BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>005854
MPWTTAISLFLLLLTTTNSASVPGLDTFLTRQSQIDPHSSNDSFTSLQSSLKSSLSAATP
PPIPSLINSLLSLSLPISIHIRLVGPTSSFPPSTSSSLLHSYLSAAQSSSRFHVISPSAT
TSSHSLAISHSPHFDISVSPSLASHLSQTLDSLLASTPSSLRSPLLSIPYSSIDEIVKQD
FEKEKHVNGIYIYLLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGP
VDYGPALSGDGVLPKGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYF
ENSLIVQFIHIYGLEGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCS
VCSFAISKSINSYTSRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRV
LPVYVFDLDSNSLLLLDRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERP
LVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNV
LLTSLNYSISSAVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDF
EMALYYLRSSDHDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYT
KRDQLFRNKRKQF

High Scoring Gene Products

Symbol, full name Information P value
AT3G28720 protein from Arabidopsis thaliana 3.2e-216
DDB_G0279945 gene from Dictyostelium discoideum 2.5e-27
AT5G58100 protein from Arabidopsis thaliana 1.8e-19
DDB_G0285083 gene from Dictyostelium discoideum 1.9e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  005854
        (673 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2098423 - symbol:AT3G28720 "AT3G28720" species...  2089  3.2e-216  1
DICTYBASE|DDB_G0279945 - symbol:DDB_G0279945 species:4468...   333  2.5e-27   1
TAIR|locus:2155846 - symbol:AT5G58100 species:3702 "Arabi...   210  1.8e-19   2
DICTYBASE|DDB_G0285083 - symbol:DDB_G0285083 species:4468...   120  1.9e-07   2


>TAIR|locus:2098423 [details] [associations]
            symbol:AT3G28720 "AT3G28720" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            GO:GO:0005783 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP002057
            eggNOG:NOG74397 IPI:IPI00542923 RefSeq:NP_189514.1 UniGene:At.42744
            PaxDb:Q9LHA3 PRIDE:Q9LHA3 EnsemblPlants:AT3G28720.1 GeneID:822504
            KEGG:ath:AT3G28720 TAIR:At3g28720 HOGENOM:HOG000241927
            InParanoid:Q9LHA3 OMA:PRGEFHP PhylomeDB:Q9LHA3
            ProtClustDB:CLSN2684067 Genevestigator:Q9LHA3 Uniprot:Q9LHA3
        Length = 687

 Score = 2089 (740.4 bits), Expect = 3.2e-216, P = 3.2e-216
 Identities = 402/662 (60%), Positives = 492/662 (74%)

Query:    18 NSASVPGLDTFLTRQSQIDPHSSNDXXXXXXXXXXXXXXAATXXXXXXXXXXXXXXXXXX 77
             +S  +PGLDTFLT Q ++DP SSND              +++                  
Sbjct:    30 SSPPIPGLDTFLTNQYRLDPKSSNDSFTSLSSSLKRSLSSSSIHFSSLSKSLLSLSISIP 89

Query:    78 XXXXRLVGXXXXXXXXXXXXXXXXXXXXXXXXXRFHVISPSATTSS-HSLAISHSPHFDI 136
                 R +G                          FHVISPS  +S+ H L ISHS H D 
Sbjct:    90 LNV-RFIGDSFPSSAASTLSEFISAAVTND---NFHVISPSPDSSTNHKLVISHSLHLDA 145

Query:   137 SVSP-SLASHLSQTLDXXXXXXXXXXXXXXXXXXXXXIDEIVKQDFEKEKHVNG-IYIYL 194
             S+SP SL++ L  TL                      IDEI+KQ++EKEKH +G +YIYL
Sbjct:   146 SLSPQSLSTRLDSTLKTLISSTTSSLRSNLLSIQYNPIDEIIKQEYEKEKHGDGGVYIYL 205

Query:   195 LNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGVLP 254
             ++LGS+AK YAYSYS G+SS GFTKCLGSIWTGK+RY+WIDL AGPVDYGPALSGDGVLP
Sbjct:   206 ISLGSQAKPYAYSYSHGDSSAGFTKCLGSIWTGKDRYLWIDLSAGPVDYGPALSGDGVLP 265

Query:   255 KGEFHPLAAFHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVYFENSLIVQFIHIYGL 314
             +GEFHPLAA HGRPKS+KALLADLASLV++AYQVL+VPSLRIPVYFE++L+VQFIH+YG 
Sbjct:   266 RGEFHPLAALHGRPKSEKALLADLASLVYNAYQVLIVPSLRIPVYFEDTLVVQFIHVYGS 325

Query:   315 EGADSSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYT 374
             E  DSSGLD + ++RTFMDEA   GLL+G+Q L+F++Y VN+ +CS+CSFA+S+ +NSYT
Sbjct:   326 EVKDSSGLDLEFVKRTFMDEAESGGLLLGEQKLSFKSYSVNYRECSICSFAVSRGMNSYT 385

Query:   375 SRFLFDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSG---RVLPVYVFXXXXX 431
             SRFLFDNYT+IVSEYLDSK +H+ +++ AEE RRVAGI EE+     RVLPVYVF     
Sbjct:   386 SRFLFDNYTLIVSEYLDSKHMHRALTDSAEELRRVAGIVEEEGNEFARVLPVYVFDLDIN 445

Query:   432 XXXXXXRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWG 491
                   R+HQSVAFRDMVIAVRTR +QTVSDY+CNGRHVF HTR+LERPLVGSILQSMWG
Sbjct:   446 TPLLLDRYHQSVAFRDMVIAVRTRGTQTVSDYTCNGRHVFVHTRDLERPLVGSILQSMWG 505

Query:   492 VSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISS 551
             VS THL WS  HN TLVDYTWSIGQTPFGPFS+ISSLSFVQKDAA+RNV+LTSLN +I+S
Sbjct:   506 VSSTHLTWSPRHNTTLVDYTWSIGQTPFGPFSDISSLSFVQKDAAKRNVILTSLNTTITS 565

Query:   552 AVDVLESIAAHGGERRLLKQNRYLDFVQRWNLFKYKLDKAVTALSHMDFEMALYYLRSSD 611
             A+DV++S  A+GG+  L KQNR+ +F+QRWNL +YKLDK V+ALSH +FEMAL+YLRS+ 
Sbjct:   566 AIDVIDSAVAYGGDVILRKQNRHSEFMQRWNLMQYKLDKTVSALSHNEFEMALFYLRSAS 625

Query:   612 HDLYTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVYTKRDQLFRNKRK 671
             HDLY++HS+V+ A+Q +EASL CFKDPP PW ++S+S    +A+ YV++KRD+LFRNKRK
Sbjct:   626 HDLYSVHSVVYLASQRVEASLNCFKDPPFPWGTVSVSGFGLMAVGYVFSKRDRLFRNKRK 685

Query:   672 QF 673
             QF
Sbjct:   686 QF 687


>DICTYBASE|DDB_G0279945 [details] [associations]
            symbol:DDB_G0279945 species:44689 "Dictyostelium
            discoideum" [GO:0031154 "culmination involved in sorocarp
            development" evidence=IMP] [GO:0044351 "macropinocytosis"
            evidence=RCA] dictyBase:DDB_G0279945 EMBL:AAFI02000035
            GO:GO:0031154 ProtClustDB:CLSZ2846754 RefSeq:XP_641416.1
            EnsemblProtists:DDB0205878 GeneID:8622299 KEGG:ddi:DDB_G0279945
            eggNOG:NOG74397 InParanoid:Q54W34 OMA:HSYLECE Uniprot:Q54W34
        Length = 641

 Score = 333 (122.3 bits), Expect = 2.5e-27, P = 2.5e-27
 Identities = 126/536 (23%), Positives = 247/536 (46%)

Query:   173 IDEIVKQDFEKEKHVNGIYIYLLN-LGSKAKNYA-YSYSPGESSP-------GFTK---- 219
             +D I+ QD++++ H++ + +Y++N +  +  +   Y+YS   S+        G       
Sbjct:   132 VDNIIAQDYKQQNHISYV-VYIINTIYDREDSIEKYTYSQLNSTTINTLHRDGINVVDHL 190

Query:   220 CLGSIWTGKE--------------RYVWIDLGAGPVDYGPALSGDGVLPKGEFHPLAAFH 265
             C   +W  K               RYVWID+GA    YGP   G G++   +  P    H
Sbjct:   191 CNVKLWQSKSESPNNPNNSNDGSGRYVWIDIGAETCTYGPQTKGTGLISNQQL-P----H 245

Query:   266 GRPKSQKALLADLASLVWSAYQVLVVPSL-RIP-----VYFENSLIVQFIHIYG-LEGAD 318
                +  K L  D+++  +   + L+ P +  IP     +  E  LI+   H+ G LE ++
Sbjct:   246 TNSRFTKKLY-DISTFFYHTIRQLISPPIYEIPEKYGWIDLEIQLIMIHDHLVGQLEVSE 304

Query:   319 SSGLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFL 378
                 DW+SI+    ++  +   L+ +Q + F   +V+  +    +     S+ ++ S  +
Sbjct:   305 Q--FDWESIK----EQLGEKMPLLPNQRITFSKREVSLLNNLYAAQIKQSSLKTHHS--V 356

Query:   379 FDNYTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFXXXXXXXXXXXR 438
                      ++LDSK+LH       ++F  +    ++ S  ++P+++F           R
Sbjct:   357 LKG----TQQFLDSKELHHWFKVHIQKF--IPSYLDDSSKTIIPIFLFDISYKELLLLDR 410

Query:   439 FHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHLL 498
             ++Q+V+F DMVI ++T++     DY C+ + +  +  +  +P++ S+L ++WGV    L+
Sbjct:   411 YYQAVSFPDMVIGIQTQSGLMKIDYQCD-KQLGINPMDATKPILQSLLMTIWGVGSNSLV 469

Query:   499 WSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLES 558
              +        ++ W+IG  P   F+ +  LSF Q D+A RN L     + I S++D L+S
Sbjct:   470 VNENSKQIENNFIWNIGYNPSNMFTNLKDLSFSQTDSAIRNYLY----FDIISSIDSLKS 525

Query:   559 IAAHGGERRLLKQNRY-LD--FVQRWNLFKYKLDKAVTAL-SHMDF-EMALYYLRSSD-H 612
             I  H G+    ++  + +D   V+  + F   ++  +T + S++   + +  Y R +   
Sbjct:   526 IMDHIGDDETWEEFTHSIDNPSVRSIDSFFKSINSTITQINSNLQLHQYSKAYDRINQLS 585

Query:   613 DL-YTMHSLVHHATQELEASLVCFKDPPVPWASISMSAVVFLALSYVY-TKRDQLF 666
             DL   + S++H       + L C K   +    IS+S    + + ++Y   R  LF
Sbjct:   586 DLAMNISSVIHKIHSSKHSYLECEKSTFLLSEFISISFTTIIVIYFLYKVLRKSLF 641


>TAIR|locus:2155846 [details] [associations]
            symbol:AT5G58100 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0010584 "pollen exine
            formation" evidence=IMP] [GO:0005794 "Golgi apparatus"
            evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            GO:GO:0005783 GO:GO:0005794 EMBL:CP002688 GO:GO:0010584
            IPI:IPI00547611 RefSeq:NP_200618.3 UniGene:At.27740 PRIDE:F4KDI6
            EnsemblPlants:AT5G58100.1 GeneID:835922 KEGG:ath:AT5G58100
            OMA:ERMRDLK Uniprot:F4KDI6
        Length = 945

 Score = 210 (79.0 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
 Identities = 76/330 (23%), Positives = 140/330 (42%)

Query:   264 FHGRPKSQKALLADLASLVWSAYQVLVVPSLRIPVY--FEN-SLIVQFIHIYGLEGADSS 320
             F     ++   LA L + +W + + ++ PS+    +  +E  S  + FI    +      
Sbjct:   538 FQNYTVARDTFLAHLGATLWGSMRHIISPSVADGAFHHYEKISFQLVFITQEKVRQIKQL 597

Query:   321 GLDWKSIERTFMDEANDNGLLVGDQSLNFRTYKVNFADCSVCSFAISKSINSYTSRFLFD 380
              +D K++    MD  +   LL+  Q   F  + +  ++    + A S +  +     L  
Sbjct:   598 PVDLKAL----MDGLSS--LLLPSQKPLFSQHMLTLSEDPALAMAFSVARRAAAVPLLLV 651

Query:   381 N--YTMIVSEYLDSKKLHQIMSELAEEFRRVAGIPEEDSGRVLPVYVFXXXXXXXXXXXR 438
             N  Y   V  YLDS  L   +  + +      G     S   L + +F           +
Sbjct:   652 NGTYRKTVRSYLDSSILQYQLQRVNDHTSLKGG--HAHSRSTLEIPIFWLISGDPLLIDK 709

Query:   439 FHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTHTRELERPLVGSILQSMWGVSPTHLL 498
              +Q+ A  +MV+ V++  S   S   CNGR +    R   +  + S+ + + G+ P HL+
Sbjct:   710 HYQAKALSNMVVVVQSEASSWESHLQCNGRSLLWDLRSPVKAAMASVAEHLAGLLPLHLV 769

Query:   499 WSSMHNNTLVDYTWSIGQTPFGPFSEISSLSFVQKDAARRNVLLTSLNYSISSAVDVLES 558
             +S  H + + D+TWS+G  PF   S+   LS  Q D   R+ ++T+L  SI +    +  
Sbjct:   770 YSVAHESAIEDWTWSVGCNPFSVTSQGWLLSQFQSDTIARSYMITALEESIQAVNSGIHL 829

Query:   559 IAAHGGERRLLK--QNRYLDFVQRWNLFKY 586
             +      ++  K  Q+R  + +   N +KY
Sbjct:   830 LRLERTNKKTFKLFQSRERELM---NKYKY 856

 Score = 107 (42.7 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
 Identities = 20/42 (47%), Positives = 28/42 (66%)

Query:   211 GESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGV 252
             G+ S    +CL  IW GK R+ +IDL AGP  +GP++ G+GV
Sbjct:   372 GDFSNLNAECLTDIWIGKGRWAFIDLTAGPFSWGPSVGGEGV 413


>DICTYBASE|DDB_G0285083 [details] [associations]
            symbol:DDB_G0285083 species:44689 "Dictyostelium
            discoideum" [GO:0030587 "sorocarp development" evidence=IMP]
            dictyBase:DDB_G0285083 EMBL:AAFI02000073 GO:GO:0030587
            RefSeq:XP_639997.1 EnsemblProtists:DDB0218668 GeneID:8624915
            KEGG:ddi:DDB_G0285083 eggNOG:NOG72312 InParanoid:Q54NS0 OMA:KEDRWIC
            ProtClustDB:CLSZ2846754 Uniprot:Q54NS0
        Length = 1020

 Score = 120 (47.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
 Identities = 29/138 (21%), Positives = 63/138 (45%)

Query:   414 EEDSGRVLPVYVFXXXXXXXXXXXRFHQSVAFRDMVIAVRTRNSQTVSDYSCNGRHVFTH 473
             +E+  + +P+++F           + HQ+ +  +MVIA++T    + S ++ N   +  +
Sbjct:   752 KENQVKYIPIFLFSISTNNSILIDKTHQAKSLSNMVIAIQTNVFSSNSTFTVNDNQLKYY 811

Query:   474 TRELERPLVGSILQSMWGVSPTHLLWSSMHNNTLVDYTWSIGQTPFGPFSEISSLSF--V 531
                    ++ +   ++ G+   H+ +S  H     ++ WS+G +P    +      F   
Sbjct:   812 PINPLSSILSATALNLGGLVGNHISYSEAHGAATSNWHWSVGDSPTSKTTTYPFTHFNEF 871

Query:   532 QKDAARRNVLLTSLNYSI 549
             Q+D   RN + +SL  SI
Sbjct:   872 QRDTIFRNYIASSLERSI 889

 Score = 86 (35.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
 Identities = 18/59 (30%), Positives = 35/59 (59%)

Query:   194 LLNLGSKAKNYAYSYSPGESSPGFTKCLGSIWTGKERYVWIDLGAGPVDYGPALSGDGV 252
             +L+ G++ +   Y Y+  E+ P     +   W   +R+ +IDL AGP ++GP++ G+G+
Sbjct:   405 ILDRGTRYEQL-YVYTAHEN-PIVENPMVDTWISHKRFAFIDLTAGPFEWGPSVGGNGL 461


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.133   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      673       566   0.00079  120 3  11 22  0.37    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  331 KB (2167 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  42.72u 0.14s 42.86t   Elapsed:  00:00:02
  Total cpu time:  42.72u 0.14s 42.86t   Elapsed:  00:00:02
  Start:  Fri May 10 12:16:39 2013   End:  Fri May 10 12:16:41 2013

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