Query 005848
Match_columns 674
No_of_seqs 383 out of 2775
Neff 9.6
Searched_HMMs 46136
Date Thu Mar 28 14:38:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005848.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005848hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2019 Metalloendoprotease HM 100.0 2E-107 5E-112 831.4 53.9 665 1-674 66-879 (998)
2 COG1026 Predicted Zn-dependent 100.0 3E-101 8E-106 832.7 52.6 663 1-674 34-849 (978)
3 PTZ00432 falcilysin; Provision 100.0 5.3E-92 1.2E-96 820.0 65.4 669 1-674 104-993 (1119)
4 KOG0961 Predicted Zn2+-depende 100.0 1.5E-52 3.3E-57 428.5 38.3 641 14-673 46-870 (1022)
5 PRK15101 protease3; Provisiona 100.0 6.3E-50 1.4E-54 474.1 47.7 603 10-672 70-810 (961)
6 PF08367 M16C_assoc: Peptidase 100.0 4.9E-36 1.1E-40 296.0 23.8 247 288-537 1-248 (248)
7 KOG0959 N-arginine dibasic con 100.0 1.3E-30 2.8E-35 288.6 45.3 602 9-668 53-804 (974)
8 COG0612 PqqL Predicted Zn-depe 100.0 5.2E-33 1.1E-37 300.9 24.3 308 9-340 42-377 (438)
9 TIGR02110 PQQ_syn_pqqF coenzym 100.0 6.2E-33 1.3E-37 305.2 23.6 292 10-324 26-345 (696)
10 TIGR02110 PQQ_syn_pqqF coenzym 100.0 1.9E-32 4.1E-37 301.3 26.2 279 364-668 4-290 (696)
11 COG1025 Ptr Secreted/periplasm 100.0 7.1E-30 1.5E-34 277.4 44.8 602 9-668 49-786 (937)
12 COG0612 PqqL Predicted Zn-depe 100.0 3E-32 6.5E-37 294.9 21.7 282 364-673 21-318 (438)
13 KOG0960 Mitochondrial processi 100.0 1.9E-31 4.2E-36 259.2 22.0 292 9-328 58-385 (467)
14 KOG0960 Mitochondrial processi 100.0 1.8E-27 3.9E-32 231.7 20.3 283 364-674 38-340 (467)
15 PRK15101 protease3; Provisiona 99.9 6E-27 1.3E-31 278.1 22.4 282 364-668 48-341 (961)
16 KOG2067 Mitochondrial processi 99.9 5.3E-25 1.1E-29 214.8 14.5 318 11-358 51-430 (472)
17 PTZ00432 falcilysin; Provision 99.9 1.1E-22 2.5E-27 238.7 20.6 272 365-668 97-438 (1119)
18 KOG2067 Mitochondrial processi 99.8 2.4E-20 5.3E-25 182.5 15.7 284 364-674 29-337 (472)
19 COG1025 Ptr Secreted/periplasm 99.8 3.6E-18 7.7E-23 186.8 21.9 282 364-668 28-321 (937)
20 PF00675 Peptidase_M16: Insuli 99.8 1.2E-19 2.7E-24 165.9 6.6 133 9-161 16-148 (149)
21 KOG0959 N-arginine dibasic con 99.8 4.6E-17 9.9E-22 181.6 22.6 283 364-667 32-325 (974)
22 PF00675 Peptidase_M16: Insuli 99.6 8.8E-15 1.9E-19 133.7 14.1 147 370-528 1-148 (149)
23 KOG2583 Ubiquinol cytochrome c 99.5 1.1E-13 2.4E-18 136.7 14.5 173 9-204 47-219 (429)
24 KOG2583 Ubiquinol cytochrome c 99.3 2.3E-10 4.9E-15 113.5 21.8 249 364-646 27-279 (429)
25 PF05193 Peptidase_M16_C: Pept 99.3 3.2E-12 7E-17 121.0 7.8 119 549-668 4-134 (184)
26 COG1026 Predicted Zn-dependent 99.1 9.7E-10 2.1E-14 122.0 16.6 262 366-660 28-323 (978)
27 PF05193 Peptidase_M16_C: Pept 99.1 2.8E-10 6E-15 107.6 8.9 156 167-325 1-184 (184)
28 KOG0961 Predicted Zn2+-depende 98.8 1.9E-07 4.2E-12 98.4 15.7 268 366-665 27-329 (1022)
29 KOG2019 Metalloendoprotease HM 98.2 1.5E-05 3.3E-10 84.7 11.6 271 366-669 60-369 (998)
30 PF03410 Peptidase_M44: Protei 93.9 0.16 3.5E-06 52.8 7.0 156 14-213 27-191 (590)
31 PHA03081 putative metalloprote 91.9 0.37 8.1E-06 50.3 6.4 160 14-213 27-191 (595)
32 PF03410 Peptidase_M44: Protei 89.8 3.1 6.6E-05 43.7 10.6 64 548-617 151-214 (590)
33 PHA03081 putative metalloprote 82.1 14 0.0003 39.1 10.7 63 549-617 152-214 (595)
34 PF08367 M16C_assoc: Peptidase 56.2 26 0.00056 34.6 6.0 75 24-100 109-193 (248)
35 PF05838 Glyco_hydro_108: Glyc 32.4 45 0.00098 26.6 2.7 25 162-186 39-64 (83)
36 PF01729 QRPTase_C: Quinolinat 22.0 89 0.0019 28.8 3.1 43 162-204 103-146 (169)
37 PF11460 DUF3007: Protein of u 20.3 1.3E+02 0.0029 24.9 3.4 32 294-325 71-102 (104)
No 1
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-107 Score=831.38 Aligned_cols=665 Identities=58% Similarity=0.934 Sum_probs=619.2
Q ss_pred CceeecCCCcEEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhH
Q 005848 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDF 80 (674)
Q Consensus 1 ~~~~~~d~~~~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~ 80 (674)
+|++++|+|++|+++|+++|.+.+|++|+|||.++|||.+||.+++|++||++++.+++||+|+.|+|.|++++++++||
T Consensus 66 lhl~reD~N~vFsI~FrTpp~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT~pD~T~yPfattN~kDf 145 (998)
T KOG2019|consen 66 LHLDREDENNVFSIVFRTPPKDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFTAPDYTFYPFATTNTKDF 145 (998)
T ss_pred EeeccCCCCceeEEEeecCCCccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhccCCCcceeecccCChHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhCCCCccccchhhhcccccccCCCCC---CccchhHHHHHhhhccCChHHHHHHHHHHHhCCCCCCCCC
Q 005848 81 YNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSE---DITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVD 157 (674)
Q Consensus 81 ~~~l~l~~d~~~~P~~~~~~~~f~~e~~~~~~~~~~~---~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~ 157 (674)
.++.++|+|+.+.|.+.+.+ |.|||||+|.+++.. +..+|+||++||++..++|++++...+++.+||++.|+..
T Consensus 146 ~NL~dVYLDAtffPklr~~d--F~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~S~~~~if~~~~Qq~L~p~~tYgv~ 223 (998)
T KOG2019|consen 146 YNLRDVYLDATFFPKLRKLD--FQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQYSDPDYIFGMLFQQALFPENTYGVN 223 (998)
T ss_pred HHHHHHhhhcccchHHHhhh--hhhhcceeecCCCCCCcccceeeeeeeecccccccChhHHHHHHHHHhhCcccccccc
Confidence 99999999999999999999 999999999876544 4559999999999999999999999999999999999999
Q ss_pred CCCCcCccCCCCHHHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhh---------------------------------
Q 005848 158 SGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILS--------------------------------- 204 (674)
Q Consensus 158 ~~G~~~~i~~lt~~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~--------------------------------- 204 (674)
++|+|.+|+.||++++++||++||||+|+.|+.+||++.++.+.+++
T Consensus 224 SGGDPl~IpdLt~eelk~FHr~~YHPSNAri~tYGn~Pl~~~l~~l~e~~~~~sk~~~s~kv~~qk~f~kp~rvve~~p~ 303 (998)
T KOG2019|consen 224 SGGDPLDIPDLTYEELKEFHRQHYHPSNARIFTYGNFPLEDLLKQLEEDFSPFSKRELSSKVTFQKLFDKPRRVVEKGPA 303 (998)
T ss_pred CCCCcccCccccHHHHHHHHHhccCCCcceeEeecCchHHHHHHHHHHhhcccccccccCccccccccccCceeeeecCC
Confidence 99999999999999999999999999999999999999999998887
Q ss_pred --------------------------------------------------------------------------------
Q 005848 205 -------------------------------------------------------------------------------- 204 (674)
Q Consensus 205 -------------------------------------------------------------------------------- 204 (674)
T Consensus 304 d~~~~p~Kq~~~s~s~L~~~p~d~~etfaL~~L~~Ll~~gpsSp~yk~LiESGLGtEfsvnsG~~~~t~~~~fsVGLqGv 383 (998)
T KOG2019|consen 304 DPGDLPKKQTKCSNSFLSNDPLDTYETFALKVLSHLLLDGPSSPFYKALIESGLGTEFSVNSGYEDTTLQPQFSVGLQGV 383 (998)
T ss_pred CCCCCccceeEEEEEeecCCchhHHHHHHHHHHHHHhcCCCccHHHHHHHHcCCCcccccCCCCCcccccceeeeeeccc
Confidence
Q ss_pred -----------------------------hcccccccccccccCCCCcchhHHHHHHhhhhcccCCCccccccccchHHH
Q 005848 205 -----------------------------EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMA 255 (674)
Q Consensus 205 -----------------------------~~~~~~~e~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~ 255 (674)
++.++++|++.++ ....+ |+.++...++.|.++.||++.|.+...++.
T Consensus 384 seediekve~lV~~t~~~lae~gfd~drieAil~qiEislk~-qst~f--GL~L~~~i~~~W~~d~DPfE~Lk~~~~L~~ 460 (998)
T KOG2019|consen 384 SEEDIEKVEELVMNTFNKLAETGFDNDRIEAILHQIEISLKH-QSTGF--GLSLMQSIISKWINDMDPFEPLKFEEQLKK 460 (998)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHhhhhhhc-cccch--hHHHHHHHhhhhccCCCccchhhhhhHHHH
Confidence 4456677777764 33334 899999999999999999999999999999
Q ss_pred HHHHHHccCCcchHHHHHHHhhccCCCeEEEEEecCcCchhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCC
Q 005848 256 LKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETP 335 (674)
Q Consensus 256 l~~~l~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~d~~~~~~~~~~~~~~l~~~~~~~s~eel~~~k~~~~~~~~~~~~~ 335 (674)
|+.++++. ++.+|+.++++|+.+|.|++++++.||+++.+.+.++++..|++.+..+++++++.+-+...++.+.|+
T Consensus 461 lk~~l~ek-~~~lfq~lIkkYilnn~h~~t~smqpd~e~~~~~~~eE~tkL~ek~~alteeD~~ei~k~~~eL~~kQ~-- 537 (998)
T KOG2019|consen 461 LKQRLAEK-SKKLFQPLIKKYILNNPHCFTFSMQPDPEFAEKLEQEEATKLEEKKAALTEEDLAEIAKAGEELREKQS-- 537 (998)
T ss_pred HHHHHhhh-chhHHHHHHHHHHhcCCceEEEEecCCchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhC--
Confidence 99999986 566999999999999999999999999999999999999999999999999999999987777777666
Q ss_pred CChhhhccCCCCCCCCCCCCCCCCCccccccCCceEEEeecCCCcEEEEEEEeeCCCCCcccccChHHHHHHhhhcCCCC
Q 005848 336 DPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKD 415 (674)
Q Consensus 336 ~~~e~l~~lp~l~~~di~~~~~~~~~~~~~~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Gt~~ 415 (674)
.|+++.|+|+|.++||++.+...++++...||++|.++..+||+|+|+++.++.++++++..+|+++||..|+++||+.
T Consensus 538 -tp~dlsClPtL~vsDIp~~~~~~~~~v~dingvkv~~~dl~tngi~Y~r~~~~l~~~p~eL~PylPlfc~sll~lGt~~ 616 (998)
T KOG2019|consen 538 -TPEDLSCLPTLNVSDIPKTIPYTKLEVGDINGVKVQRCDLFTNGITYTRVVFDLNSLPEELLPYLPLFCQSLLNLGTGD 616 (998)
T ss_pred -CccccccccccccccCCCCCCccceeeeeccCceeEEeeccCCceEEEEEeeccccCcHHhhcchHHHHHHHHhcCCCc
Confidence 5699999999999999999887788888999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcccceEEeeeeccCCCCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhh
Q 005848 416 LSFVQLDQLIGRKTGGISVYPFTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARM 495 (674)
Q Consensus 416 ~~~~el~~~i~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~~~~i~~~~~~~~ 495 (674)
.++.|+.++|.+++||+++++..+++.+.+.+.-.+.++..|+.++.+++++|+..++.++.|.+.++++.++++..+.+
T Consensus 617 lsf~el~qqI~rkTGGiS~~p~~~s~~~~d~p~~~i~~~~~~l~rn~~dlfel~n~il~e~~f~n~dkfkvlvk~s~s~~ 696 (998)
T KOG2019|consen 617 LSFVELEQQIGRKTGGISVSPLVSSDDGMDEPELGIVFSGSMLDRNADDLFELWNKILQETCFTNQDKFKVLVKQSASRM 696 (998)
T ss_pred ccHHHHHHHhhhhcCceeecceeccCCCCCccceeEEechhhhcCChhHHHHHHHHHhcccCcccHHHHHHHHHHHHHHh
Confidence 99999999999999999999998877788888888999999999999999999999999999998899999999999999
Q ss_pred hhhhccCcHHHHHHHHHhhcChhhhHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcc
Q 005848 496 ENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKN 575 (674)
Q Consensus 496 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~ 575 (674)
.+.+.++||.+|..++.+++.+.+++++.++|+.+.+++..+.+..+++|+.|.+.|.++.+.+.+.+||.+.|+.|-..
T Consensus 697 ~n~i~dsGH~~A~~rs~a~l~~ag~i~EqlgGl~ql~fl~~L~~~~d~d~~~i~~kL~eIrk~ll~~ng~~~~itAd~~q 776 (998)
T KOG2019|consen 697 TNGIADSGHGFAAARSAAMLTPAGWISEQLGGLSQLEFLHRLEEKVDNDWEPIVSKLTEIRKSLLNTNGMIVNITADPKQ 776 (998)
T ss_pred hccCCcccchhHhhhhhcccCcccchHhHhcchHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEecCccc
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999988
Q ss_pred hhhHHHHHHHHHhcCCCC-CCcccccccccCCCCcEEE--EcC-cCeeEEEEecccCCCCCCcchHHHHHHHHhcCccch
Q 005848 576 LKNSERFVGKFLDMLPTN-SPVERVKWKAHLPSANEAI--VIP-TQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLW 651 (674)
Q Consensus 576 ~~~~~~~l~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~~d~~al~vl~~iLg~s~L~ 651 (674)
...+++.+++|+..+|.. +......|....+-..+++ .+| .||+|++.+..++++++||-++++|++..|.+.+||
T Consensus 777 ~~~vEkav~kFl~~lp~e~p~g~~st~d~r~p~~~~~i~~~~P~fqvnyvgka~~~vpyt~~d~asl~vlS~~lt~k~Lh 856 (998)
T KOG2019|consen 777 LTNVEKAVEKFLDSLPRENPSGSKSTWDARLPLRSEAIRVVIPTFQVNYVGKAGLGVPYTHPDGASLQVLSKLLTNKWLH 856 (998)
T ss_pred chhHHHHHHHHHHhccccCCCCCccCccccCCCCceeEEEeccccchhhhhhhcccccCCCCCCcHHHHHHHHHHHHHHH
Confidence 888999999999999843 2222333444444444444 778 668999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCcccccCCCCCCC
Q 005848 652 DRVRVSGGAYGGFCDFDSHSGVL 674 (674)
Q Consensus 652 ~~IRekG~aYg~~~~~~~~~G~f 674 (674)
.+|||||||||.+|++++..|+|
T Consensus 857 ~evRekGGAYGgg~s~~sh~Gvf 879 (998)
T KOG2019|consen 857 DEVREKGGAYGGGCSYSSHSGVF 879 (998)
T ss_pred HHHHHhcCccCCccccccccceE
Confidence 99999999999999999999987
No 2
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=100.00 E-value=3.5e-101 Score=832.68 Aligned_cols=663 Identities=40% Similarity=0.698 Sum_probs=601.7
Q ss_pred CceeecCCCcEEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhH
Q 005848 1 MSVSNDDENKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDF 80 (674)
Q Consensus 1 ~~~~~~d~~~~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~ 80 (674)
+|+.++|+|++|.++++|+|.+.+|+||+|||++||||++||.+++|.+++++++++++||+|+.|+|+|++++.+++||
T Consensus 34 ~hi~~~d~~~vFsi~F~T~p~dstGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~NA~T~~D~T~YP~sS~~~~Df 113 (978)
T COG1026 34 AHIKNEDPNNVFSIAFKTEPHDSTGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFTFPDKTVYPASSANEKDF 113 (978)
T ss_pred EEecCCCcCceEEEEeecCCCCCCCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHhhccCCCcceeeccccCcchH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhCCCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHHHHhCCCCCCCCCCCC
Q 005848 81 YNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGG 160 (674)
Q Consensus 81 ~~~l~l~~d~~~~P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G 160 (674)
.++|.+|+|++++|.+.++. |.|||||+|.+++ ++++.+|||++||++..++|.+++++.+++.+||+..|++.+||
T Consensus 114 ~NLl~VYlDavf~PlL~~e~--F~QEgwr~e~~~~-~~l~~~GVVyNEMKGa~ss~~~~~~~~~~~slfp~~ty~~~SGG 190 (978)
T COG1026 114 YNLLSVYLDAVFHPLLTKES--FLQEGWRIEFKDE-SNLKYKGVVYNEMKGAYSSGESVLSRAMQQSLFPGTTYGVNSGG 190 (978)
T ss_pred HHHHHHHHHhhhCcccchHH--HhhhhhccccCCC-ccceeeeEEeehhcccccCchhHHHHHHHHhhCCCccccccCCC
Confidence 99999999999999999999 9999999999876 67889999999999999999999999999999999999999999
Q ss_pred CcCccCCCCHHHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhh------------------------------------
Q 005848 161 DPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILS------------------------------------ 204 (674)
Q Consensus 161 ~~~~i~~lt~~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~------------------------------------ 204 (674)
.|..|..||+|++++||++||+|+|+.|+++||+++++.++.++
T Consensus 191 ~P~~I~~LtyE~~r~FHkk~Y~pSN~~i~~yGni~~~~~L~~iee~~l~~~~k~~~~~~i~~~~~~~~~~~~~~~ypi~~ 270 (978)
T COG1026 191 DPKNIPDLTYEEFRAFHKKHYHPSNCKIFVYGNIPTERLLDFIEEKVLRPFGKRELDVPIPDQKAFKKPRRKVLEYPISF 270 (978)
T ss_pred CcccccccCHHHHHHHHHHhCCccceEEEEECCCCHHHHHHHHHHhhhccccccccCCCCCcccccCcccccceeeccCC
Confidence 99999999999999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 005848 205 -------------------------------------------------------------------------------- 204 (674)
Q Consensus 205 -------------------------------------------------------------------------------- 204 (674)
T Consensus 271 ~~~de~q~~~~lsWl~~~~~d~~~~lal~vL~~iLl~~~asPl~~~liesglg~~~~~g~~~~~~~~~~f~v~~~gv~~e 350 (978)
T COG1026 271 DEEDEDQGLLSLSWLGGSASDAEDSLALEVLEEILLDSAASPLTQALIESGLGFADVSGSYDSDLKETIFSVGLKGVSEE 350 (978)
T ss_pred CCCCCceeEEEEEEecCCcccHHHHHHHHHHHHHHccCcccHHHHHHHHcCCCcccccceeccccceeEEEEEecCCCHH
Confidence
Q ss_pred --------------------------hcccccccccccccCCCCcchhHHHHHHhhhhcccCCCccccccccchHHHHHH
Q 005848 205 --------------------------EASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKA 258 (674)
Q Consensus 205 --------------------------~~~~~~~e~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~l~~ 258 (674)
++.+++.|+..++. ...|.|+.++...+..|.++.+|...|+....++.||+
T Consensus 351 k~~~~k~lV~~~L~~l~~~gi~~~~ie~~~~q~E~s~ke~--~s~pfgl~l~~~~~~gw~~G~dp~~~Lr~~~~~~~Lr~ 428 (978)
T COG1026 351 KIAKLKNLVLSTLKELVKNGIDKKLIEAILHQLEFSLKEV--KSYPFGLGLMFRSLYGWLNGGDPEDSLRFLDYLQNLRE 428 (978)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhhh--cCCCccHHHHHHhccccccCCChhhhhhhHHHHHHHHH
Confidence 23444555555543 45566889999999999999999999999999999999
Q ss_pred HHHccCCcchHHHHHHHhhccCCCeEEEEEecCcCchhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCCCCh
Q 005848 259 RLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPP 338 (674)
Q Consensus 259 ~l~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~d~~~~~~~~~~~~~~l~~~~~~~s~eel~~~k~~~~~~~~~~~~~~~~ 338 (674)
.+.. +. ||+.|+++|+++|+|++++++.|+++..+++.+++.+.|++++..+++|+++++++..+++++.|.+++|.
T Consensus 429 ~le~--~~-~fe~LI~ky~l~N~h~~~v~~~Ps~~~~~~~ekee~e~L~~~~~~l~de~~~ki~~~~~~lke~Q~~~dse 505 (978)
T COG1026 429 KLEK--GP-YFEKLIRKYFLDNPHYVTVIVLPSPELEEKLEKEERELLQKRSSELTDEDLEKIIKDSKKLKERQDQPDSE 505 (978)
T ss_pred hhhc--Ch-HHHHHHHHHhhcCCccEEEEEecChHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCCch
Confidence 8864 33 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCCCCCCCCCCccccccCCceEEEeecCCCcEEEEEEEeeCCCCCcccccChHHHHHHhhhcCCCCCCH
Q 005848 339 EALRSVPSLSLRDIPKEPIRVPTEVGDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSF 418 (674)
Q Consensus 339 e~l~~lp~l~~~di~~~~~~~~~~~~~~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Gt~~~~~ 418 (674)
+.++++|++++.||++...+.+++....+..+|++++.+||+++|++++|+++.++.++.+|+++|...|...||+++++
T Consensus 506 ~~~~~lP~l~~~dvp~~~~k~~l~~~~~~~~~v~~~~~~tn~i~yl~~~~~~~~l~~~llpyL~L~~~~l~~lgt~~~~y 585 (978)
T COG1026 506 EDLATLPTLKLGDVPDPIEKTSLETEVSNEAKVLHHDLFTNGITYLRLYFDLDMLPSELLPYLPLFAFALTNLGTETYSY 585 (978)
T ss_pred hhhhhccccchhcCCCcccccceeeeccCCcceEEeecCCCCeEEEEEEeecCCCChhhhhhHHHHHHHHHhcCCCCcCH
Confidence 99999999999999999999888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccceEEeeeeccC-CCCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhhh
Q 005848 419 VQLDQLIGRKTGGISVYPFTSSI-HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMEN 497 (674)
Q Consensus 419 ~el~~~i~~~~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~~~~i~~~~~~~~~~ 497 (674)
.++.++|+.++||++++.+..+. .+.+.+.+.+.++++++.++++++++|+++++.++.|+|.+|++.++++.++++..
T Consensus 586 ~e~~~~i~~~TGgis~~~~~~~~~~~~~~~~~~~~i~~K~l~~k~~~~~~~i~~~l~~~~F~D~~Rlkell~q~~~~l~~ 665 (978)
T COG1026 586 KELLNQIERHTGGISVSLSVDTDPGDDGEYRPSFSISGKALRSKVEKLFELIREILANTDFHDRERLKELLEQYLSDLTS 665 (978)
T ss_pred HHHHHHHHHHhCCceeeEeeccCCCccccccceEEEEEEehhhhhhHHHHHHHHHHhcCCcCcHHHHHHHHHHHHhhhHH
Confidence 99999999999999999987543 34567889999999999999999999999999999998789999999999999999
Q ss_pred hhccCcHHHHHHHHHhhcChhhhHHHHhchhhHHHHHHHHHHHhhcCHH-HHHHHHHHHHHHHcCCCCcEEEEEeCCcch
Q 005848 498 RLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWA-GISSSLEEIRRSFLSREGCLINMTADGKNL 576 (674)
Q Consensus 498 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~-~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~ 576 (674)
+..++||.+|..++.+.++.++++.+.++|+.++++++++..++++..+ ++.+.|++++++++..+|+.+.+.|+.+..
T Consensus 666 ~vr~sG~~~A~~~~~s~~~~~~~l~e~~~Gl~q~k~i~~l~~~~~~~~~~ei~~kL~~l~~~i~~~~n~~i~i~~~~~~~ 745 (978)
T COG1026 666 SVRNSGHSIASSLANSRLSSAGALKELLNGLSQVKFLRELSSNFEENFEKEIADKLQALRKKIFQTNNLRIAIIGDIDKI 745 (978)
T ss_pred hhhccchHHHHHHhhcccccchhHHHHhcChhHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhcCceEEEEecChhhh
Confidence 9999999999999999999999999999999999999999999887776 899999999999999999989999999744
Q ss_pred hhHHHHHHHHHhcCCC-CCCc--cccccc---ccCCC-CcEEEEcCcCeeEEEEec--ccCCCCCCcchHHHHHHHHhcC
Q 005848 577 KNSERFVGKFLDMLPT-NSPV--ERVKWK---AHLPS-ANEAIVIPTQVNYVGKAA--NIFETGYKLNGSAYVISKHISN 647 (674)
Q Consensus 577 ~~~~~~l~~~~~~l~~-~~~~--~~~~~~---~~~~~-~~~~~~~~~~~~~v~~~~--~~~~~~~~d~~al~vl~~iLg~ 647 (674)
.+ .+++-+-++.. .... .+.++. ..... ..+.+.+|.+++|.+.++ ..+++.|||+++++|++++|++
T Consensus 746 ~~---~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~p~a~~~l~fs~~~~~y~hpd~~~l~vls~~L~~ 822 (978)
T COG1026 746 LD---LLENPLLKFLEHLLPGFELPTPPKNPHLDLISSLSEATIIPSPVAYNALAFSIGGLPYTHPDYAALQVLSEYLGS 822 (978)
T ss_pred HH---HHHHHhhhhhcccCcccccCCCCCCcchhhhccccceEEeccHHHHHHHhhhccCCCCCCccchHHHHHHHHhcc
Confidence 33 33343333321 0110 011111 11112 456777788877766555 4688999999999999999999
Q ss_pred ccchHHHhhcCCCCCcccccCCCCCCC
Q 005848 648 VWLWDRVRVSGGAYGGFCDFDSHSGVL 674 (674)
Q Consensus 648 s~L~~~IRekG~aYg~~~~~~~~~G~f 674 (674)
++||.+|||+|||||++++++...|+|
T Consensus 823 ~~lw~~IR~~GGAYGa~as~~~~~G~f 849 (978)
T COG1026 823 GYLWNKIREKGGAYGASASIDANRGVF 849 (978)
T ss_pred chhHHHHHhhccccccccccccCCCeE
Confidence 999999999999999999999888876
No 3
>PTZ00432 falcilysin; Provisional
Probab=100.00 E-value=5.3e-92 Score=820.03 Aligned_cols=669 Identities=35% Similarity=0.572 Sum_probs=577.9
Q ss_pred CceeecCC---CcEEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCH
Q 005848 1 MSVSNDDE---NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNT 77 (674)
Q Consensus 1 ~~~~~~d~---~~~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~ 77 (674)
+|+.++|+ +++|.+++++.+.+.+|+||+||||+|+||++||.++++..+.++.+|+++||+|+.|+|+|++.+.+.
T Consensus 104 l~~~~~d~~~~~~~f~i~f~T~~~d~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~gl~~~lNA~T~~D~T~Y~~~~~~e 183 (1119)
T PTZ00432 104 ISLKTNDSSGKEMCFDFYVPTPPHNDKGIPHILEHSVLSGSKKYNYKDSFSLLVQGGFNSFLNAYTFKDRTSYLFASTNE 183 (1119)
T ss_pred EEEecCCCccceeEEEEEecCCCCCCcchhHHHHHHHhCCCCCCCcccHHHHHHhcCcCCCccccCCCCceEEEeccCCH
Confidence 46777775 899999999999999999999999999999999999988888766677999999999999999988788
Q ss_pred hhHHHHHHHHHhhhhCCCCccccchhhhcccccccCCC--------------CCCccchhHHHHHhhhccCChHHHHHHH
Q 005848 78 KDFYNLVDVYFDAVFFPKCVEDFQTFQQEGWHFKLDNP--------------SEDITYKGVVFNEMKGVYSQPDNILGRA 143 (674)
Q Consensus 78 ~~~~~~l~l~~d~~~~P~~~~~~~~f~~e~~~~~~~~~--------------~~~~~~~~~v~~e~~~~~~~p~~~~~~~ 143 (674)
+++.++|++++|++++|.|.+++.+|.|||||+|++++ +.++.+|+||++||++..++|..++.+.
T Consensus 184 ~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kgVV~~Emk~~~~~p~~~~~~~ 263 (1119)
T PTZ00432 184 KDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSGIVYSEMKKRFSDPLSFGYSV 263 (1119)
T ss_pred HHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhhHHHHHHHHhhCCHHHHHHHH
Confidence 89999999999999999999987668999999998764 3445569999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCcCccCCCCHHHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhhhcccccc------------
Q 005848 144 AQQALFPDNAYGVDSGGDPKVIPKLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTI------------ 211 (674)
Q Consensus 144 ~~~~~~~~~p~~~~~~G~~~~i~~lt~~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~~~~~~~~------------ 211 (674)
+.+.+| +|||+++++|++++|+++|++++++||++||+|+||+|+++||+|+++++++++ ..|+.+
T Consensus 264 ~~~~lf-~~pY~~~~~G~~~~I~~lt~e~l~~Fh~~~Y~P~N~~l~v~Gdid~~~~l~~l~-~~f~~~~~~~~~~~~~~~ 341 (1119)
T PTZ00432 264 IYQNLF-SNVYKYDSGGDPKDIVELTYEELVEFYKTYYGPKTATVYFYGPNDVTERLEFVD-NYLTKHPKTGQLSHTAYR 341 (1119)
T ss_pred HHHHHh-CCCCCCCCCCChHhhccCCHHHHHHHHHHhcCccceEEEEEcCCCHHHHHHHHH-HHHhhccccccccccccc
Confidence 999999 999999999999999999999999999999999999999999999999988875 222000
Q ss_pred -------c-------cc-------ccc--------c-----CC-----------CC------------------------
Q 005848 212 -------E-------FS-------LRE--------N-----NT-----------GS------------------------ 222 (674)
Q Consensus 212 -------e-------~~-------~~~--------~-----~~-----------~~------------------------ 222 (674)
+ +. ... . +. ..
T Consensus 342 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~~~~~~~~~~~~~d~~~~~AL~VLs~lLggg~sS~L~q 421 (1119)
T PTZ00432 342 EDADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPKHNGSKDYDKSLIDPVDYLALLVLNYLLLGTPESVLYK 421 (1119)
T ss_pred ccccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCccccccccccccCCHHHHHHHHHHHHHHcCCCccHHHH
Confidence 0 00 000 0 00 00
Q ss_pred --------------------------------------------------------------------------------
Q 005848 223 -------------------------------------------------------------------------------- 222 (674)
Q Consensus 223 -------------------------------------------------------------------------------- 222 (674)
T Consensus 422 ~LrE~GLa~svv~~~~~~~~~~~~f~I~l~g~~~~~~~~~~~~~~ev~~~I~~~L~~l~~eGi~~eele~a~~qlef~~r 501 (1119)
T PTZ00432 422 ALIDSGLGKKVVGSGLDDYFKQSIFSIGLKGIKETNEKRKDKVHYTFEKVVLNALTKVVTEGFNKSAVEASLNNIEFVMK 501 (1119)
T ss_pred HHHhcCCCcCCCcCcccCCCCceEEEEEEEcCChHhccchhhhHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhh
Confidence
Q ss_pred ------cchhHHHHHHhhhhcccCCCccccccccchHHHHHHHHHccCCcchHHHHHHHhhccCCCeEEEEEecCc--Cc
Q 005848 223 ------FPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDP--EK 294 (674)
Q Consensus 223 ------~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~l~~~l~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~d~--~~ 294 (674)
+|.|+.++......|.++.+|...|.+...++.|++++.. ++.||+.++++++++|.|++++++.|++ +.
T Consensus 502 E~~~~~~p~gl~~~~~~~~~~~~g~dp~~~l~~~~~l~~lr~~~~~--~~~y~e~Li~k~ll~N~h~~~v~~~p~~s~~~ 579 (1119)
T PTZ00432 502 ELNLGTYPKGLMLIFLMQSRLQYGKDPFEILRFEKLLNELKLRIDN--ESKYLEKLIEKHLLNNNHRVTVHLEAVESSKY 579 (1119)
T ss_pred hccCCCCCcHHHHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHHHhc--ccHHHHHHHHHHccCCCeeeEEEEecCCcccH
Confidence 0000111111122444555666666677778888888842 3459999999999999999999999999 99
Q ss_pred hhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCCCChhhhccCCCCCCCCCCCCCCCCCccc-----------
Q 005848 295 ASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEV----------- 363 (674)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~s~eel~~~k~~~~~~~~~~~~~~~~e~l~~lp~l~~~di~~~~~~~~~~~----------- 363 (674)
.++..+.++++|++++..+|+++++++.+++++++++|++++++|.+++||.++++||++..+.+|..+
T Consensus 580 ~~~~~~~e~~~L~~~~~~Ls~ee~~~i~~~~~~l~~~q~~~~~~e~l~~lP~l~~~DI~~~~~~~~~~~~~~~~~~~~~~ 659 (1119)
T PTZ00432 580 EKEFNKLVKDELKERLSHLTKEQVDEMEKAYEKFKKEREADDDPEHLDSFPILSLSDLNKETEEIPTKLYKLSSDSLKEN 659 (1119)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCChhHHhhcCCCcHHHcCCcccCCcchhhhccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999888777654
Q ss_pred ----cccCCceEEEeecCCCcEEEEEEEeeCCCCCcccccChHHHHHHhhhcCCCCCCHHHHHHHHhhcccceEEeeeec
Q 005848 364 ----GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTS 439 (674)
Q Consensus 364 ----~~~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Gt~~~~~~el~~~i~~~~g~l~~~~~~~ 439 (674)
...+|+++++++.+||||+|+++.|++..++.++++|+++|+.+|.+.||++++++|+..+|+..+||+++++...
T Consensus 660 ~~~~~~~~~~~~~~~~~~TnGi~y~~~~fdl~~l~~e~~~yl~L~~~~l~~~gT~~~s~~el~~~i~~~tGg~~~~~~~~ 739 (1119)
T PTZ00432 660 MDLDSDGGSVTVLVHPIESRGILYLDFAFSLDSLTVDELKYLNLFKALLKENGTDKLSSEEFTYKREKNLGGLSASTAFY 739 (1119)
T ss_pred ccccccCCCcceEEEecCCCCeEEEEEEecCCCCCHHHHhhHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCeEEEEEEe
Confidence 3468999999999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred cC------CCCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhhhhhccCcHHHHHHHHHh
Q 005848 440 SI------HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDA 513 (674)
Q Consensus 440 ~~------~~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~ 513 (674)
.. .+.+.+.+++.++++||.++++++++|+.++++++.|++.+|+++++++.++++++.+.++||.+|..++.+
T Consensus 740 ~~~~~~~~~~~~~~~~~~~v~~k~l~~~~~~~~~l~~eil~~~~f~d~~rl~~il~~~~~~~~~~~~~~Gh~~A~~~~~s 819 (1119)
T PTZ00432 740 SETNNLTYDDPYNGVGYLNVRAKVLKHKVNEMVDIVLEALKDADFSNSKKGVEILKRKINGMKTVFSSKGHKFALKRMKS 819 (1119)
T ss_pred ccccccccCcccccceEEEEEEEEhhhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh
Confidence 33 345567889999999999999999999999999999998889999999999999999999999999999999
Q ss_pred hcChhhhHHHHhchhhHHHHHHHHH-HHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCC
Q 005848 514 KLNTAGWISEQMGGVSYLEFLQALE-EKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPT 592 (674)
Q Consensus 514 ~~~~~~~~~~~~~g~~~~~~l~~l~-~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~ 592 (674)
.++..+.+.+.++|++++.+|+++. +.++++++.+.+.|+++++++|+++|++++|+|+.+..+.+.+.+..++..|+.
T Consensus 820 ~~S~~~~~~e~~~G~~~~~fl~~l~~~~~e~~~~~v~~~L~~i~~~i~~~~~l~~~vt~~~~~~~~~~~~~~~~~~~l~~ 899 (1119)
T PTZ00432 820 KFSVSDYADELVNGYSQLLFLKETLVPLAEKDWSKVESKLNEIRNKLLSMKNLTVNVTGDSELLDSLLDDSTTFLKKLSS 899 (1119)
T ss_pred cCCHHHHHHHHhcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCcCCcEEEEEeCHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999988 567778889999999999999999999999999998788888888888888853
Q ss_pred CC---C--ccccccc--------ccCCCCcEEEEcCcCeeEEEEecccCCCCCCcchHHHHHHHHhcCccchHHHhhcCC
Q 005848 593 NS---P--VERVKWK--------AHLPSANEAIVIPTQVNYVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVRVSGG 659 (674)
Q Consensus 593 ~~---~--~~~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~al~vl~~iLg~s~L~~~IRekG~ 659 (674)
.. . ....++. ......++.+.+|++|+|++.|++....++++.+++.|+.++|++++||++||++||
T Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~p~~V~yv~~~~~~~~~~~~~~~~l~Vl~~~L~~~yLw~~IR~~GG 979 (1119)
T PTZ00432 900 TFKENDNKSSDKVWVKEVLDKKLMESVDKNEFIVLPTRVNFVGMGGKLFDKSDKVDGSFQVIVHYLKNSYLWKTVRMSLG 979 (1119)
T ss_pred ccccccccccccccccccccccccCCcccceEEEccCceeEEEEecccccCCCccCHHHHHHHHHHccccchHHHcccCC
Confidence 21 1 1111222 112236789999999999999988788889999999999999999999999999999
Q ss_pred CCCcccccCCCCCCC
Q 005848 660 AYGGFCDFDSHSGVL 674 (674)
Q Consensus 660 aYg~~~~~~~~~G~f 674 (674)
|||+++++.. .|.|
T Consensus 980 AYG~~~~~~~-~G~~ 993 (1119)
T PTZ00432 980 AYGVFADLLY-TGHV 993 (1119)
T ss_pred ccccCCccCC-CCeE
Confidence 9999998875 4654
No 4
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-52 Score=428.52 Aligned_cols=641 Identities=22% Similarity=0.290 Sum_probs=480.1
Q ss_pred EEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHHhhhhC
Q 005848 14 IVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFF 93 (674)
Q Consensus 14 ~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~d~~~~ 93 (674)
+...+|..++.|++|-|||++|+||++||.+.++...-++.+ ++.||+|..|+|.|.++++..+.|-++|.+|+|.+..
T Consensus 46 f~v~TEa~~d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~l-~dtNAwTDtD~T~YtLStag~dGFlklLPvy~dHiL~ 124 (1022)
T KOG0961|consen 46 FSVVTEADSDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCL-ADTNAWTDTDHTAYTLSTAGSDGFLKLLPVYIDHILT 124 (1022)
T ss_pred EEeeeeecCCCCCchhHHHHhhhccccCCcccHHHHhhcchh-cccccccccCcceEEeecccccchHHHhHHHHHhhcC
Confidence 356789999999999999999999999999998877766664 4599999999999999999999999999999999999
Q ss_pred CCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHHHHhCC-CCCCCCCCCCCcCccCCCCHHH
Q 005848 94 PKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFP-DNAYGVDSGGDPKVIPKLTFEE 172 (674)
Q Consensus 94 P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~-~~p~~~~~~G~~~~i~~lt~~~ 172 (674)
|.+.+++ |..|++|+..++. ++|||+.||+..++.-..++.+..++.+|| .++|+...+|.+..++.+|.|.
T Consensus 125 P~Ltdea--f~TEVyHI~geg~-----d~GVVySEMq~~es~~~~im~~~~~~~~yP~~sgY~~eTGG~~knLR~lt~ek 197 (1022)
T KOG0961|consen 125 PMLTDEA--FATEVYHITGEGN-----DAGVVYSEMQDHESEMESIMDRKTKEVIYPPFSGYAVETGGRLKNLRELTLEK 197 (1022)
T ss_pred cccchhh--hhhheeeecCCCC-----ccceeehhhhhhhcccchhhhhhhheeecCCCCCceeccCCChhhHHHhhHHH
Confidence 9999999 9999999976543 489999999999999999999999999998 8999999999999999999999
Q ss_pred HHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhh-------------------------------hcccccccccccc----
Q 005848 173 FKEFHRKYYHPSNARIWFYGDDDPNERLRILS-------------------------------EASMNTIEFSLRE---- 217 (674)
Q Consensus 173 l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~-------------------------------~~~~~~~e~~~~~---- 217 (674)
+++||+++|+|+|++++++|+||+++++...+ +...+.+||+...
T Consensus 198 IR~yHK~~Y~~sN~cviVcG~v~~d~lL~~m~~~~neile~~s~vP~~~~rPf~~tn~~~~i~e~t~~tVefp~~Des~G 277 (1022)
T KOG0961|consen 198 IRDYHKKFYHLSNMCVIVCGMVDHDQLLEIMNNVENEILEHMSTVPDHFPRPFSFTNALSDIKESTVHTVEFPTDDESRG 277 (1022)
T ss_pred HHHHHHHhccccceEEEEecCcCHHHHHHHHHHHHhhhhhccccCCCCCCCCcccccCcccCCccceeeeecCCcccccc
Confidence 99999999999999999999999999998776 0000011111000
Q ss_pred -------------------------------------------cCCC--------------------Ccc---------h
Q 005848 218 -------------------------------------------NNTG--------------------SFP---------R 225 (674)
Q Consensus 218 -------------------------------------------~~~~--------------------~~p---------~ 225 (674)
++.. ..| +
T Consensus 278 ~v~~aW~g~s~sD~~t~~a~~vL~dyls~savapf~~~fVeieDP~assv~f~~~~~vrc~i~L~f~gVP~EKi~~~~~k 357 (1022)
T KOG0961|consen 278 AVEVAWFGHSPSDLETHSALHVLFDYLSNSAVAPFQKDFVEIEDPLASSVSFHIAEGVRCDIRLNFAGVPVEKIDECAPK 357 (1022)
T ss_pred eEEEEEcCCCHHHhhhHHHHHHHHHHhccccccccccceEEecCccccceeeeeecccceeEEEeecCCcHHHhhhhhHH
Confidence 0000 000 0
Q ss_pred hHHHH-----------HHhh--hhcc----------------------cCCCcccccc-ccchHHHHHHHHHccCCcchH
Q 005848 226 GLSLM-----------LRSM--GKWI----------------------YDMNPFEPLK-YEKPLMALKARLAEEGSKAVF 269 (674)
Q Consensus 226 ~~~~~-----------~~~~--~~~~----------------------~~~~~~~~l~-~~~~l~~l~~~l~~~~s~~~~ 269 (674)
-+.++ ...+ ..|. +++..-..+. ..+.++.++. |.++ +...|
T Consensus 358 ~l~~l~et~~iDm~Rm~~~i~~t~~~yL~nlE~n~~s~fms~ii~d~~ygnedg~~l~~~lk~l~~~~~-L~~w-~~kdW 435 (1022)
T KOG0961|consen 358 FLDKLVETANIDMERMGYLIDQTILNYLVNLETNAPSDFMSHIIGDQLYGNEDGELLKKRLKELDFLKK-LKSW-PAKDW 435 (1022)
T ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHhhhhhccCcchhHHHHHHHhHHHHHH-Hhhc-cHHHH
Confidence 00000 0000 0110 1111000000 0112232222 3322 45589
Q ss_pred HHHHHHhhccCCCeEEEEEecCcCchhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCCCChhhhccCCCCCC
Q 005848 270 SPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSL 349 (674)
Q Consensus 270 ~~l~~~~~~~~~~~~~i~~~~d~~~~~~~~~~~~~~l~~~~~~~s~eel~~~k~~~~~~~~~~~~~~~~e~l~~lp~l~~ 349 (674)
..|+.+++.+|+ .++|+..|+.+++++.+++..++|+++...+.++.++++-+.++..+..+.+.-+...|..+.-..+
T Consensus 436 ~~Llnk~Fven~-s~tVia~Ps~em~e~i~kE~~~~i~~r~~~lg~~gle~l~k~L~~ak~~N~~~~p~~ll~~f~I~~p 514 (1022)
T KOG0961|consen 436 VQLLNKYFVENP-SATVIAVPSEEMVEKIAKEEEKRIAARCEKLGKKGLEELGKSLEAAKLENTANHPSALLLDFLIVKP 514 (1022)
T ss_pred HHHHHHHhccCC-CeEEEecCcHHHHHHHHHHHHHHHHHHHHHhChhhHHHHHHHHHHhhhcccCCCCHHHHhheeccCc
Confidence 999999998554 5778899999999999999999999999999999999999988888887777655554444321111
Q ss_pred CCC---CCCCCC-----CCcc-------ccccCC--ceEEEeecCCCcEEEEEEEeeCCCCCcccccChHHHHHHhhh--
Q 005848 350 RDI---PKEPIR-----VPTE-------VGDING--VKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKE-- 410 (674)
Q Consensus 350 ~di---~~~~~~-----~~~~-------~~~~nG--~~v~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~l~~-- 410 (674)
+.| ++...+ -|.+ .+.... ..+-++..|+. .|.+.++++..+++-..++|+.+|+.++..
T Consensus 515 eS~ef~~~~~v~t~~s~~pfdne~~~~~~T~~~~fp~fi~l~h~ps~-Fvel~fl~dss~i~~sl~pYl~~f~~l~~~~p 593 (1022)
T KOG0961|consen 515 ESLEFFDRFPVQTLTSNSPFDNELTPQQSTFLAQFPFFINLHHCPSK-FVELFFLLDSSNISISLRPYLFLFTDLLFESP 593 (1022)
T ss_pred hheeeeeccceeeccCCCCCCccccceeecccccCCceeecccCchH-HHhHhhhhccccCchhhhhHHHHHHHHHhcCH
Confidence 111 111100 0100 011222 33334455655 777888889999998899999999987643
Q ss_pred ---cCCCC----CCHHHHHHHHhhcccceEEeeeeccCCCCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHH
Q 005848 411 ---MGTKD----LSFVQLDQLIGRKTGGISVYPFTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQR 483 (674)
Q Consensus 411 ---~Gt~~----~~~~el~~~i~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~ 483 (674)
.||-. .+.+|+++.+.....+.++.++. .+.+.+.+.+.++|-.++++..+.|++-++....|| ++|
T Consensus 594 a~ldgtiptp~~~s~~~v~~~~~s~~id~si~~g~-----~G~~~~lvn~~Ikv~a~~Y~~~v~Wi~~~l~~~VfD-~~R 667 (1022)
T KOG0961|consen 594 AMLDGTIPTPVLTSADDVAKHFTSDLIDHSIQVGV-----SGLYDRLVNLRIKVGADKYPLLVKWIQIFLQGVVFD-PSR 667 (1022)
T ss_pred HHhcCCCCcchhhhHHHHHHHHHhhhhhhhhcccc-----cccchhheeEEEEEccCCcchhHHHHHHHhhhhccC-HHH
Confidence 24433 25677777777776666666543 345668899999999999999999999999999999 699
Q ss_pred HHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhhhHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCC
Q 005848 484 FKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSRE 563 (674)
Q Consensus 484 ~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~ 563 (674)
+..++++...++..+.+ +|..++..+..+.+|....+......+...+-+++|.++++++.+.|.+.++.+++-...-+
T Consensus 668 i~~~~~~~l~~i~~~KR-dg~~vlss~~~~~lY~~~slk~s~d~L~~Ek~l~ei~~~v~n~~~~Il~~~e~mR~y~l~~n 746 (1022)
T KOG0961|consen 668 IHQCAQKLLGEIRDRKR-DGCTVLSSAVASMLYGKNSLKISFDELVLEKLLEEISKDVMNNPEAILEKLEQMRSYALFSN 746 (1022)
T ss_pred HHHHHHHHHhhhhhhhc-CccEehHHHHHHHHhcccchhhcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999887 56688888999999999999999999999999999999999999999999999988556668
Q ss_pred CcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCcccccccc--------cCCC--CcEEEEcCcC-eeEEEEeccc-CCCC
Q 005848 564 GCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKA--------HLPS--ANEAIVIPTQ-VNYVGKAANI-FETG 631 (674)
Q Consensus 564 n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--------~~~~--~~~~~~~~~~-~~~v~~~~~~-~~~~ 631 (674)
.+.+.|+||++.++.....|..+.....-+.+......+. ...+ +-.++.+|.. .+.+....|+ .++.
T Consensus 747 ~~~ihvvgDI~kid~~~~~Wn~l~~~~~~~nP~~~f~~tf~~~~~~s~e~gsssk~~~I~~p~sESs~l~~sip~~~~w~ 826 (1022)
T KOG0961|consen 747 GVNIHVVGDIDKIDPKMLSWNWLQADPRFGNPGHQFSATFEAGENVSLELGSSSKELLIGVPGSESSFLYQSIPLDANWN 826 (1022)
T ss_pred ceEEEEEeehhcCCccccCchhhhcCcccCCchhhcccccccCcccceeccCCcceeEecCCCccccceeeecccccccC
Confidence 8999999999988888777877776654433221111110 1112 2233445543 3466677776 7799
Q ss_pred CCcchHHHHHHHHhc--CccchHHHhhcCCCCCcccccCCCCCC
Q 005848 632 YKLNGSAYVISKHIS--NVWLWDRVRVSGGAYGGFCDFDSHSGV 673 (674)
Q Consensus 632 ~~d~~al~vl~~iLg--~s~L~~~IRekG~aYg~~~~~~~~~G~ 673 (674)
||.++...+++++|| .+.+|+.||..|+|||+++...++.|.
T Consensus 827 dpel~~~~l~~~YL~~~eGPfW~~IRG~GLAYGanm~~~~d~~~ 870 (1022)
T KOG0961|consen 827 DPELIPAMLFGQYLSQCEGPFWRAIRGDGLAYGANMFVKPDRKQ 870 (1022)
T ss_pred CcchhHHHHHHHHHHhcccchhhhhcccchhccceeEEeccCCE
Confidence 999999999999999 889999999999999999988877764
No 5
>PRK15101 protease3; Provisional
Probab=100.00 E-value=6.3e-50 Score=474.09 Aligned_cols=603 Identities=14% Similarity=0.095 Sum_probs=410.5
Q ss_pred cEEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHHh
Q 005848 10 KVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYFD 89 (674)
Q Consensus 10 ~~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~d 89 (674)
.+|++|++.||.+..|+|||+|||+|+||++||..+.+.+.+ +.+|+++||+|+.|+|+|++ .++.++++.+|+++.+
T Consensus 70 l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l-~~~Gg~~NA~T~~d~T~y~~-~~~~~~l~~aL~~~ad 147 (961)
T PRK15101 70 LALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFL-KKHGGSHNASTASYRTAFYL-EVENDALPPAVDRLAD 147 (961)
T ss_pred EEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHH-HHhCCCccceECCCceEEEE-EcCHHHHHHHHHHHHH
Confidence 368899999999999999999999999999998654477877 45699999999999999997 5678999999999999
Q ss_pred hhhCCCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCC-
Q 005848 90 AVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKL- 168 (674)
Q Consensus 90 ~~~~P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~i~~l- 168 (674)
++.+|.|++++ +++| |++|.+|++...++|..++.+.+.+.+|++|||+++.+|++++|.++
T Consensus 148 ~~~~P~f~~~~--~erE---------------~~~v~~E~~~~~~~~~~~~~~~~~~~~~~~hp~~~~~~G~~etl~~~~ 210 (961)
T PRK15101 148 AIAEPLLDPKN--ADRE---------------RNAVNAELTMARSRDGMRMAQVSAETINPAHPGSRFSGGNLETLSDKP 210 (961)
T ss_pred HHhccCCCHHH--HHHH---------------HHHHHHHHHHhcCCHHHHHHHHHHhhCCCCCCcccCCCCCHHHhhcCC
Confidence 99999999999 9887 99999999988889999999999999999999999999999999997
Q ss_pred ---CHHHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhhhcccccccccccccCCCCcch-hHHHHHHhh----------
Q 005848 169 ---TFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFPR-GLSLMLRSM---------- 234 (674)
Q Consensus 169 ---t~~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~~~~~~~~e~~~~~~~~~~~p~-~~~~~~~~~---------- 234 (674)
++++|++||++||+|+||+|+|+||+|++++.++++ ..|+.++...........|. ........+
T Consensus 211 ~~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~~~~l~~~~~-~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (961)
T PRK15101 211 GSKLQDALVDFYQRYYSANLMKAVIYSNQPLPELAKLAA-DTFGRVPNKNASVPEITVPVVTDAQKGIIIHYVPAQPRKV 289 (961)
T ss_pred chHHHHHHHHHHHHhCcccceEEEEEcCCCHHHHHHHHH-HHhccCCCCCCCCCCCCCCCCCHHHcCeEEEEEECCCCcE
Confidence 699999999999999999999999999999999995 77776643221100000000 000000000
Q ss_pred --hhcccCCCccccccccchHHHHHHHHHccCCcchHHHHHHHhhc------------cCCCeEEEEEecCcC---chhh
Q 005848 235 --GKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYIL------------NNPHCVTVEMQPDPE---KASR 297 (674)
Q Consensus 235 --~~~~~~~~~~~~l~~~~~l~~l~~~l~~~~s~~~~~~l~~~~~~------------~~~~~~~i~~~~d~~---~~~~ 297 (674)
-.|..... .... .......+...++...++++++.+.++.+. .+...+.+.+.+.++ ..++
T Consensus 290 l~l~~~~p~~-~~~~-~~~~~~~l~~ll~~~~~g~l~~~L~~~gla~~v~s~~~~~~~~~~g~f~i~~~~~~~~~~~~~~ 367 (961)
T PRK15101 290 LRVEFRIDNN-SAKF-RSKTDEYISYLIGNRSPGTLSDWLQKQGLAEGISAGADPMVDRNSGVFAISVSLTDKGLAQRDQ 367 (961)
T ss_pred EEEEEecCCc-HHHH-hhCHHHHHHHHhcCCCCCcHHHHHHHcCccceeeeccccccCCCceEEEEEEEcChHHHHhHHH
Confidence 00100000 0000 011234455556655445466665444221 012235666666664 5667
Q ss_pred HHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHhCCCCC---------------hhhh-cc-----------------
Q 005848 298 DEAAEKEILAKV-KSSMTKEDLAELARATEELRLKQETPDP---------------PEAL-RS----------------- 343 (674)
Q Consensus 298 ~~~~~~~~l~~~-~~~~s~eel~~~k~~~~~~~~~~~~~~~---------------~e~l-~~----------------- 343 (674)
..+.+.++|+.+ +.++++++++++|+.......+++...+ ++.+ ..
T Consensus 368 v~~~i~~~i~~l~~~g~~~~el~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~ 447 (961)
T PRK15101 368 VVAAIFSYLNLLREKGIDKSYFDELAHVLDLDFRYPSITRDMDYIEWLADTMLRVPVEHTLDAPYIADRYDPKAIKARLA 447 (961)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHhccccCCCCCChHHHHHHHHHHhhhCCHHHheeCchhhhcCCHHHHHHHHh
Confidence 778888999988 8999999999999865432222211111 0000 00
Q ss_pred -C-----------CCCCC-------------CCCC-------------------CCCCCC---------------Ccccc
Q 005848 344 -V-----------PSLSL-------------RDIP-------------------KEPIRV---------------PTEVG 364 (674)
Q Consensus 344 -l-----------p~l~~-------------~di~-------------------~~~~~~---------------~~~~~ 364 (674)
+ |..+. ++|+ ....-+ |....
T Consensus 448 ~l~~~n~~i~~~~~~~~~~~~~~~~~~~Y~~~~i~~~~~~~~~~~~~~~~l~lP~~n~fip~~~~~~~~~~~~~~p~~i~ 527 (961)
T PRK15101 448 EMTPQNARIWYISPQEPHNKTAYFVDAPYQVDKISEQTFADWQQKAQNIALSLPELNPYIPDDFSLIKADKAYKHPELIV 527 (961)
T ss_pred hcCHhHEEEEEEeCCCCCCccccccCCcceeecCCHHHHHHHhcCCCCccCCCCCCCCccCCCCeeccCCCCCCCCeEEE
Confidence 0 11000 0110 000000 11113
Q ss_pred ccCCceEEEeecC---CCcEEEEEEEeeCCCCCc--ccccChHHHHHHhhhcCCCCCCHHHHHHHHhhcccceEEeeeec
Q 005848 365 DINGVKVLQHDLF---TNDVLYTEVVFDMSSLKQ--ELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTS 439 (674)
Q Consensus 365 ~~nG~~v~~~~~~---~~~~v~~~~~~~~g~~~~--~~~~~~~~~~~~l~~~Gt~~~~~~el~~~i~~~~g~l~~~~~~~ 439 (674)
..||++|++.+.+ ..|.+++.+.|..+...+ .......++..++ +.+..++....+..|.+++.+ ..
T Consensus 528 ~~~g~~vw~~~d~~f~~~Pk~~i~~~~~~~~~~~~~~~~~l~~L~~~ll------~~~l~e~~y~a~~aG~~~~~~-~~- 599 (961)
T PRK15101 528 DEPGLRVVYMPSQYFADEPKADISLVLRNPKAMDSARNQVLFALNDYLA------GLALDQLSNQASVGGISFSTN-AN- 599 (961)
T ss_pred cCCCeEEEEeCCCccccCCCEEEEEEEeCCCccCCHHHHHHHHHHHHHH------HHHHHHHhchHHhcCcEEEEc-cC-
Confidence 4689999999887 689999999999887643 3334566666665 346777888888888777777 33
Q ss_pred cCCCCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhh
Q 005848 440 SIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAG 519 (674)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 519 (674)
+.+.+++++++++++.+++++.+++.+|.|+ +++++.+....+..+.+...+.+...+...+ ..+..|
T Consensus 600 ---------~g~~i~v~g~s~~l~~ll~~l~d~l~~~~~~-~~~fe~~k~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~ 667 (961)
T PRK15101 600 ---------NGLMVNANGYTQRLPQLLQALLEGYFSFTPT-EEQLAQAKSWYREQLDSAEKGKAYEQAIMPA--QMLSQV 667 (961)
T ss_pred ---------CCEEEEEEecChhHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHHHhhhcccCcHHHHHHHH--HHHhcC
Confidence 8899999999999999999999999999998 4666666666666665444333333332211 223345
Q ss_pred hHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCc--c
Q 005848 520 WISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPV--E 597 (674)
Q Consensus 520 ~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~--~ 597 (674)
+|... .++.+.|..++ .++|++||+++|.+.|++++|+||++ .+++.++++++++.|+..+.. .
T Consensus 668 py~~~---~~~~~~l~~it----------~edl~~f~~~~~~~~~~~~~v~GNi~-~~ea~~l~~~~~~~l~~~~~~~~~ 733 (961)
T PRK15101 668 PYFER---DERRKLLPSIT----------LKDVLAYRDALLSGATPEFLVVGNLT-EEQVTTLARDVQKQLGADGTEWWR 733 (961)
T ss_pred CCCCH---HHHHHHHhcCC----------HHHHHHHHHHHHHhceEEEEEEcCCC-HHHHHHHHHHHHHHhccCCccccc
Confidence 54321 23444555443 58999999999999999999999998 678999999998888643210 0
Q ss_pred cccccccCCCCcEEEEc-C-cCeeEEEEecccCCCCCCcchHHHHHHHHhc---CccchHHHhhc-CCCCCcccccCCCC
Q 005848 598 RVKWKAHLPSANEAIVI-P-TQVNYVGKAANIFETGYKLNGSAYVISKHIS---NVWLWDRVRVS-GGAYGGFCDFDSHS 671 (674)
Q Consensus 598 ~~~~~~~~~~~~~~~~~-~-~~~~~v~~~~~~~~~~~~d~~al~vl~~iLg---~s~L~~~IRek-G~aYg~~~~~~~~~ 671 (674)
...... .+.....+.. + ..++.+++++..++. +..+..+++.+|| +||||++||++ ||+|+|++++....
T Consensus 734 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~v~~~lLg~~~ssrlf~~LRtk~qLgY~V~s~~~~~~ 809 (961)
T PRK15101 734 GKDVVV-DKKQSVNFEKAGSSTDSALAAVYVPTGY---DEYQSSAYSSLLGQIIQPWFYNQLRTEEQLGYAVFAFPMSVG 809 (961)
T ss_pred ccceEe-CCCCeEEEecCCCCCCCeEEEEEEeCCC---CCHHHHHHHHHHHHHHhHHHHHHHHHHhhhceEEEEEeeccC
Confidence 000001 1111111221 1 223344444422222 3478889999998 89999999996 99999999887554
Q ss_pred C
Q 005848 672 G 672 (674)
Q Consensus 672 G 672 (674)
|
T Consensus 810 ~ 810 (961)
T PRK15101 810 R 810 (961)
T ss_pred C
Confidence 4
No 6
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=100.00 E-value=4.9e-36 Score=295.99 Aligned_cols=247 Identities=34% Similarity=0.570 Sum_probs=212.0
Q ss_pred EecCcCchhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCCCChhhhccCCCCCCCCCCCCCCCCCccccccC
Q 005848 288 MQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDIN 367 (674)
Q Consensus 288 ~~~d~~~~~~~~~~~~~~l~~~~~~~s~eel~~~k~~~~~~~~~~~~~~~~e~l~~lp~l~~~di~~~~~~~~~~~~~~n 367 (674)
+.|+++..++..+.+++.|++++..+|++|++++.++.+.++++|.+++ ++++||+|+++||++....+|..+...+
T Consensus 1 m~P~~~~~~~~~~~e~~~L~~~k~~Ls~~e~~~i~~~~~~L~~~Q~~~d---~~~~LP~L~~~Di~~~~~~~~~~~~~~~ 77 (248)
T PF08367_consen 1 MKPDPGLSEKQEEEEKEKLAAYKASLSEEEKEKIIEQTKELKERQEAED---DLATLPTLSLSDIPREIEKIPLEVEKLG 77 (248)
T ss_dssp EEEETTHHHHHHHHHHHHHHHHHHCS-HHHHHHHHHHHHHHHHHHCS-----HHTTS----GGGS-SS------EECCCT
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhCChh---hHHHHccccHHhcCCCCCCCCceeeecC
Confidence 5799999999999999999999999999999999999999999999776 8999999999999999999998888889
Q ss_pred CceEEEeecCCCcEEEEEEEeeCCCCCcccccChHHHHHHhhhcCCCCCCHHHHHHHHhhcccceEEeeeecc-CCCCCC
Q 005848 368 GVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSS-IHGKED 446 (674)
Q Consensus 368 G~~v~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Gt~~~~~~el~~~i~~~~g~l~~~~~~~~-~~~~~~ 446 (674)
|++|++++.+||||+|+++.|+++.++.++.+++++|+.+|.+.||+++++.|++.+|..++||+++++.... ..+.+.
T Consensus 78 ~~~v~~~~~~TnGI~Y~~l~fdl~~l~~e~l~yl~Ll~~ll~~lgT~~~sy~el~~~i~~~tGGis~~~~~~~~~~~~~~ 157 (248)
T PF08367_consen 78 GIPVLFHEQPTNGIVYVRLYFDLSDLPEEDLPYLPLLTDLLGELGTKNYSYEELSNEIDLYTGGISFSIEVYTDYDDDDK 157 (248)
T ss_dssp TCEEEEEE---TTEEEEEEEEE-TTS-CCCHCCHHHHHHHCCCS-BSSS-HHHHHHHHHHHSSEEEEEEEEEEEECTECC
T ss_pred CccEEEEEcCCCCeEEEEEEecCCCCCHHHHHhHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCCeEEEeeeccCCCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997754 446678
Q ss_pred CeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhhhHHHHhc
Q 005848 447 PCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMG 526 (674)
Q Consensus 447 ~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 526 (674)
+..++.++++||.++++++++|+.+++++|.|++.+|++.++.+.++++++.+.++||.+|+.++.+.++..+.+.+.++
T Consensus 158 ~~~~l~is~k~L~~~~~~~~~ll~eil~~~~f~d~~rl~~ll~~~~s~~~~~i~~~Gh~~A~~ra~s~~s~~~~~~e~~~ 237 (248)
T PF08367_consen 158 YRPYLVISAKCLDEKLDEAFELLSEILTETDFDDKERLKELLKELKSDMESSIISSGHSYAMSRASSYLSRSGALDELWS 237 (248)
T ss_dssp CEEEEEEEEEEEGGGHHHHHHHHHHHHHCB-TT-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCCTT-HHHHHHHHHH
T ss_pred eeEEEEEEEEeHhhhHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcCCHHHHHHHHHc
Confidence 89999999999999999999999999999999998999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHH
Q 005848 527 GVSYLEFLQAL 537 (674)
Q Consensus 527 g~~~~~~l~~l 537 (674)
|++++.||++|
T Consensus 238 Gl~~~~fl~~L 248 (248)
T PF08367_consen 238 GLSQYKFLKDL 248 (248)
T ss_dssp SHHHHHHHHHH
T ss_pred CHHHHHHHHhC
Confidence 99999999864
No 7
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-30 Score=288.61 Aligned_cols=602 Identities=17% Similarity=0.161 Sum_probs=368.4
Q ss_pred CcEEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHH
Q 005848 9 NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYF 88 (674)
Q Consensus 9 ~~~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~ 88 (674)
...+++|+..||.+..|+|||+|||+|.||++||..+.+...|+.. |++-||+|..++|+|+|.. ..+.|+.+|+.++
T Consensus 53 al~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~-gGssNA~T~~e~T~y~F~V-~~~~l~~ALDrFa 130 (974)
T KOG0959|consen 53 ALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKN-GGSSNAYTDSEHTNYYFDV-QHDHLEGALDRFA 130 (974)
T ss_pred eeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhc-CCccccccccccceEEEec-chHHHHHHHHHHH
Confidence 5579999999999999999999999999999999999999999655 9999999999999999977 7788999999999
Q ss_pred hhhhCCCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCC
Q 005848 89 DAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKL 168 (674)
Q Consensus 89 d~~~~P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~i~~l 168 (674)
+.+.+|.|.++. .++| +..|..|.++..++-.++..+....+.-++|||++.++|+.+.|...
T Consensus 131 qFf~~Plf~~~a--~eRE---------------v~AVdSE~~~nl~~D~wr~~ql~~~l~~~~hp~~kF~tGN~~tL~~~ 193 (974)
T KOG0959|consen 131 QFFSDPLFNKSA--TERE---------------VGAVDSEHEKNLNSDGWRFDQLLRSLSNPGHPYSKFSTGNKKTLLEG 193 (974)
T ss_pred HHhhCcccChHH--HHHH---------------HHHHHHHHHhccCcchhHHHHHHHHhcCCCCcchhccccchhhhhhc
Confidence 999999999999 8877 89999999988877777777777777778999999999999999998
Q ss_pred C-----HHHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhhhcccccccccccccCCCCcc---hhHHHHHHhh------
Q 005848 169 T-----FEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFP---RGLSLMLRSM------ 234 (674)
Q Consensus 169 t-----~~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~~~~~~~~e~~~~~~~~~~~p---~~~~~~~~~~------ 234 (674)
. ++.|++||++||++++|+++++|+.+++.+..++. ..|+.++-..++ ...+| .+.......+
T Consensus 194 p~~~~~r~~L~kF~k~~Yssn~M~l~i~G~eslD~Le~lv~-~~F~~i~N~~~~--~p~f~~~p~~~e~~~~~~~v~pik 270 (974)
T KOG0959|consen 194 PREIDLRDELLKFYKNWYSSNIMTLVIVGKESLDVLESLVT-RLFDEISNKKKP--RPVFPEPPFLPEELKKLVRVVPIK 270 (974)
T ss_pred cccchHHHHHHHHHHhhcccccceEEEEcCCChhHHHHHHH-HHcccccccCCC--CCcccCCCCChHHhCcEEEEEecc
Confidence 8 99999999999999999999999999999999884 666554433221 11221 1111110000
Q ss_pred ------hhcccCCCccccccccchHHHHHHHHHccCCcchHHHHHHHhhc----------cCCC-eEEEEE-ecCcCch-
Q 005848 235 ------GKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYIL----------NNPH-CVTVEM-QPDPEKA- 295 (674)
Q Consensus 235 ------~~~~~~~~~~~~l~~~~~l~~l~~~l~~~~s~~~~~~l~~~~~~----------~~~~-~~~i~~-~~d~~~~- 295 (674)
-.|.- .|..........+.+...++-+..+.+...|.+.... ...+ .+.|++ ..+.+..
T Consensus 271 ~~~~l~is~~~--p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~gw~~sl~a~~~~~as~~~~f~v~idLtd~G~e~ 348 (974)
T KOG0959|consen 271 DGRSLMISWPV--PPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKRLGWATSLEAGIPEFASGYSFFNVSIDLTDEGLEH 348 (974)
T ss_pred ccceEEEEEec--CCcccccccCcHHHHHHHhccCCcchHHHHHHHhhchheeecCCCccccccceEEEEEEeccccchh
Confidence 01111 1111111123344455544433333355555444211 0111 223333 2444433
Q ss_pred -hhHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHhCCCCChhh-------hccCCCCC------------------
Q 005848 296 -SRDEAAEKEILAKV-KSSMTKEDLAELARATEELRLKQETPDPPEA-------LRSVPSLS------------------ 348 (674)
Q Consensus 296 -~~~~~~~~~~l~~~-~~~~s~eel~~~k~~~~~~~~~~~~~~~~e~-------l~~lp~l~------------------ 348 (674)
+.....+.+.|+.+ ..++-+--++.....-.....++.++.+.+. +..+|...
T Consensus 349 ~~~ii~~~f~yi~~l~~~~~~~~i~~E~~~~~~~~Frf~~k~~p~~~~~~~~~nlq~~P~~~il~~~~ll~~~~p~~i~~ 428 (974)
T KOG0959|consen 349 VDEIIGLVFNYIKLLQSAGPEKWIFKELQLISEVKFRFQDKEPPMEYASEIASNLQYYPVEDVLTGSYLLTEFDPDLIQE 428 (974)
T ss_pred HHHHHHHHHHHHHHHHhcCchhHHHHHHHHhhhhheeecccCCcHHHHHHHHhhcccCChHHhhcchhhhhhcChHHHHH
Confidence 66677888888877 4444433333333322333445555422222 11122110
Q ss_pred -----------------------------------CCCCCCCCCC-------------------CCc-------------
Q 005848 349 -----------------------------------LRDIPKEPIR-------------------VPT------------- 361 (674)
Q Consensus 349 -----------------------------------~~di~~~~~~-------------------~~~------------- 361 (674)
++||++.+.. +|+
T Consensus 429 ~~~~L~p~n~~v~~~s~~~~~~~d~~E~~ygt~y~~e~i~~~~~~~~~~~~~~~~l~lP~~nefI~t~f~~~~~~~~~~~ 508 (974)
T KOG0959|consen 429 VLSSLVPSNMRVILVSRSFEGKTDKAEPWYGTAYKVEDIPAEIIKEWENSHLNPELHLPTPNEFIPTDFSILPAPIPKLE 508 (974)
T ss_pred HHHhcCcccceeeeeeeccccccccccceeccccccccCCHHHHHHhhccCccccccCCCCCcccccccccccccCcccc
Confidence 0111110000 000
Q ss_pred ---cccccCCceEEEeecC--CCcEEEEEEEeeCC-CCCcccc-cChHHHHHHhhhcCCCCCCHHHHHHHHhhcccceEE
Q 005848 362 ---EVGDINGVKVLQHDLF--TNDVLYTEVVFDMS-SLKQELL-PLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISV 434 (674)
Q Consensus 362 ---~~~~~nG~~v~~~~~~--~~~~v~~~~~~~~g-~~~~~~~-~~~~~~~~~l~~~Gt~~~~~~el~~~i~~~~g~l~~ 434 (674)
-.......++++...+ ..|-.++.+.|..- ....... ....++..++. ..+. |..-.... +|+..
T Consensus 509 ~P~Li~~~~~~~lw~k~dd~f~~Pka~~~~~~~~p~~~~~~~~~~l~~l~~~~l~----d~l~--E~~Y~A~~--aGl~~ 580 (974)
T KOG0959|consen 509 YPVLISDTPFSELWYKQDDKFNVPKAYTKFDFICPGATQSPLNSVLSTLYVRLLK----DQLN--EYLYPALL--AGLTY 580 (974)
T ss_pred CCeeeecCCcceeEEecccccccchhheeeeecCcccccCHHHHHHHHHHHHHHH----HHHh--HHHHHHHh--ccceE
Confidence 0001123344444332 33444555555332 2221111 12233333332 2222 22222223 33444
Q ss_pred eeeeccCCCCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhhhhhccCcHHHHHHHHHhh
Q 005848 435 YPFTSSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAK 514 (674)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~ 514 (674)
+... ....+.+++++..+++.-+++.+.+++.+-..+ ++|+..+.+.....+.+...++|+..|.......
T Consensus 581 ~~~~--------s~~G~~~~v~Gfnekl~~ll~~~~~~~~~f~~~-~~rf~iike~~~~~~~n~~~~~p~~~a~~~~~ll 651 (974)
T KOG0959|consen 581 SLSS--------SSKGVELRVSGFNEKLPLLLEKVVQMMANFELD-EDRFEIIKELLKRELRNHAFDNPYQLANDYLLLL 651 (974)
T ss_pred Eeee--------cCCceEEEEeccCcccHHHHHHHHHHHHhcccc-HHHHHHHHHHHHHHHhhhhhccHHHHHHHHHHHH
Confidence 3332 125688999999999999999999988887755 6899999999999999988889988888776665
Q ss_pred cChhhhHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCC
Q 005848 515 LNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNS 594 (674)
Q Consensus 515 ~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~ 594 (674)
+-+.. |+-..-++.+.. ..++++..|-..+..+--+...|.||++ .+++..+++.....+....
T Consensus 652 l~~~~-----W~~~e~~~al~~----------~~le~~~~F~~~~~~~~~~e~~i~GN~t-e~~A~~l~~~v~d~l~~~~ 715 (974)
T KOG0959|consen 652 LEESI-----WSKEELLEALDD----------VTLEDLESFISEFLQPFHLELLIHGNLT-EKEALQLLKSVLDILKSAA 715 (974)
T ss_pred hhccc-----cchHHHHHHhhc----------ccHHHHHHHHHHHhhhhheEEEEecCcc-hHHHHHHHHHHHhhhhccC
Confidence 54432 222222222221 2368888888888888889999999997 5778887777766662211
Q ss_pred Cc-ccc----cc---cccCCCCcEEE-EcC---cCee-EEEEecccCCCCCCcchHHHHHHHHhcCccchHHHh--hc-C
Q 005848 595 PV-ERV----KW---KAHLPSANEAI-VIP---TQVN-YVGKAANIFETGYKLNGSAYVISKHISNVWLWDRVR--VS-G 658 (674)
Q Consensus 595 ~~-~~~----~~---~~~~~~~~~~~-~~~---~~~~-~v~~~~~~~~~~~~d~~al~vl~~iLg~s~L~~~IR--ek-G 658 (674)
+. .+. .. ....+.+...+ ..+ ...+ .+..-..+-..+..+...+.++.+++. ..+|..+| |+ |
T Consensus 716 ~~~~p~~~~~~~~~~~~~lp~G~~~~~~~~~n~~~~ns~i~~~~Q~~~~~~~~~~~~~L~~~li~-ep~Fd~LRTkeqLG 794 (974)
T KOG0959|consen 716 PNSRPLFRSEHLPRREIQLPNGDYYFYRHLLNKTDDNSCIEVYYQIGVQDTRDNAVLGLLEQLIK-EPAFDQLRTKEQLG 794 (974)
T ss_pred CCCccccccccCcccceeccCCceEEEEcccccCCCCceEEEEEEcccchhHHHHHHHHHHHHhc-cchHHhhhhHHhhC
Confidence 11 010 00 01111222222 212 1111 121222222234466778888888886 68899999 56 8
Q ss_pred CCCCcccccC
Q 005848 659 GAYGGFCDFD 668 (674)
Q Consensus 659 ~aYg~~~~~~ 668 (674)
+.++.+++..
T Consensus 795 Yiv~~~~r~~ 804 (974)
T KOG0959|consen 795 YIVSTGVRLN 804 (974)
T ss_pred eEeeeeeeee
Confidence 8777776664
No 8
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=5.2e-33 Score=300.88 Aligned_cols=308 Identities=23% Similarity=0.290 Sum_probs=225.7
Q ss_pred CcEEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHH
Q 005848 9 NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYF 88 (674)
Q Consensus 9 ~~~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~ 88 (674)
..+|++|++.|+.++.|+|||||||+|+||++++..+ +.+.+ +..|+..||+|+.|+|.|.+. +.+++++.+++++.
T Consensus 42 ~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~-i~~~~-~~~G~~~na~ts~d~t~y~~~-~l~~~~~~~l~lla 118 (438)
T COG0612 42 DVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAE-LAEAF-EKLGGQLNAFTSFDYTVYYLS-VLPDNLDKALDLLA 118 (438)
T ss_pred EEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHH-HHHHH-HHhcCeeeccccchhhhhhhh-hchhhhHHHHHHHH
Confidence 3578899999999999999999999999999998877 45555 566999999999999999986 68899999999999
Q ss_pred hhhhCCCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCC
Q 005848 89 DAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKL 168 (674)
Q Consensus 89 d~~~~P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~i~~l 168 (674)
|++++|.|++++ |++| |+++++|++...++|..++.+.+.+.+|++|||+++++|++++|+++
T Consensus 119 d~l~~p~f~~~~--~e~E---------------k~vil~ei~~~~d~p~~~~~~~l~~~~~~~~p~~~~~~G~~e~I~~i 181 (438)
T COG0612 119 DILLNPTFDEEE--VERE---------------KGVILEEIRMRQDDPDDLAFERLLEALYGNHPLGRPILGTEESIEAI 181 (438)
T ss_pred HHHhCCCCCHHH--HHHH---------------HHHHHHHHHhhccCchHHHHHHHHHHhhccCCCCCCCCCCHHHHHhC
Confidence 999999999999 9887 99999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhhhcccccccc-cccccCCC--C-c---------chhHHHHHHhhh
Q 005848 169 TFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEF-SLRENNTG--S-F---------PRGLSLMLRSMG 235 (674)
Q Consensus 169 t~~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~~~~~~~~e~-~~~~~~~~--~-~---------p~~~~~~~~~~~ 235 (674)
|.++|++||++||+|+||+|+++||||++++.++++ ..|+..+. ........ . . |....+....+.
T Consensus 182 t~~dl~~f~~k~Y~p~n~~l~vvGdi~~~~v~~~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (438)
T COG0612 182 TREDLKDFYQKWYQPDNMVLVVVGDVDAEEVVELIE-KYFGDLPGAAPPPKIPPEPPLGPERVVRVNDPEQPDLEQAWLA 260 (438)
T ss_pred CHHHHHHHHHHhcCcCceEEEEecCCCHHHHHHHHH-HHHccCCccCCCCCCCCccccCCCceEEecCCCCchhhhhhhh
Confidence 999999999999999999999999999999999996 66655542 11000000 0 0 000001111111
Q ss_pred hcccCCCccccccccchHHHHHHHHHccCCcchHHHHHHHhhc-----------cCCCeEEEEEecCcCchhhHHHHHHH
Q 005848 236 KWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYIL-----------NNPHCVTVEMQPDPEKASRDEAAEKE 304 (674)
Q Consensus 236 ~~~~~~~~~~~l~~~~~l~~l~~~l~~~~s~~~~~~l~~~~~~-----------~~~~~~~i~~~~d~~~~~~~~~~~~~ 304 (674)
.+....+.. .......+..+...+++..++++|..++++.-. .....+.+...+++...+...+.+.+
T Consensus 261 ~g~~~~~~~-~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 339 (438)
T COG0612 261 LGYPGPDYD-SPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDFLSDSGLFSIYAGTAPENPEKTAELVEE 339 (438)
T ss_pred ccccCcCcC-cchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeeccccccccccCCceEEEEecCCChhhHHHHHHH
Confidence 111111111 001123344344445544556788877776211 11123445556666666667777777
Q ss_pred HHHHHHhc----CCHHHHHHHHHHHHHHHHHhCCCCChhh
Q 005848 305 ILAKVKSS----MTKEDLAELARATEELRLKQETPDPPEA 340 (674)
Q Consensus 305 ~l~~~~~~----~s~eel~~~k~~~~~~~~~~~~~~~~e~ 340 (674)
+++++... ++++++++.|+.... ..-...++++.
T Consensus 340 ~~~~~~~~~~~~~t~~~~~~~k~~~~~--~~~~~~~s~~~ 377 (438)
T COG0612 340 ILKALKKGLKGPFTEEELDAAKQLLIG--LLLLSLDSPSS 377 (438)
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHH--HhhhccCCHHH
Confidence 77776333 899999999985443 33333345433
No 9
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=6.2e-33 Score=305.15 Aligned_cols=292 Identities=17% Similarity=0.193 Sum_probs=224.5
Q ss_pred cEEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHHh
Q 005848 10 KVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYFD 89 (674)
Q Consensus 10 ~~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~d 89 (674)
.+|++|+++|+.+..|+|||+|||+|+||++++..+-+.+.+ +.+|+.+||+|+.|+|.|++ .++.++++.+|+++.|
T Consensus 26 l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~l-e~lGG~lNA~Ts~d~T~y~~-~v~~~~l~~aL~lLaD 103 (696)
T TIGR02110 26 LRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWV-QRQGGQVNATTLERTTAFFF-ELPAAALAAGLARLCD 103 (696)
T ss_pred EEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHH-HHhCCeEEEEEcCCeEEEEE-EecHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999864366777 55699999999999999997 5688999999999999
Q ss_pred hhhCCCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCCC
Q 005848 90 AVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLT 169 (674)
Q Consensus 90 ~~~~P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~i~~lt 169 (674)
++++|.|++++ |++| |++|++|++...++|..++.+.+.+.+|++|||+++.+|+.++|++++
T Consensus 104 ~l~~P~f~eee--ierE---------------r~vvl~Ei~~~~ddp~~~~~~~l~~~l~~~HPy~~~~iGt~esL~~it 166 (696)
T TIGR02110 104 MLARPLLTAED--QQRE---------------REVLEAEYIAWQNDADTLREAALLDALQAGHPLRRFHAGSRDSLALPN 166 (696)
T ss_pred HHhCCCCCHHH--HHHH---------------HHHHHHHHHHHhcCHHHHHHHHHHHHcCCCCCCCCCCCCCHHHHhCcc
Confidence 99999999999 9887 999999999989999999999999999999999999999999999876
Q ss_pred ---HHHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhhhcccccccccccccCCCCcc--h-h-HHH----HHHhhhhcc
Q 005848 170 ---FEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFP--R-G-LSL----MLRSMGKWI 238 (674)
Q Consensus 170 ---~~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~~~~~~~~e~~~~~~~~~~~p--~-~-~~~----~~~~~~~~~ 238 (674)
.+++++||++||+|+||+|+|+||++++++.++++ ..++.++...........| . + ..+ .-...-.|.
T Consensus 167 ~~t~edL~~F~~~~Y~p~NmvLvIvGdvs~eel~~l~e-~~f~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~q~~l~~~ 245 (696)
T TIGR02110 167 TAFQQALRDFHRRHYQAGNMQLWLQGPQSLDELEQLAA-RFGASLAAGGECAQAPPAPLLRFDRLTLAGGSEPRLWLLFA 245 (696)
T ss_pred cchHHHHHHHHHHhcchhcEEEEEEeCCCHHHHHHHHH-HHhCCCCCCCCCCCCCCCCCCCCceeEEEecCcceEEEEEe
Confidence 99999999999999999999999999999999995 6555443211100000000 0 0 000 000000110
Q ss_pred cCCCccccccccchHHHHHHHHHccCCcchHHHHHHHhhc-----------cCCCeEEEEEec---CcCchhhHHHHHHH
Q 005848 239 YDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYIL-----------NNPHCVTVEMQP---DPEKASRDEAAEKE 304 (674)
Q Consensus 239 ~~~~~~~~l~~~~~l~~l~~~l~~~~s~~~~~~l~~~~~~-----------~~~~~~~i~~~~---d~~~~~~~~~~~~~ 304 (674)
....+. .....+..+...|+++.++++|..++++.+. .+...+.|.+.+ .++..++..+.+.+
T Consensus 246 ~p~~~~---~d~~al~lL~~iLg~g~sSrL~~~LRe~GLaysV~s~~~~~~~g~~lf~I~~~lt~~~~~~~~~v~~~i~~ 322 (696)
T TIGR02110 246 LAGLPA---TARDNVTLLCEFLQDEAPGGLLAQLRERGLAESVAATWLYQDAGQALLALEFSARCISAAAAQQIEQLLTQ 322 (696)
T ss_pred ecCCCC---CChHHHHHHHHHhCCCcchHHHHHHHHCCCEEEEEEeccccCCCCcEEEEEEEEcCCCccCHHHHHHHHHH
Confidence 110000 1122467788888877777789888875332 122244555554 24467778888999
Q ss_pred HHHHH-Hh--cCCHHHHHHHHHH
Q 005848 305 ILAKV-KS--SMTKEDLAELARA 324 (674)
Q Consensus 305 ~l~~~-~~--~~s~eel~~~k~~ 324 (674)
+|+++ ++ +++.+|++++|+.
T Consensus 323 ~L~~L~~~~~~~~~eel~rlk~~ 345 (696)
T TIGR02110 323 WLGALAEQTWAEQLEHYAQLAQR 345 (696)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHh
Confidence 99998 77 7999999999984
No 10
>TIGR02110 PQQ_syn_pqqF coenzyme PQQ biosynthesis probable peptidase PqqF. In a subset of species that make coenzyme PQQ (pyrrolo-quinoline-quinone), this probable peptidase is found in the PQQ biosynthesis region and is thought to act as a protease on PqqA (TIGR02107), a probable peptide precursor of the coenzyme. PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=100.00 E-value=1.9e-32 Score=301.30 Aligned_cols=279 Identities=11% Similarity=0.037 Sum_probs=218.8
Q ss_pred cccCCceEEEeecCCCcEEEEEEEeeCCCCCc-ccccChHHHHHHhhhcCCCCCCHH-HHHHHHhhcccceEEeeeeccC
Q 005848 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPLFCQSLKEMGTKDLSFV-QLDQLIGRKTGGISVYPFTSSI 441 (674)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~Gt~~~~~~-el~~~i~~~~g~l~~~~~~~~~ 441 (674)
++.||++|++.+.++.++|++.++|++|+..| +...++++|+++|+++||++++.. +|++.++.+||.+|++++.
T Consensus 4 tL~NGLrVllv~~p~~p~vav~l~v~aGS~~Ep~~~~GLAHfLEHMLFkGT~~~~~~~~i~~~le~lGG~lNA~Ts~--- 80 (696)
T TIGR02110 4 TLPNGLRVHLYHQPDAKRAAALLRVAAGSHDEPSAWPGLAHFLEHLLFLGGERFQGDDRLMPWVQRQGGQVNATTLE--- 80 (696)
T ss_pred EcCCCCEEEEEECCCCCEEEEEEEEeeccCCCCCCCCcHHHHHHHHHhcCCCCCCcHHHHHHHHHHhCCeEEEEEcC---
Confidence 46799999999999999999999999999877 567888888888888999999985 8999999999999999976
Q ss_pred CCCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchH--HHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhh
Q 005848 442 HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQ--RFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAG 519 (674)
Q Consensus 442 ~~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~--~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 519 (674)
|+++|++++++++++.+|++++|++.+|.|++++ +++.++.+++... . +++...+...+...++++|
T Consensus 81 -------d~T~y~~~v~~~~l~~aL~lLaD~l~~P~f~eeeierEr~vvl~Ei~~~---~-ddp~~~~~~~l~~~l~~~H 149 (696)
T TIGR02110 81 -------RTTAFFFELPAAALAAGLARLCDMLARPLLTAEDQQREREVLEAEYIAW---Q-NDADTLREAALLDALQAGH 149 (696)
T ss_pred -------CeEEEEEEecHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH---h-cCHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999999999999999532 4444444444333 3 3445778888888889999
Q ss_pred hHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCcccc
Q 005848 520 WISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERV 599 (674)
Q Consensus 520 ~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~~~ 599 (674)
||++...| +.+.|..+. ..+.++|++||+++|.|+||+|+|+||++ .++++++++++|+.|+.+......
T Consensus 150 Py~~~~iG--t~esL~~it-------~~t~edL~~F~~~~Y~p~NmvLvIvGdvs-~eel~~l~e~~f~~~~~~~~~~~~ 219 (696)
T TIGR02110 150 PLRRFHAG--SRDSLALPN-------TAFQQALRDFHRRHYQAGNMQLWLQGPQS-LDELEQLAARFGASLAAGGECAQA 219 (696)
T ss_pred CCCCCCCC--CHHHHhCcc-------cchHHHHHHHHHHhcchhcEEEEEEeCCC-HHHHHHHHHHHhCCCCCCCCCCCC
Confidence 98765444 455555432 12368999999999999999999999997 789999999999999865432111
Q ss_pred cccccCCCC-cEEEEcCcCeeEEEEecccCCCCCCcchHHHHHHHHhc---CccchHHHhhcCCCCCcccccC
Q 005848 600 KWKAHLPSA-NEAIVIPTQVNYVGKAANIFETGYKLNGSAYVISKHIS---NVWLWDRVRVSGGAYGGFCDFD 668 (674)
Q Consensus 600 ~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~d~~al~vl~~iLg---~s~L~~~IRekG~aYg~~~~~~ 668 (674)
..++..... ......+.++.++++++++.+..+++ ++.++++||| +|+|+.+|||+|+||++++++.
T Consensus 220 ~~~p~~~~~~~~~~~~~~~q~~l~~~~p~~~~~d~~--al~lL~~iLg~g~sSrL~~~LRe~GLaysV~s~~~ 290 (696)
T TIGR02110 220 PPAPLLRFDRLTLAGGSEPRLWLLFALAGLPATARD--NVTLLCEFLQDEAPGGLLAQLRERGLAESVAATWL 290 (696)
T ss_pred CCCCCCCCceeEEEecCcceEEEEEeecCCCCCChH--HHHHHHHHhCCCcchHHHHHHHHCCCEEEEEEecc
Confidence 111111112 12222344566788888877776655 5889999998 7899999999999999988654
No 11
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.1e-30 Score=277.44 Aligned_cols=602 Identities=17% Similarity=0.198 Sum_probs=379.4
Q ss_pred CcEEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHH
Q 005848 9 NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYF 88 (674)
Q Consensus 9 ~~~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~ 88 (674)
-.++++|+..+|.+..|+||++|||+|.||++||..+-|..+|+.. ||+-||+|..++|+|+|.. ..+.|+.+++.++
T Consensus 49 AL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskh-gGs~NA~T~~~~T~fyFeV-~~~al~~ALDrFa 126 (937)
T COG1025 49 ALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKH-GGSHNASTAGERTAFYFEV-ENDALEGALDRFA 126 (937)
T ss_pred eEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHc-CCccccccCCCceeEEEEe-cHHHHHHHHHHHH
Confidence 4589999999999999999999999999999999999899999665 8899999999999999854 6689999999999
Q ss_pred hhhhCCCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCC-
Q 005848 89 DAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPK- 167 (674)
Q Consensus 89 d~~~~P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~i~~- 167 (674)
+++-.|.|+++. .++| +..|-+|.....++-..++.+.....+-++||+++.++|+.+++..
T Consensus 127 ~ff~~PLf~~e~--~dRE---------------~~AV~sE~~~~~~~D~~R~~~~~~~~~np~HP~srFs~GN~~TL~~~ 189 (937)
T COG1025 127 DFFIEPLFNKEA--LDRE---------------RNAVNSEFTMNLTSDGWRMYQVQALTANPGHPLSKFSTGNLETLSDK 189 (937)
T ss_pred HHHhccccChHH--HHHH---------------HHHHHHHHhcCcCchHHHHHHHHHhhcCCCCCccccCCCChhhhccC
Confidence 999999999998 7777 8999999998888888899988888888999999999999999877
Q ss_pred ---CCHHHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhhhcccccccccccccCCCCcchhHHHHHHhhhhccc--CCC
Q 005848 168 ---LTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIY--DMN 242 (674)
Q Consensus 168 ---lt~~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~~~~~~~~e~~~~~~~~~~~p~~~~~~~~~~~~~~~--~~~ 242 (674)
-..+++++||++||+++||+++++|+-+++++.+++. ..|+.++.+.+..+....|.-...-.. .|.+ ..-
T Consensus 190 p~~~v~~el~ef~~~~YSa~~M~lviyg~q~ldeL~~~a~-~~F~~Ipn~~~~~p~~p~p~~~d~~t~---~ii~i~p~~ 265 (937)
T COG1025 190 PGLVVQQELKEFHEKHYSANNMKLVIYGNQPLDELAKLAA-DLFGDIPNRARKIPPIPVPVVTDEQTG---KIIHIVPAK 265 (937)
T ss_pred CCchHHHHHHHHHHHhcChhheEEEEecCCCHHHHHHHHH-HHhCcCCCCCCCCCCCCCCCCChHHhC---ceEEeccCC
Confidence 6789999999999999999999999999999999994 888877765543222222211110000 0000 000
Q ss_pred cccccc-----------c-cchHHHHHHHHHccCCcchHHHHHHHhhc----------c-CCCeEEEEEe-cCcC--chh
Q 005848 243 PFEPLK-----------Y-EKPLMALKARLAEEGSKAVFSPLIEKYIL----------N-NPHCVTVEMQ-PDPE--KAS 296 (674)
Q Consensus 243 ~~~~l~-----------~-~~~l~~l~~~l~~~~s~~~~~~l~~~~~~----------~-~~~~~~i~~~-~d~~--~~~ 296 (674)
|...|. + ....+.+...|+...++++..-|-++.+. . |..-+.|++. .+.+ ..+
T Consensus 266 ~~~~L~i~f~i~~~~~~~~~~~~~~~s~Lig~es~gsL~~~Lk~~Glit~l~a~~~~~~~n~~~f~is~~LT~~Gl~~~~ 345 (937)
T COG1025 266 PRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLKKQGLITELSAGLDPISGNYGVFAISYELTDKGLAHYD 345 (937)
T ss_pred CCceEEEEEEcCCcccccccCCHHHHHHHhccCCCchHHHHHHhccchhhhccccccccCCcceEEEEeehhhcchhhHH
Confidence 100110 1 23445566666654444343333333222 1 1111334432 2322 344
Q ss_pred hHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHHHhCCCCChhhhcc-------------------CCC----------
Q 005848 297 RDEAAEKEILAKV-KSSMTKEDLAELARATEELRLKQETPDPPEALRS-------------------VPS---------- 346 (674)
Q Consensus 297 ~~~~~~~~~l~~~-~~~~s~eel~~~k~~~~~~~~~~~~~~~~e~l~~-------------------lp~---------- 346 (674)
...+.+.+.++-+ .+++-.-.++++..-......+.++..+-..+.. +|.
T Consensus 346 ~VI~~~F~yl~~l~~~~~~~~~f~Elq~v~~l~f~y~~~t~~~~~~~~l~~~m~~~p~~~~~~~~~~~~~yd~~~~~~~l 425 (937)
T COG1025 346 RVIALTFQYLNLLREKGIPKYTFDELQNVLDLDFRYPSKTRPMDYVSWLADNMEREPVEHTLYASLVLPRYDPKAIQERL 425 (937)
T ss_pred HHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccccCChHHHHHHHHHhcccCChhhhhchhhcccccCHHHHHHHH
Confidence 4567888888887 7888877777766644444444433222111100 000
Q ss_pred -----------------------------CCCCCCCCCC-------------------CCCCccc---------------
Q 005848 347 -----------------------------LSLRDIPKEP-------------------IRVPTEV--------------- 363 (674)
Q Consensus 347 -----------------------------l~~~di~~~~-------------------~~~~~~~--------------- 363 (674)
..++|+..+. +-+|.+.
T Consensus 426 ~~~~pen~R~~lis~~~~~~~~a~~~~~py~v~~~~~~~~~~~~~~~~~~~l~lP~~N~fIp~~~~~~~~~~~~~~p~ll 505 (937)
T COG1025 426 ALMTPENARLWLISKLEEHDKAAYFYGFPYQVDDYTAQPLDAWQQKADSIELSLPEPNPFIPDDVSLIKSEKKFTFPQLL 505 (937)
T ss_pred HhhCccceEEEEecCCCCccccceeecCcceecchhhhhhhhhhcccccccccCCCCCCCCCccccccccccCCCCchhh
Confidence 0001110000 0001000
Q ss_pred cccCCceEEEeec--C-CCcEEEEEEEeeCCCC-Ccccc-cChHHHHHHhhhcCCCCCCHHHHHHHHhhcccceEEeeee
Q 005848 364 GDINGVKVLQHDL--F-TNDVLYTEVVFDMSSL-KQELL-PLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFT 438 (674)
Q Consensus 364 ~~~nG~~v~~~~~--~-~~~~v~~~~~~~~g~~-~~~~~-~~~~~~~~~l~~~Gt~~~~~~el~~~i~~~~g~l~~~~~~ 438 (674)
....|.++++... . +.|-.++.+.|+.-.. +.... -...+++. +.+.-..++++ +..-||+++++..
T Consensus 506 ~~~~~~~~wy~~~d~F~~~PK~~v~~~irsp~~~~s~r~~Vl~~l~~~-la~dal~~~~y-------~A~~aG~sfs~~~ 577 (937)
T COG1025 506 SEDPNLRLWYLKEDYFAVEPKASVSLAIRSPHASRSPRNQVLTELYAY-LANDALDKLSY-------QASLAGLSFSLAA 577 (937)
T ss_pred hcCCCceEEEecCCccccCCcceeEEEEeCcccccCHHHHHHHHHHHH-HHHHHHHhhhh-------HHHhcceEEEeec
Confidence 1233566666432 2 3356666677754332 22221 22333343 33323334443 2334556665543
Q ss_pred ccCCCCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChh
Q 005848 439 SSIHGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTA 518 (674)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 518 (674)
....+.+++++.++.++..+.-+-+.+..-.++ ++++..+..+..+.+++...+.+...+...+....-+.
T Consensus 578 --------~~~Gl~ltisGft~~lp~L~~~~l~~l~~~~~~-~~~f~~~K~~~~~~~~~a~~~~p~~~~~~~l~~l~~~~ 648 (937)
T COG1025 578 --------NSNGLDLTISGFTQRLPQLLRAFLDGLFSLPVD-EDRFEQAKSQLSEELKNALTGKPYRQALDGLTGLLQVP 648 (937)
T ss_pred --------CCCceEEEeeccccchHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHHHHhhhhcCCHHHHHHHhhhhhCCC
Confidence 126789999999999999999999999888777 68999999999999999998888888877777666543
Q ss_pred hhHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCc--
Q 005848 519 GWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPV-- 596 (674)
Q Consensus 519 ~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~-- 596 (674)
++ ...+.++.+. +...+++.+|...++++..+.+.|.|+.. .+++.++.+.....++.....
T Consensus 649 ~~--------s~~e~~~~l~-------~v~~~e~~~f~~~l~~~~~lE~lv~Gn~~-~~da~~l~~~~~~~l~~~~s~~~ 712 (937)
T COG1025 649 YW--------SREERRNALE-------SVSVEEFAAFRDTLLNGVHLEMLVLGNLT-EADATNLAETLQKKLPAIGSTWY 712 (937)
T ss_pred Cc--------CHHHHHHHhh-------hccHHHHHHHHHHhhhccceeeeeeccch-HHHHHHHHHHHHhhhcccCCccc
Confidence 32 1122222221 11257888899999999999999999997 677877777665555432210
Q ss_pred ccccccccCCCCcEEEEc--CcCeeEEEEecccCCCCC-CcchHHHHHHHHhcCccchHHHhhc-CCCCCcccccC
Q 005848 597 ERVKWKAHLPSANEAIVI--PTQVNYVGKAANIFETGY-KLNGSAYVISKHISNVWLWDRVRVS-GGAYGGFCDFD 668 (674)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~-~d~~al~vl~~iLg~s~L~~~IRek-G~aYg~~~~~~ 668 (674)
.....-.. ..+...+.. +.+.+-.+.-.....+++ ++.....++.+++. ..+|.+||-| -+-|-|++.+.
T Consensus 713 ~~~~~~~~-~~~~~~~e~~~~~~~~an~~i~~~~~~~~~~~~a~s~Ll~~l~~-~~ff~~LRTkeQLGY~Vfs~~~ 786 (937)
T COG1025 713 RNPSVYLL-KGGTRIFETVGGESDSANAAILYPQQYDEIKSSALSSLLGQLIH-PWFFDQLRTKEQLGYAVFSGPR 786 (937)
T ss_pred CCCceecc-CCCeeEeeeccCCcccccceeEeccccchHHHHHHHHHHHHHHh-HHhHHHhhhhhhcceEEEecce
Confidence 00111111 111111111 122221111111222332 23333345566664 6889999975 77776666654
No 12
>COG0612 PqqL Predicted Zn-dependent peptidases [General function prediction only]
Probab=100.00 E-value=3e-32 Score=294.92 Aligned_cols=282 Identities=14% Similarity=0.171 Sum_probs=228.1
Q ss_pred cccCCceEEEeecCCCcEEEEEEEeeCCCCCc-ccccChHHHHHHhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccCC
Q 005848 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIH 442 (674)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~Gt~~~~~~el~~~i~~~~g~l~~~~~~~~~~ 442 (674)
.+.||++++..+.++.+.|.++++|++|+..+ ....++++|.++|+++||++++..+|.+.++..||.+|++++.
T Consensus 21 ~L~nGl~~~~~~~~~~~~vs~~~~v~~Gs~~e~~~~~G~AH~lehm~fkgt~~~~~~~i~~~~~~~G~~~na~ts~---- 96 (438)
T COG0612 21 TLPNGLRVITYPNPTAPTVSLDVWVKAGSRAEPAGKAGIAHFLEHMAFKGTTGLPSAELAEAFEKLGGQLNAFTSF---- 96 (438)
T ss_pred EcCCCCEEEEEeCCCCCEEEEEEEEeecccCCCCCcccHHHHHHHHHccCCCCCChHHHHHHHHHhcCeeeccccc----
Confidence 57899999999999999999999999999876 4556777777777778999999999999999999999999986
Q ss_pred CCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCch--HHHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhhh
Q 005848 443 GKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQ--QRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGW 520 (674)
Q Consensus 443 ~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~--~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 520 (674)
+++.++++++++++++++++++|++.+|.|+++ +++|.++.+.+.+..+ ++..++...+...++++||
T Consensus 97 ------d~t~y~~~~l~~~~~~~l~llad~l~~p~f~~~~~e~Ek~vil~ei~~~~d----~p~~~~~~~l~~~~~~~~p 166 (438)
T COG0612 97 ------DYTVYYLSVLPDNLDKALDLLADILLNPTFDEEEVEREKGVILEEIRMRQD----DPDDLAFERLLEALYGNHP 166 (438)
T ss_pred ------hhhhhhhhhchhhhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcc----CchHHHHHHHHHHhhccCC
Confidence 899999999999999999999999999999954 3666777777666653 4558999999999999999
Q ss_pred HHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCccccc
Q 005848 521 ISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVK 600 (674)
Q Consensus 521 ~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~~~~ 600 (674)
|++...| +.+.+..++ +++|++||+++|+|+||+|+|+||++ .+++...++++|++|+...++...
T Consensus 167 ~~~~~~G--~~e~I~~it----------~~dl~~f~~k~Y~p~n~~l~vvGdi~-~~~v~~~~~~~f~~~~~~~~~~~~- 232 (438)
T COG0612 167 LGRPILG--TEESIEAIT----------REDLKDFYQKWYQPDNMVLVVVGDVD-AEEVVELIEKYFGDLPGAAPPPKI- 232 (438)
T ss_pred CCCCCCC--CHHHHHhCC----------HHHHHHHHHHhcCcCceEEEEecCCC-HHHHHHHHHHHHccCCccCCCCCC-
Confidence 9887766 456666664 48999999999999999999999998 579999999999999862221111
Q ss_pred ccccCCCCcEEEEc------CcCeeEEEEecccCCCCCC-cchHHHHHHHHhc---CccchHHHhhc-CCCCCccc--cc
Q 005848 601 WKAHLPSANEAIVI------PTQVNYVGKAANIFETGYK-LNGSAYVISKHIS---NVWLWDRVRVS-GGAYGGFC--DF 667 (674)
Q Consensus 601 ~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~-d~~al~vl~~iLg---~s~L~~~IRek-G~aYg~~~--~~ 667 (674)
...+.......+.+ ...+.++..|.+.++..++ +++++.|++.+|| +||||++|||+ |+||++++ .+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~llgg~~~SrLf~~~re~~glay~~~~~~~~ 312 (438)
T COG0612 233 PPEPPLGPERVVRVNDPEQPDLEQAWLALGYPGPDYDSPDDYAALLLLNGLLGGGFSSRLFQELREKRGLAYSVSSFSDF 312 (438)
T ss_pred CCccccCCCceEEecCCCCchhhhhhhhccccCcCcCcchhhHHHHHHHHHhCCCcchHHHHHHHHhcCceeeecccccc
Confidence 11111122222222 2335578889898888877 8999999999998 69999999997 99999885 44
Q ss_pred CCCCCC
Q 005848 668 DSHSGV 673 (674)
Q Consensus 668 ~~~~G~ 673 (674)
..+.|.
T Consensus 313 ~~~~~~ 318 (438)
T COG0612 313 LSDSGL 318 (438)
T ss_pred ccccCC
Confidence 344444
No 13
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-31 Score=259.23 Aligned_cols=292 Identities=15% Similarity=0.183 Sum_probs=216.3
Q ss_pred CcEEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHH
Q 005848 9 NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYF 88 (674)
Q Consensus 9 ~~~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~ 88 (674)
-++|++|+++|++.+.|+|||||||.|+||++.+...+-.+. +..|+++||+|++|+|.|+ ..+.+++++++++++.
T Consensus 58 GVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEi--eniGahLNAytSReqT~yy-akal~~dv~kavdiLa 134 (467)
T KOG0960|consen 58 GVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEI--ENIGAHLNAYTSREQTVYY-AKALSKDVPKAVDILA 134 (467)
T ss_pred EEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHH--HHHHHHhcccccccceeee-hhhccccchHHHHHHH
Confidence 458999999999999999999999999999999887743344 7789999999999999999 4678899999999999
Q ss_pred hhhhCCCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCC
Q 005848 89 DAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKL 168 (674)
Q Consensus 89 d~~~~P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~i~~l 168 (674)
|++++..+.+.. +++| |++++.||+..+.+-..++++.++.+.|+++|.++.+.|..+.|++|
T Consensus 135 DIlqns~L~~s~--IerE---------------R~vILrEmqevd~~~~eVVfdhLHatafQgtPL~~tilGp~enI~si 197 (467)
T KOG0960|consen 135 DILQNSKLEESA--IERE---------------RDVILREMQEVDKNHQEVVFDHLHATAFQGTPLGRTILGPSENIKSI 197 (467)
T ss_pred HHHHhCccchhH--HHHH---------------HHHHHHHHHHHHhhhhHHHHHHHHHHHhcCCcccccccChhhhhhhh
Confidence 999999999998 8887 99999999998888899999999999999999999999999999999
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhhhcccccccccccccCCCC-----------------cc-------
Q 005848 169 TFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSLRENNTGS-----------------FP------- 224 (674)
Q Consensus 169 t~~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~~~~~~~~e~~~~~~~~~~-----------------~p------- 224 (674)
+.+||++|-++||.+++|++..+|.|+++++.++++ ..|+.++.......... .|
T Consensus 198 ~r~DL~~yi~thY~~~RmVlaaaGgV~He~lv~la~-k~fg~~~~~~~~~~~~~~~~~~FtgsEvR~rdd~lP~a~~AiA 276 (467)
T KOG0960|consen 198 SRADLKDYINTHYKASRMVLAAAGGVKHEELVKLAE-KYFGDLSKLQTGDKVPLVPPARFTGSEVRVRDDDLPLAHIAIA 276 (467)
T ss_pred hHHHHHHHHHhcccCccEEEEecCCcCHHHHHHHHH-HHcCCCcccccCcCCCCCCCccccCceeeecCCCCchhheeee
Confidence 999999999999999999999999999999999995 77776442211110000 01
Q ss_pred ---------hhH--HHHHHhhhhcccCCCccccccccchHHHHHHHHHccCCcchHHHHHHHhhccCCCeEEEEEec-Cc
Q 005848 225 ---------RGL--SLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQP-DP 292 (674)
Q Consensus 225 ---------~~~--~~~~~~~~~~~~~~~~~~~l~~~~~l~~l~~~l~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~-d~ 292 (674)
..+ ......+..|..... ... ... ..|.+.+.+.....-|+.+--.|-..+.+ -+.+.| ++
T Consensus 277 VEG~~w~~pD~~~l~van~iiG~wdr~~g-~g~---~~~-s~La~~~~~~~l~~sfqsFnt~YkDTGLw--G~y~V~~~~ 349 (467)
T KOG0960|consen 277 VEGVSWAHPDYFALMVANTIIGNWDRTEG-GGR---NLS-SRLAQKIQQDQLCHSFQSFNTSYKDTGLW--GIYFVTDNL 349 (467)
T ss_pred EecCCcCCccHHHHHHHHHHhhhhhcccC-Ccc---CCc-cHHHHHHHHHHHHHHHhhhhcccccccce--eEEEEecCh
Confidence 011 111222233321000 000 000 11222222111010111111111112333 355556 77
Q ss_pred CchhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q 005848 293 EKASRDEAAEKEILAKVKSSMTKEDLAELARATEEL 328 (674)
Q Consensus 293 ~~~~~~~~~~~~~l~~~~~~~s~eel~~~k~~~~~~ 328 (674)
...+.+...+.++...+...+|++|++|+|.+++..
T Consensus 350 ~~iddl~~~vl~eW~rL~~~vteaEV~RAKn~Lkt~ 385 (467)
T KOG0960|consen 350 TMIDDLIHSVLKEWMRLATSVTEAEVERAKNQLKTN 385 (467)
T ss_pred hhHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 777888888888888888899999999999988753
No 14
>KOG0960 consensus Mitochondrial processing peptidase, beta subunit, and related enzymes (insulinase superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=1.8e-27 Score=231.72 Aligned_cols=283 Identities=13% Similarity=0.093 Sum_probs=225.3
Q ss_pred cccCCceEEEeecCCCcEEEEEEEeeCCCCCc-ccccChHHHHHHhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccCC
Q 005848 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIH 442 (674)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~Gt~~~~~~el~~~i~~~~g~l~~~~~~~~~~ 442 (674)
++.||++|..... ......+++|+++|+..| ++..+.++|.++|.++||++++...+..+++.+|+-+|++++.
T Consensus 38 tL~NGlrVaTE~~-~a~TATVGVwidaGSR~EnekNNG~ahFLEhlaFKGT~~Rs~~alElEieniGahLNAytSR---- 112 (467)
T KOG0960|consen 38 TLPNGLRVATEHN-SASTATVGVWIDAGSRFENEKNNGTAHFLEHLAFKGTKNRSQAALELEIENIGAHLNAYTSR---- 112 (467)
T ss_pred EcCCCcEEEeccC-CCcceEEEEEeccCccccccccccHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHhcccccc----
Confidence 4689999988776 666889999999999988 6667888888888889999999999999999999999999986
Q ss_pred CCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCch--HHHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhhh
Q 005848 443 GKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQ--QRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGW 520 (674)
Q Consensus 443 ~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~--~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 520 (674)
|.+.|+++|+++++++++++|+||++++.+.+. ++.+.++.++.+..+.+.. .+....+-+..+.+.|
T Consensus 113 ------eqT~yyakal~~dv~kavdiLaDIlqns~L~~s~IerER~vILrEmqevd~~~~----eVVfdhLHatafQgtP 182 (467)
T KOG0960|consen 113 ------EQTVYYAKALSKDVPKAVDILADILQNSKLEESAIERERDVILREMQEVDKNHQ----EVVFDHLHATAFQGTP 182 (467)
T ss_pred ------cceeeehhhccccchHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHhhhh----HHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999753 5777777777777765433 6788888888888999
Q ss_pred HHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCccc-c
Q 005848 521 ISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVER-V 599 (674)
Q Consensus 521 ~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~~-~ 599 (674)
+++.+-|. .+.++.|. ++||+++-+.+|.+.+|+++.+|.++ .+++.++.+++|++++....+.. +
T Consensus 183 L~~tilGp--~enI~si~----------r~DL~~yi~thY~~~RmVlaaaGgV~-He~lv~la~k~fg~~~~~~~~~~~~ 249 (467)
T KOG0960|consen 183 LGRTILGP--SENIKSIS----------RADLKDYINTHYKASRMVLAAAGGVK-HEELVKLAEKYFGDLSKLQTGDKVP 249 (467)
T ss_pred ccccccCh--hhhhhhhh----------HHHHHHHHHhcccCccEEEEecCCcC-HHHHHHHHHHHcCCCcccccCcCCC
Confidence 98866554 46666654 48999999999999999999999997 68999999999999764322111 1
Q ss_pred cccccCCCCcEEEE--cCcCeeEEEEecccCCCCCCcchHHHHHHHHhc------------CccchHHHhhcCCCCCc--
Q 005848 600 KWKAHLPSANEAIV--IPTQVNYVGKAANIFETGYKLNGSAYVISKHIS------------NVWLWDRVRVSGGAYGG-- 663 (674)
Q Consensus 600 ~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~d~~al~vl~~iLg------------~s~L~~~IRekG~aYg~-- 663 (674)
..++..-...++.. -+.|-.|++++..++++.+||+.+++|+++|+| +|+|-+.+-+..+|=+.
T Consensus 250 ~~~~~~FtgsEvR~rdd~lP~a~~AiAVEG~~w~~pD~~~l~van~iiG~wdr~~g~g~~~~s~La~~~~~~~l~~sfqs 329 (467)
T KOG0960|consen 250 LVPPARFTGSEVRVRDDDLPLAHIAIAVEGVSWAHPDYFALMVANTIIGNWDRTEGGGRNLSSRLAQKIQQDQLCHSFQS 329 (467)
T ss_pred CCCCccccCceeeecCCCCchhheeeeEecCCcCCccHHHHHHHHHHhhhhhcccCCccCCccHHHHHHHHHHHHHHHhh
Confidence 11111122233333 346778999999999999999999999999999 67888888775554332
Q ss_pred ccccCCCCCCC
Q 005848 664 FCDFDSHSGVL 674 (674)
Q Consensus 664 ~~~~~~~~G~f 674 (674)
++--..++|+|
T Consensus 330 Fnt~YkDTGLw 340 (467)
T KOG0960|consen 330 FNTSYKDTGLW 340 (467)
T ss_pred hhcccccccce
Confidence 11112466765
No 15
>PRK15101 protease3; Provisional
Probab=99.95 E-value=6e-27 Score=278.13 Aligned_cols=282 Identities=14% Similarity=0.058 Sum_probs=215.9
Q ss_pred cccCCceEEEeecCCCcEEEEEEEeeCCCCCc-ccccChHHHHHHhhhcCCCCCC-HHHHHHHHhhcccceEEeeeeccC
Q 005848 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPLFCQSLKEMGTKDLS-FVQLDQLIGRKTGGISVYPFTSSI 441 (674)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~Gt~~~~-~~el~~~i~~~~g~l~~~~~~~~~ 441 (674)
++.||++|++.+.++.+.+.+.+++++|++.+ ++.+++++|++||+++||++++ ..++++.++.+||.+|++|+.
T Consensus 48 ~L~NGL~v~l~~~~~~~~~~~~l~v~~Gs~~ep~~~~GlAHflEHmlf~GT~~~p~~~~~~~~l~~~Gg~~NA~T~~--- 124 (961)
T PRK15101 48 RLDNGMTVLLVSDPQAVKSLAALALPVGSLEDPDAQQGLAHYLEHMVLMGSKKYPQPDSLAEFLKKHGGSHNASTAS--- 124 (961)
T ss_pred EeCCCCEEEEEeCCCCcceeEEEEeCcCCCCCCCCCCchHHHHHHHHhcCCccCCCcchHHHHHHHhCCCccceECC---
Confidence 57899999999999999999999999999976 5668888888888889999995 689999999999999999975
Q ss_pred CCCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchH--HHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhh
Q 005848 442 HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQ--RFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAG 519 (674)
Q Consensus 442 ~~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~--~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 519 (674)
+.++|++.+++++++.+|+++++++.+|.|++.+ +++.++.+++... . +++...+...+...++++|
T Consensus 125 -------d~T~y~~~~~~~~l~~aL~~~ad~~~~P~f~~~~~erE~~~v~~E~~~~---~-~~~~~~~~~~~~~~~~~~h 193 (961)
T PRK15101 125 -------YRTAFYLEVENDALPPAVDRLADAIAEPLLDPKNADRERNAVNAELTMA---R-SRDGMRMAQVSAETINPAH 193 (961)
T ss_pred -------CceEEEEEcCHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHh---c-CCHHHHHHHHHHhhCCCCC
Confidence 9999999999999999999999999999999542 5555555444433 2 2344667777787888999
Q ss_pred hHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCcccc
Q 005848 520 WISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERV 599 (674)
Q Consensus 520 ~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~~~ 599 (674)
||++...| +.+.|..+.. ..++++|++||+++|.|+||+++|+||++ .+++.++++++|++||....+.+.
T Consensus 194 p~~~~~~G--~~etl~~~~~------~~~~~~L~~f~~~~Y~p~nm~lvv~G~~~-~~~l~~~~~~~F~~~~~~~~~~~~ 264 (961)
T PRK15101 194 PGSRFSGG--NLETLSDKPG------SKLQDALVDFYQRYYSANLMKAVIYSNQP-LPELAKLAADTFGRVPNKNASVPE 264 (961)
T ss_pred CcccCCCC--CHHHhhcCCc------hHHHHHHHHHHHHhCcccceEEEEEcCCC-HHHHHHHHHHHhccCCCCCCCCCC
Confidence 98776544 4556554311 12568999999999999999999999998 789999999999999875432111
Q ss_pred -cccccCC--CCcEEEEcC-cCeeEEEEecccCCCCCC-cchHHHHHHHHhc---CccchHHHhhcCCCCCcccccC
Q 005848 600 -KWKAHLP--SANEAIVIP-TQVNYVGKAANIFETGYK-LNGSAYVISKHIS---NVWLWDRVRVSGGAYGGFCDFD 668 (674)
Q Consensus 600 -~~~~~~~--~~~~~~~~~-~~~~~v~~~~~~~~~~~~-d~~al~vl~~iLg---~s~L~~~IRekG~aYg~~~~~~ 668 (674)
..+...+ ........| .+++.+.++++.++..+. +..+..+++.+|| .++|+..|+++|+|||+++++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~p~~~~~~~~~~~~~l~~ll~~~~~g~l~~~L~~~gla~~v~s~~~ 341 (961)
T PRK15101 265 ITVPVVTDAQKGIIIHYVPAQPRKVLRVEFRIDNNSAKFRSKTDEYISYLIGNRSPGTLSDWLQKQGLAEGISAGAD 341 (961)
T ss_pred CCCCCCCHHHcCeEEEEEECCCCcEEEEEEecCCcHHHHhhCHHHHHHHHhcCCCCCcHHHHHHHcCccceeeeccc
Confidence 1111111 111222223 345667777877654322 3346788999998 5678888987899999988765
No 16
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=5.3e-25 Score=214.84 Aligned_cols=318 Identities=18% Similarity=0.276 Sum_probs=237.0
Q ss_pred EEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHHhh
Q 005848 11 VFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYFDA 90 (674)
Q Consensus 11 ~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~d~ 90 (674)
.++.|+++|...-+|++||+|.|.|+.|.+++.++++.++ +..|+...|.+++|.+.|. .++..++++.++.++.|.
T Consensus 51 yIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~L--E~~GGn~~cqsSRetm~Ya-as~~~~~v~sm~~lLadt 127 (472)
T KOG2067|consen 51 YIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAEL--EKLGGNCDCQSSRETMMYA-ASADSDGVDSMVELLADT 127 (472)
T ss_pred EEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHH--HHhCCcccccccHhhhHHH-HHhhhcccHHHHHHHHHH
Confidence 5778999999999999999999999999999999866555 7789999999999999998 477889999999999999
Q ss_pred hhCCCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCCCH
Q 005848 91 VFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTF 170 (674)
Q Consensus 91 ~~~P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~i~~lt~ 170 (674)
+.+|.|.+++ ...+ |..|.-|+.....+|..++.+.++.+.|.+++.+.+..+..+.|+.|+.
T Consensus 128 V~~P~~~d~e--v~~~---------------~~~v~~E~~el~~~Pe~lL~e~iH~Aay~~ntlg~pl~cp~~~i~~I~~ 190 (472)
T KOG2067|consen 128 VLNPKFTDQE--VEEA---------------RRAVKYEIEELWMRPEPLLTEMIHSAAYSGNTLGLPLLCPEENIDKINR 190 (472)
T ss_pred HhcccccHHH--HHHH---------------HHhhhheccccccCchhhHHHHHHHHHhccCcccccccCChhhhhhhhH
Confidence 9999999999 7776 7888889988888999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhhhccccccccc---ccccCCCCcchhHH-------------HHHHh-
Q 005848 171 EEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFS---LRENNTGSFPRGLS-------------LMLRS- 233 (674)
Q Consensus 171 ~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~~~~~~~~e~~---~~~~~~~~~p~~~~-------------~~~~~- 233 (674)
+.+.+|-+++|+|++|++..+| |+++++.+.++ ..+..++.. .......++-.|.. .+...
T Consensus 191 ~~l~~yl~~~ytp~rmVlA~vG-V~heelv~~~~-~~~~~~~s~~~p~i~~~~aQYtGG~~~~~~d~~~~~~g~EltHv~ 268 (472)
T KOG2067|consen 191 EVLEEYLKYFYTPERMVLAGVG-VEHEELVEIAE-KLLGDLPSTKVPPIDESKAQYTGGELKIDTDAPQVTGGPELTHVV 268 (472)
T ss_pred HHHHHHHHhcCChhheEeeecC-CCHHHHHHHHH-HHhccCCccCCCCcccchhhccccccccCCCCccccCccceeeee
Confidence 9999999999999999999999 99999999996 555444331 00011111110100 00000
Q ss_pred ----hhhcccCCCccccccccchHHHHHHHHHccC-------CcchHHHHH----HHhh-----------ccCCCeEEEE
Q 005848 234 ----MGKWIYDMNPFEPLKYEKPLMALKARLAEEG-------SKAVFSPLI----EKYI-----------LNNPHCVTVE 287 (674)
Q Consensus 234 ----~~~~~~~~~~~~~l~~~~~l~~l~~~l~~~~-------s~~~~~~l~----~~~~-----------~~~~~~~~i~ 287 (674)
..+|.+. | ...+..|.-.++++. +..-|+.++ .+|. -.+...+.|.
T Consensus 269 lg~Eg~~~~de-D-------~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv~sctAfnhsy~DtGlfgi~ 340 (472)
T KOG2067|consen 269 LGFEGCSWNDE-D-------FVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWVYSCTAFNHSYSDTGLFGIY 340 (472)
T ss_pred EeeccCCCCCh-h-------HHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHHHHhhhhhccccCCceeEEe
Confidence 0111110 1 123455555555321 112243333 3321 0233446777
Q ss_pred EecCcCchhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC-------------------CCCChhhhccCCCCC
Q 005848 288 MQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQE-------------------TPDPPEALRSVPSLS 348 (674)
Q Consensus 288 ~~~d~~~~~~~~~~~~~~l~~~~~~~s~eel~~~k~~~~~~~~~~~-------------------~~~~~e~l~~lp~l~ 348 (674)
..++|+.+......+.+++.....+++++||+|+|.+++...-.+. +.-+.+.+..+..++
T Consensus 341 ~s~~P~~a~~aveli~~e~~~~~~~v~~~el~RAK~qlkS~LlMNLESR~V~~EDvGRQVL~~g~rk~p~e~~~~Ie~lt 420 (472)
T KOG2067|consen 341 ASAPPQAANDAVELIAKEMINMAGGVTQEELERAKTQLKSMLLMNLESRPVAFEDVGRQVLTTGERKPPDEFIKKIEQLT 420 (472)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccccchhHHHHhHHHHhccCcCCHHHHHHHHHhcC
Confidence 7888888888888888888888888999999999999885322211 111225566678899
Q ss_pred CCCCCCCCCC
Q 005848 349 LRDIPKEPIR 358 (674)
Q Consensus 349 ~~di~~~~~~ 358 (674)
++||.+...+
T Consensus 421 ~~DI~rva~k 430 (472)
T KOG2067|consen 421 PSDISRVASK 430 (472)
T ss_pred HHHHHHHHHH
Confidence 9999776554
No 17
>PTZ00432 falcilysin; Provisional
Probab=99.90 E-value=1.1e-22 Score=238.70 Aligned_cols=272 Identities=10% Similarity=0.061 Sum_probs=198.5
Q ss_pred ccCCceEEEeecCC--CcEEEEEEEeeCCCCCcccccChHHHHHHhhhcCCCCCCHHHHHHHHhhcc--cceEEeeeecc
Q 005848 365 DINGVKVLQHDLFT--NDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKT--GGISVYPFTSS 440 (674)
Q Consensus 365 ~~nG~~v~~~~~~~--~~~v~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Gt~~~~~~el~~~i~~~~--g~l~~~~~~~~ 440 (674)
..||++|++.+.+. .+.+.+.++|++|+.+ ..+++++.+||+.+||++++..++...++..| +.+||+|+.
T Consensus 97 ~~nGl~vl~~~~~d~~~~~~~f~i~f~T~~~d---~~G~aH~LEH~~f~GS~k~p~~~~~~~l~~~gl~~~lNA~T~~-- 171 (1119)
T PTZ00432 97 KKTGLQVISLKTNDSSGKEMCFDFYVPTPPHN---DKGIPHILEHSVLSGSKKYNYKDSFSLLVQGGFNSFLNAYTFK-- 171 (1119)
T ss_pred cCCCCEEEEEecCCCccceeEEEEEecCCCCC---CcchhHHHHHHHhCCCCCCCcccHHHHHHhcCcCCCccccCCC--
Confidence 46899999887643 3578899999998632 36777777777778999999999999998866 779999975
Q ss_pred CCCCCCCeeEEEEEEEEccc-cHHHHHHHHHHHHhcCCCCchHHH---------------------------------HH
Q 005848 441 IHGKEDPCCCMVVRGKAMAG-QAEDLFNLFNCVLQEVQLTDQQRF---------------------------------KQ 486 (674)
Q Consensus 441 ~~~~~~~~~~~~~~~~~l~~-~l~~~l~ll~dil~~p~f~~~~~~---------------------------------~~ 486 (674)
|+++|++.++.+ ++..+++++.|++++|.|++.+.+ +.
T Consensus 172 --------D~T~Y~~~~~~e~d~~~~ldv~~d~v~~P~~~~~~~~f~qEgwh~E~~~~~~~~~~~~e~~~~~~~~l~~kg 243 (1119)
T PTZ00432 172 --------DRTSYLFASTNEKDFYNTADVYMDSVFQPNILEDKDIFKQEGWHYKVTKLKDDEKNADELGNVHDRHVSYSG 243 (1119)
T ss_pred --------CceEEEeccCCHHHHHHHHHHHHHHHhCcCcccccchhhhhhhhccccccccccccccccccccccccchhh
Confidence 999999999986 699999999999999999753210 32
Q ss_pred HH-HHHHHhhhhhhccCcHHHHHHHHHhhcChhhhHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCc
Q 005848 487 FV-SQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGC 565 (674)
Q Consensus 487 i~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~ 565 (674)
|+ .+++... +++..++...+...++ +|+|++..+|. .+.|..+ ..++|++||+++|+|+|+
T Consensus 244 VV~~Emk~~~-----~~p~~~~~~~~~~~lf-~~pY~~~~~G~--~~~I~~l----------t~e~l~~Fh~~~Y~P~N~ 305 (1119)
T PTZ00432 244 IVYSEMKKRF-----SDPLSFGYSVIYQNLF-SNVYKYDSGGD--PKDIVEL----------TYEELVEFYKTYYGPKTA 305 (1119)
T ss_pred HHHHHHHHhh-----CCHHHHHHHHHHHHHh-CCCCCCCCCCC--hHhhccC----------CHHHHHHHHHHhcCccce
Confidence 33 3333332 4566888888877788 99998877665 3445544 258999999999999999
Q ss_pred EEEEEeCCcchhhHHHHHHHHHhcCCCCCCcc--------ccccccc-CCCCcEEEE--c---CcCeeEEEEe-cccCC-
Q 005848 566 LINMTADGKNLKNSERFVGKFLDMLPTNSPVE--------RVKWKAH-LPSANEAIV--I---PTQVNYVGKA-ANIFE- 629 (674)
Q Consensus 566 ~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~--------~~~~~~~-~~~~~~~~~--~---~~~~~~v~~~-~~~~~- 629 (674)
+|+|+||++ .+++.+.++++|+.+|...... ..+.+.. .......+. . +.++.++.++ |++++
T Consensus 306 ~l~v~Gdid-~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~l~~~~w~~~p~ 384 (1119)
T PTZ00432 306 TVYFYGPND-VTERLEFVDNYLTKHPKTGQLSHTAYREDADENLLYEEYKDKPKHVKKKFSSHSEEEENLMSVSWLLNPK 384 (1119)
T ss_pred EEEEEcCCC-HHHHHHHHHHHHhhcccccccccccccccccccccccccccCCeEEEeccCCCccccccEEEEEEEcCCc
Confidence 999999998 7889999999998887542100 0000100 001112121 1 2234455554 86532
Q ss_pred ----------CCC-CcchHHHHHHHHhc---CccchHHHhhcCCCCCc-ccccC
Q 005848 630 ----------TGY-KLNGSAYVISKHIS---NVWLWDRVRVSGGAYGG-FCDFD 668 (674)
Q Consensus 630 ----------~~~-~d~~al~vl~~iLg---~s~L~~~IRekG~aYg~-~~~~~ 668 (674)
..+ +++.++.||+++|| +|+|+++|||+|++|++ ++++.
T Consensus 385 ~~~~~~~~~~~~d~~~~~AL~VLs~lLggg~sS~L~q~LrE~GLa~svv~~~~~ 438 (1119)
T PTZ00432 385 HNGSKDYDKSLIDPVDYLALLVLNYLLLGTPESVLYKALIDSGLGKKVVGSGLD 438 (1119)
T ss_pred cccccccccccCCHHHHHHHHHHHHHHcCCCccHHHHHHHhcCCCcCCCcCccc
Confidence 234 68999999999998 89999999999999985 44443
No 18
>KOG2067 consensus Mitochondrial processing peptidase, alpha subunit [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=2.4e-20 Score=182.46 Aligned_cols=284 Identities=14% Similarity=0.071 Sum_probs=210.9
Q ss_pred cccCCceEEEeecCCCcEEEEEEEeeCCCCCc-ccccChHHHHHHhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccCC
Q 005848 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIH 442 (674)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~Gt~~~~~~el~~~i~~~~g~l~~~~~~~~~~ 442 (674)
++.||++|.-.+.+ .+.+.++++++.|++.| ....++++|.+-|.++.|.+++..++...+|.+||..+++++.
T Consensus 29 tL~NGlkvase~~p-g~f~~vGlyIdsGsrYE~~~~~GisH~lerLAF~ST~~~~~~ei~~~LE~~GGn~~cqsSR---- 103 (472)
T KOG2067|consen 29 TLPNGLKVASENTP-GQFCTVGLYIDSGSRYEAKYFSGISHFLERLAFKSTERFSSKEILAELEKLGGNCDCQSSR---- 103 (472)
T ss_pred ecCCccEEeccCCC-CCceEEEEEEecCccccCcCcccHHHHHHHHhhccccCCcHHHHHHHHHHhCCcccccccH----
Confidence 57899999887766 55999999999999987 4556788888878788999999999999999999999999875
Q ss_pred CCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhhhHH
Q 005848 443 GKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWIS 522 (674)
Q Consensus 443 ~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 522 (674)
|.+.|.+++.++.++.+++||+|.+.+|.|.| +++.......+-.+++-... |..+..+.+-+.-|.+..++
T Consensus 104 ------etm~Yaas~~~~~v~sm~~lLadtV~~P~~~d-~ev~~~~~~v~~E~~el~~~-Pe~lL~e~iH~Aay~~ntlg 175 (472)
T KOG2067|consen 104 ------ETMMYAASADSDGVDSMVELLADTVLNPKFTD-QEVEEARRAVKYEIEELWMR-PEPLLTEMIHSAAYSGNTLG 175 (472)
T ss_pred ------hhhHHHHHhhhcccHHHHHHHHHHHhcccccH-HHHHHHHHhhhheccccccC-chhhHHHHHHHHHhccCccc
Confidence 89999999999999999999999999999996 44444444444444444433 35666666655555443333
Q ss_pred HHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCccccccc
Q 005848 523 EQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWK 602 (674)
Q Consensus 523 ~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 602 (674)
.+.... .+.+.+|. .+.|..|.+++|+|++|+++-+|=.. +++++..++++++||+.+.+......
T Consensus 176 ~pl~cp--~~~i~~I~----------~~~l~~yl~~~ytp~rmVlA~vGV~h--eelv~~~~~~~~~~~s~~~p~i~~~~ 241 (472)
T KOG2067|consen 176 LPLLCP--EENIDKIN----------REVLEEYLKYFYTPERMVLAGVGVEH--EELVEIAEKLLGDLPSTKVPPIDESK 241 (472)
T ss_pred ccccCC--hhhhhhhh----------HHHHHHHHHhcCChhheEeeecCCCH--HHHHHHHHHHhccCCccCCCCcccch
Confidence 222221 23333332 47899999999999999999999774 68999999999999975432111111
Q ss_pred ccCCCCcEEEEcC-------cCeeEEEEecccCCCCCCcchHHHHHHHHhc--------------CccchHHHhhc-CCC
Q 005848 603 AHLPSANEAIVIP-------TQVNYVGKAANIFETGYKLNGSAYVISKHIS--------------NVWLWDRVRVS-GGA 660 (674)
Q Consensus 603 ~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~d~~al~vl~~iLg--------------~s~L~~~IRek-G~a 660 (674)
.+....--.+..+ ..-+|+++|+.++++.++|..++.||+.+|| .|||+.+|=-+ -|.
T Consensus 242 aQYtGG~~~~~~d~~~~~~g~EltHv~lg~Eg~~~~deD~v~~avLq~lmGGGGSFSAGGPGKGMySrLY~~vLNry~wv 321 (472)
T KOG2067|consen 242 AQYTGGELKIDTDAPQVTGGPELTHVVLGFEGCSWNDEDFVALAVLQMLMGGGGSFSAGGPGKGMYSRLYLNVLNRYHWV 321 (472)
T ss_pred hhccccccccCCCCccccCccceeeeeEeeccCCCCChhHHHHHHHHHHhcCCcccCCCCCCcchHHHHHHHHHhhhHHH
Confidence 1111110011111 1356899999999999999999999999998 46899988887 899
Q ss_pred CCcccccC--CCCCCC
Q 005848 661 YGGFCDFD--SHSGVL 674 (674)
Q Consensus 661 Yg~~~~~~--~~~G~f 674 (674)
|++-++.. .++|+|
T Consensus 322 ~sctAfnhsy~DtGlf 337 (472)
T KOG2067|consen 322 YSCTAFNHSYSDTGLF 337 (472)
T ss_pred HHhhhhhccccCCcee
Confidence 98766554 567876
No 19
>COG1025 Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=3.6e-18 Score=186.84 Aligned_cols=282 Identities=13% Similarity=0.083 Sum_probs=215.9
Q ss_pred cccCCceEEEeecCCCcEEEEEEEeeCCCCCc-ccccChHHHHHHhhhcCCCCC-CHHHHHHHHhhcccceEEeeeeccC
Q 005848 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPLFCQSLKEMGTKDL-SFVQLDQLIGRKTGGISVYPFTSSI 441 (674)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~Gt~~~-~~~el~~~i~~~~g~l~~~~~~~~~ 441 (674)
..+||+++++...|..+-....+.+.+|+.++ .+.++++||++||.++||+++ ....+...|..+||+-||+|..
T Consensus 28 ~LpNGl~~LlisDP~a~ks~aAL~V~vGs~~DP~e~~GLAHflEHmlfmGseKYP~~~~f~~fLskhgGs~NA~T~~--- 104 (937)
T COG1025 28 KLPNGLRALLVSDPQADKSSAALVVPVGSFDDPEEYPGLAHFLEHMLFMGSEKYPDEGGFSEFLSKHGGSHNASTAG--- 104 (937)
T ss_pred ECCCCceEEEecCCCCCccceeEEeecCCCCChhhcccHHHHHHHHHHhcCccCCCccchHHHHHHcCCccccccCC---
Confidence 46899999999999999999999999999876 778999999999999999998 5788999999999999999964
Q ss_pred CCCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCch--HHHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhh
Q 005848 442 HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQ--QRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAG 519 (674)
Q Consensus 442 ~~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~--~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 519 (674)
+.|+|++.+..+.++.+|+-+++.+.+|-|+.+ +|++..+.++ ....+.+.+ ....+.......++|
T Consensus 105 -------~~T~fyFeV~~~al~~ALDrFa~ff~~PLf~~e~~dRE~~AV~sE---~~~~~~~D~-~R~~~~~~~~~np~H 173 (937)
T COG1025 105 -------ERTAFYFEVENDALEGALDRFADFFIEPLFNKEALDRERNAVNSE---FTMNLTSDG-WRMYQVQALTANPGH 173 (937)
T ss_pred -------CceeEEEEecHHHHHHHHHHHHHHHhccccChHHHHHHHHHHHHH---HhcCcCchH-HHHHHHHHhhcCCCC
Confidence 889999999999999999999999999999842 3555444433 334444555 445556677789999
Q ss_pred hHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCcccc
Q 005848 520 WISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERV 599 (674)
Q Consensus 520 ~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~~~ 599 (674)
|+++- +.|.+++|...- -..+.+.|++||+++|+++||.++|-|+-. .+++.++..++|+.+|......+.
T Consensus 174 P~srF--s~GN~~TL~~~p------~~~v~~el~ef~~~~YSa~~M~lviyg~q~-ldeL~~~a~~~F~~Ipn~~~~~p~ 244 (937)
T COG1025 174 PLSKF--STGNLETLSDKP------GLVVQQELKEFHEKHYSANNMKLVIYGNQP-LDELAKLAADLFGDIPNRARKIPP 244 (937)
T ss_pred Ccccc--CCCChhhhccCC------CchHHHHHHHHHHHhcChhheEEEEecCCC-HHHHHHHHHHHhCcCCCCCCCCCC
Confidence 98773 344455555321 124678999999999999999999999996 899999999999999865543221
Q ss_pred -ccccc--CCCCcEEEEcCc-CeeEEEEecccCCCCCCc-chHHHHHHHHhc---CccchHHHhhcCCCCCcccccC
Q 005848 600 -KWKAH--LPSANEAIVIPT-QVNYVGKAANIFETGYKL-NGSAYVISKHIS---NVWLWDRVRVSGGAYGGFCDFD 668 (674)
Q Consensus 600 -~~~~~--~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~d-~~al~vl~~iLg---~s~L~~~IRekG~aYg~~~~~~ 668 (674)
+.++. ....+.+...|. +.-.+.+.|+.++...+. .-....++++|| .+-|-.-|-++||+=+..+...
T Consensus 245 ~p~p~~~d~~t~~ii~i~p~~~~~~L~i~f~i~~~~~~~~~~~~~~~s~Lig~es~gsL~~~Lk~~Glit~l~a~~~ 321 (937)
T COG1025 245 IPVPVVTDEQTGKIIHIVPAKPRPRLRIYFPIDDNSAKFRSKPDEYLSHLIGNESPGSLLAWLKKQGLITELSAGLD 321 (937)
T ss_pred CCCCCCChHHhCceEEeccCCCCceEEEEEEcCCcccccccCCHHHHHHHhccCCCchHHHHHHhccchhhhccccc
Confidence 11111 112233344443 345667788887766665 577888999999 3456688888999887766655
No 20
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.79 E-value=1.2e-19 Score=165.85 Aligned_cols=133 Identities=29% Similarity=0.443 Sum_probs=120.8
Q ss_pred CcEEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHH
Q 005848 9 NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYF 88 (674)
Q Consensus 9 ~~~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~ 88 (674)
..+|++|++.|+.++.|++|+++||+++||++++..+ +.+.+ +.+|+.+|+.|+.|+|.|.+ +++.++++.+|+++.
T Consensus 16 ~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~-l~~~l-~~~G~~~~~~t~~d~t~~~~-~~~~~~~~~~l~~l~ 92 (149)
T PF00675_consen 16 SLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDE-LQEEL-ESLGASFNASTSRDSTSYSA-SVLSEDLEKALELLA 92 (149)
T ss_dssp EEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHH-HHHHH-HHTTCEEEEEEESSEEEEEE-EEEGGGHHHHHHHHH
T ss_pred EEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhh-hHHHh-hhhccccceEecccceEEEE-EEecccchhHHHHHH
Confidence 3478889999999999999999999999999999965 66666 55699999999999999996 567899999999999
Q ss_pred hhhhCCCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCC
Q 005848 89 DAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGD 161 (674)
Q Consensus 89 d~~~~P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~ 161 (674)
+++++|.|++++ |+++ |..+..|++....+|..++.+.+.+.+|.+|||++++.|+
T Consensus 93 ~~~~~P~f~~~~--~~~~---------------r~~~~~ei~~~~~~~~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 93 DMLFNPSFDEEE--FERE---------------REQILQEIEEIKENPQELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp HHHHSBGGCHHH--HHHH---------------HHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred HHHhCCCCCHHH--HHHH---------------HHHHHHHHHHHHCCHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 999999999999 9987 9999999999999999999999999999999999998775
No 21
>KOG0959 consensus N-arginine dibasic convertase NRD1 and related Zn2+-dependent endopeptidases, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=4.6e-17 Score=181.55 Aligned_cols=283 Identities=13% Similarity=0.094 Sum_probs=215.7
Q ss_pred cccCCceEEEeecCCCcEEEEEEEeeCCCCCc-ccccChHHHHHHhhhcCCCCCC-HHHHHHHHhhcccceEEeeeeccC
Q 005848 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPLFCQSLKEMGTKDLS-FVQLDQLIGRKTGGISVYPFTSSI 441 (674)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~Gt~~~~-~~el~~~i~~~~g~l~~~~~~~~~ 441 (674)
.+.||+++++...|+.+...+.+-+.+||+.+ ++.++++||++||.++||+++. ..++...+..+||+-||+|..
T Consensus 32 ~L~Ngl~alLisDp~tD~ssaal~V~vGS~~DP~dl~GLAHF~EHMlFmGS~KYP~En~y~~~lsk~gGssNA~T~~--- 108 (974)
T KOG0959|consen 32 ELTNGLRALLISDPKTDKSSAALDVKVGSFSDPEDLQGLAHFCEHMLFMGSEKYPDENEYSKFLSKNGGSSNAYTDS--- 108 (974)
T ss_pred EecCCceEEEecCCCCCccceeeeeeccccCCccccccHHHHHHHHHhhccccCCCcchhHHHHHhcCCcccccccc---
Confidence 46899999999888888888899999999865 7789999999999999999986 577788899999999999975
Q ss_pred CCCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhhhH
Q 005848 442 HGKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWI 521 (674)
Q Consensus 442 ~~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 521 (674)
+.++|++-+-.++++.+|+.+++.+.+|.|.. +...+-+...-+..+.+..+.+ ........+...++||+
T Consensus 109 -------e~T~y~F~V~~~~l~~ALDrFaqFf~~Plf~~-~a~eREv~AVdSE~~~nl~~D~-wr~~ql~~~l~~~~hp~ 179 (974)
T KOG0959|consen 109 -------EHTNYYFDVQHDHLEGALDRFAQFFSDPLFNK-SATEREVGAVDSEHEKNLNSDG-WRFDQLLRSLSNPGHPY 179 (974)
T ss_pred -------ccceEEEecchHHHHHHHHHHHHHhhCcccCh-HHHHHHHHHHHHHHHhccCcch-hHHHHHHHHhcCCCCcc
Confidence 89999999999999999999999999999983 4444333444444444454444 55666778888899998
Q ss_pred HHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCcccccc
Q 005848 522 SEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKW 601 (674)
Q Consensus 522 ~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~~~~~ 601 (674)
+.--.| -.++|...-+ +. ++++.|.+||+++|.+++|+++|.|+.+ .+.+..++.+.|+..+....+.+ .+
T Consensus 180 ~kF~tG--N~~tL~~~p~---~~--~~r~~L~kF~k~~Yssn~M~l~i~G~es-lD~Le~lv~~~F~~i~N~~~~~p-~f 250 (974)
T KOG0959|consen 180 SKFSTG--NKKTLLEGPR---EI--DLRDELLKFYKNWYSSNIMTLVIVGKES-LDVLESLVTRLFDEISNKKKPRP-VF 250 (974)
T ss_pred hhcccc--chhhhhhccc---cc--hHHHHHHHHHHhhcccccceEEEEcCCC-hhHHHHHHHHHcccccccCCCCC-cc
Confidence 874444 3555554422 11 6789999999999999999999999996 78888889999988876554432 23
Q ss_pred ccc--CC--CCcEEEEcCcC-eeEEEEecccCCCCC-CcchHHHHHHHHhc---CccchHHHhhcCCCCCccccc
Q 005848 602 KAH--LP--SANEAIVIPTQ-VNYVGKAANIFETGY-KLNGSAYVISKHIS---NVWLWDRVRVSGGAYGGFCDF 667 (674)
Q Consensus 602 ~~~--~~--~~~~~~~~~~~-~~~v~~~~~~~~~~~-~d~~al~vl~~iLg---~s~L~~~IRekG~aYg~~~~~ 667 (674)
+.. .+ -++.....|.. ...+.+.|+.|+..+ -+.-+.+.+.+++| .+-|...||-+|||=+..+..
T Consensus 251 ~~~p~~~e~~~~~~~v~pik~~~~l~is~~~p~~~~~y~~kP~~y~~hLigheg~GSL~~~Lk~~gw~~sl~a~~ 325 (974)
T KOG0959|consen 251 PEPPFLPEELKKLVRVVPIKDGRSLMISWPVPPLNHHYKSKPLRYLSHLIGHEGPGSLLSYLKRLGWATSLEAGI 325 (974)
T ss_pred cCCCCChHHhCcEEEEEeccccceEEEEEecCCcccccccCcHHHHHHHhccCCcchHHHHHHHhhchheeecCC
Confidence 222 11 23445556655 345667788877543 45678888999998 566788999999987655543
No 22
>PF00675 Peptidase_M16: Insulinase (Peptidase family M16) This is family M16 in the peptidase classification. ; InterPro: IPR011765 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. The majority of the sequences in this entry are metallopeptidases and non-peptidase homologs belong to MEROPS peptidase family M16 (clan ME), subfamilies M16A, M16B and M16C; they include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The proteins classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. ; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 3P7L_A 3P7O_A 3TUV_A 3GO9_A 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B ....
Probab=99.61 E-value=8.8e-15 Score=133.67 Aligned_cols=147 Identities=14% Similarity=0.099 Sum_probs=120.4
Q ss_pred eEEEeecCCCcEEEEEEEeeCCCCCc-ccccChHHHHHHhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccCCCCCCCe
Q 005848 370 KVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIHGKEDPC 448 (674)
Q Consensus 370 ~v~~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~Gt~~~~~~el~~~i~~~~g~l~~~~~~~~~~~~~~~~ 448 (674)
+|++.+.+..+++.+.++|++|+..+ ...+++++++++|+..||++++..++.+.++.+||.++++++.
T Consensus 1 ~V~~~~~~~~~~~~~~l~~~~Gs~~e~~~~~G~a~ll~~l~~~gs~~~~~~~l~~~l~~~G~~~~~~t~~---------- 70 (149)
T PF00675_consen 1 KVVLVEDPGSPVVSVSLVFKAGSRYEPPGKPGLAHLLEHLLFRGSKKYSSDELQEELESLGASFNASTSR---------- 70 (149)
T ss_dssp EEEEEESTTSSEEEEEEEES-SGGGSCTTTTTHHHHHHHHTTSBBSSSBHHHHHHHHHHTTCEEEEEEES----------
T ss_pred CEEEEEcCCCCEEEEEEEEeeccCCCCCCCCchhhhhhhhcccccchhhhhhhHHHhhhhccccceEecc----------
Confidence 68888999999999999999999876 5557777777777778999999999999999999999999976
Q ss_pred eEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhhhHHHHhchh
Q 005848 449 CCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWISEQMGGV 528 (674)
Q Consensus 449 ~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~ 528 (674)
+++.|++++++++++++|+++++++.+|.|++ +.+.+...+....+.... +++..++...+.+..+.++||+.+..|.
T Consensus 71 d~t~~~~~~~~~~~~~~l~~l~~~~~~P~f~~-~~~~~~r~~~~~ei~~~~-~~~~~~~~~~l~~~~f~~~p~~~~~~~~ 148 (149)
T PF00675_consen 71 DSTSYSASVLSEDLEKALELLADMLFNPSFDE-EEFEREREQILQEIEEIK-ENPQELAFEKLHSAAFRGHPYGNPLLGP 148 (149)
T ss_dssp SEEEEEEEEEGGGHHHHHHHHHHHHHSBGGCH-HHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHTTSGGGSHSS-T
T ss_pred cceEEEEEEecccchhHHHHHHHHHhCCCCCH-HHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHhccCCCCCCCCCC
Confidence 99999999999999999999999999999995 444444444444444333 2335888999999999999998776653
No 23
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.53 E-value=1.1e-13 Score=136.66 Aligned_cols=173 Identities=16% Similarity=0.130 Sum_probs=148.8
Q ss_pred CcEEEEEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHH
Q 005848 9 NKVFGIVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYF 88 (674)
Q Consensus 9 ~~~~~~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~ 88 (674)
-++|+.|||+|+.++.|++|+|+...++-|+.++...+.+.. +..|+.++.++.+|+..|.+ ++..++.+-.|.++.
T Consensus 47 ~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~s--e~~GG~Lss~~tRe~~~~tv-t~lrd~~~~~l~~L~ 123 (429)
T KOG2583|consen 47 SLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRES--EQLGGTLSSTATRELIGLTV-TFLRDDLEYYLSLLG 123 (429)
T ss_pred EEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhh--HhhCceeeeeeecceEEEEE-EEecccHHHHHHHHH
Confidence 357999999999999999999999999999999999977766 66799999999999999996 668899999999999
Q ss_pred hhhhCCCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCC
Q 005848 89 DAVFFPKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKL 168 (674)
Q Consensus 89 d~~~~P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~i~~l 168 (674)
+.+..|.|.+++ +.... -..+..++ ...+|..++.+++++..|.+ ..+.+..-.--.+.++
T Consensus 124 ~V~~~paFkPwE--l~D~~--------------~~ti~~~l--~~~t~~~~a~e~lH~aAfRn-gLgnslY~p~~~vg~v 184 (429)
T KOG2583|consen 124 DVLDAPAFKPWE--LEDVV--------------LATIDADL--AYQTPYTIAIEQLHAAAFRN-GLGNSLYSPGYQVGSV 184 (429)
T ss_pred HhhcccCcCchh--hhhhh--------------hhhhHHHh--hhcChHHHHHHHHHHHHHhc-ccCCcccCCcccccCc
Confidence 999999999988 54330 03333333 34589999999999999976 7777764444568999
Q ss_pred CHHHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhh
Q 005848 169 TFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILS 204 (674)
Q Consensus 169 t~~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~ 204 (674)
+.++|++|-.++|...|++++-+| +|++.++.+.+
T Consensus 185 ss~eL~~Fa~k~fv~gn~~lvg~n-vd~~~L~~~~~ 219 (429)
T KOG2583|consen 185 SSSELKDFAAKHFVKGNAVLVGVN-VDHDDLKQFAD 219 (429)
T ss_pred cHHHHHHHHHHHhhccceEEEecC-CChHHHHHHHH
Confidence 999999999999999999999998 99999999986
No 24
>KOG2583 consensus Ubiquinol cytochrome c reductase, subunit QCR2 [Energy production and conversion]
Probab=99.33 E-value=2.3e-10 Score=113.51 Aligned_cols=249 Identities=12% Similarity=0.087 Sum_probs=165.9
Q ss_pred cccCCceEEEeecCCCcEEEEEEEeeCCCCCc-ccccChHHHHHHhhhcCCCCCCHHHHHHHHhhcccceEEeeeeccCC
Q 005848 364 GDINGVKVLQHDLFTNDVLYTEVVFDMSSLKQ-ELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGRKTGGISVYPFTSSIH 442 (674)
Q Consensus 364 ~~~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~Gt~~~~~~el~~~i~~~~g~l~~~~~~~~~~ 442 (674)
.+.||++|--.+.++. +..+.+.|++||+.+ ...+++.|+........|.+++...|.+.++..||.++.....
T Consensus 27 kl~ngL~Vas~e~~~~-is~l~l~~~AGSRYe~~~~~G~sHllr~f~g~~Tq~~sal~ivr~se~~GG~Lss~~tR---- 101 (429)
T KOG2583|consen 27 KLVNGLTVASREAPTA-ISSLSLAFRAGSRYEPADQQGLSHLLRNFVGRDTQERSALKIVRESEQLGGTLSSTATR---- 101 (429)
T ss_pred ccccceEEEeccCCCc-ceEEEEEEecCccCCccccccHHHHHHHhcccCccccchhhhhhhhHhhCceeeeeeec----
Confidence 4689999998887754 999999999999977 4456777777666667999999999999999999999998865
Q ss_pred CCCCCeeEEEEEEEEccccHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHhhhhhhccCcHHHHHHHHHhhcChhhhHH
Q 005848 443 GKEDPCCCMVVRGKAMAGQAEDLFNLFNCVLQEVQLTDQQRFKQFVSQSKARMENRLRGSGHGIAAARMDAKLNTAGWIS 522 (674)
Q Consensus 443 ~~~~~~~~~~~~~~~l~~~l~~~l~ll~dil~~p~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 522 (674)
|.+.+.+.++.++++-.+.+|.+++..|.|.+-|-...++..+..++. ...+...+++.+...-+..
T Consensus 102 ------e~~~~tvt~lrd~~~~~l~~L~~V~~~paFkPwEl~D~~~~ti~~~l~---~~t~~~~a~e~lH~aAfRn---- 168 (429)
T KOG2583|consen 102 ------ELIGLTVTFLRDDLEYYLSLLGDVLDAPAFKPWELEDVVLATIDADLA---YQTPYTIAIEQLHAAAFRN---- 168 (429)
T ss_pred ------ceEEEEEEEecccHHHHHHHHHHhhcccCcCchhhhhhhhhhhHHHhh---hcChHHHHHHHHHHHHHhc----
Confidence 999999999999999999999999999999854433333333333332 2345566666655544432
Q ss_pred HHhchhhHHHHHHHHHHHhhcCHHH-HHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCcccccc
Q 005848 523 EQMGGVSYLEFLQALEEKVDQDWAG-ISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKW 601 (674)
Q Consensus 523 ~~~~g~~~~~~l~~l~~~~~~~~~~-~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~~~~~ 601 (674)
|++..-+.... .... ..++|..|-+++|..+|++++=+|-. .+.++...++++- ++.+-+..+ .
T Consensus 169 ----gLgnslY~p~~------~vg~vss~eL~~Fa~k~fv~gn~~lvg~nvd--~~~L~~~~~~~~~-~~~~~~~k~--a 233 (429)
T KOG2583|consen 169 ----GLGNSLYSPGY------QVGSVSSSELKDFAAKHFVKGNAVLVGVNVD--HDDLKQFADEYAP-IRDGLPLKP--A 233 (429)
T ss_pred ----ccCCcccCCcc------cccCccHHHHHHHHHHHhhccceEEEecCCC--hHHHHHHHHHhcc-ccCCCCCCC--C
Confidence 22211111000 0000 14789999999999999987666544 3567777777721 111111100 0
Q ss_pred cccCCCCcEEEE-cCcCeeEEEEeccc-CCCCCCcchHHHHHHHHhc
Q 005848 602 KAHLPSANEAIV-IPTQVNYVGKAANI-FETGYKLNGSAYVISKHIS 646 (674)
Q Consensus 602 ~~~~~~~~~~~~-~~~~~~~v~~~~~~-~~~~~~d~~al~vl~~iLg 646 (674)
+...... +... ....-.||++...+ ..-+.++..+..|+.++||
T Consensus 234 ~a~~~gG-e~Rk~~~g~~~~v~vagegAAa~~~k~~~a~av~~~~Lg 279 (429)
T KOG2583|consen 234 PAKYSGG-EARKDARGNRVHVAVAGEGAAAGNLKVLAAQAVLLAALG 279 (429)
T ss_pred CccccCC-ccccccCCceeEEEEecCcccccchHHHHHHHHHHHHHh
Confidence 1111111 1111 12234466666555 4455789999999999999
No 25
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.32 E-value=3.2e-12 Score=120.99 Aligned_cols=119 Identities=16% Similarity=0.144 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCC---Ccccccccc--cCCCCcEEEEc--CcCeeEE
Q 005848 549 SSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNS---PVERVKWKA--HLPSANEAIVI--PTQVNYV 621 (674)
Q Consensus 549 ~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~---~~~~~~~~~--~~~~~~~~~~~--~~~~~~v 621 (674)
.++|++||+++|.|+||+++|+||++ .+++.+.++++|+.|+... ......... ........+.. +.++..+
T Consensus 4 ~e~l~~f~~~~y~p~n~~l~i~Gd~~-~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 82 (184)
T PF05193_consen 4 LEDLRAFYKKFYRPSNMTLVIVGDID-PDELEKLIEKYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDESQSIV 82 (184)
T ss_dssp HHHHHHHHHHHSSGGGEEEEEEESSG-HHHHHHHHHHHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSSSSEEE
T ss_pred HHHHHHHHHHhcCccceEEEEEcCcc-HHHHHHHHHhhhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 47999999999999999999999998 6799999999999998653 111111111 11222222222 3357789
Q ss_pred EEecccCCC-CCCcchHHHHHHHHhc---CccchHHHhhc-CCCCCcccccC
Q 005848 622 GKAANIFET-GYKLNGSAYVISKHIS---NVWLWDRVRVS-GGAYGGFCDFD 668 (674)
Q Consensus 622 ~~~~~~~~~-~~~d~~al~vl~~iLg---~s~L~~~IRek-G~aYg~~~~~~ 668 (674)
++++++++. ++++..++.+++++|+ +|+|+.++|++ |++|++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~ 134 (184)
T PF05193_consen 83 SIAFPGPPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNS 134 (184)
T ss_dssp EEEEEEEETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEE
T ss_pred ccccccccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeee
Confidence 999999888 9999999999999999 67999999975 99999988865
No 26
>COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only]
Probab=99.14 E-value=9.7e-10 Score=122.01 Aligned_cols=262 Identities=11% Similarity=0.048 Sum_probs=178.9
Q ss_pred cCCceEEEeecCCCcEEEEEEEeeCCCCCcccccChHHHHHHhhhcCCCCCCHHHHHHH-Hhhcccc-eEEeeeeccCCC
Q 005848 366 INGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQL-IGRKTGG-ISVYPFTSSIHG 443 (674)
Q Consensus 366 ~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Gt~~~~~~el~~~-i~~~~g~-l~~~~~~~~~~~ 443 (674)
..|+.++....++. -..+.+.|.+ .+.+. .+++|..+|+..+|.+++...+.--. +.+--+. +||.|..
T Consensus 28 ~TGa~l~hi~~~d~-~~vFsi~F~T--~p~ds-tGVaHiLEHtvlcGS~kYPvkdPF~~ml~rSLntF~NA~T~~----- 98 (978)
T COG1026 28 KTGAELAHIKNEDP-NNVFSIAFKT--EPHDS-TGVAHILEHTVLCGSKKYPVKDPFFKMLKRSLNTFLNAFTFP----- 98 (978)
T ss_pred cCCceEEEecCCCc-CceEEEEeec--CCCCC-CCcchHHHHHhhhCCCCCCCCChHHHHHHHhHHHHHhhccCC-----
Confidence 47888876655422 3345666665 44344 45555555566689999988765332 2222222 6777754
Q ss_pred CCCCeeEEEEEEEEcc-ccHHHHHHHHHHHHhcCCCCchHHHH------------------HHHHHHHHhhhhhhccCcH
Q 005848 444 KEDPCCCMVVRGKAMA-GQAEDLFNLFNCVLQEVQLTDQQRFK------------------QFVSQSKARMENRLRGSGH 504 (674)
Q Consensus 444 ~~~~~~~~~~~~~~l~-~~l~~~l~ll~dil~~p~f~~~~~~~------------------~i~~~~~~~~~~~~~~~~~ 504 (674)
|+++|-+++.. +++-..+.+..|.+++|...+ +.+. .|-.|++..+ .+++
T Consensus 99 -----D~T~YP~sS~~~~Df~NLl~VYlDavf~PlL~~-e~F~QEgwr~e~~~~~~l~~~GVVyNEMKGa~-----ss~~ 167 (978)
T COG1026 99 -----DKTVYPASSANEKDFYNLLSVYLDAVFHPLLTK-ESFLQEGWRIEFKDESNLKYKGVVYNEMKGAY-----SSGE 167 (978)
T ss_pred -----CcceeeccccCcchHHHHHHHHHHhhhCcccch-HHHhhhhhccccCCCccceeeeEEeehhcccc-----cCch
Confidence 88888877766 699999999999999998874 3221 1223333333 5778
Q ss_pred HHHHHHHHhhcChhhhHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHH
Q 005848 505 GIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVG 584 (674)
Q Consensus 505 ~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~ 584 (674)
.+..+.+...++|+..|...-+|.+ .-+.++ ..+++++||+++|.|.|+.+.+.|+++ .++..+.++
T Consensus 168 ~~~~~~~~~slfp~~ty~~~SGG~P--~~I~~L----------tyE~~r~FHkk~Y~pSN~~i~~yGni~-~~~~L~~ie 234 (978)
T COG1026 168 SVLSRAMQQSLFPGTTYGVNSGGDP--KNIPDL----------TYEEFRAFHKKHYHPSNCKIFVYGNIP-TERLLDFIE 234 (978)
T ss_pred hHHHHHHHHhhCCCccccccCCCCc--cccccc----------CHHHHHHHHHHhCCccceEEEEECCCC-HHHHHHHHH
Confidence 9999999999999998887777764 122222 358999999999999999999999998 678888888
Q ss_pred HH-HhcCCCCCCcccccccccC--C-CCcEEEEc-----CcCeeEEEEecccCCCCC-CcchHHHHHHHHhc---Cccch
Q 005848 585 KF-LDMLPTNSPVERVKWKAHL--P-SANEAIVI-----PTQVNYVGKAANIFETGY-KLNGSAYVISKHIS---NVWLW 651 (674)
Q Consensus 585 ~~-~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~-----~~~~~~v~~~~~~~~~~~-~d~~al~vl~~iLg---~s~L~ 651 (674)
+. +...++.....+.++.... + .......+ +..+.++.++|.+++..| .+..++.||..||- .|.|.
T Consensus 235 e~~l~~~~k~~~~~~i~~~~~~~~~~~~~~~ypi~~~~~de~q~~~~lsWl~~~~~d~~~~lal~vL~~iLl~~~asPl~ 314 (978)
T COG1026 235 EKVLRPFGKRELDVPIPDQKAFKKPRRKVLEYPISFDEEDEDQGLLSLSWLGGSASDAEDSLALEVLEEILLDSAASPLT 314 (978)
T ss_pred HhhhccccccccCCCCCcccccCcccccceeeccCCCCCCCceeEEEEEEecCCcccHHHHHHHHHHHHHHccCcccHHH
Confidence 77 5555444322222222211 1 11122223 233678889999988777 57899999999995 78999
Q ss_pred HHHhhcCCC
Q 005848 652 DRVRVSGGA 660 (674)
Q Consensus 652 ~~IRekG~a 660 (674)
+.|=|.|+.
T Consensus 315 ~~liesglg 323 (978)
T COG1026 315 QALIESGLG 323 (978)
T ss_pred HHHHHcCCC
Confidence 999997665
No 27
>PF05193 Peptidase_M16_C: Peptidase M16 inactive domain; InterPro: IPR007863 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. These metallopeptidases belong to MEROPS peptidase family M16 (clan ME). They include proteins, which are classified as non-peptidase homologues either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity. The peptidases in this group of sequences include: Insulinase, insulin-degrading enzyme (3.4.24.56 from EC) Mitochondrial processing peptidase alpha subunit, (Alpha-MPP, 3.4.24.64 from EC) Pitrlysin, Protease III precursor (3.4.24.55 from EC) Nardilysin, (3.4.24.61 from EC) Ubiquinol-cytochrome C reductase complex core protein I,mitochondrial precursor (1.10.2.2 from EC) Coenzyme PQQ synthesis protein F (3.4.99 from EC) These proteins do not share many regions of sequence similarity; the most noticeable is in the N-terminal section. This region includes a conserved histidine followed, two residues later by a glutamate and another histidine. In pitrilysin, it has been shown [] that this H-x-x-E-H motif is involved in enzymatic activity; the two histidines bind zinc and the glutamate is necessary for catalytic activity. The mitochondrial processing peptidase consists of two structurally related domains. One is the active peptidase whereas the other, the C-terminal region, is inactive. The two domains hold the substrate like a clamp [].; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 1BE3_B 1PP9_B 2A06_B 1SQB_B 1SQP_B 1L0N_B 1SQX_B 1NU1_B 1L0L_B 2FYU_B ....
Probab=99.09 E-value=2.8e-10 Score=107.63 Aligned_cols=156 Identities=21% Similarity=0.330 Sum_probs=97.5
Q ss_pred CCCHHHHHHHHHhhcCCCCeEEEEEeCCCHHHHHHHhhhcccccccccc---cccCCC-CcchhH----HHHH-------
Q 005848 167 KLTFEEFKEFHRKYYHPSNARIWFYGDDDPNERLRILSEASMNTIEFSL---RENNTG-SFPRGL----SLML------- 231 (674)
Q Consensus 167 ~lt~~~l~~f~~~~y~p~n~~l~i~G~~d~~~~~~~i~~~~~~~~e~~~---~~~~~~-~~p~~~----~~~~------- 231 (674)
++|.++|++||++||+|+||+++++||++++++.++|+ ..++.++... ...... ..+... ....
T Consensus 1 ~it~e~l~~f~~~~y~p~n~~l~i~Gd~~~~~~~~~i~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (184)
T PF05193_consen 1 NITLEDLRAFYKKFYRPSNMTLVIVGDIDPDELEKLIE-KYFGSLPKSSIPPKPKPRSPPLPPSEPQGKEIVIPSKDESQ 79 (184)
T ss_dssp C--HHHHHHHHHHHSSGGGEEEEEEESSGHHHHHHHHH-HHHTTSSHSCHGGSSSCSSSSSSCGGSSEEEEEEEESSSSS
T ss_pred CCCHHHHHHHHHHhcCccceEEEEEcCccHHHHHHHHH-hhhhhhccccccccccccccccccccccccccccccccccc
Confidence 58999999999999999999999999999999999995 7666665432 100000 000000 0000
Q ss_pred Hhh-hhcccCCCccccccccchHHHHHHHHHccCCcchHHHHHHHh-hc----------cCCCeEEEEEecCcCchhhHH
Q 005848 232 RSM-GKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKY-IL----------NNPHCVTVEMQPDPEKASRDE 299 (674)
Q Consensus 232 ~~~-~~~~~~~~~~~~l~~~~~l~~l~~~l~~~~s~~~~~~l~~~~-~~----------~~~~~~~i~~~~d~~~~~~~~ 299 (674)
..+ -.|. ..+.........+..|.+.+....+++++..+.++. +. .+...+.+.+.+.++..+++.
T Consensus 80 ~~v~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~s~l~~~lr~~~~l~y~v~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 157 (184)
T PF05193_consen 80 SIVSIAFP--GPPIKDSKDYFALNLLSSLLGNGMSSRLFQELREKQGLAYSVSASNSSYRDSGLFSISFQVTPENLDEAI 157 (184)
T ss_dssp EEEEEEEE--EEETGTSTTHHHHHHHHHHHHCSTTSHHHHHHHTTTTSESEEEEEEEEESSEEEEEEEEEEEGGGHHHHH
T ss_pred cccccccc--cccccccchhhHHHHHHHHHhcCccchhHHHHHhccccceEEEeeeeccccceEEEEEEEcCcccHHHHH
Confidence 000 0000 000001122345677777787766666888887442 11 122346677777777888888
Q ss_pred HHHHHHHHHH-HhcCCHHHHHHHHHHH
Q 005848 300 AAEKEILAKV-KSSMTKEDLAELARAT 325 (674)
Q Consensus 300 ~~~~~~l~~~-~~~~s~eel~~~k~~~ 325 (674)
+.+.+.++.+ +.|++++|++++|+++
T Consensus 158 ~~~~~~l~~l~~~~~s~~el~~~k~~L 184 (184)
T PF05193_consen 158 EAILQELKRLREGGISEEELERAKNQL 184 (184)
T ss_dssp HHHHHHHHHHHHHCS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 9999999998 6679999999999854
No 28
>KOG0961 consensus Predicted Zn2+-dependent endopeptidase, insulinase superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=98.76 E-value=1.9e-07 Score=98.41 Aligned_cols=268 Identities=12% Similarity=0.023 Sum_probs=173.8
Q ss_pred cCCceEEEeecCCCcEEEEEEEeeCCCCCcccccChHHHHHHhhhcCCCCCCHHHHHHHHhh-cccceEEeeeeccCCCC
Q 005848 366 INGVKVLQHDLFTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQLDQLIGR-KTGGISVYPFTSSIHGK 444 (674)
Q Consensus 366 ~nG~~v~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Gt~~~~~~el~~~i~~-~~g~l~~~~~~~~~~~~ 444 (674)
.-|++|...+.||. .|.-.+.|.+-..+ --++++..+||.++|.+++.+.-+-..+.. .-|..||-+..
T Consensus 27 ~Tkl~va~~~~pts-~vhG~f~v~TEa~~---d~G~PHTLEHL~FMGSKkYP~kGvLd~~anr~l~dtNAwTDt------ 96 (1022)
T KOG0961|consen 27 NTKLRVAIGEVPTS-MVHGAFSVVTEADS---DDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCLADTNAWTDT------ 96 (1022)
T ss_pred ccceEEEEeecCCc-ceeeeEEeeeeecC---CCCCchhHHHHhhhccccCCcccHHHHhhcchhccccccccc------
Confidence 34788888888887 77766666554333 245677777777899999999877665544 44567777765
Q ss_pred CCCeeEEEEEEEEcc-ccHHHHHHHHHHHHhcCCCCchHHHH-------------HHHHHHHHhhhhhhccCcHHHHHHH
Q 005848 445 EDPCCCMVVRGKAMA-GQAEDLFNLFNCVLQEVQLTDQQRFK-------------QFVSQSKARMENRLRGSGHGIAAAR 510 (674)
Q Consensus 445 ~~~~~~~~~~~~~l~-~~l~~~l~ll~dil~~p~f~~~~~~~-------------~i~~~~~~~~~~~~~~~~~~~a~~~ 510 (674)
|++.|.+++.. +.+-+.|....|-+..|...+ +.+- -++=.+.+..+ ..+.++..+.
T Consensus 97 ----D~T~YtLStag~dGFlklLPvy~dHiL~P~Ltd-eaf~TEVyHI~geg~d~GVVySEMq~~e----s~~~~im~~~ 167 (1022)
T KOG0961|consen 97 ----DHTAYTLSTAGSDGFLKLLPVYIDHILTPMLTD-EAFATEVYHITGEGNDAGVVYSEMQDHE----SEMESIMDRK 167 (1022)
T ss_pred ----CcceEEeecccccchHHHhHHHHHhhcCcccch-hhhhhheeeecCCCCccceeehhhhhhh----cccchhhhhh
Confidence 78888887765 589999999999999999986 3222 12212222222 3444566666
Q ss_pred HHhhcCh-hhhHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhc
Q 005848 511 MDAKLNT-AGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDM 589 (674)
Q Consensus 511 ~~~~~~~-~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~ 589 (674)
.+...+| .+.|....+|.. ..|..+ ..+.+++||+++|.+.||.|.|+|.++ .+++....+.+-..
T Consensus 168 ~~~~~yP~~sgY~~eTGG~~--knLR~l----------t~ekIR~yHK~~Y~~sN~cviVcG~v~-~d~lL~~m~~~~ne 234 (1022)
T KOG0961|consen 168 TKEVIYPPFSGYAVETGGRL--KNLREL----------TLEKIRDYHKKFYHLSNMCVIVCGMVD-HDQLLEIMNNVENE 234 (1022)
T ss_pred hheeecCCCCCceeccCCCh--hhHHHh----------hHHHHHHHHHHhccccceEEEEecCcC-HHHHHHHHHHHHhh
Confidence 6665554 445666677753 233333 358899999999999999999999998 68898887777665
Q ss_pred CCCCCCccccccccc----------CCCCcEEEEcC---cCeeEEEEecccCCCCCC-cchHHHHHHHHhcC---ccchH
Q 005848 590 LPTNSPVERVKWKAH----------LPSANEAIVIP---TQVNYVGKAANIFETGYK-LNGSAYVISKHISN---VWLWD 652 (674)
Q Consensus 590 l~~~~~~~~~~~~~~----------~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~-d~~al~vl~~iLg~---s~L~~ 652 (674)
++......+..|+.+ +.+....+..| ..+..+.++|.++++.|- ...|+.||-.+|++ +.+-+
T Consensus 235 ile~~s~vP~~~~rPf~~tn~~~~i~e~t~~tVefp~~Des~G~v~~aW~g~s~sD~~t~~a~~vL~dyls~savapf~~ 314 (1022)
T KOG0961|consen 235 ILEHMSTVPDHFPRPFSFTNALSDIKESTVHTVEFPTDDESRGAVEVAWFGHSPSDLETHSALHVLFDYLSNSAVAPFQK 314 (1022)
T ss_pred hhhccccCCCCCCCCcccccCcccCCccceeeeecCCcccccceEEEEEcCCCHHHhhhHHHHHHHHHHhcccccccccc
Confidence 544322112212211 01111123333 235578899999888774 46899999999983 34555
Q ss_pred HHhh-c-CCCCCccc
Q 005848 653 RVRV-S-GGAYGGFC 665 (674)
Q Consensus 653 ~IRe-k-G~aYg~~~ 665 (674)
..-| . -+|-++++
T Consensus 315 ~fVeieDP~assv~f 329 (1022)
T KOG0961|consen 315 DFVEIEDPLASSVSF 329 (1022)
T ss_pred ceEEecCccccceee
Confidence 5554 2 44444433
No 29
>KOG2019 consensus Metalloendoprotease HMP1 (insulinase superfamily) [General function prediction only; Posttranslational modification, protein turnover, chaperones]
Probab=98.16 E-value=1.5e-05 Score=84.74 Aligned_cols=271 Identities=12% Similarity=0.079 Sum_probs=163.7
Q ss_pred cCCceEEEeec-CCCcEEEEEEEeeCCCCCcccccChHHHHHHhhhcCCCCCCHHH-HHHHHh-hcccceEEeeeeccCC
Q 005848 366 INGVKVLQHDL-FTNDVLYTEVVFDMSSLKQELLPLIPLFCQSLKEMGTKDLSFVQ-LDQLIG-RKTGGISVYPFTSSIH 442 (674)
Q Consensus 366 ~nG~~v~~~~~-~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~l~~~Gt~~~~~~e-l~~~i~-~~~g~l~~~~~~~~~~ 442 (674)
.-|.+++.... ++|.+. ++.|.+.. .+--++++..+|-.-.|..++..++ +-+.+. .+.--+||++..
T Consensus 60 ~Tgae~lhl~reD~N~vF--sI~FrTpp---~dstGiPHILEHtvLCGS~KYPvrdPFfkmLnrSLatFmNAfT~p---- 130 (998)
T KOG2019|consen 60 KTGAEVLHLDREDENNVF--SIVFRTPP---KDSTGIPHILEHTVLCGSRKYPVRDPFFKMLNRSLATFMNAFTAP---- 130 (998)
T ss_pred CCCceeEeeccCCCCcee--EEEeecCC---CccCCCchhhhhheeeccCcCcccChHHHHHHHHHHHHHhhccCC----
Confidence 35888876655 566553 55665532 2334555555544448999887544 222222 222346777753
Q ss_pred CCCCCeeEEEEEEEEcc-ccHHHHHHHHHHHHhcCCCCchH------H--------------HH-HHHHHHHHhhhhhhc
Q 005848 443 GKEDPCCCMVVRGKAMA-GQAEDLFNLFNCVLQEVQLTDQQ------R--------------FK-QFVSQSKARMENRLR 500 (674)
Q Consensus 443 ~~~~~~~~~~~~~~~l~-~~l~~~l~ll~dil~~p~f~~~~------~--------------~~-~i~~~~~~~~~~~~~ 500 (674)
|+++|=+.+.. +++...+++.-|..+.|.....+ | ++ .|-.+++-.+ .
T Consensus 131 ------D~T~yPfattN~kDf~NL~dVYLDAtffPklr~~dF~QEGWr~Eh~dpsd~~SpivfkGVVfNEMKG~~----S 200 (998)
T KOG2019|consen 131 ------DYTFYPFATTNTKDFYNLRDVYLDATFFPKLRKLDFQQEGWRLEHNDPSDPISPIVFKGVVFNEMKGQY----S 200 (998)
T ss_pred ------CcceeecccCChHHHHHHHHHhhhcccchHHHhhhhhhhcceeecCCCCCCcccceeeeeeeecccccc----c
Confidence 78877666554 67888888777777766553111 1 11 1222333333 2
Q ss_pred cCcHHHHHHHHHhhcChhhhHHHHhchhhHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHH
Q 005848 501 GSGHGIAAARMDAKLNTAGWISEQMGGVSYLEFLQALEEKVDQDWAGISSSLEEIRRSFLSREGCLINMTADGKNLKNSE 580 (674)
Q Consensus 501 ~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~ 580 (674)
.+..+..+.+...+++++.|+-.-+|-+ .-+. +-.-++|++||+++|.|.|+.+..-|++. .++..
T Consensus 201 -~~~~if~~~~Qq~L~p~~tYgv~SGGDP--l~Ip----------dLt~eelk~FHr~~YHPSNAri~tYGn~P-l~~~l 266 (998)
T KOG2019|consen 201 -DPDYIFGMLFQQALFPENTYGVNSGGDP--LDIP----------DLTYEELKEFHRQHYHPSNARIFTYGNFP-LEDLL 266 (998)
T ss_pred -ChhHHHHHHHHHhhCccccccccCCCCc--ccCc----------cccHHHHHHHHHhccCCCcceeEeecCch-HHHHH
Confidence 3346666677778888877665555542 1111 22358999999999999999999999996 78888
Q ss_pred HHHHHHHhcCCCCCCcccccccccCCCCcEEE--------EcCcCeeEEEEecccCCCCC-CcchHHHHHHHHhc---Cc
Q 005848 581 RFVGKFLDMLPTNSPVERVKWKAHLPSANEAI--------VIPTQVNYVGKAANIFETGY-KLNGSAYVISKHIS---NV 648 (674)
Q Consensus 581 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~~~~~~~-~d~~al~vl~~iLg---~s 648 (674)
++++.-|....+.+...+..+........+++ ..|..|.-++..+-..+..| -+.++|.||+++|- +|
T Consensus 267 ~~l~e~~~~~sk~~~s~kv~~qk~f~kp~rvve~~p~d~~~~p~Kq~~~s~s~L~~~p~d~~etfaL~~L~~Ll~~gpsS 346 (998)
T KOG2019|consen 267 KQLEEDFSPFSKRELSSKVTFQKLFDKPRRVVEKGPADPGDLPKKQTKCSNSFLSNDPLDTYETFALKVLSHLLLDGPSS 346 (998)
T ss_pred HHHHHhhcccccccccCccccccccccCceeeeecCCCCCCCccceeEEEEEeecCCchhHHHHHHHHHHHHHhcCCCcc
Confidence 88887776554333222222222111111111 12334555666666555444 56899999999984 89
Q ss_pred cchHHHhhcCC--CCCcccccCC
Q 005848 649 WLWDRVRVSGG--AYGGFCDFDS 669 (674)
Q Consensus 649 ~L~~~IRekG~--aYg~~~~~~~ 669 (674)
.+++.+=|.|+ -.++.+.+..
T Consensus 347 p~yk~LiESGLGtEfsvnsG~~~ 369 (998)
T KOG2019|consen 347 PFYKALIESGLGTEFSVNSGYED 369 (998)
T ss_pred HHHHHHHHcCCCcccccCCCCCc
Confidence 99999999754 5677777764
No 30
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=93.89 E-value=0.16 Score=52.79 Aligned_cols=156 Identities=20% Similarity=0.297 Sum_probs=90.7
Q ss_pred EEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHHhhhhC
Q 005848 14 IVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFF 93 (674)
Q Consensus 14 ~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~d~~~~ 93 (674)
.||-.+-.+--|+||+|||.+-. ++. .+++ .||+|++.+..|-+.+...+....+..-+..|++.
T Consensus 27 FGFe~DI~~iLGiAHLLEHILIs----FD~----~~F~-------ANASTaRsYMSFWC~si~g~~~~DAvrtliSWFF~ 91 (590)
T PF03410_consen 27 FGFENDIGEILGIAHLLEHILIS----FDS----SKFL-------ANASTARSYMSFWCKSIRGRTYIDAVRTLISWFFD 91 (590)
T ss_pred cccccchHHHHhHHHHHHHHeee----cch----HHhh-------cccchhhhhhhhhhhhccCCChhHHHHHHHHHhhc
Confidence 46666677788999999999873 221 1222 68899999988875554445566677778888877
Q ss_pred CCCccccchhhhcccccccCCCCCCccchhHHHHHhhhccCChHHHHHHHHH------HHhCCCCCCCCCCCCCcCccCC
Q 005848 94 PKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVYSQPDNILGRAAQ------QALFPDNAYGVDSGGDPKVIPK 167 (674)
Q Consensus 94 P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~~~p~~~~~~~~~------~~~~~~~p~~~~~~G~~~~i~~ 167 (674)
-.-..+. |... .+.+-++..++ ++++..++. ..+.+|.-|. ||....+++
T Consensus 92 ~g~Lk~~--F~~~-----------------~i~~hikELEN--EYYFRnEvfHCmDvLtfL~gGDLYN---GGRi~ML~~ 147 (590)
T PF03410_consen 92 NGKLKDN--FSRS-----------------KIKNHIKELEN--EYYFRNEVFHCMDVLTFLGGGDLYN---GGRIDMLNN 147 (590)
T ss_pred CCccccc--ccHh-----------------HHHHHHHHHhh--hhhhhhhHHHHHHHHHHhcCCcccC---CchHHHHhh
Confidence 6555555 6543 33333333221 233333222 2344555553 444444544
Q ss_pred CCHHHHHH-HHHhhc--CCCCeEEEEEeCCCHHHHHHHhhhcccccccc
Q 005848 168 LTFEEFKE-FHRKYY--HPSNARIWFYGDDDPNERLRILSEASMNTIEF 213 (674)
Q Consensus 168 lt~~~l~~-f~~~~y--~p~n~~l~i~G~~d~~~~~~~i~~~~~~~~e~ 213 (674)
+ +++.. .++|+- ...|.+| +|-.+++ .++.+++ ..|+.+|.
T Consensus 148 l--~~i~~mL~~RM~~I~GpniVI-FVk~l~~-~~l~lL~-~TFGtLP~ 191 (590)
T PF03410_consen 148 L--NDIRNMLSNRMHRIIGPNIVI-FVKELNP-NILSLLS-NTFGTLPS 191 (590)
T ss_pred h--HHHHHHHHHHHHhhcCCcEEE-EEeccCH-HHHHHHH-HhcCCCCC
Confidence 4 34544 344443 2345544 4556874 5678884 88887764
No 31
>PHA03081 putative metalloprotease; Provisional
Probab=91.92 E-value=0.37 Score=50.25 Aligned_cols=160 Identities=18% Similarity=0.258 Sum_probs=93.1
Q ss_pred EEeeCCCCCCCChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceeecCCceEEEeecCCHhhHHHHHHHHHhhhhC
Q 005848 14 IVFRTPPKDSTGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFTYPDRTCYPVASTNTKDFYNLVDVYFDAVFF 93 (674)
Q Consensus 14 ~g~~~e~~~~~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t~~d~t~y~~~~~~~~~~~~~l~l~~d~~~~ 93 (674)
.|+-.+-.+--|+||+|||.+.. ++. ..++ .||+|++.+..+-+.+...+....+..-+..|++.
T Consensus 27 fgfe~di~~~lg~ahllehili~----fd~----~~f~-------anast~r~ymsfwc~sirg~~y~DAvrtliSWFF~ 91 (595)
T PHA03081 27 FGFENDIGEILGIAHLLEHILIS----FDS----SKFV-------ANASTARSYMSFWCKSIRGRSYIDAIRTLISWFFD 91 (595)
T ss_pred cccccchHHHHhHHHHHHHHeee----cch----HHhc-------ccchhhhhhHhHhhHhhcCCchHHHHHHHHHHhcc
Confidence 45666667788999999999863 111 1221 57889998888865444445566788889999999
Q ss_pred CCCccccchhhhcccccccCCCCCCccchhHHHHHhhhcc--CChHHHHHHHHHHHhCCCCCCCCCCCCCcCccCCCCHH
Q 005848 94 PKCVEDFQTFQQEGWHFKLDNPSEDITYKGVVFNEMKGVY--SQPDNILGRAAQQALFPDNAYGVDSGGDPKVIPKLTFE 171 (674)
Q Consensus 94 P~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~v~~e~~~~~--~~p~~~~~~~~~~~~~~~~p~~~~~~G~~~~i~~lt~~ 171 (674)
+.-..+. |.... ...-+.|+++.. -+-...+.+.+ ..+.+|.-|. +|....++++ +
T Consensus 92 ~~~Lr~~--F~~~~--------------ik~~ikELENEYYFRnEvfHCmDvL-TfL~gGDLYN---GGRi~ML~~l--~ 149 (595)
T PHA03081 92 NGKLKDN--FSLSK--------------IRNHIKELENEYYFRNEVFHCMDVL-TFLGGGDLYN---GGRIDMLDNL--N 149 (595)
T ss_pred CCccccc--cchhh--------------HHHHHHHHhhhhhhhhhhHHHHHHH-HHhcCCcccC---CchHHHHhhh--H
Confidence 9876777 76531 122223333211 12222333332 2344555553 4554555544 4
Q ss_pred HHHH-HHHhhc--CCCCeEEEEEeCCCHHHHHHHhhhcccccccc
Q 005848 172 EFKE-FHRKYY--HPSNARIWFYGDDDPNERLRILSEASMNTIEF 213 (674)
Q Consensus 172 ~l~~-f~~~~y--~p~n~~l~i~G~~d~~~~~~~i~~~~~~~~e~ 213 (674)
+++. .++|+- ..-|.+| +|-.++. .++.+++ +.|+.+|.
T Consensus 150 ~i~~~L~~RM~~I~GpniVI-FVk~ln~-~~l~lL~-~TFGtLP~ 191 (595)
T PHA03081 150 DVRDMLSNRMHRISGPNIVI-FVKELNP-NTLSLLN-NTFGTLPS 191 (595)
T ss_pred HHHHHHHHHHHhhcCCcEEE-EEeccCH-HHHHHHH-HhcCCCCC
Confidence 4555 344443 2345544 4556874 4678884 88887764
No 32
>PF03410 Peptidase_M44: Protein G1; InterPro: IPR005072 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M44 (clan ME). The active site residues for members of this family and family M16 occur in the motif HXXEHProtein. The type example is the vaccinia virus-type metalloendopeptidase G1 from vaccinia virus, it is a metalloendopeptidase expressed by many Poxviridae which appears to play a role in the maturation of viral proteins.; GO: 0004222 metalloendopeptidase activity, 0008270 zinc ion binding, 0019067 viral assembly, maturation, egress, and release
Probab=89.80 E-value=3.1 Score=43.75 Aligned_cols=64 Identities=11% Similarity=0.143 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCcccccccccCCCCcEEEEcCcC
Q 005848 548 ISSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHLPSANEAIVIPTQ 617 (674)
Q Consensus 548 ~~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (674)
+...|.+-.+++..| |++ ..+-..+ +.+..++++.||.||+.+...+ .+.......+++.+|+|
T Consensus 151 i~~mL~~RM~~I~Gp-niV-IFVk~l~--~~~l~lL~~TFGtLP~cP~~Ip--~~~~~~~~gKivMmPsP 214 (590)
T PF03410_consen 151 IRNMLSNRMHRIIGP-NIV-IFVKELN--PNILSLLSNTFGTLPSCPLTIP--PNAFSSIGGKIVMMPSP 214 (590)
T ss_pred HHHHHHHHHHhhcCC-cEE-EEEeccC--HHHHHHHHHhcCCCCCCccccc--CccccCCCCcEEEecCC
Confidence 334455444455554 544 4455665 4688999999999998764222 12222334456666665
No 33
>PHA03081 putative metalloprotease; Provisional
Probab=82.12 E-value=14 Score=39.14 Aligned_cols=63 Identities=8% Similarity=0.110 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHcCCCCcEEEEEeCCcchhhHHHHHHHHHhcCCCCCCcccccccccCCCCcEEEEcCcC
Q 005848 549 SSSLEEIRRSFLSREGCLINMTADGKNLKNSERFVGKFLDMLPTNSPVERVKWKAHLPSANEAIVIPTQ 617 (674)
Q Consensus 549 ~~~l~~~~~~~~~~~n~~v~v~Gd~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (674)
++.|.+-.+++..| |++ ..+-..+ +.+..++.+.||.||+.+...+ .+.......+++.+|+|
T Consensus 152 ~~~L~~RM~~I~Gp-niV-IFVk~ln--~~~l~lL~~TFGtLP~~P~~Ip--~~~~~~i~gKiVMmPsP 214 (595)
T PHA03081 152 RDMLSNRMHRISGP-NIV-IFVKELN--PNTLSLLNNTFGTLPSCPETIP--PPILVSIGGKIVMMPSP 214 (595)
T ss_pred HHHHHHHHHhhcCC-cEE-EEEeccC--HHHHHHHHHhcCCCCCCccccC--CCCccCcCCeEEEecCC
Confidence 34444444444444 544 4455665 4688999999999998764211 12112234455666665
No 34
>PF08367 M16C_assoc: Peptidase M16C associated; InterPro: IPR013578 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain appears in eukaryotes as well as bacteria and tends to be found near the C terminus of metalloproteases and related sequences belonging to MEROPS peptidase family M16 (subfamily M16C, clan ME). These include: eupitrilysin, falcilysin, PreP peptidase, CYM1 peptidase and subfamily M16C non-peptidase homologues.; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 2FGE_B 3S5I_A 3S5H_A 3S5M_A 3S5K_A.
Probab=56.17 E-value=26 Score=34.61 Aligned_cols=75 Identities=7% Similarity=0.002 Sum_probs=43.4
Q ss_pred CChhHHHHHHhccCCCCCCCCcHHHHHHhhccCcccceee----cC----CceE-EEe-ecCCHhhHHHHHHHHHhhhhC
Q 005848 24 TGIPHILEHSVLCGSRKYPLKEPFVELLKGSLNTFLNAFT----YP----DRTC-YPV-ASTNTKDFYNLVDVYFDAVFF 93 (674)
Q Consensus 24 ~G~ah~lehl~~~Gs~~~~~~~~~~~~l~~~~g~~~na~t----~~----d~t~-y~~-~~~~~~~~~~~l~l~~d~~~~ 93 (674)
.=++-+..-+.-.||++++..+ +...+....|+ +++.+ .. .... +.+ +.+..++++.+++++.+++++
T Consensus 109 ~yl~Ll~~ll~~lgT~~~sy~e-l~~~i~~~tGG-is~~~~~~~~~~~~~~~~~~l~is~k~L~~~~~~~~~ll~eil~~ 186 (248)
T PF08367_consen 109 PYLPLLTDLLGELGTKNYSYEE-LSNEIDLYTGG-ISFSIEVYTDYDDDDKYRPYLVISAKCLDEKLDEAFELLSEILTE 186 (248)
T ss_dssp CCHHHHHHHCCCS-BSSS-HHH-HHHHHHHHSSE-EEEEEEEEEEECTECCCEEEEEEEEEEEGGGHHHHHHHHHHHHHC
T ss_pred HhHHHHHHHHHhCCCCCCCHHH-HHHHHHHhCCC-eEEEeeeccCCCCccceeEEEEEEEEeHhhhHHHHHHHHHHHHhc
Confidence 3344444433344999999888 55555444332 43333 22 1111 222 347889999999999999999
Q ss_pred CCCcccc
Q 005848 94 PKCVEDF 100 (674)
Q Consensus 94 P~~~~~~ 100 (674)
|.|+..+
T Consensus 187 ~~f~d~~ 193 (248)
T PF08367_consen 187 TDFDDKE 193 (248)
T ss_dssp B-TT-HH
T ss_pred cCCCcHH
Confidence 9987765
No 35
>PF05838 Glyco_hydro_108: Glycosyl hydrolase 108; InterPro: IPR008565 This family consists of several hypothetical bacterial sequences as well as one viral sequence Q9MC03 from SWISSPROT, the function of this family is unknown.; PDB: 2NR7_A 2IKB_B 2IS5_A.
Probab=32.38 E-value=45 Score=26.56 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=18.1
Q ss_pred cCccCCCCHHHHHHHHHhhc-CCCCe
Q 005848 162 PKVIPKLTFEEFKEFHRKYY-HPSNA 186 (674)
Q Consensus 162 ~~~i~~lt~~~l~~f~~~~y-~p~n~ 186 (674)
..+|.+||.++..++|++.| .|-++
T Consensus 39 ~~d~~~Lt~~~A~~iY~~~yW~~~~~ 64 (83)
T PF05838_consen 39 AGDMRDLTRDQAKAIYRRDYWDPLGC 64 (83)
T ss_dssp -S-CCCS-HHHHHHCHHHHTTCCCTG
T ss_pred cCchhhcCHHHHHHHHHHHhcCccch
Confidence 78899999999999887666 77654
No 36
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=22.00 E-value=89 Score=28.76 Aligned_cols=43 Identities=12% Similarity=0.037 Sum_probs=33.9
Q ss_pred cCccCCCCHHHHHHHHHhhc-CCCCeEEEEEeCCCHHHHHHHhh
Q 005848 162 PKVIPKLTFEEFKEFHRKYY-HPSNARIWFYGDDDPNERLRILS 204 (674)
Q Consensus 162 ~~~i~~lt~~~l~~f~~~~y-~p~n~~l~i~G~~d~~~~~~~i~ 204 (674)
.=.+++++++++++..+..- .+.+..+.+.|.|+++.+.++.+
T Consensus 103 ~I~lD~~~~~~~~~~v~~l~~~~~~v~ie~SGGI~~~ni~~ya~ 146 (169)
T PF01729_consen 103 IIMLDNMSPEDLKEAVEELRELNPRVKIEASGGITLENIAEYAK 146 (169)
T ss_dssp EEEEES-CHHHHHHHHHHHHHHTTTSEEEEESSSSTTTHHHHHH
T ss_pred EEEecCcCHHHHHHHHHHHhhcCCcEEEEEECCCCHHHHHHHHh
Confidence 34478889999999887433 34559999999999999999985
No 37
>PF11460 DUF3007: Protein of unknown function (DUF3007); InterPro: IPR021562 This is a family of uncharacterised proteins found in bacteria and eukaryotes.
Probab=20.26 E-value=1.3e+02 Score=24.89 Aligned_cols=32 Identities=19% Similarity=0.183 Sum_probs=24.3
Q ss_pred chhhHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 005848 294 KASRDEAAEKEILAKVKSSMTKEDLAELARAT 325 (674)
Q Consensus 294 ~~~~~~~~~~~~l~~~~~~~s~eel~~~k~~~ 325 (674)
+.++..+...++++++-+.+++||++++.++.
T Consensus 71 Ye~a~~~~~~~~lqkRle~l~~eE~~~L~~ei 102 (104)
T PF11460_consen 71 YEEAVDQLTNEELQKRLEELSPEELEALQAEI 102 (104)
T ss_pred HHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHh
Confidence 33444566777888888889999999988754
Done!