Query 005855
Match_columns 673
No_of_seqs 398 out of 2740
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 09:15:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005855.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005855hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t5t_A Putative glycosyltransf 100.0 5E-106 2E-110 897.2 49.6 453 93-565 2-476 (496)
2 1uqt_A Alpha, alpha-trehalose- 100.0 7E-93 2.4E-97 796.3 44.7 449 94-562 2-454 (482)
3 3fro_A GLGA glycogen synthase; 100.0 7.1E-28 2.4E-32 261.6 33.5 314 211-564 99-432 (439)
4 3vue_A GBSS-I, granule-bound s 100.0 1.3E-26 4.4E-31 263.0 30.4 298 230-562 152-511 (536)
5 2qzs_A Glycogen synthase; glyc 99.9 3.1E-25 1.1E-29 246.3 32.9 301 231-565 129-479 (485)
6 3c48_A Predicted glycosyltrans 99.9 2.7E-25 9.2E-30 242.7 28.7 295 231-565 122-428 (438)
7 1rzu_A Glycogen synthase 1; gl 99.9 6.4E-25 2.2E-29 243.7 31.6 300 231-564 130-477 (485)
8 2r60_A Glycosyl transferase, g 99.9 1.7E-25 5.7E-30 249.8 25.5 303 231-565 120-462 (499)
9 3okp_A GDP-mannose-dependent a 99.9 7.8E-25 2.7E-29 234.5 27.7 282 231-563 86-380 (394)
10 2x6q_A Trehalose-synthase TRET 99.9 6.6E-25 2.3E-29 238.6 24.5 280 231-562 126-414 (416)
11 3s28_A Sucrose synthase 1; gly 99.9 4.3E-25 1.5E-29 260.1 23.3 312 231-562 407-769 (816)
12 3oy2_A Glycosyltransferase B73 99.9 3.2E-24 1.1E-28 232.7 26.9 283 231-565 81-393 (413)
13 2gek_A Phosphatidylinositol ma 99.9 2.6E-24 8.8E-29 231.7 25.5 276 231-565 107-386 (406)
14 2jjm_A Glycosyl transferase, g 99.9 3.5E-24 1.2E-28 231.1 25.6 280 231-564 99-387 (394)
15 3nb0_A Glycogen [starch] synth 99.9 1.9E-22 6.7E-27 229.2 36.2 313 231-565 181-636 (725)
16 2bfw_A GLGA glycogen synthase; 99.9 5.1E-22 1.7E-26 193.9 21.6 190 331-546 2-199 (200)
17 2iuy_A Avigt4, glycosyltransfe 99.9 1E-22 3.5E-27 215.5 17.5 239 231-564 84-337 (342)
18 2iw1_A Lipopolysaccharide core 99.9 3.1E-23 1.1E-27 220.8 13.1 229 287-562 136-371 (374)
19 3qhp_A Type 1 capsular polysac 99.8 4.4E-20 1.5E-24 175.0 17.5 162 363-553 2-165 (166)
20 2x0d_A WSAF; GT4 family, trans 99.8 2.4E-19 8.1E-24 196.9 22.7 175 327-547 218-395 (413)
21 3beo_A UDP-N-acetylglucosamine 99.8 1.7E-18 5.7E-23 184.7 20.4 270 231-557 95-371 (375)
22 2hy7_A Glucuronosyltransferase 99.8 4E-19 1.4E-23 194.3 14.7 240 231-558 124-373 (406)
23 1vgv_A UDP-N-acetylglucosamine 99.8 6.8E-18 2.3E-22 180.8 23.9 274 232-558 87-372 (384)
24 2f9f_A First mannosyl transfer 99.7 6.7E-18 2.3E-22 162.9 13.0 142 361-529 21-164 (177)
25 2vsy_A XCC0866; transferase, g 99.7 2.1E-16 7.2E-21 178.8 18.0 199 326-564 344-561 (568)
26 1v4v_A UDP-N-acetylglucosamine 99.7 1.3E-15 4.4E-20 163.0 20.2 253 225-538 86-344 (376)
27 2xci_A KDO-transferase, 3-deox 99.6 1.8E-15 6.3E-20 163.6 17.9 250 225-546 106-363 (374)
28 1f0k_A MURG, UDP-N-acetylgluco 99.6 2.9E-15 1E-19 159.1 18.1 249 231-562 96-357 (364)
29 3dzc_A UDP-N-acetylglucosamine 99.5 2.3E-12 7.7E-17 140.5 22.3 263 225-540 106-379 (396)
30 3ot5_A UDP-N-acetylglucosamine 99.4 9E-12 3.1E-16 136.1 21.1 260 225-542 109-375 (403)
31 3rhz_A GTF3, nucleotide sugar 99.0 1.1E-08 3.8E-13 109.2 21.1 244 224-553 67-327 (339)
32 4hwg_A UDP-N-acetylglucosamine 98.9 5E-08 1.7E-12 105.9 19.0 245 225-529 89-344 (385)
33 2gj4_A Glycogen phosphorylase, 98.6 5.9E-06 2E-10 96.2 27.2 151 362-521 549-710 (824)
34 1l5w_A Maltodextrin phosphoryl 98.6 3E-07 1E-11 106.6 15.6 150 362-519 525-685 (796)
35 3otg_A CALG1; calicheamicin, T 98.6 5E-07 1.7E-11 97.2 15.8 158 362-559 242-407 (412)
36 2c4m_A Glycogen phosphorylase; 98.6 4.7E-06 1.6E-10 96.7 24.3 151 362-519 515-678 (796)
37 3tsa_A SPNG, NDP-rhamnosyltran 98.4 1.5E-06 5.1E-11 92.9 14.2 155 363-556 219-384 (391)
38 4fzr_A SSFS6; structural genom 98.4 3.6E-06 1.2E-10 90.4 16.5 100 441-553 286-393 (398)
39 3q3e_A HMW1C-like glycosyltran 98.3 1.2E-05 4E-10 91.5 16.6 171 363-562 441-623 (631)
40 3s2u_A UDP-N-acetylglucosamine 98.1 9.9E-05 3.4E-09 79.0 18.7 149 364-546 182-342 (365)
41 2iyf_A OLED, oleandomycin glyc 98.0 3.4E-05 1.2E-09 83.6 11.9 102 441-555 285-394 (430)
42 1u02_A Trehalose-6-phosphate p 97.9 1E-05 3.4E-10 81.5 7.0 58 592-660 2-59 (239)
43 2o6l_A UDP-glucuronosyltransfe 97.8 7.6E-05 2.6E-09 70.4 10.0 124 362-528 21-155 (170)
44 2fue_A PMM 1, PMMH-22, phospho 97.7 3.7E-05 1.3E-09 78.2 7.1 60 584-659 6-65 (262)
45 2p6p_A Glycosyl transferase; X 97.7 0.00055 1.9E-08 72.8 15.5 137 363-544 211-362 (384)
46 2amy_A PMM 2, phosphomannomuta 97.6 9.4E-05 3.2E-09 74.3 7.1 54 589-658 4-57 (246)
47 3pgv_A Haloacid dehalogenase-l 97.5 0.00011 3.7E-09 75.4 6.0 62 584-660 14-75 (285)
48 3f9r_A Phosphomannomutase; try 97.4 0.00021 7.2E-09 72.3 7.3 54 591-659 4-57 (246)
49 3dao_A Putative phosphatse; st 97.3 0.00033 1.1E-08 71.8 7.3 64 584-661 14-77 (283)
50 2yjn_A ERYCIII, glycosyltransf 97.2 0.0027 9.3E-08 69.0 14.1 150 363-555 268-430 (441)
51 3ia7_A CALG4; glycosysltransfe 97.2 0.0016 5.6E-08 69.0 11.8 106 441-559 283-397 (402)
52 1rkq_A Hypothetical protein YI 97.2 0.00035 1.2E-08 71.7 5.9 56 591-661 5-60 (282)
53 1nf2_A Phosphatase; structural 97.1 0.00045 1.5E-08 70.3 6.2 53 592-660 3-55 (268)
54 1xvi_A MPGP, YEDP, putative ma 97.1 0.00049 1.7E-08 70.4 5.9 56 590-660 8-63 (275)
55 1l6r_A Hypothetical protein TA 97.0 0.00042 1.4E-08 69.0 4.9 54 592-660 6-59 (227)
56 2b30_A Pvivax hypothetical pro 97.0 0.00061 2.1E-08 70.8 6.1 53 591-657 27-79 (301)
57 1rlm_A Phosphatase; HAD family 97.0 0.00054 1.9E-08 69.7 5.4 56 591-661 3-59 (271)
58 1wr8_A Phosphoglycolate phosph 97.0 0.00065 2.2E-08 67.4 5.8 54 592-660 4-57 (231)
59 4dw8_A Haloacid dehalogenase-l 97.0 0.00083 2.8E-08 68.1 6.6 56 591-661 5-60 (279)
60 3oti_A CALG3; calicheamicin, T 97.0 0.0031 1.1E-07 67.4 11.0 151 362-556 232-393 (398)
61 2obb_A Hypothetical protein; s 96.9 0.0011 3.8E-08 61.6 6.4 59 591-660 3-64 (142)
62 3rsc_A CALG2; TDP, enediyne, s 96.9 0.0093 3.2E-07 63.8 14.2 106 441-559 299-412 (415)
63 3mpo_A Predicted hydrolase of 96.8 0.00094 3.2E-08 67.7 5.5 56 591-661 5-60 (279)
64 3dnp_A Stress response protein 96.8 0.0013 4.3E-08 67.1 6.0 55 591-660 6-60 (290)
65 3l7y_A Putative uncharacterize 96.8 0.0015 5.1E-08 67.6 6.4 57 590-661 36-93 (304)
66 2zos_A MPGP, mannosyl-3-phosph 96.7 0.0011 3.9E-08 66.6 5.0 52 592-660 3-54 (249)
67 3fzq_A Putative hydrolase; YP_ 96.7 0.0011 3.9E-08 66.6 4.5 56 591-661 5-60 (274)
68 2rbk_A Putative uncharacterize 96.6 0.001 3.5E-08 67.1 3.5 53 592-659 3-55 (261)
69 3zx4_A MPGP, mannosyl-3-phosph 96.5 0.0021 7.2E-08 64.7 5.5 49 593-658 2-50 (259)
70 3r4c_A Hydrolase, haloacid deh 96.5 0.0025 8.6E-08 64.1 5.7 55 591-660 12-66 (268)
71 1nrw_A Hypothetical protein, h 96.5 0.0036 1.2E-07 64.1 7.0 54 592-660 5-58 (288)
72 2wm8_A MDP-1, magnesium-depend 96.5 0.0048 1.6E-07 58.9 7.4 73 587-661 23-107 (187)
73 3h4t_A Glycosyltransferase GTF 96.4 0.14 4.7E-06 54.9 19.5 146 362-553 221-375 (404)
74 3gyg_A NTD biosynthesis operon 96.4 0.0019 6.5E-08 66.0 4.0 61 590-659 21-81 (289)
75 2pq0_A Hypothetical conserved 96.3 0.0038 1.3E-07 62.5 5.5 55 591-660 3-57 (258)
76 1s2o_A SPP, sucrose-phosphatas 96.2 0.0022 7.6E-08 64.3 3.6 51 592-659 4-54 (244)
77 1xpj_A Hypothetical protein; s 96.2 0.0052 1.8E-07 55.4 5.6 50 592-650 2-51 (126)
78 3l8h_A Putative haloacid dehal 95.9 0.009 3.1E-07 56.1 5.9 53 592-650 2-54 (179)
79 4gyw_A UDP-N-acetylglucosamine 95.9 0.16 5.4E-06 59.2 17.3 173 364-565 524-708 (723)
80 1iir_A Glycosyltransferase GTF 95.6 0.06 2.1E-06 57.8 11.9 122 362-527 238-368 (415)
81 2p9j_A Hypothetical protein AQ 95.5 0.0083 2.9E-07 55.6 3.9 66 591-661 9-74 (162)
82 1k1e_A Deoxy-D-mannose-octulos 95.4 0.0087 3E-07 56.9 3.6 66 591-661 8-73 (180)
83 2oda_A Hypothetical protein ps 95.2 0.036 1.2E-06 53.6 7.3 67 590-658 5-71 (196)
84 2iya_A OLEI, oleandomycin glyc 95.0 0.41 1.4E-05 51.1 15.8 93 441-547 307-407 (424)
85 2pr7_A Haloacid dehalogenase/e 95.0 0.013 4.3E-07 52.0 3.1 51 592-658 3-53 (137)
86 3qgm_A P-nitrophenyl phosphata 94.8 0.025 8.5E-07 56.7 5.2 53 591-659 8-63 (268)
87 2gmw_A D,D-heptose 1,7-bisphos 94.6 0.052 1.8E-06 52.8 6.8 53 591-650 25-77 (211)
88 3ib6_A Uncharacterized protein 94.5 0.074 2.5E-06 50.6 7.6 69 592-661 4-75 (189)
89 2r8e_A 3-deoxy-D-manno-octulos 94.5 0.035 1.2E-06 53.0 5.3 66 587-661 22-91 (188)
90 2i33_A Acid phosphatase; HAD s 94.4 0.022 7.6E-07 57.9 3.8 67 590-657 58-138 (258)
91 2fpr_A Histidine biosynthesis 94.2 0.055 1.9E-06 51.2 5.9 56 589-648 12-67 (176)
92 3pdw_A Uncharacterized hydrola 94.0 0.03 1E-06 56.1 3.8 53 591-659 6-61 (266)
93 3epr_A Hydrolase, haloacid deh 93.6 0.05 1.7E-06 54.5 4.5 54 591-660 5-61 (264)
94 1rrv_A Glycosyltransferase GTF 93.6 0.24 8.2E-06 53.0 10.1 136 362-543 237-383 (416)
95 3e8m_A Acylneuraminate cytidyl 92.9 0.11 3.8E-06 47.9 5.4 66 591-661 4-69 (164)
96 3mmz_A Putative HAD family hyd 92.8 0.043 1.5E-06 52.0 2.4 66 591-661 12-77 (176)
97 1vjr_A 4-nitrophenylphosphatas 92.6 0.11 3.9E-06 51.8 5.4 54 591-660 17-73 (271)
98 4amg_A Snogd; transferase, pol 92.4 0.15 5.3E-06 53.7 6.4 88 444-546 292-385 (400)
99 1zjj_A Hypothetical protein PH 92.4 0.056 1.9E-06 54.2 2.8 44 592-651 2-45 (263)
100 3nvb_A Uncharacterized protein 92.1 0.17 5.9E-06 54.4 6.2 80 579-659 210-292 (387)
101 2i7d_A 5'(3')-deoxyribonucleot 91.8 0.12 4.1E-06 49.2 4.1 39 620-658 71-109 (193)
102 2x4d_A HLHPP, phospholysine ph 91.5 0.19 6.5E-06 49.4 5.4 57 591-659 12-71 (271)
103 3n1u_A Hydrolase, HAD superfam 91.3 0.093 3.2E-06 50.4 2.8 64 590-661 18-84 (191)
104 2o2x_A Hypothetical protein; s 91.1 0.14 4.6E-06 49.9 3.8 53 591-650 31-83 (218)
105 2hx1_A Predicted sugar phospha 91.0 0.2 6.9E-06 50.6 5.2 55 590-660 13-70 (284)
106 2oyc_A PLP phosphatase, pyrido 91.0 0.19 6.6E-06 51.5 5.1 53 591-659 21-76 (306)
107 2c4n_A Protein NAGD; nucleotid 90.6 0.25 8.4E-06 47.6 5.2 52 592-659 4-58 (250)
108 3n07_A 3-deoxy-D-manno-octulos 89.9 0.46 1.6E-05 45.8 6.4 67 590-661 24-90 (195)
109 3mn1_A Probable YRBI family ph 89.0 0.17 5.8E-06 48.3 2.5 67 590-661 18-84 (189)
110 3ocu_A Lipoprotein E; hydrolas 88.8 0.084 2.9E-06 53.8 0.2 69 589-659 56-141 (262)
111 2ho4_A Haloacid dehalogenase-l 88.5 0.62 2.1E-05 45.6 6.4 52 591-658 7-61 (259)
112 2b82_A APHA, class B acid phos 87.9 0.19 6.6E-06 49.0 2.1 60 591-651 37-116 (211)
113 2no4_A (S)-2-haloacid dehaloge 87.8 0.43 1.5E-05 46.3 4.5 38 622-660 105-142 (240)
114 3pct_A Class C acid phosphatas 87.1 0.39 1.3E-05 48.8 3.9 71 589-660 56-142 (260)
115 3ij5_A 3-deoxy-D-manno-octulos 86.9 0.27 9.3E-06 48.1 2.5 67 590-661 48-114 (211)
116 1yv9_A Hydrolase, haloacid deh 86.7 0.53 1.8E-05 46.7 4.5 49 591-655 5-53 (264)
117 3fvv_A Uncharacterized protein 86.6 1.2 4.1E-05 42.8 7.0 39 622-661 92-130 (232)
118 4eze_A Haloacid dehalogenase-l 86.5 0.33 1.1E-05 50.6 3.1 40 621-661 178-217 (317)
119 3zvl_A Bifunctional polynucleo 86.1 0.97 3.3E-05 48.9 6.6 58 589-649 56-113 (416)
120 1psw_A ADP-heptose LPS heptosy 85.2 7.3 0.00025 40.0 12.7 96 364-483 182-280 (348)
121 3m9l_A Hydrolase, haloacid deh 84.4 0.87 3E-05 42.9 4.7 40 621-661 69-108 (205)
122 1qq5_A Protein (L-2-haloacid d 84.4 1.2 4.1E-05 43.6 5.9 36 622-660 93-128 (253)
123 3ewi_A N-acylneuraminate cytid 84.4 0.74 2.5E-05 43.4 4.1 63 589-658 7-69 (168)
124 2w43_A Hypothetical 2-haloalka 83.9 0.54 1.8E-05 44.2 2.9 36 622-660 74-109 (201)
125 1zrn_A L-2-haloacid dehalogena 83.2 0.99 3.4E-05 43.2 4.6 38 622-660 95-132 (232)
126 1ygp_A Yeast glycogen phosphor 83.1 28 0.00096 40.8 17.1 148 362-518 599-767 (879)
127 2hhl_A CTD small phosphatase-l 83.0 0.93 3.2E-05 43.8 4.3 71 588-660 25-104 (195)
128 3kc2_A Uncharacterized protein 81.9 1.4 4.7E-05 46.7 5.4 44 590-649 12-55 (352)
129 2ght_A Carboxy-terminal domain 81.7 1.2 4E-05 42.5 4.3 70 589-660 13-91 (181)
130 2pib_A Phosphorylated carbohyd 81.7 2.4 8.1E-05 39.4 6.5 39 621-660 83-121 (216)
131 2hcf_A Hydrolase, haloacid deh 81.5 0.71 2.4E-05 44.1 2.8 55 591-659 4-60 (234)
132 3nuq_A Protein SSM1, putative 81.2 2.4 8.1E-05 42.2 6.7 38 621-659 141-180 (282)
133 3um9_A Haloacid dehalogenase, 80.5 2.7 9.1E-05 39.8 6.5 38 621-659 95-132 (230)
134 3u26_A PF00702 domain protein; 77.9 2.3 7.9E-05 40.4 5.2 38 621-660 99-136 (234)
135 3umb_A Dehalogenase-like hydro 77.2 2.4 8.4E-05 40.2 5.1 39 621-660 98-136 (233)
136 3a1c_A Probable copper-exporti 77.0 3.1 0.00011 42.0 6.1 68 581-660 133-200 (287)
137 3kzx_A HAD-superfamily hydrola 70.6 1.9 6.3E-05 41.2 2.4 46 591-651 25-71 (231)
138 1ltq_A Polynucleotide kinase; 64.6 16 0.00056 36.6 8.2 57 591-650 159-215 (301)
139 3p96_A Phosphoserine phosphata 64.1 4.3 0.00015 43.4 3.8 39 621-660 255-293 (415)
140 2pke_A Haloacid delahogenase-l 63.5 2.9 0.0001 40.5 2.2 15 591-605 13-27 (251)
141 3qle_A TIM50P; chaperone, mito 63.0 5.6 0.00019 38.7 4.0 65 589-661 32-96 (204)
142 1te2_A Putative phosphatase; s 62.7 2 7E-05 40.2 0.8 48 591-652 9-58 (226)
143 2wf7_A Beta-PGM, beta-phosphog 60.2 2.6 8.8E-05 39.5 1.0 14 592-605 3-16 (221)
144 1l7m_A Phosphoserine phosphata 60.1 3.5 0.00012 38.2 2.0 36 622-658 76-111 (211)
145 2go7_A Hydrolase, haloacid deh 59.9 2.5 8.4E-05 38.9 0.8 14 592-605 5-18 (207)
146 3ddh_A Putative haloacid dehal 59.0 3.2 0.00011 39.0 1.5 15 591-605 8-22 (234)
147 3d6j_A Putative haloacid dehal 58.6 2.4 8.4E-05 39.7 0.6 15 591-605 6-20 (225)
148 3m1y_A Phosphoserine phosphata 58.2 3.9 0.00013 38.3 2.0 39 621-660 74-112 (217)
149 3ef0_A RNA polymerase II subun 57.6 11 0.00037 40.1 5.5 76 582-659 9-110 (372)
150 2om6_A Probable phosphoserine 56.8 3.4 0.00012 39.0 1.3 14 592-605 5-18 (235)
151 3i28_A Epoxide hydrolase 2; ar 56.8 6.1 0.00021 42.4 3.4 34 622-656 100-139 (555)
152 2fi1_A Hydrolase, haloacid deh 54.7 4.3 0.00015 37.2 1.5 35 623-659 83-117 (190)
153 3shq_A UBLCP1; phosphatase, hy 54.5 13 0.00043 38.8 5.2 60 590-658 139-198 (320)
154 3cnh_A Hydrolase family protei 54.4 4.4 0.00015 37.6 1.6 13 592-604 5-17 (200)
155 1q92_A 5(3)-deoxyribonucleotid 53.8 5.1 0.00018 37.7 2.0 32 621-652 74-105 (197)
156 3e58_A Putative beta-phosphogl 53.8 4.5 0.00015 37.3 1.6 39 622-661 89-127 (214)
157 3hbm_A UDP-sugar hydrolase; PS 53.1 15 0.0005 37.5 5.4 33 451-492 217-249 (282)
158 3kd3_A Phosphoserine phosphohy 53.0 5 0.00017 37.2 1.7 37 622-659 82-118 (219)
159 3dv9_A Beta-phosphoglucomutase 51.8 7 0.00024 37.2 2.6 37 621-658 107-143 (247)
160 2p11_A Hypothetical protein; p 51.7 5.8 0.0002 38.1 2.0 37 621-659 95-131 (231)
161 3mc1_A Predicted phosphatase, 51.2 5.2 0.00018 37.6 1.6 38 622-660 86-123 (226)
162 3nas_A Beta-PGM, beta-phosphog 50.9 5.3 0.00018 37.9 1.6 27 623-650 93-119 (233)
163 1rku_A Homoserine kinase; phos 50.6 5.7 0.00019 37.1 1.7 38 621-660 68-105 (206)
164 2fdr_A Conserved hypothetical 50.3 5.7 0.0002 37.4 1.7 34 623-660 88-121 (229)
165 2b0c_A Putative phosphatase; a 50.1 4.7 0.00016 37.4 1.0 32 621-653 90-121 (206)
166 1nnl_A L-3-phosphoserine phosp 49.8 5.6 0.00019 37.8 1.5 40 621-661 85-124 (225)
167 4ex6_A ALNB; modified rossman 49.7 6.5 0.00022 37.4 2.0 38 622-660 104-141 (237)
168 3ed5_A YFNB; APC60080, bacillu 49.6 5.7 0.0002 37.5 1.6 38 621-660 102-139 (238)
169 4ap9_A Phosphoserine phosphata 49.5 6.1 0.00021 36.2 1.7 35 621-656 78-112 (201)
170 3qnm_A Haloacid dehalogenase-l 49.4 5.7 0.0002 37.5 1.5 37 621-659 106-142 (240)
171 2i6x_A Hydrolase, haloacid deh 49.0 4.9 0.00017 37.5 0.9 13 592-604 6-18 (211)
172 3qxg_A Inorganic pyrophosphata 48.3 6.1 0.00021 37.9 1.6 37 621-658 108-144 (243)
173 2fea_A 2-hydroxy-3-keto-5-meth 48.2 7.2 0.00025 37.6 2.1 37 621-658 76-112 (236)
174 3smv_A S-(-)-azetidine-2-carbo 48.0 6.2 0.00021 37.2 1.5 36 622-659 99-134 (240)
175 1y8a_A Hypothetical protein AF 47.6 6.6 0.00023 40.5 1.8 40 590-650 20-59 (332)
176 1swv_A Phosphonoacetaldehyde h 47.1 6.6 0.00023 38.2 1.6 36 622-658 103-138 (267)
177 3vay_A HAD-superfamily hydrola 47.0 6.9 0.00023 36.9 1.7 28 622-651 105-132 (230)
178 4dcc_A Putative haloacid dehal 46.6 6.8 0.00023 37.3 1.6 31 622-654 112-142 (229)
179 3l5k_A Protein GS1, haloacid d 46.3 6.7 0.00023 37.8 1.5 37 621-658 111-147 (250)
180 3iru_A Phoshonoacetaldehyde hy 46.3 6.9 0.00023 38.0 1.6 37 622-659 111-147 (277)
181 1qkk_A DCTD, C4-dicarboxylate 46.1 1.2E+02 0.0041 26.2 9.9 78 449-526 35-120 (155)
182 3umg_A Haloacid dehalogenase; 46.1 7 0.00024 37.3 1.6 37 622-660 116-152 (254)
183 3kcn_A Adenylate cyclase homol 45.9 1.1E+02 0.0039 26.3 9.7 78 449-526 35-122 (151)
184 2hoq_A Putative HAD-hydrolase 45.2 7.3 0.00025 37.4 1.6 38 622-660 94-131 (241)
185 3s6j_A Hydrolase, haloacid deh 45.2 6.6 0.00023 36.9 1.2 39 621-660 90-128 (233)
186 3tov_A Glycosyl transferase fa 45.0 1.8E+02 0.0062 29.8 12.5 92 363-482 186-279 (349)
187 3bwv_A Putative 5'(3')-deoxyri 44.9 7.8 0.00027 35.7 1.7 26 621-648 68-93 (180)
188 3hzh_A Chemotaxis response reg 44.7 1.1E+02 0.0038 26.7 9.5 78 449-526 69-156 (157)
189 3umc_A Haloacid dehalogenase; 43.7 7.2 0.00025 37.4 1.2 37 622-660 120-156 (254)
190 2hdo_A Phosphoglycolate phosph 43.0 7.5 0.00025 36.2 1.2 12 592-603 5-16 (209)
191 3jte_A Response regulator rece 42.9 85 0.0029 26.7 8.2 78 449-526 35-122 (143)
192 4eek_A Beta-phosphoglucomutase 42.4 8.1 0.00028 37.4 1.4 39 621-660 109-147 (259)
193 2ah5_A COG0546: predicted phos 42.3 7.2 0.00025 36.8 1.0 36 622-659 84-119 (210)
194 2nyv_A Pgpase, PGP, phosphogly 41.6 8.1 0.00028 36.8 1.2 40 621-661 82-121 (222)
195 3sd7_A Putative phosphatase; s 41.6 8 0.00028 36.9 1.2 38 622-660 110-147 (240)
196 2hsz_A Novel predicted phospha 40.8 8.4 0.00029 37.3 1.2 38 622-660 114-151 (243)
197 2hi0_A Putative phosphoglycola 40.4 8.3 0.00028 37.1 1.1 38 622-660 110-147 (240)
198 3kbb_A Phosphorylated carbohyd 40.4 9.7 0.00033 35.7 1.6 13 592-604 2-14 (216)
199 2gfh_A Haloacid dehalogenase-l 39.8 9.9 0.00034 37.5 1.6 13 592-604 19-31 (260)
200 2zg6_A Putative uncharacterize 39.5 8.5 0.00029 36.5 1.0 36 622-659 95-130 (220)
201 1dbw_A Transcriptional regulat 39.5 1.1E+02 0.0036 25.4 8.1 79 449-527 35-121 (126)
202 3eul_A Possible nitrate/nitrit 39.4 90 0.0031 27.0 7.9 79 449-527 49-135 (152)
203 3rfu_A Copper efflux ATPase; a 39.4 26 0.0009 40.6 5.3 70 580-661 523-592 (736)
204 4gib_A Beta-phosphoglucomutase 39.1 10 0.00035 36.9 1.6 28 622-650 116-143 (250)
205 4e7p_A Response regulator; DNA 39.0 89 0.003 27.0 7.8 78 450-527 55-140 (150)
206 3a10_A Response regulator; pho 38.8 87 0.003 25.4 7.3 77 449-525 33-115 (116)
207 2pl1_A Transcriptional regulat 38.4 1E+02 0.0034 25.2 7.7 78 449-526 32-117 (121)
208 3n53_A Response regulator rece 38.2 89 0.003 26.5 7.6 78 449-526 34-121 (140)
209 4g9b_A Beta-PGM, beta-phosphog 36.4 12 0.00042 36.3 1.6 28 622-650 95-122 (243)
210 1tmy_A CHEY protein, TMY; chem 36.2 96 0.0033 25.3 7.2 77 449-525 35-119 (120)
211 2qv0_A Protein MRKE; structura 36.2 99 0.0034 26.2 7.5 78 449-526 43-126 (143)
212 2qlt_A (DL)-glycerol-3-phospha 35.7 11 0.00038 37.2 1.2 38 622-659 114-151 (275)
213 2pln_A HP1043, response regula 35.5 1.5E+02 0.0052 24.8 8.7 74 449-526 50-132 (137)
214 2g80_A Protein UTR4; YEL038W, 35.5 13 0.00043 37.1 1.5 34 622-660 125-158 (253)
215 3b2n_A Uncharacterized protein 35.1 1.2E+02 0.004 25.5 7.8 78 449-526 37-122 (133)
216 3hv2_A Response regulator/HD d 35.0 59 0.002 28.3 5.9 78 449-526 46-132 (153)
217 2r25_B Osmosensing histidine p 34.7 2E+02 0.007 24.0 9.9 79 449-527 35-127 (133)
218 3f6c_A Positive transcription 34.3 80 0.0027 26.4 6.5 68 459-526 46-119 (134)
219 3j08_A COPA, copper-exporting 34.1 42 0.0014 38.2 5.8 70 580-661 426-495 (645)
220 3eod_A Protein HNR; response r 34.1 89 0.0031 26.0 6.8 78 449-526 39-125 (130)
221 3k1z_A Haloacid dehalogenase-l 34.0 13 0.00043 36.5 1.2 36 622-659 106-141 (263)
222 1mvo_A PHOP response regulator 33.6 1.4E+02 0.0048 24.9 8.1 79 449-527 35-121 (136)
223 2zay_A Response regulator rece 33.5 1.4E+02 0.0048 25.4 8.1 78 449-526 40-127 (147)
224 3cnb_A DNA-binding response re 33.3 1.3E+02 0.0045 25.2 7.9 79 449-527 42-130 (143)
225 3crn_A Response regulator rece 33.3 1E+02 0.0034 26.0 7.0 78 449-526 35-120 (132)
226 3hdv_A Response regulator; PSI 33.3 1.3E+02 0.0045 25.1 7.8 79 449-527 39-127 (136)
227 1qo0_D AMIR; binding protein, 33.1 2.3E+02 0.0078 25.6 10.0 67 459-526 52-124 (196)
228 3kto_A Response regulator rece 33.0 82 0.0028 26.7 6.4 67 460-526 51-125 (136)
229 3hdg_A Uncharacterized protein 33.0 67 0.0023 27.1 5.8 78 449-526 39-124 (137)
230 4dad_A Putative pilus assembly 32.8 68 0.0023 27.5 5.9 68 459-526 67-140 (146)
231 3kht_A Response regulator; PSI 32.4 1.1E+02 0.0038 26.0 7.2 78 449-526 39-127 (144)
232 1yns_A E-1 enzyme; hydrolase f 32.0 16 0.00054 36.2 1.6 37 621-658 129-165 (261)
233 3j09_A COPA, copper-exporting 31.9 58 0.002 37.5 6.6 71 579-661 503-573 (723)
234 3cfy_A Putative LUXO repressor 31.2 1.2E+02 0.0041 25.8 7.2 78 449-526 36-121 (137)
235 3cu5_A Two component transcrip 31.1 1.1E+02 0.0039 26.0 7.1 78 449-526 37-122 (141)
236 3skx_A Copper-exporting P-type 31.1 15 0.00051 35.8 1.2 39 622-661 144-182 (280)
237 3snk_A Response regulator CHEY 30.8 78 0.0027 26.7 5.9 67 460-526 60-132 (135)
238 1zgz_A Torcad operon transcrip 30.3 1.7E+02 0.0058 23.8 7.8 76 449-525 34-117 (122)
239 2rjn_A Response regulator rece 30.1 1.1E+02 0.0039 26.4 6.9 78 449-526 39-125 (154)
240 3gl9_A Response regulator; bet 30.0 1.8E+02 0.0061 24.0 8.0 78 449-526 34-121 (122)
241 3nhm_A Response regulator; pro 29.9 1.7E+02 0.0057 24.3 7.8 78 449-526 35-121 (133)
242 1srr_A SPO0F, sporulation resp 29.4 1.5E+02 0.0052 24.3 7.4 78 449-526 35-120 (124)
243 3h5i_A Response regulator/sens 29.1 2.4E+02 0.0083 23.7 8.9 77 449-526 37-123 (140)
244 2rdm_A Response regulator rece 28.2 2E+02 0.0068 23.6 8.0 80 449-528 37-124 (132)
245 2gt1_A Lipopolysaccharide hept 27.8 2E+02 0.0068 28.7 9.2 73 444-526 238-321 (326)
246 3cz5_A Two-component response 27.7 1.2E+02 0.0039 26.3 6.5 78 449-526 39-124 (153)
247 3gt7_A Sensor protein; structu 27.6 1.9E+02 0.0066 24.9 8.1 78 449-526 39-126 (154)
248 3h1g_A Chemotaxis protein CHEY 27.3 2.1E+02 0.0072 23.7 8.0 68 460-527 52-127 (129)
249 3r0j_A Possible two component 27.1 1.7E+02 0.0057 28.0 8.2 77 450-526 56-140 (250)
250 2qsj_A DNA-binding response re 27.1 1.3E+02 0.0046 25.8 6.9 78 449-527 37-124 (154)
251 1i3c_A Response regulator RCP1 27.1 2.9E+02 0.01 23.5 9.4 77 449-525 42-135 (149)
252 1xhf_A DYE resistance, aerobic 27.0 1.7E+02 0.0058 23.8 7.3 77 449-526 35-119 (123)
253 1k68_A Phytochrome response re 26.7 1.7E+02 0.0059 24.2 7.4 78 449-526 36-130 (140)
254 3cg4_A Response regulator rece 26.5 1.5E+02 0.0051 24.9 7.0 78 449-526 39-126 (142)
255 3skx_A Copper-exporting P-type 26.1 62 0.0021 31.2 4.8 22 582-603 115-136 (280)
256 3lte_A Response regulator; str 25.9 2E+02 0.007 23.6 7.7 79 449-527 38-125 (132)
257 2qr3_A Two-component system re 25.8 1.4E+02 0.0047 25.0 6.6 79 449-527 35-126 (140)
258 1jbe_A Chemotaxis protein CHEY 25.8 2.4E+02 0.0081 23.1 8.0 78 449-526 37-124 (128)
259 1k66_A Phytochrome response re 25.6 1.7E+02 0.0059 24.6 7.2 78 449-526 40-137 (149)
260 2qxy_A Response regulator; reg 25.1 1.2E+02 0.0042 25.6 6.1 79 449-527 36-121 (142)
261 3to5_A CHEY homolog; alpha(5)b 25.0 80 0.0027 28.0 4.9 38 489-526 90-132 (134)
262 3bwv_A Putative 5'(3')-deoxyri 24.8 92 0.0031 28.1 5.5 7 643-649 119-125 (180)
263 3a1c_A Probable copper-exporti 24.6 28 0.00096 34.7 1.9 16 591-606 32-47 (287)
264 3ilh_A Two component response 24.5 2.1E+02 0.0073 23.9 7.6 79 449-527 43-139 (146)
265 2qzj_A Two-component response 24.3 78 0.0027 27.0 4.6 77 449-526 36-120 (136)
266 4fe3_A Cytosolic 5'-nucleotida 24.3 30 0.001 34.8 2.0 39 621-660 140-178 (297)
267 2gkg_A Response regulator homo 24.1 2.2E+02 0.0075 23.0 7.4 80 449-528 37-126 (127)
268 2vch_A Hydroquinone glucosyltr 24.0 3.2E+02 0.011 29.3 10.5 108 445-562 344-470 (480)
269 1zh2_A KDP operon transcriptio 23.9 1.5E+02 0.0052 23.9 6.3 65 460-525 46-116 (121)
270 2jk1_A HUPR, hydrogenase trans 23.7 3.2E+02 0.011 22.8 9.2 78 449-526 32-118 (139)
271 1a04_A Nitrate/nitrite respons 23.7 2.1E+02 0.0073 26.2 8.0 78 449-526 39-124 (215)
272 3f6p_A Transcriptional regulat 23.2 1.7E+02 0.0058 24.0 6.5 77 449-526 34-118 (120)
273 3lua_A Response regulator rece 23.1 1E+02 0.0036 26.0 5.2 79 449-527 37-127 (140)
274 1yio_A Response regulatory pro 23.1 1.9E+02 0.0065 26.4 7.5 78 449-526 36-121 (208)
275 3t6k_A Response regulator rece 22.9 2.8E+02 0.0095 23.3 8.0 79 449-527 36-124 (136)
276 1dz3_A Stage 0 sporulation pro 22.7 1.2E+02 0.0042 25.2 5.5 80 449-528 36-124 (130)
277 1ys7_A Transcriptional regulat 22.6 2.5E+02 0.0085 26.0 8.3 77 449-525 39-123 (233)
278 3cg0_A Response regulator rece 22.5 2.2E+02 0.0076 23.6 7.3 77 449-526 42-127 (140)
279 3eqz_A Response regulator; str 22.3 1.4E+02 0.0049 24.6 5.9 69 460-528 47-126 (135)
280 1s8n_A Putative antiterminator 22.2 4.4E+02 0.015 23.8 9.9 77 449-526 46-130 (205)
281 3ef1_A RNA polymerase II subun 22.1 87 0.003 34.0 5.2 84 584-669 19-130 (442)
282 3c3m_A Response regulator rece 22.1 3.1E+02 0.011 22.9 8.2 80 449-528 35-124 (138)
283 2a9o_A Response regulator; ess 21.3 2.6E+02 0.009 22.3 7.3 77 449-526 33-117 (120)
284 1kgs_A DRRD, DNA binding respo 21.0 2.3E+02 0.0078 26.1 7.6 78 449-526 34-119 (225)
285 3i42_A Response regulator rece 20.8 2.5E+02 0.0085 23.0 7.1 78 449-526 35-121 (127)
286 3abz_A Beta-glucosidase I; gly 20.4 1.3E+02 0.0046 35.3 6.8 77 579-667 564-642 (845)
287 3heb_A Response regulator rece 20.4 2.7E+02 0.0094 23.7 7.6 77 449-525 38-133 (152)
No 1
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=100.00 E-value=5.5e-106 Score=897.18 Aligned_cols=453 Identities=23% Similarity=0.313 Sum_probs=403.6
Q ss_pred CCcEEEEEcCCCcceEec-CCCcE---EEEecCCcHHHhhcccccCCcEEEEeCCCCCCCchhhHHHHH----------h
Q 005855 93 RQRLLVVANRLPVSAIRR-GEDSW---SLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTK----------A 158 (673)
Q Consensus 93 ~~rlivvsnrlP~~~~~~-~~g~~---~~~~~~ggL~~~l~~~~~~~~~WvGw~g~~~~~~~~~~~~~~----------~ 158 (673)
.++||||||||||.++++ ++|+| .++.++||||+||.++. +|+||||+|... +.....+ .
T Consensus 2 ~~~livvsnR~P~~~~~~~~~g~~~~~~~~~s~GGLv~al~~~~--~~~Wvgw~~~~~----~~~~~~~~~~~~~~~~~~ 75 (496)
T 3t5t_A 2 GSEIFLASKRAAITYDTDPATGEPRAWLAPGGTGNVVAEQAGVL--NISWIASADSED----DRRASALNPDGVTMELHS 75 (496)
T ss_dssp --CEEEEESCCCEEEEECTTTCSEEEEECSSHHHHHHHHHHHHH--TCCEEEECCSHH----HHHHHHHCTTCEEEECTT
T ss_pred CCCEEEEECCCCeeEEEecCCCceeeeeeccCCCchHHHHhhhc--CCEEEecCCCcc----chhhhhcccccccccccc
Confidence 468999999999999988 68887 67889999999999987 899999998532 1222221 2
Q ss_pred hcCceEEEEecChHHHHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhc--CCCCEE
Q 005855 159 LAEKRCIPVFLDEDIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHY--KDGDVV 235 (673)
Q Consensus 159 ~~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~--~~~DvV 235 (673)
..+++|+||+|+++++++||+||||++|||+|||+.+.+. .+. ...|+ ++|++|++||++||++|++.+ +++|+|
T Consensus 76 ~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWPl~H~~~~~~~-~p~-~~~~~~~~w~~Y~~vN~~fA~~i~~~~~~~~~D~V 153 (496)
T 3t5t_A 76 GREILVRLIRHDPAVFRNVQNFMTANLMWAANNYGWDRWT-QPS-FGSDAREGWADFGRFTRDFADAILKSSAQSADPVY 153 (496)
T ss_dssp SCEEEEEEECCCHHHHHHHHHHHSTTTHHHHHTTCCCSSS-CCC-BCHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSCEE
T ss_pred CCCeEEEEEeCCHHHHHHHHHHhHhhhcchhhccccccCC-CCc-cchhhHHHHHHHHHHHHHHHHHHHHHhccCCCCEE
Confidence 4679999999999999999999999999999999843220 000 12344 569999999999999999999 589999
Q ss_pred EEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCC--cchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh-cc
Q 005855 236 WCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLP--SRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL-GF 312 (673)
Q Consensus 236 wvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp--~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l-~~ 312 (673)
|||||||+++|++||+++|+++||||||||||++|+|++|| ||++|++|||+||+|||||++|++||+++|++++ |+
T Consensus 154 wVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs~e~f~~Lp~~~r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~ 233 (496)
T 3t5t_A 154 LVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPKEIRTGILHGMLPATTIGFFADRWCRNFLESVADLLPDA 233 (496)
T ss_dssp EEESGGGTTHHHHHHHHCTTSCEEEECCSCCCCHHHHTTSCHHHHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTC
T ss_pred EEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCCHHHHhhCcHhHHHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999 7999999999999999999999999999999999 87
Q ss_pred ccC--CCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 005855 313 EGT--PEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (673)
Q Consensus 313 ~~~--~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~ 390 (673)
+.. ...++++|+.++|.++|+|||++.|.+... ++ .++++++++++++|++|||||+.||+..+|+|| +|++
T Consensus 234 ~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~--~~---~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Af-~ll~ 307 (496)
T 3t5t_A 234 RIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNP--QL---PEGIEEWADGHRLVVHSGRTDPIKNAERAVRAF-VLAA 307 (496)
T ss_dssp EEETTTTEEEETTEEEEEEECCCCBCGGGC----C--CC---CTTHHHHHTTSEEEEEEEESSGGGCHHHHHHHH-HHHH
T ss_pred cccccCCeEEECCEEEEEEEeccEeCHHHhchhhH--HH---HHHHHHHhCCceEEEEcccCccccCHHHHHHHH-HHHH
Confidence 653 457899999999999999999999987643 11 145777888999999999999999999999999 9999
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCc
Q 005855 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRD 470 (673)
Q Consensus 391 ~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~E 470 (673)
++|+++ +++|||||.|+++++++|+++++++++++++||++||+. ||+|+ +.++.+++.++|++|||||+||++|
T Consensus 308 ~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~f~-g~v~~~el~aly~~ADv~vv~SlrE 382 (496)
T 3t5t_A 308 RGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVRID-NDNDVNHTIACFRRADLLIFNSTVD 382 (496)
T ss_dssp HTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEEEE-ECCCHHHHHHHHHHCSEEEECCSSB
T ss_pred hCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEEEe-CCCCHHHHHHHHHhccEEEECcccc
Confidence 999999 999999999999999999999999999999999999875 78865 6889999999999999999999999
Q ss_pred CCChhHHHHHhhccCCCceEEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHH
Q 005855 471 GMNLVSYEFVACQDLKKGVLILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQE 550 (673)
Q Consensus 471 Gf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~ 550 (673)
|||||++|||||+ +++||+|+|+++|++++++.+|++|||+|++++|+||.++|+|+++||++|+++++++|++||+..
T Consensus 383 GfgLv~~EamA~~-~~~g~lVlSe~aGa~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~~d~~~ 461 (496)
T 3t5t_A 383 GQNLSTFEAPLVN-ERDADVILSETCGAAEVLGEYCRSVNPFDLVEQAEAISAALAAGPRQRAEAAARRRDAARPWTLEA 461 (496)
T ss_dssp SCCSHHHHHHHHC-SSCCEEEEETTBTTHHHHGGGSEEECTTBHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCBHHH
T ss_pred cCChhHHHHHHhC-CCCCCEEEeCCCCCHHHhCCCEEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCHHH
Confidence 9999999999996 467999999999999999778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHH
Q 005855 551 WAETFVSELNDTVVE 565 (673)
Q Consensus 551 W~~~fl~~L~~~~~~ 565 (673)
|+++||++|..+...
T Consensus 462 W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 462 WVQAQLDGLAADHAA 476 (496)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccc
Confidence 999999999887544
No 2
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=100.00 E-value=7e-93 Score=796.30 Aligned_cols=449 Identities=35% Similarity=0.625 Sum_probs=406.9
Q ss_pred CcEEEEEcCCCcceEecCCCcEEEEecCCcHHHhhccc-ccCCcEEEEeCCCCCCCchhhHHHHHhhcCceEEEEecChH
Q 005855 94 QRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGV-KEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDED 172 (673)
Q Consensus 94 ~rlivvsnrlP~~~~~~~~g~~~~~~~~ggL~~~l~~~-~~~~~~WvGw~g~~~~~~~~~~~~~~~~~~~~~~pV~l~~~ 172 (673)
+||||||||+|+.. + .+.++|||++||.++ +..+++||||+|.. +++ ++...+....+++|+||||+++
T Consensus 2 ~~livvsnr~p~~~----~----~~~~~ggl~~~l~~~~~~~~~~wvgw~g~~-~~~-~~~~~~~~~~~~~~~~v~l~~~ 71 (482)
T 1uqt_A 2 SRLVVVSNRIAPPD----E----HAASAGGLAVGILGALKAAGGLWFGWSGET-GNE-DQPLKKVKKGNITWASFNLSEQ 71 (482)
T ss_dssp CCEEEEEEECCCCC------------CCCHHHHHHHHHHHHHCEEEEEEEEEE-SCC-SSCCEEEEETTEEEEEEEECHH
T ss_pred CCEEEEECCCCCCC----C----CCcCCCcHHHHHHHHHhhCCCEEEeCCCCC-Ccc-cchhhhhccCCceEEEEECCHH
Confidence 68999999999972 1 146899999999998 77899999999965 221 1111112246899999999999
Q ss_pred HHHHHHHHHHHHhhHhhhcCCCCCccccccccchhH-HHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCccchhHHHHHHh
Q 005855 173 IVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQ-SQFAAYIKANQMFADVVNKHYKDGDVVWCHDYHLMFLPKCLKE 251 (673)
Q Consensus 173 ~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~-~~w~~Y~~vN~~fA~~i~~~~~~~DvVwvHDyhl~llp~~Lr~ 251 (673)
++++||+||||++|||+|||..... .|+ .+|.+|.++|+.||+++.+.++++|+|||||||++++|.++|+
T Consensus 72 ~~~~~y~gf~~~~lWp~~H~~~~~~--------~~~~~~w~~y~~vN~~fa~~l~~~~~~~DiV~vHdyhl~~l~~~lr~ 143 (482)
T 1uqt_A 72 DLDEYYNQFSNAVLWPAFHYRLDLV--------QFQRPAWDGYLRVNALLADKLLPLLQDDDIIWIHDYHLLPFAHELRK 143 (482)
T ss_dssp HHHHHTTTHHHHTHHHHHTTCGGGC--------CCCHHHHHHHHHHHHHHHHHHGGGCCTTCEEEEESGGGTTHHHHHHH
T ss_pred HHHHHHHHhhhhhccccccCcCCcc--------ccCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECchHHHHHHHHHH
Confidence 9999999999999999999985322 366 5599999999999999999999999999999999999999999
Q ss_pred hCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCC-CceeeCCeeeEEEE
Q 005855 252 YNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTP-EGVEDQGRLTRVAA 330 (673)
Q Consensus 252 ~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~-~~i~~~gr~~~v~v 330 (673)
+.++++|+||+|+|||++++|+++|++++++++++++|+|+||++.|+++|+++|+++++.+... ..++++|+..+|.+
T Consensus 144 ~~~~~~i~~~~H~pfp~~~~~~~lp~~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~v 223 (482)
T 1uqt_A 144 RGVNNRIGFFLHIPFPTPEIFNALPTYDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEV 223 (482)
T ss_dssp TTCCSCEEEECCSCCCCHHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEE
T ss_pred hCCCCcEEEEEcCCCCCHHHHhhCccHHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999876543 34778899999999
Q ss_pred eecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCC
Q 005855 331 FPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRT 410 (673)
Q Consensus 331 iP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~ 410 (673)
+|+|||++.|.+....+++.+ .++++++++++++|++||||++.||+..+|+||++|++++|+++++++|+|||.|+++
T Consensus 224 ip~GID~~~f~~~~~~~~~~~-~~~lr~~~~~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~ 302 (482)
T 1uqt_A 224 YPIGIEPKEIAKQAAGPLPPK-LAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRG 302 (482)
T ss_dssp CCCCCCHHHHHHHHHSCCCHH-HHHHHHHTTTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCST
T ss_pred EeccCCHHHHHHHhcCcchHH-HHHHHHHhCCCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCcc
Confidence 999999999987655555544 6678888889999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhcc-CCCce
Q 005855 411 DVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQD-LKKGV 489 (673)
Q Consensus 411 ~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~-~~~g~ 489 (673)
++++|+++++++++++++||.+||..+|.||+|+.+.++++++.++|++|||||+||++||||||++||||||. +++||
T Consensus 303 ~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gp 382 (482)
T 1uqt_A 303 DVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGV 382 (482)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCE
T ss_pred chHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999983 45689
Q ss_pred EEEeCCCCchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 490 LILSEFAGAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 490 lVlSe~aG~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
+|+|+++|+++++ .+|++|||+|++++|++|.++|+|++++|+++++++++++++||++.|+++|++.|+++
T Consensus 383 vV~S~~~G~~~~l-~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 383 LVLSQFAGAANEL-TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp EEEETTBGGGGTC-TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred EEEECCCCCHHHh-CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 9999999999999 79999999999999999999999999999999999999999999999999999999876
No 3
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.96 E-value=7.1e-28 Score=261.60 Aligned_cols=314 Identities=19% Similarity=0.198 Sum_probs=236.5
Q ss_pred HHHHHHHHHHHHHHHHHh---cCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCch---hhhh--------cCC
Q 005855 211 FAAYIKANQMFADVVNKH---YKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS---EIHR--------TLP 276 (673)
Q Consensus 211 w~~Y~~vN~~fA~~i~~~---~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~---e~fr--------~lp 276 (673)
+..+....+.....+... -...|+||+|+++..+++.++++. .+.++.+.+|..++.. ..+. ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~-~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 177 (439)
T 3fro_A 99 IRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKY-FKIPAVFTIHRLNKSKLPAFYFHEAGLSELAPYP 177 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHH-HCCCEEEEESCCCCCCEEHHHHHHTTCGGGCCSS
T ss_pred hhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhc-cCCCEEEEecccccccCchHHhCccccccccccc
Confidence 334444444444444444 346799999999998888888744 6789999999987531 1111 111
Q ss_pred cchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHH
Q 005855 277 SRSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKEL 356 (673)
Q Consensus 277 ~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~l 356 (673)
........+..+|.|.+.+..+++.... .++.. ..++.++|+|||.+.|.+....+........+
T Consensus 178 ~~~~~~~~~~~ad~ii~~S~~~~~~~~~----~~~~~-----------~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~ 242 (439)
T 3fro_A 178 DIDPEHTGGYIADIVTTVSRGYLIDEWG----FFRNF-----------EGKITYVFNGIDCSFWNESYLTGSRDERKKSL 242 (439)
T ss_dssp EECHHHHHHHHCSEEEESCHHHHHHTHH----HHGGG-----------TTSEEECCCCCCTTTSCGGGSCSCHHHHHHHH
T ss_pred eeeHhhhhhhhccEEEecCHHHHHHHhh----hhhhc-----------CCceeecCCCCCchhcCcccccchhhhhHHHH
Confidence 1123344566899999999877766221 22111 34788999999999998763322233445566
Q ss_pred HHHh--cCCceEEEeeccc-ccCChHHHHHHHHHHHHhC--cCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhcc
Q 005855 357 QETF--AGRKVMLGVDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRING 431 (673)
Q Consensus 357 r~~~--~~~~iIl~VgRLd-~~KGi~~~L~Af~~ll~~~--P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~ 431 (673)
++++ .++++|+++||+. +.||+..+++|++.+.+++ |+ +.|+++|.+. . .+.+.+++++.+.+
T Consensus 243 ~~~~~~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g~----~---~~~~~l~~~~~~~~- 310 (439)
T 3fro_A 243 LSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKGD----P---ELEGWARSLEEKHG- 310 (439)
T ss_dssp HHHHTCCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEECCCC----H---HHHHHHHHHHHHCT-
T ss_pred HHHcCCCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCC----eEEEEEcCCC----h---hHHHHHHHHHhhcC-
Confidence 6666 3448999999999 9999999999999998765 54 5688887421 2 23455666665533
Q ss_pred ccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-cCceEEEC
Q 005855 432 RFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-GAGAILVN 510 (673)
Q Consensus 432 ~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-g~~gllVn 510 (673)
.++++.|.++.+++..+|+.||++|+||..||||++++|||||| .|+|+|+.+|..+.+ +.+|++++
T Consensus 311 --------~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G----~Pvi~s~~~~~~e~~~~~~g~~~~ 378 (439)
T 3fro_A 311 --------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG----AIPIASAVGGLRDIITNETGILVK 378 (439)
T ss_dssp --------TEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTT----CEEEEESSTHHHHHCCTTTCEEEC
T ss_pred --------CEEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCC----CCeEEcCCCCcceeEEcCceEEeC
Confidence 25667899999999999999999999999999999999999995 999999999999888 44899999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHH
Q 005855 511 PWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (673)
Q Consensus 511 P~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~ 564 (673)
|.|++++|++|.+++++.++.+.++.+++++++++++++.+++++++.++++.+
T Consensus 379 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 379 AGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp TTCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred CCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999955567888888999999999999999999998887543
No 4
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.95 E-value=1.3e-26 Score=262.97 Aligned_cols=298 Identities=17% Similarity=0.189 Sum_probs=206.4
Q ss_pred CCCCEEEEeCccchhHHHHHHhhC------CCCeEEeEeccCCCc----hhhhhc--CCc--------------------
Q 005855 230 KDGDVVWCHDYHLMFLPKCLKEYN------SDMKVGWFLHTPFPS----SEIHRT--LPS-------------------- 277 (673)
Q Consensus 230 ~~~DvVwvHDyhl~llp~~Lr~~~------~~~~Ig~flH~PfP~----~e~fr~--lp~-------------------- 277 (673)
.++||+|+||||..++|.+++... .+++++|++|..-.. .+.+.. ++.
T Consensus 152 ~~ddIiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (536)
T 3vue_A 152 GEDVVFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRK 231 (536)
T ss_dssp CSCEEEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEE
T ss_pred CCCEEEEECcchHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccc
Confidence 356899999999999999998764 368999999965210 011110 110
Q ss_pred chHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcC--------Chh
Q 005855 278 RSDLLRAVLAADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI--------NPV 349 (673)
Q Consensus 278 r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~--------~~~ 349 (673)
-.-+..++..||.|..-++.|++..++. .+. ..++....+..++.+||||||.+.|.+.... ...
T Consensus 232 ~n~~k~~i~~ad~v~tVS~~~a~ei~~~----~~~---g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~ 304 (536)
T 3vue_A 232 INWMKAGILEADRVLTVSPYYAEELISG----IAR---GCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTA 304 (536)
T ss_dssp EEHHHHHHHHCSEEEESCHHHHHHHHTT----CCC---CSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTH
T ss_pred hhHHHHHHHhccEEEEcCHHHhhhhhcc----ccc---ccccccccccCCeEEEECCcchhhcCCCCccccccccchhhh
Confidence 0134567889999999999888765421 110 0111222345679999999999999874211 000
Q ss_pred ----HHHHHHHHHHh-----cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHH
Q 005855 350 ----QVHIKELQETF-----AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTS 420 (673)
Q Consensus 350 ----~~~~~~lr~~~-----~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~ 420 (673)
......+++.+ ++.++|++|||+++.||++.+++|+.+++++.+ .|+++|.+ + +++ ..
T Consensus 305 ~~~K~~~k~~l~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~G---~-~~~---~~ 371 (536)
T 3vue_A 305 IEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGTG---K-KKF---EK 371 (536)
T ss_dssp HHHHHHHHHHHHHHTTSCCCTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECCB---C-HHH---HH
T ss_pred hhhhHHHHHHHHHhcCCCCCCCCcEEEEEeeccccCChHHHHHHHHHhHhhCC------eEEEEecc---C-chH---HH
Confidence 11122344444 367899999999999999999999999976543 36666642 2 222 23
Q ss_pred HHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchh
Q 005855 421 QVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ 500 (673)
Q Consensus 421 ~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~ 500 (673)
.++.+....+. .+.+ .+..+.+++..+|+.||+||+||.+||||++++|||||| .|+|+|+.+|+.+
T Consensus 372 ~~~~~~~~~~~--------~v~~-~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G----~PvI~s~~gG~~e 438 (536)
T 3vue_A 372 LLKSMEEKYPG--------KVRA-VVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYG----TPCACASTGGLVD 438 (536)
T ss_dssp HHHHHHHHSTT--------TEEE-ECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHTT----CCEEECSCTHHHH
T ss_pred HHHHHHhhcCC--------ceEE-EEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHcC----CCEEEcCCCCchh
Confidence 33444433321 2443 567899999999999999999999999999999999995 9999999999999
Q ss_pred hc--cCceE----------EECCCCHHHHHHHHHHHhcCC-HHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 501 SL--GAGAI----------LVNPWNITEVANAIARALNMS-PEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 501 ~l--g~~gl----------lVnP~D~~~lA~aI~~aL~m~-~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
.+ |.+|+ +|+|.|++++|++|.++|..- .++.+++.+++ ..++++|++-+++|++.+.+.
T Consensus 439 ~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~~~~a--m~~~fSW~~~A~~y~~ly~~L 511 (536)
T 3vue_A 439 TVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEMVRNC--MNQDLSWKGPAKNWENVLLGL 511 (536)
T ss_dssp HCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHHHHHH--HHSCCSSHHHHHHHHHHHHTT
T ss_pred eeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHh
Confidence 88 66777 788899999999999998632 22333333322 225688888899988877654
No 5
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.94 E-value=3.1e-25 Score=246.30 Aligned_cols=301 Identities=19% Similarity=0.149 Sum_probs=211.5
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCch----hhhhc--CC-------------cchHHHHhhhcCCEE
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSS----EIHRT--LP-------------SRSDLLRAVLAADLV 291 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~----e~fr~--lp-------------~r~~il~~ll~aDlI 291 (673)
..|+||+|+++..+++.+++.+..++++++.+|..++.. ..+.. ++ ........+..+|.|
T Consensus 129 ~~Divh~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 208 (485)
T 2qzs_A 129 RPDVVHAHDWHAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHI 208 (485)
T ss_dssp CCSEEEEETGGGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHHCSEE
T ss_pred CCCEEEeeccchhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHhcCeE
Confidence 569999999998888888764456789999999875421 11111 01 011222345679999
Q ss_pred EEeCHHHHHHHHHHHHHHhccccCCCceeeCCee--eEEEEeecCcChhhhhhhhcC-----------ChhHHHHHHHHH
Q 005855 292 GFHTYDYARHFVSACTRILGFEGTPEGVEDQGRL--TRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQE 358 (673)
Q Consensus 292 gF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~--~~v~viP~GID~~~f~~~~~~-----------~~~~~~~~~lr~ 358 (673)
...+....+.+... .+|.... .+ ..... .++.++|+|||.+.|.+.... +........+++
T Consensus 209 i~~S~~~~~~~~~~---~~~~~~~--~~-~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 282 (485)
T 2qzs_A 209 TAVSPTYAREITEP---QFAYGME--GL-LQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQI 282 (485)
T ss_dssp EESSHHHHHHTTSH---HHHTTCH--HH-HHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHH
T ss_pred EecCHHHHHHHhcc---ccCcchH--HH-HHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHH
Confidence 99988766554321 0110000 00 00011 478899999999988764211 000112344566
Q ss_pred Hhc-----CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhcccc
Q 005855 359 TFA-----GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRF 433 (673)
Q Consensus 359 ~~~-----~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~ 433 (673)
+++ ++++|+++||+++.||+..+++|++.+.+ + ++.|+++|.+ ++ .+.+++++++.+.+
T Consensus 283 ~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--~----~~~l~ivG~g-----~~--~~~~~l~~~~~~~~--- 346 (485)
T 2qzs_A 283 AMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--Q----GGQLALLGAG-----DP--VLQEGFLAAAAEYP--- 346 (485)
T ss_dssp HHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH--T----TCEEEEEEEE-----CH--HHHHHHHHHHHHST---
T ss_pred HcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh--C----CcEEEEEeCC-----ch--HHHHHHHHHHHhCC---
Confidence 553 57899999999999999999999999876 2 3568888842 21 23556666665532
Q ss_pred CCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--c--------
Q 005855 434 GTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G-------- 503 (673)
Q Consensus 434 g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g-------- 503 (673)
..|+++.|. +.+++..+|+.||++|+||.+||||++++|||||| .|+|+|+.+|..+.+ |
T Consensus 347 -----~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~ 416 (485)
T 2qzs_A 347 -----GQVGVQIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYG----TLPLVRRTGGLADTVSDCSLENLADG 416 (485)
T ss_dssp -----TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTT
T ss_pred -----CcEEEeCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHCC----CCEEECCCCCccceeccCcccccccc
Confidence 146656676 88888999999999999999999999999999995 999999999999888 4
Q ss_pred -CceEEECCCCHHHHHHHHHHHhc--CCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHHH
Q 005855 504 -AGAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 504 -~~gllVnP~D~~~lA~aI~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
.+|++|+|.|++++|++|.++++ ..++.+.++.+++++ +.++++..++++++.+++...+
T Consensus 417 ~~~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 417 VASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMA--MDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp CCCBEEECSSSHHHHHHHHHHHHHHHTSHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHC--
T ss_pred ccceEEECCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hcCCHHHHHHHHHHHHHHhhhh
Confidence 68999999999999999999994 245566666666553 7899999999998888776433
No 6
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.94 E-value=2.7e-25 Score=242.74 Aligned_cols=295 Identities=18% Similarity=0.184 Sum_probs=213.8
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhh-hhcC----C-cchHH-HHhhhcCCEEEEeCHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTL----P-SRSDL-LRAVLAADLVGFHTYDYARHFV 303 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~-fr~l----p-~r~~i-l~~ll~aDlIgF~t~~~~~~Fl 303 (673)
..|+|++|++...+++.++++. .+.++.+.+|..++.... +... + .+..+ ...+..+|.|.+.+....+.+.
T Consensus 122 ~~Div~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 200 (438)
T 3c48_A 122 TYDLIHSHYWLSGQVGWLLRDL-WRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLM 200 (438)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HTCCEEEECSSCHHHHSCC----CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred CCCEEEeCCccHHHHHHHHHHH-cCCCEEEEecCCcccccccccccCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHH
Confidence 3799999997665555555543 367889999987432110 0000 0 01111 1234579999999977666553
Q ss_pred HHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHH
Q 005855 304 SACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQ 380 (673)
Q Consensus 304 ~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~ 380 (673)
+ .+|.. ..++.++|+|||.+.|.+... .....+++++ .++++|+++||+.+.||+..
T Consensus 201 ~----~~g~~-----------~~k~~vi~ngvd~~~~~~~~~-----~~~~~~r~~~~~~~~~~~i~~~G~~~~~Kg~~~ 260 (438)
T 3c48_A 201 H----HYDAD-----------PDRISVVSPGADVELYSPGND-----RATERSRRELGIPLHTKVVAFVGRLQPFKGPQV 260 (438)
T ss_dssp H----HHCCC-----------GGGEEECCCCCCTTTSCCC---------CHHHHHHTTCCSSSEEEEEESCBSGGGCHHH
T ss_pred H----HhCCC-----------hhheEEecCCccccccCCccc-----chhhhhHHhcCCCCCCcEEEEEeeecccCCHHH
Confidence 2 23322 346889999999988865321 1112345555 36789999999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 005855 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (673)
Q Consensus 381 ~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 460 (673)
+++|++.+.+++|+. ++.|+++|.+.. +++. .+++++++.+.+. .+ .|+ +.|.++.+++..+|+.|
T Consensus 261 li~a~~~l~~~~p~~--~~~l~i~G~~~~-~g~~----~~~l~~~~~~~~l----~~--~v~-~~g~~~~~~~~~~~~~a 326 (438)
T 3c48_A 261 LIKAVAALFDRDPDR--NLRVIICGGPSG-PNAT----PDTYRHMAEELGV----EK--RIR-FLDPRPPSELVAVYRAA 326 (438)
T ss_dssp HHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTTC----TT--TEE-EECCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhhCCCc--ceEEEEEeCCCC-CCcH----HHHHHHHHHHcCC----CC--cEE-EcCCCChHHHHHHHHhC
Confidence 999999999988742 467888875321 1222 3445555554331 11 355 46899999999999999
Q ss_pred CEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 005855 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (673)
Q Consensus 461 Dv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 538 (673)
|++|+||..||||++++|||||+ .|+|+|+.+|..+.+ +.+|++++|.|++++|++|.++++. ++.+.++.++
T Consensus 327 dv~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~ 401 (438)
T 3c48_A 327 DIVAVPSFNESFGLVAMEAQASG----TPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDD-DETRIRMGED 401 (438)
T ss_dssp SEEEECCSCCSSCHHHHHHHHTT----CCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred CEEEECccccCCchHHHHHHHcC----CCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence 99999999999999999999995 899999999999888 4579999999999999999999985 4577777888
Q ss_pred hhHHHhhCCHHHHHHHHHHHHHHhHHH
Q 005855 539 NFTHVTTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 539 ~~~~v~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
+++++.++++...++++++.++++...
T Consensus 402 ~~~~~~~~s~~~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 402 AVEHARTFSWAATAAQLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHhhh
Confidence 899998899999999999988877654
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.94 E-value=6.4e-25 Score=243.75 Aligned_cols=300 Identities=16% Similarity=0.175 Sum_probs=211.3
Q ss_pred CCCEEEEeCccchhHHHHHHhh-CCCCeEEeEeccCCCch----hhhhc--CCc-------------chHHHHhhhcCCE
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEY-NSDMKVGWFLHTPFPSS----EIHRT--LPS-------------RSDLLRAVLAADL 290 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~-~~~~~Ig~flH~PfP~~----e~fr~--lp~-------------r~~il~~ll~aDl 290 (673)
..|+||+|+++..+++.+++.. ..++++.+.+|..++.. ..+.. ++. .......+..+|.
T Consensus 130 ~~DiIh~~~~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 209 (485)
T 1rzu_A 130 RPDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATA 209 (485)
T ss_dssp CCSEEEEEHHHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSE
T ss_pred CCCEEEecccchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHHhhcCE
Confidence 5699999999888888887764 46789999999875421 11111 110 1122334567999
Q ss_pred EEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcC-----------ChhHHHHHHHHHH
Q 005855 291 VGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEI-----------NPVQVHIKELQET 359 (673)
Q Consensus 291 IgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~-----------~~~~~~~~~lr~~ 359 (673)
|...+....+.+.+. .+|.... . .+.....++.++|+|||.+.|.+.... +........++++
T Consensus 210 vi~~S~~~~~~~~~~---~~g~~~~--~-~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 283 (485)
T 1rzu_A 210 LSTVSPSYAEEILTA---EFGMGLE--G-VIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEH 283 (485)
T ss_dssp EEESCHHHHHHTTSH---HHHTTCH--H-HHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHH
T ss_pred EEecCHhHHHHHhcc---ccCcchH--H-HHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHh
Confidence 999988766654321 0110000 0 000013478899999999988764211 0011122345555
Q ss_pred hc---C-CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCC
Q 005855 360 FA---G-RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (673)
Q Consensus 360 ~~---~-~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~ 435 (673)
++ + +++|+++||+++.||+..+++|+..+.+. ++.|+++|.+ ++ .+++++++++.+.+
T Consensus 284 ~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~------~~~l~ivG~g-----~~--~~~~~l~~~~~~~~----- 345 (485)
T 1rzu_A 284 FRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL------GGRLVVLGAG-----DV--ALEGALLAAASRHH----- 345 (485)
T ss_dssp HTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHT------TCEEEEEECB-----CH--HHHHHHHHHHHHTT-----
T ss_pred cCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHhc------CceEEEEeCC-----ch--HHHHHHHHHHHhCC-----
Confidence 52 2 67999999999999999999999998752 4668888842 21 23456666665542
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--c---------C
Q 005855 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--G---------A 504 (673)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g---------~ 504 (673)
..|+++.|. +.+++..+|+.||++|+||.+||||++++|||||| .|+|+|+.+|..+.+ | .
T Consensus 346 ---~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~gg~~e~v~~~~~~~~~~~~~ 417 (485)
T 1rzu_A 346 ---GRVGVAIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYG----CIPVVARTGGLADTVIDANHAALASKAA 417 (485)
T ss_dssp ---TTEEEEESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHT----CEEEEESSHHHHHHCCBCCHHHHHTTCC
T ss_pred ---CcEEEecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHCC----CCEEEeCCCChhheecccccccccccCC
Confidence 136656666 88888999999999999999999999999999995 999999999999888 4 6
Q ss_pred ceEEECCCCHHHHHHHHHHHhc--CCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHH
Q 005855 505 GAILVNPWNITEVANAIARALN--MSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVV 564 (673)
Q Consensus 505 ~gllVnP~D~~~lA~aI~~aL~--m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~ 564 (673)
+|++|+|.|++++|++|.++++ ..++.+.++.+++++ +.++++..++++++..+++..
T Consensus 418 ~G~l~~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~y~~~~~ 477 (485)
T 1rzu_A 418 TGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAALYSQLIS 477 (485)
T ss_dssp CBEEESSCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHHHHHHTC
T ss_pred cceEeCCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHHHHHhhC
Confidence 8999999999999999999994 235566666666654 788999999999888876543
No 8
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.94 E-value=1.7e-25 Score=249.80 Aligned_cols=303 Identities=16% Similarity=0.087 Sum_probs=215.3
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhh-hhcC----C---------cchHH-HHhhhcCCEEEEeC
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEI-HRTL----P---------SRSDL-LRAVLAADLVGFHT 295 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~-fr~l----p---------~r~~i-l~~ll~aDlIgF~t 295 (673)
..|+||+|+++..+++.++++. .++++.+++|..++.... +... | ....+ ...+..+|.|.+.+
T Consensus 120 ~~Divh~~~~~~~~~~~~~~~~-~~~p~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S 198 (499)
T 2r60_A 120 FPQVVTTHYGDGGLAGVLLKNI-KGLPFTFTGHSLGAQKMEKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVST 198 (499)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHH-HCCCEEEECSSCHHHHHHTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESS
T ss_pred CCCEEEEcCCcchHHHHHHHHh-cCCcEEEEccCcccccchhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECC
Confidence 5699999998776666666544 357888999986432110 0000 0 00011 22345789998888
Q ss_pred HHHHHHHHHHHHHH--hc-cccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh--------cCCc
Q 005855 296 YDYARHFVSACTRI--LG-FEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--------AGRK 364 (673)
Q Consensus 296 ~~~~~~Fl~~~~r~--l~-~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--------~~~~ 364 (673)
....+.+.. . +| ... .....++.++|+|||.+.|.+... ......+++++ .+++
T Consensus 199 ~~~~~~~~~----~~~~g~~~~-------~~~~~ki~vi~ngvd~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~~~ 263 (499)
T 2r60_A 199 SQERFGQYS----HDLYRGAVN-------VEDDDKFSVIPPGVNTRVFDGEYG----DKIKAKITKYLERDLGSERMELP 263 (499)
T ss_dssp HHHHHHTTT----SGGGTTTCC-------TTCGGGEEECCCCBCTTTSSSCCC----HHHHHHHHHHHHHHSCGGGTTSC
T ss_pred HHHHHHHHh----hhccccccc-------ccCCCCeEEECCCcChhhcCccch----hhhHHHHHHHhcccccccCCCCc
Confidence 755544321 1 11 100 002357899999999998875321 11223344443 3678
Q ss_pred eEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCC----h---HHHHHHHHHHHHHHHhhccccCCCC
Q 005855 365 VMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTD----V---PEYQRLTSQVHEIVGRINGRFGTLT 437 (673)
Q Consensus 365 iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~----~---~ey~~l~~~l~~lv~~IN~~~g~~~ 437 (673)
+|+++||+.+.||+..+++|+..+.+++|+. +.|+++|... +. . .+..++.+++++++.+.+.. +
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~-~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~----~ 335 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIE-NPFEDYSRAGQEEKEILGKIIELIDNNDCR----G 335 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCS-BTTTBCTTSCHHHHHHHHHHHHHHHHTTCB----T
T ss_pred EEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCC-CcccccccccccchHHHHHHHHHHHhcCCC----c
Confidence 9999999999999999999999998776642 4577666411 11 0 11223456677777664421 1
Q ss_pred cccEEEeCCCCCHHHHHHHHHHc----CEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECC
Q 005855 438 AVPIHHLDRSLDFPALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNP 511 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~A----Dv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP 511 (673)
.|+ |.|.++.+++..+|+.| |++|+||.+||||++++|||||| .|+|+|+.+|..+.+ |.+|++|+|
T Consensus 336 --~V~-~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~g~l~~~ 408 (499)
T 2r60_A 336 --KVS-MFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASG----LPAVVTRNGGPAEILDGGKYGVLVDP 408 (499)
T ss_dssp --TEE-EEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTT----CCEEEESSBHHHHHTGGGTSSEEECT
T ss_pred --eEE-ECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcC----CCEEEecCCCHHHHhcCCceEEEeCC
Confidence 355 46899999999999999 99999999999999999999995 899999999988888 457999999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhh-CCHHHHHHHHHHHHHHhHHH
Q 005855 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTT-HTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 512 ~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~-~~~~~W~~~fl~~L~~~~~~ 565 (673)
.|++++|++|.++++. ++.+.++.+++++++.+ ++++..++++++.++++...
T Consensus 409 ~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~ 462 (499)
T 2r60_A 409 EDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADR 462 (499)
T ss_dssp TCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999985 45777888888898877 99999999999988877654
No 9
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.94 E-value=7.8e-25 Score=234.52 Aligned_cols=282 Identities=18% Similarity=0.212 Sum_probs=209.0
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHH-HhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLL-RAVLAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il-~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
..|+||+|+...+.+...+.++....++.+.+|...+. +...+....+. ..+..+|.|.+.+....+.+.+ .
T Consensus 86 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~---~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----~ 158 (394)
T 3okp_A 86 EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG---WSMLPGSRQSLRKIGTEVDVLTYISQYTLRRFKS----A 158 (394)
T ss_dssp TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH---HTTSHHHHHHHHHHHHHCSEEEESCHHHHHHHHH----H
T ss_pred CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh---hhhcchhhHHHHHHHHhCCEEEEcCHHHHHHHHH----h
Confidence 35999999876554333333333444688888965321 11222222232 3356799999999876665543 2
Q ss_pred hccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhc---CCceEEEeecccccCChHHHHHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLDMIKGIPQKLLAFE 386 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~VgRLd~~KGi~~~L~Af~ 386 (673)
.+ ...++.++|+|||.+.|.+.. ......++++++ ++++|+++||+.+.||+..+++|++
T Consensus 159 ~~------------~~~~~~vi~ngv~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a~~ 221 (394)
T 3okp_A 159 FG------------SHPTFEHLPSGVDVKRFTPAT-----PEDKSATRKKLGFTDTTPVIACNSRLVPRKGQDSLIKAMP 221 (394)
T ss_dssp HC------------SSSEEEECCCCBCTTTSCCCC-----HHHHHHHHHHTTCCTTCCEEEEESCSCGGGCHHHHHHHHH
T ss_pred cC------------CCCCeEEecCCcCHHHcCCCC-----chhhHHHHHhcCCCcCceEEEEEeccccccCHHHHHHHHH
Confidence 22 134789999999999886521 123345666662 5589999999999999999999999
Q ss_pred HHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEc
Q 005855 387 KFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVT 466 (673)
Q Consensus 387 ~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~ 466 (673)
++.+++|++ .|+++|. ++.. +.+++++..++ ..|+ +.|.++.+++..+|+.||++|+|
T Consensus 222 ~l~~~~~~~----~l~i~G~-----g~~~----~~l~~~~~~~~--------~~v~-~~g~~~~~~~~~~~~~ad~~v~p 279 (394)
T 3okp_A 222 QVIAARPDA----QLLIVGS-----GRYE----STLRRLATDVS--------QNVK-FLGRLEYQDMINTLAAADIFAMP 279 (394)
T ss_dssp HHHHHSTTC----EEEEECC-----CTTH----HHHHHHTGGGG--------GGEE-EEESCCHHHHHHHHHHCSEEEEC
T ss_pred HHHhhCCCe----EEEEEcC-----chHH----HHHHHHHhccc--------CeEE-EcCCCCHHHHHHHHHhCCEEEec
Confidence 999988865 4887763 2322 33444432222 1355 46889999999999999999999
Q ss_pred CCC-------cCCChhHHHHHhhccCCCceEEEeCCCCchhhcc-CceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 005855 467 SLR-------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (673)
Q Consensus 467 Sl~-------EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~lg-~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 538 (673)
|.. ||||++++|||||| .|+|+|+.+|..+.+. .+|++++|.|++++|++|.++++. +++++++.++
T Consensus 280 s~~~~~~~~~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~ 354 (394)
T 3okp_A 280 ARTRGGGLDVEGLGIVYLEAQACG----VPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDD-PIRRAAMGAA 354 (394)
T ss_dssp CCCBGGGTBCCSSCHHHHHHHHTT----CCEEECSSTTGGGGCCTTTEEECCTTCHHHHHHHHHHHHTC-HHHHHHHHHH
T ss_pred CccccccccccccCcHHHHHHHcC----CCEEEeCCCChHHHHhcCCceEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHH
Confidence 999 99999999999995 8999999999998882 289999999999999999999985 4577788888
Q ss_pred hhHHHhh-CCHHHHHHHHHHHHHHhH
Q 005855 539 NFTHVTT-HTAQEWAETFVSELNDTV 563 (673)
Q Consensus 539 ~~~~v~~-~~~~~W~~~fl~~L~~~~ 563 (673)
+++.+.+ ++++.+++++++.+++..
T Consensus 355 ~~~~~~~~~s~~~~~~~~~~~~~~~~ 380 (394)
T 3okp_A 355 GRAHVEAEWSWEIMGERLTNILQSEP 380 (394)
T ss_dssp HHHHHHHHTBHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 8888865 899999999999888754
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.93 E-value=6.6e-25 Score=238.57 Aligned_cols=280 Identities=21% Similarity=0.200 Sum_probs=200.0
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|+++...+..+++. ..++.+.+|..++.... .....+.+.+..+|.+.+.+.++.+.
T Consensus 126 ~~Dvv~~~~~~~~~~~~~~~~---~~p~v~~~h~~~~~~~~----~~~~~~~~~~~~~~~~i~~~s~~~~~--------- 189 (416)
T 2x6q_A 126 SFDYVLVHDPQPAALIEFYEK---KSPWLWRCHIDLSSPNR----EFWEFLRRFVEKYDRYIFHLPEYVQP--------- 189 (416)
T ss_dssp GSSEEEEESSTTGGGGGGSCC---CSCEEEECCSCCSSCCH----HHHHHHHHHHTTSSEEEESSGGGSCT---------
T ss_pred CCCEEEEeccchhhHHHHHHh---cCCEEEEEccccCCccH----HHHHHHHHHHHhCCEEEEechHHHHh---------
Confidence 469999999887766655543 27899999987653210 00111222234556555443322111
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLAFEK 387 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~L~Af~~ 387 (673)
.+ ...++.++|+|||+..|.+.... ......+++++ .++++|+++||+.+.||+..+++|+..
T Consensus 190 -------~~----~~~~~~vi~ngvd~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~ 255 (416)
T 2x6q_A 190 -------EL----DRNKAVIMPPSIDPLSEKNVELK---QTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRK 255 (416)
T ss_dssp -------TS----CTTTEEECCCCBCTTSTTTSCCC---HHHHHHHHHHTTCCTTSCEEEEECCCCTTSCHHHHHHHHHH
T ss_pred -------hC----CccceEEeCCCCChhhhcccccC---hhhHHHHHHHhCCCCCCcEEEEEeccccccCHHHHHHHHHH
Confidence 11 11467899999998777543211 12334566665 367899999999999999999999999
Q ss_pred HHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCC---CCCHHHHHHHHHHcCEEE
Q 005855 388 FLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDR---SLDFPALCALYAVTDVAL 464 (673)
Q Consensus 388 ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~---~v~~~el~aly~~ADv~v 464 (673)
+.+++|++ .|+++|.+... .+++ .+.+++++.+.+.. ..|++ .| .++.+++..+|+.||++|
T Consensus 256 l~~~~~~~----~l~i~G~g~~~-~~~~---~~~l~~~~~~~~~~------~~V~~-~G~~~~~~~~~~~~~~~~ad~~v 320 (416)
T 2x6q_A 256 VKEKIPGV----QLLLVGVMAHD-DPEG---WIYFEKTLRKIGED------YDVKV-LTNLIGVHAREVNAFQRASDVIL 320 (416)
T ss_dssp HHHHCTTC----EEEEEECCCTT-CHHH---HHHHHHHHHHHTTC------TTEEE-EEGGGTCCHHHHHHHHHHCSEEE
T ss_pred HHHhCCCe----EEEEEecCccc-chhH---HHHHHHHHHHhCCC------CcEEE-ecccCCCCHHHHHHHHHhCCEEE
Confidence 99988865 48888854321 1332 33444555444321 13665 44 455889999999999999
Q ss_pred EcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHH
Q 005855 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (673)
Q Consensus 465 v~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (673)
+||..||||++++|||||| .|+|+|+.+|..+.+ |.+|++++ |++++|++|.++++. ++.+.++.++++++
T Consensus 321 ~ps~~E~~~~~~lEAma~G----~PvI~~~~~g~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~-~~~~~~~~~~a~~~ 393 (416)
T 2x6q_A 321 QMSIREGFGLTVTEAMWKG----KPVIGRAVGGIKFQIVDGETGFLVR--DANEAVEVVLYLLKH-PEVSKEMGAKAKER 393 (416)
T ss_dssp ECCSSCSSCHHHHHHHHTT----CCEEEESCHHHHHHCCBTTTEEEES--SHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred ECCCcCCCccHHHHHHHcC----CCEEEccCCCChhheecCCCeEEEC--CHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 9999999999999999995 899999999988888 56899997 999999999999985 45677778888888
Q ss_pred Hh-hCCHHHHHHHHHHHHHHh
Q 005855 543 VT-THTAQEWAETFVSELNDT 562 (673)
Q Consensus 543 v~-~~~~~~W~~~fl~~L~~~ 562 (673)
+. .+++...++++++.++++
T Consensus 394 ~~~~fs~~~~~~~~~~~~~~l 414 (416)
T 2x6q_A 394 VRKNFIITKHMERYLDILNSL 414 (416)
T ss_dssp HHHHTBHHHHHHHHHHHHHTC
T ss_pred HHHHcCHHHHHHHHHHHHHHh
Confidence 85 789999999998877653
No 11
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.93 E-value=4.3e-25 Score=260.09 Aligned_cols=312 Identities=11% Similarity=0.100 Sum_probs=213.9
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcch---------H---HHHhhhcCCEEEEeCHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRS---------D---LLRAVLAADLVGFHTYDY 298 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~---------~---il~~ll~aDlIgF~t~~~ 298 (673)
..|+||.|++...+++.+++++. +++++++.|...+.........|.. . -...+..||.|...+...
T Consensus 407 ~PDVIHsH~~~sglva~llar~~-gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~ 485 (816)
T 3s28_A 407 KPDLIIGNYSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQE 485 (816)
T ss_dssp CCSEEEEEHHHHHHHHHHHHHHH-TCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHH
T ss_pred CCeEEEeCCchHHHHHHHHHHHc-CCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHH
Confidence 56999999877777777776654 6889999997532111101011100 0 012466899999888765
Q ss_pred HHHHHHHHHHHhccccC---C------CceeeCCeeeEEEEeecCcChhhhhhhhcCCh----hHHHHHHH-------HH
Q 005855 299 ARHFVSACTRILGFEGT---P------EGVEDQGRLTRVAAFPIGIDSERFIRALEINP----VQVHIKEL-------QE 358 (673)
Q Consensus 299 ~~~Fl~~~~r~l~~~~~---~------~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~----~~~~~~~l-------r~ 358 (673)
+......+.. .+.... + .++.... .++.++|+|||.+.|.+...... .......+ ++
T Consensus 486 ~~~l~~~~~~-y~~~~~~~~p~Lyr~~~gI~~~~--~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~ 562 (816)
T 3s28_A 486 IAGSKETVGQ-YESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKE 562 (816)
T ss_dssp HHCCSSSCCT-TGGGSSEEETTTEEEEESCCTTC--TTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTT
T ss_pred HHHHHHHHHH-hhhhhccccchhhhcccccccCC--CCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHH
Confidence 5431110000 000000 0 0111111 18999999999999987542211 01111111 01
Q ss_pred H-----hcCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCC--CCChHHHHHHHHHHHHHHHhhcc
Q 005855 359 T-----FAGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPT--RTDVPEYQRLTSQVHEIVGRING 431 (673)
Q Consensus 359 ~-----~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~ps--r~~~~ey~~l~~~l~~lv~~IN~ 431 (673)
. ..++++|+++||+++.||+..+++|+.++.+.+|+ +.|+++|.+. .....+..+..+++.+++.+.+.
T Consensus 563 ~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~----v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL 638 (816)
T 3s28_A 563 HLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLREL----ANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKL 638 (816)
T ss_dssp EESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHH----CEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred HhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCC----eEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCC
Confidence 1 13678999999999999999999999999887765 4588888644 11223344456677777766542
Q ss_pred ccCCCCcccEEEeCC----CCCHHHHHHHHH-HcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cC
Q 005855 432 RFGTLTAVPIHHLDR----SLDFPALCALYA-VTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GA 504 (673)
Q Consensus 432 ~~g~~~~~pV~~~~~----~v~~~el~aly~-~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~ 504 (673)
. ..|.| .| .++.+++..+|+ +|||||+||.+||||++++|||||| .|+|+|+.+|..+.+ |.
T Consensus 639 ~------~~V~f-lG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G----~PVIasd~GG~~EiV~dg~ 707 (816)
T 3s28_A 639 N------GQFRW-ISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCG----LPTFATCKGGPAEIIVHGK 707 (816)
T ss_dssp B------BBEEE-ECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTT----CCEEEESSBTHHHHCCBTT
T ss_pred C------CcEEE-ccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcC----CCEEEeCCCChHHHHccCC
Confidence 1 13555 45 445689999998 6899999999999999999999995 999999999999998 67
Q ss_pred ceEEECCCCHHHHHHHHHHHh----cCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHHHHh
Q 005855 505 GAILVNPWNITEVANAIARAL----NMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 505 ~gllVnP~D~~~lA~aI~~aL----~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~~ 562 (673)
+|++|+|.|++++|++|.+++ ..+ +.+.++.+++++++ +.|++..+++++++..+..
T Consensus 708 ~Gllv~p~D~e~LA~aI~~lL~~Ll~d~-~~~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~ 769 (816)
T 3s28_A 708 SGFHIDPYHGDQAADTLADFFTKCKEDP-SHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVY 769 (816)
T ss_dssp TBEEECTTSHHHHHHHHHHHHHHHHHCT-HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHH
T ss_pred cEEEeCCCCHHHHHHHHHHHHHHhccCH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 899999999999999998877 555 47788888889988 7899999999998877654
No 12
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.93 E-value=3.2e-24 Score=232.69 Aligned_cols=283 Identities=15% Similarity=0.099 Sum_probs=203.8
Q ss_pred CCCEEEEeCccchhHHHHHHhh-CC-CCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCC--EEEEeCHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEY-NS-DMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAAD--LVGFHTYDYARHFVSAC 306 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~-~~-~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aD--lIgF~t~~~~~~Fl~~~ 306 (673)
..|+|++|.+...+.+.+.+.. .| ..++...+|...+.. +..+...+..+| .|.+.+....+.+..
T Consensus 81 ~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ii~~S~~~~~~~~~-- 150 (413)
T 3oy2_A 81 KPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNI--------RENLWWIFSHPKVVGVMAMSKCWISDICN-- 150 (413)
T ss_dssp CCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSC--------CGGGGGGGGCTTEEEEEESSTHHHHHHHH--
T ss_pred CCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhh--------HHHHHHHHhccCCceEEEcCHHHHHHHHH--
Confidence 4599999955444433332222 22 345566666543321 111223345677 888888765555432
Q ss_pred HHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---c--CCceEEEeecccccCChHHH
Q 005855 307 TRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---A--GRKVMLGVDRLDMIKGIPQK 381 (673)
Q Consensus 307 ~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~--~~~iIl~VgRLd~~KGi~~~ 381 (673)
++. ..++.++|+|||.+.|.. .++++ . ++++|+++||+.+.||+..+
T Consensus 151 ---~~~------------~~~~~vi~ngvd~~~~~~-------------~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~l 202 (413)
T 3oy2_A 151 ---YGC------------KVPINIVSHFVDTKTIYD-------------ARKLVGLSEYNDDVLFLNMNRNTARKRLDIY 202 (413)
T ss_dssp ---TTC------------CSCEEECCCCCCCCCCTT-------------HHHHTTCGGGTTSEEEECCSCSSGGGTHHHH
T ss_pred ---cCC------------CCceEEeCCCCCHHHHHH-------------HHHhcCCCcccCceEEEEcCCCchhcCcHHH
Confidence 221 247889999999988721 12222 2 67899999999999999999
Q ss_pred HHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC-cccEEEeCCCCCHHHHHHHHHHc
Q 005855 382 LLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT-AVPIHHLDRSLDFPALCALYAVT 460 (673)
Q Consensus 382 L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~-~~pV~~~~~~v~~~el~aly~~A 460 (673)
++|+.++.+++|+++ |+++|.+..... ..+++.+++++.+.+-.- ... +..++++.|.++.+++..+|+.|
T Consensus 203 i~a~~~l~~~~~~~~----l~ivG~g~~~~~---~~l~~~~~~~~~~~~l~~-~v~~l~~vv~~~g~~~~~~~~~~~~~a 274 (413)
T 3oy2_A 203 VLAAARFISKYPDAK----VRFLCNSHHESK---FDLHSIALRELVASGVDN-VFTHLNKIMINRTVLTDERVDMMYNAC 274 (413)
T ss_dssp HHHHHHHHHHCTTCC----EEEEEECCTTCS---CCHHHHHHHHHHHHTCSC-HHHHHTTEEEECSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCCcE----EEEEeCCcccch---hhHHHHHHHHHHHcCccc-ccccccceeeccCcCCHHHHHHHHHhC
Confidence 999999999998865 888886442211 124455666665543210 000 00256678999999999999999
Q ss_pred CEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCc---------------eE--EECCCCHHHHHHHH
Q 005855 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAG---------------AI--LVNPWNITEVANAI 521 (673)
Q Consensus 461 Dv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~---------------gl--lVnP~D~~~lA~aI 521 (673)
|++|+||..||||++++|||||| .|+|+|+.+|..+.+ +.+ |+ +++|.|++++|++|
T Consensus 275 dv~v~pS~~E~~~~~~lEAma~G----~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i 350 (413)
T 3oy2_A 275 DVIVNCSSGEGFGLCSAEGAVLG----KPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF 350 (413)
T ss_dssp SEEEECCSCCSSCHHHHHHHTTT----CCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH
T ss_pred CEEEeCCCcCCCCcHHHHHHHcC----CCEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH
Confidence 99999999999999999999995 899999999998888 344 88 99999999999999
Q ss_pred HHHhcCCHHHHHHHHHHhhHHH-hhCCHHHHHHHHHHHHHHhHHH
Q 005855 522 ARALNMSPEEREKRHWHNFTHV-TTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 522 ~~aL~m~~~er~~r~~~~~~~v-~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
++++. ++++.++.+++++++ +.++++.+++++++.++++.+.
T Consensus 351 -~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 393 (413)
T 3oy2_A 351 -TFFKD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRV 393 (413)
T ss_dssp -HHTTS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC-
T ss_pred -HHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 99985 557788888889988 5789999999999999886543
No 13
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.93 E-value=2.6e-24 Score=231.73 Aligned_cols=276 Identities=17% Similarity=0.098 Sum_probs=209.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|.+....++.++.+. .+.++.+.+|..+|....++.+-.. +-..+..+|.+.+.+......+.+ .+
T Consensus 107 ~~Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~~~~----~~ 179 (406)
T 2gek_A 107 DFDVLHIHEPNAPSLSMLALQA-AEGPIVATFHTSTTKSLTLSVFQGI--LRPYHEKIIGRIAVSDLARRWQME----AL 179 (406)
T ss_dssp CCSEEEEECCCSSSHHHHHHHH-EESSEEEEECCCCCSHHHHHHHHST--THHHHTTCSEEEESSHHHHHHHHH----HH
T ss_pred CCCEEEECCccchHHHHHHHHh-cCCCEEEEEcCcchhhhhHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHH----hc
Confidence 4599999998887765555443 3588999999988765433221111 114456799999999766655543 12
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecc-cccCChHHHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQKLLAFEKFL 389 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRL-d~~KGi~~~L~Af~~ll 389 (673)
+ ..++ ++|+|||.+.|.+...... + -.++++|+++||+ .+.||+..+++|+..+.
T Consensus 180 ~-------------~~~~-vi~~~v~~~~~~~~~~~~~-------~---~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~ 235 (406)
T 2gek_A 180 G-------------SDAV-EIPNGVDVASFADAPLLDG-------Y---PREGRTVLFLGRYDEPRKGMAVLLAALPKLV 235 (406)
T ss_dssp S-------------SCEE-ECCCCBCHHHHHTCCCCTT-------C---SCSSCEEEEESCTTSGGGCHHHHHHHHHHHH
T ss_pred C-------------CCcE-EecCCCChhhcCCCchhhh-------c---cCCCeEEEEEeeeCccccCHHHHHHHHHHHH
Confidence 2 1367 9999999998875432110 0 1256899999999 99999999999999998
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC-
Q 005855 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL- 468 (673)
Q Consensus 390 ~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl- 468 (673)
+++|++ .|+++|. +++ ..++ +++.+.. ..|. +.|.++.+++..+|+.||++|+||.
T Consensus 236 ~~~~~~----~l~i~G~-----~~~-~~l~----~~~~~~~--------~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~ 292 (406)
T 2gek_A 236 ARFPDV----EILIVGR-----GDE-DELR----EQAGDLA--------GHLR-FLGQVDDATKASAMRSADVYCAPHLG 292 (406)
T ss_dssp TTSTTC----EEEEESC-----SCH-HHHH----HHTGGGG--------GGEE-ECCSCCHHHHHHHHHHSSEEEECCCS
T ss_pred HHCCCe----EEEEEcC-----CcH-HHHH----HHHHhcc--------CcEE-EEecCCHHHHHHHHHHCCEEEecCCC
Confidence 888765 4777764 222 3333 3333321 1355 5789999999999999999999997
Q ss_pred CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhC
Q 005855 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (673)
Q Consensus 469 ~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 546 (673)
.||||++++|||+|| .|+|+|+.+|..+.+ |.+|++++|.|+++++++|.++++.+ +.+.++.+++++++..+
T Consensus 293 ~e~~~~~~~Ea~a~G----~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~-~~~~~~~~~~~~~~~~~ 367 (406)
T 2gek_A 293 GESFGIVLVEAMAAG----TAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDD-QLRAGYVARASERVHRY 367 (406)
T ss_dssp CCSSCHHHHHHHHHT----CEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHGGGG
T ss_pred CCCCchHHHHHHHcC----CCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHhC
Confidence 999999999999995 899999998888888 46899999999999999999999854 56777788889999899
Q ss_pred CHHHHHHHHHHHHHHhHHH
Q 005855 547 TAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 547 ~~~~W~~~fl~~L~~~~~~ 565 (673)
++...++++++.+++....
T Consensus 368 s~~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 368 DWSVVSAQIMRVYETVSGA 386 (406)
T ss_dssp BHHHHHHHHHHHHHHHCCT
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 9999999998888876543
No 14
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.93 E-value=3.5e-24 Score=231.15 Aligned_cols=280 Identities=17% Similarity=0.190 Sum_probs=200.5
Q ss_pred CCCEEEEeCccchhHHHHH-HhhCC-CCeEEeEeccCCCchhhhhcCCcchHH-HHhhhcCCEEEEeCHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCL-KEYNS-DMKVGWFLHTPFPSSEIHRTLPSRSDL-LRAVLAADLVGFHTYDYARHFVSACT 307 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~L-r~~~~-~~~Ig~flH~PfP~~e~fr~lp~r~~i-l~~ll~aDlIgF~t~~~~~~Fl~~~~ 307 (673)
..|+|++|+.....++.++ +.... +.++.+.+|...+ ..+..-+....+ ...+..+|.|...+....+.+.+
T Consensus 99 ~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~--~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 173 (394)
T 2jjm_A 99 NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI--TVLGSDPSLNNLIRFGIEQSDVVTAVSHSLINETHE--- 173 (394)
T ss_dssp TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH--HTTTTCTTTHHHHHHHHHHSSEEEESCHHHHHHHHH---
T ss_pred CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc--cccCCCHHHHHHHHHHHhhCCEEEECCHHHHHHHHH---
Confidence 4599999986654444444 33333 6899999997421 111111222222 23355799999998766555432
Q ss_pred HHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCCceEEEeecccccCChHHHHHH
Q 005855 308 RILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGRKVMLGVDRLDMIKGIPQKLLA 384 (673)
Q Consensus 308 r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~~iIl~VgRLd~~KGi~~~L~A 384 (673)
..+ ...++.++|+|||++.|.+.. . ..+++++ .++++|+++||+.+.||+..+++|
T Consensus 174 -~~~------------~~~~~~vi~ngv~~~~~~~~~--~------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~li~a 232 (394)
T 2jjm_A 174 -LVK------------PNKDIQTVYNFIDERVYFKRD--M------TQLKKEYGISESEKILIHISNFRKVKRVQDVVQA 232 (394)
T ss_dssp -HTC------------CSSCEEECCCCCCTTTCCCCC--C------HHHHHHTTCC---CEEEEECCCCGGGTHHHHHHH
T ss_pred -hhC------------CcccEEEecCCccHHhcCCcc--h------HHHHHHcCCCCCCeEEEEeeccccccCHHHHHHH
Confidence 221 124788999999999886531 1 1234444 357899999999999999999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEE
Q 005855 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVAL 464 (673)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~v 464 (673)
++.+.++ ++ +.|+++|. +++.. ++++++.+.+. . ..|.+ .|. .+++..+|+.||++|
T Consensus 233 ~~~l~~~-~~----~~l~i~G~-----g~~~~----~l~~~~~~~~l----~--~~v~~-~g~--~~~~~~~~~~adv~v 289 (394)
T 2jjm_A 233 FAKIVTE-VD----AKLLLVGD-----GPEFC----TILQLVKNLHI----E--DRVLF-LGK--QDNVAELLAMSDLML 289 (394)
T ss_dssp HHHHHHS-SC----CEEEEECC-----CTTHH----HHHHHHHTTTC----G--GGBCC-CBS--CSCTHHHHHTCSEEE
T ss_pred HHHHHhh-CC----CEEEEECC-----chHHH----HHHHHHHHcCC----C--CeEEE-eCc--hhhHHHHHHhCCEEE
Confidence 9998766 33 45887763 23333 34444444321 1 12443 453 578999999999999
Q ss_pred EcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHH
Q 005855 465 VTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTH 542 (673)
Q Consensus 465 v~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~ 542 (673)
+||..||||++++|||||| .|+|+|+.+|..+.+ |.+|++++|.|++++|++|.++++. ++.+.++.++++++
T Consensus 290 ~ps~~e~~~~~~~EAma~G----~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~~~~~ 364 (394)
T 2jjm_A 290 LLSEKESFGLVLLEAMACG----VPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARES 364 (394)
T ss_dssp ECCSCCSCCHHHHHHHHTT----CCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred eccccCCCchHHHHHHhcC----CCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHH
Confidence 9999999999999999995 999999999999888 5789999999999999999999985 45677778888888
Q ss_pred H-hhCCHHHHHHHHHHHHHHhHH
Q 005855 543 V-TTHTAQEWAETFVSELNDTVV 564 (673)
Q Consensus 543 v-~~~~~~~W~~~fl~~L~~~~~ 564 (673)
+ +.++++..++++++.++++..
T Consensus 365 ~~~~~s~~~~~~~~~~~~~~~~~ 387 (394)
T 2jjm_A 365 VYEQFRSEKIVSQYETIYYDVLR 387 (394)
T ss_dssp HHHHSCHHHHHHHHHHHHHHTC-
T ss_pred HHHhCCHHHHHHHHHHHHHHHHh
Confidence 8 889999999999998887643
No 15
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.92 E-value=1.9e-22 Score=229.22 Aligned_cols=313 Identities=13% Similarity=0.070 Sum_probs=204.0
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccC----C----CchhhhhcCC--------------cchH-HHHhhhc
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTP----F----PSSEIHRTLP--------------SRSD-LLRAVLA 287 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~P----f----P~~e~fr~lp--------------~r~~-il~~ll~ 287 (673)
..|++|+||||..++|.+||+..++++.+|+.|.- + -..+++..+. ..-. .-.++..
T Consensus 181 ~pdIiH~HDW~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKaga~~ 260 (725)
T 3nb0_A 181 HAIVAHFHEWLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERAAAHS 260 (725)
T ss_dssp EEEEEEEESGGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCcEEEeCchhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHHHHHh
Confidence 46999999999999999999999999999999975 1 1111121111 0111 2235678
Q ss_pred CCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCC----hhHHHHH-HHHHHh--
Q 005855 288 ADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEIN----PVQVHIK-ELQETF-- 360 (673)
Q Consensus 288 aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~----~~~~~~~-~lr~~~-- 360 (673)
||.|...++.|++.-. .+++.. ...+ ||||||++.|.+..... ..++.++ .++..+
T Consensus 261 AD~ITTVS~~yA~Ei~----~Ll~r~-----------~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~ 323 (725)
T 3nb0_A 261 ADVFTTVSQITAFEAE----HLLKRK-----------PDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHG 323 (725)
T ss_dssp SSEEEESSHHHHHHHH----HHTSSC-----------CSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCEEEECCHHHHHHHH----HHhcCC-----------CCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhccc
Confidence 9999999888776533 344321 2233 99999999987631100 0111111 122212
Q ss_pred -----cCCceEEE-eeccc-ccCChHHHHHHHHHHHHhC--cCccCceEEEEEEcCCCCChHH-----HH----HHHHHH
Q 005855 361 -----AGRKVMLG-VDRLD-MIKGIPQKLLAFEKFLEEN--SDWRGKVVLLQIAVPTRTDVPE-----YQ----RLTSQV 422 (673)
Q Consensus 361 -----~~~~iIl~-VgRLd-~~KGi~~~L~Af~~ll~~~--P~~~~~v~Lvqvg~psr~~~~e-----y~----~l~~~l 422 (673)
.++++|++ +||++ ..||++.+++|+.++...- -+....|+-+ |..|+...... .+ +|++.+
T Consensus 324 ~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvaf-ii~p~~~~~~~~~~l~~~~~~~~l~~~~ 402 (725)
T 3nb0_A 324 CFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAF-IVMPAKNNSFTVEALKGQAEVRALENTV 402 (725)
T ss_dssp CCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEE-EECCCCEEEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEE-EEeCCCCCCCchhhhcchhHHHHHHHHH
Confidence 24566666 79999 5899999999999986431 1111123222 33355433311 11 122111
Q ss_pred HHHH-------------------------------------------------------------------------Hhh
Q 005855 423 HEIV-------------------------------------------------------------------------GRI 429 (673)
Q Consensus 423 ~~lv-------------------------------------------------------------------------~~I 429 (673)
+.+- .++
T Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l 482 (725)
T 3nb0_A 403 HEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQV 482 (725)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhc
Confidence 1111 011
Q ss_pred ccccCCCCcccEEEeCCCCCHH------HHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-
Q 005855 430 NGRFGTLTAVPIHHLDRSLDFP------ALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL- 502 (673)
Q Consensus 430 N~~~g~~~~~pV~~~~~~v~~~------el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l- 502 (673)
+-.=...+...|+|+.+.++.. ++..+|+.||+||+||++||||++++|||||| .|+|+|+.+|+.+.+
T Consensus 483 ~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G----~PvI~s~~gG~~d~V~ 558 (725)
T 3nb0_A 483 QLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMG----VPSITTNVSGFGSYME 558 (725)
T ss_dssp TCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTT----CCEEEETTBHHHHHHH
T ss_pred CCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHcC----CCEEEeCCCChhhhhh
Confidence 0000001234578888888876 58999999999999999999999999999995 999999999998877
Q ss_pred -c-------CceEEEC---CCCHHHHHHHHHHHh----cCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHhHHH
Q 005855 503 -G-------AGAILVN---PWNITEVANAIARAL----NMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 503 -g-------~~gllVn---P~D~~~lA~aI~~aL----~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~~~~ 565 (673)
+ .+|++|. |.|+++++++|.++| .+++.++..+.+++++..+.++|..-++.+++..+.+...
T Consensus 559 dg~~~~~~~~tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 559 DLIETNQAKDYGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp TTSCHHHHHHTTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 2 2589884 567777666666665 4677677777777778888999999999999888877644
No 16
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.89 E-value=5.1e-22 Score=193.93 Aligned_cols=190 Identities=21% Similarity=0.235 Sum_probs=149.8
Q ss_pred eecCcChhhhh--hhhcCChhHHHHHHHHHHhc--CCceEEEeeccc-ccCChHHHHHHHHHHH--HhCcCccCceEEEE
Q 005855 331 FPIGIDSERFI--RALEINPVQVHIKELQETFA--GRKVMLGVDRLD-MIKGIPQKLLAFEKFL--EENSDWRGKVVLLQ 403 (673)
Q Consensus 331 iP~GID~~~f~--~~~~~~~~~~~~~~lr~~~~--~~~iIl~VgRLd-~~KGi~~~L~Af~~ll--~~~P~~~~~v~Lvq 403 (673)
+|+|||++.|. +.. ....+....++++++ ++++|+++||+. +.||+..+++|+..+. +++|+ +.|++
T Consensus 2 ipngvd~~~f~~~~~~--~~~~~~~~~~r~~~~~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~----~~l~i 75 (200)
T 2bfw_A 2 SHNGIDCSFWNESYLT--GSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFII 75 (200)
T ss_dssp ---CCCTTTSSGGGSC--SCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGG----EEEEE
T ss_pred CCCccChhhccccccc--cchhhHHHHHHHHcCCCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCC----eEEEE
Confidence 69999999998 542 111222345666663 677999999999 9999999999999997 77665 55887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhc
Q 005855 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (673)
Q Consensus 404 vg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~ 483 (673)
+|... + +...++++++.+.+ .|++..|.++.+++..+|+.||++|+||..||||++++|||+||
T Consensus 76 ~G~~~----~---~~~~~l~~~~~~~~---------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G 139 (200)
T 2bfw_A 76 IGKGD----P---ELEGWARSLEEKHG---------NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG 139 (200)
T ss_dssp ECCBC----H---HHHHHHHHHHHHCT---------TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTT
T ss_pred ECCCC----h---HHHHHHHHHHHhcC---------CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCC
Confidence 77421 1 12345555555432 35643799999999999999999999999999999999999995
Q ss_pred cCCCceEEEeCCCCchhhc-cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhC
Q 005855 484 DLKKGVLILSEFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (673)
Q Consensus 484 ~~~~g~lVlSe~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 546 (673)
.|+|+|..+|..+.+ +.+|++++|.|+++++++|.++++|.++++.++.+++++++++|
T Consensus 140 ----~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~a~~~~~~f 199 (200)
T 2bfw_A 140 ----AIPIASAVGGLRDIITNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSF 199 (200)
T ss_dssp ----CEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred ----CCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc
Confidence 899999999999888 77899999999999999999999977778888888888887654
No 17
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.89 E-value=1e-22 Score=215.45 Aligned_cols=239 Identities=14% Similarity=0.008 Sum_probs=181.9
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|.++...+. .+..+.+ .+.+|..++... .+|.|.+.+....+.+.+
T Consensus 84 ~~Dvi~~~~~~~~~~~----~~~~~~p-v~~~h~~~~~~~----------------~~d~ii~~S~~~~~~~~~------ 136 (342)
T 2iuy_A 84 DVDVVHDHSGGVIGPA----GLPPGTA-FISSHHFTTRPV----------------NPVGCTYSSRAQRAHCGG------ 136 (342)
T ss_dssp CCSEEEECSSSSSCST----TCCTTCE-EEEEECSSSBCS----------------CCTTEEESCHHHHHHTTC------
T ss_pred CCCEEEECCchhhHHH----HhhcCCC-EEEecCCCCCcc----------------cceEEEEcCHHHHHHHhc------
Confidence 4699999998765443 2345678 888998875321 188888888655443321
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFLE 390 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~ 390 (673)
..++.++|+|||.+.|.+... ...++++|+++||+.+.||+..+++|++.+
T Consensus 137 --------------~~~~~vi~ngvd~~~~~~~~~-------------~~~~~~~i~~vG~~~~~Kg~~~li~a~~~~-- 187 (342)
T 2iuy_A 137 --------------GDDAPVIPIPVDPARYRSAAD-------------QVAKEDFLLFMGRVSPHKGALEAAAFAHAC-- 187 (342)
T ss_dssp --------------CTTSCBCCCCBCGGGSCCSTT-------------CCCCCSCEEEESCCCGGGTHHHHHHHHHHH--
T ss_pred --------------CCceEEEcCCCChhhcCcccc-------------cCCCCCEEEEEeccccccCHHHHHHHHHhc--
Confidence 235678999999988865321 123567899999999999999999999886
Q ss_pred hCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC--
Q 005855 391 ENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL-- 468 (673)
Q Consensus 391 ~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl-- 468 (673)
++.|+++|.+ ++.. .+++++.+++ ..|+ +.|.++.+++..+|+.||++|+||.
T Consensus 188 -------~~~l~i~G~g-----~~~~----~l~~~~~~~~--------~~v~-~~g~~~~~~l~~~~~~adv~v~ps~~~ 242 (342)
T 2iuy_A 188 -------GRRLVLAGPA-----WEPE----YFDEITRRYG--------STVE-PIGEVGGERRLDLLASAHAVLAMSQAV 242 (342)
T ss_dssp -------TCCEEEESCC-----CCHH----HHHHHHHHHT--------TTEE-ECCCCCHHHHHHHHHHCSEEEECCCCC
T ss_pred -------CcEEEEEeCc-----ccHH----HHHHHHHHhC--------CCEE-EeccCCHHHHHHHHHhCCEEEECCccc
Confidence 2457777642 2222 3333444433 1355 5799999999999999999999999
Q ss_pred --------CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc----cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 005855 469 --------RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (673)
Q Consensus 469 --------~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l----g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 536 (673)
.||||++++|||||| .|+|+|+.+|..+.+ |.+|++++| |++++|++|.++++ .
T Consensus 243 ~~~~~~~~~E~~~~~~~EAma~G----~PvI~s~~~~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~---------~ 308 (342)
T 2iuy_A 243 TGPWGGIWCEPGATVVSEAAVSG----TPVVGTGNGCLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA---------S 308 (342)
T ss_dssp CCTTCSCCCCCCCHHHHHHHHTT----CCEEECCTTTHHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC---------H
T ss_pred ccccccccccCccHHHHHHHhcC----CCEEEcCCCChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH---------H
Confidence 899999999999995 999999999999888 357999999 99999999999987 3
Q ss_pred HHhhHHH-hhCCHHHHHHHHHHHHHHhHH
Q 005855 537 WHNFTHV-TTHTAQEWAETFVSELNDTVV 564 (673)
Q Consensus 537 ~~~~~~v-~~~~~~~W~~~fl~~L~~~~~ 564 (673)
+++++++ +++++...++++++.++++..
T Consensus 309 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 337 (342)
T 2iuy_A 309 DEVRRAAVRLWGHVTIAERYVEQYRRLLA 337 (342)
T ss_dssp HHHHHHHHHHHBHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHc
Confidence 3445555 678999999999888887654
No 18
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.89 E-value=3.1e-23 Score=220.77 Aligned_cols=229 Identities=14% Similarity=0.163 Sum_probs=177.0
Q ss_pred cCCEEEEeCHHHHHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh---cCC
Q 005855 287 AADLVGFHTYDYARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF---AGR 363 (673)
Q Consensus 287 ~aDlIgF~t~~~~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~ 363 (673)
.+|.|.+.+......+.+ .++.. ..++.++|+|||.+.|.+....+ ....+++++ .++
T Consensus 136 ~~d~ii~~s~~~~~~~~~----~~~~~-----------~~~~~vi~ngv~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 196 (374)
T 2iw1_A 136 KSTKLMMLTDKQIADFQK----HYQTE-----------PERFQILPPGIYPDRKYSEQIPN----SREIYRQKNGIKEQQ 196 (374)
T ss_dssp CCCEEEESCHHHHHHHHH----HHCCC-----------GGGEEECCCCCCGGGSGGGSCTT----HHHHHHHHTTCCTTC
T ss_pred CCcEEEEcCHHHHHHHHH----HhCCC-----------hhheEEecCCcCHHhcCcccchh----HHHHHHHHhCCCCCC
Confidence 589999999876666543 22321 34788999999999987654322 223455555 367
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHh-CcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEE
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEE-NSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~~-~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (673)
++|+++||+.+.||+..+++|+..+.++ +|+ +.|+++|.+. + +.+++ ++.+.+. . ..|+
T Consensus 197 ~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~g~-----~-~~~~~----~~~~~~~----~--~~v~ 256 (374)
T 2iw1_A 197 NLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQDK-----P-RKFEA----LAEKLGV----R--SNVH 256 (374)
T ss_dssp EEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSSC-----C-HHHHH----HHHHHTC----G--GGEE
T ss_pred eEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEcCCC-----H-HHHHH----HHHHcCC----C--CcEE
Confidence 8999999999999999999999998766 454 5688887532 1 23333 3333221 1 1366
Q ss_pred EeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEEC-CCCHHHHHH
Q 005855 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVN-PWNITEVAN 519 (673)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVn-P~D~~~lA~ 519 (673)
++ |. .+++..+|+.||++|+||.+||||++++|||||| .|+|+|+.+|..+.+ +.+|++++ |.|++++|+
T Consensus 257 ~~-g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G----~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~ 329 (374)
T 2iw1_A 257 FF-SG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAG----LPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNE 329 (374)
T ss_dssp EE-SC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHT----CCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHH
T ss_pred EC-CC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHCC----CCEEEecCCCchhhhccCCceEEeCCCCCHHHHHH
Confidence 54 54 4789999999999999999999999999999995 899999999999888 57899998 999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 520 AIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 520 aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
+|.++++. ++.+.++.+++++.+.++++..|++.+.+.++..
T Consensus 330 ~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 371 (374)
T 2iw1_A 330 VLRKALTQ-SPLRMAWAENARHYADTQDLYSLPEKAADIITGG 371 (374)
T ss_dssp HHHHHHHC-HHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC
T ss_pred HHHHHHcC-hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 99999985 5577788888899999999999999988877643
No 19
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.84 E-value=4.4e-20 Score=174.97 Aligned_cols=162 Identities=13% Similarity=0.069 Sum_probs=123.1
Q ss_pred CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEE
Q 005855 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIH 442 (673)
Q Consensus 363 ~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~ 442 (673)
+.+|+++||+.+.||+..+++|+..+ +++| ++.|+++|. ++....++ +++.+.+. .+.
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~----~~~l~i~G~-----g~~~~~~~----~~~~~~~~--------~v~ 59 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQ----DIVLLLKGK-----GPDEKKIK----LLAQKLGV--------KAE 59 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGG----GEEEEEECC-----STTHHHHH----HHHHHHTC--------EEE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCC----CeEEEEEeC-----CccHHHHH----HHHHHcCC--------eEE
Confidence 46899999999999999999999987 3344 466888874 23333344 44433321 233
Q ss_pred EeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCc-eEEEeC-CCCchhhccCceEEECCCCHHHHHHH
Q 005855 443 HLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKG-VLILSE-FAGAAQSLGAGAILVNPWNITEVANA 520 (673)
Q Consensus 443 ~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g-~lVlSe-~aG~~~~lg~~gllVnP~D~~~lA~a 520 (673)
+ +.++.+++..+|+.||++|+||..||||++++|||||| . |+|++. .+|..+.+..++.+++|.|+++++++
T Consensus 60 -~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G----~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 133 (166)
T 3qhp_A 60 -F-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISVG----IVPVIANSPLSATRQFALDERSLFEPNNAKDLSAK 133 (166)
T ss_dssp -C-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTT----CCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHH
T ss_pred -E-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhcC----CCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHH
Confidence 5 89999999999999999999999999999999999994 6 777744 55555555566779999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHH
Q 005855 521 IARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (673)
Q Consensus 521 I~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (673)
|.++++. ++.+.++.+++++++++|+++.+++
T Consensus 134 i~~l~~~-~~~~~~~~~~~~~~~~~~s~~~~~~ 165 (166)
T 3qhp_A 134 IDWWLEN-KLERERMQNEYAKSALNYTLENSVI 165 (166)
T ss_dssp HHHHHHC-HHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHCChhhhhc
Confidence 9999995 5577778888888888888776654
No 20
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.83 E-value=2.4e-19 Score=196.93 Aligned_cols=175 Identities=9% Similarity=0.032 Sum_probs=129.1
Q ss_pred EEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecc-cccCChHHHHHHHHHHHHhCcCccCceEEEEEE
Q 005855 327 RVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIA 405 (673)
Q Consensus 327 ~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRL-d~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg 405 (673)
++.++|+|+|.+.|.+... ...+++.|+++||+ .+.||+..+|+|++.+.+++|+. .++.|+++|
T Consensus 218 ~~~~i~~g~d~~~~~~~~~-------------~~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG 283 (413)
T 2x0d_A 218 DEYFFQPKINTTLKNYIND-------------KRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVG 283 (413)
T ss_dssp EEEEECCCCCHHHHTTTTS-------------CCCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEE
T ss_pred ceEEeCCCcCchhhccccc-------------ccCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEc
Confidence 5788999999887753210 11356789999997 68999999999999998888852 135688888
Q ss_pred cCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccC
Q 005855 406 VPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDL 485 (673)
Q Consensus 406 ~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~ 485 (673)
.+.. . .+.+.. ..|+ |.|.++.+++.++|+.|||||+||.+||||++++||||||
T Consensus 284 ~~~~-~-------------------~~l~~~--~~v~-f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G-- 338 (413)
T 2x0d_A 284 EKHK-D-------------------IALGKG--IHLN-SLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHFG-- 338 (413)
T ss_dssp SCCC-C-------------------EEEETT--EEEE-EEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTT--
T ss_pred CCch-h-------------------hhcCCc--CcEE-EcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCC--
Confidence 4321 0 011111 1355 5789999999999999999999999999999999999994
Q ss_pred CCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCC
Q 005855 486 KKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (673)
Q Consensus 486 ~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (673)
.|+|++ .+|+.+.+ |.+|++|+|.|++++|++|.++++++. .+.+ ++++.+++++
T Consensus 339 --~PVV~~-~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~-~~~~---~~~~~~~~~~ 395 (413)
T 2x0d_A 339 --LRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN-NRDV---DKKESSNMMF 395 (413)
T ss_dssp --CEEEEE-CBTTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC-----------CCBSCGG
T ss_pred --CcEEEe-CCCcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH-HHHH---hHHHHHHhCC
Confidence 777775 46777766 678999999999999999999998654 3332 3444454443
No 21
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.80 E-value=1.7e-18 Score=184.71 Aligned_cols=270 Identities=14% Similarity=0.129 Sum_probs=175.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhh--cCCEEEEeCHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHFVSACTR 308 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~Fl~~~~r 308 (673)
..|+|++|......++..+..+..++++.++.|.. .+...+. ++...+.+.++ .+|.+...+....+.+.+
T Consensus 95 ~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~---- 167 (375)
T 3beo_A 95 KPDIVLVHGDTTTTFIASLAAFYNQIPVGHVEAGL-RTWDKYS--PYPEEMNRQLTGVMADLHFSPTAKSATNLQK---- 167 (375)
T ss_dssp CCSEEEEETTSHHHHHHHHHHHHTTCCEEEESCCC-CCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHHHH----
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEeccc-ccccccC--CChhHhhhhHHhhhhheeeCCCHHHHHHHHH----
Confidence 35999998753333332222233467777665542 2212111 22233444332 389998888766655532
Q ss_pred HhccccCCCceeeCCeeeEEEEeecC-cChhhhhhhhcCChhHHHHHHHHHHhc-CCceEEEeeccccc-CChHHHHHHH
Q 005855 309 ILGFEGTPEGVEDQGRLTRVAAFPIG-IDSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMI-KGIPQKLLAF 385 (673)
Q Consensus 309 ~l~~~~~~~~i~~~gr~~~v~viP~G-ID~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~VgRLd~~-KGi~~~L~Af 385 (673)
.|.. ..++.++|+| +|...+.+..... ..+++++. ++.+++++||+.+. ||+..+++|+
T Consensus 168 -~g~~-----------~~~i~vi~n~~~d~~~~~~~~~~~------~~~~~~~~~~~~vl~~~gr~~~~~K~~~~li~a~ 229 (375)
T 3beo_A 168 -ENKD-----------ESRIFITGNTAIDALKTTVKETYS------HPVLEKLGNNRLVLMTAHRRENLGEPMRNMFRAI 229 (375)
T ss_dssp -TTCC-----------GGGEEECCCHHHHHHHHHCCSSCC------CHHHHTTTTSEEEEEECCCGGGTTHHHHHHHHHH
T ss_pred -cCCC-----------cccEEEECChhHhhhhhhhhhhhh------HHHHHhccCCCeEEEEecccccchhHHHHHHHHH
Confidence 2321 2468899999 8887765421111 12333343 34467799999986 9999999999
Q ss_pred HHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEE
Q 005855 386 EKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALV 465 (673)
Q Consensus 386 ~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv 465 (673)
+++.+++|+++ ++ ++.. ++ .+++++++++++. . ..|++ .+.++..++..+|+.||++|+
T Consensus 230 ~~l~~~~~~~~----~i-~~~g-----~~-~~~~~~~~~~~~~-------~--~~v~~-~g~~~~~~~~~~~~~ad~~v~ 288 (375)
T 3beo_A 230 KRLVDKHEDVQ----VV-YPVH-----MN-PVVRETANDILGD-------Y--GRIHL-IEPLDVIDFHNVAARSYLMLT 288 (375)
T ss_dssp HHHHHHCTTEE----EE-EECC-----SC-HHHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHTCSEEEE
T ss_pred HHHHhhCCCeE----EE-EeCC-----CC-HHHHHHHHHHhhc-------c--CCEEE-eCCCCHHHHHHHHHhCcEEEE
Confidence 99988888653 44 3321 11 1345555555321 0 13554 578898999999999999999
Q ss_pred cCCCcCCChhHHHHHhhccCCCceEEEeCC-CCchhhc-cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH
Q 005855 466 TSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (673)
Q Consensus 466 ~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~-aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 543 (673)
|| |.+++|||||| .|+|+|.. +|..+.+ ..+|++|++ |++++|++|.++++.+ +.++++.++++++.
T Consensus 289 ~s-----g~~~lEA~a~G----~Pvi~~~~~~~~~e~v~~g~g~~v~~-d~~~la~~i~~ll~~~-~~~~~~~~~~~~~~ 357 (375)
T 3beo_A 289 DS-----GGVQEEAPSLG----VPVLVLRDTTERPEGIEAGTLKLAGT-DEETIFSLADELLSDK-EAHDKMSKASNPYG 357 (375)
T ss_dssp CC-----HHHHHHHHHHT----CCEEECSSCCSCHHHHHTTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHCCCCCTTC
T ss_pred CC-----CChHHHHHhcC----CCEEEecCCCCCceeecCCceEEcCC-CHHHHHHHHHHHHhCh-HhHhhhhhcCCCCC
Confidence 99 67799999995 89999964 7776666 238999987 9999999999999854 46666666667776
Q ss_pred hhCCHHHHHHHHHH
Q 005855 544 TTHTAQEWAETFVS 557 (673)
Q Consensus 544 ~~~~~~~W~~~fl~ 557 (673)
..++++..++.+.+
T Consensus 358 ~~~~~~~i~~~~~~ 371 (375)
T 3beo_A 358 DGRASERIVEAILK 371 (375)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHH
Confidence 66666666665544
No 22
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.79 E-value=4e-19 Score=194.33 Aligned_cols=240 Identities=10% Similarity=-0.011 Sum_probs=158.5
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcc-hHHHHhhhcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r-~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
..|+||.++.....+..+.+.. +.++.+.+|....- ..+...+.. ......+..+|.|...+....+.
T Consensus 124 ~~DvIh~~~~~~~~~~~~~~~~--~~p~v~~~h~~~~~-~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~-------- 192 (406)
T 2hy7_A 124 ESDVIVFESGIAVAFIELAKRV--NPAAKLVYRASDGL-STINVASYIEREFDRVAPTLDVIALVSPAMAAE-------- 192 (406)
T ss_dssp HCSEEEEESSGGGGGHHHHHHH--CTTSEEEEEESSCH-HHHTCCHHHHHHHHHHGGGCSEEEESCGGGGGG--------
T ss_pred CCCEEEECCchHHHHHHHHHHh--CCCEEEEEeccchh-hcccccHHHHHHHHHHHHhCCEEEEcCHHHHHH--------
Confidence 4588885443322222334433 35566667764320 111111111 12223355677776655422111
Q ss_pred hccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHHHHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLAFEKFL 389 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~Af~~ll 389 (673)
+.-.+ ++.++|+|||.+.|.+.... ...++++|+++||+.+.||+ ++.+.
T Consensus 193 ---------~~~~~---~i~vipngvd~~~f~~~~~~------------~~~~~~~i~~vGrl~~~Kg~------~~~l~ 242 (406)
T 2hy7_A 193 ---------VVSRD---NVFHVGHGVDHNLDQLGDPS------------PYAEGIHAVAVGSMLFDPEF------FVVAS 242 (406)
T ss_dssp ---------CSCST---TEEECCCCBCTTHHHHHCSC------------SCCSSEEEEEECCTTBCHHH------HHHHH
T ss_pred ---------HHhcC---CEEEEcCCcChHhcCccccc------------ccCCCcEEEEEeccccccCH------HHHHH
Confidence 11112 78999999999988754221 11244899999999999999 45555
Q ss_pred HhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCC
Q 005855 390 EENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR 469 (673)
Q Consensus 390 ~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~ 469 (673)
++.|+ +.|+++|.+ + +. +.|.. ..|+ |.|.++.+++.++|+.||++|+||..
T Consensus 243 ~~~~~----~~l~ivG~g-----~------------~~----~~~l~--~~V~-f~G~~~~~~l~~~~~~adv~v~ps~~ 294 (406)
T 2hy7_A 243 KAFPQ----VTFHVIGSG-----M------------GR----HPGYG--DNVI-VYGEMKHAQTIGYIKHARFGIAPYAS 294 (406)
T ss_dssp HHCTT----EEEEEESCS-----S------------CC----CTTCC--TTEE-EECCCCHHHHHHHHHTCSEEECCBSC
T ss_pred HhCCC----eEEEEEeCc-----h------------HH----hcCCC--CCEE-EcCCCCHHHHHHHHHhcCEEEECCCc
Confidence 66775 458888632 2 11 11211 1366 46899999999999999999999999
Q ss_pred cCCChhHHHHH-------hhccCCCceEEEeCCCCchhhc-cCceEE-ECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhh
Q 005855 470 DGMNLVSYEFV-------ACQDLKKGVLILSEFAGAAQSL-GAGAIL-VNPWNITEVANAIARALNMSPEEREKRHWHNF 540 (673)
Q Consensus 470 EGf~Lv~lEam-------A~~~~~~g~lVlSe~aG~~~~l-g~~gll-VnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~ 540 (673)
||||++++||| ||| .|+|+|+. .. +.+|++ |+|.|++++|++|.++++++. +
T Consensus 295 E~~~~~~lEAm~Kl~eYla~G----~PVIas~~-----v~~~~~G~l~v~~~d~~~la~ai~~ll~~~~----------~ 355 (406)
T 2hy7_A 295 EQVPVYLADSSMKLLQYDFFG----LPAVCPNA-----VVGPYKSRFGYTPGNADSVIAAITQALEAPR----------V 355 (406)
T ss_dssp SCCCTTHHHHCHHHHHHHHHT----CCEEEEGG-----GTCSCSSEEEECTTCHHHHHHHHHHHHHCCC----------C
T ss_pred ccCchHHHHHHHHHHHHhhCC----CcEEEehh-----cccCcceEEEeCCCCHHHHHHHHHHHHhCcc----------h
Confidence 99999999999 995 89999987 22 568999 999999999999999998774 1
Q ss_pred HHHhhCCHHHHHHHHHHH
Q 005855 541 THVTTHTAQEWAETFVSE 558 (673)
Q Consensus 541 ~~v~~~~~~~W~~~fl~~ 558 (673)
+..++++++..++++++.
T Consensus 356 ~~~~~~sw~~~a~~~~~~ 373 (406)
T 2hy7_A 356 RYRQCLNWSDTTDRVLDP 373 (406)
T ss_dssp CCSCCCBHHHHHHHHHCG
T ss_pred hhhhcCCHHHHHHHHHHh
Confidence 345678877777776543
No 23
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.79 E-value=6.8e-18 Score=180.80 Aligned_cols=274 Identities=13% Similarity=0.129 Sum_probs=174.5
Q ss_pred CCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhh--hcCCEEEEeCHHHHHHHHHHHHHH
Q 005855 232 GDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHFVSACTRI 309 (673)
Q Consensus 232 ~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~l--l~aDlIgF~t~~~~~~Fl~~~~r~ 309 (673)
.|+|++|+.....++..+..+..++++.+..|... +...+. ++.....+.+ ..+|.+...+....+.|..
T Consensus 87 pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~d~ii~~s~~~~~~l~~----- 158 (384)
T 1vgv_A 87 PDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLR-TGDLYS--PWPEEANRTLTGHLAMYHFSPTETSRQNLLR----- 158 (384)
T ss_dssp CSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCC-CSCTTS--STTHHHHHHHHHTTCSEEEESSHHHHHHHHH-----
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEecccc-cccccC--CCchHhhHHHHHhhccEEEcCcHHHHHHHHH-----
Confidence 59999997533333433333445678877766432 212111 1122223322 2389998888766655532
Q ss_pred hccccCCCceeeCCeeeEEEEeecCc-ChhhhhhhhcCChhHHHHHHHHHHhc----CC-ceEEEeeccccc-CChHHHH
Q 005855 310 LGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFA----GR-KVMLGVDRLDMI-KGIPQKL 382 (673)
Q Consensus 310 l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~----~~-~iIl~VgRLd~~-KGi~~~L 382 (673)
.|.. ..++.++|+|+ |...+.+....+. ......++++++ ++ .+++++||+.+. ||+..++
T Consensus 159 ~g~~-----------~~~i~vi~n~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vl~~~gr~~~~~kg~~~li 226 (384)
T 1vgv_A 159 ENVA-----------DSRIFITGNTVIDALLWVRDQVMSS-DKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEIC 226 (384)
T ss_dssp TTCC-----------GGGEEECCCHHHHHHHHHHHHTTTC-HHHHHHHHTTCTTCCTTSEEEEEECCCBSSCCHHHHHHH
T ss_pred cCCC-----------hhhEEEeCChHHHHHHhhhhccccc-hhhhHHHHHhccccCCCCCEEEEEeCCccccchHHHHHH
Confidence 2321 23678899995 5433322110000 001123444432 33 467899999987 9999999
Q ss_pred HHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCE
Q 005855 383 LAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDV 462 (673)
Q Consensus 383 ~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv 462 (673)
+|+.++.+++|++ .|++++++ ++ .++++++++++. . ..|++ .+.++.+++..+|+.||+
T Consensus 227 ~a~~~l~~~~~~~----~l~i~~g~----~~---~~~~~l~~~~~~-------~--~~v~~-~g~~~~~~~~~~~~~ad~ 285 (384)
T 1vgv_A 227 HALADIATTHQDI----QIVYPVHL----NP---NVREPVNRILGH-------V--KNVIL-IDPQEYLPFVWLMNHAWL 285 (384)
T ss_dssp HHHHHHHHHCTTE----EEEEECCB----CH---HHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHHCSE
T ss_pred HHHHHHHhhCCCe----EEEEEcCC----CH---HHHHHHHHHhhc-------C--CCEEE-eCCCCHHHHHHHHHhCcE
Confidence 9999999888764 46554322 22 234555555421 0 13654 577888999999999999
Q ss_pred EEEcCCCcCCChhHHHHHhhccCCCceEEEeCC-CCchhhc--cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHh
Q 005855 463 ALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-AGAAQSL--GAGAILVNPWNITEVANAIARALNMSPEEREKRHWHN 539 (673)
Q Consensus 463 ~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~-aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~ 539 (673)
+|.|| |.+++|||||| .|+|+|.. +|..+.+ | +|++|+| |++++|++|.++|+++ +.++++.+++
T Consensus 286 ~v~~S-----g~~~lEA~a~G----~PvI~~~~~~~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d~-~~~~~~~~~~ 353 (384)
T 1vgv_A 286 ILTDS-----GGIQEEAPSLG----KPVLVMRDTTERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDE-NEYQAMSRAH 353 (384)
T ss_dssp EEESS-----STGGGTGGGGT----CCEEEESSCCSCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHCH-HHHHHHHSSC
T ss_pred EEECC-----cchHHHHHHcC----CCEEEccCCCCcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhCh-HHHhhhhhcc
Confidence 99999 44589999995 89999987 6766666 4 8999988 9999999999999854 4666666666
Q ss_pred hHHHhhCCHHHHHHHHHHH
Q 005855 540 FTHVTTHTAQEWAETFVSE 558 (673)
Q Consensus 540 ~~~v~~~~~~~W~~~fl~~ 558 (673)
+++...++++..++.+++.
T Consensus 354 ~~~~~~~~~~~i~~~~~~~ 372 (384)
T 1vgv_A 354 NPYGDGQACSRILEALKNN 372 (384)
T ss_dssp CTTCCSCHHHHHHHHHHHT
T ss_pred CCCcCCCHHHHHHHHHHHH
Confidence 7666666666666555443
No 24
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.74 E-value=6.7e-18 Score=162.87 Aligned_cols=142 Identities=18% Similarity=0.160 Sum_probs=113.8
Q ss_pred cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 361 AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 361 ~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
.++++|+++||+.+.||+..+++|++.+ |+ +.|+++|... +...+++.++++ ..+ .. ..
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l----~~----~~l~i~G~~~-----~~~~l~~~~~~~--~~~----l~--~~ 79 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL----QD----EKLYIVGWFS-----KGDHAERYARKI--MKI----AP--DN 79 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC----TT----SCEEEEBCCC-----TTSTHHHHHHHH--HHH----SC--TT
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC----CC----cEEEEEecCc-----cHHHHHHHHHhh--hcc----cC--Cc
Confidence 3678999999999999999999999986 44 4477777432 112333333311 111 11 13
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHH
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVA 518 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA 518 (673)
|.+ .|.++.+++..+|+.||++|+||..||||++++|||||+ .|+|+|..+|..+.+ +.+|+++ +.|+++++
T Consensus 80 v~~-~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G----~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~ 153 (177)
T 2f9f_A 80 VKF-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASG----KPVIAVNEGGFKETVINEKTGYLV-NADVNEII 153 (177)
T ss_dssp EEE-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTT----CCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHH
T ss_pred EEE-eCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcC----CcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHH
Confidence 554 689999999999999999999999999999999999995 899999998888887 5689999 99999999
Q ss_pred HHHHHHhcCCH
Q 005855 519 NAIARALNMSP 529 (673)
Q Consensus 519 ~aI~~aL~m~~ 529 (673)
++|.++++++.
T Consensus 154 ~~i~~l~~~~~ 164 (177)
T 2f9f_A 154 DAMKKVSKNPD 164 (177)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCHH
Confidence 99999998875
No 25
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.69 E-value=2.1e-16 Score=178.81 Aligned_cols=199 Identities=13% Similarity=0.030 Sum_probs=148.0
Q ss_pred eEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh--cCCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE
Q 005855 326 TRVAAFPIGIDSERFIRALEINPVQVHIKELQETF--AGRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ 403 (673)
Q Consensus 326 ~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~--~~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvq 403 (673)
.++.++|+++++....+..... ..++++ ++.++++++||+.+ ||++.+|+|+.++++++|++ .|++
T Consensus 344 ~~i~~ipn~~~~~~~~~~~~~~-------~~r~~~~~~~~~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~----~l~i 411 (568)
T 2vsy_A 344 EHVLRLQGAFQPSDTSRVVAEP-------PSRTQCGLPEQGVVLCCFNNSY-KLNPQSMARMLAVLREVPDS----VLWL 411 (568)
T ss_dssp SEEEECSSCSCCCCTTCCCCCC-------CCTGGGTCCTTSCEEEECCCGG-GCCHHHHHHHHHHHHHCTTC----EEEE
T ss_pred ceeEcCCCcCCCCCCCCCCCCC-------CCccccCCCCCCEEEEeCCccc-cCCHHHHHHHHHHHHhCCCc----EEEE
Confidence 5788999965543221110000 122333 34567889999999 99999999999999999875 4887
Q ss_pred EEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhc
Q 005855 404 IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (673)
Q Consensus 404 vg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~ 483 (673)
+|. +++.. +++++++.+.+. . ...|+ |.|.++.+++..+|+.|||||+||.+ |||++++||||||
T Consensus 412 ~G~----~g~~~----~~l~~~~~~~~l----~-~~~v~-~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G 476 (568)
T 2vsy_A 412 LSG----PGEAD----ARLRAFAHAQGV----D-AQRLV-FMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWTG 476 (568)
T ss_dssp ECC----STTHH----HHHHHHHHHTTC----C-GGGEE-EECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTT
T ss_pred ecC----CHHHH----HHHHHHHHHcCC----C-hhHEE-eeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCC
Confidence 762 23433 344444444321 1 01355 47899999999999999999999999 9999999999995
Q ss_pred cCCCceEEE-------eCCC-------CchhhccCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH---hhC
Q 005855 484 DLKKGVLIL-------SEFA-------GAAQSLGAGAILVNPWNITEVANAIARALNMSPEEREKRHWHNFTHV---TTH 546 (673)
Q Consensus 484 ~~~~g~lVl-------Se~a-------G~~~~lg~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v---~~~ 546 (673)
.|+|+ |+.+ |+.+.+ .+ |+++++++|.++++.+ +.+..+.+++++.+ ..+
T Consensus 477 ----~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v-~~-------~~~~la~~i~~l~~~~-~~~~~~~~~~~~~~~~~~~f 543 (568)
T 2vsy_A 477 ----CPVLTTPGETFAARVAGSLNHHLGLDEMN-VA-------DDAAFVAKAVALASDP-AALTALHARVDVLRRASGVF 543 (568)
T ss_dssp ----CCEEBCCCSSGGGSHHHHHHHHHTCGGGB-CS-------SHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTT
T ss_pred ----CCEEeccCCCchHHHHHHHHHHCCChhhh-cC-------CHHHHHHHHHHHhcCH-HHHHHHHHHHHHhhhcCCCC
Confidence 89999 8888 887776 22 8999999999999864 46777778888888 678
Q ss_pred CHHHHHHHHHHHHHHhHH
Q 005855 547 TAQEWAETFVSELNDTVV 564 (673)
Q Consensus 547 ~~~~W~~~fl~~L~~~~~ 564 (673)
++...++.+++.+++...
T Consensus 544 ~~~~~~~~~~~~y~~~~~ 561 (568)
T 2vsy_A 544 HMDGFADDFGALLQALAR 561 (568)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999888876654
No 26
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.67 E-value=1.3e-15 Score=162.96 Aligned_cols=253 Identities=15% Similarity=0.118 Sum_probs=156.5
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhh--hcCCEEEEeCHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHF 302 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~l--l~aDlIgF~t~~~~~~F 302 (673)
+.+..+ .|+|++|++....++..+..+..++++.+ .|.++.+...+. ++.....+.+ ..+|.+...+....+.|
T Consensus 86 ~l~~~~-pDvv~~~~~~~~~~~~~~~a~~~~ip~v~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~l 161 (376)
T 1v4v_A 86 ALKEMG-ADYVLVHGDTLTTFAVAWAAFLEGIPVGH-VEAGLRSGNLKE--PFPEEANRRLTDVLTDLDFAPTPLAKANL 161 (376)
T ss_dssp HHHHTT-CSEEEEESSCHHHHHHHHHHHHTTCCEEE-ETCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred HHHHcC-CCEEEEeCChHHHHHHHHHHHHhCCCEEE-EeCCCccccccC--CCchHHHHHHHHHHhceeeCCCHHHHHHH
Confidence 334444 49999998765555544433344677754 454443222211 1222233322 24788888877655554
Q ss_pred HHHHHHHhccccCCCceeeCCeeeEEEEeecCc-ChhhhhhhhcCChhHHHHHHHHHHhc-CCceEEEeecccccCChHH
Q 005855 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFA-GRKVMLGVDRLDMIKGIPQ 380 (673)
Q Consensus 303 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~-~~~iIl~VgRLd~~KGi~~ 380 (673)
.+ .|. ...++.++|+++ |...+.+.. ..++++++ ++.+++++||+...||+..
T Consensus 162 ~~-----~g~-----------~~~ki~vi~n~~~d~~~~~~~~---------~~~~~~~~~~~~vl~~~gr~~~~k~~~~ 216 (376)
T 1v4v_A 162 LK-----EGK-----------REEGILVTGQTGVDAVLLAAKL---------GRLPEGLPEGPYVTVTMHRRENWPLLSD 216 (376)
T ss_dssp HT-----TTC-----------CGGGEEECCCHHHHHHHHHHHH---------CCCCTTCCSSCEEEECCCCGGGGGGHHH
T ss_pred HH-----cCC-----------CcceEEEECCchHHHHhhhhhh---------hHHHHhcCCCCEEEEEeCcccchHHHHH
Confidence 32 122 124677888854 543332110 01222233 3456678999999999999
Q ss_pred HHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHc
Q 005855 381 KLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVT 460 (673)
Q Consensus 381 ~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~A 460 (673)
+++|++.+.+++|+++ |++++++ ++ .++++++++++. . ..|++ .+.++..++..+|+.|
T Consensus 217 ll~a~~~l~~~~~~~~----lv~~~g~----~~---~~~~~l~~~~~~-------~--~~v~~-~g~~g~~~~~~~~~~a 275 (376)
T 1v4v_A 217 LAQALKRVAEAFPHLT----FVYPVHL----NP---VVREAVFPVLKG-------V--RNFVL-LDPLEYGSMAALMRAS 275 (376)
T ss_dssp HHHHHHHHHHHCTTSE----EEEECCS----CH---HHHHHHHHHHTT-------C--TTEEE-ECCCCHHHHHHHHHTE
T ss_pred HHHHHHHHHhhCCCeE----EEEECCC----CH---HHHHHHHHHhcc-------C--CCEEE-ECCCCHHHHHHHHHhC
Confidence 9999999988888753 5544222 22 234455555421 1 14654 5778888999999999
Q ss_pred CEEEEcCCCcCCChhHHHHHhhccCCCceEEEeC-CCCchhhc-cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 005855 461 DVALVTSLRDGMNLVSYEFVACQDLKKGVLILSE-FAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHWH 538 (673)
Q Consensus 461 Dv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe-~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~~ 538 (673)
|++|.|| +|+ .+|||||| .|+|++. .+|..+.+ +.+|++|+ .|++++|++|.++|+.+ +.++++.+.
T Consensus 276 d~~v~~S--~g~---~lEA~a~G----~PvI~~~~~~~~~~~~~~g~g~lv~-~d~~~la~~i~~ll~d~-~~~~~~~~~ 344 (376)
T 1v4v_A 276 LLLVTDS--GGL---QEEGAALG----VPVVVLRNVTERPEGLKAGILKLAG-TDPEGVYRVVKGLLENP-EELSRMRKA 344 (376)
T ss_dssp EEEEESC--HHH---HHHHHHTT----CCEEECSSSCSCHHHHHHTSEEECC-SCHHHHHHHHHHHHTCH-HHHHHHHHS
T ss_pred cEEEECC--cCH---HHHHHHcC----CCEEeccCCCcchhhhcCCceEECC-CCHHHHHHHHHHHHhCh-Hhhhhhccc
Confidence 9999999 543 88999995 8888875 45655555 34688886 49999999999999854 355554443
No 27
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.65 E-value=1.8e-15 Score=163.63 Aligned_cols=250 Identities=12% Similarity=-0.023 Sum_probs=158.0
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVS 304 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~ 304 (673)
+++..+| |+|+++.++++. .++..... ++.+..+. +.. +.-....+..+|.|.+++....+.|.+
T Consensus 106 ~l~~~~p-Div~~~~~~~~~--~~~~~~~~--p~~~~~~~-~~~---------~~~~~~~~~~~d~ii~~S~~~~~~l~~ 170 (374)
T 2xci_A 106 FEELSKP-KALIVVEREFWP--SLIIFTKV--PKILVNAY-AKG---------SLIEKILSKKFDLIIMRTQEDVEKFKT 170 (374)
T ss_dssp HHHHHCC-SEEEEESCCCCH--HHHHHCCS--CEEEEEEC-CCC---------CHHHHHHHTTCSEEEESCHHHHHHHHT
T ss_pred HHHHhCC-CEEEEECccCcH--HHHHHHhC--CEEEEEee-cCc---------hHHHHHHHHhCCEEEECCHHHHHHHHH
Confidence 3444455 899888777653 33332222 44443332 211 111112245699999999887766532
Q ss_pred HHHHHhccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCChHHHHHH
Q 005855 305 ACTRILGFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKGIPQKLLA 384 (673)
Q Consensus 305 ~~~r~l~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KGi~~~L~A 384 (673)
+| .. ++.++|+|. |..... + +..+ .+++++++++ ..||+..+++|
T Consensus 171 -----~g------------~~-ki~vi~n~~----f~~~~~-~---------~~~l-~~~vi~~~~~--~~k~~~~ll~A 215 (374)
T 2xci_A 171 -----FG------------AK-RVFSCGNLK----FICQKG-K---------GIKL-KGEFIVAGSI--HTGEVEIILKA 215 (374)
T ss_dssp -----TT------------CC-SEEECCCGG----GCCCCC-S---------CCCC-SSCEEEEEEE--CGGGHHHHHHH
T ss_pred -----cC------------CC-eEEEcCCCc----cCCCcC-h---------hhhh-cCCEEEEEeC--CCchHHHHHHH
Confidence 12 12 677888863 221110 0 0011 2367777776 46899999999
Q ss_pred HHHHHHhCcCccCceEEEEEEcCCCCChHHH-HHHHHHHHHHHHhhccccCC--CCcccEEEeCCCCCHHHHHHHHHHcC
Q 005855 385 FEKFLEENSDWRGKVVLLQIAVPTRTDVPEY-QRLTSQVHEIVGRINGRFGT--LTAVPIHHLDRSLDFPALCALYAVTD 461 (673)
Q Consensus 385 f~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey-~~l~~~l~~lv~~IN~~~g~--~~~~pV~~~~~~v~~~el~aly~~AD 461 (673)
+.++.+++|+++ |+++|. +++. ++++ +++.+.+-.+.. .+...|. +.+. .+++..+|+.||
T Consensus 216 ~~~l~~~~p~~~----lvivG~-----g~~~~~~l~----~~~~~~gl~~~~~~~~~~~v~-~~~~--~~dl~~~y~~aD 279 (374)
T 2xci_A 216 FKEIKKTYSSLK----LILVPR-----HIENAKIFE----KKARDFGFKTSFFENLEGDVI-LVDR--FGILKELYPVGK 279 (374)
T ss_dssp HHHHHTTCTTCE----EEEEES-----SGGGHHHHH----HHHHHTTCCEEETTCCCSSEE-ECCS--SSCHHHHGGGEE
T ss_pred HHHHHhhCCCcE----EEEECC-----CHHHHHHHH----HHHHHCCCceEEecCCCCcEE-EECC--HHHHHHHHHhCC
Confidence 999988888764 887873 3433 2444 444433321100 0001243 4443 378999999999
Q ss_pred EEEEcCC-CcCCChhHHHHHhhccCCCceEEEe-CCCCchhhc---cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 005855 462 VALVTSL-RDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL---GAGAILVNPWNITEVANAIARALNMSPEEREKRH 536 (673)
Q Consensus 462 v~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlS-e~aG~~~~l---g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~ 536 (673)
++++||. .|++|++++|||||| .|+|++ +.+|+.+.+ +.+|.++.|.|++++|++|.++|+. +.+++++
T Consensus 280 v~vl~ss~~e~gg~~~lEAmA~G----~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~mg 353 (374)
T 2xci_A 280 IAIVGGTFVNIGGHNLLEPTCWG----IPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKVE 353 (374)
T ss_dssp EEEECSSSSSSCCCCCHHHHTTT----CCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCHH
T ss_pred EEEECCcccCCCCcCHHHHHHhC----CCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHHH
Confidence 9888764 577899999999994 788876 556666654 2578899999999999999999985 5777788
Q ss_pred HHhhHHHhhC
Q 005855 537 WHNFTHVTTH 546 (673)
Q Consensus 537 ~~~~~~v~~~ 546 (673)
++++++++++
T Consensus 354 ~~ar~~~~~~ 363 (374)
T 2xci_A 354 EKSREIKGCY 363 (374)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 8888887654
No 28
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.64 E-value=2.9e-15 Score=159.09 Aligned_cols=249 Identities=14% Similarity=0.010 Sum_probs=160.6
Q ss_pred CCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhhcCCEEEEeCHHHHHHHHHHHHHHh
Q 005855 231 DGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVLAADLVGFHTYDYARHFVSACTRIL 310 (673)
Q Consensus 231 ~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll~aDlIgF~t~~~~~~Fl~~~~r~l 310 (673)
..|+|++|.....+...++. +..++++.+..|..+|..- ...+ ...+|.+...+..
T Consensus 96 ~pDvv~~~~~~~~~~~~~~~-~~~~~p~v~~~~~~~~~~~--------~~~~--~~~~d~v~~~~~~------------- 151 (364)
T 1f0k_A 96 KPDVVLGMGGYVSGPGGLAA-WSLGIPVVLHEQNGIAGLT--------NKWL--AKIATKVMQAFPG------------- 151 (364)
T ss_dssp CCSEEEECSSTTHHHHHHHH-HHTTCCEEEEECSSSCCHH--------HHHH--TTTCSEEEESSTT-------------
T ss_pred CCCEEEEeCCcCchHHHHHH-HHcCCCEEEEecCCCCcHH--------HHHH--HHhCCEEEecChh-------------
Confidence 35999999754333222333 3346778888887654310 1111 1235655432210
Q ss_pred ccccCCCceeeCCeeeEEEEeecCcChhhhhhhhcCChhHHHHHHHHHHh-cCCc-eEEEeecccccCChHHHHHHHHHH
Q 005855 311 GFEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALEINPVQVHIKELQETF-AGRK-VMLGVDRLDMIKGIPQKLLAFEKF 388 (673)
Q Consensus 311 ~~~~~~~~i~~~gr~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~-~~~~-iIl~VgRLd~~KGi~~~L~Af~~l 388 (673)
. +. ++.++|+|||.+.|.+. . .. +.+ .. .+++ +++++||+.+.||++.+++|++.+
T Consensus 152 -------~--~~----~~~~i~n~v~~~~~~~~---~-~~---~~~--~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l 209 (364)
T 1f0k_A 152 -------A--FP----NAEVVGNPVRTDVLALP---L-PQ---QRL--AGREGPVRVLVVGGSQGARILNQTMPQVAAKL 209 (364)
T ss_dssp -------S--SS----SCEECCCCCCHHHHTSC---C-HH---HHH--TTCCSSEEEEEECTTTCCHHHHHHHHHHHHHH
T ss_pred -------h--cC----CceEeCCccchhhcccc---h-hh---hhc--ccCCCCcEEEEEcCchHhHHHHHHHHHHHHHh
Confidence 0 11 45689999999877531 1 10 111 11 2445 455667999999999999999987
Q ss_pred HHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCC
Q 005855 389 LEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSL 468 (673)
Q Consensus 389 l~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl 468 (673)
.+ ++.++.++++ ++ ++++ ++++.+.+. ..|.+ .|.+ +++..+|+.||++|+||
T Consensus 210 ~~-------~~~~l~i~G~----~~-~~~l----~~~~~~~~~-------~~v~~-~g~~--~~~~~~~~~ad~~v~~s- 262 (364)
T 1f0k_A 210 GD-------SVTIWHQSGK----GS-QQSV----EQAYAEAGQ-------PQHKV-TEFI--DDMAAAYAWADVVVCRS- 262 (364)
T ss_dssp GG-------GEEEEEECCT----TC-HHHH----HHHHHHTTC-------TTSEE-ESCC--SCHHHHHHHCSEEEECC-
T ss_pred cC-------CcEEEEEcCC----ch-HHHH----HHHHhhcCC-------CceEE-ecch--hhHHHHHHhCCEEEECC-
Confidence 43 2443333322 22 2333 334433221 13554 4666 78999999999999999
Q ss_pred CcCCChhHHHHHhhccCCCceEEEeCCCCch-------hhc--cCceEEECCCC--HHHHHHHHHHHhcCCHHHHHHHHH
Q 005855 469 RDGMNLVSYEFVACQDLKKGVLILSEFAGAA-------QSL--GAGAILVNPWN--ITEVANAIARALNMSPEEREKRHW 537 (673)
Q Consensus 469 ~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~-------~~l--g~~gllVnP~D--~~~lA~aI~~aL~m~~~er~~r~~ 537 (673)
| +++++|||+|| .|+|+|..+|.. +.+ ...|++++|.| ++++|++|.++ .++.+.++.+
T Consensus 263 --g-~~~~~EAma~G----~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l---~~~~~~~~~~ 332 (364)
T 1f0k_A 263 --G-ALTVSEIAAAG----LPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW---SRETLLTMAE 332 (364)
T ss_dssp --C-HHHHHHHHHHT----CCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC---CHHHHHHHHH
T ss_pred --c-hHHHHHHHHhC----CCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc---CHHHHHHHHH
Confidence 4 99999999995 899999988763 234 33599999988 99999999988 4667777778
Q ss_pred HhhHHHhhCCHHHHHHHHHHHHHHh
Q 005855 538 HNFTHVTTHTAQEWAETFVSELNDT 562 (673)
Q Consensus 538 ~~~~~v~~~~~~~W~~~fl~~L~~~ 562 (673)
++++.+.+++++.-++.+++.+++.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 333 RARAASIPDATERVANEVSRVARAL 357 (364)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHTTC
T ss_pred HHHHhhccCHHHHHHHHHHHHHHHH
Confidence 8888888887777777776666543
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.47 E-value=2.3e-12 Score=140.51 Aligned_cols=263 Identities=15% Similarity=0.133 Sum_probs=162.1
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhh--hcCCEEEEeCHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHF 302 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~l--l~aDlIgF~t~~~~~~F 302 (673)
+++..+ +|+|++|+.-...++..+..+..++|++.+ |.+..+...+. ++.+++.+-+ ..+|++...+....++|
T Consensus 106 ~l~~~k-PDvVi~~g~~~~~~~~~~aa~~~~IPv~h~-~ag~rs~~~~~--~~~~~~~r~~~~~~a~~~~~~se~~~~~l 181 (396)
T 3dzc_A 106 VLSSEQ-PDVVLVHGDTATTFAASLAAYYQQIPVGHV-EAGLRTGNIYS--PWPEEGNRKLTAALTQYHFAPTDTSRANL 181 (396)
T ss_dssp HHHHHC-CSEEEEETTSHHHHHHHHHHHTTTCCEEEE-TCCCCCSCTTS--STTHHHHHHHHHHTCSEEEESSHHHHHHH
T ss_pred HHHhcC-CCEEEEECCchhHHHHHHHHHHhCCCEEEE-ECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHH
Confidence 334445 499999986666666555555667887643 33332322221 3444555544 36899988888877776
Q ss_pred HHHHHHHhccccCCCceeeCCeeeEEEEeec-CcChhhhhhhhcCChhHHHHHHHHHHhc----CCce-EEEeecccc-c
Q 005855 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFA----GRKV-MLGVDRLDM-I 375 (673)
Q Consensus 303 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~----~~~i-Il~VgRLd~-~ 375 (673)
.+ .|.+ ..+|.++++ ++|...+.+... ........+++++++ ++++ ++..+|... .
T Consensus 182 ~~-----~G~~-----------~~ki~vvGn~~~d~~~~~~~~~-~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~ 244 (396)
T 3dzc_A 182 LQ-----ENYN-----------AENIFVTGNTVIDALLAVREKI-HTDMDLQATLESQFPMLDASKKLILVTGHRRESFG 244 (396)
T ss_dssp HH-----TTCC-----------GGGEEECCCHHHHHHHHHHHHH-HHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCT
T ss_pred HH-----cCCC-----------cCcEEEECCcHHHHHHHhhhhc-ccchhhHHHHHHHhCccCCCCCEEEEEECCcccch
Confidence 53 2322 235677776 456443322110 000011245666553 3454 446678654 4
Q ss_pred CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHH
Q 005855 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 455 (673)
Q Consensus 376 KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~a 455 (673)
|++..+++|++.+.+++|++ .+++++.+ .+ .+++.++++.+ . ...|+ +.+.++..++..
T Consensus 245 ~~~~~ll~A~~~l~~~~~~~----~~v~~~g~----~~---~~~~~l~~~~~-------~--~~~v~-~~~~lg~~~~~~ 303 (396)
T 3dzc_A 245 GGFERICQALITTAEQHPEC----QILYPVHL----NP---NVREPVNKLLK-------G--VSNIV-LIEPQQYLPFVY 303 (396)
T ss_dssp THHHHHHHHHHHHHHHCTTE----EEEEECCB----CH---HHHHHHHHHTT-------T--CTTEE-EECCCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCc----eEEEEeCC----Ch---HHHHHHHHHHc-------C--CCCEE-EeCCCCHHHHHH
Confidence 88999999999999888874 35544322 13 23444444321 1 12455 457888889999
Q ss_pred HHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEe-CCCCchhhcc-CceEEECCCCHHHHHHHHHHHhcCCHHHHH
Q 005855 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSLG-AGAILVNPWNITEVANAIARALNMSPEERE 533 (673)
Q Consensus 456 ly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlS-e~aG~~~~lg-~~gllVnP~D~~~lA~aI~~aL~m~~~er~ 533 (673)
+|+.||++|.+| | |++ +|||+|+ .|+|++ +.++..+.+. ..+++|++ |.++++++|.++|+.+ +.++
T Consensus 304 l~~~ad~vv~~S---G-g~~-~EA~a~G----~PvV~~~~~~~~~e~v~~G~~~lv~~-d~~~l~~ai~~ll~d~-~~~~ 372 (396)
T 3dzc_A 304 LMDRAHIILTDS---G-GIQ-EEAPSLG----KPVLVMRETTERPEAVAAGTVKLVGT-NQQQICDALSLLLTDP-QAYQ 372 (396)
T ss_dssp HHHHCSEEEESC---S-GGG-TTGGGGT----CCEEECCSSCSCHHHHHHTSEEECTT-CHHHHHHHHHHHHHCH-HHHH
T ss_pred HHHhcCEEEECC---c-cHH-HHHHHcC----CCEEEccCCCcchHHHHcCceEEcCC-CHHHHHHHHHHHHcCH-HHHH
Confidence 999999999999 6 666 9999995 888888 5555555441 24677765 8999999999999864 3444
Q ss_pred HHHHHhh
Q 005855 534 KRHWHNF 540 (673)
Q Consensus 534 ~r~~~~~ 540 (673)
++.++..
T Consensus 373 ~m~~~~~ 379 (396)
T 3dzc_A 373 AMSQAHN 379 (396)
T ss_dssp HHHTSCC
T ss_pred HHhhccC
Confidence 4444333
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.41 E-value=9e-12 Score=136.14 Aligned_cols=260 Identities=14% Similarity=0.123 Sum_probs=158.9
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhhh--cCCEEEEeCHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAVL--AADLVGFHTYDYARHF 302 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~ll--~aDlIgF~t~~~~~~F 302 (673)
+.+..+| |+|++|+.-...++..+..+..++|++. ++.+.-+...++ |+.+++.+.+. .+|++...+..+.++|
T Consensus 109 ~l~~~kP-D~Vi~~gd~~~~l~~~laA~~~~IPv~h-~~aglrs~~~~~--~~p~~~~r~~~~~~a~~~~~~se~~~~~l 184 (403)
T 3ot5_A 109 VIAAENP-DIVLVHGDTTTSFAAGLATFYQQKMLGH-VEAGLRTWNKYS--PFPEEMNRQLTGVMADIHFSPTKQAKENL 184 (403)
T ss_dssp HHHHHCC-SEEEEETTCHHHHHHHHHHHHTTCEEEE-ESCCCCCSCTTS--STTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred HHHHcCC-CEEEEECCchhHHHHHHHHHHhCCCEEE-EECCcccccccc--CCcHHHHHHHHHHhcCEEECCCHHHHHHH
Confidence 3344454 9999998655555544444456788753 333332222222 23344444432 3788888888887777
Q ss_pred HHHHHHHhccccCCCceeeCCeeeEEEEeec-CcChhhhhhhhcCChhHHHHHHHHHHhcC-CceEEEeecccc-cCChH
Q 005855 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFAG-RKVMLGVDRLDM-IKGIP 379 (673)
Q Consensus 303 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~~-~~iIl~VgRLd~-~KGi~ 379 (673)
.+ .|.+ ..+|.++++ ++|...+........ ..++++.+ +.+++.++|... .|++.
T Consensus 185 ~~-----~Gi~-----------~~~i~vvGn~~~D~~~~~~~~~~~~------~~~~~l~~~~~vlv~~~r~~~~~~~l~ 242 (403)
T 3ot5_A 185 LA-----EGKD-----------PATIFVTGNTAIDALKTTVQKDYHH------PILENLGDNRLILMTAHRRENLGEPMQ 242 (403)
T ss_dssp HH-----TTCC-----------GGGEEECCCHHHHHHHHHSCTTCCC------HHHHSCTTCEEEEECCCCHHHHTTHHH
T ss_pred HH-----cCCC-----------cccEEEeCCchHHHHHhhhhhhcch------HHHHhccCCCEEEEEeCcccccCcHHH
Confidence 53 2322 345677765 567654432110000 11222233 345667888754 47899
Q ss_pred HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHHHH
Q 005855 380 QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALYAV 459 (673)
Q Consensus 380 ~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ 459 (673)
.+++|+..+.+++|++ .++.++.+ .+ .+++.+++..+. +..|+ +.++++..++..+|+.
T Consensus 243 ~ll~a~~~l~~~~~~~----~~v~~~~~----~~---~~~~~l~~~~~~---------~~~v~-l~~~l~~~~~~~l~~~ 301 (403)
T 3ot5_A 243 GMFEAVREIVESREDT----ELVYPMHL----NP---AVREKAMAILGG---------HERIH-LIEPLDAIDFHNFLRK 301 (403)
T ss_dssp HHHHHHHHHHHHCTTE----EEEEECCS----CH---HHHHHHHHHHTT---------CTTEE-EECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCc----eEEEecCC----CH---HHHHHHHHHhCC---------CCCEE-EeCCCCHHHHHHHHHh
Confidence 9999999999988874 35544332 12 234444443211 12455 4578888999999999
Q ss_pred cCEEEEcCCCcCCChhHHHHHhhccCCCceEEEe-CCCCchhhc-cCceEEECCCCHHHHHHHHHHHhcCCHHHHHHHHH
Q 005855 460 TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS-EFAGAAQSL-GAGAILVNPWNITEVANAIARALNMSPEEREKRHW 537 (673)
Q Consensus 460 ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlS-e~aG~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~~er~~r~~ 537 (673)
||++|.+| |-+.+||++|+ .|+|++ +.++..+.+ ..+|++|++ |.++++++|.++|+.+ +.++++.+
T Consensus 302 ad~vv~~S-----Gg~~~EA~a~g----~PvV~~~~~~~~~e~v~~g~~~lv~~-d~~~l~~ai~~ll~~~-~~~~~m~~ 370 (403)
T 3ot5_A 302 SYLVFTDS-----GGVQEEAPGMG----VPVLVLRDTTERPEGIEAGTLKLIGT-NKENLIKEALDLLDNK-ESHDKMAQ 370 (403)
T ss_dssp EEEEEECC-----HHHHHHGGGTT----CCEEECCSSCSCHHHHHHTSEEECCS-CHHHHHHHHHHHHHCH-HHHHHHHH
T ss_pred cCEEEECC-----ccHHHHHHHhC----CCEEEecCCCcchhheeCCcEEEcCC-CHHHHHHHHHHHHcCH-HHHHHHHh
Confidence 99999888 33449999995 888888 555554544 237888876 9999999999999864 34444444
Q ss_pred HhhHH
Q 005855 538 HNFTH 542 (673)
Q Consensus 538 ~~~~~ 542 (673)
....+
T Consensus 371 ~~~~~ 375 (403)
T 3ot5_A 371 AANPY 375 (403)
T ss_dssp SCCTT
T ss_pred hcCcc
Confidence 43333
No 31
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.04 E-value=1.1e-08 Score=109.24 Aligned_cols=244 Identities=12% Similarity=0.042 Sum_probs=151.6
Q ss_pred HHHHhcCCCCEEEEeCccch--hH-HHHHHhh-CCCCeEEeEeccCCCchhhhhcCCcc-hHHHHhhhcCCEEEEeCHHH
Q 005855 224 VVNKHYKDGDVVWCHDYHLM--FL-PKCLKEY-NSDMKVGWFLHTPFPSSEIHRTLPSR-SDLLRAVLAADLVGFHTYDY 298 (673)
Q Consensus 224 ~i~~~~~~~DvVwvHDyhl~--ll-p~~Lr~~-~~~~~Ig~flH~PfP~~e~fr~lp~r-~~il~~ll~aDlIgF~t~~~ 298 (673)
.+....+++|+|+++-..+. .+ ..+++.. ..++++.+..|--+|-.- ..-+.. ..-...+..||.|..+++..
T Consensus 67 ~~~~~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl~pl~~--~~~~~~~~~E~~~y~~aD~Ii~~S~~~ 144 (339)
T 3rhz_A 67 GIVAGLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDVVPLMF--SGNFYLMDRTIAYYNKADVVVAPSQKM 144 (339)
T ss_dssp HHTTTCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCCHHHHC--GGGGGGHHHHHHHHTTCSEEEESCHHH
T ss_pred HHHhcCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEecccHHhhC--ccchhhHHHHHHHHHHCCEEEECCHHH
Confidence 35556788999999876652 22 2334432 238999999997665221 000000 11123356899999999876
Q ss_pred HHHHHHHHHHHhccccCCCceeeCCeeeEEEEeecCc-ChhhhhhhhcCChhHHHHHHHHHHhcCCceEEEeecccccCC
Q 005855 299 ARHFVSACTRILGFEGTPEGVEDQGRLTRVAAFPIGI-DSERFIRALEINPVQVHIKELQETFAGRKVMLGVDRLDMIKG 377 (673)
Q Consensus 299 ~~~Fl~~~~r~l~~~~~~~~i~~~gr~~~v~viP~GI-D~~~f~~~~~~~~~~~~~~~lr~~~~~~~iIl~VgRLd~~KG 377 (673)
.+.+.+ .|.. ..++. +.++ |... + .+. ....++++|+++||+....+
T Consensus 145 ~~~l~~-----~G~~-----------~~ki~--~~~~~~~~~--~---~~~---------~~~~~~~~i~yaG~l~k~~~ 192 (339)
T 3rhz_A 145 IDKLRD-----FGMN-----------VSKTV--VQGMWDHPT--Q---APM---------FPAGLKREIHFPGNPERFSF 192 (339)
T ss_dssp HHHHHH-----TTCC-----------CSEEE--ECCSCCCCC--C---CCC---------CCCEEEEEEEECSCTTTCGG
T ss_pred HHHHHH-----cCCC-----------cCcee--ecCCCCccC--c---ccc---------cccCCCcEEEEeCCcchhhH
Confidence 655432 1321 12343 3333 2110 0 000 01134688999999985322
Q ss_pred hHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHHHH
Q 005855 378 IPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCALY 457 (673)
Q Consensus 378 i~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~aly 457 (673)
+. + + .|+ +.|+++|.+. +. + .+ .|+| .|.++.+|++.+|
T Consensus 193 L~----~---l---~~~----~~f~ivG~G~-----~~------------~-------l~--nV~f-~G~~~~~el~~~l 231 (339)
T 3rhz_A 193 VK----E---W---KYD----IPLKVYTWQN-----VE------------L-------PQ--NVHK-INYRPDEQLLMEM 231 (339)
T ss_dssp GG----G---C---CCS----SCEEEEESCC-----CC------------C-------CT--TEEE-EECCCHHHHHHHH
T ss_pred HH----h---C---CCC----CeEEEEeCCc-----cc------------C-------cC--CEEE-eCCCCHHHHHHHH
Confidence 11 1 1 344 4588898532 10 0 11 3665 6899999999999
Q ss_pred HHcCEEEEcCCCcC---------CChhHHHHHhhccCCCceEEEeCCCCchhhc--cCceEEECCCCHHHHHHHHHHHhc
Q 005855 458 AVTDVALVTSLRDG---------MNLVSYEFVACQDLKKGVLILSEFAGAAQSL--GAGAILVNPWNITEVANAIARALN 526 (673)
Q Consensus 458 ~~ADv~vv~Sl~EG---------f~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (673)
+.||+.++. .++ ++....|||||| .|+|++..++.++.+ +..|+.++ +.++++++|..+
T Consensus 232 ~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~G----~PVI~~~~~~~~~~v~~~~~G~~~~--~~~e~~~~i~~l-- 301 (339)
T 3rhz_A 232 SQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAAG----IPVIVQEGIANQELIENNGLGWIVK--DVEEAIMKVKNV-- 301 (339)
T ss_dssp HTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHHT----CCEEEETTCTTTHHHHHHTCEEEES--SHHHHHHHHHHC--
T ss_pred HhCCEEEEE--CCCchhHHHHhcChHHHHHHHHcC----CCEEEccChhHHHHHHhCCeEEEeC--CHHHHHHHHHHh--
Confidence 999999987 233 467899999995 899999999888888 46789987 578888888753
Q ss_pred CCHHHHHHHHHHhhHHHhhCCHHHHHH
Q 005855 527 MSPEEREKRHWHNFTHVTTHTAQEWAE 553 (673)
Q Consensus 527 m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (673)
.++++.++.+++++..++.+.....+
T Consensus 302 -~~~~~~~m~~na~~~a~~~~~~~f~k 327 (339)
T 3rhz_A 302 -NEDEYIELVKNVRSFNPILRKGFFTR 327 (339)
T ss_dssp -CHHHHHHHHHHHHHHTHHHHTTHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 46677777777777765544334433
No 32
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.88 E-value=5e-08 Score=105.90 Aligned_cols=245 Identities=10% Similarity=0.052 Sum_probs=142.3
Q ss_pred HHHhcCCCCEEEEeCccchhHHHHHHhhCCCCeEEeEeccCCCchhhhhcCCcchHHHHhh--hcCCEEEEeCHHHHHHH
Q 005855 225 VNKHYKDGDVVWCHDYHLMFLPKCLKEYNSDMKVGWFLHTPFPSSEIHRTLPSRSDLLRAV--LAADLVGFHTYDYARHF 302 (673)
Q Consensus 225 i~~~~~~~DvVwvHDyhl~llp~~Lr~~~~~~~Ig~flH~PfP~~e~fr~lp~r~~il~~l--l~aDlIgF~t~~~~~~F 302 (673)
+.+..+| |+|++|+.-...++ .+.....++|++. ++.+.-+.+. ++.+++.+-+ ..+|++...+....++|
T Consensus 89 ~l~~~kP-D~Vlv~gd~~~~~a-alaA~~~~IPv~h-~eaglrs~~~----~~pee~nR~~~~~~a~~~~~~te~~~~~l 161 (385)
T 4hwg_A 89 VLEKEKP-DAVLFYGDTNSCLS-AIAAKRRKIPIFH-MEAGNRCFDQ----RVPEEINRKIIDHISDVNITLTEHARRYL 161 (385)
T ss_dssp HHHHHCC-SEEEEESCSGGGGG-HHHHHHTTCCEEE-ESCCCCCSCT----TSTHHHHHHHHHHHCSEEEESSHHHHHHH
T ss_pred HHHhcCC-cEEEEECCchHHHH-HHHHHHhCCCEEE-EeCCCccccc----cCcHHHHHHHHHhhhceeecCCHHHHHHH
Confidence 3444454 99999985544445 4444445678754 3333322111 2223343333 24788877888777777
Q ss_pred HHHHHHHhccccCCCceeeCCeeeEEEEeec-CcChhhhhhhhcCChhHHHHHHHHHHhc---CCceEEEeeccc---cc
Q 005855 303 VSACTRILGFEGTPEGVEDQGRLTRVAAFPI-GIDSERFIRALEINPVQVHIKELQETFA---GRKVMLGVDRLD---MI 375 (673)
Q Consensus 303 l~~~~r~l~~~~~~~~i~~~gr~~~v~viP~-GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~~iIl~VgRLd---~~ 375 (673)
.+ .|.+ ..+|.++++ ++|.-.+.... .....++++++ ++.+++..+|.. ..
T Consensus 162 ~~-----~G~~-----------~~~I~vtGnp~~D~~~~~~~~------~~~~~~~~~lgl~~~~~iLvt~hr~e~~~~~ 219 (385)
T 4hwg_A 162 IA-----EGLP-----------AELTFKSGSHMPEVLDRFMPK------ILKSDILDKLSLTPKQYFLISSHREENVDVK 219 (385)
T ss_dssp HH-----TTCC-----------GGGEEECCCSHHHHHHHHHHH------HHHCCHHHHTTCCTTSEEEEEECCC-----C
T ss_pred HH-----cCCC-----------cCcEEEECCchHHHHHHhhhh------cchhHHHHHcCCCcCCEEEEEeCCchhcCcH
Confidence 53 2322 235566654 56643332100 01123445553 344556778854 44
Q ss_pred CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEEeCCCCCHHHHHH
Q 005855 376 KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFPALCA 455 (673)
Q Consensus 376 KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~~~~~v~~~el~a 455 (673)
|++..+++|+..+.+++ ++ .+|... .|. +++.++++. +- .+ ....|+ +.+.++..++..
T Consensus 220 ~~l~~ll~al~~l~~~~-~~----~vv~p~------~p~---~~~~l~~~~---~~-~~--~~~~v~-l~~~lg~~~~~~ 278 (385)
T 4hwg_A 220 NNLKELLNSLQMLIKEY-NF----LIIFST------HPR---TKKRLEDLE---GF-KE--LGDKIR-FLPAFSFTDYVK 278 (385)
T ss_dssp HHHHHHHHHHHHHHHHH-CC----EEEEEE------CHH---HHHHHHTSG---GG-GG--TGGGEE-ECCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC-Ce----EEEEEC------ChH---HHHHHHHHH---HH-hc--CCCCEE-EEcCCCHHHHHH
Confidence 78999999999987765 43 243322 132 233333220 10 00 112455 567888889999
Q ss_pred HHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC-chhhc-cCceEEECCCCHHHHHHHHHHHhcCCH
Q 005855 456 LYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-AAQSL-GAGAILVNPWNITEVANAIARALNMSP 529 (673)
Q Consensus 456 ly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG-~~~~l-g~~gllVnP~D~~~lA~aI~~aL~m~~ 529 (673)
+|+.||+++..| |.+..||++++ .|+|+..... ..+.+ ..++++|++ |.+++++++.++|+.+.
T Consensus 279 l~~~adlvvt~S-----Ggv~~EA~alG----~Pvv~~~~~ter~e~v~~G~~~lv~~-d~~~i~~ai~~ll~d~~ 344 (385)
T 4hwg_A 279 LQMNAFCILSDS-----GTITEEASILN----LPALNIREAHERPEGMDAGTLIMSGF-KAERVLQAVKTITEEHD 344 (385)
T ss_dssp HHHHCSEEEECC-----TTHHHHHHHTT----CCEEECSSSCSCTHHHHHTCCEECCS-SHHHHHHHHHHHHTTCB
T ss_pred HHHhCcEEEECC-----ccHHHHHHHcC----CCEEEcCCCccchhhhhcCceEEcCC-CHHHHHHHHHHHHhChH
Confidence 999999999887 45679999995 7777765433 33444 235677754 99999999999998653
No 33
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=98.64 E-value=5.9e-06 Score=96.19 Aligned_cols=151 Identities=11% Similarity=0.080 Sum_probs=106.4
Q ss_pred CCceEEEeecccccCChHHH-HHHHHHHH--HhCcCccC-ceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC
Q 005855 362 GRKVMLGVDRLDMIKGIPQK-LLAFEKFL--EENSDWRG-KVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~-L~Af~~ll--~~~P~~~~-~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~ 437 (673)
+..+++.|.|+...||.... +..+++++ ..+|+..- .+++|..|....++ ...+.+-+.+.+++..+|..=...+
T Consensus 549 d~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~Dp~v~~ 627 (824)
T 2gj4_A 549 NSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNHDPVVGD 627 (824)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTTCTTTGG
T ss_pred CcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhccCcccCC
Confidence 56889999999999999998 88888885 35664321 36777666544333 3334566678888888864211112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHcCEEEEcCC--CcCCChhHHHHHhhccCCCceEEEeCCCCchhh----cc-CceEEEC
Q 005855 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS----LG-AGAILVN 510 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~----lg-~~gllVn 510 (673)
...|+|+. ..+..--..+|.+|||++.||. .|.-|+.-+=||.- |.|-+|..-|+..+ +| .+|+++.
T Consensus 628 ~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN-----GaLtigtlDGanvEi~e~vG~~Ngf~FG 701 (824)
T 2gj4_A 628 RLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN-----GALTIGTMDGANVEMAEEAGEENFFIFG 701 (824)
T ss_dssp GEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CceEEEEecCccchhhhccCCCCEEEeC
Confidence 22477665 4466666788999999999999 99999999999986 66666776676533 34 5799998
Q ss_pred CCCHHHHHHHH
Q 005855 511 PWNITEVANAI 521 (673)
Q Consensus 511 P~D~~~lA~aI 521 (673)
.. .+++ .++
T Consensus 702 ~~-~~ev-~~l 710 (824)
T 2gj4_A 702 MR-VEDV-DRL 710 (824)
T ss_dssp CC-HHHH-HHH
T ss_pred Cc-HHHH-HHH
Confidence 76 6666 444
No 34
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.62 E-value=3e-07 Score=106.62 Aligned_cols=150 Identities=15% Similarity=0.122 Sum_probs=107.6
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHHH--hCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC
Q 005855 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~-~L~Af~~ll~--~~P~~~-~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~ 437 (673)
+..+++.|.|+...||... ++..++++++ .+|+.. ..+++|..|....++ ...+.+-+.+.+++.-||..=...+
T Consensus 525 d~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~Dp~~~~ 603 (796)
T 1l5w_A 525 QAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINNDPLVGD 603 (796)
T ss_dssp TSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTGG
T ss_pred CcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5688999999999999999 8999888865 355411 247787666544333 2334556667788777774211112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHcCEEEEcCC--CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc----c-CceEEEC
Q 005855 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l----g-~~gllVn 510 (673)
...|+|+. ..+..--..+|.+||+++.||. .|.-|+.-+=||.- |.|-+|...|+..++ | .+|+++.
T Consensus 604 ~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 677 (796)
T 1l5w_A 604 KLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN-----GALTVGTLDGANVEIAEKVGEENIFIFG 677 (796)
T ss_dssp GEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT-----TCEEEECSCTTHHHHHHHHCGGGSEECS
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeeecCcCCeeeehhhccCCCcEEEec
Confidence 22477654 4566666788999999999999 99999999999986 566668887777655 5 5899998
Q ss_pred CCCHHHHHH
Q 005855 511 PWNITEVAN 519 (673)
Q Consensus 511 P~D~~~lA~ 519 (673)
. +.+++.+
T Consensus 678 ~-~~~ev~~ 685 (796)
T 1l5w_A 678 H-TVEQVKA 685 (796)
T ss_dssp C-CHHHHHH
T ss_pred C-CHHHHHH
Confidence 7 7777663
No 35
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=98.60 E-value=5e-07 Score=97.18 Aligned_cols=158 Identities=15% Similarity=0.047 Sum_probs=103.1
Q ss_pred CCceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 362 GRKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
+..+++++|++. .|+...+..+++.+.+ .+ +.+++++++.. ... .+ ++ + . ..|
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~-~~-----~~~~~~~g~~~-~~~---~l----~~----~------~--~~v 294 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAG-LD-----ADVLVASGPSL-DVS---GL----GE----V------P--ANV 294 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHT-SS-----SEEEEECCSSC-CCT---TC----CC----C------C--TTE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHc-CC-----CEEEEEECCCC-Chh---hh----cc----C------C--CcE
Confidence 345678899996 6777666666666533 22 23444443221 000 11 00 0 0 135
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC--C
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW--N 513 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~--D 513 (673)
.+ .+.++ +..+|+.||++|.+|- ..+++|||+|+ .|+|+....+ .++.+ +..|+++++. |
T Consensus 295 ~~-~~~~~---~~~~l~~ad~~v~~~g----~~t~~Ea~a~G----~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~ 362 (412)
T 3otg_A 295 RL-ESWVP---QAALLPHVDLVVHHGG----SGTTLGALGAG----VPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNIS 362 (412)
T ss_dssp EE-ESCCC---HHHHGGGCSEEEESCC----HHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCC
T ss_pred EE-eCCCC---HHHHHhcCcEEEECCc----hHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCcccCC
Confidence 54 56664 7789999999997762 36899999995 8888865543 45555 3579999987 9
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHH
Q 005855 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 514 ~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 559 (673)
+++++++|.++|+++ +.++.+.+..++....++...-++.+.+.+
T Consensus 363 ~~~l~~ai~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 363 PDSVSGAAKRLLAEE-SYRAGARAVAAEIAAMPGPDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHSCCHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHhCH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHh
Confidence 999999999999864 455666666677777777777666555443
No 36
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=98.59 E-value=4.7e-06 Score=96.65 Aligned_cols=151 Identities=13% Similarity=0.165 Sum_probs=107.6
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHHH--hCcCcc-CceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC
Q 005855 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--ENSDWR-GKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~-~L~Af~~ll~--~~P~~~-~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~ 437 (673)
+..+++.|.|+...||... ++..++++++ ++|+.. ..+++|..|....++ ...+.+-+.+.+++.-||..=...+
T Consensus 515 d~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~dp~~~~ 593 (796)
T 2c4m_A 515 ESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNNDPEVSP 593 (796)
T ss_dssp TSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTCTTTTT
T ss_pred CCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccccccCC
Confidence 5788999999999999999 8999998875 566421 247787666544333 2334556667788777775211112
Q ss_pred cccEEEeCCCCCHHHHHHHHHHcCEEEEcCC--CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc----c-CceEEEC
Q 005855 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSL--RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----G-AGAILVN 510 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl--~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l----g-~~gllVn 510 (673)
...|+|+. ..+..--..+|.+||+++.||. .|.-|+.-+=||.- |.|-+|...|+..++ | .+|+++.
T Consensus 594 ~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N-----GaL~iGtLDGanvEi~e~vG~~NgF~FG 667 (796)
T 2c4m_A 594 LLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN-----GALTLGTMDGANVEIVDSVGEENAYIFG 667 (796)
T ss_dssp TEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT-----TCEEEEESSTHHHHHHHHHCGGGSEEES
T ss_pred ceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc-----CCeEEeccCCeEeehhhhcCCCcEEEec
Confidence 22477665 4466666788999999999999 99999999999986 556667777777554 5 5899997
Q ss_pred C--CCHHHHHH
Q 005855 511 P--WNITEVAN 519 (673)
Q Consensus 511 P--~D~~~lA~ 519 (673)
. .++.++-.
T Consensus 668 ~~~~ev~~l~~ 678 (796)
T 2c4m_A 668 ARVEELPALRE 678 (796)
T ss_dssp CCTTTHHHHHH
T ss_pred CchhhHHHHHH
Confidence 6 56655543
No 37
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=98.44 E-value=1.5e-06 Score=92.94 Aligned_cols=155 Identities=11% Similarity=0.031 Sum_probs=101.6
Q ss_pred CceEEEeecccccCCh-HHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 363 RKVMLGVDRLDMIKGI-PQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 363 ~~iIl~VgRLd~~KGi-~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
+.+++++|++...|+. ..+++++... ++.|++ .+++++++ ++...+ . .+ . ..|
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~----~~v~~~~~-----~~~~~l----~----~~------~--~~v 272 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAA-TELPGV----EAVIAVPP-----EHRALL----T----DL------P--DNA 272 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTE----EEEEECCG-----GGGGGC----T----TC------C--TTE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCe----EEEEEECC-----cchhhc----c----cC------C--CCE
Confidence 4567788999886655 8888888877 777754 36655432 111111 1 00 0 134
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCC----CCchhhc--cCceEEECC----
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNP---- 511 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~----aG~~~~l--g~~gllVnP---- 511 (673)
+ +.+.++..+ ++..||++|. .|-..+.+|||+|| .|+|+.-. .+.++.+ +..|+++++
T Consensus 273 ~-~~~~~~~~~---ll~~ad~~v~----~~G~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~ 340 (391)
T 3tsa_A 273 R-IAESVPLNL---FLRTCELVIC----AGGSGTAFTATRLG----IPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQ 340 (391)
T ss_dssp E-ECCSCCGGG---TGGGCSEEEE----CCCHHHHHHHHHTT----CCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHH
T ss_pred E-EeccCCHHH---HHhhCCEEEe----CCCHHHHHHHHHhC----CCEEecCCcccHHHHHHHHHHcCCEEecCccccc
Confidence 4 467777654 4599999995 44457889999995 78887433 3344444 357899998
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHH
Q 005855 512 WNITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (673)
Q Consensus 512 ~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (673)
.|.++++++|.++|+++. .++.+.+..++..........++.+.
T Consensus 341 ~~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 384 (391)
T 3tsa_A 341 SDHEQFTDSIATVLGDTG-FAAAAIKLSDEITAMPHPAALVRTLE 384 (391)
T ss_dssp TCHHHHHHHHHHHHTCTH-HHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 899999999999999764 44444455555566666666555443
No 38
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=98.42 E-value=3.6e-06 Score=90.37 Aligned_cols=100 Identities=16% Similarity=0.061 Sum_probs=66.1
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEe----CCCCchhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILS----EFAGAAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlS----e~aG~~~~l--g~~gllVnP~-- 512 (673)
|. +.+.++ ...++..||++|. .|-+.+..|||+|| .|+|+. +..+.++.+ ...|+++++.
T Consensus 286 v~-~~~~~~---~~~ll~~ad~~v~----~gG~~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 353 (398)
T 4fzr_A 286 VL-AAGQFP---LSAIMPACDVVVH----HGGHGTTLTCLSEG----VPQVSVPVIAEVWDSARLLHAAGAGVEVPWEQA 353 (398)
T ss_dssp EE-EESCCC---HHHHGGGCSEEEE----CCCHHHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHTTSEEECC----
T ss_pred EE-EeCcCC---HHHHHhhCCEEEe----cCCHHHHHHHHHhC----CCEEecCCchhHHHHHHHHHHcCCEEecCcccC
Confidence 55 356776 4567888999994 45577899999995 788884 333555555 3568999887
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHH
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (673)
|.++++++|.++|+.+. .+..+.+..++..........++
T Consensus 354 ~~~~l~~ai~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 393 (398)
T 4fzr_A 354 GVESVLAACARIRDDSS-YVGNARRLAAEMATLPTPADIVR 393 (398)
T ss_dssp ---CHHHHHHHHHHCTH-HHHHHHHHHHHHTTSCCHHHHHH
T ss_pred CHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 78999999999999764 44444455555556666555444
No 39
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.26 E-value=1.2e-05 Score=91.52 Aligned_cols=171 Identities=9% Similarity=-0.050 Sum_probs=107.7
Q ss_pred CceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEE-EEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccE
Q 005855 363 RKVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQ-IAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPI 441 (673)
Q Consensus 363 ~~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvq-vg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV 441 (673)
..++.+..|+ .|..+..++++.+++++.|+. +.++. +|. . .+.+. .+.+++.+. .|. ..+
T Consensus 441 ~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s---~L~l~~~g~-~--~g~~~-~~~~~~~~~--GI~--------~Rv 501 (631)
T 3q3e_A 441 VVNIGIASTT--MKLNPYFLEALKAIRDRAKVK---VHFHFALGQ-S--NGITH-PYVERFIKS--YLG--------DSA 501 (631)
T ss_dssp EEEEEEEECS--TTCCHHHHHHHHHHHHHCSSE---EEEEEEESS-C--CGGGH-HHHHHHHHH--HHG--------GGE
T ss_pred eEEEEECCcc--ccCCHHHHHHHHHHHHhCCCc---EEEEEecCC-C--chhhH-HHHHHHHHc--CCC--------ccE
Confidence 4456667775 699999999999999999963 22222 331 1 22222 222232221 222 135
Q ss_pred EEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc--------cCceEEECCCC
Q 005855 442 HHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--------GAGAILVNPWN 513 (673)
Q Consensus 442 ~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--------g~~gllVnP~D 513 (673)
. |.+.++.++..++|+.|||||.|+.+.| |++++|||+|| .|+|.....+.+.-+ |-..++| ..|
T Consensus 502 ~-F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmG----VPVVTl~G~~~asRvgaSlL~~~GLpE~LI-A~d 574 (631)
T 3q3e_A 502 T-AHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLG----LVGVCKTGAEVHEHIDEGLFKRLGLPEWLI-ANT 574 (631)
T ss_dssp E-EECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTT----CCEEEECCSSHHHHHHHHHHHHTTCCGGGE-ESS
T ss_pred E-EcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcC----CCEEeccCCcHHHHhHHHHHHhcCCCccee-cCC
Confidence 5 4688999999999999999999998877 99999999994 666664444333222 3333223 247
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhh---CCHHHHHHHHHHHHHHh
Q 005855 514 ITEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDT 562 (673)
Q Consensus 514 ~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~L~~~ 562 (673)
.++.+++..++.++++ .+....+++++...+ ++ .|.+.|-+.++.+
T Consensus 575 ~eeYv~~Av~La~D~~-~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~ 623 (631)
T 3q3e_A 575 VDEYVERAVRLAENHQ-ERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEK 623 (631)
T ss_dssp HHHHHHHHHHHHHCHH-HHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHH-HHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHH
Confidence 9999999999988754 555555555554322 22 3445554444443
No 40
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=98.09 E-value=9.9e-05 Score=78.99 Aligned_cols=149 Identities=13% Similarity=0.038 Sum_probs=87.4
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEE
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (673)
.+++..|++...+.-..+++|++.+... .++.++.+++. ..++.+.+... ..+. ++.+
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~-----~~~~vi~~~G~-----~~~~~~~~~~~----~~~~--------~~~v 239 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLE-----IRPAIRHQAGR-----QHAEITAERYR----TVAV--------EADV 239 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTT-----TCCEEEEECCT-----TTHHHHHHHHH----HTTC--------CCEE
T ss_pred EEEEECCcCCccccchhhHHHHHhcccc-----cceEEEEecCc-----cccccccceec----cccc--------cccc
Confidence 3455557887766666666776655322 12334444322 12333333332 2221 1232
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCch--------hhc--cCceEEECCC-
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA--------QSL--GAGAILVNPW- 512 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~--------~~l--g~~gllVnP~- 512 (673)
.+++ +++..+|+.||++|..+ | +.++.|+|+++ .|.|+..+.++. +.+ ...|++++..
T Consensus 240 -~~f~--~dm~~~l~~aDlvI~ra---G-~~Tv~E~~a~G----~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~ 308 (365)
T 3s2u_A 240 -APFI--SDMAAAYAWADLVICRA---G-ALTVSELTAAG----LPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKS 308 (365)
T ss_dssp -ESCC--SCHHHHHHHCSEEEECC---C-HHHHHHHHHHT----CCEEECC-----CCHHHHHHHHHHTTTSEEECCTTT
T ss_pred -ccch--hhhhhhhccceEEEecC---C-cchHHHHHHhC----CCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCC
Confidence 2343 46889999999999654 4 67889999995 788877665432 223 1347788755
Q ss_pred -CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhC
Q 005855 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTH 546 (673)
Q Consensus 513 -D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~ 546 (673)
++++++++|.++|++++ .++++.+++++....+
T Consensus 309 ~~~~~L~~~i~~ll~d~~-~~~~m~~~a~~~~~~~ 342 (365)
T 3s2u_A 309 TGAAELAAQLSEVLMHPE-TLRSMADQARSLAKPE 342 (365)
T ss_dssp CCHHHHHHHHHHHHHCTH-HHHHHHHHHHHTCCTT
T ss_pred CCHHHHHHHHHHHHCCHH-HHHHHHHHHHhcCCcc
Confidence 58999999999999874 5555556665554443
No 41
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=97.95 E-value=3.4e-05 Score=83.57 Aligned_cols=102 Identities=13% Similarity=-0.026 Sum_probs=70.9
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (673)
|.+ .+.+++. .+|+.||++|..+ |. .+.+|||+|| .|+|+....| .++.+ ...|+++++.
T Consensus 285 v~~-~~~~~~~---~~l~~ad~~v~~~---G~-~t~~Ea~~~G----~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~ 352 (430)
T 2iyf_A 285 VEV-HDWVPQL---AILRQADLFVTHA---GA-GGSQEGLATA----TPMIAVPQAVDQFGNADMLQGLGVARKLATEEA 352 (430)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEECC---CH-HHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCCC-C
T ss_pred eEE-EecCCHH---HHhhccCEEEECC---Cc-cHHHHHHHhC----CCEEECCCccchHHHHHHHHHcCCEEEcCCCCC
Confidence 554 5777765 6899999998865 33 6899999995 8888887654 23333 3468999887
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHH
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETF 555 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~f 555 (673)
|.++++++|.++|+.+ +.++++.+..++....++....++.+
T Consensus 353 ~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 394 (430)
T 2iyf_A 353 TADLLRETALALVDDP-EVARRLRRIQAEMAQEGGTRRAADLI 394 (430)
T ss_dssp CHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 8999999999999854 34444444445555555545544444
No 42
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=97.95 E-value=1e-05 Score=81.45 Aligned_cols=58 Identities=19% Similarity=0.283 Sum_probs=49.7
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
++|++|+||||.+...+| ....++++++++|++|.+.. .|+|+|||+...+..++..+
T Consensus 2 kli~~DlDGTLl~~~~~~---------~~~~i~~~~~~al~~l~~~g--~v~iaTGR~~~~~~~~~~~l 59 (239)
T 1u02_A 2 SLIFLDYDGTLVPIIMNP---------EESYADAGLLSLISDLKERF--DTYIVTGRSPEEISRFLPLD 59 (239)
T ss_dssp CEEEEECBTTTBCCCSCG---------GGCCCCHHHHHHHHHHHHHS--EEEEECSSCHHHHHHHSCSS
T ss_pred eEEEEecCCCCcCCCCCc---------ccCCCCHHHHHHHHHHhcCC--CEEEEeCCCHHHHHHHhccc
Confidence 689999999999865433 34567899999999999875 99999999999999998775
No 43
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=97.80 E-value=7.6e-05 Score=70.37 Aligned_cols=124 Identities=15% Similarity=0.105 Sum_probs=83.4
Q ss_pred CCceEEEeeccc---ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCc
Q 005855 362 GRKVMLGVDRLD---MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (673)
Q Consensus 362 ~~~iIl~VgRLd---~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~ 438 (673)
...+++++|++. +.|++..+++|+..+ + ..++.++++.. .+ .+ .
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~----~-----~~~~~~~g~~~---~~-------------~~----~---- 67 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQI----P-----QKVLWRFDGNK---PD-------------TL----G---- 67 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTS----S-----SEEEEECCSSC---CT-------------TC----C----
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhC----C-----CeEEEEECCcC---cc-------------cC----C----
Confidence 356888999995 677888888887542 2 23444443221 00 01 0
Q ss_pred ccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC
Q 005855 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW 512 (673)
Q Consensus 439 ~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~ 512 (673)
..|+ +.+.+++.++.++ ..||++|.. |-+.++.|+|+|+ .|+|+....+ .++.+ ...|+.+++.
T Consensus 68 ~~v~-~~~~~~~~~~l~~-~~ad~~I~~----~G~~t~~Ea~~~G----~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~ 137 (170)
T 2o6l_A 68 LNTR-LYKWIPQNDLLGH-PKTRAFITH----GGANGIYEAIYHG----IPMVGIPLFADQPDNIAHMKARGAAVRVDFN 137 (170)
T ss_dssp TTEE-EESSCCHHHHHTS-TTEEEEEEC----CCHHHHHHHHHHT----CCEEECCCSTTHHHHHHHHHTTTSEEECCTT
T ss_pred CcEE-EecCCCHHHHhcC-CCcCEEEEc----CCccHHHHHHHcC----CCEEeccchhhHHHHHHHHHHcCCeEEeccc
Confidence 1355 4578888766553 999999974 3358999999995 8888887642 23333 2468888876
Q ss_pred --CHHHHHHHHHHHhcCC
Q 005855 513 --NITEVANAIARALNMS 528 (673)
Q Consensus 513 --D~~~lA~aI~~aL~m~ 528 (673)
+.++++++|.++|+.+
T Consensus 138 ~~~~~~l~~~i~~ll~~~ 155 (170)
T 2o6l_A 138 TMSSTDLLNALKRVINDP 155 (170)
T ss_dssp TCCHHHHHHHHHHHHHCH
T ss_pred cCCHHHHHHHHHHHHcCH
Confidence 8899999999999754
No 44
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=97.73 E-value=3.7e-05 Score=78.22 Aligned_cols=60 Identities=25% Similarity=0.304 Sum_probs=45.3
Q ss_pred HHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 584 ~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+|+..+.+||++|+||||.+. ....+++.+++|++|.+ . ..|+|.|||+...+.+.++.
T Consensus 6 ~~~~~~~~kli~~DlDGTLl~~--------------~~~is~~~~~al~~l~~-~-i~v~iaTGR~~~~~~~~l~~ 65 (262)
T 2fue_A 6 QAARRKERVLCLFDVDGTLTPA--------------RQKIDPEVAAFLQKLRS-R-VQIGVVGGSDYCKIAEQLGD 65 (262)
T ss_dssp -------CEEEEEESBTTTBST--------------TSCCCHHHHHHHHHHTT-T-SEEEEECSSCHHHHHHHHSS
T ss_pred ccccccCeEEEEEeCccCCCCC--------------CCcCCHHHHHHHHHHHh-C-CEEEEEcCCCHHHHHHHHhh
Confidence 4567777899999999999974 22357899999999965 4 89999999999988888864
No 45
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=97.68 E-value=0.00055 Score=72.76 Aligned_cols=137 Identities=10% Similarity=0.048 Sum_probs=86.7
Q ss_pred CceEEEeeccccc-------CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCC
Q 005855 363 RKVMLGVDRLDMI-------KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGT 435 (673)
Q Consensus 363 ~~iIl~VgRLd~~-------KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~ 435 (673)
..+++++|++... +.+..+++|++++ + +.++++++ .++. ++++.+ .
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~----~~~~~~~g-----~~~~----~~l~~~----~----- 263 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----D----VELIVAAP-----DTVA----EALRAE----V----- 263 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----T----CEEEEECC-----HHHH----HHHHHH----C-----
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC-----C----cEEEEEeC-----CCCH----HhhCCC----C-----
Confidence 4578899999875 5677778887642 2 33554432 1222 122221 1
Q ss_pred CCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEE
Q 005855 436 LTAVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILV 509 (673)
Q Consensus 436 ~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllV 509 (673)
..|. + +.++.. .+|..||+||..+ | ..+..|||+|| .|+|+....+ .++.+ ...|+++
T Consensus 264 ---~~v~-~-~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G----~P~v~~p~~~dq~~~a~~~~~~g~g~~~ 327 (384)
T 2p6p_A 264 ---PQAR-V-GWTPLD---VVAPTCDLLVHHA---G-GVSTLTGLSAG----VPQLLIPKGSVLEAPARRVADYGAAIAL 327 (384)
T ss_dssp ---TTSE-E-ECCCHH---HHGGGCSEEEECS---C-TTHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEEC
T ss_pred ---CceE-E-cCCCHH---HHHhhCCEEEeCC---c-HHHHHHHHHhC----CCEEEccCcccchHHHHHHHHCCCeEec
Confidence 0244 4 677654 5679999999863 3 46899999995 8888887643 33333 2468888
Q ss_pred CCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHh
Q 005855 510 NPW--NITEVANAIARALNMSPEEREKRHWHNFTHVT 544 (673)
Q Consensus 510 nP~--D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~ 544 (673)
++. +.++++++|.++|+.+ +.++++.+..+.+.
T Consensus 328 ~~~~~~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~ 362 (384)
T 2p6p_A 328 LPGEDSTEAIADSCQELQAKD--TYARRAQDLSREIS 362 (384)
T ss_dssp CTTCCCHHHHHHHHHHHHHCH--HHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHHcCH--HHHHHHHHHHHHHH
Confidence 875 7999999999999864 33344444444443
No 46
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=97.57 E-value=9.4e-05 Score=74.25 Aligned_cols=54 Identities=26% Similarity=0.388 Sum_probs=45.6
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
.+.++|++|+||||... ....+++.+++|++|.+. ..|+|+|||+...+.+.++
T Consensus 4 ~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~~--i~v~iaTGR~~~~~~~~l~ 57 (246)
T 2amy_A 4 PGPALCLFDVDGTLTAP--------------RQKITKEMDDFLQKLRQK--IKIGVVGGSDFEKVQEQLG 57 (246)
T ss_dssp CCSEEEEEESBTTTBCT--------------TSCCCHHHHHHHHHHTTT--SEEEEECSSCHHHHHHHHC
T ss_pred CCceEEEEECCCCcCCC--------------CcccCHHHHHHHHHHHhC--CeEEEEcCCCHHHHHHHhc
Confidence 45789999999999974 223578999999999764 8999999999998888887
No 47
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=97.46 E-value=0.00011 Score=75.43 Aligned_cols=62 Identities=19% Similarity=0.288 Sum_probs=46.2
Q ss_pred HHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 584 ~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+|...+.++++||+||||... ....++++.++|++|.+. ...|+|+|||+...++..+..+
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~~l 75 (285)
T 3pgv_A 14 NLYFQGMYQVVASDLDGTLLSP--------------DHFLTPYAKETLKLLTAR-GINFVFATGRHYIDVGQIRDNL 75 (285)
T ss_dssp -------CCEEEEECCCCCSCT--------------TSCCCHHHHHHHHHHHTT-TCEEEEECSSCGGGGHHHHHHH
T ss_pred cccccCcceEEEEeCcCCCCCC--------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHhc
Confidence 4688899999999999999974 234678999999999764 7899999999998888777543
No 48
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=97.41 E-value=0.00021 Score=72.27 Aligned_cols=54 Identities=20% Similarity=0.211 Sum_probs=46.4
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+++++|+||||.+.. ...+++++++|++|.+. ...|+|+|||+...+.+.|+.
T Consensus 4 ~kli~~DlDGTLl~~~--------------~~i~~~~~~~l~~l~~~-g~~~~iaTGR~~~~~~~~l~~ 57 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPR--------------LCQTDEMRALIKRARGA-GFCVGTVGGSDFAKQVEQLGR 57 (246)
T ss_dssp SEEEEECSBTTTBSTT--------------SCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHCT
T ss_pred ceEEEEeCcCCcCCCC--------------CccCHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHhhh
Confidence 5899999999999742 34678999999999985 589999999999999999884
No 49
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=97.30 E-value=0.00033 Score=71.82 Aligned_cols=64 Identities=19% Similarity=0.259 Sum_probs=49.7
Q ss_pred HHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 584 ERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 584 ~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..|...+-++|++|+||||.... ....++++.++|++|.+. ...|+++|||+...++..+..+.
T Consensus 14 ~~~~~~~~kli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~~-G~~v~iaTGR~~~~~~~~~~~l~ 77 (283)
T 3dao_A 14 NLYFQGMIKLIATDIDGTLVKDG-------------SLLIDPEYMSVIDRLIDK-GIIFVVCSGRQFSSEFKLFAPIK 77 (283)
T ss_dssp -----CCCCEEEECCBTTTBSTT-------------CSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHTGGGG
T ss_pred hhhhccCceEEEEeCcCCCCCCC-------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcC
Confidence 45778888999999999999642 114678999999999875 68999999999999998887654
No 50
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=97.22 E-value=0.0027 Score=69.04 Aligned_cols=150 Identities=11% Similarity=0.000 Sum_probs=87.6
Q ss_pred CceEEEeeccccc-----CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCC
Q 005855 363 RKVMLGVDRLDMI-----KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLT 437 (673)
Q Consensus 363 ~~iIl~VgRLd~~-----KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~ 437 (673)
..++++.|++... |.+..+++|+..+ + +.+++++++. +...+ . . . .
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~----~~~v~~~g~~-----~~~~l----~----~----~--~- 318 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV-----D----AEIIATFDAQ-----QLEGV----A----N----I--P- 318 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS-----S----SEEEECCCTT-----TTSSC----S----S----C--C-
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC-----C----CEEEEEECCc-----chhhh----c----c----C--C-
Confidence 3577899999764 8888889988643 2 2344443211 11000 0 0 0 0
Q ss_pred cccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECC
Q 005855 438 AVPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP 511 (673)
Q Consensus 438 ~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP 511 (673)
..|. +.+.+++. .+|..||++|.. -| ..+..|+|+++ .|+|+..+.+ .++.+ ...|+.+++
T Consensus 319 -~~v~-~~~~~~~~---~ll~~ad~~V~~---~G-~~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~ 385 (441)
T 2yjn_A 319 -DNVR-TVGFVPMH---ALLPTCAATVHH---GG-PGSWHTAAIHG----VPQVILPDGWDTGVRAQRTQEFGAGIALPV 385 (441)
T ss_dssp -SSEE-ECCSCCHH---HHGGGCSEEEEC---CC-HHHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHHTSEEECCT
T ss_pred -CCEE-EecCCCHH---HHHhhCCEEEEC---CC-HHHHHHHHHhC----CCEEEeCCcccHHHHHHHHHHcCCEEEccc
Confidence 1344 46788864 457999999973 33 56899999995 8888887743 23333 246888887
Q ss_pred C--CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHH
Q 005855 512 W--NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETF 555 (673)
Q Consensus 512 ~--D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~f 555 (673)
. +.++++++|.++|+.+ +.++.+.+...+.........-++.+
T Consensus 386 ~~~~~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 430 (441)
T 2yjn_A 386 PELTPDQLRESVKRVLDDP-AHRAGAARMRDDMLAEPSPAEVVGIC 430 (441)
T ss_dssp TTCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5 8999999999999864 23333333333334444444444433
No 51
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=97.20 E-value=0.0016 Score=69.03 Aligned_cols=106 Identities=16% Similarity=0.120 Sum_probs=68.8
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCC-C----Cchhhc--cCceEEECCC-
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF-A----GAAQSL--GAGAILVNPW- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~-a----G~~~~l--g~~gllVnP~- 512 (673)
++ +.+.++.. .++..||++|..+- ..+.+|+|++| .|+|+.-. . +.++.+ ...|+.+++.
T Consensus 283 v~-~~~~~~~~---~ll~~ad~~v~~~G----~~t~~Ea~~~G----~P~v~~p~~~~~q~~~a~~~~~~g~g~~~~~~~ 350 (402)
T 3ia7_A 283 VE-AHQWIPFH---SVLAHARACLTHGT----TGAVLEAFAAG----VPLVLVPHFATEAAPSAERVIELGLGSVLRPDQ 350 (402)
T ss_dssp EE-EESCCCHH---HHHTTEEEEEECCC----HHHHHHHHHTT----CCEEECGGGCGGGHHHHHHHHHTTSEEECCGGG
T ss_pred EE-EecCCCHH---HHHhhCCEEEECCC----HHHHHHHHHhC----CCEEEeCCCcccHHHHHHHHHHcCCEEEccCCC
Confidence 44 35677765 88999999997763 25779999995 77775543 2 334444 3468888876
Q ss_pred -CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHH
Q 005855 513 -NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 513 -D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 559 (673)
|.++++++|.++|+++. .+....+...+.........-++.+.+.+
T Consensus 351 ~~~~~l~~~~~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 351 LEPASIREAVERLAADSA-VRERVRRMQRDILSSGGPARAADEVEAYL 397 (402)
T ss_dssp CSHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCHH-HHHHHHHHHHHHhhCChHHHHHHHHHHHH
Confidence 89999999999998642 33333333333344445555555444443
No 52
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=97.17 E-value=0.00035 Score=71.71 Aligned_cols=56 Identities=18% Similarity=0.311 Sum_probs=45.6
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++|++|+||||.+. ...++++.+++|++|.+. ...|+++|||+...+...+..+.
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~aL~~l~~~-Gi~vviaTGR~~~~~~~~~~~l~ 60 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLP--------------DHTISPAVKNAIAAARAR-GVNVVLTTGRPYAGVHNYLKELH 60 (282)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGTHHHHHHTT
T ss_pred ceEEEEeCCCCCCCC--------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHhC
Confidence 379999999999974 234678999999999865 67899999999998887776543
No 53
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=97.13 E-value=0.00045 Score=70.25 Aligned_cols=53 Identities=17% Similarity=0.207 Sum_probs=43.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
++|++|+||||... ....+++.+++|++ .+....|+|+|||+...+...+..+
T Consensus 3 kli~~DlDGTLl~~--------------~~~i~~~~~~al~~--~~~Gi~v~iaTGR~~~~~~~~~~~l 55 (268)
T 1nf2_A 3 RVFVFDLDGTLLND--------------NLEISEKDRRNIEK--LSRKCYVVFASGRMLVSTLNVEKKY 55 (268)
T ss_dssp CEEEEECCCCCSCT--------------TSCCCHHHHHHHHH--HTTTSEEEEECSSCHHHHHHHHHHH
T ss_pred cEEEEeCCCcCCCC--------------CCccCHHHHHHHHH--HhCCCEEEEECCCChHHHHHHHHHh
Confidence 68999999999974 22457889999999 4557899999999999888877654
No 54
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=97.08 E-value=0.00049 Score=70.45 Aligned_cols=56 Identities=11% Similarity=0.051 Sum_probs=44.1
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
+.++|++|+||||.... ...+++.+++|++|.+. ...|+|+|||+...+...+..+
T Consensus 8 ~~~li~~DlDGTLl~~~--------------~~~~~~~~~~l~~l~~~-G~~~~iaTGR~~~~~~~~~~~l 63 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDSH--------------SYDWQPAAPWLTRLREA-NVPVILCSSKTSAEMLYLQKTL 63 (275)
T ss_dssp CCEEEEEECTTTTSCSS--------------CCSCCTTHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHT
T ss_pred CceEEEEeCCCCCCCCC--------------CcCCHHHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHc
Confidence 35899999999999742 12335678999999764 6789999999999988887654
No 55
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=97.05 E-value=0.00042 Score=69.05 Aligned_cols=54 Identities=17% Similarity=0.223 Sum_probs=45.1
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
++|++|+||||.+. ...++++.+++|++|.+. ...|+|+|||+...++..+..+
T Consensus 6 kli~~DlDGTLl~~--------------~~~i~~~~~~~l~~l~~~-g~~~~i~TGr~~~~~~~~~~~l 59 (227)
T 1l6r_A 6 RLAAIDVDGNLTDR--------------DRLISTKAIESIRSAEKK-GLTVSLLSGNVIPVVYALKIFL 59 (227)
T ss_dssp CEEEEEHHHHSBCT--------------TSCBCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH
T ss_pred EEEEEECCCCCcCC--------------CCcCCHHHHHHHHHHHHC-CCEEEEECCCCcHHHHHHHHHh
Confidence 79999999999974 224678999999999864 6789999999999888887654
No 56
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=97.02 E-value=0.00061 Score=70.82 Aligned_cols=53 Identities=13% Similarity=0.258 Sum_probs=43.9
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHh
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVL 657 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~ 657 (673)
-++|++|+||||.+.. ....+++.+++|++|.+. ...|+|+|||+...+..++
T Consensus 27 ikli~~DlDGTLl~~~-------------~~~is~~~~~al~~l~~~-Gi~v~iaTGR~~~~~~~~~ 79 (301)
T 2b30_A 27 IKLLLIDFDGTLFVDK-------------DIKVPSENIDAIKEAIEK-GYMVSICTGRSKVGILSAF 79 (301)
T ss_dssp CCEEEEETBTTTBCCT-------------TTCSCHHHHHHHHHHHHH-TCEEEEECSSCHHHHHHHH
T ss_pred ccEEEEECCCCCcCCC-------------CCccCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHh
Confidence 4799999999999741 223578999999999865 6789999999999888777
No 57
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=97.01 E-value=0.00054 Score=69.67 Aligned_cols=56 Identities=13% Similarity=0.151 Sum_probs=44.6
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChh-HHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPD-LKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~-~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-+++++|+||||.... ...+++ ++++|++|.+. ...|+|+|||+...+...+..+.
T Consensus 3 ~kli~~DlDGTLl~~~--------------~~i~~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~ 59 (271)
T 1rlm_A 3 VKVIVTDMDGTFLNDA--------------KTYNQPRFMAQYQELKKR-GIKFVVASGNQYYQLISFFPELK 59 (271)
T ss_dssp CCEEEECCCCCCSCTT--------------SCCCHHHHHHHHHHHHHH-TCEEEEECSSCHHHHGGGCTTTT
T ss_pred ccEEEEeCCCCCCCCC--------------CcCCHHHHHHHHHHHHHC-CCEEEEEeCCcHHHHHHHHHhcC
Confidence 3699999999999742 234566 58999999763 57899999999999988876653
No 58
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=97.00 E-value=0.00065 Score=67.43 Aligned_cols=54 Identities=13% Similarity=0.220 Sum_probs=44.2
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
+++++|+||||++.. ...++++.++|++|.+. ...|+++|||+...++..+..+
T Consensus 4 kli~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~~-G~~v~i~TGR~~~~~~~~~~~l 57 (231)
T 1wr8_A 4 KAISIDIDGTITYPN--------------RMIHEKALEAIRRAESL-GIPIMLVTGNTVQFAEAASILI 57 (231)
T ss_dssp CEEEEESTTTTBCTT--------------SCBCHHHHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHHH
T ss_pred eEEEEECCCCCCCCC--------------CcCCHHHHHHHHHHHHC-CCEEEEEcCCChhHHHHHHHHc
Confidence 689999999999742 24578999999999765 6889999999998887776543
No 59
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=96.99 E-value=0.00083 Score=68.10 Aligned_cols=56 Identities=16% Similarity=0.263 Sum_probs=46.5
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||... ....+++..++|++|.+. ...|+++|||+...+...+..+.
T Consensus 5 ~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~ 60 (279)
T 4dw8_A 5 YKLIVLDLDGTLTNS--------------KKEISSRNRETLIRIQEQ-GIRLVLASGRPTYGIVPLANELR 60 (279)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTT
T ss_pred ceEEEEeCCCCCCCC--------------CCccCHHHHHHHHHHHHC-CCEEEEEcCCChHHHHHHHHHhC
Confidence 479999999999974 234678999999999876 68999999999998888776543
No 60
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=96.95 E-value=0.0031 Score=67.41 Aligned_cols=151 Identities=11% Similarity=0.007 Sum_probs=88.2
Q ss_pred CCceEEEeeccccc-CChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 362 GRKVMLGVDRLDMI-KGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 362 ~~~iIl~VgRLd~~-KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
...+++++|++... |+...+..+++.+.+ . + +.+++++++. +.. .+ . .+ . ..
T Consensus 232 ~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~-~-~----~~~v~~~g~~--~~~---~l----~----~~------~--~~ 284 (398)
T 3oti_A 232 RPEVAITMGTIELQAFGIGAVEPIIAAAGE-V-D----ADFVLALGDL--DIS---PL----G----TL------P--RN 284 (398)
T ss_dssp SCEEEECCTTTHHHHHCGGGHHHHHHHHHT-S-S----SEEEEECTTS--CCG---GG----C----SC------C--TT
T ss_pred CCEEEEEcCCCccccCcHHHHHHHHHHHHc-C-C----CEEEEEECCc--Chh---hh----c----cC------C--Cc
Confidence 35677789999654 355444444444432 2 2 3455555432 110 11 0 00 0 13
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEE----eCCCCch--hhc--cCceEEECCC
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL----SEFAGAA--QSL--GAGAILVNPW 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVl----Se~aG~~--~~l--g~~gllVnP~ 512 (673)
|.+ .+.++.. .++..||++|.. |-..+..|||++| .|+|+ .+-.+.+ +.+ ...|+++++.
T Consensus 285 v~~-~~~~~~~---~ll~~ad~~v~~----~G~~t~~Eal~~G----~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~ 352 (398)
T 3oti_A 285 VRA-VGWTPLH---TLLRTCTAVVHH----GGGGTVMTAIDAG----IPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSD 352 (398)
T ss_dssp EEE-ESSCCHH---HHHTTCSEEEEC----CCHHHHHHHHHHT----CCEEECCCTTCCSSCTTHHHHHHHTSEEECCGG
T ss_pred EEE-EccCCHH---HHHhhCCEEEEC----CCHHHHHHHHHhC----CCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCC
Confidence 553 5677644 577889999953 4456889999995 78887 5556666 666 3568888876
Q ss_pred --CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHH
Q 005855 513 --NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFV 556 (673)
Q Consensus 513 --D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl 556 (673)
+.+.++ ++|+++ +.++.+.+..++......+...++.+.
T Consensus 353 ~~~~~~l~----~ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 393 (398)
T 3oti_A 353 KVDADLLR----RLIGDE-SLRTAAREVREEMVALPTPAETVRRIV 393 (398)
T ss_dssp GCCHHHHH----HHHHCH-HHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred CCCHHHHH----HHHcCH-HHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 555555 777753 345554455555566666666555443
No 61
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=96.95 E-value=0.0011 Score=61.55 Aligned_cols=59 Identities=15% Similarity=0.104 Sum_probs=43.5
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC---HHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~---~~~L~~~~~~~ 660 (673)
.+++++|+||||.... .+ ....+.+.++++|++|.+. ...|+|+|||+ ...+..|+...
T Consensus 3 ~k~i~~DlDGTL~~~~-~~---------~i~~~~~~~~~al~~l~~~-G~~iii~TgR~~~~~~~~~~~l~~~ 64 (142)
T 2obb_A 3 AMTIAVDFDGTIVEHR-YP---------RIGEEIPFAVETLKLLQQE-KHRLILWSVREGELLDEAIEWCRAR 64 (142)
T ss_dssp CCEEEECCBTTTBCSC-TT---------SCCCBCTTHHHHHHHHHHT-TCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred CeEEEEECcCCCCCCC-Cc---------cccccCHHHHHHHHHHHHC-CCEEEEEeCCCcccHHHHHHHHHHc
Confidence 4689999999999742 11 1123456899999999864 68999999998 56667776553
No 62
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=96.90 E-value=0.0093 Score=63.78 Aligned_cols=106 Identities=10% Similarity=-0.025 Sum_probs=67.6
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCC----CCchhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEF----AGAAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~----aG~~~~l--g~~gllVnP~-- 512 (673)
+.+ .+.++.. .++..||++|..+ |. .+..|++++| .|+|+--. ...++.+ ...|+.+++.
T Consensus 299 v~~-~~~~~~~---~ll~~ad~~v~~~---G~-~t~~Ea~~~G----~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~ 366 (415)
T 3rsc_A 299 VEA-HRWVPHV---KVLEQATVCVTHG---GM-GTLMEALYWG----RPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKA 366 (415)
T ss_dssp EEE-ESCCCHH---HHHHHEEEEEESC---CH-HHHHHHHHTT----CCEEECCCSGGGHHHHHHHHHHTCEEECCGGGC
T ss_pred EEE-EecCCHH---HHHhhCCEEEECC---cH-HHHHHHHHhC----CCEEEeCCcchHHHHHHHHHHcCCEEEcccCCC
Confidence 553 4777765 7889999999765 32 5779999995 77777433 2233334 2457888775
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHHHHHHHH
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAETFVSEL 559 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~~fl~~L 559 (673)
+.++++++|.++|+++. .+..+.+...+..........++.+.+.+
T Consensus 367 ~~~~l~~~i~~ll~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 367 DGDTLLAAVGAVAADPA-LLARVEAMRGHVRRAGGAARAADAVEAYL 412 (415)
T ss_dssp CHHHHHHHHHHHHTCHH-HHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 89999999999998642 33333333333344455555555444433
No 63
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=96.84 E-value=0.00094 Score=67.71 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=38.9
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++|+||+||||... ....+++..++|++|.+. ...|+++|||+...+...+..+.
T Consensus 5 ~kli~~DlDGTLl~~--------------~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~ 60 (279)
T 3mpo_A 5 IKLIAIDIDGTLLNE--------------KNELAQATIDAVQAAKAQ-GIKVVLCTGRPLTGVQPYLDAMD 60 (279)
T ss_dssp CCEEEECC-------------------------CHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTT
T ss_pred eEEEEEcCcCCCCCC--------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcC
Confidence 478999999999974 234678999999999875 68999999999999988886653
No 64
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=96.79 E-value=0.0013 Score=67.12 Aligned_cols=55 Identities=15% Similarity=0.248 Sum_probs=45.3
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
-++++||+||||... ....+++..++|++|.+. ...|+++|||+...++..+..+
T Consensus 6 ~kli~fDlDGTLl~~--------------~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~~ 60 (290)
T 3dnp_A 6 KQLLALNIDGALLRS--------------NGKIHQATKDAIEYVKKK-GIYVTLVTNRHFRSAQKIAKSL 60 (290)
T ss_dssp CCEEEECCCCCCSCT--------------TSCCCHHHHHHHHHHHHT-TCEEEEBCSSCHHHHHHHHHHT
T ss_pred ceEEEEcCCCCCCCC--------------CCccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHHc
Confidence 479999999999974 234678999999999875 6889999999998887776544
No 65
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=96.77 E-value=0.0015 Score=67.57 Aligned_cols=57 Identities=12% Similarity=0.127 Sum_probs=46.4
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChh-HHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPD-LKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~-~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.-++|+||+||||.... ...+++ +.++|++|.+. ...|+++|||+...++..+..+.
T Consensus 36 ~iKli~fDlDGTLld~~--------------~~i~~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l~ 93 (304)
T 3l7y_A 36 SVKVIATDMDGTFLNSK--------------GSYDHNRFQRILKQLQER-DIRFVVASSNPYRQLREHFPDCH 93 (304)
T ss_dssp CCSEEEECCCCCCSCTT--------------SCCCHHHHHHHHHHHHHT-TCEEEEECSSCHHHHHTTCTTTG
T ss_pred eeEEEEEeCCCCCCCCC--------------CccCHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhC
Confidence 35899999999999742 234566 88999999875 68999999999999998887654
No 66
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=96.73 E-value=0.0011 Score=66.61 Aligned_cols=52 Identities=21% Similarity=0.195 Sum_probs=40.9
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
++|++|+||||. . . . .+ ++++++|++|.+. ...|+|+|||+...+...+..+
T Consensus 3 kli~~DlDGTLl-~-~-~------------~~-~~~~~~l~~l~~~-g~~~~i~Tgr~~~~~~~~~~~~ 54 (249)
T 2zos_A 3 RLIFLDIDKTLI-P-G-Y------------EP-DPAKPIIEELKDM-GFEIIFNSSKTRAEQEYYRKEL 54 (249)
T ss_dssp EEEEECCSTTTC-T-T-S------------CS-GGGHHHHHHHHHT-TEEEEEBCSSCHHHHHHHHHHH
T ss_pred cEEEEeCCCCcc-C-C-C------------Cc-HHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 689999999999 3 1 1 12 3488999999764 6889999999999888877653
No 67
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=96.66 E-value=0.0011 Score=66.63 Aligned_cols=56 Identities=18% Similarity=0.294 Sum_probs=45.6
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||.... ...++...++|++|.+. ...|+++|||+...++..+..++
T Consensus 5 ~kli~fDlDGTLl~~~--------------~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~~~ 60 (274)
T 3fzq_A 5 YKLLILDIDGTLRDEV--------------YGIPESAKHAIRLCQKN-HCSVVICTGRSMGTIQDDVLSLG 60 (274)
T ss_dssp CCEEEECSBTTTBBTT--------------TBCCHHHHHHHHHHHHT-TCEEEEECSSCTTTSCHHHHTTC
T ss_pred ceEEEEECCCCCCCCC--------------CcCCHHHHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHcC
Confidence 4789999999999742 24678999999999765 68999999999988877775543
No 68
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=96.58 E-value=0.001 Score=67.08 Aligned_cols=53 Identities=15% Similarity=0.196 Sum_probs=41.6
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
+++++|+||||.... ....+++.+++|++|.+. ...|+++|||+ ..+...+..
T Consensus 3 kli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~~-G~~~~iaTGR~-~~~~~~~~~ 55 (261)
T 2rbk_A 3 KALFFDIDGTLVSFE-------------THRIPSSTIEALEAAHAK-GLKIFIATGRP-KAIINNLSE 55 (261)
T ss_dssp CEEEECSBTTTBCTT-------------TSSCCHHHHHHHHHHHHT-TCEEEEECSSC-GGGCCSCHH
T ss_pred cEEEEeCCCCCcCCC-------------CCcCCHHHHHHHHHHHHC-CCEEEEECCCh-HHHHHHHHH
Confidence 689999999999742 122678999999999874 57899999999 877655543
No 69
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=96.53 E-value=0.0021 Score=64.72 Aligned_cols=49 Identities=14% Similarity=0.230 Sum_probs=40.9
Q ss_pred EEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 593 LLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 593 ll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
+++||+||||... . ..++.+.++|++|.+. ...|+++|||....++ .++
T Consensus 2 li~~DlDGTLl~~--------------~-~i~~~~~~al~~l~~~-Gi~v~iaTGR~~~~~~-~l~ 50 (259)
T 3zx4_A 2 IVFTDLDGTLLDE--------------R-GELGPAREALERLRAL-GVPVVPVTAKTRKEVE-ALG 50 (259)
T ss_dssp EEEECCCCCCSCS--------------S-SSCSTTHHHHHHHHHT-TCCEEEBCSSCHHHHH-HTT
T ss_pred EEEEeCCCCCcCC--------------C-cCCHHHHHHHHHHHHC-CCeEEEEeCCCHHHHH-HcC
Confidence 7999999999964 2 4567889999999864 6789999999999998 554
No 70
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=96.49 E-value=0.0025 Score=64.09 Aligned_cols=55 Identities=22% Similarity=0.281 Sum_probs=43.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
-++++||+||||.... ....+++..++|++|.+. ...|++.|||+...+ ..+..+
T Consensus 12 iKli~~DlDGTLl~~~-------------~~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~-~~~~~l 66 (268)
T 3r4c_A 12 IKVLLLDVDGTLLSFE-------------THKVSQSSIDALKKVHDS-GIKIVIATGRAASDL-HEIDAV 66 (268)
T ss_dssp CCEEEECSBTTTBCTT-------------TCSCCHHHHHHHHHHHHT-TCEEEEECSSCTTCC-GGGTTS
T ss_pred eEEEEEeCCCCCcCCC-------------CCcCCHHHHHHHHHHHHC-CCEEEEEcCCChHHh-HHHHhc
Confidence 4899999999999631 234578999999999876 689999999998877 344433
No 71
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=96.49 E-value=0.0036 Score=64.14 Aligned_cols=54 Identities=15% Similarity=0.262 Sum_probs=44.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
+++++|+||||.... ...++..+++|++|.+. ...|+++|||+...+...+...
T Consensus 5 kli~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~~-G~~~~iaTGR~~~~~~~~~~~l 58 (288)
T 1nrw_A 5 KLIAIDLDGTLLNSK--------------HQVSLENENALRQAQRD-GIEVVVSTGRAHFDVMSIFEPL 58 (288)
T ss_dssp CEEEEECCCCCSCTT--------------SCCCHHHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHGGG
T ss_pred EEEEEeCCCCCCCCC--------------CccCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 689999999999742 23568899999998864 5788999999999988887654
No 72
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=96.48 E-value=0.0048 Score=58.89 Aligned_cols=73 Identities=15% Similarity=0.143 Sum_probs=48.4
Q ss_pred hhccCeEEEEcccccccCCCCCCCCCCccc-----------cccccCCChhHHHHHHHHhcCCCCeEEEEcCCC-HHhHH
Q 005855 587 LRSNNRLLILGFNATLTEPVDTPGRRGDQI-----------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSD-RNVLD 654 (673)
Q Consensus 587 ~~s~~rll~lDyDGTL~~~~~~p~~~~~~~-----------~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~-~~~L~ 654 (673)
.....++++||+||||.+..... ..+... ......+.+.+.++|+.|.+. ...++|+||++ ...++
T Consensus 23 m~~~~k~vifDlDGTL~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~-G~~v~ivT~~~~~~~~~ 100 (187)
T 2wm8_A 23 MARLPKLAVFDLDYTLWPFWVDT-HVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSL-GVPGAAASRTSEIEGAN 100 (187)
T ss_dssp HHTSCSEEEECSBTTTBSSCTTT-SSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHH-TCCEEEEECCSCHHHHH
T ss_pred HHhccCEEEEcCCCCcchHHHhh-ccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHC-CceEEEEeCCCChHHHH
Confidence 33445799999999998642110 000000 012356789999999999874 56899999999 68777
Q ss_pred HHhcccc
Q 005855 655 KVLDLVL 661 (673)
Q Consensus 655 ~~~~~~~ 661 (673)
.++....
T Consensus 101 ~~l~~~g 107 (187)
T 2wm8_A 101 QLLELFD 107 (187)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 7766543
No 73
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=96.44 E-value=0.14 Score=54.90 Aligned_cols=146 Identities=10% Similarity=-0.013 Sum_probs=84.9
Q ss_pred CCceEEEeeccc-ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 362 GRKVMLGVDRLD-MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 362 ~~~iIl~VgRLd-~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
.+.++++.|++. ..+.+...++|++.+ +++ +|.++++...+. . +.. ..
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~----vv~~~g~~~~~~----------------~----~~~--~~ 269 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRR----VVLSSGWAGLGR----------------I----DEG--DD 269 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCC----EEEECTTTTCCC----------------S----SCC--TT
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCE----EEEEeCCccccc----------------c----cCC--CC
Confidence 456777889998 666677777777653 222 343332211000 0 000 13
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCch----hhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAA----QSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~----~~l--g~~gllVnP~-- 512 (673)
+.+ .+.++.. .++..||++|..+ |. .+..|++++| .|+|+--+.+-- ..+ ...|+.+++.
T Consensus 270 v~~-~~~~~~~---~ll~~~d~~v~~g---G~-~t~~Eal~~G----vP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~ 337 (404)
T 3h4t_A 270 CLV-VGEVNHQ---VLFGRVAAVVHHG---GA-GTTTAVTRAG----APQVVVPQKADQPYYAGRVADLGVGVAHDGPTP 337 (404)
T ss_dssp EEE-ESSCCHH---HHGGGSSEEEECC---CH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EEE-ecCCCHH---HHHhhCcEEEECC---cH-HHHHHHHHcC----CCEEEcCCcccHHHHHHHHHHCCCEeccCcCCC
Confidence 443 4677765 4667999999655 32 5778999995 777776554321 112 1356777653
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCCHHHHHH
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHTAQEWAE 553 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~~~~W~~ 553 (673)
+.++++++|.++|+ + +.++++++..+.+........++
T Consensus 338 ~~~~l~~ai~~ll~-~--~~~~~~~~~~~~~~~~~~~~~~~ 375 (404)
T 3h4t_A 338 TVESLSAALATALT-P--GIRARAAAVAGTIRTDGTTVAAK 375 (404)
T ss_dssp CHHHHHHHHHHHTS-H--HHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHhC-H--HHHHHHHHHHHHHhhhHHHHHHH
Confidence 78999999999997 3 34444444444443333333333
No 74
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=96.36 E-value=0.0019 Score=66.02 Aligned_cols=61 Identities=13% Similarity=0.081 Sum_probs=43.6
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
..++++||+||||++..-.| .....-.++.+.|+.++.+....++++|||+...+...+..
T Consensus 21 ~~kliifDlDGTLlds~i~~---------~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~ 81 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHTIDE---------QKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGR 81 (289)
T ss_dssp CSEEEEEETBTTTBCSSCCH---------HHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHH
T ss_pred CCeEEEEECCCCCcCCCCCc---------chHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHh
Confidence 35899999999999853111 11112234456666788888889999999999998887754
No 75
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=96.26 E-value=0.0038 Score=62.55 Aligned_cols=55 Identities=11% Similarity=0.234 Sum_probs=43.1
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+++++|+||||.... ...+++..++|++|.+. ...|++.|||+...+...+..+
T Consensus 3 ~kli~~DlDGTLl~~~--------------~~i~~~~~~al~~l~~~-G~~~~~aTGR~~~~~~~~~~~l 57 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDEQ--------------KQLPLSTIEAVRRLKQS-GVYVAIATGRAPFMFEHVRKQL 57 (258)
T ss_dssp CCEEEECTBTTTBCTT--------------SCCCHHHHHHHHHHHHT-TCEEEEECSSCGGGSHHHHHHH
T ss_pred ceEEEEeCCCCCcCCC--------------CccCHHHHHHHHHHHHC-CCEEEEECCCChHHHHHHHHhc
Confidence 3789999999999742 23568899999999764 5688999999998776665543
No 76
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=96.24 E-value=0.0022 Score=64.26 Aligned_cols=51 Identities=14% Similarity=0.101 Sum_probs=40.1
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
++|++|+||||.+.. . . .+++.++|+++.+ ...|+|+|||+...+..++..
T Consensus 4 ~li~~DlDGTLl~~~-------------~-~-~~~~~~~l~~~~~--gi~v~iaTGR~~~~~~~~~~~ 54 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ-------------Q-A-LEHLQEYLGDRRG--NFYLAYATGRSYHSARELQKQ 54 (244)
T ss_dssp EEEEECTBTTTBSCH-------------H-H-HHHHHHHHHTTGG--GEEEEEECSSCHHHHHHHHHH
T ss_pred eEEEEeCCCCCcCCH-------------H-H-HHHHHHHHHHhcC--CCEEEEEcCCCHHHHHHHHHH
Confidence 599999999999731 1 1 1577888888653 588999999999999888765
No 77
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=96.21 E-value=0.0052 Score=55.45 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=37.7
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
+++++|+||||+.....+ . ....+++...+.|+.|.+. ...++|+|||+.
T Consensus 2 k~i~~DlDGTL~~~~~~~------~--~~~~~~~~~~~~l~~l~~~-Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 2 KKLIVDLDGTLTQANTSD------Y--RNVLPRLDVIEQLREYHQL-GFEIVISTARNM 51 (126)
T ss_dssp CEEEECSTTTTBCCCCSC------G--GGCCBCHHHHHHHHHHHHT-TCEEEEEECTTT
T ss_pred CEEEEecCCCCCCCCCCc------c--ccCCCCHHHHHHHHHHHhC-CCeEEEEeCCCh
Confidence 589999999999753211 0 1134678999999999875 678999999986
No 78
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=95.91 E-value=0.009 Score=56.14 Aligned_cols=53 Identities=19% Similarity=0.194 Sum_probs=39.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
+++|||.||||+.....- . .......+.+++.++|+.|.+. .-.++|+|+++.
T Consensus 2 k~v~~D~DGtL~~~~~~~---~--~~~~~~~~~~g~~~~l~~L~~~-g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 2 KLIILDRDGVVNQDSDAF---V--KSPDEWIALPGSLQAIARLTQA-DWTVVLATNQSG 54 (179)
T ss_dssp CEEEECSBTTTBCCCTTC---C--CSGGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTT
T ss_pred CEEEEcCCCccccCCCcc---C--CCHHHceECcCHHHHHHHHHHC-CCEEEEEECCCc
Confidence 689999999999753211 0 0013456789999999999875 578999999985
No 79
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=95.85 E-value=0.16 Score=59.22 Aligned_cols=173 Identities=14% Similarity=0.106 Sum_probs=109.5
Q ss_pred ceEEEeecccccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCcccEEE
Q 005855 364 KVMLGVDRLDMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVPIHH 443 (673)
Q Consensus 364 ~iIl~VgRLd~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~pV~~ 443 (673)
.++.+.-++ .|=-+..++.+.++|++.|+-+ |++...+. .....+ .+.+.+ +|.. -..|+|
T Consensus 524 v~f~~fN~~--~Ki~p~~~~~W~~IL~~vP~S~----L~Ll~~~~----~~~~~l----~~~~~~----~gi~-~~r~~f 584 (723)
T 4gyw_A 524 IVYCNFNQL--YKIDPSTLQMWANILKRVPNSV----LWLLRFPA----VGEPNI----QQYAQN----MGLP-QNRIIF 584 (723)
T ss_dssp EEEECCSCG--GGCCHHHHHHHHHHHHHCSSEE----EEEEETTG----GGHHHH----HHHHHH----TTCC-GGGEEE
T ss_pred EEEEeCCcc--ccCCHHHHHHHHHHHHhCCCCe----EEEEeCcH----HHHHHH----HHHHHh----cCCC-cCeEEE
Confidence 333344444 4557899999999999999753 66665332 111223 333332 2321 134665
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCc-h-----hhc---cCceEEECCCCH
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGA-A-----QSL---GAGAILVNPWNI 514 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~-~-----~~l---g~~gllVnP~D~ 514 (673)
.+..+.++..+.|+.+||++-|--+-| +.+..||+.+ |++|+|--+.. + ..+ |-.-++ -.|.
T Consensus 585 -~~~~~~~~~l~~~~~~Di~LDt~p~~g-~tT~~eal~~-----GvPvvt~~g~~~~sR~~~s~l~~~gl~e~i--a~~~ 655 (723)
T 4gyw_A 585 -SPVAPKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWA-----GTPMVTMPGETLASRVAASQLTCLGCLELI--AKNR 655 (723)
T ss_dssp -EECCCHHHHHHHGGGCSEEECCSSSCC-SHHHHHHHHT-----TCCEEBCCCSSGGGTHHHHHHHHHTCGGGB--CSSH
T ss_pred -CCCCCHHHHHHHhCCCeEEeCCCCcCC-HHHHHHHHHc-----CCCEEEccCCCccHhHHHHHHHHcCCcccc--cCCH
Confidence 567899999999999999999998877 7899999999 66676643211 0 111 222222 2467
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHhhHHHhh---CCHHHHHHHHHHHHHHhHHH
Q 005855 515 TEVANAIARALNMSPEEREKRHWHNFTHVTT---HTAQEWAETFVSELNDTVVE 565 (673)
Q Consensus 515 ~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~---~~~~~W~~~fl~~L~~~~~~ 565 (673)
++..+.-.++-+++ +.+....+++++...+ +|...|++.|-..+...+..
T Consensus 656 ~~Y~~~a~~la~d~-~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 656 QEYEDIAVKLGTDL-EYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCH-HHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 77666655555554 3455544555555543 58899999988888877654
No 80
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=95.64 E-value=0.06 Score=57.77 Aligned_cols=122 Identities=11% Similarity=-0.007 Sum_probs=76.6
Q ss_pred CCceEEEeecc-cccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 362 GRKVMLGVDRL-DMIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 362 ~~~iIl~VgRL-d~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
...++++.|++ +..|.+..+++|++.+ + . .++.+.++. + .+ . ..+ . ..
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~----~-~----~~v~~~g~~--~-~~-------~----~~~------~--~~ 286 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH----G-R----RVILSRGWA--D-LV-------L----PDD------G--AD 286 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT----T-C----CEEECTTCT--T-CC-------C----SSC------G--GG
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC----C-C----eEEEEeCCC--c-cc-------c----cCC------C--CC
Confidence 35678899999 6888888888888754 2 2 133332211 1 00 0 000 0 12
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (673)
+. +.+.+++.+ ++..||++|..+ |. .++.|+|++| .|+|+-...+ .++.+ ...|+.+++.
T Consensus 287 v~-~~~~~~~~~---~l~~~d~~v~~~---G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 354 (415)
T 1iir_A 287 CF-AIGEVNHQV---LFGRVAAVIHHG---GA-GTTHVAARAG----APQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354 (415)
T ss_dssp EE-ECSSCCHHH---HGGGSSEEEECC---CH-HHHHHHHHHT----CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSC
T ss_pred EE-EeCcCChHH---HHhhCCEEEeCC---Ch-hHHHHHHHcC----CCEEECCCCCccHHHHHHHHHCCCcccCCcCCC
Confidence 44 467888765 469999999753 43 6899999995 7888776543 22323 2467888763
Q ss_pred CHHHHHHHHHHHhcC
Q 005855 513 NITEVANAIARALNM 527 (673)
Q Consensus 513 D~~~lA~aI~~aL~m 527 (673)
+.++++++|.++ +.
T Consensus 355 ~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 355 TFDSLSAALATA-LT 368 (415)
T ss_dssp CHHHHHHHHHHH-TS
T ss_pred CHHHHHHHHHHH-cC
Confidence 889999999999 65
No 81
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=95.52 E-value=0.0083 Score=55.55 Aligned_cols=66 Identities=21% Similarity=0.098 Sum_probs=45.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||+...... ..........+++..+.|+.|.+. ...++|+||++...++..+....
T Consensus 9 ~k~v~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~l~~~g 74 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLYY----TEHGETIKVFNVLDGIGIKLLQKM-GITLAVISGRDSAPLITRLKELG 74 (162)
T ss_dssp CCEEEECCTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHTT-TCEEEEEESCCCHHHHHHHHHTT
T ss_pred eeEEEEecCcceECCceee----cCCCceeeeecccHHHHHHHHHHC-CCEEEEEeCCCcHHHHHHHHHcC
Confidence 5789999999999642100 000001223456788999999864 56899999999988888776543
No 82
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=95.38 E-value=0.0087 Score=56.88 Aligned_cols=66 Identities=20% Similarity=0.187 Sum_probs=44.6
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||+.....- ....+.....+++..++|+.|.+. ...++|+||+....++..+....
T Consensus 8 ik~i~~DlDGTL~~~~~~~----~~~~~~~~~~~~~~~~~l~~L~~~-G~~~~i~Tg~~~~~~~~~~~~lg 73 (180)
T 1k1e_A 8 IKFVITDVDGVLTDGQLHY----DANGEAIKSFHVRDGLGIKMLMDA-DIQVAVLSGRDSPILRRRIADLG 73 (180)
T ss_dssp CCEEEEECTTTTSCSEEEE----ETTEEEEEEEEHHHHHHHHHHHHT-TCEEEEEESCCCHHHHHHHHHHT
T ss_pred CeEEEEeCCCCcCCCCeee----ccCcceeeeeccchHHHHHHHHHC-CCeEEEEeCCCcHHHHHHHHHcC
Confidence 4799999999999742100 000001123456778899999875 56899999999988887776543
No 83
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=95.16 E-value=0.036 Score=53.64 Aligned_cols=67 Identities=13% Similarity=0.172 Sum_probs=45.6
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
.-+++|||+||||+....... ...........+.+.+.++|+.|.+. .-.++|+||.....+.+..+
T Consensus 5 ~~kav~fDlDGTL~d~~~~~~-~~~~~~~~~~~~~pg~~e~L~~L~~~-g~~~~i~T~~~~~~~~~~~~ 71 (196)
T 2oda_A 5 TFPALLFGLSGCLVDFGAQAA-TSDTPDDEHAQLTPGAQNALKALRDQ-GMPCAWIDELPEALSTPLAA 71 (196)
T ss_dssp CCSCEEEETBTTTBCTTSTTT-SCSSCCGGGGSBCTTHHHHHHHHHHH-TCCEEEECCSCHHHHHHHHT
T ss_pred cCCEEEEcCCCceEecccccc-chhhcccccCCcCcCHHHHHHHHHHC-CCEEEEEcCChHHHHHHhcC
Confidence 346799999999987421110 00000112346779999999999764 46789999999988766665
No 84
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=94.97 E-value=0.41 Score=51.14 Aligned_cols=93 Identities=5% Similarity=-0.038 Sum_probs=62.0
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECCC--
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNPW-- 512 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP~-- 512 (673)
+. +.+.+++. .+|..||++|..+ | ..+.+|++++| .|+|+.-..+ .+..+ ...|+.+++.
T Consensus 307 v~-~~~~~~~~---~~l~~~d~~v~~~---G-~~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 374 (424)
T 2iya_A 307 VE-VHQWVPQL---DILTKASAFITHA---G-MGSTMEALSNA----VPMVAVPQIAEQTMNAERIVELGLGRHIPRDQV 374 (424)
T ss_dssp EE-EESSCCHH---HHHTTCSEEEECC---C-HHHHHHHHHTT----CCEEECCCSHHHHHHHHHHHHTTSEEECCGGGC
T ss_pred eE-EecCCCHH---HHHhhCCEEEECC---c-hhHHHHHHHcC----CCEEEecCccchHHHHHHHHHCCCEEEcCcCCC
Confidence 44 34677765 6899999988643 3 36899999995 7888876643 12222 2457888765
Q ss_pred CHHHHHHHHHHHhcCCHHHHHHHHHHhhHHHhhCC
Q 005855 513 NITEVANAIARALNMSPEEREKRHWHNFTHVTTHT 547 (673)
Q Consensus 513 D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v~~~~ 547 (673)
+.++++++|.++|+.+ +.+++.+++.+.+...+
T Consensus 375 ~~~~l~~~i~~ll~~~--~~~~~~~~~~~~~~~~~ 407 (424)
T 2iya_A 375 TAEKLREAVLAVASDP--GVAERLAAVRQEIREAG 407 (424)
T ss_dssp CHHHHHHHHHHHHHCH--HHHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHHcCH--HHHHHHHHHHHHHHhcC
Confidence 8999999999999864 33444444444444433
No 85
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=94.96 E-value=0.013 Score=51.98 Aligned_cols=51 Identities=18% Similarity=0.159 Sum_probs=39.4
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
+++++|+||||.. ...+.+++.+.|+.|.+. ...++|+|+++...++..+.
T Consensus 3 k~i~~D~DgtL~~---------------~~~~~~~~~~~l~~L~~~-G~~~~i~S~~~~~~~~~~l~ 53 (137)
T 2pr7_A 3 RGLIVDYAGVLDG---------------TDEDQRRWRNLLAAAKKN-GVGTVILSNDPGGLGAAPIR 53 (137)
T ss_dssp CEEEECSTTTTSS---------------CHHHHHHHHHHHHHHHHT-TCEEEEEECSCCGGGGHHHH
T ss_pred cEEEEeccceecC---------------CCccCccHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHH
Confidence 6799999999942 234568899999999875 57899999998876554443
No 86
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=94.82 E-value=0.025 Score=56.68 Aligned_cols=53 Identities=17% Similarity=0.228 Sum_probs=41.3
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcC---CCHHhHHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSG---R~~~~L~~~~~~ 659 (673)
-++++||.||||.... .+.++.+++|++|.+. .-.|+++|| |+...+.+.+..
T Consensus 8 ~kli~~DlDGTLl~~~---------------~~~~~~~~ai~~l~~~-Gi~v~l~Tgr~~r~~~~~~~~l~~ 63 (268)
T 3qgm_A 8 KKGYIIDIDGVIGKSV---------------TPIPEGVEGVKKLKEL-GKKIIFVSNNSTRSRRILLERLRS 63 (268)
T ss_dssp CSEEEEECBTTTEETT---------------EECHHHHHHHHHHHHT-TCEEEEEECCSSSCHHHHHHHHHH
T ss_pred CCEEEEcCcCcEECCC---------------EeCcCHHHHHHHHHHc-CCeEEEEeCcCCCCHHHHHHHHHH
Confidence 4799999999999631 1346899999999875 678999999 777777666654
No 87
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=94.60 E-value=0.052 Score=52.78 Aligned_cols=53 Identities=9% Similarity=0.076 Sum_probs=39.7
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
.++++||+||||+....... . .....+.+++.++|+.|.+. .-.++|+|+++.
T Consensus 25 ~k~v~~D~DGTL~~~~~~~~----~--~~~~~~~pg~~e~L~~L~~~-G~~~~ivTn~~~ 77 (211)
T 2gmw_A 25 VPAIFLDRDGTINVDHGYVH----E--IDNFEFIDGVIDAMRELKKM-GFALVVVTNQSG 77 (211)
T ss_dssp BCEEEECSBTTTBCCCSSCC----S--GGGCCBCTTHHHHHHHHHHT-TCEEEEEEECTH
T ss_pred CCEEEEcCCCCeECCCCccc----C--cccCcCCcCHHHHHHHHHHC-CCeEEEEECcCC
Confidence 46899999999997532110 0 13456788999999999875 578999999993
No 88
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=94.53 E-value=0.074 Score=50.60 Aligned_cols=69 Identities=19% Similarity=0.129 Sum_probs=45.3
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH---HhHHHHhcccc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR---NVLDKVLDLVL 661 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~---~~L~~~~~~~~ 661 (673)
++++||+||||+......-.......-....+.+++.++|+.|.+. .-.++|+|+.+. ..++..+....
T Consensus 4 k~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~~~~l~~~g 75 (189)
T 3ib6_A 4 THVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQL-GFKQAILSNTATSDTEVIKRVLTNFG 75 (189)
T ss_dssp CEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHT-TCEEEEEECCSSCCHHHHHHHHHHTT
T ss_pred eEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHC-CCEEEEEECCCccchHHHHHHHHhcC
Confidence 5799999999986322100000000002357889999999999875 578999998876 66666665433
No 89
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=94.51 E-value=0.035 Score=53.02 Aligned_cols=66 Identities=12% Similarity=0.191 Sum_probs=41.9
Q ss_pred hhccCeEEEEcccccccCCC----CCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 587 LRSNNRLLILGFNATLTEPV----DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 587 ~~s~~rll~lDyDGTL~~~~----~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
....-++++||+||||++.. ..+ . ........-...|+.|.+. ...|+|+||++...++.++....
T Consensus 22 ~~~~ik~vifD~DGTL~~~~~~~~~~~----~----~~~~~~~~d~~~l~~L~~~-g~~v~ivT~~~~~~~~~~l~~lg 91 (188)
T 2r8e_A 22 KAENIRLLILDVDGVLSDGLIYMGNNG----E----ELKAFNVRDGYGIRCALTS-DIEVAIITGRKAKLVEDRCATLG 91 (188)
T ss_dssp HHHTCSEEEECCCCCCBCSEEEEETTS----C----EEEEEEHHHHHHHHHHHTT-TCEEEEECSSCCHHHHHHHHHHT
T ss_pred HHhcCCEEEEeCCCCcCCCCEEecCCC----c----EEEEeecccHHHHHHHHHC-CCeEEEEeCCChHHHHHHHHHcC
Confidence 44567899999999999731 111 0 0000111122367777654 57899999999988888776543
No 90
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=94.42 E-value=0.022 Score=57.92 Aligned_cols=67 Identities=18% Similarity=0.164 Sum_probs=43.4
Q ss_pred cCeEEEEcccccccCCCC-----------CCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC---HHhHHH
Q 005855 590 NNRLLILGFNATLTEPVD-----------TPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD---RNVLDK 655 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~-----------~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~---~~~L~~ 655 (673)
+.++++||+||||....+ .+.............+.+.+.++|+.|.+. ...++|+|||+ +..+.+
T Consensus 58 ~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~-Gi~i~iaTnr~~~~~~~~~~ 136 (258)
T 2i33_A 58 KKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESK-GVDIYYISNRKTNQLDATIK 136 (258)
T ss_dssp SEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHT-TCEEEEEEEEEGGGHHHHHH
T ss_pred CCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHH
Confidence 457899999999997520 000000000001256778999999999875 57899999999 555555
Q ss_pred Hh
Q 005855 656 VL 657 (673)
Q Consensus 656 ~~ 657 (673)
++
T Consensus 137 ~L 138 (258)
T 2i33_A 137 NL 138 (258)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 91
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=94.21 E-value=0.055 Score=51.17 Aligned_cols=56 Identities=18% Similarity=0.198 Sum_probs=39.1
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCC
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR 648 (673)
+..++++||.||||...... ... ........+.+.+.++|+.|.+. .-.++|+|+.
T Consensus 12 ~~~k~~~~D~Dgtl~~~~~~--~~~-~~~~~~~~~~pg~~e~L~~L~~~-G~~l~i~Tn~ 67 (176)
T 2fpr_A 12 SSQKYLFIDRDGTLISEPPS--DFQ-VDRFDKLAFEPGVIPQLLKLQKA-GYKLVMITNQ 67 (176)
T ss_dssp -CCEEEEECSBTTTBCCC----CCC-CCSGGGCCBCTTHHHHHHHHHHT-TEEEEEEEEC
T ss_pred CcCcEEEEeCCCCeEcCCCC--CcC-cCCHHHCcCCccHHHHHHHHHHC-CCEEEEEECC
Confidence 45689999999999865310 000 00113467789999999999875 5689999998
No 92
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=94.05 E-value=0.03 Score=56.09 Aligned_cols=53 Identities=6% Similarity=0.047 Sum_probs=40.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcC---CCHHhHHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSG---R~~~~L~~~~~~ 659 (673)
-++|+||.||||... ..+.++.+++|++|.+. .-.|+++|| |+...+.+.+..
T Consensus 6 ~kli~~DlDGTLl~~---------------~~~~~~~~~ai~~l~~~-Gi~v~laTgrs~r~~~~~~~~l~~ 61 (266)
T 3pdw_A 6 YKGYLIDLDGTMYNG---------------TEKIEEACEFVRTLKDR-GVPYLFVTNNSSRTPKQVADKLVS 61 (266)
T ss_dssp CSEEEEECSSSTTCH---------------HHHHHHHHHHHHHHHHT-TCCEEEEESCCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcCceEeC---------------CEeCccHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHH
Confidence 479999999999853 12346889999999875 568999988 777766665544
No 93
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=93.60 E-value=0.05 Score=54.55 Aligned_cols=54 Identities=7% Similarity=0.165 Sum_probs=42.0
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~~~ 660 (673)
-++|+||.||||.... ... ++..++|++|.+. .-.|+++| ||+...+...+...
T Consensus 5 ~kli~~DlDGTLl~~~--------------~~i-~~~~eal~~l~~~-G~~vvl~Tn~~gr~~~~~~~~l~~l 61 (264)
T 3epr_A 5 YKGYLIDLDGTIYKGK--------------SRI-PAGERFIERLQEK-GIPYMLVTNNTTRTPESVQEMLRGF 61 (264)
T ss_dssp CCEEEECCBTTTEETT--------------EEC-HHHHHHHHHHHHH-TCCEEEEECCCSSCHHHHHHHHHTT
T ss_pred CCEEEEeCCCceEeCC--------------EEC-cCHHHHHHHHHHC-CCeEEEEeCCCCCCHHHHHHHHHHC
Confidence 4799999999998641 122 6899999998875 56788999 88888877777644
No 94
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=93.58 E-value=0.24 Score=52.99 Aligned_cols=136 Identities=10% Similarity=-0.022 Sum_probs=80.4
Q ss_pred CCceEEEeeccc---ccCChHHHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCc
Q 005855 362 GRKVMLGVDRLD---MIKGIPQKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTA 438 (673)
Q Consensus 362 ~~~iIl~VgRLd---~~KGi~~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~ 438 (673)
...++++.|++. ..|.+..+++|++.+ + . .++.+.+.. +. + . .. ..
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~----~-~----~~v~~~g~~--~~-~---~--------~~----~~---- 285 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ----G-R----RVILSRGWT--EL-V---L--------PD----DR---- 285 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT----T-C----CEEEECTTT--TC-C---C--------SC----CC----
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC----C-C----eEEEEeCCc--cc-c---c--------cC----CC----
Confidence 356778889984 566677777777653 1 2 233332221 10 0 0 00 00
Q ss_pred ccEEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhc--cCceEEECC-
Q 005855 439 VPIHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSL--GAGAILVNP- 511 (673)
Q Consensus 439 ~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~l--g~~gllVnP- 511 (673)
..+. +.+.++..+ +|..||++|. +-|. .+..|++++| .|+|+--..+ .+..+ ...|+.+++
T Consensus 286 ~~v~-~~~~~~~~~---ll~~~d~~v~---~~G~-~t~~Ea~~~G----~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~ 353 (416)
T 1rrv_A 286 DDCF-AIDEVNFQA---LFRRVAAVIH---HGSA-GTEHVATRAG----VPQLVIPRNTDQPYFAGRVAALGIGVAHDGP 353 (416)
T ss_dssp TTEE-EESSCCHHH---HGGGSSEEEE---CCCH-HHHHHHHHHT----CCEEECCCSBTHHHHHHHHHHHTSEEECSSS
T ss_pred CCEE-EeccCChHH---HhccCCEEEe---cCCh-hHHHHHHHcC----CCEEEccCCCCcHHHHHHHHHCCCccCCCCC
Confidence 1244 357777654 6799999997 3454 5999999995 7777765432 22223 245777765
Q ss_pred -CCHHHHHHHHHHHhcCCHHHHHHHHHHhhHHH
Q 005855 512 -WNITEVANAIARALNMSPEEREKRHWHNFTHV 543 (673)
Q Consensus 512 -~D~~~lA~aI~~aL~m~~~er~~r~~~~~~~v 543 (673)
.+.++++++|.++ +. + +.++++++..+.+
T Consensus 354 ~~~~~~l~~~i~~l-~~-~-~~~~~~~~~~~~~ 383 (416)
T 1rrv_A 354 TPTFESLSAALTTV-LA-P-ETRARAEAVAGMV 383 (416)
T ss_dssp CCCHHHHHHHHHHH-TS-H-HHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHh-hC-H-HHHHHHHHHHHHH
Confidence 5889999999999 64 3 3334444443333
No 95
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=92.91 E-value=0.11 Score=47.89 Aligned_cols=66 Identities=9% Similarity=0.163 Sum_probs=39.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||++....-........ .....-...|+.|.+. .-.++|+||++....+..+....
T Consensus 4 ik~vifD~DGTL~~~~~~~~~~~~~~~----~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~~g 69 (164)
T 3e8m_A 4 IKLILTDIDGVWTDGGMFYDQTGNEWK----KFNTSDSAGIFWAHNK-GIPVGILTGEKTEIVRRRAEKLK 69 (164)
T ss_dssp CCEEEECSTTTTSSSEEEECSSSCEEE----EEEGGGHHHHHHHHHT-TCCEEEECSSCCHHHHHHHHHTT
T ss_pred ceEEEEcCCCceEcCcEEEcCCCcEEE----EecCChHHHHHHHHHC-CCEEEEEeCCChHHHHHHHHHcC
Confidence 478999999999984210000000000 0001111256777664 46899999999988888776544
No 96
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=92.78 E-value=0.043 Score=51.98 Aligned_cols=66 Identities=18% Similarity=0.192 Sum_probs=38.7
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
-++++||+||||+.....-.......... ...+.+ .|+.|.+. .-.++|+||+....++..+....
T Consensus 12 ~k~vifD~DGTL~d~~~~~~~~~~~~~~~--~~~~~~--~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~lg 77 (176)
T 3mmz_A 12 IDAVVLDFDGTQTDDRVLIDSDGREFVSV--HRGDGL--GIAALRKS-GLTMLILSTEQNPVVAARARKLK 77 (176)
T ss_dssp CSEEEECCTTTTSCSCCEECTTCCEEEEE--EHHHHH--HHHHHHHT-TCEEEEEESSCCHHHHHHHHHHT
T ss_pred CCEEEEeCCCCcCcCCEeecCCccHhHhc--ccccHH--HHHHHHHC-CCeEEEEECcChHHHHHHHHHcC
Confidence 47899999999998211000000001100 001111 57777664 46899999999988888776544
No 97
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=92.64 E-value=0.11 Score=51.78 Aligned_cols=54 Identities=19% Similarity=0.169 Sum_probs=41.4
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhccc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLDLV 660 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~~~ 660 (673)
-+.++||.||||... ...+++..++|++|.+. .-.|+++| ||+...+.+.+...
T Consensus 17 ~~~v~~DlDGTLl~~---------------~~~~~~~~~~l~~l~~~-G~~~~~aTn~~gr~~~~~~~~~~~l 73 (271)
T 1vjr_A 17 IELFILDMDGTFYLD---------------DSLLPGSLEFLETLKEK-NKRFVFFTNNSSLGAQDYVRKLRNM 73 (271)
T ss_dssp CCEEEECCBTTTEET---------------TEECTTHHHHHHHHHHT-TCEEEEEESCTTSCHHHHHHHHHHT
T ss_pred CCEEEEcCcCcEEeC---------------CEECcCHHHHHHHHHHc-CCeEEEEECCCCCCHHHHHHHHHHc
Confidence 467999999999964 12346788889888765 45788999 99998888777553
No 98
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=92.40 E-value=0.15 Score=53.67 Aligned_cols=88 Identities=10% Similarity=-0.007 Sum_probs=54.3
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC----chhhcc--CceEEECCCCHHHH
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG----AAQSLG--AGAILVNPWNITEV 517 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG----~~~~lg--~~gllVnP~D~~~l 517 (673)
+.+.+++. .++..||+||.- -|+| +..|+|++| .|+|+--+.+ .+..+. ..|+.+++. +.+
T Consensus 292 ~~~~~p~~---~lL~~~~~~v~h---~G~~-s~~Eal~~G----vP~v~~P~~~dQ~~na~~v~~~G~g~~l~~~--~~~ 358 (400)
T 4amg_A 292 VVEWIPLG---ALLETCDAIIHH---GGSG-TLLTALAAG----VPQCVIPHGSYQDTNRDVLTGLGIGFDAEAG--SLG 358 (400)
T ss_dssp EECCCCHH---HHHTTCSEEEEC---CCHH-HHHHHHHHT----CCEEECCC---CHHHHHHHHHHTSEEECCTT--TCS
T ss_pred EEeecCHH---HHhhhhhheecc---CCcc-HHHHHHHhC----CCEEEecCcccHHHHHHHHHHCCCEEEcCCC--Cch
Confidence 45677765 467889998853 3554 678999995 7777754433 223231 246666654 457
Q ss_pred HHHHHHHhcCCHHHHHHHHHHhhHHHhhC
Q 005855 518 ANAIARALNMSPEEREKRHWHNFTHVTTH 546 (673)
Q Consensus 518 A~aI~~aL~m~~~er~~r~~~~~~~v~~~ 546 (673)
+++|.++|+++ +.+++.+++.+.+...
T Consensus 359 ~~al~~lL~d~--~~r~~a~~l~~~~~~~ 385 (400)
T 4amg_A 359 AEQCRRLLDDA--GLREAALRVRQEMSEM 385 (400)
T ss_dssp HHHHHHHHHCH--HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCH--HHHHHHHHHHHHHHcC
Confidence 89999999865 3444455555555444
No 99
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=92.38 E-value=0.056 Score=54.22 Aligned_cols=44 Identities=11% Similarity=0.210 Sum_probs=33.7
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHH
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~ 651 (673)
++|+||+||||.... . +.++..+.|+.|.+. ...|+++|||+..
T Consensus 2 k~i~~D~DGtL~~~~-------------~--~~~~~~~~l~~l~~~-g~~~~~~T~r~~~ 45 (263)
T 1zjj_A 2 VAIIFDMDGVLYRGN-------------R--AIPGVRELIEFLKER-GIPFAFLTNNSTK 45 (263)
T ss_dssp EEEEEECBTTTEETT-------------E--ECTTHHHHHHHHHHH-TCCEEEEESCCSS
T ss_pred eEEEEeCcCceEeCC-------------E--eCccHHHHHHHHHHC-CCeEEEEeCCCCC
Confidence 589999999999531 1 225788899998764 5689999999864
No 100
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=92.10 E-value=0.17 Score=54.42 Aligned_cols=80 Identities=18% Similarity=0.124 Sum_probs=55.3
Q ss_pred hHHHHHHHhhccCeEEEEcccccccCCCCC-CCCCCcccccc--ccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHH
Q 005855 579 EADSIERYLRSNNRLLILGFNATLTEPVDT-PGRRGDQIREM--ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (673)
Q Consensus 579 ~~~~~~~y~~s~~rll~lDyDGTL~~~~~~-p~~~~~~~~~~--~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~ 655 (673)
...++.+....+-++++||.||||++-.-. .|...-.++.. ...+.+++.+.|+.|.+. .-.++|+|++.....++
T Consensus 210 ~~~~~~~l~~~~iK~lv~DvDnTL~~G~l~~dG~~~~~~~dg~g~g~~ypgv~e~L~~Lk~~-Gi~laI~Snn~~~~v~~ 288 (387)
T 3nvb_A 210 TIDIIAAIQGKFKKCLILDLDNTIWGGVVGDDGWENIQVGHGLGIGKAFTEFQEWVKKLKNR-GIIIAVCSKNNEGKAKE 288 (387)
T ss_dssp HHHHHHHHTTCCCCEEEECCBTTTBBSCHHHHCGGGSBCSSSSSTHHHHHHHHHHHHHHHHT-TCEEEEEEESCHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEcCCCCCCCCeecCCCceeEEeccCccccccCHHHHHHHHHHHHC-CCEEEEEcCCCHHHHHH
Confidence 345666777778899999999999984210 00000001101 134578999999999875 57899999999999888
Q ss_pred Hhcc
Q 005855 656 VLDL 659 (673)
Q Consensus 656 ~~~~ 659 (673)
.+..
T Consensus 289 ~l~~ 292 (387)
T 3nvb_A 289 PFER 292 (387)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8864
No 101
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=91.76 E-value=0.12 Score=49.17 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=29.3
Q ss_pred ccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 620 ELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 620 ~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
...+.+.+.++|+.|.+.+...++|+|+++...++.++.
T Consensus 71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~ 109 (193)
T 2i7d_A 71 DLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGE 109 (193)
T ss_dssp TCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHH
T ss_pred cCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHH
Confidence 346789999999999874346899999998765544443
No 102
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=91.46 E-value=0.19 Score=49.44 Aligned_cols=57 Identities=12% Similarity=0.059 Sum_probs=40.5
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~~ 659 (673)
-++++||+||||.... . ....+.+....+++.|.+. ...++++| ||+...+.+.+..
T Consensus 12 ~k~i~fDlDGTLl~s~--~---------~~~~~~~~~~~a~~~l~~~-G~~~~~~t~~~gr~~~~~~~~l~~ 71 (271)
T 2x4d_A 12 VRGVLLDISGVLYDSG--A---------GGGTAIAGSVEAVARLKRS-RLKVRFCTNESAASRAELVGQLQR 71 (271)
T ss_dssp CCEEEECCBTTTEECC--T---------TTCEECTTHHHHHHHHHHS-SSEEEEECCCCSSCHHHHHHHHHH
T ss_pred CCEEEEeCCCeEEecC--C---------CCCccCcCHHHHHHHHHHC-CCcEEEEECCCCCCHHHHHHHHHH
Confidence 4799999999999742 0 0122446777778888765 46788999 9998877666654
No 103
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=91.30 E-value=0.093 Score=50.38 Aligned_cols=64 Identities=16% Similarity=0.250 Sum_probs=38.9
Q ss_pred cCeEEEEcccccccCCC---CCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEPV---DTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~---~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+-++++||+||||+... ...+ . ........-...|+.|.+. .-.++|+||++...++..+....
T Consensus 18 ~ik~vifD~DGtL~~~~~~~~~~~---~----~~~~~~~~d~~~l~~L~~~-g~~~~ivTn~~~~~~~~~l~~lg 84 (191)
T 3n1u_A 18 KIKCLICDVDGVLSDGLLHIDNHG---N----ELKSFHVQDGMGLKLLMAA-GIQVAIITTAQNAVVDHRMEQLG 84 (191)
T ss_dssp TCSEEEECSTTTTBCSCCEECTTC---C----EECCBCHHHHHHHHHHHHT-TCEEEEECSCCSHHHHHHHHHHT
T ss_pred cCCEEEEeCCCCCCCCceeecCCc---h----hhhhccccChHHHHHHHHC-CCeEEEEeCcChHHHHHHHHHcC
Confidence 34789999999999721 1110 0 0011111111147777664 56899999999988877776544
No 104
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=91.10 E-value=0.14 Score=49.87 Aligned_cols=53 Identities=19% Similarity=0.295 Sum_probs=39.6
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
-+++++|.||||........ ......+.+++.++|+.|.+. .-.++|+|+++.
T Consensus 31 ~k~i~~D~DGtl~~~~~y~~------~~~~~~~~~g~~e~L~~L~~~-G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 31 LPALFLDRDGTINVDTDYPS------DPAEIVLRPQMLPAIATANRA-GIPVVVVTNQSG 83 (218)
T ss_dssp CCCEEECSBTTTBCCCSCTT------CGGGCCBCGGGHHHHHHHHHH-TCCEEEEEECHH
T ss_pred CCEEEEeCCCCcCCCCcccC------CcccCeECcCHHHHHHHHHHC-CCEEEEEcCcCC
Confidence 47799999999986522111 013456788999999999874 568999999998
No 105
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=91.05 E-value=0.2 Score=50.57 Aligned_cols=55 Identities=9% Similarity=0.142 Sum_probs=41.2
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcC---CCHHhHHHHhccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSG---SDRNVLDKVLDLV 660 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSG---R~~~~L~~~~~~~ 660 (673)
+-++++||+||||.... .+.+...+.|+.|.+. ...|+++|| |+...+.+.+...
T Consensus 13 ~~k~i~~D~DGtL~~~~---------------~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~r~~~~~~~~l~~l 70 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTYN---------------GLLPGIENTFDYLKAQ-GQDYYIVTNDASRSPEQLADSYHKL 70 (284)
T ss_dssp GCSEEEECSBTTTEETT---------------EECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHHHHT
T ss_pred cCCEEEEcCcCCcCcCC---------------eeChhHHHHHHHHHHC-CCEEEEEeCCCCcCHHHHHHHHHHC
Confidence 35789999999998631 1346788899998875 567888885 8888777777554
No 106
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=90.97 E-value=0.19 Score=51.47 Aligned_cols=53 Identities=13% Similarity=0.137 Sum_probs=40.4
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~~ 659 (673)
-++++||.||||.... .+.+...+.|+.|.+. ...|+++| ||+...+.+.+..
T Consensus 21 ~k~i~~D~DGTL~~~~---------------~~~~~~~~~l~~l~~~-g~~~~~~Tn~~~~~~~~~~~~~~~ 76 (306)
T 2oyc_A 21 AQGVLFDCDGVLWNGE---------------RAVPGAPELLERLARA-GKAALFVSNNSRRARPELALRFAR 76 (306)
T ss_dssp CSEEEECSBTTTEETT---------------EECTTHHHHHHHHHHT-TCEEEEEECCCSSCHHHHHHHHHH
T ss_pred CCEEEECCCCcEecCC---------------ccCcCHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHHHHHh
Confidence 4689999999998531 2346788899998875 56788999 6888887766654
No 107
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=90.59 E-value=0.25 Score=47.64 Aligned_cols=52 Identities=12% Similarity=0.142 Sum_probs=35.5
Q ss_pred eEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhcc
Q 005855 592 RLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLDL 659 (673)
Q Consensus 592 rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~~ 659 (673)
++++||+||||.... .. .++. .+.++.|.+. .-.++++| ||+...+.+.+..
T Consensus 4 k~i~fDlDGTLl~~~-------------~~-~~~~-~~~~~~l~~~-g~~~~~~t~~~g~~~~~~~~~~~~ 58 (250)
T 2c4n_A 4 KNVICDIDGVLMHDN-------------VA-VPGA-AEFLHGIMDK-GLPLVLLTNYPSQTGQDLANRFAT 58 (250)
T ss_dssp CEEEEECBTTTEETT-------------EE-CTTH-HHHHHHHHHT-TCCEEEEESCCSCCHHHHHHHHHH
T ss_pred cEEEEcCcceEEeCC-------------Ee-CcCH-HHHHHHHHHc-CCcEEEEECCCCCCHHHHHHHHHH
Confidence 689999999999742 11 2234 6677777664 34566888 8988777666543
No 108
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=89.95 E-value=0.46 Score=45.82 Aligned_cols=67 Identities=15% Similarity=0.269 Sum_probs=40.0
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+-++++||+||||+.....-..... ........-...|+.|.+. .-.++|+||......+..+....
T Consensus 24 ~ik~vifD~DGtL~d~~~~~~~~~~----~~~~~~~~d~~~l~~L~~~-G~~~~ivT~~~~~~~~~~l~~lg 90 (195)
T 3n07_A 24 QIKLLICDVDGVFSDGLIYMGNQGE----ELKTFHTRDGYGVKALMNA-GIEIAIITGRRSQIVENRMKALG 90 (195)
T ss_dssp TCCEEEECSTTTTSCSCCEECTTSC----EECCCCTTHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHTT
T ss_pred CCCEEEEcCCCCcCCCcEEEccCch----hhheeecccHHHHHHHHHC-CCEEEEEECcCHHHHHHHHHHcC
Confidence 4579999999999973110000000 1111111222347777664 46899999999998887776554
No 109
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=89.05 E-value=0.17 Score=48.33 Aligned_cols=67 Identities=13% Similarity=0.132 Sum_probs=39.5
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
+-++++||+||||+.....-...... .....-.-...|+.|.+. .-.++|+||+....++..+....
T Consensus 18 ~ik~vifD~DGTL~d~~~~~~~~~~~----~~~~~~~~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~~~~lg 84 (189)
T 3mn1_A 18 AIKLAVFDVDGVLTDGRLYFMEDGSE----IKTFNTLDGQGIKMLIAS-GVTTAIISGRKTAIVERRAKSLG 84 (189)
T ss_dssp TCCEEEECSTTTTSCSEEEEETTSCE----EEEEEHHHHHHHHHHHHT-TCEEEEECSSCCHHHHHHHHHHT
T ss_pred hCCEEEEcCCCCcCCccEeeccCCcE----eeeeccccHHHHHHHHHC-CCEEEEEECcChHHHHHHHHHcC
Confidence 45789999999999742100000000 000001111267777664 46899999999988888776544
No 110
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=88.85 E-value=0.084 Score=53.84 Aligned_cols=69 Identities=7% Similarity=0.057 Sum_probs=47.7
Q ss_pred ccCeEEEEcccccccCCCCC-------CCCCCcc------ccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH----H
Q 005855 589 SNNRLLILGFNATLTEPVDT-------PGRRGDQ------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR----N 651 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~-------p~~~~~~------~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~----~ 651 (673)
.++.+++||.||||+..... ...+ +. .....++|-+.+.++|+.|.+. ...|+|||||+. +
T Consensus 56 ~~~~avVfDIDgTlldn~~y~~~~~~~~~~f-~~~~w~~wv~~~~~~~~pG~~ell~~L~~~-G~ki~ivTgR~~~~~r~ 133 (262)
T 3ocu_A 56 GKKKAVVADLNETMLDNSPYAGWQVQNNKPF-DGKDWTRWVDARQSRAVPGAVEFNNYVNSH-NGKVFYVTNRKDSTEKS 133 (262)
T ss_dssp TCEEEEEECCBTTTEECHHHHHHHHHHTCCC-CHHHHHHHHHHTCCEECTTHHHHHHHHHHT-TEEEEEEEEEETTTTHH
T ss_pred CCCeEEEEECCCcCCCCchhhhhhccccccC-CHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCccchHH
Confidence 45678999999999975320 0000 00 0123567889999999999875 578999999965 4
Q ss_pred hHHHHhcc
Q 005855 652 VLDKVLDL 659 (673)
Q Consensus 652 ~L~~~~~~ 659 (673)
...+++..
T Consensus 134 ~T~~~L~~ 141 (262)
T 3ocu_A 134 GTIDDMKR 141 (262)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666655
No 111
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=88.51 E-value=0.62 Score=45.58 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=35.7
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEc---CCCHHhHHHHhc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLS---GSDRNVLDKVLD 658 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViS---GR~~~~L~~~~~ 658 (673)
-++++||+||||.... ...++..++++.|.+. .-.++++| |++...+.+.+.
T Consensus 7 ik~i~fDlDGTLld~~---------------~~~~~~~~ai~~l~~~-G~~~~~~t~~~~~~~~~~~~~l~ 61 (259)
T 2ho4_A 7 LKAVLVDLNGTLHIED---------------AAVPGAQEALKRLRAT-SVMVRFVTNTTKETKKDLLERLK 61 (259)
T ss_dssp CCEEEEESSSSSCC------------------CCTTHHHHHHHHHTS-SCEEEEEECCSSCCHHHHHHHHH
T ss_pred CCEEEEeCcCcEEeCC---------------EeCcCHHHHHHHHHHC-CCeEEEEeCCCCcCHHHHHHHHH
Confidence 4789999999999742 1224667778888775 34678899 676666655554
No 112
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=87.94 E-value=0.19 Score=49.03 Aligned_cols=60 Identities=8% Similarity=0.012 Sum_probs=37.3
Q ss_pred CeEEEEcccccccCCCCC---------CCCCCcccc-----------ccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 591 NRLLILGFNATLTEPVDT---------PGRRGDQIR-----------EMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~---------p~~~~~~~~-----------~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
-++++||+||||+...+. +........ .....|.+.+.+.|+.|.+. .-.++|+|+++.
T Consensus 37 ~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~-G~~l~ivTn~~~ 115 (211)
T 2b82_A 37 PMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRR-GDAIFFVTGRSP 115 (211)
T ss_dssp CCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHH-TCEEEEEECSCC
T ss_pred CCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHC-CCEEEEEcCCcH
Confidence 578999999999974210 000000000 00123566889999999764 468999999975
Q ss_pred H
Q 005855 651 N 651 (673)
Q Consensus 651 ~ 651 (673)
.
T Consensus 116 ~ 116 (211)
T 2b82_A 116 T 116 (211)
T ss_dssp C
T ss_pred H
Confidence 4
No 113
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=87.79 E-value=0.43 Score=46.30 Aligned_cols=38 Identities=21% Similarity=0.312 Sum_probs=30.0
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|.+. ...++|+|+.....++..+...
T Consensus 105 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 142 (240)
T 2no4_A 105 SAYPDAAETLEKLKSA-GYIVAILSNGNDEMLQAALKAS 142 (240)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHhc
Confidence 4558899999999874 5789999999998777766543
No 114
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=87.07 E-value=0.39 Score=48.79 Aligned_cols=71 Identities=8% Similarity=0.097 Sum_probs=46.8
Q ss_pred ccCeEEEEcccccccCCCCCCC-----CC-Ccc------ccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH----Hh
Q 005855 589 SNNRLLILGFNATLTEPVDTPG-----RR-GDQ------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR----NV 652 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~-----~~-~~~------~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~----~~ 652 (673)
.++.+++||.||||+.-...-. .. .+. .....++|.+.++++|+.|.+. ...|+|||||+. +.
T Consensus 56 g~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~-G~~i~ivTgR~~~~~r~~ 134 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNAN-GGTMFFVSNRRDDVEKAG 134 (260)
T ss_dssp --CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHT-TCEEEEEEEEETTTSHHH
T ss_pred CCCCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHC-CCeEEEEeCCCccccHHH
Confidence 3456999999999997531100 00 000 0123567889999999999875 578999999964 46
Q ss_pred HHHHhccc
Q 005855 653 LDKVLDLV 660 (673)
Q Consensus 653 L~~~~~~~ 660 (673)
..+++...
T Consensus 135 T~~~L~~l 142 (260)
T 3pct_A 135 TVDDMKRL 142 (260)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 66666553
No 115
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=86.88 E-value=0.27 Score=48.12 Aligned_cols=67 Identities=15% Similarity=0.366 Sum_probs=39.7
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.-++++||+||||+.....-.......... ...+.+ .|+.|.+. .-.++|+||+.....+..+....
T Consensus 48 ~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~--~~~d~~--~L~~L~~~-G~~l~I~T~~~~~~~~~~l~~lg 114 (211)
T 3ij5_A 48 NIRLLICDVDGVMSDGLIYMGNQGEELKAF--NVRDGY--GIRCLITS-DIDVAIITGRRAKLLEDRANTLG 114 (211)
T ss_dssp TCSEEEECCTTTTSSSEEEEETTSCEEEEE--EHHHHH--HHHHHHHT-TCEEEEECSSCCHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCEECCHHHHhhhhHHHHHh--ccchHH--HHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcC
Confidence 347999999999997421000000001100 011111 67777764 46899999999988887776544
No 116
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=86.66 E-value=0.53 Score=46.66 Aligned_cols=49 Identities=10% Similarity=0.123 Sum_probs=35.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHH
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDK 655 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~ 655 (673)
-++++||+||||.... . +-+++.+.|+.|.+. ...++++|||.....+.
T Consensus 5 ~k~v~fDlDGTL~~~~-------------~--~~~~~~~~l~~l~~~-g~~~~~~t~~~~~~~~~ 53 (264)
T 1yv9_A 5 YQGYLIDLDGTIYLGK-------------E--PIPAGKRFVERLQEK-DLPFLFVTNNTTKSPET 53 (264)
T ss_dssp CCEEEECCBTTTEETT-------------E--ECHHHHHHHHHHHHT-TCCEEEEECCCSSCHHH
T ss_pred CCEEEEeCCCeEEeCC-------------E--ECcCHHHHHHHHHHC-CCeEEEEeCCCCCCHHH
Confidence 4789999999999741 1 125778888888765 45678999987644333
No 117
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=86.59 E-value=1.2 Score=42.78 Aligned_cols=39 Identities=5% Similarity=-0.022 Sum_probs=31.5
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.+.+++.+.|+.|.+. .-.++|+||.....++.++....
T Consensus 92 ~~~~g~~~~l~~l~~~-g~~~~ivS~~~~~~~~~~~~~~g 130 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAA-GDLCALVTATNSFVTAPIARAFG 130 (232)
T ss_dssp GCCHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTT
T ss_pred hcCHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcC
Confidence 4588999999999874 56899999999988877776543
No 118
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=86.52 E-value=0.33 Score=50.58 Aligned_cols=40 Identities=15% Similarity=0.150 Sum_probs=32.6
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..+.+++.+.|+.|.+. .-.++|+||.....++.++....
T Consensus 178 ~~l~pg~~e~L~~Lk~~-G~~v~IvSn~~~~~~~~~l~~lg 217 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAK-GFKTAIISGGLDIFTQRLKARYQ 217 (317)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHHT
T ss_pred CEECcCHHHHHHHHHhC-CCEEEEEeCccHHHHHHHHHHcC
Confidence 46788999999999875 57899999999988777766543
No 119
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=86.05 E-value=0.97 Score=48.88 Aligned_cols=58 Identities=14% Similarity=0.210 Sum_probs=38.6
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
...+++|||+||||..... +.........-..+.+.+.++|+.|.+. .-.++|+|+.+
T Consensus 56 ~~~k~v~fD~DGTL~~~~~--~~~~~~~~~~~~~~~pgv~e~L~~L~~~-G~~l~IvTN~~ 113 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRS--GKVFPTSPSDWRILYPEIPKKLQELAAE-GYKLVIFTNQM 113 (416)
T ss_dssp CCSSEEEECSBTTTEECSS--CSSSCSSTTCCEESCTTHHHHHHHHHHT-TCEEEEEEECH
T ss_pred CCCeEEEEeCCCCccccCC--CccCCCCHHHhhhhcccHHHHHHHHHHC-CCeEEEEeCCc
Confidence 3468999999999985421 1000000111223678999999999875 57899999965
No 120
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=85.24 E-value=7.3 Score=39.95 Aligned_cols=96 Identities=10% Similarity=0.069 Sum_probs=55.7
Q ss_pred ceEEEeec-ccccCChH--HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 364 KVMLGVDR-LDMIKGIP--QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 364 ~iIl~VgR-Ld~~KGi~--~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
.+++..|- ..+.|..+ ...+..+.|.++ ++ .++++|++. +. + .++++...++... -.+
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~----~vvl~g~~~-----e~-~---~~~~i~~~~~~~~----~~~ 242 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GY----QVVLFGSAK-----DH-E---AGNEILAALNTEQ----QAW 242 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TC----EEEECCCGG-----GH-H---HHHHHHTTSCHHH----HTT
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHHC--CC----eEEEEeChh-----hH-H---HHHHHHHhhhhcc----ccc
Confidence 45566665 55677776 666666666543 33 345455432 21 2 2222322211000 013
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhc
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~ 483 (673)
++.+.+..+..++.++++.||++|-+.. -+...|.|.+
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~l~I~~Ds-----g~~HlAaa~g 280 (348)
T 1psw_A 243 CRNLAGETQLDQAVILIAACKAIVTNDS-----GLMHVAAALN 280 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTSSEEEEESS-----HHHHHHHHTT
T ss_pred eEeccCcCCHHHHHHHHHhCCEEEecCC-----HHHHHHHHcC
Confidence 5556788999999999999999998752 3344588874
No 121
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=84.43 E-value=0.87 Score=42.92 Aligned_cols=40 Identities=13% Similarity=0.170 Sum_probs=31.9
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..+.+++.++|+.|.+. .-.++|+|+.....++..+....
T Consensus 69 ~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~ 108 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGR-GYRLGILTRNARELAHVTLEAIG 108 (205)
T ss_dssp EEECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTT
T ss_pred CCCCccHHHHHHHHHhc-CCeEEEEeCCchHHHHHHHHHcC
Confidence 35778999999999874 46899999999988877765543
No 122
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=84.41 E-value=1.2 Score=43.60 Aligned_cols=36 Identities=22% Similarity=0.257 Sum_probs=29.3
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|. ...++|+|+.....++..+...
T Consensus 93 ~~~~~~~~~l~~l~---g~~~~i~t~~~~~~~~~~l~~~ 128 (253)
T 1qq5_A 93 TPYPDAAQCLAELA---PLKRAILSNGAPDMLQALVANA 128 (253)
T ss_dssp CBCTTHHHHHHHHT---TSEEEEEESSCHHHHHHHHHHT
T ss_pred CCCccHHHHHHHHc---CCCEEEEeCcCHHHHHHHHHHC
Confidence 56688999999988 5789999999998877766543
No 123
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=84.35 E-value=0.74 Score=43.36 Aligned_cols=63 Identities=13% Similarity=0.073 Sum_probs=35.0
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
.+-++|++|+||||+...-.-...+..+. .. +-.=...|+.|.+. .-.++|+||+ ...+..+.
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~---~f-~~~D~~~L~~Lk~~-Gi~~~I~Tg~--~~~~~~l~ 69 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEII---SY-DVKDAIGISLLKKS-GIEVRLISER--ACSKQTLS 69 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEE---EE-EHHHHHHHHHHHHT-TCEEEEECSS--CCCHHHHH
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEE---EE-ecCcHHHHHHHHHC-CCEEEEEeCc--HHHHHHHH
Confidence 34589999999999974211000000000 00 00111257777765 4689999999 55555555
No 124
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=83.87 E-value=0.54 Score=44.25 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=28.4
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+++.+ |+.|.+. ..++|+|+.+...++..+...
T Consensus 74 ~~~~~~~~-l~~l~~~--~~~~i~t~~~~~~~~~~l~~~ 109 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI--AEVYALSNGSINEVKQHLERN 109 (201)
T ss_dssp EECGGGGG-HHHHHHH--SEEEEEESSCHHHHHHHHHHT
T ss_pred ccCCChHH-HHHHHhC--CeEEEEeCcCHHHHHHHHHHC
Confidence 45678888 8888765 789999999988777766543
No 125
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=83.24 E-value=0.99 Score=43.19 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=30.1
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|.+. ...++|+|+.....++.++...
T Consensus 95 ~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~ 132 (232)
T 1zrn_A 95 APFSEVPDSLRELKRR-GLKLAILSNGSPQSIDAVVSHA 132 (232)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHT
T ss_pred CCCccHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHhc
Confidence 4568899999999874 5689999999988877776643
No 126
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=83.15 E-value=28 Score=40.83 Aligned_cols=148 Identities=12% Similarity=0.123 Sum_probs=100.2
Q ss_pred CCceEEEeecccccCChHH-HHHHHHHHHH--hC------cC-----ccCceEEEEEEcCCCCChHHHHHHHHHHHHHHH
Q 005855 362 GRKVMLGVDRLDMIKGIPQ-KLLAFEKFLE--EN------SD-----WRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVG 427 (673)
Q Consensus 362 ~~~iIl~VgRLd~~KGi~~-~L~Af~~ll~--~~------P~-----~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~ 427 (673)
+..++++|=|+..-|-... +|.-+.++.+ .+ |+ ++ .+++|..|....++. .-+.+-+.|..++.
T Consensus 599 ~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~-P~~~IFaGKAaP~y~-~aK~iIklI~~va~ 676 (879)
T 1ygp_A 599 DTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYP-RKVSIFGGKSAPGYY-MAKLIIKLINCVAD 676 (879)
T ss_dssp GCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSC-CEEEEEECCCCTTCH-HHHHHHHHHHHHHH
T ss_pred CeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCC-CeEEEEeccCCCCcH-HHHHHHHHHHHHHH
Confidence 4578889999999998877 6777665532 33 54 22 466765554443442 33456667777877
Q ss_pred hhccccCCCCcccEEEeCCCCCHHHHHHHHHHcCEEEEcCCC--cCCChhHHHHHhhccCCCceEEEeCCCCchhhc---
Q 005855 428 RINGRFGTLTAVPIHHLDRSLDFPALCALYAVTDVALVTSLR--DGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL--- 502 (673)
Q Consensus 428 ~IN~~~g~~~~~pV~~~~~~v~~~el~aly~~ADv~vv~Sl~--EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l--- 502 (673)
-||..=...+...|+|+. ..+-.--..++.+|||-..+|++ |.=|..-+=||.- |++.+|..-|+.-++
T Consensus 677 ~iN~Dp~v~~~LKVVFle-nY~VslAe~iipaaDvseqistag~EASGTsnMKfalN-----GaLtlgtlDGanvEi~e~ 750 (879)
T 1ygp_A 677 IVNNDESIEHLLKVVFVA-DYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMN-----GGLIIGTVDGANVEITRE 750 (879)
T ss_dssp HHTTCGGGTTSEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTT-----TCEEEEESCTHHHHHHHH
T ss_pred HhccChhhCCceEEEEeC-CCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHc-----CCeeeecccchhHHHHHH
Confidence 777521112233588775 34555556789999999999984 9999998888875 888999988887655
Q ss_pred -c-CceEEECCCCHHHHH
Q 005855 503 -G-AGAILVNPWNITEVA 518 (673)
Q Consensus 503 -g-~~gllVnP~D~~~lA 518 (673)
| +|++++-. +.+++.
T Consensus 751 vG~eN~fiFG~-~~~ev~ 767 (879)
T 1ygp_A 751 IGEDNVFLFGN-LSENVE 767 (879)
T ss_dssp HCGGGSEEESC-CHHHHH
T ss_pred cCcccEEEccC-CHHHHH
Confidence 5 58888864 344443
No 127
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=83.01 E-value=0.93 Score=43.82 Aligned_cols=71 Identities=18% Similarity=0.247 Sum_probs=49.3
Q ss_pred hccCeEEEEcccccccCCCCCCCCCCcc---------ccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 588 RSNNRLLILGFNATLTEPVDTPGRRGDQ---------IREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 588 ~s~~rll~lDyDGTL~~~~~~p~~~~~~---------~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
..++.+++||.||||+.....|....+. .......+-|.+.+.|+.|.+. -.++|.|...+...+..+.
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~--~~i~I~Tss~~~~a~~vl~ 102 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL--FECVLFTASLAKYADPVAD 102 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH--SEEEEECSSCHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC--CeEEEEcCCCHHHHHHHHH
Confidence 3567889999999999764333211110 0001234568999999999984 8999999999987777665
Q ss_pred cc
Q 005855 659 LV 660 (673)
Q Consensus 659 ~~ 660 (673)
.+
T Consensus 103 ~l 104 (195)
T 2hhl_A 103 LL 104 (195)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 128
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=81.88 E-value=1.4 Score=46.74 Aligned_cols=44 Identities=14% Similarity=0.191 Sum_probs=32.8
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCC
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSD 649 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~ 649 (673)
+.+.|+||.||||.... .+-++..+.|+.|.+. .-.++++|+.+
T Consensus 12 ~~~~~l~D~DGvl~~g~---------------~~~p~a~~~l~~l~~~-g~~~~~vTNn~ 55 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRGK---------------KPIAGASDALKLLNRN-KIPYILLTNGG 55 (352)
T ss_dssp CCEEEEECCBTTTEETT---------------EECTTHHHHHHHHHHT-TCCEEEECSCC
T ss_pred cCCEEEEECCCeeEcCC---------------eeCcCHHHHHHHHHHC-CCEEEEEeCCC
Confidence 67889999999998631 2346788888888875 45677888654
No 129
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=81.72 E-value=1.2 Score=42.47 Aligned_cols=70 Identities=20% Similarity=0.262 Sum_probs=48.8
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccc---------cccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQI---------REMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~---------~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.++.+++||.|+||+.....|....+.. ......+-|.+.+.|+.|++. -.++|.|.......+..+..
T Consensus 13 ~~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~--~~i~I~T~~~~~~a~~vl~~ 90 (181)
T 2ght_A 13 SDKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL--FECVLFTASLAKYADPVADL 90 (181)
T ss_dssp TTSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH--SEEEEECSSCHHHHHHHHHH
T ss_pred CCCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC--CCEEEEcCCCHHHHHHHHHH
Confidence 4578899999999997654442111100 011245678999999999984 89999999999877666554
Q ss_pred c
Q 005855 660 V 660 (673)
Q Consensus 660 ~ 660 (673)
+
T Consensus 91 l 91 (181)
T 2ght_A 91 L 91 (181)
T ss_dssp H
T ss_pred H
Confidence 3
No 130
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=81.72 E-value=2.4 Score=39.38 Aligned_cols=39 Identities=13% Similarity=0.235 Sum_probs=31.7
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
..+.+.+.+.|+.|.+. ...++|+|+.....++..+...
T Consensus 83 ~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 121 (216)
T 2pib_A 83 LKENPGVREALEFVKSK-RIKLALATSTPQREALERLRRL 121 (216)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHT
T ss_pred CCcCcCHHHHHHHHHHC-CCCEEEEeCCcHHhHHHHHHhc
Confidence 56788999999999874 4689999999998887777653
No 131
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=81.47 E-value=0.71 Score=44.08 Aligned_cols=55 Identities=18% Similarity=0.158 Sum_probs=32.9
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHH-hcCCCCeEEEEcCCCHHh-HHHHhcc
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNAL-CHDPKTTIVVLSGSDRNV-LDKVLDL 659 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L-~~d~~n~V~ViSGR~~~~-L~~~~~~ 659 (673)
.++++||+||||..... ...+...+.++++ .......+...+||.... ++..+..
T Consensus 4 ~k~iifDlDGTL~d~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~ 60 (234)
T 2hcf_A 4 RTLVLFDIDGTLLKVES--------------MNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 60 (234)
T ss_dssp CEEEEECCBTTTEEECT--------------HHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHT
T ss_pred ceEEEEcCCCCcccCcc--------------chHHHHHHHHHHHhCCCCccchhhhcCCChHHHHHHHHHH
Confidence 37899999999997421 1234566667763 332223566789998766 5555543
No 132
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=81.23 E-value=2.4 Score=42.19 Aligned_cols=38 Identities=21% Similarity=0.213 Sum_probs=30.4
Q ss_pred cCCChhHHHHHHHHhcCCCC--eEEEEcCCCHHhHHHHhcc
Q 005855 621 LKLHPDLKQPLNALCHDPKT--TIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n--~V~ViSGR~~~~L~~~~~~ 659 (673)
..+.+.+.++|+.|.+. .. .++|+|+.....++..+..
T Consensus 141 ~~~~p~~~~~L~~L~~~-g~~~~l~i~Tn~~~~~~~~~l~~ 180 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQS-GKIDKLWLFTNAYKNHAIRCLRL 180 (282)
T ss_dssp CCCCHHHHHHHHHHHHS-SSCSEEEEECSSCHHHHHHHHHH
T ss_pred cCcChhHHHHHHHHHhC-CCCceEEEEECCChHHHHHHHHh
Confidence 45788999999999875 45 8999999998877766543
No 133
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=80.51 E-value=2.7 Score=39.79 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=30.4
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
..+.+.+.+.|+.|.+. ...++|+|+.+...++..+..
T Consensus 95 ~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~ 132 (230)
T 3um9_A 95 LTPFADVPQALQQLRAA-GLKTAILSNGSRHSIRQVVGN 132 (230)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhC-CCeEEEEeCCCHHHHHHHHHH
Confidence 35678899999999874 468999999999877776654
No 134
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=77.90 E-value=2.3 Score=40.35 Aligned_cols=38 Identities=21% Similarity=0.261 Sum_probs=30.7
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
..+.+.+.+.|+.|.+. ..++|+|+.....++..+...
T Consensus 99 ~~~~~~~~~~l~~l~~~--~~~~i~t~~~~~~~~~~l~~~ 136 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK--YHVGMITDSDTEQAMAFLDAL 136 (234)
T ss_dssp CCBCTTHHHHHHHHTTT--SEEEEEESSCHHHHHHHHHHT
T ss_pred CCcCcCHHHHHHHHHhC--CcEEEEECCCHHHHHHHHHHc
Confidence 45778899999999875 889999999998777766543
No 135
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=77.18 E-value=2.4 Score=40.23 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=30.7
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
..+.+.+.+.|+.|.+. ...++|+|+.+...++..+...
T Consensus 98 ~~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~ 136 (233)
T 3umb_A 98 LSAFPENVPVLRQLREM-GLPLGILSNGNPQMLEIAVKSA 136 (233)
T ss_dssp CEECTTHHHHHHHHHTT-TCCEEEEESSCHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHhC-CCcEEEEeCCCHHHHHHHHHHC
Confidence 34578889999999875 4689999999998887776543
No 136
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=77.04 E-value=3.1 Score=41.96 Aligned_cols=68 Identities=12% Similarity=0.175 Sum_probs=51.1
Q ss_pred HHHHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 581 DSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 581 ~~~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.....|.....+++++|+|+++..... ....+.+++.++|+.|.+. ...++|+||.....++..+...
T Consensus 133 ~~~~~~~~~g~~~i~~~~d~~~~~~~~-----------~~~~~~~g~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l~~~ 200 (287)
T 3a1c_A 133 LALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKRM-GIKVGMITGDNWRSAEAISREL 200 (287)
T ss_dssp HHHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEE-----------eccccchhHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHh
Confidence 445566666678999999998765321 2345678999999999874 4689999999998887776554
No 137
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=70.58 E-value=1.9 Score=41.20 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=30.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhH-HHHHHHHhcCCCCeEEEEcCCCHH
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDL-KQPLNALCHDPKTTIVVLSGSDRN 651 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~-~~~L~~L~~d~~n~V~ViSGR~~~ 651 (673)
-++++||+||||+.... ...+.. .+.++.+.... ..+...+|+...
T Consensus 25 ~k~i~fDlDGTL~d~~~--------------~~~~~~~~~~~~~~g~~~-~~~~~~~g~~~~ 71 (231)
T 3kzx_A 25 PTAVIFDWYNTLIDTSI--------------NIDRTTFYQVLDQMGYKN-IDLDSIPNSTIP 71 (231)
T ss_dssp CSEEEECTBTTTEETTS--------------SCCHHHHHHHHHHTTCCC-CCCTTSCTTTHH
T ss_pred CCEEEECCCCCCcCCch--------------hHHHHHHHHHHHHcCCCH-HHHHHHhCccHH
Confidence 47899999999996421 234566 77777765543 444556666654
No 138
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=64.61 E-value=16 Score=36.62 Aligned_cols=57 Identities=18% Similarity=0.127 Sum_probs=40.2
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
...+++|.|||+......-. ..-..-....|.+.+.++|+.|.+. .-.++|+||+..
T Consensus 159 ~~~i~iD~dgtl~~~~~~~~--~~~~~~~~~~~~~g~~e~L~~L~~~-g~~~~v~T~k~~ 215 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGRGP--YDLEKCDTDVINPMVVELSKMYALM-GYQIVVVSGRES 215 (301)
T ss_dssp CEEEEEETBTTTBCCSSCCT--TCGGGGGGCCBCHHHHHHHHHHHHT-TCEEEEEECSCC
T ss_pred cceEEEeCCCCcccccCCCc--hhhhhccccCCChHHHHHHHHHHHC-CCeEEEEeCCCc
Confidence 46788999999987543210 0111113457789999999999874 468999999984
No 139
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=64.15 E-value=4.3 Score=43.39 Aligned_cols=39 Identities=23% Similarity=0.334 Sum_probs=31.3
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
..+.+++.+.|+.|.+. .-.++|+||.....++..+...
T Consensus 255 ~~~~pg~~e~l~~Lk~~-G~~~~ivS~~~~~~~~~~~~~l 293 (415)
T 3p96_A 255 LELMPGARTTLRTLRRL-GYACGVVSGGFRRIIEPLAEEL 293 (415)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred CccCccHHHHHHHHHHC-CCEEEEEcCCcHHHHHHHHHHc
Confidence 46788999999999875 4689999999888777666544
No 140
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=63.51 E-value=2.9 Score=40.54 Aligned_cols=15 Identities=20% Similarity=0.078 Sum_probs=13.0
Q ss_pred CeEEEEcccccccCC
Q 005855 591 NRLLILGFNATLTEP 605 (673)
Q Consensus 591 ~rll~lDyDGTL~~~ 605 (673)
-++++||+||||...
T Consensus 13 ~k~iifDlDGTL~d~ 27 (251)
T 2pke_A 13 IQLVGFDGDDTLWKS 27 (251)
T ss_dssp CCEEEECCBTTTBCC
T ss_pred eeEEEEeCCCCCccC
Confidence 368999999999974
No 141
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=63.00 E-value=5.6 Score=38.72 Aligned_cols=65 Identities=15% Similarity=0.089 Sum_probs=47.5
Q ss_pred ccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 589 SNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 589 s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.++..++||.|+||+.....+.. . .....-|.+.+.|+.|++ .-.|+|.|.....-.+..+..+.
T Consensus 32 ~~~~tLVLDLDeTLvh~~~~~~~---~---~~v~~RPgl~eFL~~l~~--~yeivI~Tas~~~ya~~vl~~LD 96 (204)
T 3qle_A 32 QRPLTLVITLEDFLVHSEWSQKH---G---WRTAKRPGADYFLGYLSQ--YYEIVLFSSNYMMYSDKIAEKLD 96 (204)
T ss_dssp CCSEEEEEECBTTTEEEEEETTT---E---EEEEECTTHHHHHHHHTT--TEEEEEECSSCHHHHHHHHHHTS
T ss_pred CCCeEEEEeccccEEeeeccccC---c---eeEEeCCCHHHHHHHHHh--CCEEEEEcCCcHHHHHHHHHHhC
Confidence 35678999999999975432210 0 123455799999999984 68999999999987777666544
No 142
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=62.74 E-value=2 Score=40.25 Aligned_cols=48 Identities=10% Similarity=0.010 Sum_probs=27.8
Q ss_pred CeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCC--CeEEEEcCCCHHh
Q 005855 591 NRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPK--TTIVVLSGSDRNV 652 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~--n~V~ViSGR~~~~ 652 (673)
-++++||+||||.... ....+...+.++++..... ..+...+|+....
T Consensus 9 ~k~i~fDlDGTL~~~~--------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~ 58 (226)
T 1te2_A 9 ILAAIFDMDGLLIDSE--------------PLWDRAELDVMASLGVDISRRNELPDTLGLRIDM 58 (226)
T ss_dssp CCEEEECCBTTTBCCH--------------HHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHH
T ss_pred CCEEEECCCCCcCcCH--------------HHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHH
Confidence 4789999999999642 1122455566666543211 1233456777554
No 143
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=60.16 E-value=2.6 Score=39.53 Aligned_cols=14 Identities=7% Similarity=0.501 Sum_probs=12.3
Q ss_pred eEEEEcccccccCC
Q 005855 592 RLLILGFNATLTEP 605 (673)
Q Consensus 592 rll~lDyDGTL~~~ 605 (673)
++++||+||||...
T Consensus 3 k~i~fDlDGTL~d~ 16 (221)
T 2wf7_A 3 KAVLFDLDGVITDT 16 (221)
T ss_dssp CEEEECCBTTTBTH
T ss_pred cEEEECCCCcccCC
Confidence 58999999999963
No 144
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=60.09 E-value=3.5 Score=38.23 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=27.5
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
.+++.+.++|+.|.+. .-.++|+||+.....+..+.
T Consensus 76 ~l~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~ 111 (211)
T 1l7m_A 76 TPTEGAEETIKELKNR-GYVVAVVSGGFDIAVNKIKE 111 (211)
T ss_dssp CBCTTHHHHHHHHHHT-TEEEEEEEEEEHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHC-CCEEEEEcCCcHHHHHHHHH
Confidence 5678899999999874 46789999998876655443
No 145
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=59.95 E-value=2.5 Score=38.88 Aligned_cols=14 Identities=21% Similarity=0.406 Sum_probs=12.4
Q ss_pred eEEEEcccccccCC
Q 005855 592 RLLILGFNATLTEP 605 (673)
Q Consensus 592 rll~lDyDGTL~~~ 605 (673)
++++||+||||...
T Consensus 5 k~i~fDlDGTL~~~ 18 (207)
T 2go7_A 5 TAFIWDLDGTLLDS 18 (207)
T ss_dssp CEEEECTBTTTEEC
T ss_pred cEEEEeCCCccccc
Confidence 68999999999964
No 146
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=59.01 E-value=3.2 Score=39.04 Aligned_cols=15 Identities=13% Similarity=0.173 Sum_probs=13.1
Q ss_pred CeEEEEcccccccCC
Q 005855 591 NRLLILGFNATLTEP 605 (673)
Q Consensus 591 ~rll~lDyDGTL~~~ 605 (673)
-++++||+||||...
T Consensus 8 ik~i~fDlDGTL~~~ 22 (234)
T 3ddh_A 8 IKVIAFDADDTLWSN 22 (234)
T ss_dssp CCEEEECCBTTTBCC
T ss_pred ccEEEEeCCCCCccC
Confidence 378999999999974
No 147
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=58.59 E-value=2.4 Score=39.65 Aligned_cols=15 Identities=20% Similarity=0.496 Sum_probs=13.0
Q ss_pred CeEEEEcccccccCC
Q 005855 591 NRLLILGFNATLTEP 605 (673)
Q Consensus 591 ~rll~lDyDGTL~~~ 605 (673)
-++++||+||||...
T Consensus 6 ~k~v~fDlDGTL~d~ 20 (225)
T 3d6j_A 6 YTVYLFDFDYTLADS 20 (225)
T ss_dssp CSEEEECCBTTTEEC
T ss_pred CCEEEEeCCCCCCCC
Confidence 468999999999964
No 148
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=58.19 E-value=3.9 Score=38.32 Aligned_cols=39 Identities=23% Similarity=0.240 Sum_probs=31.0
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
..+.+++.+.|+.|.+. .-.++|+|+.....++..+...
T Consensus 74 ~~~~~~~~~~l~~l~~~-g~~~~i~S~~~~~~~~~~l~~~ 112 (217)
T 3m1y_A 74 LPLFEGALELVSALKEK-NYKVVCFSGGFDLATNHYRDLL 112 (217)
T ss_dssp CCBCBTHHHHHHHHHTT-TEEEEEEEEEEHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHC-CCEEEEEcCCchhHHHHHHHHc
Confidence 45788999999999864 5689999999888777666553
No 149
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=57.59 E-value=11 Score=40.14 Aligned_cols=76 Identities=14% Similarity=0.232 Sum_probs=50.8
Q ss_pred HHHHHhhccCeEEEEcccccccCCCCCCC---------CCC---------ccc--------cccccCCChhHHHHHHHHh
Q 005855 582 SIERYLRSNNRLLILGFNATLTEPVDTPG---------RRG---------DQI--------REMELKLHPDLKQPLNALC 635 (673)
Q Consensus 582 ~~~~y~~s~~rll~lDyDGTL~~~~~~p~---------~~~---------~~~--------~~~~~~p~~~~~~~L~~L~ 635 (673)
-.++....++..++||.||||+...-.|- ... -+. .......-|.+.+.|+.|+
T Consensus 9 ~~~rl~~~~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~ 88 (372)
T 3ef0_A 9 NVKRLRQEKRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS 88 (372)
T ss_dssp HHHHHHHHTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh
Confidence 34566777888999999999997643331 000 000 0112344578999999999
Q ss_pred cCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 636 HDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 636 ~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
. .-.|+|.|.....-.+..+..
T Consensus 89 ~--~yeivI~Tas~~~yA~~vl~~ 110 (372)
T 3ef0_A 89 E--LYELHIYTMGTKAYAKEVAKI 110 (372)
T ss_dssp T--TEEEEEECSSCHHHHHHHHHH
T ss_pred c--CcEEEEEeCCcHHHHHHHHHH
Confidence 4 688999999998766555544
No 150
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=56.81 E-value=3.4 Score=39.02 Aligned_cols=14 Identities=21% Similarity=0.283 Sum_probs=12.4
Q ss_pred eEEEEcccccccCC
Q 005855 592 RLLILGFNATLTEP 605 (673)
Q Consensus 592 rll~lDyDGTL~~~ 605 (673)
++++||+||||...
T Consensus 5 k~i~fDlDGTL~d~ 18 (235)
T 2om6_A 5 KLVTFDVWNTLLDL 18 (235)
T ss_dssp CEEEECCBTTTBCH
T ss_pred eEEEEeCCCCCCCc
Confidence 68999999999974
No 151
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=56.78 E-value=6.1 Score=42.44 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=26.2
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCC------CHHhHHHH
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGS------DRNVLDKV 656 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR------~~~~L~~~ 656 (673)
.+.+++.++|+.|.+. .-.++|+|+. ....++..
T Consensus 100 ~~~~~~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~~~~~~~ 139 (555)
T 3i28_A 100 KINRPMLQAALMLRKK-GFTTAILTNTWLDDRAERDGLAQL 139 (555)
T ss_dssp EECHHHHHHHHHHHHT-TCEEEEEECCCCCCSTTHHHHHHH
T ss_pred CcChhHHHHHHHHHHC-CCEEEEEeCCCccccchhhHHHHH
Confidence 5678899999999874 4689999997 55566554
No 152
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=54.65 E-value=4.3 Score=37.18 Aligned_cols=35 Identities=11% Similarity=0.196 Sum_probs=25.5
Q ss_pred CChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 623 p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
+.+.+.+.|+.|.+. ...++|+|+... .++..+..
T Consensus 83 ~~~~~~~~l~~l~~~-g~~~~i~t~~~~-~~~~~l~~ 117 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQ-GGRHFLVSHRND-QVLEILEK 117 (190)
T ss_dssp BCTTHHHHHHHHHHT-TCEEEEECSSCT-HHHHHHHH
T ss_pred cCcCHHHHHHHHHHC-CCcEEEEECCcH-HHHHHHHH
Confidence 678899999999775 468899998764 45555443
No 153
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=54.51 E-value=13 Score=38.76 Aligned_cols=60 Identities=18% Similarity=0.264 Sum_probs=44.6
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
.+.+|+||.||||+.....+. . .....-|.+.+.|+.++. .-.|+|-|.....-.+..+.
T Consensus 139 ~k~tLVLDLDeTLvh~~~~~~----~---~~~~~RP~l~eFL~~l~~--~yeivIfTas~~~ya~~vld 198 (320)
T 3shq_A 139 GKKLLVLDIDYTLFDHRSPAE----T---GTELMRPYLHEFLTSAYE--DYDIVIWSATSMRWIEEKMR 198 (320)
T ss_dssp TCEEEEECCBTTTBCSSSCCS----S---HHHHBCTTHHHHHHHHHH--HEEEEEECSSCHHHHHHHHH
T ss_pred CCcEEEEeccccEEcccccCC----C---cceEeCCCHHHHHHHHHh--CCEEEEEcCCcHHHHHHHHH
Confidence 568899999999998653221 0 122344789999999996 58999999999976666554
No 154
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=54.39 E-value=4.4 Score=37.60 Aligned_cols=13 Identities=15% Similarity=0.268 Sum_probs=0.0
Q ss_pred eEEEEcccccccC
Q 005855 592 RLLILGFNATLTE 604 (673)
Q Consensus 592 rll~lDyDGTL~~ 604 (673)
++++||+||||+.
T Consensus 5 k~viFDlDGTL~d 17 (200)
T 3cnh_A 5 KALFWDIGGVLLT 17 (200)
T ss_dssp CEEEECCBTTTBC
T ss_pred eEEEEeCCCeeEC
No 155
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=53.82 E-value=5.1 Score=37.71 Aligned_cols=32 Identities=9% Similarity=0.174 Sum_probs=25.7
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHh
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNV 652 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~ 652 (673)
..+.+.+.++|+.|.+.+...++|+|+.+...
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~ 105 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMF 105 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCC
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccch
Confidence 46778999999999874346899999988753
No 156
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=53.79 E-value=4.5 Score=37.33 Aligned_cols=39 Identities=21% Similarity=0.178 Sum_probs=31.7
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.+.+++.+.|+.|.+. ...++|+|+.....++..+....
T Consensus 89 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~~ 127 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQ-GLEIGLASSSVKADIFRALEENR 127 (214)
T ss_dssp HBCTTHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHTT
T ss_pred CcCchHHHHHHHHHHC-CCCEEEEeCCcHHHHHHHHHHcC
Confidence 5778899999999875 47899999999988887776543
No 157
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=53.08 E-value=15 Score=37.49 Aligned_cols=33 Identities=6% Similarity=0.090 Sum_probs=26.3
Q ss_pred HHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEE
Q 005855 451 PALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLIL 492 (673)
Q Consensus 451 ~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVl 492 (673)
+++..+|+.||++|.+ - |.++.|+++++ .|.|+
T Consensus 217 ~~m~~~m~~aDlvI~~---g--G~T~~E~~~~g----~P~i~ 249 (282)
T 3hbm_A 217 ENIAKLMNESNKLIIS---A--SSLVNEALLLK----ANFKA 249 (282)
T ss_dssp SCHHHHHHTEEEEEEE---S--SHHHHHHHHTT----CCEEE
T ss_pred HHHHHHHHHCCEEEEC---C--cHHHHHHHHcC----CCEEE
Confidence 5789999999999883 2 47999999995 55544
No 158
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=52.99 E-value=5 Score=37.24 Aligned_cols=37 Identities=19% Similarity=0.238 Sum_probs=29.0
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+.+.+.+.|+.|.+. .-.++|+|+.....++..+..
T Consensus 82 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~~~~ 118 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNK-GFEIWIFSGGLSESIQPFADY 118 (219)
T ss_dssp TBCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHH
T ss_pred cCChhHHHHHHHHHHC-CCeEEEEcCCcHHHHHHHHHH
Confidence 3678899999999775 468999999988777666544
No 159
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=51.76 E-value=7 Score=37.24 Aligned_cols=37 Identities=22% Similarity=0.252 Sum_probs=25.9
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
..+.+++.+.|+.|.+. ...++|+|+.....++..+.
T Consensus 107 ~~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~ 143 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSE-GLTPMVVTGSGQTSLLDRLN 143 (247)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEECSCC---CHHHHH
T ss_pred CCCCCCHHHHHHHHHHc-CCcEEEEcCCchHHHHHHHH
Confidence 35678899999999874 46899999988775555543
No 160
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=51.70 E-value=5.8 Score=38.09 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=29.0
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
..+.+.+.+.|+.|.+.. .++|+|+.+...++..+..
T Consensus 95 ~~~~~g~~~~l~~l~~~g--~~~i~Tn~~~~~~~~~l~~ 131 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG--PTVILSDGDVVFQPRKIAR 131 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS--CEEEEEECCSSHHHHHHHH
T ss_pred CCcCccHHHHHHHHHhCC--CEEEEeCCCHHHHHHHHHH
Confidence 356789999999998753 7899999988766666544
No 161
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=51.16 E-value=5.2 Score=37.63 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=30.3
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|.+. .-.++|+|+.....++..+...
T Consensus 86 ~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~ 123 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDY-GFHLVVATSKPTVFSKQILEHF 123 (226)
T ss_dssp CBCTTHHHHHHHHHHH-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHHh
Confidence 5778999999999874 4689999999888777776543
No 162
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=50.90 E-value=5.3 Score=37.87 Aligned_cols=27 Identities=26% Similarity=0.300 Sum_probs=21.9
Q ss_pred CChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 623 LHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 623 p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
+.+.+.+.|+.|.+. ...++|+|+.+.
T Consensus 93 ~~~~~~~~l~~l~~~-g~~~~i~t~~~~ 119 (233)
T 3nas_A 93 LLPGIGRLLCQLKNE-NIKIGLASSSRN 119 (233)
T ss_dssp SCTTHHHHHHHHHHT-TCEEEECCSCTT
T ss_pred cCcCHHHHHHHHHHC-CCcEEEEcCchh
Confidence 678899999999875 468899998754
No 163
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=50.56 E-value=5.7 Score=37.13 Aligned_cols=38 Identities=16% Similarity=0.112 Sum_probs=31.3
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
..+.+++.+.|+.|.+. ..++|+|+.....++.++...
T Consensus 68 ~~~~~g~~~~l~~l~~~--~~~~i~s~~~~~~~~~~l~~~ 105 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRER--FQVVILSDTFYEFSQPLMRQL 105 (206)
T ss_dssp CCCCTTHHHHHHHHHTT--SEEEEEEEEEHHHHHHHHHHT
T ss_pred cCCCccHHHHHHHHHhc--CcEEEEECChHHHHHHHHHHc
Confidence 35678999999999875 799999999988877776653
No 164
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=50.29 E-value=5.7 Score=37.37 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=23.1
Q ss_pred CChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 623 LHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 623 p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
+.+.+.+.|+.|.. .++|+|+.....++..+...
T Consensus 88 ~~~~~~~~l~~l~~----~~~i~s~~~~~~~~~~l~~~ 121 (229)
T 2fdr_A 88 IIDGVKFALSRLTT----PRCICSNSSSHRLDMMLTKV 121 (229)
T ss_dssp BCTTHHHHHHHCCS----CEEEEESSCHHHHHHHHHHT
T ss_pred cCcCHHHHHHHhCC----CEEEEECCChhHHHHHHHhC
Confidence 44556666666542 88999999888777666543
No 165
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=50.07 E-value=4.7 Score=37.45 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=25.4
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhH
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVL 653 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L 653 (673)
..+.+++.+.|+.|.+. ...++|+|+.+...+
T Consensus 90 ~~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~ 121 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQ-GHRVVVLSNTNRLHT 121 (206)
T ss_dssp EEECHHHHHHHHHHHHT-TCEEEEEECCCCCTT
T ss_pred cccCccHHHHHHHHHHC-CCeEEEEECCChHHH
Confidence 35678999999999864 578999999876553
No 166
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=49.78 E-value=5.6 Score=37.76 Aligned_cols=40 Identities=18% Similarity=0.375 Sum_probs=32.2
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..+.+++.++|+.|.+. .-.++|+|+......+..+....
T Consensus 85 ~~~~~g~~~~l~~L~~~-g~~~~i~T~~~~~~~~~~l~~~g 124 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQER-NVQVFLISGGFRSIVEHVASKLN 124 (225)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTT
T ss_pred CCCCccHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHHHcC
Confidence 45788999999999875 56899999999988777766543
No 167
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=49.73 E-value=6.5 Score=37.36 Aligned_cols=38 Identities=13% Similarity=0.201 Sum_probs=29.9
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+++.+.|+.|.+. .-.++|+|+.....++..+...
T Consensus 104 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 141 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAA-GFRLAMATSKVEKAARAIAELT 141 (237)
T ss_dssp GBCTTHHHHHHHHHHT-TEEEEEECSSCHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHhC-CCcEEEEcCCChHHHHHHHHHc
Confidence 4678889999999874 4689999999988777666543
No 168
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=49.57 E-value=5.7 Score=37.54 Aligned_cols=38 Identities=11% Similarity=0.023 Sum_probs=30.6
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
..+.+.+.+.|+.|.+. ..++|+|+.....++..+...
T Consensus 102 ~~~~~~~~~~l~~l~~~--~~~~i~t~~~~~~~~~~l~~~ 139 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ--FDLYIVTNGVSHTQYKRLRDS 139 (238)
T ss_dssp CCBCTTHHHHHHHHHTT--SEEEEEECSCHHHHHHHHHHT
T ss_pred CCCCccHHHHHHHHHhc--CeEEEEeCCCHHHHHHHHHHc
Confidence 35778999999999875 889999999988777666543
No 169
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=49.48 E-value=6.1 Score=36.23 Aligned_cols=35 Identities=23% Similarity=0.446 Sum_probs=27.3
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHH
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKV 656 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~ 656 (673)
..+.+.+.+.|+.|.+. .-.++|+|+.....++..
T Consensus 78 ~~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~ 112 (201)
T 4ap9_A 78 VNVSPEARELVETLREK-GFKVVLISGSFEEVLEPF 112 (201)
T ss_dssp CCCCHHHHHHHHHHHHT-TCEEEEEEEEETTTSGGG
T ss_pred CCCChhHHHHHHHHHHC-CCeEEEEeCCcHHHHHHH
Confidence 36788999999999875 468999998877655544
No 170
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=49.41 E-value=5.7 Score=37.53 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=29.6
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
..+.+++.+.|+.|. ..-.++|+|+.....++..+..
T Consensus 106 ~~~~~~~~~~l~~l~--~g~~~~i~sn~~~~~~~~~l~~ 142 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA--PQYNLYILSNGFRELQSRKMRS 142 (240)
T ss_dssp CCBSTTHHHHHHHHT--TTSEEEEEECSCHHHHHHHHHH
T ss_pred CCcCccHHHHHHHHH--cCCeEEEEeCCchHHHHHHHHH
Confidence 456788999999998 3578999999998877766654
No 171
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=49.03 E-value=4.9 Score=37.55 Aligned_cols=13 Identities=15% Similarity=0.422 Sum_probs=0.0
Q ss_pred eEEEEcccccccC
Q 005855 592 RLLILGFNATLTE 604 (673)
Q Consensus 592 rll~lDyDGTL~~ 604 (673)
++++||+||||+.
T Consensus 6 k~iiFDlDGTL~d 18 (211)
T 2i6x_A 6 RNIVFDLGGVLIH 18 (211)
T ss_dssp SEEEECSBTTTEE
T ss_pred eEEEEeCCCeeEe
No 172
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=48.29 E-value=6.1 Score=37.90 Aligned_cols=37 Identities=22% Similarity=0.207 Sum_probs=28.1
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
..+.+.+.+.|+.|.+. ...++|+|+.....++..+.
T Consensus 108 ~~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~ 144 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSE-GLTPMVVTGSGQLSLLERLE 144 (243)
T ss_dssp CCBCTTHHHHHHHHHHT-TCEEEEECCCCCHHHHTTHH
T ss_pred CCCCCCHHHHHHHHHHc-CCcEEEEeCCcHHHHHHHHH
Confidence 35678889999998874 46899999998776655553
No 173
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=48.21 E-value=7.2 Score=37.64 Aligned_cols=37 Identities=14% Similarity=0.229 Sum_probs=30.8
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
..+.+++.+.|+.|.+. .-.++|+|+.....++.++.
T Consensus 76 ~~~~pg~~~~l~~L~~~-g~~~~ivS~~~~~~~~~~l~ 112 (236)
T 2fea_A 76 AKIREGFREFVAFINEH-EIPFYVISGGMDFFVYPLLE 112 (236)
T ss_dssp CCBCTTHHHHHHHHHHH-TCCEEEEEEEEHHHHHHHHT
T ss_pred CCCCccHHHHHHHHHhC-CCeEEEEeCCcHHHHHHHHh
Confidence 46788999999999864 46899999999988888776
No 174
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=48.00 E-value=6.2 Score=37.19 Aligned_cols=36 Identities=28% Similarity=0.297 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+.+.+.+.|+.|.+ ...++|+|+.+...++..+..
T Consensus 99 ~~~~~~~~~l~~l~~--~~~~~i~tn~~~~~~~~~l~~ 134 (240)
T 3smv_A 99 PAFPDTVEALQYLKK--HYKLVILSNIDRNEFKLSNAK 134 (240)
T ss_dssp CBCTTHHHHHHHHHH--HSEEEEEESSCHHHHHHHHTT
T ss_pred CCCCcHHHHHHHHHh--CCeEEEEeCCChhHHHHHHHh
Confidence 567889999999987 478999999999888777655
No 175
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=47.65 E-value=6.6 Score=40.47 Aligned_cols=40 Identities=3% Similarity=-0.052 Sum_probs=26.1
Q ss_pred cCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 590 NNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 590 ~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
.-++++||+||||+... . . +.|.++... ...++++|||..
T Consensus 20 ~~kli~fDlDGTLld~~-------------~------~-~~l~~~~~~-g~~~~~~tGR~~ 59 (332)
T 1y8a_A 20 QGHMFFTDWEGPWILTD-------------F------A-LELCMAVFN-NARFFSNLSEYD 59 (332)
T ss_dssp CCCEEEECSBTTTBCCC-------------H------H-HHHHHHHHC-CHHHHHHHHHHH
T ss_pred CceEEEEECcCCCcCcc-------------H------H-HHHHHHHHC-CCEEEEEcCCCc
Confidence 35799999999999741 1 1 344444443 245667788877
No 176
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=47.07 E-value=6.6 Score=38.22 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=25.9
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
.+.+.+.+.|+.|.+. .-.++|+|+.....++..+.
T Consensus 103 ~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~ 138 (267)
T 1swv_A 103 SPINGVKEVIASLRER-GIKIGSTTGYTREMMDIVAK 138 (267)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEBCSSCHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHH
Confidence 4567778888888764 46788999998876665543
No 177
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=47.01 E-value=6.9 Score=36.90 Aligned_cols=28 Identities=18% Similarity=0.465 Sum_probs=22.6
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHH
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRN 651 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~ 651 (673)
.+.+.+.+.|+.|.+. ..++|+|+.+..
T Consensus 105 ~~~~~~~~~l~~l~~~--~~~~i~t~~~~~ 132 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT--FTLGVITNGNAD 132 (230)
T ss_dssp CBCTTHHHHHHHHHTT--SEEEEEESSCCC
T ss_pred ccCcCHHHHHHHHHhC--CeEEEEECCchh
Confidence 4678889999999874 788999987754
No 178
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=46.62 E-value=6.8 Score=37.33 Aligned_cols=31 Identities=13% Similarity=0.046 Sum_probs=26.5
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHH
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLD 654 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~ 654 (673)
.+.+++.++|+.|.+. ..++|+|+.+....+
T Consensus 112 ~~~~~~~~~l~~l~~~--~~~~i~Sn~~~~~~~ 142 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK--YVVYLLSNTNDIHWK 142 (229)
T ss_dssp CCCHHHHHHHHHHTTT--SEEEEEECCCHHHHH
T ss_pred hccHHHHHHHHHHHhc--CcEEEEECCChHHHH
Confidence 4568999999999874 889999999998776
No 179
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=46.34 E-value=6.7 Score=37.80 Aligned_cols=37 Identities=14% Similarity=0.139 Sum_probs=29.3
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
..+.+.+.+.|+.|.+. ...++|+|+.....++..+.
T Consensus 111 ~~~~~~~~~~l~~l~~~-g~~~~i~sn~~~~~~~~~l~ 147 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKH-GIPFALATSSRSASFDMKTS 147 (250)
T ss_dssp CCBCTTHHHHHHHHHHT-TCCEEEECSCCHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHhC-CCcEEEEeCCCHHHHHHHHH
Confidence 45788899999999874 46899999999887666553
No 180
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=46.33 E-value=6.9 Score=38.04 Aligned_cols=37 Identities=16% Similarity=0.187 Sum_probs=29.2
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+.+.+.+.|+.|.+. ...++|+|+.....++..+..
T Consensus 111 ~~~~~~~~~l~~l~~~-g~~~~i~tn~~~~~~~~~l~~ 147 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQ-GIKVGGNTGYGPGMMAPALIA 147 (277)
T ss_dssp CBCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHH
T ss_pred ccCcCHHHHHHHHHHc-CCeEEEEeCCchHHHHHHHHh
Confidence 5678888999999874 468999999998777666543
No 181
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=46.12 E-value=1.2e+02 Score=26.24 Aligned_cols=78 Identities=10% Similarity=0.143 Sum_probs=45.8
Q ss_pred CHHHHHHHHH--HcCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYA--VTDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~--~ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...++. ..|++++-... +.-|+-.++.+......-.++++|........ + |..+++..|.+.+++..+
T Consensus 35 ~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~ 114 (155)
T 1qkk_A 35 SATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQS 114 (155)
T ss_dssp CHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCChHHHHHHHhcCCCeEEeCCCCHHHHHHH
Confidence 3444444433 24776654333 33345556655433222234556655432221 1 677899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 115 i~~~~~ 120 (155)
T 1qkk_A 115 ARRAEE 120 (155)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
No 182
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=46.11 E-value=7 Score=37.27 Aligned_cols=37 Identities=22% Similarity=0.174 Sum_probs=29.4
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|.+. ..++|+|+.+...++..+...
T Consensus 116 ~~~~~~~~~l~~l~~~--~~~~i~t~~~~~~~~~~l~~~ 152 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE--YIIGPLSNGNTSLLLDMAKNA 152 (254)
T ss_dssp CBCTTHHHHHHHHHHH--SEEEECSSSCHHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHHhC--CeEEEEeCCCHHHHHHHHHhC
Confidence 4568888999998873 789999999988777766554
No 183
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=45.88 E-value=1.1e+02 Score=26.31 Aligned_cols=78 Identities=14% Similarity=0.123 Sum_probs=47.8
Q ss_pred CHHHHHHHHHH--c-CEEEEcC-CCcCCChhHHHHHhhccCCCceEEEeCCCCchh---hc--c-CceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV--T-DVALVTS-LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--G-AGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~--A-Dv~vv~S-l~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~---~l--g-~~gllVnP~D~~~lA 518 (673)
+.++...++.. . |++++-. +-+.-|+-.++.+-.......++++|....... .+ | ..+++..|.+.+++.
T Consensus 35 ~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~ 114 (151)
T 3kcn_A 35 SGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLNKPCQMSDIK 114 (151)
T ss_dssp SHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCeeEEEcCCCCHHHHH
Confidence 44555555543 2 7777643 334445666666554322223455665443322 22 5 568999999999999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
++|..++.
T Consensus 115 ~~i~~~l~ 122 (151)
T 3kcn_A 115 AAINAGIK 122 (151)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999985
No 184
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=45.24 E-value=7.3 Score=37.36 Aligned_cols=38 Identities=8% Similarity=-0.017 Sum_probs=28.1
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|.+. .-.++|+|+......+..+...
T Consensus 94 ~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~ 131 (241)
T 2hoq_A 94 REVPGARKVLIRLKEL-GYELGIITDGNPVKQWEKILRL 131 (241)
T ss_dssp CBCTTHHHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHT
T ss_pred CCCccHHHHHHHHHHC-CCEEEEEECCCchhHHHHHHHc
Confidence 4678888889988764 4578899998887766655443
No 185
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=45.24 E-value=6.6 Score=36.94 Aligned_cols=39 Identities=10% Similarity=0.112 Sum_probs=31.4
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
..+.+.+.+.|+.|.+. .-.++|+|+.....++..+...
T Consensus 90 ~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 128 (233)
T 3s6j_A 90 IIALPGAVELLETLDKE-NLKWCIATSGGIDTATINLKAL 128 (233)
T ss_dssp CEECTTHHHHHHHHHHT-TCCEEEECSSCHHHHHHHHHTT
T ss_pred CccCCCHHHHHHHHHHC-CCeEEEEeCCchhhHHHHHHhc
Confidence 45678899999999874 4689999999998888777654
No 186
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=45.00 E-value=1.8e+02 Score=29.80 Aligned_cols=92 Identities=10% Similarity=0.047 Sum_probs=52.0
Q ss_pred CceEEEeecccccCChH--HHHHHHHHHHHhCcCccCceEEEEEEcCCCCChHHHHHHHHHHHHHHHhhccccCCCCccc
Q 005855 363 RKVMLGVDRLDMIKGIP--QKLLAFEKFLEENSDWRGKVVLLQIAVPTRTDVPEYQRLTSQVHEIVGRINGRFGTLTAVP 440 (673)
Q Consensus 363 ~~iIl~VgRLd~~KGi~--~~L~Af~~ll~~~P~~~~~v~Lvqvg~psr~~~~ey~~l~~~l~~lv~~IN~~~g~~~~~p 440 (673)
+.+++..|--.+.|..+ ...+..+.+.++ ++ .++++|+|. + . +.++++++.+.. +
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~----~vvl~g~~~--e---~----~~~~~i~~~~~~--------~ 242 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GY----KTVFFGGPM--D---L----EMVQPVVEQMET--------K 242 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TC----EEEECCCTT--T---H----HHHHHHHHTCSS--------C
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CC----eEEEEeCcc--h---H----HHHHHHHHhccc--------c
Confidence 34455666444566663 455555555544 23 234455432 2 1 123333333221 2
Q ss_pred EEEeCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhh
Q 005855 441 IHHLDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVAC 482 (673)
Q Consensus 441 V~~~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~ 482 (673)
++.+.+..+-.|+.++++.||++|-+-. |.+-+ |.|.
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~~~i~~Ds----G~~Hl-Aaa~ 279 (349)
T 3tov_A 243 PIVATGKFQLGPLAAAMNRCNLLITNDS----GPMHV-GISQ 279 (349)
T ss_dssp CEECTTCCCHHHHHHHHHTCSEEEEESS----HHHHH-HHTT
T ss_pred cEEeeCCCCHHHHHHHHHhCCEEEECCC----CHHHH-HHhc
Confidence 3446788999999999999999997621 45555 6676
No 187
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=44.92 E-value=7.8 Score=35.70 Aligned_cols=26 Identities=15% Similarity=0.319 Sum_probs=22.7
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCC
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGS 648 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR 648 (673)
.+|-|.+.++|+.|.+ +-.++|+|++
T Consensus 68 ~~~~pg~~e~L~~L~~--~~~~~i~T~~ 93 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNE--HYDIYIATAA 93 (180)
T ss_dssp CCBCTTHHHHHHHHTT--TSEEEEEECC
T ss_pred CCCCcCHHHHHHHHHh--cCCEEEEeCC
Confidence 4678999999999987 3899999998
No 188
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=44.72 E-value=1.1e+02 Score=26.69 Aligned_cols=78 Identities=15% Similarity=0.169 Sum_probs=46.8
Q ss_pred CHHHHHHHHHH----cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV----TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~----ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA 518 (673)
+.++...++.. .|++++--. -+.-|+-.++.+-.....-.++++|........ + |..+++..|.+.+++.
T Consensus 69 ~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~ 148 (157)
T 3hzh_A 69 DGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVL 148 (157)
T ss_dssp SHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHH
Confidence 34455554443 366665433 333455556655443222345566655433322 1 6778999999999999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
++|..+|.
T Consensus 149 ~~i~~~l~ 156 (157)
T 3hzh_A 149 QRVMSVFV 156 (157)
T ss_dssp HHHHHTTC
T ss_pred HHHHHHhc
Confidence 99998874
No 189
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=43.69 E-value=7.2 Score=37.39 Aligned_cols=37 Identities=22% Similarity=0.233 Sum_probs=29.2
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|.+. ..++|+|+.....++..+...
T Consensus 120 ~~~~~~~~~l~~l~~~--~~~~i~s~~~~~~~~~~l~~~ 156 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD--YWLAALSNGNTALMLDVARHA 156 (254)
T ss_dssp EECTTHHHHHHHHTTT--SEEEECCSSCHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHhc--CeEEEEeCCCHHHHHHHHHHc
Confidence 3567889999999773 789999999988777766543
No 190
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=43.04 E-value=7.5 Score=36.24 Aligned_cols=12 Identities=33% Similarity=0.600 Sum_probs=0.0
Q ss_pred eEEEEccccccc
Q 005855 592 RLLILGFNATLT 603 (673)
Q Consensus 592 rll~lDyDGTL~ 603 (673)
++++||+||||.
T Consensus 5 k~iifDlDGTL~ 16 (209)
T 2hdo_A 5 QALMFDIDGTLT 16 (209)
T ss_dssp SEEEECSBTTTE
T ss_pred cEEEEcCCCCCc
No 191
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=42.92 E-value=85 Score=26.69 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=48.8
Q ss_pred CHHHHHHHHH----HcCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchh---hc--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYA----VTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~----~ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~---~l--g~~gllVnP~D~~~lA 518 (673)
+.++...++. ..|++++-.. -+.-|+-.++.+-.......++++|....... .+ |..+++..|.+.+++.
T Consensus 35 ~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~ 114 (143)
T 3jte_A 35 SSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLS 114 (143)
T ss_dssp SHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHhCcceeEeCCCCHHHHH
Confidence 4455555555 4577766543 34445566666554322233456666554322 22 6778999999999999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
.+|..++.
T Consensus 115 ~~l~~~~~ 122 (143)
T 3jte_A 115 IAINNAIN 122 (143)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999985
No 192
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=42.38 E-value=8.1 Score=37.41 Aligned_cols=39 Identities=21% Similarity=0.184 Sum_probs=30.0
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
..+.+++.++|+.|.+. ...++|+|+.....++..+...
T Consensus 109 ~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 147 (259)
T 4eek_A 109 VTAIEGAAETLRALRAA-GVPFAIGSNSERGRLHLKLRVA 147 (259)
T ss_dssp CEECTTHHHHHHHHHHH-TCCEEEECSSCHHHHHHHHHHT
T ss_pred CCcCccHHHHHHHHHHC-CCeEEEEeCCCHHHHHHHHHhc
Confidence 35677888999998764 4689999999998777766543
No 193
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=42.31 E-value=7.2 Score=36.76 Aligned_cols=36 Identities=14% Similarity=0.259 Sum_probs=27.6
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+.+.+.+.|+.|.+ ...++|+|+.+....+..+..
T Consensus 84 ~~~~g~~~~l~~L~~--~~~l~i~T~~~~~~~~~~l~~ 119 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS--SYPLYITTTKDTSTAQDMAKN 119 (210)
T ss_dssp EECTTHHHHHHHHHT--TSCEEEEEEEEHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHc--CCeEEEEeCCCHHHHHHHHHh
Confidence 456788899999876 678899999888766665544
No 194
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=41.63 E-value=8.1 Score=36.76 Aligned_cols=40 Identities=25% Similarity=0.325 Sum_probs=31.0
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
..+.+++.+.|+.|.+. ...++|+|+.....++.++....
T Consensus 82 ~~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~g 121 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSK-GFKLAVVSNKLEELSKKILDILN 121 (222)
T ss_dssp CEECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHTT
T ss_pred CccCCCHHHHHHHHHHC-CCeEEEEcCCCHHHHHHHHHHcC
Confidence 35678899999999774 46899999999887777665543
No 195
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=41.56 E-value=8 Score=36.89 Aligned_cols=38 Identities=16% Similarity=0.298 Sum_probs=30.4
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|.+. ...++|+|+.....++..+...
T Consensus 110 ~~~~~~~~~l~~l~~~-g~~~~i~s~~~~~~~~~~l~~~ 147 (240)
T 3sd7_A 110 KIYENMKEILEMLYKN-GKILLVATSKPTVFAETILRYF 147 (240)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHT
T ss_pred ccCccHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHc
Confidence 4778899999999875 4689999999888777766543
No 196
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=40.78 E-value=8.4 Score=37.27 Aligned_cols=38 Identities=21% Similarity=0.371 Sum_probs=28.8
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|.+. ...++|+|+.....++..+...
T Consensus 114 ~~~~~~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~ 151 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQ-GYILAVVTNKPTKHVQPILTAF 151 (243)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHT
T ss_pred ccCCCHHHHHHHHHHC-CCEEEEEECCcHHHHHHHHHHc
Confidence 3457788999998764 4689999999988776666543
No 197
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=40.43 E-value=8.3 Score=37.13 Aligned_cols=38 Identities=11% Similarity=0.239 Sum_probs=27.3
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+.+.+.|+.|.+. ...++|+|+.+...++..+...
T Consensus 110 ~~~~g~~~~l~~l~~~-g~~~~i~t~~~~~~~~~~l~~~ 147 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQK-GVKLAVVSNKPNEAVQVLVEEL 147 (240)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHc
Confidence 3457788888888764 4688899998887666665543
No 198
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=40.37 E-value=9.7 Score=35.70 Aligned_cols=13 Identities=15% Similarity=0.450 Sum_probs=0.0
Q ss_pred eEEEEcccccccC
Q 005855 592 RLLILGFNATLTE 604 (673)
Q Consensus 592 rll~lDyDGTL~~ 604 (673)
+.++||+||||+.
T Consensus 2 kAViFD~DGTL~d 14 (216)
T 3kbb_A 2 EAVIFDMDGVLMD 14 (216)
T ss_dssp CEEEEESBTTTBC
T ss_pred eEEEECCCCcccC
No 199
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=39.77 E-value=9.9 Score=37.47 Aligned_cols=13 Identities=23% Similarity=0.537 Sum_probs=0.0
Q ss_pred eEEEEcccccccC
Q 005855 592 RLLILGFNATLTE 604 (673)
Q Consensus 592 rll~lDyDGTL~~ 604 (673)
++++||+||||+.
T Consensus 19 k~viFDlDGTLvd 31 (260)
T 2gfh_A 19 RAVFFDLDNTLID 31 (260)
T ss_dssp CEEEECCBTTTBC
T ss_pred eEEEEcCCCCCCC
No 200
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=39.53 E-value=8.5 Score=36.50 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=26.7
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+.+++.+.|+.|.+. .-.++|+|+.+.. ++..+..
T Consensus 95 ~~~~~~~~~l~~l~~~-g~~~~i~Tn~~~~-~~~~l~~ 130 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSN-GYKLALVSNASPR-VKTLLEK 130 (220)
T ss_dssp EECTTHHHHHHHHHTT-TCEEEECCSCHHH-HHHHHHH
T ss_pred eECcCHHHHHHHHHHC-CCEEEEEeCCcHH-HHHHHHh
Confidence 5678888999998764 4689999998763 6665544
No 201
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=39.51 E-value=1.1e+02 Score=25.43 Aligned_cols=79 Identities=15% Similarity=0.151 Sum_probs=46.7
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...++.. .|++++--.. +.=|+-.++.+........++++|........ + |..+++..|.+.+++.++
T Consensus 35 ~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~ 114 (126)
T 1dbw_A 35 SAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEA 114 (126)
T ss_dssp CHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHhCHHHheeCCCCHHHHHHH
Confidence 44555555543 4666653322 22344455555432222234566765543222 2 677999999999999999
Q ss_pred HHHHhcC
Q 005855 521 IARALNM 527 (673)
Q Consensus 521 I~~aL~m 527 (673)
|..++..
T Consensus 115 i~~~~~~ 121 (126)
T 1dbw_A 115 IERASEH 121 (126)
T ss_dssp HHHHHTT
T ss_pred HHHHHHh
Confidence 9988753
No 202
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=39.43 E-value=90 Score=26.95 Aligned_cols=79 Identities=25% Similarity=0.225 Sum_probs=47.3
Q ss_pred CHHHHHHHHH--HcCEEEEcC-CCcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYA--VTDVALVTS-LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~--~ADv~vv~S-l~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...++. ..|++++-- +-+.-|+-.++.+-.......++++|........ + |..+++..|.+.+++.++
T Consensus 49 ~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~ 128 (152)
T 3eul_A 49 DGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKA 128 (152)
T ss_dssp SHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHHcCCCEEEecCCCHHHHHHH
Confidence 3444444443 246665543 3344455666666543222234566665543321 2 678999999999999999
Q ss_pred HHHHhcC
Q 005855 521 IARALNM 527 (673)
Q Consensus 521 I~~aL~m 527 (673)
|..++.-
T Consensus 129 i~~~~~~ 135 (152)
T 3eul_A 129 VLDCAKG 135 (152)
T ss_dssp HHHHHHC
T ss_pred HHHHHcC
Confidence 9999863
No 203
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=39.41 E-value=26 Score=40.60 Aligned_cols=70 Identities=10% Similarity=0.180 Sum_probs=51.5
Q ss_pred HHHHHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 580 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 580 ~~~~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+..+.+.....+.+++.+||++..... ..-++.++..++++.|.+. .-.|+++||+.....+.....
T Consensus 523 ~~~~~~~~~~G~~vl~va~d~~~~G~i~-----------i~D~i~~~~~~aI~~L~~~-Gi~v~mlTGd~~~~a~~ia~~ 590 (736)
T 3rfu_A 523 FEKADELRGKGASVMFMAVDGKTVALLV-----------VEDPIKSSTPETILELQQS-GIEIVMLTGDSKRTAEAVAGT 590 (736)
T ss_dssp HHHHHHHHHTTCEEEEEEETTEEEEEEE-----------EECCBCSSHHHHHHHHHHH-TCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEECCEEEEEEE-----------eeccchhhHHHHHHHHHHC-CCeEEEECCCCHHHHHHHHHH
Confidence 3445567777889999999999886432 2234567888999998875 468999999999877766554
Q ss_pred cc
Q 005855 660 VL 661 (673)
Q Consensus 660 ~~ 661 (673)
..
T Consensus 591 lg 592 (736)
T 3rfu_A 591 LG 592 (736)
T ss_dssp HT
T ss_pred cC
Confidence 43
No 204
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=39.12 E-value=10 Score=36.93 Aligned_cols=28 Identities=18% Similarity=0.232 Sum_probs=19.5
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
.+.+.+.++|+.|.+. .-.+++.|++..
T Consensus 116 ~~~p~~~~ll~~Lk~~-g~~i~i~~~~~~ 143 (250)
T 4gib_A 116 DILPGIESLLIDVKSN-NIKIGLSSASKN 143 (250)
T ss_dssp GSCTTHHHHHHHHHHT-TCEEEECCSCTT
T ss_pred ccchhHHHHHHHHHhc-ccccccccccch
Confidence 3567888999998775 455667766643
No 205
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=39.04 E-value=89 Score=27.00 Aligned_cols=78 Identities=17% Similarity=0.256 Sum_probs=45.0
Q ss_pred HHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHHH
Q 005855 450 FPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAI 521 (673)
Q Consensus 450 ~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~aI 521 (673)
.++...++.. .|++++--. -+.-|+-.++.+........++++|........ + |..+++..|.+.+++.++|
T Consensus 55 ~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i 134 (150)
T 4e7p_A 55 GQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTL 134 (150)
T ss_dssp HHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHH
T ss_pred HHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHH
Confidence 3444444332 355554432 333445555555443222234566655442221 2 6778999999999999999
Q ss_pred HHHhcC
Q 005855 522 ARALNM 527 (673)
Q Consensus 522 ~~aL~m 527 (673)
..++..
T Consensus 135 ~~~~~~ 140 (150)
T 4e7p_A 135 HTVLEG 140 (150)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 999863
No 206
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=38.76 E-value=87 Score=25.41 Aligned_cols=77 Identities=10% Similarity=0.138 Sum_probs=45.0
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhh---ccCceEEECCCCHHHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---LGAGAILVNPWNITEVANAIA 522 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---lg~~gllVnP~D~~~lA~aI~ 522 (673)
+.++...++.. .|++++--. -+.-|+-.++.+........++++|........ .|..+++..|.+.+++..+|.
T Consensus 33 ~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~ 112 (116)
T 3a10_A 33 NGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTAYSHYRSDMSSWAADEYVVKSFNFDELKEKVK 112 (116)
T ss_dssp SHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCGGGGGCGGGGGSSEEEECCSSTHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEECCcchHHHHHhccccceEECCCCHHHHHHHHH
Confidence 34555555544 466665432 233345556665432222234566655433211 267789999999999999998
Q ss_pred HHh
Q 005855 523 RAL 525 (673)
Q Consensus 523 ~aL 525 (673)
.++
T Consensus 113 ~~~ 115 (116)
T 3a10_A 113 KLL 115 (116)
T ss_dssp HHT
T ss_pred HHh
Confidence 775
No 207
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=38.42 E-value=1e+02 Score=25.17 Aligned_cols=78 Identities=21% Similarity=0.216 Sum_probs=46.1
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...++.. .|++++--.. +.-|+-.++.+........++++|........ + |..+++..|.+.+++..+
T Consensus 32 ~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~ 111 (121)
T 2pl1_A 32 DAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMAR 111 (121)
T ss_dssp SHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCCHHHHHHHHHcCccceEECCCCHHHHHHH
Confidence 34555555443 4777654322 23345556665533222334566665543222 2 667899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 112 i~~~~~ 117 (121)
T 2pl1_A 112 MQALMR 117 (121)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988763
No 208
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=38.23 E-value=89 Score=26.50 Aligned_cols=78 Identities=13% Similarity=0.104 Sum_probs=42.2
Q ss_pred CHHHHHHHHHH--cCEEEEcC-CCcCCChhHHHHHhhcc--CCCceEEEeCCCCchh---hc--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTS-LRDGMNLVSYEFVACQD--LKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~S-l~EGf~Lv~lEamA~~~--~~~g~lVlSe~aG~~~---~l--g~~gllVnP~D~~~lA 518 (673)
+.++...++.. .|++++-. +-++-|+-.++.+.... ....++++|....... .+ |..+++..|.+.+++.
T Consensus 34 ~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~ 113 (140)
T 3n53_A 34 NEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLL 113 (140)
T ss_dssp SHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHHH
Confidence 44555554433 46666543 33444555666665432 2223455565432221 12 6678999999999999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
++|..++.
T Consensus 114 ~~i~~~~~ 121 (140)
T 3n53_A 114 SRIEIHLR 121 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99998884
No 209
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=36.38 E-value=12 Score=36.29 Aligned_cols=28 Identities=18% Similarity=0.194 Sum_probs=21.8
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCH
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDR 650 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~ 650 (673)
.+.+.+.++|+.|.+. +-.++|+|++..
T Consensus 95 ~~~pg~~~ll~~L~~~-g~~i~i~t~~~~ 122 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQ-QISVGLASVSLN 122 (243)
T ss_dssp GBCTTHHHHHHHHHHT-TCEEEECCCCTT
T ss_pred cccccHHHHHHhhhcc-cccceecccccc
Confidence 3567899999999875 567888888764
No 210
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=36.19 E-value=96 Score=25.32 Aligned_cols=77 Identities=14% Similarity=0.204 Sum_probs=44.9
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...++.. .|++++--.. +.-|+-.++.+.........+++|........ + |..+++..|.+.+++.++
T Consensus 35 ~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (120)
T 1tmy_A 35 NGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEA 114 (120)
T ss_dssp SHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHHhCcceeEeCCCCHHHHHHH
Confidence 34444444433 5776654332 33345556655432222234566665543221 1 667899999999999999
Q ss_pred HHHHh
Q 005855 521 IARAL 525 (673)
Q Consensus 521 I~~aL 525 (673)
|.+++
T Consensus 115 i~~~~ 119 (120)
T 1tmy_A 115 LNKVS 119 (120)
T ss_dssp HHHHC
T ss_pred HHHHh
Confidence 98775
No 211
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=36.17 E-value=99 Score=26.23 Aligned_cols=78 Identities=9% Similarity=0.083 Sum_probs=47.1
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhh-c--cCceEEECCCCHHHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS-L--GAGAILVNPWNITEVANAIA 522 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~-l--g~~gllVnP~D~~~lA~aI~ 522 (673)
+..+...++.. .|++++--.. +.-|+-.++.+........++++|........ + |..+++..|.+.+++..+|.
T Consensus 43 ~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~ 122 (143)
T 2qv0_A 43 DGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKPYQESRIINMLQ 122 (143)
T ss_dssp CHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESCCTTHHHHHHTTCSEEEESSCCHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEeCCHHHHHHHHhCCcceEEeCCCCHHHHHHHHH
Confidence 44555555543 4777765433 33455566666543222224556655332221 2 67789999999999999999
Q ss_pred HHhc
Q 005855 523 RALN 526 (673)
Q Consensus 523 ~aL~ 526 (673)
.++.
T Consensus 123 ~~~~ 126 (143)
T 2qv0_A 123 KLTT 126 (143)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8884
No 212
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=35.66 E-value=11 Score=37.20 Aligned_cols=38 Identities=26% Similarity=0.271 Sum_probs=29.2
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+.+.+.+.|+.|.+.+...++|+|+.....++..+..
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~ 151 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDI 151 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHH
Confidence 45688899999987643467899999998877776654
No 213
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=35.48 E-value=1.5e+02 Score=24.79 Aligned_cols=74 Identities=18% Similarity=0.227 Sum_probs=44.9
Q ss_pred CHHHHHHHHHH--cCEEEEcCCCcCCChhHHHHHhhccC-CCceEEEeCCCCchhh---c--cCceEEECCC-CHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLRDGMNLVSYEFVACQDL-KKGVLILSEFAGAAQS---L--GAGAILVNPW-NITEVAN 519 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~EGf~Lv~lEamA~~~~-~~g~lVlSe~aG~~~~---l--g~~gllVnP~-D~~~lA~ 519 (673)
+.++...++.. .|+++ .-+.-|+-.++.+... . .-.++++|........ + |..+++..|. +.+++..
T Consensus 50 ~~~~al~~l~~~~~dlvi---~~~~~g~~~~~~l~~~-~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~ 125 (137)
T 2pln_A 50 SLEDGEYLMDIRNYDLVM---VSDKNALSFVSRIKEK-HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVA 125 (137)
T ss_dssp CHHHHHHHHHHSCCSEEE---ECSTTHHHHHHHHHHH-STTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHHHH
T ss_pred CHHHHHHHHHcCCCCEEE---EcCccHHHHHHHHHhc-CCCccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHHHHH
Confidence 34555555443 47777 2233345556655443 2 2234556655433222 1 6778999999 9999999
Q ss_pred HHHHHhc
Q 005855 520 AIARALN 526 (673)
Q Consensus 520 aI~~aL~ 526 (673)
+|..++.
T Consensus 126 ~i~~~~~ 132 (137)
T 2pln_A 126 RIEARLR 132 (137)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 9999885
No 214
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=35.46 E-value=13 Score=37.05 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=25.1
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.+.+++.++|+. .-.++|+|+.++...+..+...
T Consensus 125 ~~~pgv~e~L~~-----g~~l~i~Tn~~~~~~~~~l~~~ 158 (253)
T 2g80_A 125 PVYADAIDFIKR-----KKRVFIYSSGSVKAQKLLFGYV 158 (253)
T ss_dssp CCCHHHHHHHHH-----CSCEEEECSSCHHHHHHHHHSB
T ss_pred CCCCCHHHHHHc-----CCEEEEEeCCCHHHHHHHHHhh
Confidence 445667777766 5689999999998877776543
No 215
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=35.13 E-value=1.2e+02 Score=25.52 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=47.2
Q ss_pred CHHHHHHHHHH--cCEEEEcCCCcC-CChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~EG-f~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+..+...++.. .|++++--...+ =|+-.++.+........++++|........ + |..+++..|.+.+++.++
T Consensus 37 ~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~ 116 (133)
T 3b2n_A 37 NGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYVLKERSIEELVET 116 (133)
T ss_dssp CHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHH
T ss_pred CHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHHcCCcEEEECCCCHHHHHHH
Confidence 34555554443 577776543333 345556666432222234566665543221 2 678999999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 117 i~~~~~ 122 (133)
T 3b2n_A 117 INKVNN 122 (133)
T ss_dssp HHHHHC
T ss_pred HHHHHc
Confidence 998885
No 216
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=35.04 E-value=59 Score=28.30 Aligned_cols=78 Identities=19% Similarity=0.185 Sum_probs=47.4
Q ss_pred CHHHHHHHHHH--cCEEEEcC-CCcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--c-CceEEECCCCHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTS-LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--G-AGAILVNPWNITEVAN 519 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~S-l~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g-~~gllVnP~D~~~lA~ 519 (673)
+.++...++.. .|++++-- +-+.-|+-.++.+........++++|........ + | ..+++..|.+.+++..
T Consensus 46 ~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~l~~ 125 (153)
T 3hv2_A 46 DATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKPWDDQELLL 125 (153)
T ss_dssp SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSSCCHHHHHH
T ss_pred CHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCCCCHHHHHH
Confidence 44555555544 36666543 3344456666666543222234556654433221 2 5 5689999999999999
Q ss_pred HHHHHhc
Q 005855 520 AIARALN 526 (673)
Q Consensus 520 aI~~aL~ 526 (673)
+|..++.
T Consensus 126 ~i~~~l~ 132 (153)
T 3hv2_A 126 ALRQALE 132 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999985
No 217
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=34.66 E-value=2e+02 Score=24.05 Aligned_cols=79 Identities=13% Similarity=0.155 Sum_probs=47.7
Q ss_pred CHHHHHHHHHH-------cCEEEEcCCCcC-CChhHHHHHhhc-cCCCceEEEeCCCCchhh---c--cCceEEECCCCH
Q 005855 449 DFPALCALYAV-------TDVALVTSLRDG-MNLVSYEFVACQ-DLKKGVLILSEFAGAAQS---L--GAGAILVNPWNI 514 (673)
Q Consensus 449 ~~~el~aly~~-------ADv~vv~Sl~EG-f~Lv~lEamA~~-~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~ 514 (673)
+.++...++.. .|++++=-...| =|+-.++.+-.. .....++++|........ + |..+++..|.+.
T Consensus 35 ~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~ 114 (133)
T 2r25_B 35 DGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMNGFLSKPIKR 114 (133)
T ss_dssp SHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCH
T ss_pred CHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCH
Confidence 34555555543 477776433222 245556665432 112235566766554322 2 678999999999
Q ss_pred HHHHHHHHHHhcC
Q 005855 515 TEVANAIARALNM 527 (673)
Q Consensus 515 ~~lA~aI~~aL~m 527 (673)
+++.++|.+++..
T Consensus 115 ~~L~~~l~~~~~~ 127 (133)
T 2r25_B 115 PKLKTILTEFCAA 127 (133)
T ss_dssp HHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998753
No 218
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=34.29 E-value=80 Score=26.44 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=41.9
Q ss_pred HcCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchh---hc--cCceEEECCCCHHHHHHHHHHHhc
Q 005855 459 VTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVANAIARALN 526 (673)
Q Consensus 459 ~ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~---~l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (673)
..|++++-.. -+.-|+-.++.+-.......++++|....... .+ |..+++..|.+.+++.++|..++.
T Consensus 46 ~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 119 (134)
T 3f6c_A 46 KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKN 119 (134)
T ss_dssp CCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSEEEEGGGCTHHHHHHHHHHHT
T ss_pred CCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHHHhCCCEEEeCCCCHHHHHHHHHHHHC
Confidence 3577666543 34445666666654322223455665443222 12 678899999999999999999885
No 219
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=34.09 E-value=42 Score=38.17 Aligned_cols=70 Identities=11% Similarity=0.156 Sum_probs=52.0
Q ss_pred HHHHHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 580 ADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 580 ~~~~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
....+.+.....+.+++.+||++..... ...++.+++.++++.|.+. .-.|+++||+.....+.....
T Consensus 426 ~~~~~~~~~~g~~~l~va~~~~~~G~i~-----------~~D~l~~~~~~~i~~L~~~-Gi~v~~~TGd~~~~a~~ia~~ 493 (645)
T 3j08_A 426 ELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKRM-GIKVGMITGDNWRSAEAISRE 493 (645)
T ss_dssp HHHHHHHHTTTCCCEEEEETTEEEEEEE-----------EECCCTTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEEECCEEEEEEE-----------ecCCchhHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHH
Confidence 3445566667788999999999876432 2334668999999999875 467999999999888776655
Q ss_pred cc
Q 005855 660 VL 661 (673)
Q Consensus 660 ~~ 661 (673)
..
T Consensus 494 lg 495 (645)
T 3j08_A 494 LN 495 (645)
T ss_dssp HT
T ss_pred cC
Confidence 43
No 220
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=34.09 E-value=89 Score=26.02 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=45.6
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCC-CHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPW-NITEVAN 519 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~-D~~~lA~ 519 (673)
+.++...+++. .|++++-.. -+.-|+-.++.+........++++|........ + |..+++..|. +.+.+.+
T Consensus 39 ~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~~l~~ 118 (130)
T 3eod_A 39 DGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLRE 118 (130)
T ss_dssp CHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCcHHHHHH
Confidence 44555555543 466665432 344466666766543223345566665543321 2 7788999999 9999999
Q ss_pred HHHHHhc
Q 005855 520 AIARALN 526 (673)
Q Consensus 520 aI~~aL~ 526 (673)
+|..++.
T Consensus 119 ~i~~~l~ 125 (130)
T 3eod_A 119 MVFACLY 125 (130)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9999986
No 221
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=33.96 E-value=13 Score=36.48 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=26.4
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDL 659 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~ 659 (673)
.+.+++.++|+.|.+. ...++|+|+.... ++..+..
T Consensus 106 ~~~~~~~~~l~~l~~~-g~~~~i~tn~~~~-~~~~l~~ 141 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTR-GLRLAVISNFDRR-LEGILGG 141 (263)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEEESCCTT-HHHHHHH
T ss_pred eECcCHHHHHHHHHhC-CCcEEEEeCCcHH-HHHHHHh
Confidence 4678889999999875 5788999987653 5555543
No 222
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=33.63 E-value=1.4e+02 Score=24.86 Aligned_cols=79 Identities=16% Similarity=0.164 Sum_probs=46.5
Q ss_pred CHHHHHHHHHH--cCEEEEcCCCcC-CChhHHHHHhhccCCCceEEEeCCCCchh---hc--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~EG-f~Lv~lEamA~~~~~~g~lVlSe~aG~~~---~l--g~~gllVnP~D~~~lA~a 520 (673)
+..+...++.. .|++++--...+ -|+-.++.+........++++|....... .+ |..+++..|.+.+++..+
T Consensus 35 ~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (136)
T 1mvo_A 35 DGEEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNAR 114 (136)
T ss_dssp SHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECTTCCCCHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHhCCCCEEEECCCCHHHHHHH
Confidence 34444444433 577766433323 34555565544322223455665443322 12 677899999999999999
Q ss_pred HHHHhcC
Q 005855 521 IARALNM 527 (673)
Q Consensus 521 I~~aL~m 527 (673)
|..++..
T Consensus 115 i~~~~~~ 121 (136)
T 1mvo_A 115 VKAILRR 121 (136)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9988864
No 223
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=33.46 E-value=1.4e+02 Score=25.37 Aligned_cols=78 Identities=15% Similarity=0.132 Sum_probs=48.0
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhc--cCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQ--DLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~--~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA 518 (673)
+.++...++.. .|++++-.. -+.-|+-.++.+... .....++++|........ + |..+++..|.+.+++.
T Consensus 40 ~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~ 119 (147)
T 2zay_A 40 NAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLS 119 (147)
T ss_dssp SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHH
Confidence 44555555443 577766543 333456666666541 122234566665543221 1 6789999999999999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
.+|..++.
T Consensus 120 ~~i~~~~~ 127 (147)
T 2zay_A 120 ARIKRVLK 127 (147)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999885
No 224
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=33.34 E-value=1.3e+02 Score=25.19 Aligned_cols=79 Identities=13% Similarity=0.110 Sum_probs=47.9
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhc-cCCCc-eEEEeCCCCchhh---c--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQ-DLKKG-VLILSEFAGAAQS---L--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~-~~~~g-~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA 518 (673)
+.++...+++. .|++++-... +.-|+-.++.+... ..... ++++|........ + |..+++..|.+.+++.
T Consensus 42 ~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~ 121 (143)
T 3cnb_A 42 NPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFGKPLNFTLLE 121 (143)
T ss_dssp SHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHH
Confidence 34555555544 4777665433 33455666666542 11223 3555655543321 1 6778999999999999
Q ss_pred HHHHHHhcC
Q 005855 519 NAIARALNM 527 (673)
Q Consensus 519 ~aI~~aL~m 527 (673)
.+|..++.-
T Consensus 122 ~~i~~~~~~ 130 (143)
T 3cnb_A 122 KTIKQLVEQ 130 (143)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998853
No 225
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=33.33 E-value=1e+02 Score=25.96 Aligned_cols=78 Identities=18% Similarity=0.100 Sum_probs=46.1
Q ss_pred CHHHHHHHHHH--cCEEEEcCCCcC-CChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~EG-f~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+..+...++.. .|++++--.-.+ -|+-.++.+......-.++++|........ + |..+++..|.+.+++..+
T Consensus 35 ~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 114 (132)
T 3crn_A 35 TAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYASLENSVFSLNAGADAYIMKPVNPRDLLEK 114 (132)
T ss_dssp SHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccccHHHHHHHHhccchhhccCCCCHHHHHHH
Confidence 34555555443 477766433222 244555555432222234566665543322 2 678999999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 115 i~~~~~ 120 (132)
T 3crn_A 115 IKEKLD 120 (132)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988874
No 226
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=33.26 E-value=1.3e+02 Score=25.13 Aligned_cols=79 Identities=8% Similarity=0.175 Sum_probs=47.5
Q ss_pred CHHHHHHHHHH---cCEEEEcC-CCcCCChhHHHHHhhcc-CCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV---TDVALVTS-LRDGMNLVSYEFVACQD-LKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~---ADv~vv~S-l~EGf~Lv~lEamA~~~-~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA 518 (673)
+..+....+.. .|++++-- +-+.-|+-.++.+-... ....++++|........ + |..+++..|.+.+++.
T Consensus 39 ~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~ 118 (136)
T 3hdv_A 39 GAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLL 118 (136)
T ss_dssp SHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHHhCCcceEEeCCCCHHHHH
Confidence 34444444443 46666543 33445566677665431 22234555655443221 2 6778999999999999
Q ss_pred HHHHHHhcC
Q 005855 519 NAIARALNM 527 (673)
Q Consensus 519 ~aI~~aL~m 527 (673)
.+|.+++.-
T Consensus 119 ~~i~~~~~~ 127 (136)
T 3hdv_A 119 ELVNKELKI 127 (136)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHhcC
Confidence 999999863
No 227
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=33.15 E-value=2.3e+02 Score=25.63 Aligned_cols=67 Identities=13% Similarity=0.237 Sum_probs=40.7
Q ss_pred HcCEEEEcCCCcCC-ChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHHHHHHhc
Q 005855 459 VTDVALVTSLRDGM-NLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAIARALN 526 (673)
Q Consensus 459 ~ADv~vv~Sl~EGf-~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (673)
..|++++--...|+ |+ ..+.+........++++|........ + |..+++..|.+.+++..+|..++.
T Consensus 52 ~~dlvl~D~~mp~~~g~-l~~~~~~~~~~~~ii~lt~~~~~~~~~~a~~~ga~~~l~KP~~~~~L~~~l~~~~~ 124 (196)
T 1qo0_D 52 PVDVVFTSIFQNRHHDE-IAALLAAGTPRTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARR 124 (196)
T ss_dssp CCSEEEEECCSSTHHHH-HHHHHHHSCTTCEEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHH
T ss_pred CCCEEEEeCCCCccchH-HHHHHhccCCCCCEEEEEcCCChHHHHHHHHcCCCeeEecCcCHHHHHHHHHHHHH
Confidence 45777654433444 34 44544432112234556665443221 2 678999999999999999999885
No 228
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=33.00 E-value=82 Score=26.69 Aligned_cols=67 Identities=9% Similarity=0.209 Sum_probs=41.7
Q ss_pred cCEEEEcC-CCc--CCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHHHHHHhc
Q 005855 460 TDVALVTS-LRD--GMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAIARALN 526 (673)
Q Consensus 460 ADv~vv~S-l~E--Gf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (673)
.|++++-- +-+ .-|+-.++.+......-.++++|........ + |..+++..|.+.+++..+|.+++.
T Consensus 51 ~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~ 125 (136)
T 3kto_A 51 AIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSSDIPTAVRAMRASAADFIEKPFIEHVLVHDVQQIIN 125 (136)
T ss_dssp EEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSEEEESSBCHHHHHHHHHHHHH
T ss_pred CCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHcChHHheeCCCCHHHHHHHHHHHHh
Confidence 35555543 233 3345556665543222345666665543222 2 678899999999999999998885
No 229
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=32.96 E-value=67 Score=27.13 Aligned_cols=78 Identities=15% Similarity=0.142 Sum_probs=46.7
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...+++. .|++++-.. -+.-|+-.++.+-.......++++|........ + |..+++..|.+.+++.++
T Consensus 39 ~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~ 118 (137)
T 3hdg_A 39 DGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVIVISAFSEMKYFIKAIELGVHLFLPKPIEPGRLMET 118 (137)
T ss_dssp SHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEEECCCCCCHHHHHHHHHHCCSEECCSSCCHHHHHHH
T ss_pred CHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEecCcChHHHHHHHhCCcceeEcCCCCHHHHHHH
Confidence 34555554443 477666543 344455666666543222223445554432221 2 678899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|.+++.
T Consensus 119 i~~~~~ 124 (137)
T 3hdg_A 119 LEDFRH 124 (137)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999884
No 230
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=32.79 E-value=68 Score=27.53 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=41.1
Q ss_pred HcCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHHHHHHhc
Q 005855 459 VTDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAIARALN 526 (673)
Q Consensus 459 ~ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (673)
..|++++--. -+.-|+-.++.+......-.++++|........ + |..+++..|.+.+++..+|..++.
T Consensus 67 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 67 AFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp TCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHHHh
Confidence 4577665433 232344555555433222234566665443222 2 567899999999999999999885
No 231
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=32.44 E-value=1.1e+02 Score=26.03 Aligned_cols=78 Identities=12% Similarity=0.100 Sum_probs=47.2
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhc--cCCCceEEEeCCCCchhh---c--cCceEEECCC-CHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQ--DLKKGVLILSEFAGAAQS---L--GAGAILVNPW-NITEV 517 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~--~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~-D~~~l 517 (673)
+.++...++.. .|++++-.. -+.-|+-.++.+-.. ...-.++++|........ + |..+++..|. +.+++
T Consensus 39 ~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l 118 (144)
T 3kht_A 39 NGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDF 118 (144)
T ss_dssp SHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHH
T ss_pred CHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHH
Confidence 44555555543 466665433 344456666666541 112234556655433322 2 6789999999 99999
Q ss_pred HHHHHHHhc
Q 005855 518 ANAIARALN 526 (673)
Q Consensus 518 A~aI~~aL~ 526 (673)
.++|..++.
T Consensus 119 ~~~i~~~l~ 127 (144)
T 3kht_A 119 YGRIYAIFS 127 (144)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999884
No 232
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=31.98 E-value=16 Score=36.19 Aligned_cols=37 Identities=5% Similarity=0.117 Sum_probs=29.4
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
..+.+++.++|+.|.+. .-.++|+|+.+....+..+.
T Consensus 129 ~~~~~g~~~~L~~L~~~-g~~~~i~Tn~~~~~~~~~l~ 165 (261)
T 1yns_A 129 AEFFADVVPAVRKWREA-GMKVYIYSSGSVEAQKLLFG 165 (261)
T ss_dssp BCCCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHH
T ss_pred cccCcCHHHHHHHHHhC-CCeEEEEeCCCHHHHHHHHH
Confidence 35678899999999764 46899999999987777655
No 233
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=31.91 E-value=58 Score=37.54 Aligned_cols=71 Identities=11% Similarity=0.145 Sum_probs=52.8
Q ss_pred hHHHHHHHhhccCeEEEEcccccccCCCCCCCCCCccccccccCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhc
Q 005855 579 EADSIERYLRSNNRLLILGFNATLTEPVDTPGRRGDQIREMELKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLD 658 (673)
Q Consensus 579 ~~~~~~~y~~s~~rll~lDyDGTL~~~~~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~ 658 (673)
.....+.+.....+.+++.+||++..... ..-++.+++.+.++.|.+. .-.|+++||+.....+....
T Consensus 503 ~~~~~~~~~~~g~~~~~va~~~~~~G~i~-----------i~D~~~~~~~~~i~~l~~~-Gi~v~~~TGd~~~~a~~ia~ 570 (723)
T 3j09_A 503 VELALEKLEREAKTAVIVARNGRVEGIIA-----------VSDTLKESAKPAVQELKRM-GIKVGMITGDNWRSAEAISR 570 (723)
T ss_dssp HHHHHHHHHTTTCEEEEEEETTEEEEEEE-----------EECCSCTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEECCEEEEEEe-----------ecCCcchhHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHH
Confidence 34455567777789999999999886432 2345678999999999875 45799999999988776655
Q ss_pred ccc
Q 005855 659 LVL 661 (673)
Q Consensus 659 ~~~ 661 (673)
...
T Consensus 571 ~lg 573 (723)
T 3j09_A 571 ELN 573 (723)
T ss_dssp HHT
T ss_pred HcC
Confidence 443
No 234
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=31.20 E-value=1.2e+02 Score=25.75 Aligned_cols=78 Identities=14% Similarity=0.188 Sum_probs=45.6
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...++.. .|++++--.. +.-|+-.++.+........++++|........ + |..+++..|.+.+++..+
T Consensus 36 ~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 115 (137)
T 3cfy_A 36 TGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHGSVDLAVNLIQKGAEDFLEKPINADRLKTS 115 (137)
T ss_dssp SHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecCcHHHHHHHHHCCccEEEeCCCCHHHHHHH
Confidence 34454444443 5777654332 33345555655432112234556655433221 2 677899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 116 i~~~~~ 121 (137)
T 3cfy_A 116 VALHLK 121 (137)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998874
No 235
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=31.15 E-value=1.1e+02 Score=26.04 Aligned_cols=78 Identities=12% Similarity=0.088 Sum_probs=44.7
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCch---hhc--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAA---QSL--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~---~~l--g~~gllVnP~D~~~lA~a 520 (673)
+..+...++.. .|++++--.. +.-|+-.++.+........++++|...... ..+ |..+++..|.+.+++.++
T Consensus 37 ~~~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 116 (141)
T 3cu5_A 37 DGINAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDA 116 (141)
T ss_dssp SHHHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSCCHHHHHHH
T ss_pred cHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHHHHHH
Confidence 34555555543 4776654332 233455566554322222345566544322 222 667899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 117 i~~~~~ 122 (141)
T 3cu5_A 117 LKQSIQ 122 (141)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998884
No 236
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=31.11 E-value=15 Score=35.80 Aligned_cols=39 Identities=18% Similarity=0.297 Sum_probs=31.9
Q ss_pred CCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhcccc
Q 005855 622 KLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLVL 661 (673)
Q Consensus 622 ~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~~ 661 (673)
.+.+++.+.|+.|.+. ...++|+||......+..+....
T Consensus 144 ~~~~~~~~~l~~l~~~-g~~~~i~T~~~~~~~~~~~~~~g 182 (280)
T 3skx_A 144 RIRPESREAISKLKAI-GIKCMMLTGDNRFVAKWVAEELG 182 (280)
T ss_dssp EECTTHHHHHHHHHHT-TCEEEEECSSCHHHHHHHHHHHT
T ss_pred CCCHhHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHcC
Confidence 5678999999999875 56899999999998887766544
No 237
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=30.76 E-value=78 Score=26.72 Aligned_cols=67 Identities=13% Similarity=0.049 Sum_probs=39.5
Q ss_pred cCEEEEcC-CCcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHHHHHHhc
Q 005855 460 TDVALVTS-LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAIARALN 526 (673)
Q Consensus 460 ADv~vv~S-l~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~aI~~aL~ 526 (673)
.|++++-. +-+.=|+-.++.+-.......++++|........ + |..+++..|.+.+++..+|..++.
T Consensus 60 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~ 132 (135)
T 3snk_A 60 PGIVILDLGGGDLLGKPGIVEARALWATVPLIAVSDELTSEQTRVLVRMNASDWLHKPLDGKELLNAVTFHDT 132 (135)
T ss_dssp CSEEEEEEETTGGGGSTTHHHHHGGGTTCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTC-
T ss_pred CCEEEEeCCCCCchHHHHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHHcCcHhhccCCCCHHHHHHHHHHHhc
Confidence 46655432 2222334444555443222345566665543222 2 678899999999999999998874
No 238
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=30.28 E-value=1.7e+02 Score=23.78 Aligned_cols=76 Identities=14% Similarity=0.197 Sum_probs=45.3
Q ss_pred CHHHHHHHHHH--cCEEEEcCCCcC-CChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~EG-f~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+..+...++.. .|++++--...+ -|+-.++.+... ....++++|........ + |..+++..|.+.+++..+
T Consensus 34 ~~~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~-~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~ 112 (122)
T 1zgz_A 34 SGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRER-STVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVR 112 (122)
T ss_dssp SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTT-CCCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhc-CCCCEEEEECCCChhhHHHHHHhCHHHHccCCCCHHHHHHH
Confidence 44555555544 577765433333 345555655431 12234556655443221 2 678999999999999999
Q ss_pred HHHHh
Q 005855 521 IARAL 525 (673)
Q Consensus 521 I~~aL 525 (673)
|..++
T Consensus 113 i~~~~ 117 (122)
T 1zgz_A 113 VKNLL 117 (122)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
No 239
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=30.10 E-value=1.1e+02 Score=26.37 Aligned_cols=78 Identities=17% Similarity=0.194 Sum_probs=46.4
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--c-CceEEECCCCHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--G-AGAILVNPWNITEVAN 519 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g-~~gllVnP~D~~~lA~ 519 (673)
+.++...++.. .|++++-.. -+.-|+-.++.+........++++|........ + | ..+++..|.+.+++..
T Consensus 39 ~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP~~~~~L~~ 118 (154)
T 2rjn_A 39 SPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLLKPWEDEDVFK 118 (154)
T ss_dssp CHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEESSCCHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeeeCCCCHHHHHH
Confidence 44555555543 477766433 333345555655432222234556655442221 1 4 5689999999999999
Q ss_pred HHHHHhc
Q 005855 520 AIARALN 526 (673)
Q Consensus 520 aI~~aL~ 526 (673)
+|..++.
T Consensus 119 ~i~~~~~ 125 (154)
T 2rjn_A 119 VVEKGLQ 125 (154)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999985
No 240
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=29.99 E-value=1.8e+02 Score=23.98 Aligned_cols=78 Identities=12% Similarity=0.167 Sum_probs=46.4
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhcc--CCCceEEEeCCCCchhhc-----cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQD--LKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~--~~~g~lVlSe~aG~~~~l-----g~~gllVnP~D~~~lA 518 (673)
+.++...+++. .|++++--. -+.=|+-.++.+-... ..-.++++|......... |..+++..|.+.+++.
T Consensus 34 ~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~ 113 (122)
T 3gl9_A 34 NGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFI 113 (122)
T ss_dssp SHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCCCCHHHHH
Confidence 44555555543 466665432 2333455556554321 112345666655433221 6788999999999999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
.+|.+++.
T Consensus 114 ~~i~~~l~ 121 (122)
T 3gl9_A 114 EEVKHLLN 121 (122)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99998875
No 241
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=29.94 E-value=1.7e+02 Score=24.28 Aligned_cols=78 Identities=14% Similarity=0.066 Sum_probs=45.3
Q ss_pred CHHHHHHHHHH--cCEEEEcC-CCcCCChhHHHHHhhccC--CCceEEEeCCCCchh--hc--cCceEEECCCCHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTS-LRDGMNLVSYEFVACQDL--KKGVLILSEFAGAAQ--SL--GAGAILVNPWNITEVAN 519 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~S-l~EGf~Lv~lEamA~~~~--~~g~lVlSe~aG~~~--~l--g~~gllVnP~D~~~lA~ 519 (673)
+.++....+.. .|++++-. +-+.=|+-.++.+..... .-.++++|....... .+ |..+++..|.+.+++.+
T Consensus 35 ~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~ 114 (133)
T 3nhm_A 35 DGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVKPPVLIA 114 (133)
T ss_dssp SHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCCHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCCHHHHHH
Confidence 44555555543 46666543 334445555666554311 223455565432221 12 56789999999999999
Q ss_pred HHHHHhc
Q 005855 520 AIARALN 526 (673)
Q Consensus 520 aI~~aL~ 526 (673)
+|..+|.
T Consensus 115 ~i~~~l~ 121 (133)
T 3nhm_A 115 QLHALLA 121 (133)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999985
No 242
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=29.36 E-value=1.5e+02 Score=24.26 Aligned_cols=78 Identities=17% Similarity=0.219 Sum_probs=45.4
Q ss_pred CHHHHHHHHH--HcCEEEEcCCCcC-CChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYA--VTDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~--~ADv~vv~Sl~EG-f~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...++. ..|++++--...+ -|+-.++.+........++++|........ + |..+++..|.+.+++..+
T Consensus 35 ~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 114 (124)
T 1srr_A 35 NGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDA 114 (124)
T ss_dssp SHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhccCCCCHHHHHHH
Confidence 3445444443 3577766433222 345555555432122234556665443221 1 677899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 115 i~~~~~ 120 (124)
T 1srr_A 115 VKKYLP 120 (124)
T ss_dssp HHHHSC
T ss_pred HHHHhc
Confidence 998875
No 243
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=29.07 E-value=2.4e+02 Score=23.66 Aligned_cols=77 Identities=12% Similarity=-0.011 Sum_probs=48.2
Q ss_pred CHHHHHHHHHH---cCEEEEcCCC-c-CCChhHHHHHhhccCCCceEEEeCCCCch---hhc--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV---TDVALVTSLR-D-GMNLVSYEFVACQDLKKGVLILSEFAGAA---QSL--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~---ADv~vv~Sl~-E-Gf~Lv~lEamA~~~~~~g~lVlSe~aG~~---~~l--g~~gllVnP~D~~~lA 518 (673)
+.++...++.. .|++++-... + .-|+-.++.+-..+ .-.++++|...... ..+ |..+++..|.+.+++.
T Consensus 37 ~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~-~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~ 115 (140)
T 3h5i_A 37 TGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQIS-ELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLI 115 (140)
T ss_dssp SHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHC-CCCEEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHH
T ss_pred ChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCC-CCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHH
Confidence 45666666643 4777765433 4 34556666665432 22345666554322 222 5678999999999999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
++|..++.
T Consensus 116 ~~i~~~l~ 123 (140)
T 3h5i_A 116 TIVEMALR 123 (140)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999984
No 244
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=28.21 E-value=2e+02 Score=23.65 Aligned_cols=80 Identities=13% Similarity=0.064 Sum_probs=48.0
Q ss_pred CHHHHHHHHHH---cCEEEEcCCC-c-CCChhHHHHHhhccCCCceEEEeCCCCchhhc---cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV---TDVALVTSLR-D-GMNLVSYEFVACQDLKKGVLILSEFAGAAQSL---GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~---ADv~vv~Sl~-E-Gf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l---g~~gllVnP~D~~~lA~a 520 (673)
+.++...++.. .|++++--.. + .-|+-.++.+......-.++++|......... ..++++..|.+.+++..+
T Consensus 37 ~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~l~kP~~~~~l~~~ 116 (132)
T 2rdm_A 37 SGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHAALEWASNGVPDSIILEKPFTSAQLITA 116 (132)
T ss_dssp SHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSCCTTHHHHSCTTCEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCccHHHHHhhcCCcceEeCCCCHHHHHHH
Confidence 45666665553 4777664332 3 34455666665432223345666554433222 235799999999999999
Q ss_pred HHHHhcCC
Q 005855 521 IARALNMS 528 (673)
Q Consensus 521 I~~aL~m~ 528 (673)
|.+++.-.
T Consensus 117 i~~~~~~~ 124 (132)
T 2rdm_A 117 VSQLLNAR 124 (132)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 99988643
No 245
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=27.84 E-value=2e+02 Score=28.72 Aligned_cols=73 Identities=12% Similarity=0.176 Sum_probs=44.7
Q ss_pred eCCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc----cCceEEE-CC------C
Q 005855 444 LDRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL----GAGAILV-NP------W 512 (673)
Q Consensus 444 ~~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l----g~~gllV-nP------~ 512 (673)
+.+..+-.|+.++++.||++|-+-. |.+-+ |.|.+ .|+| +=|+...+.. +.....+ .+ -
T Consensus 238 l~g~~sl~el~ali~~a~l~I~~DS----G~~Hl-Aaa~g----~P~v-~lfg~t~p~~~~P~~~~~~~~~~~~~cm~~I 307 (326)
T 2gt1_A 238 VLPKMSLEGVARVLAGAKFVVSVDT----GLSHL-TAALD----RPNI-TVYGPTDPGLIGGYGKNQMVCRAPGNELSQL 307 (326)
T ss_dssp ECCCCCHHHHHHHHHTCSEEEEESS----HHHHH-HHHTT----CCEE-EEESSSCHHHHCCCSSSEEEEECGGGCGGGC
T ss_pred ccCCCCHHHHHHHHHhCCEEEecCC----cHHHH-HHHcC----CCEE-EEECCCChhhcCCCCCCceEecCCcccccCC
Confidence 4688899999999999999998732 45556 45553 3433 2233222222 3333333 22 2
Q ss_pred CHHHHHHHHHHHhc
Q 005855 513 NITEVANAIARALN 526 (673)
Q Consensus 513 D~~~lA~aI~~aL~ 526 (673)
+++++.+++.++|+
T Consensus 308 ~~~~V~~~i~~~l~ 321 (326)
T 2gt1_A 308 TANAVKQFIEENAE 321 (326)
T ss_dssp CHHHHHHHHHHTTT
T ss_pred CHHHHHHHHHHHHH
Confidence 67888888877775
No 246
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=27.72 E-value=1.2e+02 Score=26.27 Aligned_cols=78 Identities=21% Similarity=0.239 Sum_probs=47.8
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-----cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-----g~~gllVnP~D~~~lA~a 520 (673)
+.++...++.. .|++++--. -+.-|+-.++.+........++++|......... |..+++..|.+.+++..+
T Consensus 39 ~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~ 118 (153)
T 3cz5_A 39 DAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDPAELVQA 118 (153)
T ss_dssp SHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEETTSCTTHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHHCCCcEEEecCCCHHHHHHH
Confidence 44555555544 477666433 2334455566655432223355666655432221 677899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 119 i~~~~~ 124 (153)
T 3cz5_A 119 IEAILA 124 (153)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 999986
No 247
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=27.64 E-value=1.9e+02 Score=24.94 Aligned_cols=78 Identities=14% Similarity=0.218 Sum_probs=47.7
Q ss_pred CHHHHHHHHHH--cCEEEEcC-CCcCCChhHHHHHhhccC-CCc-eEEEeCCCCchhh---c--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTS-LRDGMNLVSYEFVACQDL-KKG-VLILSEFAGAAQS---L--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~S-l~EGf~Lv~lEamA~~~~-~~g-~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA 518 (673)
+.++...++.. .|++++-. +-+.-|+-.++.+-.... ... ++++|........ + |..+++..|.+.+++.
T Consensus 39 ~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~ 118 (154)
T 3gt7_A 39 NGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPCKDVVLA 118 (154)
T ss_dssp SHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCCHHHHH
Confidence 44555555543 46666543 334445666666654321 123 4555654433222 1 6788999999999999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
.+|..++.
T Consensus 119 ~~i~~~l~ 126 (154)
T 3gt7_A 119 SHVKRLLS 126 (154)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999985
No 248
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=27.33 E-value=2.1e+02 Score=23.69 Aligned_cols=68 Identities=16% Similarity=0.214 Sum_probs=42.7
Q ss_pred cCEEEEcCC-CcCCChhHHHHHhhcc--CCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHHHHHHhcC
Q 005855 460 TDVALVTSL-RDGMNLVSYEFVACQD--LKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAIARALNM 527 (673)
Q Consensus 460 ADv~vv~Sl-~EGf~Lv~lEamA~~~--~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~aI~~aL~m 527 (673)
.|++++--. -+.=|+-.++.+-... ..-.++++|........ + |..+++..|.+.+++.++|..++.-
T Consensus 52 ~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 52 TKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp CCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHHCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHhcc
Confidence 577665433 2333556666664321 11234566665543322 2 6789999999999999999998863
No 249
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=27.14 E-value=1.7e+02 Score=27.96 Aligned_cols=77 Identities=10% Similarity=0.140 Sum_probs=45.6
Q ss_pred HHHHHHHHHH--cCEEEEcC-CCcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-----cCceEEECCCCHHHHHHHH
Q 005855 450 FPALCALYAV--TDVALVTS-LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANAI 521 (673)
Q Consensus 450 ~~el~aly~~--ADv~vv~S-l~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-----g~~gllVnP~D~~~lA~aI 521 (673)
.++...++.. .|++++=- +-+.=|+-.++.+-.....-.++++|......... |..+++..|.+.+++..+|
T Consensus 56 ~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~Kp~~~~~L~~~i 135 (250)
T 3r0j_A 56 GAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARL 135 (250)
T ss_dssp HHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECSTTHHHHHHHHTSTTCEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHH
Confidence 3444444332 46555432 23334455566555432223456677665443322 6789999999999999999
Q ss_pred HHHhc
Q 005855 522 ARALN 526 (673)
Q Consensus 522 ~~aL~ 526 (673)
..++.
T Consensus 136 ~~~~~ 140 (250)
T 3r0j_A 136 RVILR 140 (250)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88874
No 250
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=27.08 E-value=1.3e+02 Score=25.77 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=44.4
Q ss_pred CHHHHHHHHHH---cCEEEEcCCC-cCCChhHHHHHhhccCCCce-EEEeCCCCchh---hc--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV---TDVALVTSLR-DGMNLVSYEFVACQDLKKGV-LILSEFAGAAQ---SL--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~---ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~-lVlSe~aG~~~---~l--g~~gllVnP~D~~~lA 518 (673)
+.++...++.. .|++++--.. +.-|+-.++.+..... ..| +++|....... .+ |..+++..|.+.+++.
T Consensus 37 ~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~-~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~ 115 (154)
T 2qsj_A 37 TVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDP-SNAVALISGETDHELIRAALEAGADGFIPKSADPQVLI 115 (154)
T ss_dssp SHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCT-TSEEEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHH
T ss_pred CHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCC-CCeEEEEeCCCCHHHHHHHHHccCCEEEeCCCCHHHHH
Confidence 45666666655 5777765432 3335666666654322 234 44454432221 11 6678999999999999
Q ss_pred HHHHHHhcC
Q 005855 519 NAIARALNM 527 (673)
Q Consensus 519 ~aI~~aL~m 527 (673)
++|..++.-
T Consensus 116 ~~l~~~~~~ 124 (154)
T 2qsj_A 116 HAVSLILEG 124 (154)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999863
No 251
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=27.08 E-value=2.9e+02 Score=23.48 Aligned_cols=77 Identities=10% Similarity=0.025 Sum_probs=46.6
Q ss_pred CHHHHHHHHH---------HcCEEEEcCCCcC-CChhHHHHHhhcc--CCCceEEEeCCCCchhh---c--cCceEEECC
Q 005855 449 DFPALCALYA---------VTDVALVTSLRDG-MNLVSYEFVACQD--LKKGVLILSEFAGAAQS---L--GAGAILVNP 511 (673)
Q Consensus 449 ~~~el~aly~---------~ADv~vv~Sl~EG-f~Lv~lEamA~~~--~~~g~lVlSe~aG~~~~---l--g~~gllVnP 511 (673)
+..+...++. ..|++++=-...| =|+-.++.+.... ..-.++++|........ + |..+++..|
T Consensus 42 ~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~KP 121 (149)
T 1i3c_A 42 DGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKS 121 (149)
T ss_dssp SHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECC
T ss_pred CHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEEECC
Confidence 4456666665 3587776543333 2455566664421 11234566665443221 2 677899999
Q ss_pred CCHHHHHHHHHHHh
Q 005855 512 WNITEVANAIARAL 525 (673)
Q Consensus 512 ~D~~~lA~aI~~aL 525 (673)
.+.+++.++|..++
T Consensus 122 ~~~~~L~~~i~~~~ 135 (149)
T 1i3c_A 122 RNLKDLFKMVQGIE 135 (149)
T ss_dssp SSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 99999999998775
No 252
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=26.99 E-value=1.7e+02 Score=23.83 Aligned_cols=77 Identities=16% Similarity=0.204 Sum_probs=45.3
Q ss_pred CHHHHHHHHHH--cCEEEEcCCCcC-CChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~EG-f~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+..+...++.. .|++++--...+ -|+-.++.+-.. ....++++|........ + |..+++..|.+.+++..+
T Consensus 35 ~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~-~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~ 113 (123)
T 1xhf_A 35 DGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQ-ANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIR 113 (123)
T ss_dssp SHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHH-CCCEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhC-CCCcEEEEECCCChHHHHHHHhcCcceEEeCCCCHHHHHHH
Confidence 34555555443 477765433222 345555555432 12234556665543322 2 678899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 114 i~~~~~ 119 (123)
T 1xhf_A 114 ARNLLS 119 (123)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988763
No 253
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=26.72 E-value=1.7e+02 Score=24.16 Aligned_cols=78 Identities=10% Similarity=0.008 Sum_probs=48.0
Q ss_pred CHHHHHHHHHH---------cCEEEEcCCC-cCCChhHHHHHhhcc--CCCceEEEeCCCCchhh---c--cCceEEECC
Q 005855 449 DFPALCALYAV---------TDVALVTSLR-DGMNLVSYEFVACQD--LKKGVLILSEFAGAAQS---L--GAGAILVNP 511 (673)
Q Consensus 449 ~~~el~aly~~---------ADv~vv~Sl~-EGf~Lv~lEamA~~~--~~~g~lVlSe~aG~~~~---l--g~~gllVnP 511 (673)
+.++...++.. .|++++--.. +.-|+-.++.+.... ..-.++++|........ + |..+++..|
T Consensus 36 ~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP 115 (140)
T 1k68_A 36 DGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKS 115 (140)
T ss_dssp SHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECC
T ss_pred CHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhheecCC
Confidence 45666666653 6777765433 333455566655432 12234556655432221 1 677899999
Q ss_pred CCHHHHHHHHHHHhc
Q 005855 512 WNITEVANAIARALN 526 (673)
Q Consensus 512 ~D~~~lA~aI~~aL~ 526 (673)
.+.+++..+|..++.
T Consensus 116 ~~~~~l~~~i~~~~~ 130 (140)
T 1k68_A 116 ANLSQLFQIVKGIEE 130 (140)
T ss_dssp SSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999998874
No 254
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=26.50 E-value=1.5e+02 Score=24.91 Aligned_cols=78 Identities=8% Similarity=0.016 Sum_probs=46.0
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhc-cCCCc-eEEEeCCCCchh---hc--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQ-DLKKG-VLILSEFAGAAQ---SL--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~-~~~~g-~lVlSe~aG~~~---~l--g~~gllVnP~D~~~lA 518 (673)
+.++...+++. .|++++--. -+.-|+-.++.+... ..... ++++|....... .+ |..+++..|.+.+++.
T Consensus 39 ~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~ 118 (142)
T 3cg4_A 39 SGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLI 118 (142)
T ss_dssp SHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHHH
Confidence 44565565554 466665433 333456666666541 11123 345555433221 12 5568999999999999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
++|..++.
T Consensus 119 ~~i~~~~~ 126 (142)
T 3cg4_A 119 EKTTFFMG 126 (142)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998884
No 255
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=26.05 E-value=62 Score=31.21 Aligned_cols=22 Identities=14% Similarity=0.295 Sum_probs=14.2
Q ss_pred HHHHHhhccCeEEEEccccccc
Q 005855 582 SIERYLRSNNRLLILGFNATLT 603 (673)
Q Consensus 582 ~~~~y~~s~~rll~lDyDGTL~ 603 (673)
....+.....+.+++.+++.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~ 136 (280)
T 3skx_A 115 SVEKLKQQGKTVVFILKNGEVS 136 (280)
T ss_dssp THHHHHTTTCEEEEEEETTEEE
T ss_pred HHHHHHhCCCeEEEEEECCEEE
Confidence 3445555666777778887763
No 256
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=25.85 E-value=2e+02 Score=23.65 Aligned_cols=79 Identities=10% Similarity=0.076 Sum_probs=46.2
Q ss_pred CHHHHHHHHHH--cCEEEEcC-CCcCCChhHHHHHhhccC-CCceEEEeCCCCchh---hc--cCceEEECCCCHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTS-LRDGMNLVSYEFVACQDL-KKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVAN 519 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~S-l~EGf~Lv~lEamA~~~~-~~g~lVlSe~aG~~~---~l--g~~gllVnP~D~~~lA~ 519 (673)
+.++....++. .|++++-. +-+.-|+-.++.+-.... ...++|++....... .+ |..+++..|.+.+++.+
T Consensus 38 ~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~ 117 (132)
T 3lte_A 38 NGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYLEKPFDNDALLD 117 (132)
T ss_dssp SHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEECSSCCHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHhhCCCCHHHHHH
Confidence 34555554443 46666543 334445666776654321 223444443332222 12 67889999999999999
Q ss_pred HHHHHhcC
Q 005855 520 AIARALNM 527 (673)
Q Consensus 520 aI~~aL~m 527 (673)
+|.+.+.-
T Consensus 118 ~i~~~~~~ 125 (132)
T 3lte_A 118 RIHDLVNE 125 (132)
T ss_dssp HHHHHHC-
T ss_pred HHHHHcCC
Confidence 99998863
No 257
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=25.84 E-value=1.4e+02 Score=25.02 Aligned_cols=79 Identities=16% Similarity=0.250 Sum_probs=46.6
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC------cCCChhHHHHHhhccCCCceEEEeCCCCchh---hc--cCceEEECCCCHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR------DGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNIT 515 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~------EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~---~l--g~~gllVnP~D~~ 515 (673)
+.++...++.. .|++++--.. +.-|+-.++.+......-.++++|....... .+ |..+++..|.+.+
T Consensus 35 ~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~ 114 (140)
T 2qr3_A 35 SPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGASDFVVKPWDNQ 114 (140)
T ss_dssp CHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTCCEEEEESCCHH
T ss_pred CHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHHHcCchheeeCCCCHH
Confidence 44566665554 4666654322 3334555555543222223455555443221 11 6678999999999
Q ss_pred HHHHHHHHHhcC
Q 005855 516 EVANAIARALNM 527 (673)
Q Consensus 516 ~lA~aI~~aL~m 527 (673)
++.++|..++..
T Consensus 115 ~l~~~l~~~~~~ 126 (140)
T 2qr3_A 115 KLLETLLNAASQ 126 (140)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHh
Confidence 999999999864
No 258
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=25.79 E-value=2.4e+02 Score=23.08 Aligned_cols=78 Identities=12% Similarity=0.122 Sum_probs=44.7
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhcc-CCC-ceEEEeCCCCchhh---c--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQD-LKK-GVLILSEFAGAAQS---L--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~~-~~~-g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA 518 (673)
+..+...++.. .|++++--.. +.-|+-.++.+-... ... .++++|........ + |..+++..|.+.+++.
T Consensus 37 ~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~ 116 (128)
T 1jbe_A 37 DGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLE 116 (128)
T ss_dssp SHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCceeecCCCHHHHH
Confidence 34555555443 4776654332 223455556554311 112 24556655433221 2 6778999999999999
Q ss_pred HHHHHHhc
Q 005855 519 NAIARALN 526 (673)
Q Consensus 519 ~aI~~aL~ 526 (673)
++|..++.
T Consensus 117 ~~i~~~~~ 124 (128)
T 1jbe_A 117 EKLNKIFE 124 (128)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988873
No 259
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=25.56 E-value=1.7e+02 Score=24.57 Aligned_cols=78 Identities=10% Similarity=0.084 Sum_probs=47.7
Q ss_pred CHHHHHHHHHH------------cCEEEEcCCC-cCCChhHHHHHhhcc--CCCceEEEeCCCCchhh---c--cCceEE
Q 005855 449 DFPALCALYAV------------TDVALVTSLR-DGMNLVSYEFVACQD--LKKGVLILSEFAGAAQS---L--GAGAIL 508 (673)
Q Consensus 449 ~~~el~aly~~------------ADv~vv~Sl~-EGf~Lv~lEamA~~~--~~~g~lVlSe~aG~~~~---l--g~~gll 508 (673)
+.++...++.. .|++++--.. +.-|+-.++.+.... ..-.++++|........ + |..+++
T Consensus 40 ~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l 119 (149)
T 1k66_A 40 TGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYI 119 (149)
T ss_dssp SHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEE
Confidence 45666666653 5777765433 333455666665432 12234556655432221 1 667899
Q ss_pred ECCCCHHHHHHHHHHHhc
Q 005855 509 VNPWNITEVANAIARALN 526 (673)
Q Consensus 509 VnP~D~~~lA~aI~~aL~ 526 (673)
..|.+.+++.++|..++.
T Consensus 120 ~kP~~~~~l~~~i~~~~~ 137 (149)
T 1k66_A 120 VKPLEIDRLTETVQTFIK 137 (149)
T ss_dssp ECCSSHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHH
Confidence 999999999999998873
No 260
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=25.11 E-value=1.2e+02 Score=25.57 Aligned_cols=79 Identities=11% Similarity=0.176 Sum_probs=45.7
Q ss_pred CHHHHHHHHHH--cCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAI 521 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~aI 521 (673)
+.++...++.. .|++++-..-+.-|+-.++.+......-.++++|........ + |..+++..|.+.+++..+|
T Consensus 36 ~~~~a~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i 115 (142)
T 2qxy_A 36 NEQEAFTFLRREKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYILKPFRLDYLLERV 115 (142)
T ss_dssp SHHHHHHHHTTSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEEESSCCHHHHHHHH
T ss_pred CHHHHHHHHhccCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeEeCCCCHHHHHHHH
Confidence 34555555543 467666542222234444444332222234556655443221 1 6778999999999999999
Q ss_pred HHHhcC
Q 005855 522 ARALNM 527 (673)
Q Consensus 522 ~~aL~m 527 (673)
..++..
T Consensus 116 ~~~~~~ 121 (142)
T 2qxy_A 116 KKIISS 121 (142)
T ss_dssp HHHHHC
T ss_pred HHHHhh
Confidence 999864
No 261
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=25.01 E-value=80 Score=27.96 Aligned_cols=38 Identities=18% Similarity=0.433 Sum_probs=28.0
Q ss_pred eEEEeCCCCchhhc-----cCceEEECCCCHHHHHHHHHHHhc
Q 005855 489 VLILSEFAGAAQSL-----GAGAILVNPWNITEVANAIARALN 526 (673)
Q Consensus 489 ~lVlSe~aG~~~~l-----g~~gllVnP~D~~~lA~aI~~aL~ 526 (673)
++++|..+...... |..+++.-|.+.+++.++|.++|.
T Consensus 90 vI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 90 VLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp EEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 34556555433222 778999999999999999998874
No 262
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=24.77 E-value=92 Score=28.15 Aligned_cols=7 Identities=29% Similarity=0.596 Sum_probs=3.2
Q ss_pred EEEcCCC
Q 005855 643 VVLSGSD 649 (673)
Q Consensus 643 ~ViSGR~ 649 (673)
.|+||..
T Consensus 119 ~i~~~~~ 125 (180)
T 3bwv_A 119 FVFCGRK 125 (180)
T ss_dssp EEECSCG
T ss_pred EEEeCCc
Confidence 3445543
No 263
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=24.62 E-value=28 Score=34.74 Aligned_cols=16 Identities=25% Similarity=0.187 Sum_probs=13.4
Q ss_pred CeEEEEcccccccCCC
Q 005855 591 NRLLILGFNATLTEPV 606 (673)
Q Consensus 591 ~rll~lDyDGTL~~~~ 606 (673)
-+.++||.||||+...
T Consensus 32 i~~viFD~dGTL~ds~ 47 (287)
T 3a1c_A 32 VTAVIFDKTGTLTKGK 47 (287)
T ss_dssp CCEEEEECCCCCBCSC
T ss_pred CCEEEEeCCCCCcCCC
Confidence 4689999999999853
No 264
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=24.51 E-value=2.1e+02 Score=23.91 Aligned_cols=79 Identities=11% Similarity=0.016 Sum_probs=49.8
Q ss_pred CHHHHHHHHHH-------cCEEEEcC-CCcCCChhHHHHHhh----ccCCCceEEEeCCCCchhh---c--c-CceEEEC
Q 005855 449 DFPALCALYAV-------TDVALVTS-LRDGMNLVSYEFVAC----QDLKKGVLILSEFAGAAQS---L--G-AGAILVN 510 (673)
Q Consensus 449 ~~~el~aly~~-------ADv~vv~S-l~EGf~Lv~lEamA~----~~~~~g~lVlSe~aG~~~~---l--g-~~gllVn 510 (673)
+.++...++.. .|++++-- +-+.-|+..++.+.. ......++++|........ + | ..+++..
T Consensus 43 ~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~K 122 (146)
T 3ilh_A 43 SGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSK 122 (146)
T ss_dssp SHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECS
T ss_pred CHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceeeeC
Confidence 45666666655 57776653 334455666776655 1122234555554433222 1 5 6679999
Q ss_pred CCCHHHHHHHHHHHhcC
Q 005855 511 PWNITEVANAIARALNM 527 (673)
Q Consensus 511 P~D~~~lA~aI~~aL~m 527 (673)
|.+.+++.++|.+.+.-
T Consensus 123 P~~~~~L~~~i~~~~~~ 139 (146)
T 3ilh_A 123 PLTANALNNLYNKVLNE 139 (146)
T ss_dssp SCCHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 99999999999999864
No 265
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=24.31 E-value=78 Score=26.97 Aligned_cols=77 Identities=12% Similarity=0.151 Sum_probs=45.6
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+..+...++.. .|++++--.. +.-|+-.++.+.... ...++++|........ + |..+++..|.+.+++..+
T Consensus 36 ~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~-~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 114 (136)
T 2qzj_A 36 NCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVT-TCPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAK 114 (136)
T ss_dssp SHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTC-CCCEEEEESCCCHHHHHHHHHTTCCEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCC-CCCEEEEEcCCCHHHHHHHHHcCCcEEEECCCCHHHHHHH
Confidence 34555555543 4776654322 223445556554322 2234566665543221 2 677999999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 115 l~~~~~ 120 (136)
T 2qzj_A 115 VKAILR 120 (136)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988874
No 266
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=24.29 E-value=30 Score=34.77 Aligned_cols=39 Identities=15% Similarity=0.265 Sum_probs=30.1
Q ss_pred cCCChhHHHHHHHHhcCCCCeEEEEcCCCHHhHHHHhccc
Q 005855 621 LKLHPDLKQPLNALCHDPKTTIVVLSGSDRNVLDKVLDLV 660 (673)
Q Consensus 621 ~~p~~~~~~~L~~L~~d~~n~V~ViSGR~~~~L~~~~~~~ 660 (673)
.++.+++.++++.|.+. ...|+|+||--...++......
T Consensus 140 i~l~~g~~e~i~~l~~~-gi~v~ivSgg~~~~i~~i~~~~ 178 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQQH-GIPVFIFSAGIGDVLEEVIRQA 178 (297)
T ss_dssp CCBCBTHHHHHHHHHHT-TCCEEEEEEEEHHHHHHHHHHT
T ss_pred CCCCCcHHHHHHHHHHc-CCeEEEEeCCcHHHHHHHHHHc
Confidence 45678889999888775 5789999998887777666543
No 267
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=24.10 E-value=2.2e+02 Score=23.00 Aligned_cols=80 Identities=10% Similarity=0.085 Sum_probs=46.0
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-C-cCCChhHHHHHhhcc-CCCceEEEeCCCCchh---hc--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-R-DGMNLVSYEFVACQD-LKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~-EGf~Lv~lEamA~~~-~~~g~lVlSe~aG~~~---~l--g~~gllVnP~D~~~lA 518 (673)
+.++...++.. .|++++-.. - +.-|+-.++.+.... ....|+|+-....... .+ |..+++..|.+.+++.
T Consensus 37 ~~~~a~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~ 116 (127)
T 2gkg_A 37 DGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVIIGNPDGFAQHRKLKAHADEYVAKPVDADQLV 116 (127)
T ss_dssp CHHHHHHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEEECGGGHHHHHHSTTCCSEEEESSCCHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEEecCCchhHHHHHHhCcchheeCCCCHHHHH
Confidence 34555444443 577665432 2 333455666665431 1234444432222111 12 5678999999999999
Q ss_pred HHHHHHhcCC
Q 005855 519 NAIARALNMS 528 (673)
Q Consensus 519 ~aI~~aL~m~ 528 (673)
.+|..++..+
T Consensus 117 ~~i~~~~~~~ 126 (127)
T 2gkg_A 117 ERAGALIGFP 126 (127)
T ss_dssp HHHHHHHCCC
T ss_pred HHHHHHHcCC
Confidence 9999998765
No 268
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=23.96 E-value=3.2e+02 Score=29.31 Aligned_cols=108 Identities=12% Similarity=-0.006 Sum_probs=63.4
Q ss_pred CCCCCHHHHHHHHHHcCEEEEcCCCcCCChhHHHHHhhccCCCceEEEeCCCC-----c---hhhccCceEEECC-----
Q 005855 445 DRSLDFPALCALYAVTDVALVTSLRDGMNLVSYEFVACQDLKKGVLILSEFAG-----A---AQSLGAGAILVNP----- 511 (673)
Q Consensus 445 ~~~v~~~el~aly~~ADv~vv~Sl~EGf~Lv~lEamA~~~~~~g~lVlSe~aG-----~---~~~lg~~gllVnP----- 511 (673)
.+.+++. .+++.++|.++=+ +-|+| +.+|++++| .|+|+--+.+ + .+.+ .-|+.++.
T Consensus 344 ~~w~Pq~---~vL~h~~v~~fvt-HgG~~-S~~Eal~~G----vP~i~~P~~~DQ~~na~~l~~~~-G~g~~l~~~~~~~ 413 (480)
T 2vch_A 344 PFWAPQA---QVLAHPSTGGFLT-HCGWN-STLESVVSG----IPLIAWPLYAEQKMNAVLLSEDI-RAALRPRAGDDGL 413 (480)
T ss_dssp ESCCCHH---HHHHSTTEEEEEE-CCCHH-HHHHHHHHT----CCEEECCCSTTHHHHHHHHHHTT-CCEECCCCCTTSC
T ss_pred eCccCHH---HHhCCCCcCeEEe-cccch-hHHHHHHcC----CCEEeccccccchHHHHHHHHHh-CeEEEeecccCCc
Confidence 4567764 7788899633222 45665 468999994 6666654421 0 1122 34566654
Q ss_pred CCHHHHHHHHHHHhcCCH-HHHHHHHHHhhHHHhh-----CCHHHHHHHHHHHHHHh
Q 005855 512 WNITEVANAIARALNMSP-EEREKRHWHNFTHVTT-----HTAQEWAETFVSELNDT 562 (673)
Q Consensus 512 ~D~~~lA~aI~~aL~m~~-~er~~r~~~~~~~v~~-----~~~~~W~~~fl~~L~~~ 562 (673)
.+.++++++|.++|+..+ .+-+++.+++.+.+++ -+...=.++|++.++..
T Consensus 414 ~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~~ 470 (480)
T 2vch_A 414 VRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKAH 470 (480)
T ss_dssp CCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 378999999999997432 2334444444444433 22344566777777663
No 269
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=23.85 E-value=1.5e+02 Score=23.93 Aligned_cols=65 Identities=23% Similarity=0.258 Sum_probs=39.2
Q ss_pred cCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHHHHHHh
Q 005855 460 TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANAIARAL 525 (673)
Q Consensus 460 ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~aI~~aL 525 (673)
.|++++--.. +.-|+-.++.+... ....++++|........ + |..+++..|.+.+++..+|..++
T Consensus 46 ~dlvi~D~~l~~~~g~~~~~~l~~~-~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~ 116 (121)
T 1zh2_A 46 PDLIILDLGLPDGDGIEFIRDLRQW-SAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVAL 116 (121)
T ss_dssp CSEEEEESEETTEEHHHHHHHHHTT-CCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHhC-CCCcEEEEECCCCHHHHHHHHhcCCCeEEeCCcCHHHHHHHHHHHH
Confidence 5776653222 22244555655421 22234566665543322 2 67799999999999999998876
No 270
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=23.72 E-value=3.2e+02 Score=22.78 Aligned_cols=78 Identities=14% Similarity=0.188 Sum_probs=44.6
Q ss_pred CHHHHHHHHHH--cCEEEEcCCCcC-CChhHHHHHhhccCCCceEEEeCCCCchh---hc--c-CceEEECCCCHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLRDG-MNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--G-AGAILVNPWNITEVAN 519 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~EG-f~Lv~lEamA~~~~~~g~lVlSe~aG~~~---~l--g-~~gllVnP~D~~~lA~ 519 (673)
+..+...++.. .|++++--...| -|+-.++.+........++++|....... .+ | ..+++..|.+.+++..
T Consensus 32 ~~~~a~~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~ 111 (139)
T 2jk1_A 32 GAEAAIAILEEEWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYTDSASMMAAINDAGIHQFLTKPWHPEQLLS 111 (139)
T ss_dssp SHHHHHHHHHHSCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCTTCHHHHHHHHHTTCCEEEESSCCHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCCChHHHHHHHHhhchhhhccCCCCHHHHHH
Confidence 34555555544 466665432222 24445555543212223456665554322 22 2 5689999999999999
Q ss_pred HHHHHhc
Q 005855 520 AIARALN 526 (673)
Q Consensus 520 aI~~aL~ 526 (673)
+|..++.
T Consensus 112 ~i~~~~~ 118 (139)
T 2jk1_A 112 SARNAAR 118 (139)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998885
No 271
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=23.68 E-value=2.1e+02 Score=26.22 Aligned_cols=78 Identities=14% Similarity=0.120 Sum_probs=47.1
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhhc-----cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQSL-----GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~l-----g~~gllVnP~D~~~lA~a 520 (673)
+.++...++.. .|++++--. -+.-|+-.++.+-.......++++|......... |..+++..|.+.+++..+
T Consensus 39 ~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~ 118 (215)
T 1a04_A 39 NGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 118 (215)
T ss_dssp SHHHHHHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECCCCHHHHHHHHHTTCSEEEETTCCHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHHHHHH
Confidence 34454444443 477665432 2333556666665432223346666654433222 678999999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 119 i~~~~~ 124 (215)
T 1a04_A 119 LHQAAA 124 (215)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 998875
No 272
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=23.19 E-value=1.7e+02 Score=24.00 Aligned_cols=77 Identities=14% Similarity=0.196 Sum_probs=44.4
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...++.. .|++++--. -+.=|+-.++.+.... .-.++++|........ + |..+++..|.+.+++..+
T Consensus 34 ~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~-~~~ii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~ 112 (120)
T 3f6p_A 34 DGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKY-DMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLAR 112 (120)
T ss_dssp SHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTC-CSCEEEEEESSCHHHHHHHHHTTCCEEEEESCCHHHHHHH
T ss_pred CHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcC-CCCEEEEECCCChHHHHHHHhCCcceeEcCCCCHHHHHHH
Confidence 44555555443 466555332 2223344555554322 2234555654443222 2 678899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 113 i~~~l~ 118 (120)
T 3f6p_A 113 VKANLR 118 (120)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998875
No 273
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=23.12 E-value=1e+02 Score=26.04 Aligned_cols=79 Identities=9% Similarity=0.203 Sum_probs=46.8
Q ss_pred CHHHHHHHHHH---cCEEEEcCCCc--CCChhHHHHHhh--ccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHH
Q 005855 449 DFPALCALYAV---TDVALVTSLRD--GMNLVSYEFVAC--QDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITE 516 (673)
Q Consensus 449 ~~~el~aly~~---ADv~vv~Sl~E--Gf~Lv~lEamA~--~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~ 516 (673)
+.++...++.. .|++++--... .=|+-.++.+.. ......++++|........ + |..+++..|.+.++
T Consensus 37 ~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~ 116 (140)
T 3lua_A 37 NLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYILKPYPTKR 116 (140)
T ss_dssp SHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCCTTH
T ss_pred CHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHH
Confidence 34555555544 56666543322 234555555544 2222334566655433221 1 67889999999999
Q ss_pred HHHHHHHHhcC
Q 005855 517 VANAIARALNM 527 (673)
Q Consensus 517 lA~aI~~aL~m 527 (673)
+.++|..++.-
T Consensus 117 l~~~i~~~~~~ 127 (140)
T 3lua_A 117 LENSVRSVLKI 127 (140)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHHh
Confidence 99999999864
No 274
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=23.06 E-value=1.9e+02 Score=26.36 Aligned_cols=78 Identities=10% Similarity=0.113 Sum_probs=45.6
Q ss_pred CHHHHHHHHHH--cCEEEEcC-CCcCCChhHHHHHhhccCCCceEEEeCCCCchh---hc--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTS-LRDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~S-l~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~---~l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...++.. .|++++=- .-+.-|+-.++.+-.....-.++++|....... .+ |..+++..|.+.+++..+
T Consensus 36 ~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~a~~~Ga~~~l~Kp~~~~~L~~~ 115 (208)
T 1yio_A 36 CASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDA 115 (208)
T ss_dssp SHHHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESCTTSCCCHHHHHTTEEEEEESSCCHHHHHHH
T ss_pred CHHHHHHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHH
Confidence 34444444332 35655432 233345566666654322233456665543222 22 667899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 116 i~~~~~ 121 (208)
T 1yio_A 116 IEQGLQ 121 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999885
No 275
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=22.87 E-value=2.8e+02 Score=23.26 Aligned_cols=79 Identities=15% Similarity=0.111 Sum_probs=47.2
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhcc-CCCc-eEEEeCCCCchhh---c--cCceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQD-LKKG-VLILSEFAGAAQS---L--GAGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~~-~~~g-~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA 518 (673)
+.++...++.. .|++++--.. +.=|+-.++.+-... .... ++++|........ + |..+++..|.+.+++.
T Consensus 36 ~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~ 115 (136)
T 3t6k_A 36 SGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYLAKPFEPQELV 115 (136)
T ss_dssp SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEEETTCCHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEEeCCCCHHHHH
Confidence 44555554443 4766654332 333455566554321 1122 4556665543322 2 6788999999999999
Q ss_pred HHHHHHhcC
Q 005855 519 NAIARALNM 527 (673)
Q Consensus 519 ~aI~~aL~m 527 (673)
.+|..++..
T Consensus 116 ~~i~~~l~~ 124 (136)
T 3t6k_A 116 YRVKNILAR 124 (136)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 999999864
No 276
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=22.75 E-value=1.2e+02 Score=25.18 Aligned_cols=80 Identities=15% Similarity=0.292 Sum_probs=46.6
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhc-cCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQ-DLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVAN 519 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~-~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~ 519 (673)
+.++...++.. .|++++--.. +.=|+-.++.+... .....++++|........ + |..+++..|.+.+++.+
T Consensus 36 ~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~ 115 (130)
T 1dz3_A 36 NGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAH 115 (130)
T ss_dssp SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHHCSSCCEEEEEEETTCHHHHHHHHHTTCEEEEECSSCCTTHHH
T ss_pred CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCcEEEEecCCCHHHHHHHHHcCCCEEEeCCCCHHHHHH
Confidence 34555555443 4777654332 22345556655432 112224556655433221 2 66789999999999999
Q ss_pred HHHHHhcCC
Q 005855 520 AIARALNMS 528 (673)
Q Consensus 520 aI~~aL~m~ 528 (673)
+|..++.-.
T Consensus 116 ~i~~~~~~~ 124 (130)
T 1dz3_A 116 HIRQVYGKT 124 (130)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHhcCC
Confidence 999988643
No 277
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=22.63 E-value=2.5e+02 Score=26.01 Aligned_cols=77 Identities=18% Similarity=0.139 Sum_probs=45.8
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchh---hc--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~---~l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...++.. .|++++--. -+.-|+-.++.+......-.++++|....... .+ |..+++..|.+.+++..+
T Consensus 39 ~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~ 118 (233)
T 1ys7_A 39 DGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVAR 118 (233)
T ss_dssp SHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHH
Confidence 44555554443 477665432 23345556666654322233456665443322 12 667899999999999999
Q ss_pred HHHHh
Q 005855 521 IARAL 525 (673)
Q Consensus 521 I~~aL 525 (673)
|..++
T Consensus 119 i~~~~ 123 (233)
T 1ys7_A 119 VKALL 123 (233)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
No 278
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=22.53 E-value=2.2e+02 Score=23.64 Aligned_cols=77 Identities=12% Similarity=0.053 Sum_probs=46.2
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC--cCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR--DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVAN 519 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~--EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~ 519 (673)
+.++...++.. .|++++--.. +.-|+-.++.+... ....++++|........ + |..+++..|.+.+++..
T Consensus 42 ~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~ 120 (140)
T 3cg0_A 42 NGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAG-CNLPIIFITSSQDVETFQRAKRVNPFGYLAKPVAADTLHR 120 (140)
T ss_dssp SHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHH-SCCCEEEEECCCCHHHHHHHHTTCCSEEEEESCCHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhC-CCCCEEEEecCCCHHHHHHHHhcCCCEEEeCCCCHHHHHH
Confidence 34555555443 5777765433 23345555555443 22234556655443221 1 66789999999999999
Q ss_pred HHHHHhc
Q 005855 520 AIARALN 526 (673)
Q Consensus 520 aI~~aL~ 526 (673)
+|..++.
T Consensus 121 ~i~~~~~ 127 (140)
T 3cg0_A 121 SIEMAIH 127 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998884
No 279
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=22.35 E-value=1.4e+02 Score=24.64 Aligned_cols=69 Identities=13% Similarity=0.182 Sum_probs=41.3
Q ss_pred cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCc----hh----hc--cCceEEECCCCHHHHHHHHHHHhcCC
Q 005855 460 TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGA----AQ----SL--GAGAILVNPWNITEVANAIARALNMS 528 (673)
Q Consensus 460 ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~----~~----~l--g~~gllVnP~D~~~lA~aI~~aL~m~ 528 (673)
-|++++-.. -+.=|+-.++.+........++++|..... .+ .+ |..+++..|.+.+++.++|.+++.-.
T Consensus 47 ~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~l~~~~~~~ 126 (135)
T 3eqz_A 47 QDIIILDLMMPDMDGIEVIRHLAEHKSPASLILISGYDSGVLHSAETLALSCGLNVINTFTKPINTEVLTCFLTSLSNRQ 126 (135)
T ss_dssp TEEEEEECCTTTTHHHHHHHHHHHTTCCCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhCCCCCCEEEEEeccchhHHHHHHHHHHcCCCcceeeCCCCCHHHHHHHHHHHHhhc
Confidence 476665433 233345555555443222234556655432 01 22 34578999999999999999998754
No 280
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=22.17 E-value=4.4e+02 Score=23.80 Aligned_cols=77 Identities=21% Similarity=0.300 Sum_probs=45.2
Q ss_pred CHHHHHHHHHH--cCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchh---hc--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQ---SL--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~---~l--g~~gllVnP~D~~~lA~a 520 (673)
+..+...++.. .|++++--.. +.-|+-.++.+..... ..++++|....... .+ |..+++..|.+.+++..+
T Consensus 46 ~~~~al~~~~~~~~dlvi~D~~~p~~~g~~~~~~l~~~~~-~pii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~ 124 (205)
T 1s8n_A 46 DGQEAVELAELHKPDLVIMDVKMPRRDGIDAASEIASKRI-APIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPA 124 (205)
T ss_dssp SHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTC-SCEEEEEEGGGHHHHHTTGGGSCEEEEEESCCHHHHHHH
T ss_pred CHHHHHHHHhhcCCCEEEEeCCCCCCChHHHHHHHHhcCC-CCEEEEecCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHH
Confidence 34444444433 4766654322 3334555666544322 23455665443222 11 667899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 125 i~~~~~ 130 (205)
T 1s8n_A 125 IELAVS 130 (205)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999985
No 281
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=22.14 E-value=87 Score=33.96 Aligned_cols=84 Identities=14% Similarity=0.185 Sum_probs=53.2
Q ss_pred HHHhhccCeEEEEcccccccCCCCCCCC--------------CC----cccc--------ccccCCChhHHHHHHHHhcC
Q 005855 584 ERYLRSNNRLLILGFNATLTEPVDTPGR--------------RG----DQIR--------EMELKLHPDLKQPLNALCHD 637 (673)
Q Consensus 584 ~~y~~s~~rll~lDyDGTL~~~~~~p~~--------------~~----~~~~--------~~~~~p~~~~~~~L~~L~~d 637 (673)
++....++..|+||+|.||+...-.|-. .. -+++ ..-...-|.+.+.|+.|+.
T Consensus 19 ~rll~~~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls~- 97 (442)
T 3ef1_A 19 KRLRQEKRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISE- 97 (442)
T ss_dssp HHHHHTTCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHTT-
T ss_pred HHHHhcCCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHhC-
Confidence 3456677888999999999975433310 00 0010 1123445789999999995
Q ss_pred CCCeEEEEcCCCHHhHHHHhcccc--cceeeccc
Q 005855 638 PKTTIVVLSGSDRNVLDKVLDLVL--FIFFSGLL 669 (673)
Q Consensus 638 ~~n~V~ViSGR~~~~L~~~~~~~~--~~~~~~~~ 669 (673)
.-.|+|.|.....-.+..+..+. +.+|...+
T Consensus 98 -~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl 130 (442)
T 3ef1_A 98 -LYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRV 130 (442)
T ss_dssp -TEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCE
T ss_pred -CcEEEEEcCCCHHHHHHHHHHhccCCccccceE
Confidence 68999999999876555554432 33444433
No 282
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=22.11 E-value=3.1e+02 Score=22.90 Aligned_cols=80 Identities=14% Similarity=0.122 Sum_probs=47.8
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhcc-CCCc-eEEEeCCCCchhhc---c--CceEEECCCCHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQD-LKKG-VLILSEFAGAAQSL---G--AGAILVNPWNITEVA 518 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~-~~~g-~lVlSe~aG~~~~l---g--~~gllVnP~D~~~lA 518 (673)
+..+...++.. .|++++--. -+.-|+-.++.+.... .... ++++|......... | ..+++..|.+.+++.
T Consensus 35 ~~~~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~ 114 (138)
T 3c3m_A 35 SGEECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAKPLTPEEANEYGSYIEDYILKPTTHHQLY 114 (138)
T ss_dssp SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESSCCCHHHHHHTTTTCSEEEECCCHHHHHH
T ss_pred CHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECCCChHHHHHHhhcCHhheEeCCCCHHHHH
Confidence 44555555554 477665433 2334566667665421 1123 45566554333222 3 358999999999999
Q ss_pred HHHHHHhcCC
Q 005855 519 NAIARALNMS 528 (673)
Q Consensus 519 ~aI~~aL~m~ 528 (673)
.+|..++...
T Consensus 115 ~~i~~~~~~~ 124 (138)
T 3c3m_A 115 EAIEHVLARR 124 (138)
T ss_dssp HHHHHHHSCC
T ss_pred HHHHHHHHHh
Confidence 9999998653
No 283
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=21.35 E-value=2.6e+02 Score=22.32 Aligned_cols=77 Identities=14% Similarity=0.167 Sum_probs=44.5
Q ss_pred CHHHHHHHHH--HcCEEEEcCCC-cCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYA--VTDVALVTSLR-DGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~--~ADv~vv~Sl~-EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+..+...++. ..|++++--.. +.-|+-.++.+... ....++++|........ + |..+++..|.+.+++.++
T Consensus 33 ~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~-~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~ 111 (120)
T 2a9o_A 33 NGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKT-SSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQAR 111 (120)
T ss_dssp SHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHH-CCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHhC-CCCCEEEEecCCchHHHHHHHhCCHhheEeCCCCHHHHHHH
Confidence 3444444443 35776654332 22344455555432 12234556655443222 1 678999999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 112 i~~~~~ 117 (120)
T 2a9o_A 112 VKALLR 117 (120)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 988774
No 284
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=20.96 E-value=2.3e+02 Score=26.12 Aligned_cols=78 Identities=15% Similarity=0.178 Sum_probs=45.9
Q ss_pred CHHHHHHHHHH--cCEEEEcCC-CcCCChhHHHHHhhccCCCceEEEeCCCCchhh---c--cCceEEECCCCHHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTSL-RDGMNLVSYEFVACQDLKKGVLILSEFAGAAQS---L--GAGAILVNPWNITEVANA 520 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~Sl-~EGf~Lv~lEamA~~~~~~g~lVlSe~aG~~~~---l--g~~gllVnP~D~~~lA~a 520 (673)
+.++...++.. .|++++--. -+.-|+-.++.+-.......++++|........ + |..+++..|.+.+++..+
T Consensus 34 ~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~ 113 (225)
T 1kgs_A 34 DGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIAR 113 (225)
T ss_dssp SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHhCCccEEEeCCCCHHHHHHH
Confidence 34554444443 477665432 233345556655443222344566665532221 2 667899999999999999
Q ss_pred HHHHhc
Q 005855 521 IARALN 526 (673)
Q Consensus 521 I~~aL~ 526 (673)
|..++.
T Consensus 114 i~~~~~ 119 (225)
T 1kgs_A 114 VRALIR 119 (225)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988773
No 285
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=20.84 E-value=2.5e+02 Score=22.96 Aligned_cols=78 Identities=14% Similarity=0.091 Sum_probs=45.9
Q ss_pred CHHHHHHHHHH--cCEEEEcC-CCcCCChhHHHHHhhcc-CCCc-eEEEeCCCCch--hhc--cCceEEECCCCHHHHHH
Q 005855 449 DFPALCALYAV--TDVALVTS-LRDGMNLVSYEFVACQD-LKKG-VLILSEFAGAA--QSL--GAGAILVNPWNITEVAN 519 (673)
Q Consensus 449 ~~~el~aly~~--ADv~vv~S-l~EGf~Lv~lEamA~~~-~~~g-~lVlSe~aG~~--~~l--g~~gllVnP~D~~~lA~ 519 (673)
+.++...++.. .|++++-. +-+.=|+-.++.+.... .... ++++|...... ..+ |..+++..|.+.+++.+
T Consensus 35 ~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~ 114 (127)
T 3i42_A 35 SGTDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFAKNDLGKEACELFDFYLEKPIDIASLEP 114 (127)
T ss_dssp SHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-CTTCCHHHHHHCSEEEESSCCHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCcchhHHHHHHHhhHHheeCCCCHHHHHH
Confidence 45565555544 46666543 33444566666665431 1223 34555444332 122 66789999999999999
Q ss_pred HHHHHhc
Q 005855 520 AIARALN 526 (673)
Q Consensus 520 aI~~aL~ 526 (673)
++.....
T Consensus 115 ~i~~~~~ 121 (127)
T 3i42_A 115 ILQSIEG 121 (127)
T ss_dssp HHHHHC-
T ss_pred HHHHhhc
Confidence 9998875
No 286
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=20.42 E-value=1.3e+02 Score=35.29 Aligned_cols=77 Identities=19% Similarity=0.237 Sum_probs=48.2
Q ss_pred hHHHHHHHhhccCeEEEEcccccccCCC-CCCCCCCccccccccCCChhHHHHHHHHhc-CCCCeEEEEcCCCHHhHHHH
Q 005855 579 EADSIERYLRSNNRLLILGFNATLTEPV-DTPGRRGDQIREMELKLHPDLKQPLNALCH-DPKTTIVVLSGSDRNVLDKV 656 (673)
Q Consensus 579 ~~~~~~~y~~s~~rll~lDyDGTL~~~~-~~p~~~~~~~~~~~~~p~~~~~~~L~~L~~-d~~n~V~ViSGR~~~~L~~~ 656 (673)
+.++++.-+.+.--++++..+.....-. +++ ....+..-.++++++++ .|++.|++.||+.... .|
T Consensus 564 ~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~----------~l~LP~~Q~~LI~aV~a~~~~tVVVl~sG~pv~m--~w 631 (845)
T 3abz_A 564 IRNAAELAAKHDKAVLIIGLNGEWETEGYDRE----------NMDLPKRTNELVRAVLKANPNTVIVNQSGTPVEF--PW 631 (845)
T ss_dssp HHHHHHHHHTSSEEEEEEECCTTTSBTTBCCS----------SSCCCTTHHHHHHHHHHHCSCEEEEEECSSCCCC--TT
T ss_pred HHHHHHHHhcCCEEEEEEecCCccccccCCcc----------cccCCHHHHHHHHHHHHhCCCEEEEEeCCCcccC--cc
Confidence 3445555667777888887665543221 111 23334555566666655 4556668999999876 78
Q ss_pred hcccccceeec
Q 005855 657 LDLVLFIFFSG 667 (673)
Q Consensus 657 ~~~~~~~~~~~ 667 (673)
...++.|+.+.
T Consensus 632 ~~~v~AIL~aw 642 (845)
T 3abz_A 632 LEDANALVQAW 642 (845)
T ss_dssp GGGCSEEEECC
T ss_pred hhccCeEEEcC
Confidence 88888777654
No 287
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=20.38 E-value=2.7e+02 Score=23.66 Aligned_cols=77 Identities=21% Similarity=0.202 Sum_probs=46.4
Q ss_pred CHHHHHHHHH-----------HcCEEEEcC-CCcCCChhHHHHHhhc--cCCCceEEEeCCCCchhh---c--cCceEEE
Q 005855 449 DFPALCALYA-----------VTDVALVTS-LRDGMNLVSYEFVACQ--DLKKGVLILSEFAGAAQS---L--GAGAILV 509 (673)
Q Consensus 449 ~~~el~aly~-----------~ADv~vv~S-l~EGf~Lv~lEamA~~--~~~~g~lVlSe~aG~~~~---l--g~~gllV 509 (673)
+.++...++. ..|++++-- +-+.=|+-.++.+-.. ...-.++++|........ + |..+++.
T Consensus 38 ~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~ 117 (152)
T 3heb_A 38 DGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYIT 117 (152)
T ss_dssp SHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEe
Confidence 4556666553 356666543 3344456666666542 112234566655542221 2 6788999
Q ss_pred CCCCHHHHHHHHHHHh
Q 005855 510 NPWNITEVANAIARAL 525 (673)
Q Consensus 510 nP~D~~~lA~aI~~aL 525 (673)
.|.+.+++.++|.++.
T Consensus 118 KP~~~~~l~~~i~~~~ 133 (152)
T 3heb_A 118 KPVNYENFANAIRQLG 133 (152)
T ss_dssp CCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 9999999999998774
Done!