STRING 9.05 
  fgenesh4_pg.C_LG_II002297 protein (Populus trichocarpa) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
fgenesh4_pg.C_LG_II002297
aminoacyl-tRNA ligase (EC-6.1.1.9) (951 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.VII.52.1
branched-chain amino acid aminotransferase (EC-2.6.1.42) (338 aa)
      0.919
estExt_Genewise1_v1.C_LG_II1818
hypothetical protein (319 aa)
      0.915
fgenesh4_pm.C_LG_IX000386
hypothetical protein (339 aa)
      0.914
gw1.1161.2.1
hypothetical protein (342 aa)
      0.911
eugene3.00180323
aminodeoxychorismate lyase (EC-4.1.3.38) (295 aa)
      0.910
estExt_fgenesh4_pm.C_LG_XI0275
aminodeoxychorismate lyase (EC-4.1.3.38) (339 aa)
       0.899
eugene3.00031274
aminoacyl-tRNA ligase (EC-6.1.1.2) (404 aa)
      0.799
gw1.28.724.1
histidine-tRNA ligase (EC-6.1.1.21) (441 aa)
      0.783
eugene3.114390001
Predicted protein (351 aa)
       0.756
gw1.VIII.2106.1
threonine-tRNA ligase (EC-6.1.1.3) (669 aa)
     0.748
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: medium (49%)
Permalink