Query 005851
Match_columns 674
No_of_seqs 490 out of 1973
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 09:09:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005851.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005851hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.9E-22 6.6E-27 193.7 16.5 138 10-148 6-150 (169)
2 4b93_B Ankyrin repeat domain-c 99.9 4.1E-23 1.4E-27 211.7 12.2 142 1-143 79-227 (269)
3 2rfm_A Putative ankyrin repeat 99.9 2E-22 7E-27 193.1 14.2 147 1-148 28-181 (192)
4 4gpm_A Engineered protein OR26 99.9 7.1E-22 2.4E-26 189.8 14.5 128 1-129 30-164 (169)
5 1yyh_A HN1;, notch 1, ankyrin 99.9 1.7E-21 5.8E-26 195.2 17.4 146 5-151 54-240 (253)
6 3hra_A Ankyrin repeat family p 99.9 2.3E-21 8E-26 185.6 16.4 148 1-149 32-193 (201)
7 1oy3_D Transcription factor in 99.9 1.7E-21 5.8E-26 195.1 15.1 84 60-144 151-235 (282)
8 4hbd_A KN motif and ankyrin re 99.9 1.9E-21 6.4E-26 199.1 14.8 148 1-149 104-265 (276)
9 3v31_A Ankyrin repeat family A 99.9 4.3E-21 1.5E-25 179.5 15.5 142 7-149 2-150 (167)
10 2f8y_A Notch homolog 1, transl 99.9 1.3E-20 4.3E-25 183.4 17.5 144 4-148 21-172 (223)
11 2rfa_A Transient receptor pote 99.8 9.2E-21 3.2E-25 185.8 16.2 136 8-144 3-164 (232)
12 2dzn_A Probable 26S proteasome 99.8 3.3E-21 1.1E-25 187.8 12.7 146 2-148 30-188 (228)
13 3aji_A 26S proteasome non-ATPa 99.8 8.7E-21 3E-25 185.5 15.4 146 2-148 34-186 (231)
14 1ikn_D Protein (I-kappa-B-alph 99.8 2.5E-21 8.4E-26 191.1 11.3 147 1-148 38-198 (236)
15 3aji_A 26S proteasome non-ATPa 99.8 1.4E-20 4.9E-25 183.9 16.4 136 8-144 6-149 (231)
16 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.3E-20 4.5E-25 177.4 15.2 143 5-148 11-160 (169)
17 3v30_A DNA-binding protein rfx 99.8 6.2E-21 2.1E-25 179.2 12.5 141 8-149 2-150 (172)
18 1awc_B Protein (GA binding pro 99.8 1.5E-20 5.1E-25 174.0 14.8 140 8-149 2-148 (153)
19 1oy3_D Transcription factor in 99.8 1E-20 3.6E-25 189.3 14.6 147 1-148 2-206 (282)
20 1yyh_A HN1;, notch 1, ankyrin 99.8 1.5E-20 5E-25 188.4 15.7 136 12-148 27-171 (253)
21 2dzn_A Probable 26S proteasome 99.8 2.3E-20 7.9E-25 181.8 16.6 140 8-148 2-154 (228)
22 1s70_B 130 kDa myosin-binding 99.8 1E-20 3.6E-25 192.0 14.4 76 67-142 198-273 (299)
23 1d9s_A Cyclin-dependent kinase 99.8 7.5E-21 2.6E-25 173.2 11.8 120 1-148 5-125 (136)
24 2etb_A Transient receptor pote 99.8 4.8E-21 1.6E-25 191.3 11.3 145 4-149 39-236 (256)
25 1k1a_A B-cell lymphoma 3-encod 99.8 3.7E-20 1.3E-24 181.5 17.3 143 2-145 40-194 (241)
26 1sw6_A Regulatory protein SWI6 99.8 5.4E-21 1.8E-25 200.3 12.1 142 1-143 123-325 (327)
27 1k1a_A B-cell lymphoma 3-encod 99.8 1.1E-20 3.8E-25 185.2 13.4 149 1-150 72-232 (241)
28 2f8y_A Notch homolog 1, transl 99.8 4.2E-20 1.4E-24 179.7 17.2 147 1-148 51-205 (223)
29 2rfa_A Transient receptor pote 99.8 2.7E-20 9.2E-25 182.5 15.9 128 1-128 30-185 (232)
30 3v30_A DNA-binding protein rfx 99.8 2.3E-20 7.7E-25 175.4 14.4 136 1-137 29-171 (172)
31 3b7b_A Euchromatic histone-lys 99.8 1.4E-20 4.7E-25 184.8 13.4 148 1-149 37-192 (237)
32 1bi7_B P16INK4A, MTS1, multipl 99.8 4.6E-21 1.6E-25 178.6 8.9 137 2-140 6-150 (156)
33 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.6E-20 5.6E-25 174.0 12.6 141 6-148 3-151 (162)
34 3c5r_A BARD-1, BRCA1-associate 99.8 9.6E-21 3.3E-25 172.1 10.4 121 3-150 5-125 (137)
35 3b7b_A Euchromatic histone-lys 99.8 6.9E-20 2.4E-24 179.8 16.5 147 1-148 4-158 (237)
36 2xai_A ASB-9, ankyrin repeat a 99.8 8.1E-20 2.8E-24 184.1 16.9 137 7-145 2-145 (261)
37 3aaa_C Myotrophin, protein V-1 99.8 2.8E-20 9.7E-25 166.2 11.3 116 4-146 3-118 (123)
38 3f6q_A Integrin-linked protein 99.8 6E-20 2E-24 174.2 14.0 141 6-147 3-151 (179)
39 3ljn_A Hypothetical protein; a 99.8 3.8E-20 1.3E-24 194.4 13.9 144 2-148 47-225 (364)
40 3twr_A Tankyrase-2; ankyrin re 99.8 2.4E-20 8.2E-25 174.1 10.4 139 4-143 4-150 (165)
41 3utm_A Tankyrase-1; tankyrase, 99.8 1.8E-19 6.3E-24 185.2 17.7 146 1-147 51-260 (351)
42 1n11_A Ankyrin; clathrin, BAND 99.8 1.1E-19 3.8E-24 195.3 16.3 143 2-145 239-388 (437)
43 3d9h_A CDNA FLJ77766, highly s 99.8 1.5E-19 5.3E-24 185.2 16.6 145 2-148 53-204 (285)
44 1bd8_A P19INK4D CDK4/6 inhibit 99.8 7.4E-20 2.5E-24 168.9 12.8 139 8-149 2-148 (156)
45 2xai_A ASB-9, ankyrin repeat a 99.8 2.1E-19 7.1E-24 181.1 16.0 145 1-148 29-180 (261)
46 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2.8E-19 9.5E-24 157.6 14.7 114 7-147 1-114 (126)
47 2jab_A H10-2-G3; HER2, darpin, 99.8 9.8E-20 3.3E-24 165.8 12.1 117 5-148 11-127 (136)
48 3d9h_A CDNA FLJ77766, highly s 99.8 2.4E-19 8.2E-24 183.8 16.4 145 1-148 85-236 (285)
49 3jxi_A Vanilloid receptor-rela 99.8 5.7E-20 1.9E-24 183.6 11.4 144 5-149 43-240 (260)
50 3utm_A Tankyrase-1; tankyrase, 99.8 2.1E-19 7E-24 184.8 15.2 53 1-53 84-136 (351)
51 3v31_A Ankyrin repeat family A 99.8 2.2E-19 7.5E-24 167.9 13.7 126 1-127 29-161 (167)
52 2etb_A Transient receptor pote 99.8 2.3E-19 7.9E-24 179.1 14.6 136 7-143 1-181 (256)
53 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.8E-19 6.2E-24 166.9 12.6 124 1-126 31-162 (162)
54 2y1l_E Darpin-8.4; hydrolase-i 99.8 3.8E-19 1.3E-23 167.4 14.5 123 1-124 40-169 (169)
55 3ljn_A Hypothetical protein; a 99.8 1.2E-19 4.1E-24 190.7 12.2 144 2-148 14-187 (364)
56 1wdy_A 2-5A-dependent ribonucl 99.8 8.1E-19 2.8E-23 174.7 17.6 146 2-148 66-233 (285)
57 1ikn_D Protein (I-kappa-B-alph 99.8 5.2E-20 1.8E-24 181.6 8.7 146 2-148 2-165 (236)
58 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.1E-19 1E-23 152.4 12.2 93 7-126 1-93 (93)
59 3kea_A K1L; tropism, ANK repea 99.8 1.2E-19 4E-24 186.4 11.1 144 1-148 24-175 (285)
60 2rfm_A Putative ankyrin repeat 99.8 5.1E-19 1.8E-23 169.3 14.6 123 1-124 61-190 (192)
61 1n11_A Ankyrin; clathrin, BAND 99.8 4.1E-19 1.4E-23 190.8 15.5 147 1-148 7-160 (437)
62 1s70_B 130 kDa myosin-binding 99.8 3.8E-19 1.3E-23 180.5 14.3 143 5-148 37-246 (299)
63 1ycs_B 53BP2, P53BP2; ankyrin 99.8 7.8E-20 2.7E-24 182.4 9.0 135 5-141 2-144 (239)
64 3f6q_A Integrin-linked protein 99.8 1.6E-19 5.5E-24 171.3 10.4 130 1-131 32-168 (179)
65 2pnn_A Transient receptor pote 99.8 2.1E-19 7.2E-24 181.4 11.9 145 4-148 50-247 (273)
66 2fo1_E LIN-12 protein; beta-ba 99.8 5.3E-19 1.8E-23 188.2 14.8 147 1-148 159-327 (373)
67 1wdy_A 2-5A-dependent ribonucl 99.8 1.8E-18 6E-23 172.3 16.9 144 2-146 32-194 (285)
68 3ehr_A Osteoclast-stimulating 99.8 9.7E-20 3.3E-24 178.6 7.6 119 4-149 69-188 (222)
69 4b93_B Ankyrin repeat domain-c 99.8 4.6E-19 1.6E-23 181.5 12.6 146 2-148 46-199 (269)
70 2l6b_A NR1C; ankyrin, consensu 99.8 2.8E-19 9.6E-24 157.6 9.0 109 3-138 4-112 (115)
71 3twr_A Tankyrase-2; ankyrin re 99.8 5.8E-19 2E-23 164.7 11.0 122 2-125 36-164 (165)
72 2fo1_E LIN-12 protein; beta-ba 99.8 8.2E-19 2.8E-23 186.8 13.3 148 1-149 192-361 (373)
73 2pnn_A Transient receptor pote 99.8 6.1E-19 2.1E-23 178.0 11.7 142 2-144 7-194 (273)
74 3hra_A Ankyrin repeat family p 99.8 3.2E-18 1.1E-22 163.7 15.8 140 5-145 2-151 (201)
75 1awc_B Protein (GA binding pro 99.8 2.2E-18 7.7E-23 159.3 14.0 116 4-120 30-152 (153)
76 3eu9_A Huntingtin-interacting 99.8 2.5E-18 8.5E-23 167.3 14.3 145 1-145 2-153 (240)
77 3kea_A K1L; tropism, ANK repea 99.8 6.3E-19 2.2E-23 180.9 10.2 140 7-148 61-209 (285)
78 3eu9_A Huntingtin-interacting 99.8 3.8E-18 1.3E-22 166.0 14.9 147 1-148 35-191 (240)
79 3deo_A Signal recognition part 99.8 9.1E-19 3.1E-23 167.5 9.7 112 5-144 41-153 (183)
80 4g8k_A 2-5A-dependent ribonucl 99.8 4E-18 1.4E-22 177.2 15.4 140 3-148 163-315 (337)
81 3t8k_A Uncharacterized protein 99.8 2.6E-19 9.1E-24 174.2 5.7 138 9-148 7-168 (186)
82 1bd8_A P19INK4D CDK4/6 inhibit 99.8 3.2E-18 1.1E-22 157.8 12.3 120 1-123 29-155 (156)
83 3jxi_A Vanilloid receptor-rela 99.8 1.5E-18 5.1E-23 173.3 10.7 140 4-144 1-186 (260)
84 2vge_A RELA-associated inhibit 99.8 3.5E-19 1.2E-23 178.0 6.0 112 3-141 16-128 (229)
85 4g8k_A 2-5A-dependent ribonucl 99.7 1.7E-17 5.9E-22 172.4 17.1 143 2-145 52-213 (337)
86 3ui2_A Signal recognition part 99.7 2E-18 7E-23 173.4 8.9 111 5-143 42-153 (244)
87 2jab_A H10-2-G3; HER2, darpin, 99.7 1.1E-17 3.8E-22 152.2 12.5 97 1-124 40-136 (136)
88 1ycs_B 53BP2, P53BP2; ankyrin 99.7 2.8E-18 9.6E-23 171.2 6.2 127 5-132 34-170 (239)
89 2b0o_E UPLC1; arfgap, structur 99.7 2.7E-17 9.1E-22 171.6 11.2 131 8-145 151-297 (301)
90 4hbd_A KN motif and ankyrin re 99.7 4.1E-17 1.4E-21 166.8 11.4 123 1-124 138-273 (276)
91 1dcq_A PYK2-associated protein 99.7 7.7E-17 2.6E-21 166.2 12.9 98 2-126 163-263 (278)
92 2zgd_A 3 repeat synthetic anky 99.7 6.9E-17 2.4E-21 142.6 10.4 92 2-120 18-109 (110)
93 3lvq_E ARF-GAP with SH3 domain 99.7 1.8E-16 6E-21 176.0 13.5 127 9-142 133-275 (497)
94 3jue_A Arfgap with coiled-coil 99.7 2.8E-16 9.4E-21 169.4 12.2 115 7-148 198-315 (368)
95 1d9s_A Cyclin-dependent kinase 99.7 1.8E-16 6.2E-21 144.1 9.0 90 57-148 2-92 (136)
96 1dcq_A PYK2-associated protein 99.6 1.4E-15 4.8E-20 156.7 13.9 119 9-148 131-252 (278)
97 3ehr_A Osteoclast-stimulating 99.6 1.7E-16 5.7E-21 155.5 6.5 107 1-133 99-205 (222)
98 3aaa_C Myotrophin, protein V-1 99.6 1.3E-15 4.3E-20 135.9 10.9 83 1-110 33-115 (123)
99 3c5r_A BARD-1, BRCA1-associate 99.6 2E-16 6.8E-21 143.5 4.1 97 1-124 36-132 (137)
100 2vge_A RELA-associated inhibit 99.6 3.3E-15 1.1E-19 149.2 12.7 82 67-148 20-101 (229)
101 3jue_A Arfgap with coiled-coil 99.6 2.4E-15 8.1E-20 162.1 12.5 99 1-126 226-326 (368)
102 3deo_A Signal recognition part 99.6 4.8E-16 1.6E-20 148.6 5.7 105 1-149 69-174 (183)
103 3ui2_A Signal recognition part 99.6 2.5E-15 8.5E-20 150.9 11.1 104 1-148 70-174 (244)
104 1sw6_A Regulatory protein SWI6 99.6 5E-16 1.7E-20 162.5 6.3 137 1-143 45-210 (327)
105 3t8k_A Uncharacterized protein 99.6 4.3E-16 1.5E-20 151.5 4.7 126 2-128 31-181 (186)
106 1n0r_A 4ANK, 4 ankyrin repeats 99.6 1.5E-14 5.2E-19 127.1 12.1 82 67-148 1-82 (126)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.6 9E-15 3.1E-19 124.5 10.1 82 67-148 1-82 (93)
108 1bi7_B P16INK4A, MTS1, multipl 99.6 3.6E-15 1.2E-19 138.6 8.3 110 37-148 8-125 (156)
109 2zgd_A 3 repeat synthetic anky 99.5 1.4E-13 4.9E-18 121.2 8.9 89 60-149 17-105 (110)
110 2aja_A Ankyrin repeat family p 99.4 2E-14 6.7E-19 155.3 2.6 119 5-148 89-213 (376)
111 3lvq_E ARF-GAP with SH3 domain 99.4 2.4E-13 8.2E-18 150.8 10.1 105 43-148 134-254 (497)
112 2l6b_A NR1C; ankyrin, consensu 99.4 2.3E-13 8E-18 119.5 6.9 86 62-148 4-89 (115)
113 2b0o_E UPLC1; arfgap, structur 99.4 5.1E-13 1.7E-17 139.2 10.0 104 44-148 154-273 (301)
114 2aja_A Ankyrin repeat family p 99.4 1.6E-14 5.3E-19 156.1 -5.1 112 3-146 123-237 (376)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=1.9e-22 Score=193.72 Aligned_cols=138 Identities=16% Similarity=0.168 Sum_probs=129.5
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHHHHHHcCCHH
Q 005851 10 SPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLHLAVRLRDPI 82 (674)
Q Consensus 10 TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLHlAv~~G~~e 82 (674)
++|+.||..|+.++|+.||++|++++..+..+.+++++|+..+... .|++++.+|. .|+||||+|+..|+.+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~-~g~TpLh~A~~~g~~~ 84 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLHHAAENGHKE 84 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTTCHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhcc-CCCCHHHHHHHcCCHH
Confidence 4799999999999999999999999999999999999999986633 2999999997 9999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 83 SAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 83 ~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
++++||++||+++.+|..|+||||+|+..|+.+++++|+++|++++.++..|+||+++|+.....+
T Consensus 85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~ 150 (169)
T 4gpm_A 85 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEE 150 (169)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999998766544
No 2
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.89 E-value=4.1e-23 Score=211.67 Aligned_cols=142 Identities=18% Similarity=0.150 Sum_probs=133.9
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLH 73 (674)
||..|.+|+||||+||..|+.+++++||..+++++.....+.+++++|+..+... .|+++|.+|. .|+||||
T Consensus 79 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~-~g~TpL~ 157 (269)
T 4b93_B 79 VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDL-SGNTPLI 157 (269)
T ss_dssp TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TCCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCC-CCCCHHH
Confidence 5788999999999999999999999999999999998889999999999886633 3899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHH
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASA 143 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL 143 (674)
+||..|+.++|++||++||+++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+||+++|+.
T Consensus 158 ~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 158 YACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp HHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCT
T ss_pred HHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999864
No 3
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.88 E-value=2e-22 Score=193.05 Aligned_cols=147 Identities=13% Similarity=0.103 Sum_probs=137.4
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
+|.+|.+|.||||+||..|+.+++++|++.+++++..+..+.+++|+|+..+...+ |++++.+|. .|+||||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 106 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDF-SGKTPLM 106 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TSCCHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHH
Confidence 36789999999999999999999999999999999888889999999999866332 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|......+
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 181 (192)
T 2rfm_A 107 WSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQE 181 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999876554
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.87 E-value=7.1e-22 Score=189.80 Aligned_cols=128 Identities=19% Similarity=0.222 Sum_probs=116.6
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
||.+|.+|+||||+|+..++.++++.||+.|++++..+..+.+++|+|+..+...+ |+++|.+|. .|+||||
T Consensus 30 vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~-~G~TpLh 108 (169)
T 4gpm_A 30 VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDS-DGRTPLH 108 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC-CCCCHHH
Confidence 57899999999999999999999999999999999999999999999999876332 999999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhh
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAW 129 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~ 129 (674)
+|+..|+.++|++||++||+++.+|..|+||||+|+..|+.+++++|+++|+++..
T Consensus 109 ~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 109 HAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999998763
No 5
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.87 E-value=1.7e-21 Score=195.20 Aligned_cols=146 Identities=19% Similarity=0.217 Sum_probs=82.0
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhc-------------------------------
Q 005851 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQA------------------------------- 53 (674)
Q Consensus 5 Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~------------------------------- 53 (674)
|.+|.||||+||..|+.+++++||++|++++..+..+.+++|+|+..+.
T Consensus 54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 133 (253)
T 1yyh_A 54 DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 133 (253)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Confidence 4555555555555555555555555555555555555555555554433
Q ss_pred ---ccc-------cccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 005851 54 ---DAV-------SAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARH 123 (674)
Q Consensus 54 ---d~i-------GAdIn~rD~p~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ 123 (674)
..+ |++++.+|. .|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 134 ~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 212 (253)
T 1yyh_A 134 LAVEGMLEDLINSHADVNAVDD-LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH 212 (253)
T ss_dssp HTCSSHHHHHHHTTCCTTCBCT-TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred cChHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 111 455555554 555566655555555555555555555555555555666666555555555555555
Q ss_pred CCChhhhhhcCCchHHHHHHhhhhhHHH
Q 005851 124 YQPLAWAKWCRRLPRIVASAARIRDFYM 151 (674)
Q Consensus 124 ga~i~~~d~~grtPl~LAaL~~~~DFy~ 151 (674)
|++++..+..|+||+++|...+..+...
T Consensus 213 ga~~~~~d~~g~tpl~~A~~~g~~~i~~ 240 (253)
T 1yyh_A 213 FANRDITDHMDRLPRDIAQERMHHDIVR 240 (253)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred CCCccccccCCCCHHHHHHHcCCHHHHH
Confidence 5555555555556666555555544433
No 6
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.86 E-value=2.3e-21 Score=185.59 Aligned_cols=148 Identities=16% Similarity=0.206 Sum_probs=134.7
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc--------ccccccccCCCCCCcHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA--------VSAVIDRRDVPGRETPL 72 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~--------iGAdIn~rD~p~G~TPL 72 (674)
+|..|.+|.||||+||..|+.+++++|+++|++++..+..+.+++|+|+..+... .+++++..|. .|.|||
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L 110 (201)
T 3hra_A 32 VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNR-YGGNAL 110 (201)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCT-TSCCSH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccC-CCCcHH
Confidence 4678899999999999999999999999999999998888999999999886632 2678999997 999999
Q ss_pred HHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCC-----HHHHHHHHHhCCChhhhhhcCCchHHHHHHhhh
Q 005851 73 HLAVRLRDPISAEILMAAG-ADWSLQNENGWSALQEAVCTRE-----ESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (674)
Q Consensus 73 HlAv~~G~~e~VklLL~~G-Advn~~N~~G~TPLh~A~~~G~-----~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~ 146 (674)
|+|+..|+.+++++|+++| ++++.+|..|+||||+|+..++ .+++++|+++|++++..+..|.||+++|+..+.
T Consensus 111 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 190 (201)
T 3hra_A 111 IPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGY 190 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC
Confidence 9999999999999999999 9999999999999999999998 899999999999999999999999999988766
Q ss_pred hhH
Q 005851 147 RDF 149 (674)
Q Consensus 147 ~DF 149 (674)
.+.
T Consensus 191 ~~~ 193 (201)
T 3hra_A 191 TEI 193 (201)
T ss_dssp HHH
T ss_pred HhH
Confidence 553
No 7
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.86 E-value=1.7e-21 Score=195.10 Aligned_cols=84 Identities=24% Similarity=0.256 Sum_probs=44.8
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchH
Q 005851 60 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNE-NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPR 138 (674)
Q Consensus 60 In~rD~p~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~-~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl 138 (674)
++.+|. .|.||||+|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.++..|.||+
T Consensus 151 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL 229 (282)
T 1oy3_D 151 LEAENY-DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPL 229 (282)
T ss_dssp TTCCCT-TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCcCC-CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHH
Confidence 444443 555555555555555555555555555555543 255555555555555555555555555555555555555
Q ss_pred HHHHHh
Q 005851 139 IVASAA 144 (674)
Q Consensus 139 ~LAaL~ 144 (674)
++|+..
T Consensus 230 ~~A~~~ 235 (282)
T 1oy3_D 230 GSALLR 235 (282)
T ss_dssp HHHHTS
T ss_pred HHHHHc
Confidence 555543
No 8
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.86 E-value=1.9e-21 Score=199.08 Aligned_cols=148 Identities=16% Similarity=0.167 Sum_probs=134.5
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCC-CCcccCCCCCchhHHHHH-----hhc-------ccccccccccCCCC
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLP-RLSKAGEVNTEDESLAAE-----LQA-------DAVSAVIDRRDVPG 67 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~ga-dln~~~e~~~~~l~lAa~-----~~~-------d~iGAdIn~rD~p~ 67 (674)
+|..|.+|.||||+||..|+.+++++||+.|+ +++..+..+.+++++|+. .+. ...|+.++..|. .
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~-~ 182 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQ-A 182 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTT-T
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCC-C
Confidence 47789999999999999999999999999998 899999999999999883 222 112778888886 8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-hCCChhhhhhcCCchHHHHHHhhh
Q 005851 68 RETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIAR-HYQPLAWAKWCRRLPRIVASAARI 146 (674)
Q Consensus 68 G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~-~ga~i~~~d~~grtPl~LAaL~~~ 146 (674)
|+||||+|+..|+.++|++||++||+++.+|..|+||||+|+..|+.+++++|++ .|++++..+..|.||+++|+..+.
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~ 262 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQ 262 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999999999999999999 899999999999999999998776
Q ss_pred hhH
Q 005851 147 RDF 149 (674)
Q Consensus 147 ~DF 149 (674)
.+.
T Consensus 263 ~~i 265 (276)
T 4hbd_A 263 SEI 265 (276)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 9
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.86 E-value=4.3e-21 Score=179.51 Aligned_cols=142 Identities=20% Similarity=0.058 Sum_probs=132.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHHHHHcC
Q 005851 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAVRLR 79 (674)
Q Consensus 7 ~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHlAv~~G 79 (674)
.|.||||+||..|+.++++.|++.+++++..+..+.+++|+|+..+...+ |++++..|. .|.||||+|+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK-GRESALSLACSKG 80 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHHT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC-CCCcHHHHHHHcC
Confidence 58999999999999999999999999999999999999999999866332 899999997 9999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhhH
Q 005851 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (674)
Q Consensus 80 ~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~DF 149 (674)
+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|......+.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~ 150 (167)
T 3v31_A 81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSV 150 (167)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998766553
No 10
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.85 E-value=1.3e-20 Score=183.38 Aligned_cols=144 Identities=21% Similarity=0.180 Sum_probs=115.7
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cc-cccccCCCCCCcHHHHH
Q 005851 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SA-VIDRRDVPGRETPLHLA 75 (674)
Q Consensus 4 ~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GA-dIn~rD~p~G~TPLHlA 75 (674)
.|.+|.||||+||..|+.+++++|+++|++++..+..+.+++|+|+..+...+ ++ +++..|. .|.||||+|
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A 99 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMH-DGTTPLILA 99 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCT-TCCCHHHHH
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCcHHHHH
Confidence 47788888888888888888888888888888887788888888888765322 33 6777776 788888888
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 76 VRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 76 v~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 100 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 172 (223)
T 2f8y_A 100 ARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYE 172 (223)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHH
Confidence 8888888888888888888888888888888888888888888888888888877788888888887655443
No 11
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.85 E-value=9.2e-21 Score=185.80 Aligned_cols=136 Identities=20% Similarity=0.173 Sum_probs=66.1
Q ss_pred CChHHHHHHHcCCHHHHHHHHHh-CCCCcccCCCCCchhHHHHHhhcccc-------cccc-----cccCCCCCCcHHHH
Q 005851 8 AHSPVHLAVARRDYAALRRIIAT-LPRLSKAGEVNTEDESLAAELQADAV-------SAVI-----DRRDVPGRETPLHL 74 (674)
Q Consensus 8 G~TPLH~AV~~G~~eiVk~LL~~-gadln~~~e~~~~~l~lAa~~~~d~i-------GAdI-----n~rD~p~G~TPLHl 74 (674)
|.||||+||..|+.++++.||+. +.+++..+..+.+++|+|+..+...+ |+++ +.+|. .|+||||+
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-~g~t~L~~ 81 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELY-EGQTALHI 81 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTT-TTCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCC-CCcCHHHH
Confidence 44555555555555555555544 44554444444555555554433111 3332 33343 45555555
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCC-------------CCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHH
Q 005851 75 AVRLRDPISAEILMAAGADWSLQNE-------------NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVA 141 (674)
Q Consensus 75 Av~~G~~e~VklLL~~GAdvn~~N~-------------~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LA 141 (674)
|+..|+.+++++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 5555555555555555555544433 355555555555555555555555555554455555555555
Q ss_pred HHh
Q 005851 142 SAA 144 (674)
Q Consensus 142 aL~ 144 (674)
+..
T Consensus 162 ~~~ 164 (232)
T 2rfa_A 162 ILQ 164 (232)
T ss_dssp HTC
T ss_pred HHc
Confidence 443
No 12
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.85 E-value=3.3e-21 Score=187.78 Aligned_cols=146 Identities=15% Similarity=0.128 Sum_probs=131.3
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhC--CCCcc-cCCCCCchhHHHHHhhcccc-------c--ccccccCCCCCC
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATL--PRLSK-AGEVNTEDESLAAELQADAV-------S--AVIDRRDVPGRE 69 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~g--adln~-~~e~~~~~l~lAa~~~~d~i-------G--AdIn~rD~p~G~ 69 (674)
+..|.+|.||||+|+..|+.+++++|++.+ ++++. .+..+.+++|+|+..+...+ | ++++..|. .|.
T Consensus 30 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~-~g~ 108 (228)
T 2dzn_A 30 LQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN-QGV 108 (228)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCT-TCC
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCc-CCC
Confidence 357899999999999999999999999999 55555 67788999999999866322 5 88899997 999
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhC-CChhhhhhcCCchHHHHHHhhhhh
Q 005851 70 TPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY-QPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 70 TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~g-a~i~~~d~~grtPl~LAaL~~~~D 148 (674)
||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++| ++++..+..|.||+++|+.....+
T Consensus 109 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~ 188 (228)
T 2dzn_A 109 TCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGD 188 (228)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999999999999999999999999999999999999 999999999999999999876554
No 13
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.85 E-value=8.7e-21 Score=185.49 Aligned_cols=146 Identities=14% Similarity=0.109 Sum_probs=128.4
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHH
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHL 74 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHl 74 (674)
+..|.+|.||||+|+..|+.+++++|++.|++++..+..+.+++|+|+..+...+ |++++.+|. .|.||||+
T Consensus 34 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~ 112 (231)
T 3aji_A 34 TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQ-NGCTPLHY 112 (231)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHH
T ss_pred hcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCC-CCCCHHHH
Confidence 4578889999999999999999999999999998888888899999998866332 888888887 89999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 75 Av~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 113 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 186 (231)
T 3aji_A 113 AASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVE 186 (231)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHH
Confidence 99999999999999999999999999999999999999999999999999999888889999999988765544
No 14
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.85 E-value=2.5e-21 Score=191.09 Aligned_cols=147 Identities=18% Similarity=0.138 Sum_probs=108.3
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cc------cccccCCCC
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SA------VIDRRDVPG 67 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GA------dIn~rD~p~ 67 (674)
+|..|.+|.||||+||..|+.+++++||++|++++..+..+.+++|+|+..+...+ ++ .++..|. .
T Consensus 38 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~-~ 116 (236)
T 1ikn_D 38 LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY-N 116 (236)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT-T
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCC-C
Confidence 35667777888888888888888888887777777777777777887777654221 22 2566665 7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhh
Q 005851 68 RETPLHLAVRLRDPISAEILMAAGADWSLQNE-NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (674)
Q Consensus 68 G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~-~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~ 146 (674)
|.||||+|+..|+.+++++|+++|++++.++. .|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.....
T Consensus 117 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 196 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS 196 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCc
Confidence 78888888888888888888888888877776 77888888888888888888887777777777777788877765544
Q ss_pred hh
Q 005851 147 RD 148 (674)
Q Consensus 147 ~D 148 (674)
.+
T Consensus 197 ~~ 198 (236)
T 1ikn_D 197 TR 198 (236)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 15
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.85 E-value=1.4e-20 Score=183.95 Aligned_cols=136 Identities=15% Similarity=0.126 Sum_probs=71.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCC-CcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHHHHHcC
Q 005851 8 AHSPVHLAVARRDYAALRRIIATLPR-LSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAVRLR 79 (674)
Q Consensus 8 G~TPLH~AV~~G~~eiVk~LL~~gad-ln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHlAv~~G 79 (674)
+.+|||+|+..|+.++++.|+..++. ++..+..+.+++|+|+..+...+ |++++.+|. .|+||||+|+..|
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 84 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD-AGWSPLHIAASAG 84 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCT-TSCCHHHHHHHHT
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCC-CCCCHHHHHHHcC
Confidence 44555555555555555555554433 22334444555555555443211 455555554 5555555555555
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHh
Q 005851 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAA 144 (674)
Q Consensus 80 ~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~ 144 (674)
+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..
T Consensus 85 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 149 (231)
T 3aji_A 85 XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK 149 (231)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 55555555555555555555555555555555555555555555555555555555555555543
No 16
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.84 E-value=1.3e-20 Score=177.44 Aligned_cols=143 Identities=16% Similarity=0.084 Sum_probs=131.7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHHHHH
Q 005851 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAVR 77 (674)
Q Consensus 5 Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHlAv~ 77 (674)
...+.+|||+||..|+.+++++|+++|++++..+..+.+++|+|+..+...+ |++++.+|. .|+||||+|+.
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 89 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDH-AGMTPLRLAAL 89 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHH
Confidence 4457899999999999999999999999999988899999999999866332 899999997 99999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 78 LRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 78 ~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
.|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|......+
T Consensus 90 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 160 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNED 160 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998766554
No 17
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.84 E-value=6.2e-21 Score=179.23 Aligned_cols=141 Identities=17% Similarity=0.057 Sum_probs=125.2
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCC-CcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHHHHHcC
Q 005851 8 AHSPVHLAVARRDYAALRRIIATLPR-LSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAVRLR 79 (674)
Q Consensus 8 G~TPLH~AV~~G~~eiVk~LL~~gad-ln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHlAv~~G 79 (674)
+.||||+||..|+.++++.||..++. ++..+..+.+++|+|+..+...+ |++++.+|. .|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAK-ERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcc-cCCCHHHHHHHCC
Confidence 46899999999999999999998877 66777888899999998866332 889999997 9999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhhH
Q 005851 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (674)
Q Consensus 80 ~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~DF 149 (674)
+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|......+.
T Consensus 81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 150 (172)
T 3v30_A 81 YTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKV 150 (172)
T ss_dssp CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998765553
No 18
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.84 E-value=1.5e-20 Score=173.99 Aligned_cols=140 Identities=16% Similarity=0.105 Sum_probs=128.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHHHHHHcCC
Q 005851 8 AHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLHLAVRLRD 80 (674)
Q Consensus 8 G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLHlAv~~G~ 80 (674)
+.+|||+|+..|+.++++.|++.|++++ .+..+.+++|+|+..+... .|++++.+|. .|+||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTK-VDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TCCCHHHHHHHHTC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCh
Confidence 4689999999999999999999999876 4667889999999987633 2899999997 99999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhhH
Q 005851 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (674)
Q Consensus 81 ~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~DF 149 (674)
.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|...+..+.
T Consensus 80 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i 148 (153)
T 1awc_B 80 ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDL 148 (153)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998766553
No 19
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.84 E-value=1e-20 Score=189.34 Aligned_cols=147 Identities=22% Similarity=0.261 Sum_probs=133.0
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCC---CcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCc
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPR---LSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRET 70 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gad---ln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~T 70 (674)
++.+|.+|+||||+||..|+.+++++||+.+++ ++..+..+.+++|+|+..+...+ |++++.+|. .|+|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t 80 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAER-GGHT 80 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TSCC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCC
Confidence 578999999999999999999999999999888 67788889999999999876332 999999997 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC-----------------------------------------------CCCCCCCCCC
Q 005851 71 PLHLAVRLRDPISAEILMAAGAD-----------------------------------------------WSLQNENGWS 103 (674)
Q Consensus 71 PLHlAv~~G~~e~VklLL~~GAd-----------------------------------------------vn~~N~~G~T 103 (674)
|||+|+..|+.+++++|+++|++ ++..+..|+|
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 160 (282)
T 1oy3_D 81 ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160 (282)
T ss_dssp HHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcC
Confidence 99999999999999999998876 6778899999
Q ss_pred HHHHHHHcCCHHHHHHHHHhCCChhhhhh-cCCchHHHHHHhhhhh
Q 005851 104 ALQEAVCTREESIAMIIARHYQPLAWAKW-CRRLPRIVASAARIRD 148 (674)
Q Consensus 104 PLh~A~~~G~~eIVklLL~~ga~i~~~d~-~grtPl~LAaL~~~~D 148 (674)
|||+|+..|+.+++++|+++|++++..+. .|.||+|+|+.....+
T Consensus 161 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~ 206 (282)
T 1oy3_D 161 PLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAAS 206 (282)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHH
Confidence 99999999999999999999999998775 4999999999766544
No 20
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.84 E-value=1.5e-20 Score=188.43 Aligned_cols=136 Identities=19% Similarity=0.073 Sum_probs=100.1
Q ss_pred HHHHHHcCCHHHHHHHHHhCCCCcc-cCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHHHHHcCCHHH
Q 005851 12 VHLAVARRDYAALRRIIATLPRLSK-AGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAVRLRDPIS 83 (674)
Q Consensus 12 LH~AV~~G~~eiVk~LL~~gadln~-~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHlAv~~G~~e~ 83 (674)
...++..++.++++.|+..|++++. .+..+.+++|+|+..+...+ |++++.+|. .|+||||+|+..|+.++
T Consensus 27 ~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~ 105 (253)
T 1yyh_A 27 GNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDN-MGRTPLHAAVSADAQGV 105 (253)
T ss_dssp -------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHTCHHH
T ss_pred cchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHcCCHHH
Confidence 3457788999999999999999865 46788999999999876332 899999997 99999999999999999
Q ss_pred HHHHHHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 84 AEILMAAGA-DWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 84 VklLL~~GA-dvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+++|+++|+ +++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 106 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 171 (253)
T 1yyh_A 106 FQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD 171 (253)
T ss_dssp HHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHH
T ss_pred HHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 999999998 89999999999999999999999999999999999999999999999998866544
No 21
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.84 E-value=2.3e-20 Score=181.76 Aligned_cols=140 Identities=15% Similarity=0.184 Sum_probs=101.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCCcc-cCCCCCchhHHHHHhhcccc-------c--ccccc-cCCCCCCcHHHHHH
Q 005851 8 AHSPVHLAVARRDYAALRRIIATLPRLSK-AGEVNTEDESLAAELQADAV-------S--AVIDR-RDVPGRETPLHLAV 76 (674)
Q Consensus 8 G~TPLH~AV~~G~~eiVk~LL~~gadln~-~~e~~~~~l~lAa~~~~d~i-------G--AdIn~-rD~p~G~TPLHlAv 76 (674)
|.||||+||..|+.++++.||+.++++.. .+..+.+++|+|+..+...+ | .+++. .|. .|+||||+|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-~g~t~L~~A~ 80 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDD-SGWTPFHIAC 80 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCT-TSCCHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCC-CCCCHHHHHH
Confidence 67788888888888888888877766554 56667777777777655222 4 45555 565 7778888888
Q ss_pred HcCCHHHHHHHHHcC--CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 77 RLRDPISAEILMAAG--ADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 77 ~~G~~e~VklLL~~G--Advn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
..|+.+++++|+++| ++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 81 ~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 81 SVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLK 154 (228)
T ss_dssp HHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHH
Confidence 888888888888777 777777777888888888878888888887777777777777778888777655443
No 22
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.84 E-value=1e-20 Score=192.04 Aligned_cols=76 Identities=20% Similarity=0.226 Sum_probs=51.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHH
Q 005851 67 GRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVAS 142 (674)
Q Consensus 67 ~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAa 142 (674)
.|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.
T Consensus 198 ~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 198 SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred CCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 3556666666666666666666666666666666666666666666666666666666666666666666666653
No 23
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.84 E-value=7.5e-21 Score=173.18 Aligned_cols=120 Identities=17% Similarity=0.146 Sum_probs=98.4
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCC
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~ 80 (674)
+|..|..|.||||+|+..|+.+++++||+++ ++++.+|. .|+||||+|+. |+
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g--------------------------~~~~~~~~-~g~t~L~~A~~-~~ 56 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAG--------------------------ADPNALNR-FGRRPIQVMMM-GS 56 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTT--------------------------CCTTCCCT-TCCTTTTTSTT-SC
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcC--------------------------CCcCCcCC-CCCCHHHHHHc-CC
Confidence 5788999999999999999999999999984 45666675 78888888888 88
Q ss_pred HHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 81 PISAEILMAAGADWSLQNEN-GWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 81 ~e~VklLL~~GAdvn~~N~~-G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
.+++++|+++|++++.+|.. |+||||+|+..|+.+++++|+++|++++..+..|.||+++|......+
T Consensus 57 ~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 125 (136)
T 1d9s_A 57 AQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRD 125 (136)
T ss_dssp HHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHH
Confidence 88888888888888888877 788888888888888888888888887777778888888877655444
No 24
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.84 E-value=4.8e-21 Score=191.28 Aligned_cols=145 Identities=14% Similarity=0.050 Sum_probs=129.8
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHHHhCCCCcccC-----------CCCCchhHHHHHhhcccc-------cccccc
Q 005851 4 FAKYAHSPVHLAVAR---RDYAALRRIIATLPRLSKAG-----------EVNTEDESLAAELQADAV-------SAVIDR 62 (674)
Q Consensus 4 ~Dk~G~TPLH~AV~~---G~~eiVk~LL~~gadln~~~-----------e~~~~~l~lAa~~~~d~i-------GAdIn~ 62 (674)
.|.+|.||||+||.. |+.+++++||+.|++++... ..+.+++|+|+..+...+ |++++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 789999999999999 99999999999988776332 568899999999876332 899999
Q ss_pred cCCCC-------------CCcHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCHHHHHHH--cCCHH-------HH
Q 005851 63 RDVPG-------------RETPLHLAVRLRDPISAEILMA---AGADWSLQNENGWSALQEAVC--TREES-------IA 117 (674)
Q Consensus 63 rD~p~-------------G~TPLHlAv~~G~~e~VklLL~---~GAdvn~~N~~G~TPLh~A~~--~G~~e-------IV 117 (674)
+|. . |.||||+|+..|+.+++++|++ +|++++.+|..|+||||+|+. .++.+ ++
T Consensus 119 ~~~-~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv 197 (256)
T 2etb_A 119 RAC-GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMY 197 (256)
T ss_dssp CCC-SGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred ccc-cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHH
Confidence 986 5 9999999999999999999999 999999999999999999999 78888 99
Q ss_pred HHHHHhCCCh-------hhhhhcCCchHHHHHHhhhhhH
Q 005851 118 MIIARHYQPL-------AWAKWCRRLPRIVASAARIRDF 149 (674)
Q Consensus 118 klLL~~ga~i-------~~~d~~grtPl~LAaL~~~~DF 149 (674)
++|+++|+++ +.++..|.||+++|+.....+.
T Consensus 198 ~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 198 DGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp HHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 9999999999 8889999999999998765543
No 25
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.84 E-value=3.7e-20 Score=181.48 Aligned_cols=143 Identities=20% Similarity=0.236 Sum_probs=76.2
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cc----cccccCCCCCCc
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SA----VIDRRDVPGRET 70 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GA----dIn~rD~p~G~T 70 (674)
|..|..|.||||+|+..|+.+++++|++.|++++..+..+.+++|+|+..+...+ ++ +++..|. .|.|
T Consensus 40 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~g~t 118 (241)
T 1k1a_A 40 DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNY-DGLT 118 (241)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCT-TSCC
T ss_pred CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCc-CCCc
Confidence 3444555555555555555555555555555555544455555555555433111 22 4455554 5555
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhh
Q 005851 71 PLHLAVRLRDPISAEILMAAGADWSLQN-ENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAAR 145 (674)
Q Consensus 71 PLHlAv~~G~~e~VklLL~~GAdvn~~N-~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~ 145 (674)
|||+|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 119 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 119 ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRG 194 (241)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 5555555555555555555555555555 45555555555555555555555555555555555555555555443
No 26
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.84 E-value=5.4e-21 Score=200.31 Aligned_cols=142 Identities=12% Similarity=0.012 Sum_probs=128.8
Q ss_pred CCc-CCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhc----ccc-------cccccccCCCCC
Q 005851 1 MED-FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQA----DAV-------SAVIDRRDVPGR 68 (674)
Q Consensus 1 IN~-~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~----d~i-------GAdIn~rD~p~G 68 (674)
+|. .|.+|+||||+||..|+.+++++||++|++++..+..+.+++|+|+..+. ..+ .++++.+|. .|
T Consensus 123 vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~-~g 201 (327)
T 1sw6_A 123 LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDS-MN 201 (327)
T ss_dssp SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECT-TC
T ss_pred cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCC-CC
Confidence 456 79999999999999999999999999999999999999999999999744 111 478999997 99
Q ss_pred CcHHHHHHH----cCCHHHHHHHHHcCC---------------------------------------------CCCCCCC
Q 005851 69 ETPLHLAVR----LRDPISAEILMAAGA---------------------------------------------DWSLQNE 99 (674)
Q Consensus 69 ~TPLHlAv~----~G~~e~VklLL~~GA---------------------------------------------dvn~~N~ 99 (674)
+||||+|+. .|+.+++++|++.++ +++.+|.
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~ 281 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDS 281 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCT
T ss_pred CCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCC
Confidence 999999999 899999999998743 5788899
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHH
Q 005851 100 NGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASA 143 (674)
Q Consensus 100 ~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL 143 (674)
.|+||||+|+..|+.+++++|+++|++++.++..|+||+++|+.
T Consensus 282 ~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 282 NGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 99999999999999999999999999999999999999998753
No 27
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.84 E-value=1.1e-20 Score=185.19 Aligned_cols=149 Identities=21% Similarity=0.210 Sum_probs=136.1
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCC----CCcccCCCCCchhHHHHHhhccc-------ccccccccC-CCCC
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLP----RLSKAGEVNTEDESLAAELQADA-------VSAVIDRRD-VPGR 68 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~ga----dln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD-~p~G 68 (674)
++..|.+|.||||+|+..|+.++++.|++.++ +++..+..+.+++|+|+..+... .|++++..+ . .|
T Consensus 72 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-~g 150 (241)
T 1k1a_A 72 PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIK-SG 150 (241)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-TC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccccccc-CC
Confidence 35678999999999999999999999999988 77777888899999999886632 288999988 5 89
Q ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 69 ETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 69 ~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||+++|...+..+
T Consensus 151 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~ 230 (241)
T 1k1a_A 151 RSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVID 230 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777666
Q ss_pred HH
Q 005851 149 FY 150 (674)
Q Consensus 149 Fy 150 (674)
..
T Consensus 231 i~ 232 (241)
T 1k1a_A 231 IL 232 (241)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 28
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.84 E-value=4.2e-20 Score=179.72 Aligned_cols=147 Identities=22% Similarity=0.223 Sum_probs=135.8
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCC-CCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLP-RLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPL 72 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~ga-dln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPL 72 (674)
++..|.+|.||||+|+..|+.+++++|++.++ +++..+..+.+++|+|+..+... .|++++.+|. .|+|||
T Consensus 51 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L 129 (223)
T 2f8y_A 51 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDD-LGKSAL 129 (223)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TSCBHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCC-CCCcHH
Confidence 46788999999999999999999999999987 77778888999999999986633 2899999997 999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 73 HLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 73 HlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
|+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|......+
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~ 205 (223)
T 2f8y_A 130 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHD 205 (223)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999876554
No 29
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.84 E-value=2.7e-20 Score=182.48 Aligned_cols=128 Identities=16% Similarity=0.157 Sum_probs=113.3
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCC-----cccCCCCCchhHHHHHhhcccc-------cccccccCCC--
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRL-----SKAGEVNTEDESLAAELQADAV-------SAVIDRRDVP-- 66 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadl-----n~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p-- 66 (674)
+|..|.+|+||||+|+..|+.+++++|++.++++ +..+..+.+++|+|+..+...+ |++++.++..
T Consensus 30 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 109 (232)
T 2rfa_A 30 VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSV 109 (232)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcc
Confidence 4678999999999999999999999999999886 4455678899999999866332 8888887631
Q ss_pred ----------CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHH----HHHHHhCCChh
Q 005851 67 ----------GRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIA----MIIARHYQPLA 128 (674)
Q Consensus 67 ----------~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIV----klLL~~ga~i~ 128 (674)
.|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++ ++|+++|++..
T Consensus 110 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 110 FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred eeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 599999999999999999999999999999999999999999999999988 89999988754
No 30
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.84 E-value=2.3e-20 Score=175.41 Aligned_cols=136 Identities=21% Similarity=0.188 Sum_probs=121.0
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLH 73 (674)
++..|.+|.||||+||..|+.+++++||++|++++..+..+.+++|+|+..+... .|++++.+|. .|+||||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 107 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDW-NGGTPLL 107 (172)
T ss_dssp GGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCT-TSCCHHH
T ss_pred ccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCC-CCCCHHH
Confidence 3567899999999999999999999999999999998899999999999986633 2899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCch
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLP 137 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtP 137 (674)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++++....+..+.+|
T Consensus 108 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 108 YAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred HHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999888777777776
No 31
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.83 E-value=1.4e-20 Score=184.81 Aligned_cols=148 Identities=17% Similarity=0.151 Sum_probs=130.4
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------c-ccccccCCCCCCcHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------S-AVIDRRDVPGRETPL 72 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------G-AdIn~rD~p~G~TPL 72 (674)
++..|.+|.||||+|+..|+.+++++|+++|++++..+..+.+++|+|+..+...+ + ++++..|. .|.|||
T Consensus 37 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-~g~t~L 115 (237)
T 3b7b_A 37 IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDD-GGWTPM 115 (237)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCT-TSCCHH
T ss_pred cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCC-CCCCHH
Confidence 46678899999999999999999999999999998888888899999998866332 4 78888886 899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhhH
Q 005851 73 HLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (674)
Q Consensus 73 HlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~DF 149 (674)
|+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+.
T Consensus 116 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 192 (237)
T 3b7b_A 116 IWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDC 192 (237)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999988665543
No 32
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.83 E-value=4.6e-21 Score=178.62 Aligned_cols=137 Identities=14% Similarity=0.022 Sum_probs=107.6
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhc-c------cccccccccCCCCCCc-HHH
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQA-D------AVSAVIDRRDVPGRET-PLH 73 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~-d------~iGAdIn~rD~p~G~T-PLH 73 (674)
+..+..|.||||+||..|+.+++++||++|++++..+..+.+++|+|+ .+. . ..|++++.+|. .|+| |||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~-~g~ttpL~ 83 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADP-ATLTRPVH 83 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCT-TTCCCHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCC-CCCcHHHH
Confidence 456788999999999999999999999999999998888999999885 333 1 22899999997 8999 999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHH
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIV 140 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~L 140 (674)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.+|..-
T Consensus 84 ~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 84 DAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp HHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred HHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence 9999999999999999999999999999999999999999999999999999999998888888763
No 33
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.83 E-value=1.6e-20 Score=174.00 Aligned_cols=141 Identities=13% Similarity=0.054 Sum_probs=128.1
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHHHHHHc
Q 005851 6 KYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLHLAVRL 78 (674)
Q Consensus 6 k~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLHlAv~~ 78 (674)
....||||+|+..|+.++++.||+.+++++..+..+.+++|+|+. +... .|++++.+|. .|+||||+|+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~ 80 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDR-TGFAVIHDAARA 80 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCC-CCCCHHHHHHHc
Confidence 456799999999999999999999999999998999999999887 4422 2899999997 999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCC-hhhhhhcCCchHHHHHHhhhhh
Q 005851 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP-LAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 79 G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~-i~~~d~~grtPl~LAaL~~~~D 148 (674)
|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++ ++..+..|.||+++|+.....+
T Consensus 81 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNE 151 (162)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999998 5888899999999999876554
No 34
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.83 E-value=9.6e-21 Score=172.08 Aligned_cols=121 Identities=14% Similarity=0.087 Sum_probs=112.3
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHH
Q 005851 3 DFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPI 82 (674)
Q Consensus 3 ~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e 82 (674)
..|.+|.||||+||..|+.+++++||+. |++++.+|. .|+||||+|+..|+.+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~~~~~ 57 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQN--------------------------GSDPNVKDH-AGWTPLHEACNHGHLK 57 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHT--------------------------TCCSCCCCT-TSCCHHHHHHHTTCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCcCCC-CCCCHHHHHHHcCCHH
Confidence 4688999999999999999999999998 556788886 9999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhhHH
Q 005851 83 SAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDFY 150 (674)
Q Consensus 83 ~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~DFy 150 (674)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|......+++
T Consensus 58 ~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l 125 (137)
T 3c5r_A 58 VVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLL 125 (137)
T ss_dssp HHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHH
T ss_pred HHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998876665543
No 35
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.83 E-value=6.9e-20 Score=179.80 Aligned_cols=147 Identities=17% Similarity=0.163 Sum_probs=136.4
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLH 73 (674)
++..|.+|.||||+||..|+.+++++|+++|++++..+..+.+++|+|+..+... .|++++.+|. .|.||||
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 82 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDA-EGSTCLH 82 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCT-TSCCHHH
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCC-CCCcHHH
Confidence 4678999999999999999999999999999999998888999999999986633 2889999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 74 LAVRLRDPISAEILMAAG-ADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~G-Advn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+|+..|+.+++++|+++| ++++..+..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 83 ~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 158 (237)
T 3b7b_A 83 LAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVD 158 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHH
T ss_pred HHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHH
Confidence 999999999999999999 899999999999999999999999999999999999999999999999999866544
No 36
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.83 E-value=8.1e-20 Score=184.10 Aligned_cols=137 Identities=15% Similarity=0.026 Sum_probs=75.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHHHHHcC
Q 005851 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAVRLR 79 (674)
Q Consensus 7 ~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHlAv~~G 79 (674)
.|+||||+||..|+.++++.|++.|++++..+..+.+++|+|+..+...+ |++++.+|. .|+||||+|+..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 80 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFNACVSG 80 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcC
Confidence 35555555555555555555555555555555555555555555543211 555555554 5555555555555
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhh
Q 005851 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAAR 145 (674)
Q Consensus 80 ~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~ 145 (674)
+.+++++|+++|++++.. ..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+...
T Consensus 81 ~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 145 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ 145 (261)
T ss_dssp CHHHHHHHHHTTCCSSCS-CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT
T ss_pred CHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhC
Confidence 555555555555555532 23555555555555555555555555555555555555555555433
No 37
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.82 E-value=2.8e-20 Score=166.20 Aligned_cols=116 Identities=16% Similarity=0.131 Sum_probs=105.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHHH
Q 005851 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPIS 83 (674)
Q Consensus 4 ~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e~ 83 (674)
.+..|.||||+|+..|+.++++.|++. |++++.+|. .|+||||+|+..|+.++
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~--------------------------~~~~~~~~~-~g~t~L~~A~~~~~~~~ 55 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAK--------------------------GEDVNRTLE-GGRKPLHYAADCGQLEI 55 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHT--------------------------TCCTTSCCT-TSSCHHHHHHHTTCHHH
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHc--------------------------CCCcCccCC-CCCcHHHHHHHcCCHHH
Confidence 356789999999999999999999998 456788886 99999999999999999
Q ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhh
Q 005851 84 AEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (674)
Q Consensus 84 VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~ 146 (674)
+++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|.....
T Consensus 56 v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 56 LEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp HHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHH
T ss_pred HHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999854443
No 38
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.82 E-value=6e-20 Score=174.25 Aligned_cols=141 Identities=18% Similarity=0.117 Sum_probs=125.3
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHh-CCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHHHHHH
Q 005851 6 KYAHSPVHLAVARRDYAALRRIIAT-LPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLHLAVR 77 (674)
Q Consensus 6 k~G~TPLH~AV~~G~~eiVk~LL~~-gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLHlAv~ 77 (674)
..+.++||.||..|+.++++.||+. +.+++..+..+.+++|+|+..+... .|++++.+|. .|+||||+|+.
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~ 81 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNR-GDDTPLHLAAS 81 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHH
Confidence 4678999999999999999999998 4567778888899999999986633 2899999997 99999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhh
Q 005851 78 LRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIR 147 (674)
Q Consensus 78 ~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~ 147 (674)
.|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|......
T Consensus 82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~ 151 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRE 151 (179)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHH
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998765443
No 39
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.82 E-value=3.8e-20 Score=194.44 Aligned_cols=144 Identities=15% Similarity=0.072 Sum_probs=106.8
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-----------cccccc--------
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-----------SAVIDR-------- 62 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-----------GAdIn~-------- 62 (674)
|..|.+|.||||+||..|+.+++++||+++++++. ..+.+++|+|+..+...+ |++++.
T Consensus 47 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 124 (364)
T 3ljn_A 47 TIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDER 124 (364)
T ss_dssp TCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCC
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchH
Confidence 55666777777777777777777777777664443 234556666665544211 444444
Q ss_pred ---------cCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCC-----
Q 005851 63 ---------RDVPGRETPLHLAVRLR--DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP----- 126 (674)
Q Consensus 63 ---------rD~p~G~TPLHlAv~~G--~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~----- 126 (674)
+|. .|.||||+|+..| +.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++
T Consensus 125 ~~~~~~~~~~~~-~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 203 (364)
T 3ljn_A 125 EVNEIGSHVKHC-KGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLR 203 (364)
T ss_dssp CEEEETTEEEEE-SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCC
T ss_pred hhhhhccccCCC-CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccc
Confidence 775 7888888888888 88888888888888888888888888888888888888888888888
Q ss_pred hhhhhhcCCchHHHHHHhhhhh
Q 005851 127 LAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 127 i~~~d~~grtPl~LAaL~~~~D 148 (674)
++..+..|.||+|+|+.....+
T Consensus 204 ~~~~~~~g~t~L~~A~~~g~~~ 225 (364)
T 3ljn_A 204 LDYANKQGNSHLHWAILINWED 225 (364)
T ss_dssp TTCCCTTCCCTTHHHHTTTCHH
T ss_pred ccccCCCCCcHHHHHHHcCCHH
Confidence 8888888888888888765544
No 40
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.82 E-value=2.4e-20 Score=174.07 Aligned_cols=139 Identities=17% Similarity=0.120 Sum_probs=123.5
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhC-CCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHHHH
Q 005851 4 FAKYAHSPVHLAVARRDYAALRRIIATL-PRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLHLA 75 (674)
Q Consensus 4 ~Dk~G~TPLH~AV~~G~~eiVk~LL~~g-adln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLHlA 75 (674)
.|..|.||||+|+..|+.++++.|++.+ .+++..+..+.+++|+|+..+... .|++++.+|. .|+||||+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A 82 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDK-GGLVPLHNA 82 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCC-CCCCHHHHH
Confidence 4677899999999999999999999854 455556666789999999987633 2899999997 999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHH
Q 005851 76 VRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASA 143 (674)
Q Consensus 76 v~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL 143 (674)
+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++.++..|.||++++..
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 83 CSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT
T ss_pred HHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999998654
No 41
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.82 E-value=1.8e-19 Score=185.19 Aligned_cols=146 Identities=19% Similarity=0.151 Sum_probs=110.1
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
+|..|.+|.||||+||..|+.+++++||++|++++..+..+.+++|+|+..+...+ |++++..|. .|.||||
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~-~g~t~L~ 129 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDL-WQFTPLH 129 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHH
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCC-CCCCHHH
Confidence 35678889999999999999999999999998888888888889999888766332 888888886 8889999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC------------------------------------------------------C
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQN------------------------------------------------------E 99 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N------------------------------------------------------~ 99 (674)
+|+..|+.+++++|+++|++++..+ .
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 209 (351)
T 3utm_A 130 EAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQ 209 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTT
T ss_pred HHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCC
Confidence 9998888888888888887766543 3
Q ss_pred CCCCHHHHHHHc---CCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhh
Q 005851 100 NGWSALQEAVCT---REESIAMIIARHYQPLAWAKWCRRLPRIVASAARIR 147 (674)
Q Consensus 100 ~G~TPLh~A~~~---G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~ 147 (674)
.|+||||+|+.. +..+++++|+++|++++..+..|.||+|+|+.....
T Consensus 210 ~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~ 260 (351)
T 3utm_A 210 SHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHN 260 (351)
T ss_dssp TCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred CCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCH
Confidence 445666666666 335666666666666666666666666666654433
No 42
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.82 E-value=1.1e-19 Score=195.28 Aligned_cols=143 Identities=16% Similarity=0.148 Sum_probs=97.4
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHH
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHL 74 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHl 74 (674)
|..|..|.||||+|+..|+.+++++|++++++++..+..+.+++|+|+..+...+ |++++.+|. .|+||||+
T Consensus 239 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~ 317 (437)
T 1n11_A 239 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTR-MGYTPLHV 317 (437)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCS-SCCCHHHH
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCC-CCCCHHHH
Confidence 4455666666666666666666666666666666666666666666666544222 666677775 67777777
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhh
Q 005851 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAAR 145 (674)
Q Consensus 75 Av~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~ 145 (674)
|+..|+.++|++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|....
T Consensus 318 A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g 388 (437)
T 1n11_A 318 ASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLG 388 (437)
T ss_dssp HHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTT
T ss_pred HHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 77777777777777777777777777777777777777777777777777777766677777777766544
No 43
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.82 E-value=1.5e-19 Score=185.20 Aligned_cols=145 Identities=16% Similarity=0.019 Sum_probs=133.0
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHH
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHL 74 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHl 74 (674)
+..|.+|+||||+||..|+.++++.||+.|++++..+..+.+++|+|+..+...+ |++++.+|. .|+||||+
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~t~L~~ 131 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA-DWHTPLFN 131 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT-TCCCHHHH
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC-CCCCHHHH
Confidence 5678899999999999999999999999999999999999999999999876332 899999997 99999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 75 Av~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
|+..|+.+++++|+++|++++..+ .|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 132 A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 204 (285)
T 3d9h_A 132 ACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA 204 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH
T ss_pred HHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 999999999999999999998655 4999999999999999999999999999999999999999999866554
No 44
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.82 E-value=7.4e-20 Score=168.86 Aligned_cols=139 Identities=19% Similarity=0.188 Sum_probs=124.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHHh-CCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHHHHHHcC
Q 005851 8 AHSPVHLAVARRDYAALRRIIAT-LPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLHLAVRLR 79 (674)
Q Consensus 8 G~TPLH~AV~~G~~eiVk~LL~~-gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLHlAv~~G 79 (674)
|.||||+||..|+.++++.||+. +.+++..+..+.+++|+ +..+... .|++++.+|. .|+||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDT-SGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCC-CCCCHHHHHHHcC
Confidence 56899999999999999999998 23777788889999999 6654422 2899999997 9999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhhH
Q 005851 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (674)
Q Consensus 80 ~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~DF 149 (674)
+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++ ++++..+..|.||+++|+.....+.
T Consensus 80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~ 148 (156)
T 1bd8_A 80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDL 148 (156)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHH
T ss_pred cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 99999999999999999999999999999999999999999999 9999999999999999998765553
No 45
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.81 E-value=2.1e-19 Score=181.12 Aligned_cols=145 Identities=11% Similarity=0.025 Sum_probs=132.6
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
+|..|.+|.||||+||..|+.+++++|+++|++++..+..+.+++|+|+..+...+ |++++..+ .|.||||
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~ 106 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIH 106 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTCCHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC--CCCCHHH
Confidence 46789999999999999999999999999999999999999999999999876332 78887654 5999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++. +..|.||+|+|+.....+
T Consensus 107 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~ 180 (261)
T 2xai_A 107 EAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEE 180 (261)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHH
T ss_pred HHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999999985 788999999999866544
No 46
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.81 E-value=2.8e-19 Score=157.55 Aligned_cols=114 Identities=21% Similarity=0.275 Sum_probs=86.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHHHHHH
Q 005851 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEI 86 (674)
Q Consensus 7 ~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e~Vkl 86 (674)
+|.||||+|+..|+.+++++|+++++ +++..|. .|.||||+|+..|+.+++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~--------------------------~~~~~~~-~g~t~L~~A~~~~~~~~~~~ 53 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA--------------------------DVNAKDK-NGRTPLHLAARNGHLEVVKL 53 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC--------------------------CTTCCCT-TSCCHHHHHHHHTCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC--------------------------CCCCcCC-CCCcHHHHHHHcCcHHHHHH
Confidence 58999999999999999999999954 4555564 67777777777777777777
Q ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhh
Q 005851 87 LMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIR 147 (674)
Q Consensus 87 LL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~ 147 (674)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|......
T Consensus 54 Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 114 (126)
T 1n0r_A 54 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 114 (126)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcH
Confidence 7777777777777777777777777777777777777777776667777777777665443
No 47
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.81 E-value=9.8e-20 Score=165.80 Aligned_cols=117 Identities=19% Similarity=0.148 Sum_probs=106.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 005851 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (674)
Q Consensus 5 Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e~V 84 (674)
...|.||||+||..|+.+++++|+++ |++++.+|. .|+||||+|+..|+.+++
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~~~~~~v 63 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMAN--------------------------GADVNAKDE-YGLTPLYLATAHGHLEIV 63 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHc--------------------------CCCCCCcCC-CCCCHHHHHHHcCCHHHH
Confidence 45678999999999999999999998 456777886 899999999999999999
Q ss_pred HHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 85 EILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 85 klLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+..+..+
T Consensus 64 ~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~ 127 (136)
T 2jab_A 64 EVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNED 127 (136)
T ss_dssp HHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHH
Confidence 9999999999999999999999999999999999999999999988999999999998766554
No 48
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.81 E-value=2.4e-19 Score=183.77 Aligned_cols=145 Identities=11% Similarity=0.020 Sum_probs=131.6
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
+|..|.+|.||||+||..|+.+++++|+++|++++..+..+.+++|+|+..+...+ |++++..+ .|.||||
T Consensus 85 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--~g~t~L~ 162 (285)
T 3d9h_A 85 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES--DLASPIH 162 (285)
T ss_dssp SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC--TTSCHHH
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC--CCCCHHH
Confidence 46788999999999999999999999999999999999999999999999866332 77777655 5999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++. +..|.||+++|+.....+
T Consensus 163 ~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~ 236 (285)
T 3d9h_A 163 EAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEE 236 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999999999999999999999984 788999999998876554
No 49
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.81 E-value=5.7e-20 Score=183.58 Aligned_cols=144 Identities=15% Similarity=0.107 Sum_probs=124.8
Q ss_pred CCCCChHHHHHH---HcCCHHHHHHHHHhCCC-----------CcccCCCCCchhHHHHHhhcccc-------ccccccc
Q 005851 5 AKYAHSPVHLAV---ARRDYAALRRIIATLPR-----------LSKAGEVNTEDESLAAELQADAV-------SAVIDRR 63 (674)
Q Consensus 5 Dk~G~TPLH~AV---~~G~~eiVk~LL~~gad-----------ln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~r 63 (674)
|.+|.||||+|+ ..|+.+++++||+.+++ ++..+..+.+++|+|+..+...+ |++++.+
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 477999999999 66999999999998754 22233467899999999876332 8999998
Q ss_pred C--------------CCCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCHHHHHHHcCC---------HHHH
Q 005851 64 D--------------VPGRETPLHLAVRLRDPISAEILMA---AGADWSLQNENGWSALQEAVCTRE---------ESIA 117 (674)
Q Consensus 64 D--------------~p~G~TPLHlAv~~G~~e~VklLL~---~GAdvn~~N~~G~TPLh~A~~~G~---------~eIV 117 (674)
| . .|+||||+|+..|+.+++++||+ +|++++.+|..|+||||+|+..++ .+++
T Consensus 123 ~~~~~~~~~~~~~~~~-~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v 201 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFY-FGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMY 201 (260)
T ss_dssp CEECCCSSSCCCCSCC-SCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred ccccccCccccccccc-CCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHH
Confidence 8 5 79999999999999999999999 999999999999999999998888 6899
Q ss_pred HHHHHhCCCh-------hhhhhcCCchHHHHHHhhhhhH
Q 005851 118 MIIARHYQPL-------AWAKWCRRLPRIVASAARIRDF 149 (674)
Q Consensus 118 klLL~~ga~i-------~~~d~~grtPl~LAaL~~~~DF 149 (674)
++|+++|+++ +..+..|.||+++|+.....+.
T Consensus 202 ~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 202 DLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 9999999988 6688999999999998765553
No 50
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.81 E-value=2.1e-19 Score=184.82 Aligned_cols=53 Identities=13% Similarity=0.021 Sum_probs=36.8
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhc
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQA 53 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~ 53 (674)
+|..|..|.||||+|+..|+.+++++|+++|++++..+..+.+++|+|+..+.
T Consensus 84 ~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 136 (351)
T 3utm_A 84 VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNR 136 (351)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 35566777777777777777777777777777777666666677777666543
No 51
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.80 E-value=2.2e-19 Score=167.85 Aligned_cols=126 Identities=20% Similarity=0.261 Sum_probs=117.4
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
+|..|.+|.||||+|+..|+.+++++|+++|++++..+..+.+++|+|+..+...+ |++++.+|. .|+||||
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 107 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDW-NGGTPLL 107 (167)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TSCCHHH
T ss_pred cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCC-CCCCHHH
Confidence 46789999999999999999999999999999999988899999999999866332 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCh
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPL 127 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i 127 (674)
+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|++++.++
T Consensus 108 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 108 YAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999887653
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.80 E-value=2.3e-19 Score=179.05 Aligned_cols=136 Identities=16% Similarity=0.109 Sum_probs=121.9
Q ss_pred CCChHHHHHHHcCCHH----HHHHHHHhCCCCcc----cCCCCCchhHHHHHh---hcccc-------cccccc------
Q 005851 7 YAHSPVHLAVARRDYA----ALRRIIATLPRLSK----AGEVNTEDESLAAEL---QADAV-------SAVIDR------ 62 (674)
Q Consensus 7 ~G~TPLH~AV~~G~~e----iVk~LL~~gadln~----~~e~~~~~l~lAa~~---~~d~i-------GAdIn~------ 62 (674)
+|+||||+||..|+.+ ++++|+..+++++. .+..+.+++|+|+.. +...+ |++++.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 80 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcc
Confidence 6899999999999997 66778889999998 788899999999987 65332 555542
Q ss_pred -----cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-------------CCCHHHHHHHcCCHHHHHHHHH--
Q 005851 63 -----RDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNEN-------------GWSALQEAVCTREESIAMIIAR-- 122 (674)
Q Consensus 63 -----rD~p~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~-------------G~TPLh~A~~~G~~eIVklLL~-- 122 (674)
.|. .|+||||+|+..|+.+++++|+++|++++..+.. |+||||+|+..|+.+++++|++
T Consensus 81 ~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 159 (256)
T 2etb_A 81 AQCTDEFY-QGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP 159 (256)
T ss_dssp CCCCSTTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccc-cCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 345 7999999999999999999999999999999876 9999999999999999999999
Q ss_pred -hCCChhhhhhcCCchHHHHHH
Q 005851 123 -HYQPLAWAKWCRRLPRIVASA 143 (674)
Q Consensus 123 -~ga~i~~~d~~grtPl~LAaL 143 (674)
+|++++..+..|+||+|+|+.
T Consensus 160 ~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 160 HQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHH
T ss_pred ccCCCcCccCCCCCCHHHHHHH
Confidence 999999999999999999987
No 53
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.80 E-value=1.8e-19 Score=166.92 Aligned_cols=124 Identities=15% Similarity=0.082 Sum_probs=114.3
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLH 73 (674)
+|..|.+|.||||+|+. |+.+++++|+++|++++..+..+.+++|+|+..+... .|++++.+|. .|+||||
T Consensus 31 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 108 (162)
T 1ihb_A 31 VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDN-EGNLPLH 108 (162)
T ss_dssp TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHH
Confidence 46788999999999999 9999999999999999999999999999999987633 2899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Q 005851 74 LAVRLRDPISAEILMAAGAD-WSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAd-vn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~ 126 (674)
+|+..|+.+++++|+++|++ ++..|..|+||||+|+..|+.+++++|+++|++
T Consensus 109 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 109 LAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 99999999999999999998 699999999999999999999999999999974
No 54
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.80 E-value=3.8e-19 Score=167.44 Aligned_cols=123 Identities=21% Similarity=0.270 Sum_probs=114.6
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
+|..|.+|.||||+|+..|+.+++++|+++|++++..+..+.+++|+|+..+...+ |++++.+|. .|+||||
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~ 118 (169)
T 2y1l_E 40 VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDM-EGHTPLH 118 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHH
Confidence 46788999999999999999999999999999999988899999999999866332 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhC
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~g 124 (674)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 119 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 119 LAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999998765
No 55
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.80 E-value=1.2e-19 Score=190.67 Aligned_cols=144 Identities=17% Similarity=0.105 Sum_probs=129.2
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHH
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHL 74 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHl 74 (674)
+..|.+|.||||+||..|+.+++++||++|++++..+..+.+++|+|+..+...+ |++++. . .|.||||+
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~-~g~t~L~~ 90 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--W-HGQKPIHL 90 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--B-TTBCHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--c-CCCCHHHH
Confidence 5678899999999999999999999999999999999999999999999876333 664443 3 68999999
Q ss_pred HHHcCCHHHHHHHHHc----CCCCCC-----------------CCCCCCCHHHHHHHcC--CHHHHHHHHHhCCChhhhh
Q 005851 75 AVRLRDPISAEILMAA----GADWSL-----------------QNENGWSALQEAVCTR--EESIAMIIARHYQPLAWAK 131 (674)
Q Consensus 75 Av~~G~~e~VklLL~~----GAdvn~-----------------~N~~G~TPLh~A~~~G--~~eIVklLL~~ga~i~~~d 131 (674)
|+..|+.+++++|+++ |++++. .|..|+||||+|+..| +.+++++|+++|++++..+
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d 170 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD 170 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC
Confidence 9999999999999999 888887 8889999999999999 9999999999999999999
Q ss_pred hcCCchHHHHHHhhhhh
Q 005851 132 WCRRLPRIVASAARIRD 148 (674)
Q Consensus 132 ~~grtPl~LAaL~~~~D 148 (674)
..|.||+++|+.....+
T Consensus 171 ~~g~t~L~~A~~~g~~~ 187 (364)
T 3ljn_A 171 KADETPLMRAMEFRNRE 187 (364)
T ss_dssp TTSCCHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHcCCHH
Confidence 99999999999866554
No 56
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.80 E-value=8.1e-19 Score=174.72 Aligned_cols=146 Identities=19% Similarity=0.126 Sum_probs=99.3
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------ccccccc----------C
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRR----------D 64 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~r----------D 64 (674)
+..|.+|.||||+|+..|+.+++++|+++|++++..+..+.+++|+|+..+...+ |++++.. +
T Consensus 66 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~ 145 (285)
T 1wdy_A 66 VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLR 145 (285)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhc
Confidence 4566777777777777777777777777777777666667777777776654221 5555554 4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHhCCChhhhhhcCCchHH
Q 005851 65 VPGRETPLHLAVRLRDPISAEILMAA-GADWSLQNENGWSALQEAVCTRE----ESIAMIIARHYQPLAWAKWCRRLPRI 139 (674)
Q Consensus 65 ~p~G~TPLHlAv~~G~~e~VklLL~~-GAdvn~~N~~G~TPLh~A~~~G~----~eIVklLL~~ga~i~~~d~~grtPl~ 139 (674)
. .|.||||+|+..|+.+++++|+++ |++++..|..|+||||+|+..++ .+++++|+++|++++..+..|.||++
T Consensus 146 ~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~ 224 (285)
T 1wdy_A 146 K-GGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLI 224 (285)
T ss_dssp C-CCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHH
T ss_pred c-CCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 4 567777777777777777777765 77777777777777777777766 66777777777776666666777777
Q ss_pred HHHHhhhhh
Q 005851 140 VASAARIRD 148 (674)
Q Consensus 140 LAaL~~~~D 148 (674)
+|+.....+
T Consensus 225 ~A~~~~~~~ 233 (285)
T 1wdy_A 225 LAVEKKHLG 233 (285)
T ss_dssp HHHHTTCHH
T ss_pred HHHHcCCHH
Confidence 766654433
No 57
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.80 E-value=5.2e-20 Score=181.56 Aligned_cols=146 Identities=19% Similarity=0.140 Sum_probs=125.7
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhCC----CCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCc
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLP----RLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRET 70 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~ga----dln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~T 70 (674)
+.+|.+|.||||+||..|+.++++.||+.+. +++..+..+.+++|+|+..+... .|++++.+|. .|+|
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t 80 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDF-RGNT 80 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCT-TCCC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCC
Confidence 4689999999999999999999999998765 57778888999999999986632 3899999997 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhh-cCCchHHHHHH
Q 005851 71 PLHLAVRLRDPISAEILMAAGAD------WSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKW-CRRLPRIVASA 143 (674)
Q Consensus 71 PLHlAv~~G~~e~VklLL~~GAd------vn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~-~grtPl~LAaL 143 (674)
|||+|+..|+.+++++|+.+|++ ++..+..|+||||+|+..|+.+++++|+++|++++..+. .|.||+|+|+.
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~ 160 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVD 160 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999999999999987 567788999999999999999999999999999998887 99999999998
Q ss_pred hhhhh
Q 005851 144 ARIRD 148 (674)
Q Consensus 144 ~~~~D 148 (674)
....+
T Consensus 161 ~~~~~ 165 (236)
T 1ikn_D 161 LQNPD 165 (236)
T ss_dssp TTCHH
T ss_pred cCCHH
Confidence 66554
No 58
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.80 E-value=3.1e-19 Score=152.36 Aligned_cols=93 Identities=24% Similarity=0.362 Sum_probs=87.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHHHHHH
Q 005851 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISAEI 86 (674)
Q Consensus 7 ~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e~Vkl 86 (674)
+|+||||+|+..|+.+++++|++. |++++.+|. .|+||||+|+..|+.+++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------g~~~n~~d~-~g~t~L~~A~~~~~~~~v~~ 53 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA--------------------------GADVNAKDK-NGRTPLHLAARNGHLEVVKL 53 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCT-TSCCHHHHHHHTTCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc--------------------------CCCCcccCC-CCCCHHHHHHHcCCHHHHHH
Confidence 589999999999999999999998 567888887 99999999999999999999
Q ss_pred HHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Q 005851 87 LMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (674)
Q Consensus 87 LL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~ 126 (674)
|+++|++++.+|..|+||||+|+..|+.+++++|+++|++
T Consensus 54 Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 54 LLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999874
No 59
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.80 E-value=1.2e-19 Score=186.36 Aligned_cols=144 Identities=13% Similarity=-0.016 Sum_probs=128.3
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
+|..|.+|.||||+||..|+.+++++||++|++++..+ +.+++|+|+..+...+ |++++.+|. .|+||||
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~t~L~ 100 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDD-KGNTALY 100 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCC-CCCcHHH
Confidence 47789999999999999999999999999999988764 6899999999866332 999999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCC-CCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENG-WSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G-~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+|+..|+.+++++|+++|++++..+..| .||||+|+..|+.+++++|+++|++.... ..|.||+|+|+.....+
T Consensus 101 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~ 175 (285)
T 3kea_A 101 YAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVD 175 (285)
T ss_dssp HHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHH
Confidence 9999999999999999999999999999 69999999999999999999999876321 27889999999866544
No 60
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.79 E-value=5.1e-19 Score=169.35 Aligned_cols=123 Identities=16% Similarity=0.158 Sum_probs=115.3
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLH 73 (674)
++..|..|.||||+|+..|+.+++++|+++|++++..+..+.+++|+|+..+... .|++++.+|. .|.||||
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 139 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL-EGETPLI 139 (192)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCT-TCCCHHH
T ss_pred cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCCHHH
Confidence 4678899999999999999999999999999999999999999999999986633 2899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhC
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~g 124 (674)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 140 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 140 VASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999875
No 61
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=4.1e-19 Score=190.81 Aligned_cols=147 Identities=16% Similarity=0.122 Sum_probs=128.6
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
+|..|..|.||||+||..|+.+++++||++|++++..+....+++|+|+..+...+ |++++.+|. .|+||||
T Consensus 7 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 85 (437)
T 1n11_A 7 GGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAK-DDQTPLH 85 (437)
T ss_dssp --------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCT-TSCCHHH
T ss_pred ccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CCCCHHH
Confidence 46788999999999999999999999999999999888888999999999876433 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.++++.|++++++....+..|.||+++|+.....+
T Consensus 86 ~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~ 160 (437)
T 1n11_A 86 CAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR 160 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999988888889999999998866544
No 62
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.79 E-value=3.8e-19 Score=180.54 Aligned_cols=143 Identities=17% Similarity=0.069 Sum_probs=119.8
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHHHHH
Q 005851 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAVR 77 (674)
Q Consensus 5 Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHlAv~ 77 (674)
+..|.||||+||..|+.++++.||++|++++..+..+.+++|+|+..+...+ |++++.+|. .|+||||+|+.
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~tpL~~A~~ 115 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDN-EGWIPLHAAAS 115 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHHH
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHH
Confidence 4567899999999999999999999999999888889999999999866332 899999997 99999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCC---------------------------------------------------------
Q 005851 78 LRDPISAEILMAAGADWSLQNEN--------------------------------------------------------- 100 (674)
Q Consensus 78 ~G~~e~VklLL~~GAdvn~~N~~--------------------------------------------------------- 100 (674)
.|+.+++++|+++|++++..|..
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 195 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRH 195 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC
T ss_pred cCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhh
Confidence 99999999999999998877654
Q ss_pred ---CCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 101 ---GWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 101 ---G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+.....+
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~ 246 (299)
T 1s70_B 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEE 246 (299)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred cCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHH
Confidence 566677777777788888888778777777777888888777655443
No 63
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.79 E-value=7.8e-20 Score=182.44 Aligned_cols=135 Identities=10% Similarity=-0.029 Sum_probs=93.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHHHHHH
Q 005851 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLHLAVR 77 (674)
Q Consensus 5 Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLHlAv~ 77 (674)
+..|.||||.|+..|+.++++.||++|++++.. ....+++|.|+..+... .|++++.+|. .|+||||+|+.
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~-~g~t~L~~A~~ 79 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPND-EGITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCT-TSCCHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCC-CCCCHHHHHHH
Confidence 457999999999999999999999999998753 56678999999986632 2889999997 99999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCC-chHHHH
Q 005851 78 LRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRR-LPRIVA 141 (674)
Q Consensus 78 ~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~gr-tPl~LA 141 (674)
.|+.+++++||++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+. ||++++
T Consensus 80 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHH
Confidence 9999999999999999999999999999999999999999999999999998888777 999987
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.79 E-value=1.6e-19 Score=171.26 Aligned_cols=130 Identities=22% Similarity=0.156 Sum_probs=121.1
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLH 73 (674)
+|..|.+|.||||+||..|+.+++++||+.|++++..+..+.+++|+|+..+... .|++++.+|. .|+||||
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~-~g~t~L~ 110 (179)
T 3f6q_A 32 LNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNE-HGNVPLH 110 (179)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TSCCHHH
T ss_pred ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHH
Confidence 4678999999999999999999999999999999999999999999999986633 2899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhh
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAK 131 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d 131 (674)
+|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|++++...
T Consensus 111 ~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~~~ 168 (179)
T 3f6q_A 111 YACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRIP 168 (179)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCSCBC
T ss_pred HHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcccCC
Confidence 9999999999999999999999999999999999999999999999999999987543
No 65
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.79 E-value=2.1e-19 Score=181.36 Aligned_cols=145 Identities=14% Similarity=0.042 Sum_probs=124.8
Q ss_pred CCCCCChHHHHHHHc---CCHHHHHHHHHhCCCC-------cc----cCCCCCchhHHHHHhhcccc-------cccccc
Q 005851 4 FAKYAHSPVHLAVAR---RDYAALRRIIATLPRL-------SK----AGEVNTEDESLAAELQADAV-------SAVIDR 62 (674)
Q Consensus 4 ~Dk~G~TPLH~AV~~---G~~eiVk~LL~~gadl-------n~----~~e~~~~~l~lAa~~~~d~i-------GAdIn~ 62 (674)
.|.+|+||||+||.. |+.+++++||++|++. +. .+..+.+++|+|+..+...+ |++++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 478999999999987 9999999999997653 21 34568899999998866332 889998
Q ss_pred cCC-------------CCCCcHHHHHHHcCCHHHHHHHHH---cCCCCCCCCCCCCCHHHHHHHcCC---------HHHH
Q 005851 63 RDV-------------PGRETPLHLAVRLRDPISAEILMA---AGADWSLQNENGWSALQEAVCTRE---------ESIA 117 (674)
Q Consensus 63 rD~-------------p~G~TPLHlAv~~G~~e~VklLL~---~GAdvn~~N~~G~TPLh~A~~~G~---------~eIV 117 (674)
++. ..|+||||+|+..|+.+++++||+ +|++++.+|..|+||||+|+..|+ .+++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v 209 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMY 209 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHH
Confidence 883 159999999999999999999999 999999999999999999999988 7899
Q ss_pred HHHHHhCCChh-------hhhhcCCchHHHHHHhhhhh
Q 005851 118 MIIARHYQPLA-------WAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 118 klLL~~ga~i~-------~~d~~grtPl~LAaL~~~~D 148 (674)
++|+++|++++ ..+..|.||+++|+.....+
T Consensus 210 ~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~ 247 (273)
T 2pnn_A 210 NEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIG 247 (273)
T ss_dssp HHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHH
Confidence 99999999886 47889999999999876554
No 66
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.79 E-value=5.3e-19 Score=188.24 Aligned_cols=147 Identities=16% Similarity=0.115 Sum_probs=130.8
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------c---ccccccCCCCCCc
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------S---AVIDRRDVPGRET 70 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------G---AdIn~rD~p~G~T 70 (674)
+|..|.+|.||||+||..|+.+++++||++|++++..+..+.+++|+|+..+...+ + ++++..|. .|.|
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~-~g~t 237 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDR-NGMT 237 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCT-TSCC
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCC-CCCC
Confidence 47789999999999999999999999999999999988899999999999865322 3 78888997 9999
Q ss_pred HHHHHHHcC---CHHHHHHHHHcCCCCCC--------CCCCCCCHHHHHHHcCCHHHHHHHHHhC-CChhhhhhcCCchH
Q 005851 71 PLHLAVRLR---DPISAEILMAAGADWSL--------QNENGWSALQEAVCTREESIAMIIARHY-QPLAWAKWCRRLPR 138 (674)
Q Consensus 71 PLHlAv~~G---~~e~VklLL~~GAdvn~--------~N~~G~TPLh~A~~~G~~eIVklLL~~g-a~i~~~d~~grtPl 138 (674)
|||+|+..+ +.+++++|+++|++++. .|..|+||||+|+..|+.+++++|++++ ++++..+..|.||+
T Consensus 238 ~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL 317 (373)
T 2fo1_E 238 ALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPI 317 (373)
T ss_dssp HHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHH
T ss_pred HHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHH
Confidence 999999988 89999999999999886 5678999999999999999999999876 89999999999999
Q ss_pred HHHHHhhhhh
Q 005851 139 IVASAARIRD 148 (674)
Q Consensus 139 ~LAaL~~~~D 148 (674)
++|+.....+
T Consensus 318 ~~A~~~g~~~ 327 (373)
T 2fo1_E 318 MLAAQEGRIE 327 (373)
T ss_dssp HHHHHHTCHH
T ss_pred HHHHHcCCHH
Confidence 9998876554
No 67
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.79 E-value=1.8e-18 Score=172.31 Aligned_cols=144 Identities=16% Similarity=0.036 Sum_probs=132.0
Q ss_pred CcC-CCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 2 EDF-AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 2 N~~-Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
|.. +..|.||||+|+..|+.+++++|+++|++++..+..+.+++|+|+..+...+ |++++.+|. .|+||||
T Consensus 32 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 110 (285)
T 1wdy_A 32 NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDF-YGFTAFM 110 (285)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCT-TCCBHHH
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCc-ccCCHHH
Confidence 444 7789999999999999999999999999999988899999999999866332 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCC----------CCCCCCHHHHHHHcCCHHHHHHHHHh-CCChhhhhhcCCchHHHHH
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQ----------NENGWSALQEAVCTREESIAMIIARH-YQPLAWAKWCRRLPRIVAS 142 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~----------N~~G~TPLh~A~~~G~~eIVklLL~~-ga~i~~~d~~grtPl~LAa 142 (674)
+|+..|+.+++++|+++|++++.. +..|+||||+|+..|+.+++++|++. +.+++..+..|.+|++++.
T Consensus 111 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~ 190 (285)
T 1wdy_A 111 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 190 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 999999999999999999999987 78899999999999999999999987 9999999999999999998
Q ss_pred Hhhh
Q 005851 143 AARI 146 (674)
Q Consensus 143 L~~~ 146 (674)
....
T Consensus 191 ~~~~ 194 (285)
T 1wdy_A 191 LSSD 194 (285)
T ss_dssp HCSC
T ss_pred Hccc
Confidence 7554
No 68
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.78 E-value=9.7e-20 Score=178.63 Aligned_cols=119 Identities=19% Similarity=0.166 Sum_probs=110.0
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHHH
Q 005851 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPIS 83 (674)
Q Consensus 4 ~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e~ 83 (674)
.|..|.||||+||..|+.++++.||+. |++++.+|. .|+||||+||..|+.++
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~~~~~~ 121 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDN--------------------------RVGVNGLDK-AGSTALYWACHGGHKDI 121 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCT-TSCCHHHHHHHTTCHHH
T ss_pred cccccccccccccccCcHHHHHHHHhC--------------------------CCCccccCC-CCCCHHHHHHHcCCHHH
Confidence 466789999999999999999999998 556888886 99999999999999999
Q ss_pred HHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhhH
Q 005851 84 AEILMAA-GADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (674)
Q Consensus 84 VklLL~~-GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~DF 149 (674)
|++||.+ |++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....++
T Consensus 122 v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~ 188 (222)
T 3ehr_A 122 VEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASL 188 (222)
T ss_dssp HHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHH
T ss_pred HHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHH
Confidence 9999999 99999999999999999999999999999999999999999999999999987665553
No 69
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.78 E-value=4.6e-19 Score=181.53 Aligned_cols=146 Identities=13% Similarity=0.048 Sum_probs=110.6
Q ss_pred CcCCCCCChHHHHHHHcCCHH-HHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 2 EDFAKYAHSPVHLAVARRDYA-ALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~e-iVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
+..|..|.||||+|+..++.. ++++|+..|++++..+..+.+++|+|+..+...+ |++++.++. .|.||||
T Consensus 46 ~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~-~g~t~l~ 124 (269)
T 4b93_B 46 SAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNA-DQAVPLH 124 (269)
T ss_dssp -----------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCT-TCCCHHH
T ss_pred cccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCC-CCCCccc
Confidence 456778999999999888764 7899999999999999999999999999876433 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+|+..++.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+|+|+..+..+
T Consensus 125 ~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~ 199 (269)
T 4b93_B 125 LACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVF 199 (269)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred cccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999876544
No 70
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.78 E-value=2.8e-19 Score=157.59 Aligned_cols=109 Identities=19% Similarity=0.271 Sum_probs=100.6
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHH
Q 005851 3 DFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPI 82 (674)
Q Consensus 3 ~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e 82 (674)
..|.+|.||||+||..|+.++++.|+++ |++++.+|. .|+||||+|+..|+.+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~--------------------------g~~~~~~d~-~g~t~L~~A~~~~~~~ 56 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSK--------------------------GADVNARSK-DGNTPLHLAAKNGHAE 56 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTT--------------------------TCCSSCCCS-SSCCTTHHHHTTTCHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCCcCC-CCCCHHHHHHHcCcHH
Confidence 4789999999999999999999999998 456788886 9999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchH
Q 005851 83 SAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPR 138 (674)
Q Consensus 83 ~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl 138 (674)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..+.+|-
T Consensus 57 ~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 57 IVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp HHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred HHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 99999999999999999999999999999999999999999999999988888774
No 71
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.78 E-value=5.8e-19 Score=164.67 Aligned_cols=122 Identities=17% Similarity=0.172 Sum_probs=111.8
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHHH
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLHL 74 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLHl 74 (674)
+..|..|.||||+|+..|+.+++++|++++++++..+..+.+++|+|+..+... .|++++.+|. .|+||||+
T Consensus 36 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~ 114 (165)
T 3twr_A 36 RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADL-WKFTPLHE 114 (165)
T ss_dssp CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TCCCHHHH
T ss_pred cccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCC-CCCCHHHH
Confidence 457788999999999999999999999999999999999999999999986633 2899999997 99999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Q 005851 75 AVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQ 125 (674)
Q Consensus 75 Av~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga 125 (674)
|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|+
T Consensus 115 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 115 AAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999999999999999999999999999877 99999999998765
No 72
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.78 E-value=8.2e-19 Score=186.75 Aligned_cols=148 Identities=16% Similarity=0.169 Sum_probs=132.6
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhC---CCCcccCCCCCchhHHHHHhh---cc-------cccccccc-----
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATL---PRLSKAGEVNTEDESLAAELQ---AD-------AVSAVIDR----- 62 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~g---adln~~~e~~~~~l~lAa~~~---~d-------~iGAdIn~----- 62 (674)
++..|.+|.||||+|+..|+.+++++|++++ .+++..+..+.+++|+|+..+ .. ..|++++.
T Consensus 192 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~ 271 (373)
T 2fo1_E 192 PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAAR 271 (373)
T ss_dssp SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGG
T ss_pred CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccc
Confidence 4678899999999999999999999999987 688888888999999999865 21 12777765
Q ss_pred ---cCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchH
Q 005851 63 ---RDVPGRETPLHLAVRLRDPISAEILMAAG-ADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPR 138 (674)
Q Consensus 63 ---rD~p~G~TPLHlAv~~G~~e~VklLL~~G-Advn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl 138 (674)
.|. .|+||||+|+..|+.++|++|+++| ++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||+
T Consensus 272 ~~~~d~-~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l 350 (373)
T 2fo1_E 272 KDSEKY-KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTAR 350 (373)
T ss_dssp TSSSSC-CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHH
T ss_pred cCcccc-cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHH
Confidence 675 8999999999999999999999876 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhH
Q 005851 139 IVASAARIRDF 149 (674)
Q Consensus 139 ~LAaL~~~~DF 149 (674)
++|+.....+.
T Consensus 351 ~~A~~~g~~~i 361 (373)
T 2fo1_E 351 QLAQANNHHNI 361 (373)
T ss_dssp HHHHHTTCHHH
T ss_pred HHHHHcCCHHH
Confidence 99998766553
No 73
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.78 E-value=6.1e-19 Score=177.98 Aligned_cols=142 Identities=18% Similarity=0.162 Sum_probs=119.0
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHH----hCCCCc----ccCCCCCchhHHHHHh---hcccc-------ccc----
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIA----TLPRLS----KAGEVNTEDESLAAEL---QADAV-------SAV---- 59 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~----~gadln----~~~e~~~~~l~lAa~~---~~d~i-------GAd---- 59 (674)
+..|.+|.||||+||..|+.++++.||+ .+++++ ..+..+.+++|+|+.. +...+ |++
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 4678999999999999999999888887 455554 2366789999999974 43221 433
Q ss_pred ---ccc----cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------CCCCHHHHHHHcCCHHHHH
Q 005851 60 ---IDR----RDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNE--------------NGWSALQEAVCTREESIAM 118 (674)
Q Consensus 60 ---In~----rD~p~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~--------------~G~TPLh~A~~~G~~eIVk 118 (674)
++. .|. .|+||||+|+..|+.++|++||++|++++..+. .|+||||+|+..|+.++++
T Consensus 87 ~~~i~~~~~~~d~-~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 165 (273)
T 2pnn_A 87 KQFVNASYTDSYY-KGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVK 165 (273)
T ss_dssp HHHHTCCCCSTTT-TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHH
T ss_pred hHHhhcccccccC-CCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 333 565 899999999999999999999999999999987 7999999999999999999
Q ss_pred HHHH---hCCChhhhhhcCCchHHHHHHh
Q 005851 119 IIAR---HYQPLAWAKWCRRLPRIVASAA 144 (674)
Q Consensus 119 lLL~---~ga~i~~~d~~grtPl~LAaL~ 144 (674)
+|++ +|++++.++..|+||+|+|+..
T Consensus 166 ~Ll~~~~~gad~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 166 FLLQNSWQPADISARDSVGNTVLHALVEV 194 (273)
T ss_dssp HHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHhcccCCCCceeeCCCCCcHHHHHHHc
Confidence 9999 9999999999999999999874
No 74
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.77 E-value=3.2e-18 Score=163.74 Aligned_cols=140 Identities=14% Similarity=0.113 Sum_probs=128.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCC-CCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHHHH
Q 005851 5 AKYAHSPVHLAVARRDYAALRRIIATLP-RLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAV 76 (674)
Q Consensus 5 Dk~G~TPLH~AV~~G~~eiVk~LL~~ga-dln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHlAv 76 (674)
+.++.||||+||..|+.++++.||..+. +++..+..+.+++|+|+..+...+ |++++.+|. .|.||||+|+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~A~ 80 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNS-ISDSPYLYAG 80 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHHHHHH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH
Confidence 4689999999999999999999999887 888888889999999999876332 899999997 9999999999
Q ss_pred HcCCHHHHHHHH-HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhC-CChhhhhhcCCchHHHHHHhh
Q 005851 77 RLRDPISAEILM-AAGADWSLQNENGWSALQEAVCTREESIAMIIARHY-QPLAWAKWCRRLPRIVASAAR 145 (674)
Q Consensus 77 ~~G~~e~VklLL-~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~g-a~i~~~d~~grtPl~LAaL~~ 145 (674)
..|+.+++++|+ ..+++++..|..|+||||+|+..|+.+++++|+++| .+++..+..|.||+|+|+...
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSS
T ss_pred HcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhc
Confidence 999999999999 678899999999999999999999999999999998 899999999999999998644
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.77 E-value=2.2e-18 Score=159.29 Aligned_cols=116 Identities=21% Similarity=0.214 Sum_probs=109.1
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHHHHH
Q 005851 4 FAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLHLAV 76 (674)
Q Consensus 4 ~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLHlAv 76 (674)
.|.+|.||||+|+..|+.+++++|++.|++++..+..+.+++|+|+..+... .|++++.+|. .|+||||+|+
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~ 108 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDM-LKMTALHWAT 108 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCT-TSCCHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH
Confidence 5778999999999999999999999999999999999999999999886633 2899999997 9999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 005851 77 RLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMII 120 (674)
Q Consensus 77 ~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklL 120 (674)
..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|
T Consensus 109 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 109 EHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999999999999999999999886
No 76
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.77 E-value=2.5e-18 Score=167.27 Aligned_cols=145 Identities=21% Similarity=0.142 Sum_probs=131.0
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
++..|.+|.||||+|+..|+.++++.|++.|++++..+..+.+++|+|+..+...+ |++++..+...|.||||
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 46789999999999999999999999999999999888889999999999876332 77777555425999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhh
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAAR 145 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~ 145 (674)
+|+..|+.+++++|+++|++++..+..|+||||.|+..|+.+++++|+++|++++..+..|.+|+++++...
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~ 153 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRT 153 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998644
No 77
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.77 E-value=6.3e-19 Score=180.90 Aligned_cols=140 Identities=10% Similarity=-0.035 Sum_probs=127.6
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCC-CcHHHHHHHc
Q 005851 7 YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGR-ETPLHLAVRL 78 (674)
Q Consensus 7 ~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G-~TPLHlAv~~ 78 (674)
+|.||||+|+..|+.+++++||++|++++..+..+.+++|+|+..+...+ |++++.+|. .| .||||+|+..
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-~g~~t~L~~A~~~ 139 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGK-TGWKTSFYHAVML 139 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSS-SGGGSHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCC-CCCCCHHHHHHHc
Confidence 59999999999999999999999999999999999999999999876332 999999997 88 7999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCch-HHHHHHhhhhh
Q 005851 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLP-RIVASAARIRD 148 (674)
Q Consensus 79 G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtP-l~LAaL~~~~D 148 (674)
|+.+++++|+++|+++... ..|+||||+|+..|+.+++++|+++|++++..+..|.|| +++|+.....+
T Consensus 140 ~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~ 209 (285)
T 3kea_A 140 NDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIE 209 (285)
T ss_dssp TCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHH
T ss_pred CCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHH
Confidence 9999999999999987333 389999999999999999999999999999999999998 99998766544
No 78
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.76 E-value=3.8e-18 Score=165.97 Aligned_cols=147 Identities=15% Similarity=0.090 Sum_probs=121.1
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccC-CCCCchhHHHHHhhccc-------ccccccccCCCCCCcHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-EVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPL 72 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~-e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPL 72 (674)
++..|.+|.||||+|+..|+.+++++|++.+++++... ..+.+++++|+..+... .|++++.+|. .|.|||
T Consensus 35 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l 113 (240)
T 3eu9_A 35 VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDG-EGCSCI 113 (240)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TSCCHH
T ss_pred cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCC-CCCCHH
Confidence 45678889999999999999999999999988887544 44788999998886632 2788888886 899999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHhCCChhhhhh-cCCchHHHHHHhhhhh
Q 005851 73 HLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTRE-ESIAMIIARHYQPLAWAKW-CRRLPRIVASAARIRD 148 (674)
Q Consensus 73 HlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~-~eIVklLL~~ga~i~~~d~-~grtPl~LAaL~~~~D 148 (674)
|+|+..|+.+++++|+++|++++..+..|+||||+|+..++ ..++++|++.+.+++..+. .|.||+++|+.....+
T Consensus 114 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~ 191 (240)
T 3eu9_A 114 HLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTT 191 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHH
T ss_pred HHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHH
Confidence 99999999999999999999999888888888888886666 7788888888888887775 7888888888765443
No 79
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.76 E-value=9.1e-19 Score=167.51 Aligned_cols=112 Identities=18% Similarity=0.140 Sum_probs=104.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 005851 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (674)
Q Consensus 5 Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e~V 84 (674)
+..|.||||+|+..|+.++++.||+ + ++++.+|. .|+||||+|+..|+.+++
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~--------------------------~~~~~~d~-~g~t~L~~A~~~~~~~~v 92 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-D--------------------------RDVDAVDE-NGRTALLFVAGLGSDKCV 92 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-T--------------------------SCTTCCCT-TSCCHHHHHHHHTCHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-c--------------------------CCCCCcCC-CCCCHHHHHHHcCCHHHH
Confidence 5578999999999999999999998 3 35777886 999999999999999999
Q ss_pred HHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHh
Q 005851 85 EILMAAGADWSLQN-ENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAA 144 (674)
Q Consensus 85 klLL~~GAdvn~~N-~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~ 144 (674)
++|+++|++++.++ ..|+||||+|+..|+.+++++|+++|++++.++..|.||+++|+..
T Consensus 93 ~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 93 RLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 99999999999998 8999999999999999999999999999999999999999999864
No 80
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.76 E-value=4e-18 Score=177.16 Aligned_cols=140 Identities=15% Similarity=0.070 Sum_probs=122.2
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHH-hCCCCcccCCCCCchhHHHHHhhc-----------ccccccccccCCCCCCc
Q 005851 3 DFAKYAHSPVHLAVARRDYAALRRIIA-TLPRLSKAGEVNTEDESLAAELQA-----------DAVSAVIDRRDVPGRET 70 (674)
Q Consensus 3 ~~Dk~G~TPLH~AV~~G~~eiVk~LL~-~gadln~~~e~~~~~l~lAa~~~~-----------d~iGAdIn~rD~p~G~T 70 (674)
..+..|.||||+||..|+.+++++||. .|++++..+..+.+++++++.... ...|+++|.+|. .|+|
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~-~g~t 241 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE-RGKT 241 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCG-GGCC
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCC-CCCC
Confidence 356789999999999999999999996 589999988888888887765432 123899999997 9999
Q ss_pred HHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 71 PLHLAVRLRDPISAEILMAA-GADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 71 PLHlAv~~G~~e~VklLL~~-GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
|||+|+..|+.+++++|+.. |++++.+|..|+||||+|+..|+.+++++|+++|++++. .+|+++|+.....+
T Consensus 242 ~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~~~~~ 315 (337)
T 4g8k_A 242 PLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-----GDLVMTARRNYDHS 315 (337)
T ss_dssp HHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-----CCHHHHHHHTTCHH
T ss_pred HHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCHHHHHHHcCCHH
Confidence 99999999999999999985 899999999999999999999999999999999998763 56999998765443
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.76 E-value=2.6e-19 Score=174.22 Aligned_cols=138 Identities=9% Similarity=-0.094 Sum_probs=105.4
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhc-----------ccccccccccCCCCCCcHHHHHHH
Q 005851 9 HSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQA-----------DAVSAVIDRRDVPGRETPLHLAVR 77 (674)
Q Consensus 9 ~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~-----------d~iGAdIn~rD~p~G~TPLHlAv~ 77 (674)
+++||.||..|+.+.++.++..+.+.. .+..+.+++|+|+..+. ...|+++|.+|. .|+||||+|+.
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~~~~-~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~-~g~TpLh~a~~ 84 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGYEDK-ESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTK-EGTTLFFPLFQ 84 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSSSCH-HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCT-TCCCTHHHHHH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCcccc-cccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHH
Confidence 456666666666666666666543221 11335566666665432 112889999997 99999999999
Q ss_pred cCC------HHHHHHHHHcCCCCCCCCCCCC-CHHHHHHHcCC-----HHHHHHHHH-hCCChhhhhhcCCchHHHHHHh
Q 005851 78 LRD------PISAEILMAAGADWSLQNENGW-SALQEAVCTRE-----ESIAMIIAR-HYQPLAWAKWCRRLPRIVASAA 144 (674)
Q Consensus 78 ~G~------~e~VklLL~~GAdvn~~N~~G~-TPLh~A~~~G~-----~eIVklLL~-~ga~i~~~d~~grtPl~LAaL~ 144 (674)
.|+ .+++++||++||+++.+|..|+ ||||+|+..+. .+++++|+. +|++++.++..|+||+++|...
T Consensus 85 ~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~ 164 (186)
T 3t8k_A 85 GGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRC 164 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTT
T ss_pred cCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHc
Confidence 887 5789999999999999999999 99999998543 568999999 9999999999999999999876
Q ss_pred hhhh
Q 005851 145 RIRD 148 (674)
Q Consensus 145 ~~~D 148 (674)
..+.
T Consensus 165 ~~~~ 168 (186)
T 3t8k_A 165 QKPI 168 (186)
T ss_dssp TCHH
T ss_pred CCHH
Confidence 6544
No 82
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.76 E-value=3.2e-18 Score=157.82 Aligned_cols=120 Identities=16% Similarity=0.174 Sum_probs=112.0
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHH
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLH 73 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLH 73 (674)
+|..|.+|.||||+ |..|+.+++++|+++|++++..+..+.+++|+|+..+...+ |++++.+|. .|+||||
T Consensus 29 ~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~L~ 106 (156)
T 1bd8_A 29 PDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDG-TGALPIH 106 (156)
T ss_dssp TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCT-TSCCHHH
T ss_pred ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCC-CCCcHHH
Confidence 46788999999999 99999999999999999999999999999999999866332 899999997 9999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARH 123 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ 123 (674)
+|+..|+.+++++|+++ ++++.+|..|+||||+|+..|+.+++++|+++
T Consensus 107 ~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 107 LAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 99999999999999999 99999999999999999999999999999864
No 83
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.76 E-value=1.5e-18 Score=173.30 Aligned_cols=140 Identities=18% Similarity=0.134 Sum_probs=119.8
Q ss_pred CCCCCChHHHHHHHcCCHHHHHH----HHHhCCCCcccC----CCCCchhHHHH---Hhhcccc-------c--------
Q 005851 4 FAKYAHSPVHLAVARRDYAALRR----IIATLPRLSKAG----EVNTEDESLAA---ELQADAV-------S-------- 57 (674)
Q Consensus 4 ~Dk~G~TPLH~AV~~G~~eiVk~----LL~~gadln~~~----e~~~~~l~lAa---~~~~d~i-------G-------- 57 (674)
.+.+|+++||.||..|+.++++. |+..+++++... ..+.+++|+|+ ..+...+ |
T Consensus 1 ~~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 1 MKVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred CccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 36789999999999999995544 445899888654 66899999999 3344221 3
Q ss_pred ---ccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC--------------CCCCCHHHHHHHcCCHHHHHHH
Q 005851 58 ---AVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQN--------------ENGWSALQEAVCTREESIAMII 120 (674)
Q Consensus 58 ---AdIn~rD~p~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N--------------~~G~TPLh~A~~~G~~eIVklL 120 (674)
..++..|. .|+||||+|+..|+.++|++||++|++++..+ ..|+||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~~d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 159 (260)
T 3jxi_A 81 FINSPFRDVYY-RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159 (260)
T ss_dssp HHTCCBCCSSE-ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred hhccccccccc-CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 34556665 89999999999999999999999999999998 6899999999999999999999
Q ss_pred HH---hCCChhhhhhcCCchHHHHHHh
Q 005851 121 AR---HYQPLAWAKWCRRLPRIVASAA 144 (674)
Q Consensus 121 L~---~ga~i~~~d~~grtPl~LAaL~ 144 (674)
++ +|++++.++..|+||+|+|+..
T Consensus 160 l~~~~~ga~~~~~d~~g~TpLh~A~~~ 186 (260)
T 3jxi_A 160 TENGHKQADLRRQDSRGNTVLHALVAI 186 (260)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred HhccccCCCCcccCCCCCcHHHHHHHh
Confidence 99 9999999999999999999853
No 84
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.76 E-value=3.5e-19 Score=178.02 Aligned_cols=112 Identities=14% Similarity=0.109 Sum_probs=95.9
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHH
Q 005851 3 DFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPI 82 (674)
Q Consensus 3 ~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e 82 (674)
..+..|.||||+||..|+.+++++||+. |++++.+|. .|+||||+|+..|+.+
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--------------------------g~~~~~~d~-~g~tpLh~A~~~g~~~ 68 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKE--------------------------MNDPSQPNE-EGITALHNAICGANYS 68 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHH--------------------------SSCTTCCCT-TSCCHHHHHHHTTCHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhc--------------------------CCCCCCCCC-CCCCHHHHHHHcCCHH
Confidence 4566788999999999999999999998 455777776 8888888888888888
Q ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhh-hcCCchHHHH
Q 005851 83 SAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAK-WCRRLPRIVA 141 (674)
Q Consensus 83 ~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d-~~grtPl~LA 141 (674)
++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|.||+++|
T Consensus 69 ~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 69 IVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 8888888888888888888888888888888888888888888888775 5888888887
No 85
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.75 E-value=1.7e-17 Score=172.37 Aligned_cols=143 Identities=16% Similarity=0.037 Sum_probs=113.2
Q ss_pred CcCCC-CCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcc-------cccccccccCCCCCCcHHH
Q 005851 2 EDFAK-YAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQAD-------AVSAVIDRRDVPGRETPLH 73 (674)
Q Consensus 2 N~~Dk-~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d-------~iGAdIn~rD~p~G~TPLH 73 (674)
|.+|. .|+||||+||..|+.+++++||++|++++..+....++++++...... ..+++++..|. .|+||||
T Consensus 52 n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~g~t~l~ 130 (337)
T 4g8k_A 52 NFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDF-YGFTAFM 130 (337)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCT-TCCBHHH
T ss_pred CccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhcc-CCCCHHH
Confidence 44543 477777777777777777777777777777776677777666665432 22678888897 8999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCC----------CCCCCCHHHHHHHcCCHHHHHHHHH-hCCChhhhhhcCCchHHHHH
Q 005851 74 LAVRLRDPISAEILMAAGADWSLQ----------NENGWSALQEAVCTREESIAMIIAR-HYQPLAWAKWCRRLPRIVAS 142 (674)
Q Consensus 74 lAv~~G~~e~VklLL~~GAdvn~~----------N~~G~TPLh~A~~~G~~eIVklLL~-~ga~i~~~d~~grtPl~LAa 142 (674)
+|+..|+.+++++|+.+|++++.. +..|+||||+|+..|+.+++++|+. .|++++..+..|.+|++.+.
T Consensus 131 ~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~ 210 (337)
T 4g8k_A 131 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL 210 (337)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHH
Confidence 999999999999999999988764 3468999999999999999999996 58999988899999998876
Q ss_pred Hhh
Q 005851 143 AAR 145 (674)
Q Consensus 143 L~~ 145 (674)
...
T Consensus 211 ~~~ 213 (337)
T 4g8k_A 211 LSS 213 (337)
T ss_dssp HHS
T ss_pred HHc
Confidence 643
No 86
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.74 E-value=2e-18 Score=173.42 Aligned_cols=111 Identities=18% Similarity=0.144 Sum_probs=103.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 005851 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (674)
Q Consensus 5 Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e~V 84 (674)
+..|.||||+||..|+.++++.||+ + +++|.+|. .|+||||+|+..|+.++|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~--------------------------~~~~~~d~-~g~t~L~~A~~~g~~~~v 93 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-D--------------------------RDVDAVDE-NGRTALLFVAGLGSDKCV 93 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-T--------------------------CCTTCBCT-TSCBHHHHHHHHTCHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-C--------------------------CCCCCcCC-CCCCHHHHHHHCCCHHHH
Confidence 4578999999999999999999998 4 35777886 999999999999999999
Q ss_pred HHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHH
Q 005851 85 EILMAAGADWSLQN-ENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASA 143 (674)
Q Consensus 85 klLL~~GAdvn~~N-~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL 143 (674)
++||++|++++.++ ..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.
T Consensus 94 ~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 94 RLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp HHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred HHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 99999999999998 889999999999999999999999999999999999999999974
No 87
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.74 E-value=1.1e-17 Score=152.17 Aligned_cols=97 Identities=26% Similarity=0.335 Sum_probs=90.9
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCC
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~ 80 (674)
+|..|.+|.||||+||..|+.+++++|+++ |++++.+|. .|+||||+|+..|+
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------g~~~~~~d~-~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 40 VNAKDEYGLTPLYLATAHGHLEIVEVLLKN--------------------------GADVNAVDA-IGFTPLHLAAFIGH 92 (136)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCT-TCCCHHHHHHHHTC
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCcCCC-CCCCHHHHHHHcCC
Confidence 467899999999999999999999999998 566888887 99999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhC
Q 005851 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (674)
Q Consensus 81 ~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~g 124 (674)
.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|
T Consensus 93 ~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 93 LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999875
No 88
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.72 E-value=2.8e-18 Score=171.17 Aligned_cols=127 Identities=12% Similarity=0.069 Sum_probs=114.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCCCcHHHHHHH
Q 005851 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGRETPLHLAVR 77 (674)
Q Consensus 5 Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G~TPLHlAv~ 77 (674)
+..|.||||+|+..|+.++++.||+.|++++..+..+.+++|+|+..+...+ |+++|.+|. .|+||||+|+.
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~-~g~tpL~~A~~ 112 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADS-DGWTPLHCAAS 112 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCT-TCCCHHHHHHH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHH
Confidence 3567899999999999999999999999999999999999999999876333 999999997 99999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCC-CHHHHH--HHcCCHHHHHHHHHhCCChhhhhh
Q 005851 78 LRDPISAEILMAAGADWSLQNENGW-SALQEA--VCTREESIAMIIARHYQPLAWAKW 132 (674)
Q Consensus 78 ~G~~e~VklLL~~GAdvn~~N~~G~-TPLh~A--~~~G~~eIVklLL~~ga~i~~~d~ 132 (674)
.|+.+++++|+++|++++..+..|. ||||+| +..|+.+++++|+.++++++..+.
T Consensus 113 ~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~ 170 (239)
T 1ycs_B 113 CNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNK 170 (239)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGG
T ss_pred cCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccccccc
Confidence 9999999999999999999997777 999999 788999999999999988775543
No 89
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.70 E-value=2.7e-17 Score=171.64 Aligned_cols=131 Identities=18% Similarity=0.137 Sum_probs=106.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHHhCCCCcc------cCCCCCchhHHHHHh---hcc-------cccccccccCCCCCCcH
Q 005851 8 AHSPVHLAVARRDYAALRRIIATLPRLSK------AGEVNTEDESLAAEL---QAD-------AVSAVIDRRDVPGRETP 71 (674)
Q Consensus 8 G~TPLH~AV~~G~~eiVk~LL~~gadln~------~~e~~~~~l~lAa~~---~~d-------~iGAdIn~rD~p~G~TP 71 (674)
+.++||.|+..|+.+.++.||..+++++. .+..+.+++|+|+.. +.. ..|+++|.+|. .|+||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~-~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT-TCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC-CCCCH
Confidence 34679999999999999999999999887 466778889998875 221 12888999996 89999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhh
Q 005851 72 LHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAAR 145 (674)
Q Consensus 72 LHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~ 145 (674)
||+|+..|+.+++++||++||+++.+|..|+||||+|+..|+.+++++|+++|++ .|.||+++|+...
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g 297 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWV 297 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999887764 5788998887543
No 90
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.70 E-value=4.1e-17 Score=166.82 Aligned_cols=123 Identities=21% Similarity=0.209 Sum_probs=113.8
Q ss_pred CCcCCCCCChHHHHHH-----HcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccc-------cccccccCCCCC
Q 005851 1 MEDFAKYAHSPVHLAV-----ARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAV-------SAVIDRRDVPGR 68 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV-----~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~i-------GAdIn~rD~p~G 68 (674)
+|..|.+|.||||+|+ ..++.++++.|+..|...+..+..+.+++|+|+..+...+ |+++|.+|. .|
T Consensus 138 ~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~-~G 216 (276)
T 4hbd_A 138 VDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDD-DG 216 (276)
T ss_dssp TTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT-TS
T ss_pred CCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-CC
Confidence 4678999999999999 6689999999999998888888889999999999876332 999999997 99
Q ss_pred CcHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhC
Q 005851 69 ETPLHLAVRLRDPISAEILMA-AGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (674)
Q Consensus 69 ~TPLHlAv~~G~~e~VklLL~-~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~g 124 (674)
+||||+|+..|+.+++++||+ +|++++.+|..|+||||+|+..|+.+++++|++++
T Consensus 217 ~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 217 STALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 999999999999999999999 89999999999999999999999999999999875
No 91
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.69 E-value=7.7e-17 Score=166.17 Aligned_cols=98 Identities=17% Similarity=0.225 Sum_probs=92.5
Q ss_pred CcCCCCCChHHHHHHHc---CCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHc
Q 005851 2 EDFAKYAHSPVHLAVAR---RDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRL 78 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~---G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~ 78 (674)
+..|..|.||||+||.. |+.+++++||++ |+++|.+|. .|+||||+|+..
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~--------------------------ga~in~~d~-~g~TpLh~A~~~ 215 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQN--------------------------SGNLDKQTG-KGSTALHYCCLT 215 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH--------------------------CSCTTCCCT-TCCCHHHHHHHT
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHHC--------------------------CCCccccCC-CCCCHHHHHHHc
Confidence 45688999999999999 899999999999 567888897 999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Q 005851 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (674)
Q Consensus 79 G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~ 126 (674)
|+.++|++||++||+++.+|..|+||||+|+..|+.+++++|+++|+.
T Consensus 216 g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 216 DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999998874
No 92
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.69 E-value=6.9e-17 Score=142.57 Aligned_cols=92 Identities=25% Similarity=0.302 Sum_probs=83.7
Q ss_pred CcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCH
Q 005851 2 EDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDP 81 (674)
Q Consensus 2 N~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~ 81 (674)
+..|.+|.||||+||..|+.+++++|++. |++++.+|. .|+||||+|+..|+.
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--------------------------g~~i~~~d~-~g~tpLh~A~~~~~~ 70 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMAN--------------------------GADVAAKDK-NGSTPLHLAARNGHL 70 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCT-TCCCHHHHHHHTTCH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCccCC-CCCCHHHHHHHcCCH
Confidence 45788999999999999999999999998 556788886 999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 005851 82 ISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMII 120 (674)
Q Consensus 82 e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklL 120 (674)
+++++|+.+|++++.+|..|+||||+|+..|+.+++++|
T Consensus 71 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 71 EVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHcCCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999999999999999999876
No 93
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.67 E-value=1.8e-16 Score=175.97 Aligned_cols=127 Identities=17% Similarity=0.131 Sum_probs=104.7
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCCCccc------CCCCCchhHHHHH---hhcc-------cccccccccCCCCCCcHH
Q 005851 9 HSPVHLAVARRDYAALRRIIATLPRLSKA------GEVNTEDESLAAE---LQAD-------AVSAVIDRRDVPGRETPL 72 (674)
Q Consensus 9 ~TPLH~AV~~G~~eiVk~LL~~gadln~~------~e~~~~~l~lAa~---~~~d-------~iGAdIn~rD~p~G~TPL 72 (674)
.+.||.|+..|+.++++.||..|++++.. +..+.+++|+|+. .+.. ..|+++|.+|. .|+|||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~-~g~TpL 211 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTAL 211 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCS-SSCCHH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCC-CCCcHH
Confidence 36799999999999999999999999876 6778899999965 4432 22899999997 999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHH
Q 005851 73 HLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVAS 142 (674)
Q Consensus 73 HlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAa 142 (674)
|+|+..|+.++|++||++||+++.+|..|+||||+|+..|+.+++++|+++|++++. +|+|++.
T Consensus 212 h~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 212 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp HHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 999999999999999999999999999999999999999999999999999998765 4666543
No 94
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.65 E-value=2.8e-16 Score=169.41 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=87.1
Q ss_pred CCChHHHHHHHc-CCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccC--CCCCCcHHHHHHHcCCHHH
Q 005851 7 YAHSPVHLAVAR-RDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRD--VPGRETPLHLAVRLRDPIS 83 (674)
Q Consensus 7 ~G~TPLH~AV~~-G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD--~p~G~TPLHlAv~~G~~e~ 83 (674)
.+.|+||+|+.. |+.++++.||.+|++ +|..| . .|.||||+|+..|+.++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad--------------------------vn~~~~~~-~g~TpLh~Aa~~g~~~i 250 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD--------------------------VNWVNGGQ-DNATPLIQATAANSLLA 250 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC--------------------------TTCCCTTT-TCCCHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC--------------------------CCcccccc-CCCCHHHHHHHCCCHHH
Confidence 456899999999 999999999999554 44444 4 67777777777777777
Q ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 84 AEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 84 VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
|++||++||+++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 251 v~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~ 315 (368)
T 3jue_A 251 CEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANAD 315 (368)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHH
Confidence 77777777777777777777777777777777777777777777777777777777776655444
No 95
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.65 E-value=1.8e-16 Score=144.08 Aligned_cols=90 Identities=20% Similarity=0.090 Sum_probs=84.2
Q ss_pred cccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhc-CC
Q 005851 57 SAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWC-RR 135 (674)
Q Consensus 57 GAdIn~rD~p~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~-gr 135 (674)
+++++.+|. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+. |+.+++++|+++|++++..+.. |.
T Consensus 2 ~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~ 79 (136)
T 1d9s_A 2 SPGIHMLGG-SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT 79 (136)
T ss_dssp CCCCSCCCC-CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred CCCccCCCC-CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence 457889997 99999999999999999999999999999999999999999999 9999999999999999999999 99
Q ss_pred chHHHHHHhhhhh
Q 005851 136 LPRIVASAARIRD 148 (674)
Q Consensus 136 tPl~LAaL~~~~D 148 (674)
||+|+|+.....+
T Consensus 80 t~L~~A~~~~~~~ 92 (136)
T 1d9s_A 80 RPVHDAAREGFLD 92 (136)
T ss_dssp CHHHHHHHHTCHH
T ss_pred CHHHHHHHcCCHH
Confidence 9999999866544
No 96
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.63 E-value=1.4e-15 Score=156.74 Aligned_cols=119 Identities=21% Similarity=0.167 Sum_probs=106.4
Q ss_pred ChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHc---CCHHHHH
Q 005851 9 HSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRL---RDPISAE 85 (674)
Q Consensus 9 ~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~---G~~e~Vk 85 (674)
.++||.|+..|+.+.+..++..|++++..- .++..|. .|+||||+|+.. |+.++++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~--------------------~l~~~~~-~g~t~Lh~A~~~~~~~~~~~v~ 189 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKI--------------------PLANGHE-PDETALHLAVRSVDRTSLHIVD 189 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBC--------------------CCSSCSS-TTCBHHHHHHHHCCTTTHHHHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhc--------------------ccccccc-CCCCcchHHHHhcccchHHHHH
Confidence 468999999999999999999976653211 1555676 899999999999 8999999
Q ss_pred HHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 86 ILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 86 lLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+|+++||+++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||+++|+.....+
T Consensus 190 ~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~ 252 (278)
T 1dcq_A 190 FLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEH 252 (278)
T ss_dssp HHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999866554
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.63 E-value=1.7e-16 Score=155.54 Aligned_cols=107 Identities=14% Similarity=0.054 Sum_probs=86.2
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCC
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~ 80 (674)
+|..|.+|.||||+||..|+.+++++||+.. |++++.+|. .|+||||+|+..|+
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-------------------------g~~~~~~d~-~g~tpL~~A~~~~~ 152 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQP-------------------------NIELNQQNK-LGDTALHAAAWKGY 152 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTTST-------------------------TCCCCCCCT-TSCCHHHHHHHHTC
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHcCC-------------------------CCCccccCC-CCCCHHHHHHHcCC
Confidence 4678999999999999999999999999861 456888887 99999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhc
Q 005851 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWC 133 (674)
Q Consensus 81 ~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~ 133 (674)
.+++++||++||+++.+|..|+||||+|+..|+.++++.|+..++.....+..
T Consensus 153 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~ 205 (222)
T 3ehr_A 153 ADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAE 205 (222)
T ss_dssp HHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------------
T ss_pred HHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchh
Confidence 99999999999999999999999999999999999999999998877655443
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.62 E-value=1.3e-15 Score=135.91 Aligned_cols=83 Identities=22% Similarity=0.270 Sum_probs=77.4
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCC
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~ 80 (674)
+|..|.+|.||||+||..|+.+++++|++. |++++.+|. .|+||||+|+..|+
T Consensus 33 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------g~~~~~~d~-~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 33 VNRTLEGGRKPLHYAADCGQLEILEFLLLK--------------------------GADINAPDK-HHITPLLSAVYEGH 85 (123)
T ss_dssp TTSCCTTSSCHHHHHHHTTCHHHHHHHHTT--------------------------TCCTTCCCT-TSCCHHHHHHHHTC
T ss_pred cCccCCCCCcHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCcCCC-CCCCHHHHHHHcCC
Confidence 467889999999999999999999999998 566888887 99999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Q 005851 81 PISAEILMAAGADWSLQNENGWSALQEAVC 110 (674)
Q Consensus 81 ~e~VklLL~~GAdvn~~N~~G~TPLh~A~~ 110 (674)
.+++++|+++|++++.+|..|+||||+|..
T Consensus 86 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 86 VSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 999999999999999999999999999943
No 99
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.61 E-value=2e-16 Score=143.50 Aligned_cols=97 Identities=14% Similarity=0.180 Sum_probs=86.2
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCC
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRD 80 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~ 80 (674)
+|..|.+|.||||+|+..|+.+++++|+++ |++++.+|. .|+||||+|+..|+
T Consensus 36 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--------------------------g~~~~~~~~-~g~t~L~~A~~~~~ 88 (137)
T 3c5r_A 36 PNVKDHAGWTPLHEACNHGHLKVVELLLQH--------------------------KALVNTTGY-QNDSPLHDAAKNGH 88 (137)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHHT--------------------------TCCTTCCCG-GGCCHHHHHHHTTC
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCcccCcCC-CCCCHHHHHHHcCC
Confidence 467889999999999999999999999998 556788886 89999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhC
Q 005851 81 PISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHY 124 (674)
Q Consensus 81 ~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~g 124 (674)
.+++++|+++|++++.+|..|+||||+|+..+..+++.+|.+..
T Consensus 89 ~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 89 VDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 99999999999999999999999999999888888887776544
No 100
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.60 E-value=3.3e-15 Score=149.23 Aligned_cols=82 Identities=18% Similarity=0.053 Sum_probs=78.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhh
Q 005851 67 GRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (674)
Q Consensus 67 ~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~ 146 (674)
.|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|+....
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCND 99 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999998665
Q ss_pred hh
Q 005851 147 RD 148 (674)
Q Consensus 147 ~D 148 (674)
.+
T Consensus 100 ~~ 101 (229)
T 2vge_A 100 TV 101 (229)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.60 E-value=2.4e-15 Score=162.11 Aligned_cols=99 Identities=20% Similarity=0.229 Sum_probs=91.4
Q ss_pred CCcCC--CCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHc
Q 005851 1 MEDFA--KYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRL 78 (674)
Q Consensus 1 IN~~D--k~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~ 78 (674)
+|..| .+|.||||+||..|+.+++++||++ |+++|.+|. .|+||||+|+..
T Consensus 226 vn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~--------------------------Gadvn~~d~-~G~TpLh~A~~~ 278 (368)
T 3jue_A 226 VNWVNGGQDNATPLIQATAANSLLACEFLLQN--------------------------GANVNQADS-AGRGPLHHATIL 278 (368)
T ss_dssp TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT--------------------------TCCTTCCCT-TSCCHHHHHHHH
T ss_pred CCccccccCCCCHHHHHHHCCCHHHHHHHHHc--------------------------CCCCCCCCC-CCCCHHHHHHHc
Confidence 35566 8899999999999999999999998 567888887 999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Q 005851 79 RDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQP 126 (674)
Q Consensus 79 G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~ 126 (674)
|+.+++++||++||+++.+|..|+||||+|+..|+.+++++|+.++..
T Consensus 279 g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999987644
No 102
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.60 E-value=4.8e-16 Score=148.57 Aligned_cols=105 Identities=21% Similarity=0.265 Sum_probs=90.6
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccC-CCCCCcHHHHHHHcC
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRD-VPGRETPLHLAVRLR 79 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD-~p~G~TPLHlAv~~G 79 (674)
+|..|.+|+||||+|+..|+.+++++|+++ |++++.+| . .|+||||+|+..|
T Consensus 69 ~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~--------------------------ga~~~~~~~~-~g~tpL~~A~~~~ 121 (183)
T 3deo_A 69 VDAVDENGRTALLFVAGLGSDKCVRLLAEA--------------------------GADLDHRDMR-GGLTALHMAAGYV 121 (183)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCSS-SSCCHHHHHHHTT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHc--------------------------CCCCCcCCCC-CCCCHHHHHHhcC
Confidence 577899999999999999999999999998 55677777 5 8999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhhH
Q 005851 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRDF 149 (674)
Q Consensus 80 ~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~DF 149 (674)
+.+++++|+++|++++.+|..|+||||+|+..++. ..+.+++++++.....+.
T Consensus 122 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i 174 (183)
T 3deo_A 122 RPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKV 174 (183)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHH
Confidence 99999999999999999999999999999864322 345678888777665554
No 103
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.60 E-value=2.5e-15 Score=150.91 Aligned_cols=104 Identities=21% Similarity=0.267 Sum_probs=91.4
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccC-CCCCCcHHHHHHHcC
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRD-VPGRETPLHLAVRLR 79 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD-~p~G~TPLHlAv~~G 79 (674)
+|..|.+|+||||+||..|+.+++++||++ |++++.+| . .|+||||+|+..|
T Consensus 70 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--------------------------ga~~~~~~~~-~g~t~L~~A~~~g 122 (244)
T 3ui2_A 70 VDAVDENGRTALLFVAGLGSDKCVRLLAEA--------------------------GADLDHRDMR-GGLTALHMAAGYV 122 (244)
T ss_dssp TTCBCTTSCBHHHHHHHHTCHHHHHHHHHT--------------------------TCCTTCCCSS-SCCCHHHHHHHTT
T ss_pred CCCcCCCCCCHHHHHHHCCCHHHHHHHHHc--------------------------CCCCCcCCCC-CCCCHHHHHHHcC
Confidence 578899999999999999999999999998 55677777 5 7999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 80 DPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 80 ~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+.+++++|+++||+++.+|..|+||||+|+..++ ...+.+|+++++.....+
T Consensus 123 ~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~ 174 (244)
T 3ui2_A 123 RPEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEK 174 (244)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHH
Confidence 9999999999999999999999999999985221 246789999998866555
No 104
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.60 E-value=5e-16 Score=162.54 Aligned_cols=137 Identities=12% Similarity=0.025 Sum_probs=107.7
Q ss_pred CCcCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccC-----------------CCCCchhHHHHHhhc-------ccc
Q 005851 1 MEDFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAG-----------------EVNTEDESLAAELQA-------DAV 56 (674)
Q Consensus 1 IN~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~-----------------e~~~~~l~lAa~~~~-------d~i 56 (674)
|+..|..|.+++| |+.++++.||++|.+.+... .......|+|+.... ...
T Consensus 45 i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~ 119 (327)
T 1sw6_A 45 IMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNT 119 (327)
T ss_dssp CEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTS
T ss_pred cccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhc
Confidence 4567889999988 99999999999987654310 001111233333322 223
Q ss_pred cccccc-cCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC---HHHHHHHHHhC-CChhhhh
Q 005851 57 SAVIDR-RDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTRE---ESIAMIIARHY-QPLAWAK 131 (674)
Q Consensus 57 GAdIn~-rD~p~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~---~eIVklLL~~g-a~i~~~d 131 (674)
|+++|. +|. .|+||||+||..|+.++|++||++||+++.+|..|+||||+|+..|+ .+++..|++++ ++++..+
T Consensus 120 g~dvn~~~d~-~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d 198 (327)
T 1sw6_A 120 QLNLNIPVDE-HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED 198 (327)
T ss_dssp CCCSCSCCST-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC
T ss_pred CCCcccccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC
Confidence 799999 897 99999999999999999999999999999999999999999999998 67888888876 7788889
Q ss_pred hcCCchHHHHHH
Q 005851 132 WCRRLPRIVASA 143 (674)
Q Consensus 132 ~~grtPl~LAaL 143 (674)
..|.||+|+|+.
T Consensus 199 ~~g~tpLh~A~~ 210 (327)
T 1sw6_A 199 SMNRTILHHIII 210 (327)
T ss_dssp TTCCCHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 999999999986
No 105
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.59 E-value=4.3e-16 Score=151.51 Aligned_cols=126 Identities=9% Similarity=-0.030 Sum_probs=110.9
Q ss_pred CcCC-CCCChHHHHHHHcCC----HHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcc-------------ccccccccc
Q 005851 2 EDFA-KYAHSPVHLAVARRD----YAALRRIIATLPRLSKAGEVNTEDESLAAELQAD-------------AVSAVIDRR 63 (674)
Q Consensus 2 N~~D-k~G~TPLH~AV~~G~----~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d-------------~iGAdIn~r 63 (674)
+..+ .+|+||||+|+..|+ .+++++||++|++++..+..+.+++|+|+..+.. ..|+++|.+
T Consensus 31 ~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~ 110 (186)
T 3t8k_A 31 EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITAL 110 (186)
T ss_dssp SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSC
T ss_pred ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCcc
Confidence 4445 679999999999985 9999999999999999999999999999887531 129999999
Q ss_pred CCCCCC-cHHHHHHHcC-----CHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChh
Q 005851 64 DVPGRE-TPLHLAVRLR-----DPISAEILMA-AGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLA 128 (674)
Q Consensus 64 D~p~G~-TPLHlAv~~G-----~~e~VklLL~-~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~ 128 (674)
|. .|+ ||||+|+..+ +.+++++||. +||+++.+|..|+||||+|+..|+.+++++|..+....+
T Consensus 111 d~-~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 111 YK-PYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp BG-GGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred CC-CcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 97 999 9999999955 3569999999 999999999999999999999999999999988755433
No 106
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.57 E-value=1.5e-14 Score=127.07 Aligned_cols=82 Identities=23% Similarity=0.254 Sum_probs=70.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhh
Q 005851 67 GRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (674)
Q Consensus 67 ~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~ 146 (674)
+|+||||+|+..|+.+++++|+++|++++..+..|+||||+|+..|+.+++++|+++|.+++..+..|.||+++|+....
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 47889999999999999999998888888888888999999998889899988888888888888888899988887654
Q ss_pred hh
Q 005851 147 RD 148 (674)
Q Consensus 147 ~D 148 (674)
.+
T Consensus 81 ~~ 82 (126)
T 1n0r_A 81 LE 82 (126)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.57 E-value=9e-15 Score=124.48 Aligned_cols=82 Identities=23% Similarity=0.254 Sum_probs=76.7
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhh
Q 005851 67 GRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (674)
Q Consensus 67 ~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~ 146 (674)
+|+||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.++..|.||+++|+....
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999998665
Q ss_pred hh
Q 005851 147 RD 148 (674)
Q Consensus 147 ~D 148 (674)
.+
T Consensus 81 ~~ 82 (93)
T 1n0q_A 81 LE 82 (93)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 108
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.56 E-value=3.6e-15 Score=138.60 Aligned_cols=110 Identities=17% Similarity=0.126 Sum_probs=98.6
Q ss_pred cCCCCCchhHHHHHhhccc-------ccccccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC-HHHHH
Q 005851 37 AGEVNTEDESLAAELQADA-------VSAVIDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWS-ALQEA 108 (674)
Q Consensus 37 ~~e~~~~~l~lAa~~~~d~-------iGAdIn~rD~p~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~T-PLh~A 108 (674)
....+.+++|+|+..+... .|++++.+|. .|+||||+|+ .|+.+++++|+++|++++.+|..|+| |||+|
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A 85 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAGANPNAPNS-YGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDA 85 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCS-SSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 4456788999999987633 2899999997 9999999995 89999999999999999999999999 99999
Q ss_pred HHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 109 VCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 109 ~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 86 ~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 125 (156)
T 1bi7_B 86 AREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD 125 (156)
T ss_dssp HHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHH
T ss_pred HHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHH
Confidence 9999999999999999999999999999999999766554
No 109
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.45 E-value=1.4e-13 Score=121.22 Aligned_cols=89 Identities=17% Similarity=0.094 Sum_probs=79.7
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHH
Q 005851 60 IDRRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRI 139 (674)
Q Consensus 60 In~rD~p~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~ 139 (674)
....|. .|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+..|.||++
T Consensus 17 ~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 17 GSHMGS-DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFD 95 (110)
T ss_dssp -----C-CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred ccccCC-ccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHH
Confidence 455665 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhH
Q 005851 140 VASAARIRDF 149 (674)
Q Consensus 140 LAaL~~~~DF 149 (674)
+|+.....+.
T Consensus 96 ~A~~~~~~~~ 105 (110)
T 2zgd_A 96 ISIDNGNEDL 105 (110)
T ss_dssp HHHHHTCHHH
T ss_pred HHHHcCCHHH
Confidence 9998766554
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.44 E-value=2e-14 Score=155.31 Aligned_cols=119 Identities=12% Similarity=-0.027 Sum_probs=89.1
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHHHH
Q 005851 5 AKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPISA 84 (674)
Q Consensus 5 Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e~V 84 (674)
+.++.||||+||..|+.+++++|++.|+... ..+..+. .|.||||+|+..|+.++|
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~-----------------------~~~~~~~-~~~tpL~~Aa~~G~~eiv 144 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLLLTSDE-----------------------IVKVIQA-ENYQAFRLAAENGHLHVL 144 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC--CCS-----------------------SCC--CH-HHHHHHHHHHHTTCHHHH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHcCCcHH-----------------------HHHHhcc-CCCCHHHHHHHcCCHHHH
Confidence 4556799999999999999999999854210 1122233 567899999999999999
Q ss_pred HHHHHcCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhh--hhhcCCchHHHHH-Hhhhhh
Q 005851 85 EILMAAGADW---SLQNENGWSALQEAVCTREESIAMIIARHYQPLAW--AKWCRRLPRIVAS-AARIRD 148 (674)
Q Consensus 85 klLL~~GAdv---n~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~--~d~~grtPl~LAa-L~~~~D 148 (674)
++|+++||++ +..+.. +||||+|+..|+.+++++|+++|++++. .+..|.||+++|+ ..+..+
T Consensus 145 ~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~e 213 (376)
T 2aja_A 145 NRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN 213 (376)
T ss_dssp HHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHH
T ss_pred HHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHH
Confidence 9999988762 333233 8899999999999999999888888776 7778888999888 765544
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.42 E-value=2.4e-13 Score=150.79 Aligned_cols=105 Identities=12% Similarity=0.064 Sum_probs=94.3
Q ss_pred chhHHHHHhhccc-------cccccccc------CCCCCCcHHHHHHH---cCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Q 005851 43 EDESLAAELQADA-------VSAVIDRR------DVPGRETPLHLAVR---LRDPISAEILMAAGADWSLQNENGWSALQ 106 (674)
Q Consensus 43 ~~l~lAa~~~~d~-------iGAdIn~r------D~p~G~TPLHlAv~---~G~~e~VklLL~~GAdvn~~N~~G~TPLh 106 (674)
..++.|+..+... .|+++|.. |. .|+||||+||. .|+.++|++||++||+++.+|..|+||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~-~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQA-PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCC-SCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCccccc-ccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 4578888776522 28888877 76 89999999977 89999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 107 EAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 107 ~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
+|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~ 254 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 254 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999866555
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.41 E-value=2.3e-13 Score=119.50 Aligned_cols=86 Identities=17% Similarity=0.170 Sum_probs=80.3
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHH
Q 005851 62 RRDVPGRETPLHLAVRLRDPISAEILMAAGADWSLQNENGWSALQEAVCTREESIAMIIARHYQPLAWAKWCRRLPRIVA 141 (674)
Q Consensus 62 ~rD~p~G~TPLHlAv~~G~~e~VklLL~~GAdvn~~N~~G~TPLh~A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LA 141 (674)
.+|. .|+||||+|+..|+.+++++|+++|++++..|..|+||||+|+..|+.+++++|+++|++++..+..|.||+++|
T Consensus 4 ~~d~-~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 4 WGSK-DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CCSC-SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred ccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 3565 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhh
Q 005851 142 SAARIRD 148 (674)
Q Consensus 142 aL~~~~D 148 (674)
+.....+
T Consensus 83 ~~~~~~~ 89 (115)
T 2l6b_A 83 KKNGHHE 89 (115)
T ss_dssp HTTTCHH
T ss_pred HHCCCHH
Confidence 8766444
No 113
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.40 E-value=5.1e-13 Score=139.24 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=92.0
Q ss_pred hhHHHHHhhccc-------ccccccc------cCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Q 005851 44 DESLAAELQADA-------VSAVIDR------RDVPGRETPLHLAVRL---RDPISAEILMAAGADWSLQNENGWSALQE 107 (674)
Q Consensus 44 ~l~lAa~~~~d~-------iGAdIn~------rD~p~G~TPLHlAv~~---G~~e~VklLL~~GAdvn~~N~~G~TPLh~ 107 (674)
+++.|+..+... .|++++. .|. .|+||||+|+.. |+.+++++||++|++++.+|..|+||||+
T Consensus 154 ~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~ 232 (301)
T 2b0o_E 154 RLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQA-PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 232 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCS-CEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred HHhhhhhccCHHHHHHHHhcCCcccccCCCcccCC-CCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 366777665422 2788887 576 899999999997 89999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhhhh
Q 005851 108 AVCTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARIRD 148 (674)
Q Consensus 108 A~~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~~D 148 (674)
|+..|+.+++++|+++|++++..+..|.||+++|+.....+
T Consensus 233 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~ 273 (301)
T 2b0o_E 233 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 273 (301)
T ss_dssp HHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999999999999999999999866554
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.35 E-value=1.6e-14 Score=156.10 Aligned_cols=112 Identities=12% Similarity=0.004 Sum_probs=81.7
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHhCCCCcccCCCCCchhHHHHHhhcccccccccccCCCCCCcHHHHHHHcCCHH
Q 005851 3 DFAKYAHSPVHLAVARRDYAALRRIIATLPRLSKAGEVNTEDESLAAELQADAVSAVIDRRDVPGRETPLHLAVRLRDPI 82 (674)
Q Consensus 3 ~~Dk~G~TPLH~AV~~G~~eiVk~LL~~gadln~~~e~~~~~l~lAa~~~~d~iGAdIn~rD~p~G~TPLHlAv~~G~~e 82 (674)
..|..|.||||+||..|+.+++++|+++|+++.. ++++ +. . .||||+|+..|+.+
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~---------------------~~i~--~~-~-~TpLh~Aa~~G~~e 177 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM---------------------AMIQ--AE-N-YHAFRLAAENGHLH 177 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH---------------------HHHS--HH-H-HHHHHHHHHTTCHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc---------------------cccC--CC-C-CCHHHHHHHCCCHH
Confidence 4556788999999999999999999999654210 1122 21 2 68888888888888
Q ss_pred HHHHHHHcCCCCCC--CCCCCCCHHHHHH-HcCCHHHHHHHHHhCCChhhhhhcCCchHHHHHHhhh
Q 005851 83 SAEILMAAGADWSL--QNENGWSALQEAV-CTREESIAMIIARHYQPLAWAKWCRRLPRIVASAARI 146 (674)
Q Consensus 83 ~VklLL~~GAdvn~--~N~~G~TPLh~A~-~~G~~eIVklLL~~ga~i~~~d~~grtPl~LAaL~~~ 146 (674)
+|++|+++|++++. .|..|+||||+|+ ..|+.+++++|+++|+ .+.||+++|+..+.
T Consensus 178 iv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~ 237 (376)
T 2aja_A 178 VLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGE 237 (376)
T ss_dssp HHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTT
T ss_pred HHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCC
Confidence 88888888888776 7777888888888 8888888888887553 25567776665443
Done!