 208 (674)
Q Consensus 136 te~~i~~~~~~l~~~Gi~-~~~viI-----DDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~-~n~KFp~~~~~~~~~~~ 208 (674)
+-+...+.+..|++.|+. ++++=| |=+|--. - +-+. +.++|- .|.
T Consensus 163 ~~e~a~~llpYl~elG~T~IELMPv~e~p~~~sWGYq----------------~----~g~yAp~sryG--------tPe 214 (628)
T COG0296 163 YFELAIELLPYLKELGITHIELMPVAEHPGDRSWGYQ----------------G----TGYYAPTSRYG--------TPE 214 (628)
T ss_pred HHHHHHHHhHHHHHhCCCEEEEcccccCCCCCCCCCC----------------c----ceeccccccCC--------CHH
Confidence 446778889999999986 233221 2223111 0 0112 334664 457
Q ss_pred ChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCccccccccccccCcCCCChHH
Q 005843 209 GLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDPDK 288 (674)
Q Consensus 209 GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p~~ 288 (674)
+||.+|+..|+ .||--+==| ..++ ..|++.+...|.....+.-..|- ...+++|-.- +..-....
T Consensus 215 dfk~fVD~aH~-~GIgViLD~--V~~H---F~~d~~~L~~fdg~~~~e~~~~~-~~~~~~Wg~~--------i~~~gr~E 279 (628)
T COG0296 215 DFKALVDAAHQ-AGIGVILDW--VPNH---FPPDGNYLARFDGTFLYEHEDPR-RGEHTDWGTA--------IFNYGRNE 279 (628)
T ss_pred HHHHHHHHHHH-cCCEEEEEe--cCCc---CCCCcchhhhcCCccccccCCcc-cccCCCcccc--------hhccCcHH
Confidence 99999999999 797733223 1111 12444444444433222111111 2234444211 11121345
Q ss_pred HHHHH-HHHHHHHHhcCCcEEEEccCcchhh
Q 005843 289 ISQFY-DDLHKYLVSQGVDGVKVDVQNILET 318 (674)
Q Consensus 289 ~~~fy-~~~~~~La~~GVD~VKvD~q~~l~~ 318 (674)
|+.|+ ....-.|.+..||++.+|+...+-.
T Consensus 280 VR~Fll~nal~Wl~~yHiDGlRvDAV~smly 310 (628)
T COG0296 280 VRNFLLANALYWLEEYHIDGLRVDAVASMLY 310 (628)
T ss_pred HHHHHHHHHHHHHHHhCCcceeeehhhhhhc
Confidence 66665 5566678999999999999876543
No 46
>PRK14705 glycogen branching enzyme; Provisional
Probab=67.68 E-value=1.1e+02 Score=39.22 Aligned_cols=70 Identities=17% Similarity=0.235 Sum_probs=39.5
Q ss_pred CCCChHHHHHHHHHHHHH-HHhcCCcEEEEccCcchhhh----------cCCCCCchh-HHHHHHHHHHHHHHhhCCCCc
Q 005843 282 GAIDPDKISQFYDDLHKY-LVSQGVDGVKVDVQNILETI----------CSGLGSRVS-LTRHFQQALEESIATNFKDNS 349 (674)
Q Consensus 282 ~l~~p~~~~~fy~~~~~~-La~~GVD~VKvD~q~~l~~~----------~~~~~~~~~-~~~ay~~Al~~s~~~~f~g~~ 349 (674)
++-++ .++.|+-+-..| +.+.+||++-+|....+-++ ...++++.. .+-.+.+-|.+.+.+.+|+.-
T Consensus 875 n~~~~-eVr~fli~~a~~Wl~eyhiDGfR~Dav~~mly~Dysr~~g~w~pn~~gg~en~~ai~fl~~ln~~v~~~~p~~~ 953 (1224)
T PRK14705 875 DFGRT-EVRNFLVANALYWLDEFHIDGLRVDAVASMLYLDYSREEGQWRPNRFGGRENLEAISFLQEVNATVYKTHPGAV 953 (1224)
T ss_pred cCCCH-HHHHHHHHHHHHHHHHhCCCcEEEeehhhhhhcccccccccccccccCCccChHHHHHHHHHHHHHHHHCCCeE
Confidence 34445 566776555554 56789999999986543221 111233332 234455666666776777543
Q ss_pred eEE
Q 005843 350 IIC 352 (674)
Q Consensus 350 ii~ 352 (674)
+|.
T Consensus 954 ~IA 956 (1224)
T PRK14705 954 MIA 956 (1224)
T ss_pred EEE
Confidence 333
No 47
>PRK10785 maltodextrin glucosidase; Provisional
Probab=67.36 E-value=64 Score=38.09 Aligned_cols=65 Identities=14% Similarity=0.177 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCcc-ccCCCCCCCCCCCcCCCChHHHH
Q 005843 136 NPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIK-ENNKFRGTTGDDQKETSGLKDFV 214 (674)
Q Consensus 136 te~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~-~n~KFp~~~~~~~~~~~GL~~lv 214 (674)
+=++|.+.|+.|+++|+..=|+. ==.++..+ +...-.++. .+..|-. ...|+.||
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~--Pif~s~s~--------------hgYd~~Dy~~iDp~~Gt--------~~df~~Lv 232 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLN--PIFTAPSV--------------HKYDTEDYRHVDPQLGG--------DAALLRLR 232 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeC--CcccCCCC--------------CCcCcccccccCcccCC--------HHHHHHHH
Confidence 45799999999999999832210 00111100 111122332 3445652 25799999
Q ss_pred HHHHHhCCCcE
Q 005843 215 LDIKKNFCLKY 225 (674)
Q Consensus 215 ~~I~~~~Glk~ 225 (674)
+++|+ .|||-
T Consensus 233 ~~aH~-rGikV 242 (598)
T PRK10785 233 HATQQ-RGMRL 242 (598)
T ss_pred HHHHH-CCCEE
Confidence 99999 69993
No 48
>cd02871 GH18_chitinase_D-like GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.
Probab=67.18 E-value=67 Score=34.55 Aligned_cols=64 Identities=17% Similarity=0.312 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCCceEEeecC
Q 005843 286 PDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIATNFKDNSIICCMAQ 356 (674)
Q Consensus 286 p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~ 356 (674)
++.+..|.+.+.+++.++|+|+|=+|.-... ...+..+....+.+.|++ +++.++. ..+.++++
T Consensus 92 ~~~~~~fa~sl~~~~~~~g~DGiDiD~E~~~-----~~~~~~~~~~~~~~~lk~-lr~~~~~-~~~lT~AP 155 (312)
T cd02871 92 TAQEDNFVDSIVAIIKEYGFDGLDIDLESGS-----NPLNATPVITNLISALKQ-LKDHYGP-NFILTMAP 155 (312)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEecccCC-----ccCCcHHHHHHHHHHHHH-HHHHcCC-CeEEEECC
Confidence 5678899999999999999999999986521 111112334556666665 6667743 57777875
No 49
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase. One member of this subgroup, the Sinorhizobium meliloti stachydrine utilization protein stcD, has been idenified as a putative N-methylproline demethylase.
Probab=62.43 E-value=1.3e+02 Score=32.82 Aligned_cols=73 Identities=11% Similarity=0.131 Sum_probs=41.2
Q ss_pred ccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCChHHH
Q 005843 134 EVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSGLKDF 213 (674)
Q Consensus 134 ~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~GL~~l 213 (674)
.+|++ .++--+..+++|.. ++|....+-...... +.+.++-+. +...| +|+.+
T Consensus 30 ~~t~~-~~~~y~~~A~gG~G--lIi~e~~~v~~~~~~------------~~~~~~l~~-d~~i~-----------~~~~l 82 (343)
T cd04734 30 LPSER-YIAYHEERARGGAG--LIITEGSSVHPSDSP------------AFGNLNASD-DEIIP-----------GFRRL 82 (343)
T ss_pred CCCHH-HHHHHHHHHhCCCC--EEEEeeeeeCCcccC------------CCCccccCC-HHHHH-----------HHHHH
Confidence 45654 45666667778887 677665554322211 011121111 22234 99999
Q ss_pred HHHHHHhCCCc-EEEEEeeccCcc
Q 005843 214 VLDIKKNFCLK-YVYVWHALMGYW 236 (674)
Q Consensus 214 v~~I~~~~Glk-~vgvWha~~GyW 236 (674)
++.+|+ +|-+ .+=+||+ |++
T Consensus 83 ~~~vh~-~g~~~~~Ql~H~--G~~ 103 (343)
T cd04734 83 AEAVHA-HGAVIMIQLTHL--GRR 103 (343)
T ss_pred HHHHHh-cCCeEEEeccCC--CcC
Confidence 999999 7854 4567775 544
No 50
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=58.81 E-value=1.6e+02 Score=35.32 Aligned_cols=91 Identities=12% Similarity=0.204 Sum_probs=56.1
Q ss_pred CChHHHHHHHHHhCCCcEEEEEeeccCccCCcccCCcCcccccCcccccCCCCCCcccCCccccccccccccCcCCCChH
Q 005843 208 SGLKDFVLDIKKNFCLKYVYVWHALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDPD 287 (674)
Q Consensus 208 ~GL~~lv~~I~~~~Glk~vgvWha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p~ 287 (674)
.++.+++=.|+.|.|+| |+-|+.+.. |.. .+..+..+.++ +.. +....+|+|.. .+.--+|
T Consensus 380 d~f~~~aw~l~~r~~v~-v~AWmp~~~-~~~-~~~~~~~~~~~-----~~~--~~~~~~~~~~~--------rl~P~~p- 440 (671)
T PRK14582 380 DLFNRVAWQLRTRAGVN-VYAWMPVLS-FDL-DPTLPRVKRLD-----TGE--GKAQIHPEQYR--------RLSPFDD- 440 (671)
T ss_pred CCcCHHHHHHHHhhCCE-EEEecccee-ecc-CCCcchhhhcc-----ccC--CccccCCCCCc--------CCCCCCH-
Confidence 58889888888778999 999988753 211 12211111111 111 11223555421 1333345
Q ss_pred HHHHHHHHHHHHHHhc-CCcEEEEccCcchh
Q 005843 288 KISQFYDDLHKYLVSQ-GVDGVKVDVQNILE 317 (674)
Q Consensus 288 ~~~~fy~~~~~~La~~-GVD~VKvD~q~~l~ 317 (674)
.++++..+++.-|+.. .||+|-.|.-..++
T Consensus 441 e~r~~i~~i~~dla~~~~~dGilf~Dd~~l~ 471 (671)
T PRK14582 441 RVRAQVGMLYEDLAGHAAFDGILFHDDAVLS 471 (671)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEeccccccc
Confidence 5889999999988884 99999999877654
No 51
>PRK05402 glycogen branching enzyme; Provisional
Probab=58.03 E-value=2.6e+02 Score=33.85 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=21.3
Q ss_pred CCCChHHHHHHHHHHHHH-HHhcCCcEEEEccCc
Q 005843 282 GAIDPDKISQFYDDLHKY-LVSQGVDGVKVDVQN 314 (674)
Q Consensus 282 ~l~~p~~~~~fy~~~~~~-La~~GVD~VKvD~q~ 314 (674)
.+-+|+ +++|.-+..++ +.+.|||++-+|...
T Consensus 375 n~~~~~-v~~~l~~~~~~W~~e~~iDG~R~D~v~ 407 (726)
T PRK05402 375 NYGRNE-VRNFLVANALYWLEEFHIDGLRVDAVA 407 (726)
T ss_pred cCCCHH-HHHHHHHHHHHHHHHhCCcEEEECCHH
Confidence 444565 55665554555 567899999999743
No 52
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside []. It is a widely distributed fold which has been found in many enzyme families that catalyse completely unrelated reactions []. The active site is always found at the C-terminal end of this domain. Proteins in this entry are a variety of NADH:flavin oxidoreductase/NADH oxidase enzymes, found mostly in bacteria or fungi, that contain a TIM-barrel fold. They commonly use FMN/FAD as cofactor and include: dimethylamine dehydrogenase trimethylamine dehydrogenase 12-oxophytodienoate reductase NADPH dehydrogenase NADH oxidase ; GO: 0010181 FMN binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3GKA_B 3P67_A 3F03_K 2ABA_A 1VYR_A 1GVO_A 3KFT_B 3P8I_A 1GVQ_A 3P74_A ....
Probab=56.85 E-value=1.9e+02 Score=31.56 Aligned_cols=70 Identities=20% Similarity=0.353 Sum_probs=42.3
Q ss_pred cCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCChHHHH
Q 005843 135 VNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSGLKDFV 214 (674)
Q Consensus 135 vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~GL~~lv 214 (674)
++++...+-....+++|.. ++|+...-=+.... .+...+. +..++..| |+|.++
T Consensus 33 ~~~~~~~~yy~~rA~GG~G--lii~~~~~v~~~~~------------~~~~~~~-i~~d~~i~-----------~~k~l~ 86 (341)
T PF00724_consen 33 VPTDRLIAYYERRAKGGAG--LIITEATAVSPEGR------------GFPGQPG-IWDDEQIP-----------GLKKLA 86 (341)
T ss_dssp BCHHHHHHHHHHHHHTTTS--EEEEEEEESSGGGS------------SSTTSEB-SSSHHHHH-----------HHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCc--eEEecccccccccc------------cccccch-hchhhHHH-----------HHHHHH
Confidence 7788889999999999988 66665532222111 0111121 12223344 999999
Q ss_pred HHHHHhCCCc-EEEEEee
Q 005843 215 LDIKKNFCLK-YVYVWHA 231 (674)
Q Consensus 215 ~~I~~~~Glk-~vgvWha 231 (674)
+.||+ +|-| .+=+||+
T Consensus 87 ~~vh~-~Ga~i~~QL~H~ 103 (341)
T PF00724_consen 87 DAVHA-HGAKIIAQLWHA 103 (341)
T ss_dssp HHHHH-TTSEEEEEEE--
T ss_pred HHHHh-cCccceeecccc
Confidence 99999 7966 3446886
No 53
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=56.28 E-value=1.8e+02 Score=33.93 Aligned_cols=28 Identities=21% Similarity=0.395 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHH-HHhcCCcEEEEccCcc
Q 005843 288 KISQFYDDLHKY-LVSQGVDGVKVDVQNI 315 (674)
Q Consensus 288 ~~~~fy~~~~~~-La~~GVD~VKvD~q~~ 315 (674)
.+++|+-+..++ +.+.|||++-+|....
T Consensus 220 ~vr~~i~~~~~~W~~e~~iDGfR~D~~~~ 248 (542)
T TIGR02402 220 EVRRYILDNALYWLREYHFDGLRLDAVHA 248 (542)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEeCHHH
Confidence 566665554454 5678999999997543
No 54
>PRK14838 undecaprenyl pyrophosphate synthase; Provisional
Probab=55.37 E-value=73 Score=33.28 Aligned_cols=19 Identities=5% Similarity=0.298 Sum_probs=13.4
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
++.+++...+ +|||++.++
T Consensus 43 l~~i~~~~~~-~gI~~lT~Y 61 (242)
T PRK14838 43 VHIITEEAAR-LGVKFLTLY 61 (242)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 4555556666 899998775
No 55
>PLN00196 alpha-amylase; Provisional
Probab=54.32 E-value=1.5e+02 Score=33.57 Aligned_cols=83 Identities=13% Similarity=0.224 Sum_probs=49.5
Q ss_pred CCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccccCCC
Q 005843 117 PGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKF 196 (674)
Q Consensus 117 P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KF 196 (674)
..++.+|-|.+|..-+. .-+.|.+.|+.|++.|+..=| ..+..... ...|+.. ..+.++. +++|
T Consensus 25 ~v~~Q~F~W~~~~~~gg--~~~~i~~kldyL~~LGvtaIW-------L~P~~~s~-----s~hGY~~-~D~y~ld-~~~f 88 (428)
T PLN00196 25 QVLFQGFNWESWKQNGG--WYNFLMGKVDDIAAAGITHVW-------LPPPSHSV-----SEQGYMP-GRLYDLD-ASKY 88 (428)
T ss_pred CEEEEeeccCCCCCCCc--CHHHHHHHHHHHHHcCCCEEE-------eCCCCCCC-----CCCCCCc-cccCCCC-cccC
Confidence 46778899999876443 356799999999999997222 11111000 0012211 1121111 2466
Q ss_pred CCCCCCCCcCCCChHHHHHHHHHhCCCc
Q 005843 197 RGTTGDDQKETSGLKDFVLDIKKNFCLK 224 (674)
Q Consensus 197 p~~~~~~~~~~~GL~~lv~~I~~~~Glk 224 (674)
-.. ..|+.+|+.+|+ .|||
T Consensus 89 Gt~--------~elk~Lv~~aH~-~GIk 107 (428)
T PLN00196 89 GNE--------AQLKSLIEAFHG-KGVQ 107 (428)
T ss_pred CCH--------HHHHHHHHHHHH-CCCE
Confidence 421 479999999999 7999
No 56
>PRK14839 undecaprenyl pyrophosphate synthase; Provisional
Probab=52.49 E-value=92 Score=32.50 Aligned_cols=19 Identities=5% Similarity=0.183 Sum_probs=13.8
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
++.+++...+ +|||++.++
T Consensus 42 l~~i~~~c~~-~GI~~lTvY 60 (239)
T PRK14839 42 IRRVVEAAPD-LGIGTLTLY 60 (239)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 4555666676 899998775
No 57
>PRK14833 undecaprenyl pyrophosphate synthase; Provisional
Probab=51.82 E-value=1.2e+02 Score=31.57 Aligned_cols=19 Identities=11% Similarity=0.263 Sum_probs=13.4
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
+..+++...+ +|||++.++
T Consensus 37 l~~~~~~c~~-~gI~~lTvy 55 (233)
T PRK14833 37 LREITIWCAN-HKLECLTLY 55 (233)
T ss_pred HHHHHHHHHH-cCCCEEEEe
Confidence 4455556666 899998775
No 58
>PRK12313 glycogen branching enzyme; Provisional
Probab=51.12 E-value=3e+02 Score=32.78 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=21.9
Q ss_pred cCCCChHHHHHHHHHHHHH-HHhcCCcEEEEccCc
Q 005843 281 IGAIDPDKISQFYDDLHKY-LVSQGVDGVKVDVQN 314 (674)
Q Consensus 281 ~~l~~p~~~~~fy~~~~~~-La~~GVD~VKvD~q~ 314 (674)
+.+-+|+ +++|+-+..++ +.+.|||++-+|...
T Consensus 279 ~n~~~~~-vr~~l~~~~~~W~~~~~iDG~R~D~~~ 312 (633)
T PRK12313 279 FDLGKNE-VRSFLISSALFWLDEYHLDGLRVDAVS 312 (633)
T ss_pred cCCCCHH-HHHHHHHHHHHHHHHhCCcEEEEcChh
Confidence 3444564 56665555555 566899999999754
No 59
>PLN02361 alpha-amylase
Probab=50.45 E-value=2.1e+02 Score=32.19 Aligned_cols=81 Identities=16% Similarity=0.241 Sum_probs=47.9
Q ss_pred CCCcccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccccCC
Q 005843 116 LPGMLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNK 195 (674)
Q Consensus 116 ~P~~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~K 195 (674)
.+.++.+|-|.+|+. ---+.|.+.++.|++.|+. -| |-.+...... ..|+... .+. .-+++
T Consensus 11 ~~v~lQ~F~W~~~~~----~~w~~i~~kl~~l~~lG~t--~i-----wl~P~~~~~~-----~~GY~~~-d~y--~~~~~ 71 (401)
T PLN02361 11 REILLQAFNWESHKH----DWWRNLEGKVPDLAKSGFT--SA-----WLPPPSQSLA-----PEGYLPQ-NLY--SLNSA 71 (401)
T ss_pred CcEEEEEEeccCCcc----HHHHHHHHHHHHHHHcCCC--EE-----EeCCCCcCCC-----CCCCCcc-ccc--ccCcc
Confidence 356777788887642 1347899999999999997 22 2111111000 0111111 121 23567
Q ss_pred CCCCCCCCCcCCCChHHHHHHHHHhCCCc
Q 005843 196 FRGTTGDDQKETSGLKDFVLDIKKNFCLK 224 (674)
Q Consensus 196 Fp~~~~~~~~~~~GL~~lv~~I~~~~Glk 224 (674)
|-.. ..|+.+|+.+|+ .|||
T Consensus 72 ~Gt~--------~el~~li~~~h~-~gi~ 91 (401)
T PLN02361 72 YGSE--------HLLKSLLRKMKQ-YNVR 91 (401)
T ss_pred cCCH--------HHHHHHHHHHHH-cCCE
Confidence 7632 479999999999 7999
No 60
>PRK14706 glycogen branching enzyme; Provisional
Probab=50.13 E-value=1.4e+02 Score=35.65 Aligned_cols=71 Identities=18% Similarity=0.110 Sum_probs=41.3
Q ss_pred cCCCChHHHHHHHHHHHHH-HHhcCCcEEEEccCcchhhh--------cCCCCCchh-HHHHHHHHHHHHHHhhCCCCce
Q 005843 281 IGAIDPDKISQFYDDLHKY-LVSQGVDGVKVDVQNILETI--------CSGLGSRVS-LTRHFQQALEESIATNFKDNSI 350 (674)
Q Consensus 281 ~~l~~p~~~~~fy~~~~~~-La~~GVD~VKvD~q~~l~~~--------~~~~~~~~~-~~~ay~~Al~~s~~~~f~g~~i 350 (674)
+++-+| .+++|.-+-.++ +.+.+||++-+|....+-.+ ....+++.. .+..+-+.|...+++.+|+.-+
T Consensus 276 ~~~~~~-eVr~~l~~~~~~W~~e~~iDG~R~Dav~~~ly~d~~~~~~~~~~~gg~~n~~a~~fl~~ln~~v~~~~p~~~~ 354 (639)
T PRK14706 276 FDYGRN-EVVMFLIGSALKWLQDFHVDGLRVDAVASMLYLDFSRTEWVPNIHGGRENLEAIAFLKRLNEVTHHMAPGCMM 354 (639)
T ss_pred cCCCCH-HHHHHHHHHHHHHHHHhCCCeEEEeeehheeecccCcccccccccCCcccHHHHHHHHHHHHHHHHhCCCeEE
Confidence 344455 466666555555 57899999999986553221 111233322 3455677777777777775433
Q ss_pred EE
Q 005843 351 IC 352 (674)
Q Consensus 351 i~ 352 (674)
|.
T Consensus 355 iA 356 (639)
T PRK14706 355 IA 356 (639)
T ss_pred EE
Confidence 33
No 61
>PRK14842 undecaprenyl pyrophosphate synthase; Provisional
Probab=48.83 E-value=1.1e+02 Score=31.89 Aligned_cols=19 Identities=11% Similarity=0.275 Sum_probs=13.7
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
+..+++...+ +|||++.++
T Consensus 41 l~~i~~~c~~-lgI~~vTvY 59 (241)
T PRK14842 41 IDRLMDASLE-YGLKNISLY 59 (241)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 4555666666 899998775
No 62
>cd00598 GH18_chitinase-like The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are inclu
Probab=48.21 E-value=65 Score=31.73 Aligned_cols=65 Identities=23% Similarity=0.343 Sum_probs=42.7
Q ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCCceEEeecCC
Q 005843 285 DPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIATNFKDNSIICCMAQN 357 (674)
Q Consensus 285 ~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~~ 357 (674)
+++..++|.+.+.+++.+.|+|+|-+|+.... ..+. .....|...|++ +++.++....+.+++..
T Consensus 85 ~~~~~~~f~~~~~~~v~~~~~DGidiD~E~~~------~~~~-~~~~~~~~ll~~-lr~~l~~~~~~ls~a~~ 149 (210)
T cd00598 85 DPASRAAFANSLVSFLKTYGFDGVDIDWEYPG------AADN-SDRENFITLLRE-LRSALGAANYLLTIAVP 149 (210)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCceEEeeeCCC------CcCc-cHHHHHHHHHHH-HHHHhcccCcEEEEEec
Confidence 36677899999999999999999999986521 1110 112344444444 66667554567777654
No 63
>PRK14837 undecaprenyl pyrophosphate synthase; Provisional
Probab=46.52 E-value=1.4e+02 Score=31.10 Aligned_cols=19 Identities=26% Similarity=0.462 Sum_probs=13.8
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
++.+++...+ +|||++.++
T Consensus 39 ~~~i~~~c~~-~GI~~lT~Y 57 (230)
T PRK14837 39 AKEIVKHSLK-LGIKYLSLY 57 (230)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 5556666676 899998774
No 64
>PRK14835 undecaprenyl pyrophosphate synthase; Provisional
Probab=45.84 E-value=97 Score=33.01 Aligned_cols=23 Identities=13% Similarity=0.296 Sum_probs=16.2
Q ss_pred HHHHHhhhhhcCCCcCCCCccCc
Q 005843 388 IAAVAFNSIFLGEVVVPDWDMFY 410 (674)
Q Consensus 388 i~~na~nsl~~g~~~~pD~DMf~ 410 (674)
+++++|.-++.-...|||.+.+.
T Consensus 236 LWQsayaElyF~d~lWPdF~~~d 258 (275)
T PRK14835 236 LWQSAYSEYYFCDVYWPGFRKVD 258 (275)
T ss_pred HHhhhheEEEeCCCCCCcCCHHH
Confidence 46667777777777888876554
No 65
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=45.34 E-value=2.5e+02 Score=32.82 Aligned_cols=34 Identities=26% Similarity=0.579 Sum_probs=25.4
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCcEEEEccCcch
Q 005843 282 GAIDPDKISQFYDDLHKYLVSQGVDGVKVDVQNIL 316 (674)
Q Consensus 282 ~l~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l 316 (674)
.+-+|+ ++++..+..+++.+.|||++-+|+-..+
T Consensus 165 n~~np~-v~~~i~~~~~~W~~~giDGfRlDa~~~i 198 (543)
T TIGR02403 165 NWENPE-VREELKDVVNFWRDKGVDGFRLDVINLI 198 (543)
T ss_pred CCCCHH-HHHHHHHHHHHHHHcCCCEEEEeeehhh
Confidence 344564 5666667788888899999999987655
No 66
>TIGR00055 uppS undecaprenyl diphosphate synthase. Alternate name: undecaprenyl pyrophosphate synthetase. Activity has been demonstrated experimentally for members of this family from Micrococcus luteus, E. coli, Haemophilus influenzae, and Streptococcus pneumoniae.
Probab=42.95 E-value=1.7e+02 Score=30.27 Aligned_cols=19 Identities=5% Similarity=0.167 Sum_probs=13.7
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
++.+++...+ +|||++.++
T Consensus 32 ~~~v~~~c~~-~GI~~lT~y 50 (226)
T TIGR00055 32 LRRILRWCAN-LGVECLTLY 50 (226)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 5555666666 899998775
No 67
>PRK14841 undecaprenyl pyrophosphate synthase; Provisional
Probab=42.91 E-value=2e+02 Score=29.85 Aligned_cols=19 Identities=21% Similarity=0.272 Sum_probs=14.1
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
++.+++...+ +|||++.++
T Consensus 36 l~~i~~~~~~-lgIk~lTvY 54 (233)
T PRK14841 36 LHNTVKWSLE-LGIKYLTAF 54 (233)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 5556666666 899998875
No 68
>PRK14840 undecaprenyl pyrophosphate synthase; Provisional
Probab=41.82 E-value=1.8e+02 Score=30.65 Aligned_cols=19 Identities=11% Similarity=0.188 Sum_probs=13.7
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
++.+++...+ +|||++.++
T Consensus 55 l~~v~~~c~~-~GIk~lTvY 73 (250)
T PRK14840 55 LPQIVDTALH-LGIEVLTLF 73 (250)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 4555666666 899998775
No 69
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=39.12 E-value=2.3e+02 Score=34.60 Aligned_cols=66 Identities=8% Similarity=0.026 Sum_probs=39.8
Q ss_pred CCCChHHHHHHHHHHHHHH-HhcCCcEEEEccCcchhhhc------------CCCCCchh-HHHHHHHHHHHHHHhhCCC
Q 005843 282 GAIDPDKISQFYDDLHKYL-VSQGVDGVKVDVQNILETIC------------SGLGSRVS-LTRHFQQALEESIATNFKD 347 (674)
Q Consensus 282 ~l~~p~~~~~fy~~~~~~L-a~~GVD~VKvD~q~~l~~~~------------~~~~~~~~-~~~ay~~Al~~s~~~~f~g 347 (674)
.+-++ .+++|.-+..+++ .+.+||++.+|....+-++. +..++.+. .+-.|-+-+...+.+.+|+
T Consensus 361 N~~~~-eVr~fLl~~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~~~~~g~~~d~~a~~fL~~~N~~i~~~~p~ 439 (758)
T PLN02447 361 NYGNW-EVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNYNEYFGMATDVDAVVYLMLANDLLHGLYPE 439 (758)
T ss_pred cCCCH-HHHHHHHHHHHHHHHHhCcccccccchhhhhccccCcccccccCcccccCCccChHHHHHHHHHHHHHHHhCCC
Confidence 34455 4667766666665 56899999999876553221 11222222 3455666777777777775
Q ss_pred C
Q 005843 348 N 348 (674)
Q Consensus 348 ~ 348 (674)
.
T Consensus 440 ~ 440 (758)
T PLN02447 440 A 440 (758)
T ss_pred e
Confidence 3
No 70
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=37.05 E-value=1e+02 Score=33.05 Aligned_cols=29 Identities=24% Similarity=0.457 Sum_probs=20.4
Q ss_pred ChHHHHHHHHHHH---HHHHhcCCcEEEEccC
Q 005843 285 DPDKISQFYDDLH---KYLVSQGVDGVKVDVQ 313 (674)
Q Consensus 285 ~p~~~~~fy~~~~---~~La~~GVD~VKvD~q 313 (674)
+.+++++.-++|. +...++|+|+|++-..
T Consensus 132 t~~ei~~~i~~~~~aA~~a~~aGfDgveih~~ 163 (327)
T cd02803 132 TKEEIEQIIEDFAAAARRAKEAGFDGVEIHGA 163 (327)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEcch
Confidence 3456666655554 4567799999999864
No 71
>PLN02784 alpha-amylase
Probab=36.45 E-value=4.7e+02 Score=32.48 Aligned_cols=79 Identities=18% Similarity=0.215 Sum_probs=45.6
Q ss_pred cccccccccccccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccccCCCCC
Q 005843 119 MLDWFGWCTWDAFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRG 198 (674)
Q Consensus 119 ~~~~~GWcTW~a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~ 198 (674)
++.+|-|.+|.. ..-...|.+.++.|++.|+. .|-|==-.++.. ..|++.. .+. .-+.+|-.
T Consensus 505 mlQgF~Wds~~d---g~w~~~I~ekldyL~~LG~t--aIWLpP~~~s~s----------~~GY~p~-D~y--~lds~yGT 566 (894)
T PLN02784 505 LCQGFNWESHKS---GRWYMELGEKAAELSSLGFT--VVWLPPPTESVS----------PEGYMPK-DLY--NLNSRYGT 566 (894)
T ss_pred EEEeEEcCcCCC---CchHHHHHHHHHHHHHhCCC--EEEeCCCCCCCC----------CCCcCcc-ccc--ccCcCcCC
Confidence 356677776653 12257889999999999997 221111111110 0122111 121 23567753
Q ss_pred CCCCCCcCCCChHHHHHHHHHhCCCc
Q 005843 199 TTGDDQKETSGLKDFVLDIKKNFCLK 224 (674)
Q Consensus 199 ~~~~~~~~~~GL~~lv~~I~~~~Glk 224 (674)
. ..|+.+|+.+|+ .||+
T Consensus 567 ~--------~ELk~LI~a~H~-~GIk 583 (894)
T PLN02784 567 I--------DELKDLVKSFHE-VGIK 583 (894)
T ss_pred H--------HHHHHHHHHHHH-CCCE
Confidence 2 479999999999 7999
No 72
>PRK10240 undecaprenyl pyrophosphate synthase; Provisional
Probab=36.43 E-value=2.8e+02 Score=28.70 Aligned_cols=19 Identities=5% Similarity=0.016 Sum_probs=14.0
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
++.+++...+ +|||++.+|
T Consensus 26 l~~i~~~c~~-~GI~~lT~y 44 (229)
T PRK10240 26 VRRAVSFAAN-NGIEALTLY 44 (229)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 5556666676 899998775
No 73
>PLN02960 alpha-amylase
Probab=35.17 E-value=2.8e+02 Score=34.37 Aligned_cols=65 Identities=11% Similarity=0.052 Sum_probs=36.8
Q ss_pred CCCChHHHHHHHHHHHHH-HHhcCCcEEEEccCcchhhhcCCC---CC---------chhHHHHHHHHHHHHHHhhCCC
Q 005843 282 GAIDPDKISQFYDDLHKY-LVSQGVDGVKVDVQNILETICSGL---GS---------RVSLTRHFQQALEESIATNFKD 347 (674)
Q Consensus 282 ~l~~p~~~~~fy~~~~~~-La~~GVD~VKvD~q~~l~~~~~~~---~~---------~~~~~~ay~~Al~~s~~~~f~g 347 (674)
++-++ .+++|.-+-.++ |.+.+||++-+|+...+-++..+. .| .-..+-.|-+-+...+.+.+|+
T Consensus 527 Ny~~~-eVr~fLlsna~yWl~EyhIDGfR~DAV~sMlY~d~g~~~~~G~~~~~~n~~~d~~Ai~fL~~lN~~v~~~~P~ 604 (897)
T PLN02960 527 KYGDH-EVLHFLLSNLNWWVTEYRVDGFQFHSLGSMLYTHNGFASFTGDLDEYCNQYVDRDALIYLILANEMLHQLHPN 604 (897)
T ss_pred CCCCH-HHHHHHHHHHHHHHHHHCCCceeecccceeeeeccCccccCCcccccCCccCCchHHHHHHHHHHHHHhhCCC
Confidence 44445 566666555554 578899999999876644332110 00 0112344556666666666664
No 74
>PLN03244 alpha-amylase; Provisional
Probab=34.01 E-value=3.2e+02 Score=33.62 Aligned_cols=65 Identities=9% Similarity=0.049 Sum_probs=37.4
Q ss_pred CCCChHHHHHHHHHHHH-HHHhcCCcEEEEccCcchhhhcCCC-----------CC-chhHHHHHHHHHHHHHHhhCCC
Q 005843 282 GAIDPDKISQFYDDLHK-YLVSQGVDGVKVDVQNILETICSGL-----------GS-RVSLTRHFQQALEESIATNFKD 347 (674)
Q Consensus 282 ~l~~p~~~~~fy~~~~~-~La~~GVD~VKvD~q~~l~~~~~~~-----------~~-~~~~~~ay~~Al~~s~~~~f~g 347 (674)
++-++ .+++|.-+-.+ .+.+.+||++-+|+...+-++..+. .. .-..+-.|-+-+...+.+.+|+
T Consensus 502 nyg~~-EVr~FLLsna~yWleEyhIDGFRfDaVtSMLY~d~G~~~f~g~~~~y~n~~~d~dAv~fL~laN~~ih~~~P~ 579 (872)
T PLN03244 502 KYGDL-DVLHFLISNLNWWITEYQIDGFQFHSLASMIYTHNGFASFNGDLDDYCNQYVDKDALMYLILANEILHALHPK 579 (872)
T ss_pred cCCCH-HHHHHHHHHHHHHHHHhCcCcceeecchhheeeccccccccCCccccccccCCchHHHHHHHHHHHHHHhCCC
Confidence 33345 56677655555 4678999999999875543321110 00 0112445666666667777774
No 75
>cd02879 GH18_plant_chitinase_class_V The class V plant chitinases have a glycosyl hydrolase family 18 (GH18) domain, but lack the chitin-binding domain present in other GH18 enzymes. The GH18 domain of the class V chitinases has endochitinase activity in some cases and no catalytic activity in others. Included in this family is a lectin found in black locust (Robinia pseudoacacia) bark, which binds chitin but lacks chitinase activity. Also included is a chitinase-related receptor-like kinase (CHRK1) from tobacco (Nicotiana tabacum), with an N-terminal GH18 domain and a C-terminal kinase domain, which is thought to be part of a plant signaling pathway. The GH18 domain of CHRK1 is expressed extracellularly where it binds chitin but lacks chitinase activity.
Probab=33.86 E-value=1.2e+02 Score=32.37 Aligned_cols=69 Identities=16% Similarity=0.203 Sum_probs=41.4
Q ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCCceEEeecC
Q 005843 285 DPDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIATNFKDNSIICCMAQ 356 (674)
Q Consensus 285 ~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~ 356 (674)
+++..+.|.+++.+++...|+|+|-+|+..... ......-..+.++.+++|....++. +....+.+++.
T Consensus 89 ~~~~R~~fi~siv~~l~~~~fDGidiDWE~P~~--~~d~~n~~~ll~elr~~l~~~~~~~-~~~~~~ls~av 157 (299)
T cd02879 89 DPTARKAFINSSIKVARKYGFDGLDLDWEFPSS--QVEMENFGKLLEEWRAAVKDEARSS-GRPPLLLTAAV 157 (299)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceeecccCCCC--hhHHHHHHHHHHHHHHHHHHHhhcc-CCCcEEEEeec
Confidence 466778999999999999999999999865210 0000112234555566665422111 11346666664
No 76
>cd00475 CIS_IPPS Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS); homodimers which catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase) catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidooglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS are mechanistically and structurally distinct from trans-IPPS, lacking the DDXXD motifs, yet requiring Mg2+ for activity.
Probab=33.64 E-value=3.2e+02 Score=28.13 Aligned_cols=19 Identities=21% Similarity=0.256 Sum_probs=14.3
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
++.+++...+ +|||++.++
T Consensus 33 ~~~i~~~~~~-~gI~~lTvy 51 (221)
T cd00475 33 LRDILRWCLE-LGVKEVTLY 51 (221)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 5566667777 899998775
No 77
>cd06548 GH18_chitinase The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
Probab=32.72 E-value=1.7e+02 Score=31.48 Aligned_cols=30 Identities=20% Similarity=0.426 Sum_probs=26.6
Q ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 285 DPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 285 ~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
+++..+.|.+++.+++.+.|+|+|=+|+..
T Consensus 106 ~~~~r~~Fi~siv~~l~~~~fDGidiDwE~ 135 (322)
T cd06548 106 TEASRAKFADSAVDFIRKYGFDGIDIDWEY 135 (322)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEECCcC
Confidence 466677899999999999999999999865
No 78
>cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. Chitobiase can only do so if the asparagine that joins the oligosaccharide to protein is previously removed by a glycosylasparaginase. Chitobiase is therefore the final step in the lysosomal degradation of the protein/carbohydrate linkage component of asparagine-linked glycoproteins. The catalytic domain of chitobiase is an eight-stranded alpha/beta barrel fold similar to that of other family 18 glycosyl hydrolases such as hevamine and chitotriosidase.
Probab=31.38 E-value=96 Score=34.12 Aligned_cols=31 Identities=23% Similarity=0.384 Sum_probs=27.2
Q ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEccCcc
Q 005843 285 DPDKISQFYDDLHKYLVSQGVDGVKVDVQNI 315 (674)
Q Consensus 285 ~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~ 315 (674)
+|+.-++|.+++.+++.+.|+|+|-+|+...
T Consensus 93 ~~~~R~~fi~siv~~~~~~gfDGIdIDwE~p 123 (358)
T cd02875 93 NPTYRTQWIQQKVELAKSQFMDGINIDIEQP 123 (358)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCeEEEcccCC
Confidence 4666778999999999999999999999753
No 79
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provi
Probab=31.07 E-value=5e+02 Score=28.34 Aligned_cols=23 Identities=17% Similarity=0.091 Sum_probs=18.4
Q ss_pred CChHHHHHHHHHhCCCc-EEEEEee
Q 005843 208 SGLKDFVLDIKKNFCLK-YVYVWHA 231 (674)
Q Consensus 208 ~GL~~lv~~I~~~~Glk-~vgvWha 231 (674)
.+|+.+++.||+ +|-+ .+=+||+
T Consensus 77 ~~~~~l~~~vh~-~g~~~~~QL~h~ 100 (353)
T cd02930 77 AGHRLITDAVHA-EGGKIALQILHA 100 (353)
T ss_pred HHHHHHHHHHHH-cCCEEEeeccCC
Confidence 399999999999 7855 4567875
No 80
>PRK14832 undecaprenyl pyrophosphate synthase; Provisional
Probab=30.86 E-value=3.3e+02 Score=28.70 Aligned_cols=19 Identities=21% Similarity=0.359 Sum_probs=14.1
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
+..+++...+ +||+++.++
T Consensus 51 l~~i~~~c~~-~gI~~lTvy 69 (253)
T PRK14832 51 LKELLRCCKD-WGIKALTAY 69 (253)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 5566666676 899998775
No 81
>KOG2500 consensus Uncharacterized conserved protein [Function unknown]
Probab=30.65 E-value=38 Score=34.75 Aligned_cols=33 Identities=33% Similarity=0.373 Sum_probs=29.1
Q ss_pred CCeEEeccCCCeEEEEeecCc-eEEEEEeeeeee
Q 005843 551 TGSLFRLAKAESFGIALKVMQ-CDVFTVSPIKVY 583 (674)
Q Consensus 551 ~g~~~~~~~~~~~~v~L~~~~-~ei~t~~pv~~~ 583 (674)
+|++.++..+....+.|+.++ .|+|..|||..+
T Consensus 43 tGrlrvvakg~~~~ikLeD~tsg~LfA~c~id~~ 76 (253)
T KOG2500|consen 43 TGRLRVVAKGERCEIKLEDKTSGELFAQCPIDEG 76 (253)
T ss_pred cceeEEEEcCcEEEEEeccCCchhhhhhCcccCC
Confidence 789999988999999999764 899999999875
No 82
>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]
Probab=30.42 E-value=93 Score=29.53 Aligned_cols=44 Identities=23% Similarity=0.329 Sum_probs=30.4
Q ss_pred eeEeecCCCceEEecCeeeeeEEeCCCceEEEEcCC----CCceeeeeEe
Q 005843 628 FGAYSSTKPSSILLNSKNEEFKFSAEDNLLTVTIPP----TTSSWDITLC 673 (674)
Q Consensus 628 ~g~Yss~~P~~~~vdg~~~~f~yd~~~gll~v~lp~----~~~~~~v~i~ 673 (674)
.|-|.-.-+--..|+-..+..+|.+ |+|+|+||- +.....|+|+
T Consensus 99 ~~~f~r~~~Lp~~v~~~~~~A~~~n--GvL~I~lpk~~~~~~~~~~i~I~ 146 (146)
T COG0071 99 YGEFERTFRLPEKVDPEVIKAKYKN--GLLTVTLPKAEPEEKKPKRIEIE 146 (146)
T ss_pred eeeEEEEEECcccccccceeeEeeC--cEEEEEEeccccccccCceeecC
Confidence 4555544444556676678899997 999999964 3356777763
No 83
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=29.31 E-value=1.8e+02 Score=29.88 Aligned_cols=70 Identities=11% Similarity=0.133 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCCceEEeecCCCC
Q 005843 286 PDKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIATNFKDNSIICCMAQNTD 359 (674)
Q Consensus 286 p~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~~~~ 359 (674)
++..++|.+.+..++...|+|+|=+|....... ..+........|...+++ +++.++..+.+.+++..+.
T Consensus 86 ~~~~~~fa~~l~~~v~~yglDGiDiD~E~~~~~---~~~~~~~~~~~~~~lv~~-Lr~~~~~~~kllt~~~~~~ 155 (255)
T cd06542 86 DAAAKAYAKAIVDTVDKYGLDGVDFDDEYSGYG---KNGTSQPSNEAFVRLIKE-LRKYMGPTDKLLTIDGYGQ 155 (255)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeeeecccC---CCCCCcchHHHHHHHHHH-HHHHhCcCCcEEEEEecCC
Confidence 567889999999999999999999998653210 000011123445555554 6667753345667765443
No 84
>cd02872 GH18_chitolectin_chitotriosidase This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active chitotriosidases. The conserved domain is an eight-stranded alpha/beta barrel fold belonging to the family 18 glycosyl hydrolases. The fold has a pronounced active-site cleft at the C-terminal end of the beta-barrel. The chitolectins lack a key active site glutamate (the proton donor required for hydrolytic activity) but retain highly conserved residues involved in oligosaccharide binding. Chitotriosidase is a chitinolytic enzyme expressed in maturing macrophages, which suggests that it plays a part in antimicrobial defense. Chitotriosidase hydrolyzes chitotriose, as well as colloidal chitin to yield chitobiose and is therefore considered an exochitinase. Chitotriosidase occurs in two major forms, the la
Probab=29.19 E-value=1.4e+02 Score=32.45 Aligned_cols=30 Identities=23% Similarity=0.476 Sum_probs=26.2
Q ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 285 DPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 285 ~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
++.....|.+++.+++...|+|+|-+|+..
T Consensus 93 ~~~~r~~fi~~iv~~l~~~~~DGidiDwE~ 122 (362)
T cd02872 93 SPENRKTFIKSAIAFLRKYGFDGLDLDWEY 122 (362)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCCeeeeeec
Confidence 456677899999999999999999999865
No 85
>cd02874 GH18_CFLE_spore_hydrolase Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
Probab=27.91 E-value=1.7e+02 Score=31.09 Aligned_cols=30 Identities=23% Similarity=0.528 Sum_probs=26.4
Q ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 285 DPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 285 ~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
+++..+.|.+++.+++...|+|+|-+|+..
T Consensus 84 ~~~~r~~fi~~iv~~l~~~~~DGidiDwE~ 113 (313)
T cd02874 84 NPEARQRLINNILALAKKYGYDGVNIDFEN 113 (313)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCcEEEeccc
Confidence 466667899999999999999999999865
No 86
>PF15016 DUF4520: Domain of unknown function (DUF4520)
Probab=27.79 E-value=1.6e+02 Score=25.74 Aligned_cols=46 Identities=20% Similarity=0.162 Sum_probs=36.8
Q ss_pred EEEEEeecceeeEeecCCCceEEecCeeeeeEEeC----CCceEEEEcCC
Q 005843 618 IHIKGRGGGSFGAYSSTKPSSILLNSKNEEFKFSA----EDNLLTVTIPP 663 (674)
Q Consensus 618 v~v~lkg~G~~g~Yss~~P~~~~vdg~~~~f~yd~----~~gll~v~lp~ 663 (674)
-+..+-|.|+|-+|+..+-+.+-.|+.-....|+- +++.+++.+|.
T Consensus 8 ~e~~i~~~GrF~AysDgrVr~~F~Drt~L~l~~~~~~~~~~~~c~l~~pD 57 (85)
T PF15016_consen 8 EESSIPGVGRFTAYSDGRVRVHFDDRTILTLIWNFSSREELGWCKLTFPD 57 (85)
T ss_pred EEEecCCceEEEEEcCCeEEEEEcCCCEEEEEeCCCCcccCCEEEEEccC
Confidence 34556789999999999999999999998888821 35778887776
No 87
>PRK14828 undecaprenyl pyrophosphate synthase; Provisional
Probab=27.37 E-value=6.4e+02 Score=26.57 Aligned_cols=19 Identities=11% Similarity=0.137 Sum_probs=13.8
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
+..+++...+ +|||++.++
T Consensus 60 l~~~~~~~~~-~gIk~lTvY 78 (256)
T PRK14828 60 IGEFLGWCDE-TDVNVVTLY 78 (256)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 5555666666 899998775
No 88
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
Probab=26.10 E-value=2.6e+02 Score=30.01 Aligned_cols=64 Identities=16% Similarity=0.174 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHHhhCCCCceEEeecCCC
Q 005843 287 DKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIATNFKDNSIICCMAQNT 358 (674)
Q Consensus 287 ~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~g~~ii~cMs~~~ 358 (674)
..+.+|.+.+.+.+..+|+|+|-+|..... ...+ +....+.+||.. +++.+|+..+...+.-.+
T Consensus 87 ~~~~~~~~a~~~~i~~y~~dgiDfDiE~~~------~~d~-~~~~~~~~al~~-Lq~~~p~l~vs~Tlp~~p 150 (294)
T cd06543 87 TSADQLAAAYQKVIDAYGLTHLDFDIEGGA------LTDT-AAIDRRAQALAL-LQKEYPDLKISFTLPVLP 150 (294)
T ss_pred ccHHHHHHHHHHHHHHhCCCeEEEeccCCc------cccc-hhHHHHHHHHHH-HHHHCCCcEEEEecCCCC
Confidence 456789999999999999999999985521 1111 223456667765 677787554444443333
No 89
>PRK13840 sucrose phosphorylase; Provisional
Probab=25.61 E-value=2.3e+02 Score=32.73 Aligned_cols=30 Identities=7% Similarity=0.108 Sum_probs=23.6
Q ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEccCcc
Q 005843 285 DPDKISQFYDDLHKYLVSQGVDGVKVDVQNI 315 (674)
Q Consensus 285 ~p~~~~~fy~~~~~~La~~GVD~VKvD~q~~ 315 (674)
+|+ +++++.+..+++.+.|||++-+|+...
T Consensus 168 NP~-V~~~i~~il~fwl~~GVDgfRLDAv~~ 197 (495)
T PRK13840 168 SAA-GWEYLMSILDRFAASHVTLIRLDAAGY 197 (495)
T ss_pred CHH-HHHHHHHHHHHHHHCCCCEEEEechhh
Confidence 364 566666777888899999999998643
No 90
>COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion]
Probab=25.04 E-value=6e+02 Score=28.19 Aligned_cols=23 Identities=30% Similarity=0.680 Sum_probs=18.6
Q ss_pred CChHHHHHHHHHhCCCc-EEEEEee
Q 005843 208 SGLKDFVLDIKKNFCLK-YVYVWHA 231 (674)
Q Consensus 208 ~GL~~lv~~I~~~~Glk-~vgvWha 231 (674)
.|++.+++.||+ +|-| .+=+||+
T Consensus 83 ~~~~~vt~avH~-~G~~i~iQL~H~ 106 (363)
T COG1902 83 PGLKRLTEAVHA-HGAKIFIQLWHA 106 (363)
T ss_pred HHHHHHHHHHHh-cCCeEEEEeccC
Confidence 499999999999 7844 4567887
No 91
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.74 E-value=1e+03 Score=26.94 Aligned_cols=142 Identities=18% Similarity=0.110 Sum_probs=75.4
Q ss_pred ccCHHHHHHHHHHHHhCCCCccEEE-EecCcccCCCCCcCCCCCCccccccCCcccCccccC-CCCCCCCCCCcCCCChH
Q 005843 134 EVNPQGIKDGLKSLSEGGTPAKFLI-IDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENN-KFRGTTGDDQKETSGLK 211 (674)
Q Consensus 134 ~vte~~i~~~~~~l~~~Gi~~~~vi-IDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~-KFp~~~~~~~~~~~GL~ 211 (674)
-.+++++.+.++.|...|+..-|++ +=+|.--... ...-+..+. .+.. .+.+-+=|+
T Consensus 60 ~~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lypS-----------------~~~p~s~~~~~~~~----~~~g~DpLa 118 (418)
T COG1649 60 LFQRQELKDILDDLQKLNFNTVYPQVWNDGDALYPS-----------------AVLPWSDGLPGVLG----VDPGYDPLA 118 (418)
T ss_pred cccHHHHHHHHHHHHHcCCceeEEEEecCccccccc-----------------cccccccCcCcccC----CCCCCChHH
Confidence 5688999999999999999865544 3333321111 010111111 1100 011113488
Q ss_pred HHHHHHHHhCCCcEEEEEeeccCccCCccc-CCcCcccccCcccccCCCCCCcccCCccccccccccccC---cCCCCh-
Q 005843 212 DFVLDIKKNFCLKYVYVWHALMGYWGGLVL-NSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYG---IGAIDP- 286 (674)
Q Consensus 212 ~lv~~I~~~~Glk~vgvWha~~GyWgGI~p-~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g---~~l~~p- 286 (674)
.++++.|+ .||+ |--|+.+.. +.| .++..+.+.. +.....|+|..-. ..| ..+.||
T Consensus 119 ~~I~~AHk-r~l~-v~aWf~~~~----~a~~~s~~~~~~p~---------~~~~~~~~~~~~~----~~~~~~~~~ldPg 179 (418)
T COG1649 119 FVIAEAHK-RGLE-VHAWFNPYR----MAPPTSPLTKRHPH---------WLTTKRPGWVYVR----HQGWGKRVWLDPG 179 (418)
T ss_pred HHHHHHHh-cCCe-eeechhhcc----cCCCCChhHhhCCC---------CcccCCCCeEEEe----cCCceeeeEeCCC
Confidence 88888898 5999 778877632 323 3322221111 1222224442211 111 122333
Q ss_pred -HHHHHHHHHH-HHHHHhcCCcEEEEccCcc
Q 005843 287 -DKISQFYDDL-HKYLVSQGVDGVKVDVQNI 315 (674)
Q Consensus 287 -~~~~~fy~~~-~~~La~~GVD~VKvD~q~~ 315 (674)
+++++|+-++ ........||+|-.|.-+.
T Consensus 180 ~Pevq~~i~~lv~evV~~YdvDGIQfDd~fy 210 (418)
T COG1649 180 IPEVQDFITSLVVEVVRNYDVDGIQFDDYFY 210 (418)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCceecceeec
Confidence 3577777655 4556778999999998665
No 92
>cd02876 GH18_SI-CLP Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl hydrolase family 18 (GH18) domain but lacks a chitin-binding domain. The catalytic amino acids of the GH18 domain are not conserved in SI-CLP, similar to the chitolectins YKL-39, YKL-40, and YM1/2. Human SI-CLP is sorted to late endosomes and secretory lysosomes in alternatively activated macrophages.
Probab=23.50 E-value=1.9e+02 Score=30.92 Aligned_cols=27 Identities=15% Similarity=0.217 Sum_probs=24.3
Q ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEc
Q 005843 285 DPDKISQFYDDLHKYLVSQGVDGVKVD 311 (674)
Q Consensus 285 ~p~~~~~fy~~~~~~La~~GVD~VKvD 311 (674)
+++.-+.|.+++.+++.+.|+|+|-+|
T Consensus 89 ~~~~R~~fi~s~~~~~~~~~~DGidiD 115 (318)
T cd02876 89 DEQEREKLIKLLVTTAKKNHFDGIVLE 115 (318)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCcEEEe
Confidence 466677899999999999999999999
No 93
>cd02873 GH18_IDGF The IDGF's (imaginal disc growth factors) are a family of growth factors identified in insects that include at least five members, some of which are encoded by genes in a tight cluster. The IDGF's have an eight-stranded alpha/beta barrel fold and are related to the glycosyl hydrolase family 18 (GH18) chitinases, but they have an amino acid substitution known to abolish chitinase catalytic activity. IDGFs may have evolved from chitinases to gain new functions as growth factors, interacting with cell surface glycoproteins involved in growth-promoting processes.
Probab=23.17 E-value=2.3e+02 Score=31.76 Aligned_cols=30 Identities=23% Similarity=0.410 Sum_probs=26.5
Q ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 285 DPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 285 ~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
+++.-++|.+++.++|...|+|+|-+|+..
T Consensus 102 ~~~~R~~Fi~siv~~l~~~~fDGidiDWEy 131 (413)
T cd02873 102 SSESRNAFINSAHSLLKTYGFDGLDLAWQF 131 (413)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCCeEeeeeC
Confidence 466677899999999999999999999865
No 94
>PRK13523 NADPH dehydrogenase NamA; Provisional
Probab=22.58 E-value=8.3e+02 Score=26.64 Aligned_cols=29 Identities=10% Similarity=0.122 Sum_probs=21.1
Q ss_pred ChHHHHHHHHHHH---HHHHhcCCcEEEEccC
Q 005843 285 DPDKISQFYDDLH---KYLVSQGVDGVKVDVQ 313 (674)
Q Consensus 285 ~p~~~~~fy~~~~---~~La~~GVD~VKvD~q 313 (674)
+.++++++-++|. +...++|+|+|.+-+-
T Consensus 133 t~eeI~~ii~~f~~aA~~a~~aGfDgVeih~a 164 (337)
T PRK13523 133 TKEQIKETVLAFKQAAVRAKEAGFDVIEIHGA 164 (337)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence 3567777766655 4567889999999764
No 95
>COG3469 Chitinase [Carbohydrate transport and metabolism]
Probab=22.43 E-value=1.6e+02 Score=31.04 Aligned_cols=61 Identities=15% Similarity=0.327 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHHhhCC--CCceEEeecCC
Q 005843 289 ISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIATNFK--DNSIICCMAQN 357 (674)
Q Consensus 289 ~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~f~--g~~ii~cMs~~ 357 (674)
-+.|-+++.+....||+|++-+|--..-.... +......+--+++. .|.. |..++-.|++-
T Consensus 119 E~~fv~eiirlietyGFDGLDiDLEq~ai~~~----dnq~v~p~alk~vk----~hyk~~Gk~f~itMAPE 181 (332)
T COG3469 119 EQAFVNEIIRLIETYGFDGLDIDLEQSAILAA----DNQTVIPAALKAVK----DHYKNQGKNFFITMAPE 181 (332)
T ss_pred HHHHHHHHHHHHHHhCCCccccchhhhhhhhc----CCeeehHHHHHHHH----HHHHhcCCceEEEecCC
Confidence 46899999999999999999999633211111 11112222333333 3432 44688889874
No 96
>PRK14830 undecaprenyl pyrophosphate synthase; Provisional
Probab=22.09 E-value=8.7e+02 Score=25.49 Aligned_cols=19 Identities=11% Similarity=0.253 Sum_probs=13.8
Q ss_pred hHHHHHHHHHhCCCcEEEEE
Q 005843 210 LKDFVLDIKKNFCLKYVYVW 229 (674)
Q Consensus 210 L~~lv~~I~~~~Glk~vgvW 229 (674)
+..+++...+ +||+++.++
T Consensus 55 l~~~l~~c~~-~GI~~vTvY 73 (251)
T PRK14830 55 VKKITKAASE-LGVKVLTLY 73 (251)
T ss_pred HHHHHHHHHH-cCCCEEEEE
Confidence 4555666666 899998876
No 97
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas.
Probab=21.40 E-value=2.2e+02 Score=29.44 Aligned_cols=30 Identities=37% Similarity=0.698 Sum_probs=26.4
Q ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 285 DPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 285 ~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
+++..+.|.+++.+++.+.|+|+|-+|+..
T Consensus 80 ~~~~r~~fi~~lv~~~~~~~~DGIdiDwE~ 109 (253)
T cd06545 80 DPAKRKALVDKIINYVVSYNLDGIDVDLEG 109 (253)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCceeEEeec
Confidence 466677899999999999999999999865
No 98
>cd02878 GH18_zymocin_alpha Zymocin, alpha subunit. Zymocin is a heterotrimeric enzyme that inhibits yeast cell cycle progression. The zymocin alpha subunit has a chitinase activity that is essential for holoenzyme action from the cell exterior while the gamma subunit contains the intracellular toxin responsible for G1 phase cell cycle arrest. The zymocin alpha and beta subunits are thought to act from the cell's exterior by docking to the cell wall-associated chitin, thus mediating gamma-toxin translocation. The alpha subunit has an eight-stranded TIM barrel fold similar to that of family 18 glycosyl hydrolases such as hevamine, chitolectin, and chitobiase.
Probab=21.01 E-value=3.4e+02 Score=29.61 Aligned_cols=30 Identities=20% Similarity=0.440 Sum_probs=27.2
Q ss_pred ChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 285 DPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 285 ~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
+++...+|-+++.+++...|+|+|-+|+..
T Consensus 88 ~~~~R~~Fi~si~~~~~~~~fDGidiDwE~ 117 (345)
T cd02878 88 KPANRDTFANNVVNFVNKYNLDGVDFDWEY 117 (345)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCceeecccC
Confidence 567778899999999999999999999975
No 99
>PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX
Probab=20.99 E-value=1.1e+03 Score=25.66 Aligned_cols=146 Identities=14% Similarity=0.195 Sum_probs=83.7
Q ss_pred ccccccCHHHHHHHHHHHHhCCCCccEEEEecCcccCCCCCcCCCCCCccccccCCcccCccccCCCCCCCCCCCcCCCC
Q 005843 130 AFYQEVNPQGIKDGLKSLSEGGTPAKFLIIDDGWQDTTNEFQIEGEPFAEGTQFGGRLASIKENNKFRGTTGDDQKETSG 209 (674)
Q Consensus 130 a~~~~vte~~i~~~~~~l~~~Gi~~~~viIDDGWq~~~~d~~~~~~~~~~g~~~~~~L~~~~~n~KFp~~~~~~~~~~~G 209 (674)
.||-.-+.+.+.++++.+++.||. .|+++=-|+... +|. +
T Consensus 50 GyYdl~~p~v~~~Q~~lA~~~GI~--gF~~~~Ywf~gk------------------~lL--e------------------ 89 (345)
T PF14307_consen 50 GYYDLRDPEVMEKQAELAKEYGID--GFCFYHYWFNGK------------------RLL--E------------------ 89 (345)
T ss_pred CcccCCCHHHHHHHHHHHHHhCCC--EEEEEeeecCCc------------------hHH--H------------------
Confidence 456556888899999999999999 999999999321 131 1
Q ss_pred hHHHHHHHHH-hCCCcEEEEE--eeccCccCCcccCCcCcccccCcccccCCCCCCcccCCccccccccccccCcCCCCh
Q 005843 210 LKDFVLDIKK-NFCLKYVYVW--HALMGYWGGLVLNSSGTKMYNPEMKYPVQSPGNLANMRDLSIDCMEMEKYGIGAIDP 286 (674)
Q Consensus 210 L~~lv~~I~~-~~Glk~vgvW--ha~~GyWgGI~p~~~~~~~y~~~~~~p~~~~g~~~~~pd~~~~~~~~~~~g~~l~~p 286 (674)
+++-..+.. +..|++.-+| |.....|.|.....-..+ .+...
T Consensus 90 -~p~~~~l~~~~~d~pFcl~WAN~~w~~~w~g~~~~~l~~q----------------------------------~y~~~ 134 (345)
T PF14307_consen 90 -KPLENLLASKEPDFPFCLCWANENWTRRWDGRNNEILIEQ----------------------------------KYSGE 134 (345)
T ss_pred -HHHHHHHhcCCCCCcEEEEECCChhhhccCCCCccccccc----------------------------------cCCch
Confidence 222122222 2458877788 666666766522110000 11224
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEccCcchhhhcCCCCCchhHHHHHHHHHHHHHHhh-CCCCceEEeec
Q 005843 287 DKISQFYDDLHKYLVSQGVDGVKVDVQNILETICSGLGSRVSLTRHFQQALEESIATN-FKDNSIICCMA 355 (674)
Q Consensus 287 ~~~~~fy~~~~~~La~~GVD~VKvD~q~~l~~~~~~~~~~~~~~~ay~~Al~~s~~~~-f~g~~ii~cMs 355 (674)
++..+|++.+..++++- .|+|||.--.+-....+ .....+.+.+.|++.++++ +++-.+|.+..
T Consensus 135 ~d~~~~~~~l~~~F~D~--rYikVdGKPv~~Iy~p~---~~pd~~~~~~~wr~~a~~~G~~giyii~~~~ 199 (345)
T PF14307_consen 135 DDWKEHFRYLLPYFKDP--RYIKVDGKPVFLIYRPG---DIPDIKEMIERWREEAKEAGLPGIYIIAVQG 199 (345)
T ss_pred hHHHHHHHHHHHHhCCC--CceeECCEEEEEEECcc---cccCHHHHHHHHHHHHHHcCCCceEEEEEec
Confidence 56678888888888765 58999986654322221 1122344445554433333 33333555544
No 100
>cd06544 GH18_narbonin Narbonin is a plant 2S protein from the globulin fraction of narbon bean (Vicia narbonensis L.) cotyledons with unknown function. Narbonin has a glycosyl hydrolase family 18 (GH18) domain without the conserved catalytic residues and with no known enzymatic activity. Narbonin amounts to up to 3% of the total seed globulins of mature seeds and was thought to be a storage protein but was found to degrade too slowly during germination. This family also includes the VfNOD32 nodulin from Vicia faba.
Probab=20.97 E-value=1.9e+02 Score=30.24 Aligned_cols=27 Identities=19% Similarity=0.384 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 288 KISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 288 ~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
-++.|.+++.+++..+|+|+|-+|+..
T Consensus 97 ~~~~fv~S~~~~l~~~~fDGiDiDwE~ 123 (253)
T cd06544 97 WVSNAVSSLTSIIQTYNLDGIDIDYEH 123 (253)
T ss_pred HHHHHHHHHHHHHHHhCCCceeeeccc
Confidence 456788999999999999999999975
No 101
>cd06549 GH18_trifunctional GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
Probab=20.42 E-value=2.7e+02 Score=29.59 Aligned_cols=31 Identities=26% Similarity=0.570 Sum_probs=26.9
Q ss_pred CChHHHHHHHHHHHHHHHhcCCcEEEEccCc
Q 005843 284 IDPDKISQFYDDLHKYLVSQGVDGVKVDVQN 314 (674)
Q Consensus 284 ~~p~~~~~fy~~~~~~La~~GVD~VKvD~q~ 314 (674)
.+|+.-++|.+++.+++...|+|+|-+|+-.
T Consensus 84 ~~~~~R~~fi~~iv~~~~~~~~dGidiD~E~ 114 (298)
T cd06549 84 ADPSARAKFIANIAAYLERNQADGIVLDFEE 114 (298)
T ss_pred cCHHHHHHHHHHHHHHHHHhCCCCEEEecCC
Confidence 3566677899999999999999999999854
No 102
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=20.38 E-value=2.8e+02 Score=30.21 Aligned_cols=64 Identities=22% Similarity=0.406 Sum_probs=44.4
Q ss_pred CCChHHHHHHHHHHHHHHhcCCCccccccCCCcccccccccccc-cccccCHHHHHHHHHHHHhCCCC
Q 005843 87 GDNPFDLVKESMKILETHLGTFSIRETKQLPGMLDWFGWCTWDA-FYQEVNPQGIKDGLKSLSEGGTP 153 (674)
Q Consensus 87 g~~p~~~i~~a~~~~~~~~~~~~~~~~k~~P~~~~~~GWcTW~a-~~~~vte~~i~~~~~~l~~~Gi~ 153 (674)
...||+.+.++.+..++.+..... ..+.+| |+..|.. +|-. .+...+++.|+++++++.+.|+.
T Consensus 241 ~~~PY~~v~~~~~~~~~~~~~~~~-~~~~RP-WlQ~Ft~-~~~~~~~~~Yg~~ev~aQI~A~~d~g~~ 305 (316)
T PF13200_consen 241 DLEPYEIVYRSLKRAKERLRGLEG-PAIIRP-WLQDFTA-SWLGKNYKEYGPEEVRAQIQALKDAGIE 305 (316)
T ss_pred ccChHHHHHHHHHHHHHHhhcCCC-CCeEec-ccccccc-cccccCccccCHHHHHHHHHHHHHcCCC
Confidence 468999999999988887754321 234455 4433322 3322 25678999999999999999986
No 103
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=20.02 E-value=6.5e+02 Score=25.51 Aligned_cols=23 Identities=13% Similarity=0.151 Sum_probs=17.4
Q ss_pred ChHHHHHHHHHhCCCcEEEEEeec
Q 005843 209 GLKDFVLDIKKNFCLKYVYVWHAL 232 (674)
Q Consensus 209 GL~~lv~~I~~~~Glk~vgvWha~ 232 (674)
-|..+++..++ +||+-+--+|..
T Consensus 63 ~ld~~v~~a~~-~gi~vild~h~~ 85 (281)
T PF00150_consen 63 RLDRIVDAAQA-YGIYVILDLHNA 85 (281)
T ss_dssp HHHHHHHHHHH-TT-EEEEEEEES
T ss_pred HHHHHHHHHHh-CCCeEEEEeccC
Confidence 68888999988 799976666665
Done!