Your job contains 1 sequence.
>005857
MEGLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPP
KDGVFPRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTA
SHTYCVGMGNAVPEGDWFCHDCTVLRDEHDNAEIETDTETVFGDGSVSEVVVQNSDSEHN
NAETVAEIVNFGGSQEVVENSGSERSTVETVSDIVRTGGNQNTVECSGPDCIGADTIINS
HEMPPGDAGFALFEIVSSIPHPKESLYRFWNSHPVSPRRGIVILDNATSRNGRMDQSTAD
NSTELGARTLRRCRDLQDRIQAIRENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQE
RSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTAKSMLRKSERASNVCKSSKNLN
IKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTVESSERLQSTYSTGLAQSP
GNGKGNIQNQSNVCNFKGARLMGKSICGGSSSIPNKQGDSSSINLTGPVPGTSYSHIGEH
DVLPSSSKIVDPEGKVLAESKARKYDHAKCEIQSLVKLNLKCLSRDKRLEYDAFKKVAKL
ATHTILASCGLEHPKSGIRFHPSSTVCSHGEHIKKLCKSTLMPDCCRECFYAFVKDVIRS
IMFEKVDGTGRIH
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005857
(673 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2078092 - symbol:AT3G05670 "AT3G05670" species... 398 9.5e-48 3
ZFIN|ZDB-GENE-030131-624 - symbol:phrf1 "PHD and ring fin... 182 1.8e-10 2
UNIPROTKB|I3LU11 - symbol:PHRF1 "Uncharacterized protein"... 179 2.1e-10 3
FB|FBgn0037344 - symbol:CG2926 species:7227 "Drosophila m... 179 1.7e-09 5
ASPGD|ASPL0000065135 - symbol:AN7294 species:162425 "Emer... 170 3.6e-09 1
MGI|MGI:2141847 - symbol:Phrf1 "PHD and ring finger domai... 181 4.0e-09 2
TAIR|locus:2123446 - symbol:AT4G10940 "AT4G10940" species... 131 4.3e-09 2
UNIPROTKB|E9PJ24 - symbol:PHRF1 "PHD and RING finger doma... 176 9.0e-09 3
UNIPROTKB|F8WEF5 - symbol:PHRF1 "PHD and RING finger doma... 176 9.0e-09 3
UNIPROTKB|Q9P1Y6 - symbol:PHRF1 "PHD and RING finger doma... 176 9.1e-09 3
POMBASE|SPCC126.07c - symbol:SPCC126.07c "human CTD-bindi... 170 1.1e-08 3
ZFIN|ZDB-GENE-030131-6401 - symbol:toporsa "topoisomerase... 131 1.3e-08 3
RGD|708360 - symbol:Phrf1 "PHD and ring finger domains 1"... 175 2.2e-08 2
UNIPROTKB|Q63625 - symbol:Phrf1 "PHD and RING finger doma... 175 2.2e-08 2
UNIPROTKB|J9P712 - symbol:PHRF1 "Uncharacterized protein"... 171 5.8e-08 3
UNIPROTKB|F1PXY6 - symbol:PHRF1 "Uncharacterized protein"... 171 6.0e-08 3
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 145 5.5e-06 1
UNIPROTKB|Q59SG9 - symbol:PGA55 "Flocculin-like protein" ... 145 5.5e-06 1
UNIPROTKB|F1SHI5 - symbol:BAZ1A "Uncharacterized protein"... 134 9.3e-06 2
FB|FBgn0034410 - symbol:Topors "Topoisomerase I-interacti... 124 1.7e-05 2
UNIPROTKB|F1N329 - symbol:TOPORS "Uncharacterized protein... 125 2.4e-05 2
GENEDB_PFALCIPARUM|PFF1185w - symbol:PFF1185w "iswi prote... 117 2.7e-05 2
UNIPROTKB|C6KT82 - symbol:PFF1185w "Smarca-related protei... 117 2.7e-05 2
UNIPROTKB|Q9NRL2 - symbol:BAZ1A "Bromodomain adjacent to ... 138 3.5e-05 1
UNIPROTKB|B7ZS37 - symbol:baz2a "Bromodomain adjacent to ... 138 3.9e-05 1
UNIPROTKB|Q2T9V9 - symbol:PHF10 "PHD finger protein 10" s... 125 4.7e-05 2
TAIR|locus:2033691 - symbol:AT1G67180 species:3702 "Arabi... 130 5.1e-05 1
UNIPROTKB|F1NFV8 - symbol:BAZ1A "Uncharacterized protein"... 136 5.6e-05 1
UNIPROTKB|E2RE69 - symbol:BAZ1A "Uncharacterized protein"... 139 5.6e-05 2
UNIPROTKB|J9P748 - symbol:BAZ1A "Uncharacterized protein"... 139 5.9e-05 2
DICTYBASE|DDB_G0289719 - symbol:DDB_G0289719 "SFRS2-inter... 143 5.9e-05 2
DICTYBASE|DDB_G0281183 - symbol:DDB_G0281183 "RING zinc f... 133 6.4e-05 2
RGD|1305270 - symbol:Topors "topoisomerase I binding, arg... 125 6.8e-05 2
UNIPROTKB|Q8WUB8 - symbol:PHF10 "PHD finger protein 10" s... 126 8.5e-05 2
SGD|S000006297 - symbol:ASR1 "Ubiquitin ligase that modif... 95 0.00010 2
RGD|2319802 - symbol:LOC100365068 "rCG50794-like" species... 110 0.00011 3
UNIPROTKB|F1PR25 - symbol:PHF10 "Uncharacterized protein"... 125 0.00011 2
MGI|MGI:1919307 - symbol:Phf10 "PHD finger protein 10" sp... 125 0.00011 2
RGD|1305266 - symbol:Phf10 "PHD finger protein 10" specie... 125 0.00011 2
RGD|1598325 - symbol:Scaf11 "SR-related CTD-associated fa... 110 0.00013 3
TAIR|locus:2089606 - symbol:AT3G14740 species:3702 "Arabi... 123 0.00018 1
UNIPROTKB|Q9NS56 - symbol:TOPORS "E3 ubiquitin-protein li... 125 0.00022 2
RGD|1561238 - symbol:RGD1561238 "similar to ring finger p... 100 0.00030 1
UNIPROTKB|F1SC16 - symbol:LOC100511482 "Uncharacterized p... 122 0.00031 2
MGI|MGI:2146189 - symbol:Topors "topoisomerase I binding,... 125 0.00035 2
UNIPROTKB|F1SC00 - symbol:LOC100511482 "Uncharacterized p... 122 0.00036 2
RGD|1306199 - symbol:Baz1a "bromodomain adjacent to zinc ... 132 0.00038 2
UNIPROTKB|F8W6K1 - symbol:SCAF11 "Protein SCAF11" species... 99 0.00038 1
UNIPROTKB|F1MG25 - symbol:BAZ2B "Uncharacterized protein"... 128 0.00039 1
UNIPROTKB|F1PHI0 - symbol:TOPORS "Uncharacterized protein... 125 0.00045 2
ZFIN|ZDB-GENE-041024-2 - symbol:dpf2 "D4, zinc and double... 120 0.00051 1
UNIPROTKB|I3LN35 - symbol:BAZ2B "Uncharacterized protein"... 128 0.00053 1
UNIPROTKB|F1NRS9 - symbol:BAZ2B "Bromodomain adjacent to ... 128 0.00054 1
UNIPROTKB|F1RPS1 - symbol:BAZ2B "Uncharacterized protein"... 128 0.00055 1
UNIPROTKB|F1MCP3 - symbol:BAZ2B "Uncharacterized protein"... 128 0.00058 1
UNIPROTKB|F1P2F7 - symbol:BAZ2B "Bromodomain adjacent to ... 128 0.00059 1
UNIPROTKB|E1C3I8 - symbol:BAZ2B "Bromodomain adjacent to ... 128 0.00059 1
UNIPROTKB|Q9DE13 - symbol:BAZ2B "Bromodomain adjacent to ... 128 0.00059 1
UNIPROTKB|E1BNJ5 - symbol:BAZ2B "Uncharacterized protein"... 128 0.00060 1
TAIR|locus:2150310 - symbol:AT5G19430 species:3702 "Arabi... 107 0.00061 2
MGI|MGI:1309478 - symbol:Baz1a "bromodomain adjacent to z... 129 0.00066 2
UNIPROTKB|E1C454 - symbol:LOC100857350 "Uncharacterized p... 118 0.00070 2
POMBASE|SPCC645.13 - symbol:SPCC645.13 "transcription elo... 123 0.00077 2
RGD|1306670 - symbol:Rnf139 "ring finger protein 139" spe... 96 0.00080 1
ZFIN|ZDB-GENE-030131-2199 - symbol:prkcbp1l "protein kina... 98 0.00083 2
UNIPROTKB|F1SE69 - symbol:TOPORS "Uncharacterized protein... 125 0.00091 2
>TAIR|locus:2078092 [details] [associations]
symbol:AT3G05670 "AT3G05670" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AC011620 HSSP:Q14839
eggNOG:NOG300312 EMBL:AY120751 EMBL:BT002568 IPI:IPI00528739
RefSeq:NP_187218.1 UniGene:At.18633 ProteinModelPortal:Q9M9X2
SMR:Q9M9X2 EnsemblPlants:AT3G05670.1 GeneID:819734
KEGG:ath:AT3G05670 TAIR:At3g05670 HOGENOM:HOG000093083
InParanoid:Q9M9X2 OMA:CKQRFRT ProtClustDB:CLSN2684496
Genevestigator:Q9M9X2 Uniprot:Q9M9X2
Length = 883
Score = 398 (145.2 bits), Expect = 9.5e-48, Sum P(3) = 9.5e-48
Identities = 67/137 (48%), Positives = 92/137 (67%)
Query: 9 CGICLMDEG-KSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKD--GVF 65
CGICL +E + ++G +D C HYFCF CIMEW+K+ES+CP+CK+RF +I +P + GV
Sbjct: 413 CGICLSEEDMRRLKGTLDCCSHYFCFTCIMEWSKVESRCPLCKQRFRTISKPARSTPGVD 472
Query: 66 PRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYC 125
RE + VP+RDQ+Y DPY + C C + L+LLCDLCD+++HTYC
Sbjct: 473 LREVVIPVPERDQVYQPTEEELRSYLDPYENIICTECHQGDDDGLMLLCDLCDSSAHTYC 532
Query: 126 VGMGNAVPEGDWFCHDC 142
VG+G VPEG+W+C C
Sbjct: 533 VGLGREVPEGNWYCEGC 549
Score = 172 (65.6 bits), Expect = 9.5e-48, Sum P(3) = 9.5e-48
Identities = 41/131 (31%), Positives = 62/131 (47%)
Query: 537 IGEHDVLPSSSKIVDPEGKVLAESKARKYDHAKCEIQSLVKLNLKCLSRDKRLEYDAFKK 596
+G H L +V + ++ + A +Q VK +LK LS L F +
Sbjct: 740 LGFHHGLAQGDPLVSNQQRLHSHMPNTMSSMAGERLQERVKAHLKNLSSQNDLGQTTFDE 799
Query: 597 VAKLATHTILASCGLEHPKSGIRFHPSSTVCSH-----GEHIKKLCKSTLMPDCCRECFY 651
++ + HTILA+CGLEH S + P C+H G S+LM CC CF
Sbjct: 800 ISTCSIHTILAACGLEHESSEVHLVPPPVTCTHHHMTPGSSSSSSSGSSLMKGCCYSCFD 859
Query: 652 AFVKDVIRSIM 662
+FV+DV++ I+
Sbjct: 860 SFVEDVVKMIL 870
Score = 46 (21.3 bits), Expect = 9.5e-48, Sum P(3) = 9.5e-48
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 275 VSPRRGIVILDNATSRNGRMDQSTADNSTELGARTLRRCRDLQDRIQAI 323
VSPR +N S + + + LGA TL R R L IQ I
Sbjct: 593 VSPRTPFFNGENLFSPRIPNGDAQGSSPSGLGATTLSRRRTLHRHIQNI 641
Score = 38 (18.4 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 7/37 (18%), Positives = 16/37 (43%)
Query: 147 DEHDNAEIETDTETVFGDGSVSEVVVQNSDSEHNNAE 183
DE + ++E DG ++ ++ D+ + E
Sbjct: 177 DEEEERDVENVDSNSLHDGEDGKMALEEQDNVSHETE 213
>ZFIN|ZDB-GENE-030131-624 [details] [associations]
symbol:phrf1 "PHD and ring finger domains 1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518
ZFIN:ZDB-GENE-030131-624 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 GeneTree:ENSGT00530000063661 EMBL:AL928892
Ensembl:ENSDART00000150719 Bgee:H0WEE0 Uniprot:H0WEE0
Length = 1670
Score = 182 (69.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 44/139 (31%), Positives = 62/139 (44%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI-RRPPKDGV 64
S C ICL + ++C+HYFC CI+EW+K + CP+ + F +I R G
Sbjct: 99 SEKCPICLNSFHEQPVATPETCEHYFCLDCILEWSKNANSCPVDRIVFNNIILRKCHGGK 158
Query: 65 FPRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTY 124
+ V P + A + C +C G E LLLCD CD H
Sbjct: 159 IQKTIAVKKPVKP--------AEEQVEVDLDQTSCEICGGRDREDRLLLCDGCDAGYHME 210
Query: 125 CVGMG-NAVPEGDWFCHDC 142
C+ +AVP +WFC +C
Sbjct: 211 CLTPPLDAVPVEEWFCPEC 229
Score = 58 (25.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 29/127 (22%), Positives = 46/127 (36%)
Query: 346 TKH-RKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTAKSMLR 404
TKH R + S+ R + S S Q RS++ S D K ++ S R
Sbjct: 1042 TKHSRSKEKRRSRSRSRDRRRSRSKSKERQRSRSKERKHVHSRD-----KRCSSSSSRER 1096
Query: 405 KSERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTVES 464
+ +C+ S N + + S H R + R MS + Q + +
Sbjct: 1097 STSGKKVICERSDNRGRERQRKRPKERRYSRSHSYSRSRSRERKSMS--KCQGDSRSKRQ 1154
Query: 465 SERLQST 471
L+ST
Sbjct: 1155 KSELRST 1161
Score = 56 (24.8 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 17/89 (19%), Positives = 45/89 (50%)
Query: 364 QPCPSTSGTGQHLRSQDGSSCDSHD--VGKAWKMMKTAKSMLRKSERASNVCKSSKNLNI 421
Q C +S T ++++S+ ++ + K ++ + S L+++ + + VCK +++
Sbjct: 942 QECTRSSCTDRNVKSELNFKIEAEPTPIRPQSKSLEESLSNLQQTSQHNLVCKELPSVSG 1001
Query: 422 KVNASKQAMNTRSSLHDAE----RQQPGN 446
+NA+ +++ H ++ +Q P N
Sbjct: 1002 VLNATNISVDREEKSHQSQSKDNKQSPSN 1030
Score = 50 (22.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 16/67 (23%), Positives = 27/67 (40%)
Query: 370 SGTGQHLRSQDGSSCDSHDVGKAWKMMKTAKSMLRKSERASNVCKSSKNLNIKVNASKQA 429
+GT Q R+ D G + + S +SN SS +++ ++N+S
Sbjct: 720 TGTSQQNRTLDVQKQTVDRTGASSSFSSSFTSTASSYSASSNSRPSSSSISFRINSSGNP 779
Query: 430 MNTRSSL 436
TR L
Sbjct: 780 WQTRRLL 786
Score = 49 (22.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 34/161 (21%), Positives = 66/161 (40%)
Query: 397 KTAKSMLRKSERASNVCKSS--KNLN-IKVNASKQAMNTRSSLHDAERQQPGN----RSV 449
K+ +S + ++++ + C+S K+ + K + SK+ +RS D R + + RS
Sbjct: 1015 KSHQSQSKDNKQSPSNCQSFHYKDCHKTKHSRSKEKRRSRSRSRDRRRSRSKSKERQRSR 1074
Query: 450 MSDRRNQNTA--MTVESSERLQSTYSTGLA--QSPGNGKGNIQNQSNVCNFKGARLMGKS 505
+R++ ++ SS R +ST + +S G+ + + + + +S
Sbjct: 1075 SKERKHVHSRDKRCSSSSSRERSTSGKKVICERSDNRGRERQRKRPKERRYSRSHSYSRS 1134
Query: 506 ICGGSSSIPNKQGDSSSINLTGPVPGTSYSHIGEHDVLPSS 546
S+ QGDS S + TS D L S
Sbjct: 1135 RSRERKSMSKCQGDSRSKRQKSELRSTSRERKKREDQLGKS 1175
Score = 41 (19.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 391 KAWKMMKTAKSMLRKSERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAER 441
KA K+ T S L+ + S+ KS K++ N ++ + LH ER
Sbjct: 1536 KASKVTATLSS-LQSPQGESSKPKSRKDVLQDPNEKEKVVGYMKKLHMQER 1585
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 347 KHRKRHNVSEVSQER 361
KH +RH E Q R
Sbjct: 1644 KHARRHRKEESGQSR 1658
>UNIPROTKB|I3LU11 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
Prosite:PS00518 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:FP015900
Ensembl:ENSSSCT00000024857 Uniprot:I3LU11
Length = 1643
Score = 179 (68.1 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 47/140 (33%), Positives = 62/140 (44%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR-RPPKDGV 64
+ SC ICL G ++C HYFC CI+EW+K + CP+ + F I R G
Sbjct: 103 AESCPICLNAFRDQAVGTPENCAHYFCLDCILEWSKNANSCPVDRTVFKCICIRAQLGGK 162
Query: 65 FPRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTY 124
R+ V P+ + DP C VC + E LLLCD CD H
Sbjct: 163 ILRKIPVENPR---------LGEHEEEDP---TFCEVCGRSDREDRLLLCDGCDAGYHME 210
Query: 125 CVGMG-NAVPEGDWFCHDCT 143
C+ VP +WFC +CT
Sbjct: 211 CLEPPLQEVPVDEWFCPECT 230
Score = 63 (27.2 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 30/135 (22%), Positives = 60/135 (44%)
Query: 365 PCPSTSGTGQH----LRSQDGSSCDSHDVGKAWKMMKTAKSMLRKSERASNVCKSSKNLN 420
P PS T H LRS S S G+ + A S K R+ + +SS++
Sbjct: 957 PSPSAPHTTTHRVVELRSPTRSRSTSSSRGRKKAQRQQASSREHKRARSGSGSRSSRS-- 1014
Query: 421 IKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTVESSERLQSTYSTGLAQSP 480
+ S ++++ + A+R +P RS R + + + + E ++R ++ + +
Sbjct: 1015 --GDRSSRSVSPAGAEDQAKRHRPKARS---RRSSSDRSSSHERAKRKKAKAKSRERRRG 1069
Query: 481 GNGKGNIQNQSNVCN 495
G+G +++S C+
Sbjct: 1070 SWGRGRRRSRSRSCS 1084
Score = 55 (24.4 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 23/115 (20%), Positives = 44/115 (38%)
Query: 341 PVESGTKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTAK 400
P H H V E+ + S+ G + R Q +S H ++ ++++
Sbjct: 956 PPSPSAPHTTTHRVVELRSPTRSRSTSSSRGRKKAQRQQ--ASSREHKRARSGSGSRSSR 1013
Query: 401 SMLRKSERASNVCKSSKNLNIKVNA-SKQAMNTRSSLHDAERQQPGNRSVMSDRR 454
S R S S + + A S+++ + RSS H+ +++ RR
Sbjct: 1014 SGDRSSRSVSPAGAEDQAKRHRPKARSRRSSSDRSSSHERAKRKKAKAKSRERRR 1068
Score = 46 (21.3 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 22/95 (23%), Positives = 45/95 (47%)
Query: 518 GDSSSINLTGPVPGTSYSHIGEHDVLPSSSKIVDPEGKVLAESKARKYDHAKCEIQSLVK 577
G +S+ GPV S + DV+P++S++ G+ A ++ R+ + + +
Sbjct: 233 GAASAAADAGPVSEEEVSLLLT-DVVPTTSRLRPHAGRTRAIARTRQSERVRATV----- 286
Query: 578 LNLKCLSRDKRLEYDAFKKVAKLATHTILA-SCGL 611
N +S +R+++ ++ L TI A + GL
Sbjct: 287 -NRNRISTARRVQHVPRYLMSSLLDETIEAVATGL 320
Score = 44 (20.5 bits), Expect = 2.1e-10, Sum P(3) = 2.1e-10
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 558 AESKARKYDHAK-CEIQSL----VKLNLKCLSRDKRLEYDAFKKVAKLATHTILASCGLE 612
A KAR ++ K +Q VKL +K + + + D +K + + A I C
Sbjct: 1545 ASEKARNEEYMKKLHVQERAVEEVKLAIKPFYQKREVTKDEYKDILRKAVQKI---C--- 1598
Query: 613 HPKSG 617
H KSG
Sbjct: 1599 HSKSG 1603
Score = 37 (18.1 bits), Expect = 8.7e-08, Sum P(3) = 8.7e-08
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 351 RHNVSEVSQERSGQPCPST 369
R VS + E +G P P T
Sbjct: 1317 RREVSLIHGEDAGPPLPQT 1335
>FB|FBgn0037344 [details] [associations]
symbol:CG2926 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
Prosite:PS00518 EMBL:AE014297 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 GO:GO:0000381 HSSP:Q9UIG0
GeneTree:ENSGT00530000063661 FlyBase:FBgn0037344 RefSeq:NP_649554.1
ProteinModelPortal:Q9VNE0 SMR:Q9VNE0 IntAct:Q9VNE0 MINT:MINT-746219
STRING:Q9VNE0 PRIDE:Q9VNE0 EnsemblMetazoa:FBtr0078752 GeneID:40676
KEGG:dme:Dmel_CG2926 UCSC:CG2926-RA InParanoid:Q9VNE0 OMA:YEDLFEP
PhylomeDB:Q9VNE0 GenomeRNAi:40676 NextBio:819988
ArrayExpress:Q9VNE0 Bgee:Q9VNE0 Uniprot:Q9VNE0
Length = 2296
Score = 179 (68.1 bits), Expect = 1.7e-09, Sum P(5) = 1.7e-09
Identities = 46/164 (28%), Positives = 71/164 (43%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVFPRE 68
C ICL+ + G +C+H FC CI W++ CP+ + F I +D R
Sbjct: 155 CPICLLTFRQQEIGTPATCEHIFCAACIDAWSRNVQTCPIDRIEFDRII--VRDSYASR- 211
Query: 69 RFVVVPKRDQIYGGFGIASSRTADPYAY-----VRCNVCQGTTYESLLLLCDLCDTASHT 123
R V + D + AD A C +C+ E ++LLCD C+ H
Sbjct: 212 RVVREVRLDLSKSNTELVVDDEADTAALSEEEVTNCEICESPDREDVMLLCDSCNQGYHM 271
Query: 124 YCVGMG-NAVPEGDWFCHDCTVLRDEHDNAEIET--DTETVFGD 164
C+ +P G W+C +C DE DN ++E D + ++ D
Sbjct: 272 DCLDPPLYEIPAGSWYCDNCIDSDDEDDNEQLELADDLDQLYED 315
Score = 64 (27.6 bits), Expect = 2.8e-09, Sum P(4) = 2.8e-09
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 481 GNGKGNIQNQSNV----CNFKGARLMGKSICGGSSSIPNKQGDSSSINLTGPVPGTSYSH 536
G G G+ + +N +++G G G S +P+ G++SS +LTG G
Sbjct: 631 GGGAGSSDSYNNRYSGNTSYRGGGGGGAGGSSGGSGVPSSSGEASSRHLTGEGDGQGGGG 690
Query: 537 IGEHDVLPSSS 547
G + S S
Sbjct: 691 FGNQNFSSSGS 701
Score = 54 (24.1 bits), Expect = 1.7e-09, Sum P(5) = 1.7e-09
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 290 RNGRMDQSTADNSTELGARTLR-RCRDLQDRI-QAIRENWSALQNN--SLRFSSIPVESG 345
RN R D+S D S +R+L + R R+ ++I + S ++ S FS S
Sbjct: 1147 RNYRGDKSEPDRSPRPDSRSLTPKMRSKSPRVSKSISRSRSGSRSRCKSKSFSRSRSRSP 1206
Query: 346 TKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQ 379
++ R R + S+ S S S + H R +
Sbjct: 1207 SRSRNRRRRNSRSKSYSRSHSRSRSRSNSHSRQR 1240
Score = 53 (23.7 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 36/178 (20%), Positives = 68/178 (38%)
Query: 315 DLQDRIQAIRENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQPCPSTSGTGQ 374
D+Q + EN S ++ S R ++ + +K R + N E + + G+ + G
Sbjct: 1095 DIQSEDELNNENESPRRSRS-RGTANNKKDKSKSRSKRNKGETFK-KVGKRQKDRNYRGD 1152
Query: 375 HLRSQDGSSCDSHDVGKAW--KMMKTAKSMLRKSERASNVCKSSKNLNIKVNASKQAMNT 432
DS + K + +KS+ R + + CKS + + S+ +
Sbjct: 1153 KSEPDRSPRPDSRSLTPKMRSKSPRVSKSISRSRSGSRSRCKSK---SFSRSRSRSPSRS 1209
Query: 433 RSSLHDAERQQPGNRSVMSDRRNQNTAMTVESSERLQSTYSTGLAQSPGNGKGNIQNQ 490
R+ R + +RS R N+ S R + + G + G + N +NQ
Sbjct: 1210 RNRRRRNSRSKSYSRSHSRSRSRSNSHSRQRFSFRGRD-HQRGFFRGRGGLRLNYRNQ 1266
Score = 50 (22.7 bits), Expect = 1.7e-09, Sum P(5) = 1.7e-09
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 409 ASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQ------PGNRSVMSDRRNQNTAMTV 462
+ V S N+ + V+ +K++ +S + +QQ PG ++S+R T+M
Sbjct: 1627 SKEVFASGNNILVSVSFNKESNTNNASATLSSQQQSVVTIPPGREDLLSNRMTSMTSMAS 1686
Query: 463 ESS 465
+S
Sbjct: 1687 MAS 1689
Score = 47 (21.6 bits), Expect = 1.7e-09, Sum P(5) = 1.7e-09
Identities = 27/100 (27%), Positives = 38/100 (38%)
Query: 476 LAQSPGNGKGNIQNQSNVCN---FKGARL-----MGKSICGGSSSIP-----NKQGDSSS 522
L P N G+IQ +S V + + L +G S GG +K D +
Sbjct: 1953 LMNKP-NQSGSIQQESEVSSAQYISSSSLSLSLGVGSSTGGGGGGAGGGDNHDKTADGKT 2011
Query: 523 INLTGPVPGTSYSHIGEHDVLPSSSKIVDPEGKVLAESKA 562
I + V TS S + +PS S P K+ KA
Sbjct: 2012 ITVLSNVLLTSSSVVSSSQHIPSISSPTPPSKKLTPLPKA 2051
Score = 45 (20.9 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 24/117 (20%), Positives = 41/117 (35%)
Query: 415 SSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTVESSERLQSTYST 474
+ N + A A+N L A +P + ++A + SS + S
Sbjct: 1929 TGSNASTNTQAQGNALNP-VDLVMALMNKPNQSGSIQQESEVSSAQYISSSSL---SLSL 1984
Query: 475 GLAQSPGNGKGNI---QNQSNVCNFKGARLMGKSICGGSSSIPNKQGDSSSINLTGP 528
G+ S G G G N + K ++ + SS + + Q S + T P
Sbjct: 1985 GVGSSTGGGGGGAGGGDNHDKTADGKTITVLSNVLLTSSSVVSSSQHIPSISSPTPP 2041
Score = 43 (20.2 bits), Expect = 2.8e-09, Sum P(4) = 2.8e-09
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 581 KCLSRDKRLEYDAFKKVAK 599
K SR KR + + FKKV K
Sbjct: 1124 KSKSRSKRNKGETFKKVGK 1142
Score = 39 (18.8 bits), Expect = 1.7e-08, Sum P(5) = 1.7e-08
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 421 IKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTVESSERLQSTYSTGLAQSP 480
I + S+ A SS + ER + + +M + + V S + + T + QS
Sbjct: 1735 IVLTDSEDATEPLSSRRERERDR--DHELMRENGQREKTPQVGSLDAIMETSYENMTQST 1792
Query: 481 G 481
G
Sbjct: 1793 G 1793
Score = 38 (18.4 bits), Expect = 1.7e-09, Sum P(5) = 1.7e-09
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 177 SEHNNAETVAEIVNFGGSQEVVENSGSERSTVETVS 212
S H + T + FG + ++ S SE V +S
Sbjct: 473 SSHLSGGTASSFSLFGNANDLEYFSDSEPDAVSQIS 508
Score = 38 (18.4 bits), Expect = 5.2e-08, Sum P(5) = 5.2e-08
Identities = 9/42 (21%), Positives = 21/42 (50%)
Query: 347 KHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSSCDSHD 388
K +K+ + + ++R+G P+T+ + + Q D+ D
Sbjct: 1484 KKKKKKSDKKKRRKRTGSSSPTTAARMRRISRQRDPFEDADD 1525
>ASPGD|ASPL0000065135 [details] [associations]
symbol:AN7294 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:RANSCPI EnsemblFungi:CADANIAT00000144
Uniprot:C8VCR2
Length = 614
Score = 170 (64.9 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 39/130 (30%), Positives = 57/130 (43%)
Query: 19 SIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVFPRERFVVVPKRDQ 78
S Q+ C H C+ W + + CP+C+R F + + G P V R Q
Sbjct: 51 SFIAQLLPCGHILHNNCLKPWVERANSCPICRRTFNEVELSDRVGG-PVISSYAVEDRVQ 109
Query: 79 I--YGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGD 136
+ + D + C +C + E +LLLCD CD +H YCVG+ + VP G
Sbjct: 110 VADVDPSMVVEYIDDDVSDFQPCPICGDSENEEVLLLCDGCDVPTHIYCVGL-DEVPAGP 168
Query: 137 WFCHDCTVLR 146
W+C C R
Sbjct: 169 WYCSRCETQR 178
>MGI|MGI:2141847 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070063 "RNA polymerase binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
MGI:MGI:2141847 Prosite:PS00518 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM ChiTaRS:PHRF1
GO:GO:0070063 EMBL:AC108908 EMBL:AC163434 EMBL:BC094566
EMBL:BC138446 EMBL:BC145719 EMBL:AK129387 IPI:IPI00881116
IPI:IPI00881246 RefSeq:NP_001074587.1 UniGene:Mm.248656
ProteinModelPortal:A6H619 SMR:A6H619 STRING:A6H619 PRIDE:A6H619
Ensembl:ENSMUST00000106027 Ensembl:ENSMUST00000122143 GeneID:101471
KEGG:mmu:101471 UCSC:uc009kkb.1 UCSC:uc009kkc.1
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 InParanoid:Q505G1
NextBio:354944 Bgee:A6H619 Genevestigator:A6H619 Uniprot:A6H619
Length = 1682
Score = 181 (68.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 50/158 (31%), Positives = 72/158 (45%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR-RPPKDGV 64
+ SC ICL G ++C HYFC CI+EW++ + CP+ + F I R +G
Sbjct: 106 AESCPICLNAFRDQAVGTPETCAHYFCLDCIIEWSRNANSCPVDRTVFKCICIRAQFNGK 165
Query: 65 FPRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTY 124
++ +P + + DP C VC + E LLLCD CD H
Sbjct: 166 ILKK----IPVENT-----KACEAEEEDP---TFCEVCGRSDREDRLLLCDGCDAGYHME 213
Query: 125 CVGMG-NAVPEGDWFCHDCTV--LRDEHDNAEIETDTE 159
C+ VP +WFC +CTV + HD A + +D E
Sbjct: 214 CLDPPLQEVPVDEWFCPECTVPGVDPTHDAAPV-SDEE 250
Score = 46 (21.3 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 18/73 (24%), Positives = 31/73 (42%)
Query: 311 RRCRDLQDRIQAIREN--WSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQPCPS 368
R D Q+ + RE W + ++ SL P ++ ++ H+ + R P P+
Sbjct: 1149 RERMDKQESVTRSRERRRWRS-RSPSLEHR--PRRPPSREKRAHSPEKKGPVREVSPAPA 1205
Query: 369 TSGTGQHLRSQDG 381
T G + QDG
Sbjct: 1206 TQGESR----QDG 1214
Score = 45 (20.9 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 29/131 (22%), Positives = 55/131 (41%)
Query: 344 SGTKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTAKSML 403
SG++ R +VS V++E + + + T S D +S S D K K
Sbjct: 1034 SGSRDRTSRSVSPVAEEHTRR---HRAKTKSRRSSSDRAS--SQDRAKRRKDRDDRDREH 1088
Query: 404 RKSERASNVCK-SSKNLNIKVNAS---KQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTA 459
R+ C+ S++ + +S + R H R + G+ S+ DRR+++
Sbjct: 1089 RRGSWGHGRCRRKSRSRSGSPGSSSCERHESKRRKRRHSGSRSR-GS-SLERDRRHKHRE 1146
Query: 460 MTVESSERLQS 470
+ E ++ +S
Sbjct: 1147 RSRERMDKQES 1157
Score = 43 (20.2 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 30/134 (22%), Positives = 55/134 (41%)
Query: 410 SNVCKSSKNLNIKVNASKQAMNTRSSL--HDAERQQPGNR--SVMSDRR--NQNTAMTVE 463
SNV SS + I ++S + NT S L R+ ++ + R N++T
Sbjct: 640 SNVRVSSASTKIVTHSSFPSKNTASGLPQRTGPRRPDFSKLPRIPKIHRDGNKSTQDQAP 699
Query: 464 SSERLQSTYSTGLA-----QSPGN-GKGNIQNQSNVCNFKGARLMGKSICGGSSSIPNKQ 517
+S + ST ++ + PG G+G + ++ + +G + G G P+
Sbjct: 700 ASGHIVELPSTCISRLTGREGPGQPGRGRVDSEPSS---RGPQETGSHTSGSRPPAPSSH 756
Query: 518 GDSSSINLTGPVPG 531
G + + GP G
Sbjct: 757 GSLAHL---GPSRG 767
Score = 41 (19.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 541 DVLPSSSKIVDPEGKVLAESKARKYDHAKCEIQSLVKLNLKCLSRDKRLEYDAFKKVAKL 600
DV+P++S++ G+ A ++ R+ + + + N +S +R+++ ++ L
Sbjct: 257 DVVPTTSRLRPRVGRTRAIARTRQSERVRATV------NRNRISSARRVQHVPRYLMSSL 310
Query: 601 ATHTILA-SCGL 611
TI A + GL
Sbjct: 311 LDETIEAVATGL 322
Score = 38 (18.4 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 356 EVSQERSGQ--PCPSTSGTGQHLRSQDGSSCDS 386
E SG P PS+ G+ HL G S
Sbjct: 740 ETGSHTSGSRPPAPSSHGSLAHLGPSRGKGIGS 772
>TAIR|locus:2123446 [details] [associations]
symbol:AT4G10940 "AT4G10940" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 Prosite:PS00518 EMBL:CP002687 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
IPI:IPI00519012 RefSeq:NP_567371.1 UniGene:At.54267
ProteinModelPortal:F4JN66 SMR:F4JN66 EnsemblPlants:AT4G10940.1
GeneID:826693 KEGG:ath:AT4G10940 OMA:DEDCCIE Uniprot:F4JN66
Length = 192
Score = 131 (51.2 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 26/60 (43%), Positives = 33/60 (55%)
Query: 1 MEGLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPP 60
M + CGIC MD RG +D C H+FCF CI W+ I + CP+C+R F I P
Sbjct: 23 MTEIEGERCGIC-MDIIID-RGVLDCCQHWFCFECIDNWSTIMNLCPLCQREFQLITCVP 80
Score = 59 (25.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 112 LLCDLCDTASHTYCVGMG--NAVPEGDWFC 139
+ CD CD H CVG NA E W C
Sbjct: 155 IACDSCDMWYHAICVGFDVENA-SEDTWVC 183
>UNIPROTKB|E9PJ24 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284 HGNC:HGNC:24351
ChiTaRS:PHRF1 IPI:IPI00978364 Ensembl:ENST00000533464
UCSC:uc010qwe.2 ArrayExpress:E9PJ24 Bgee:E9PJ24 Uniprot:E9PJ24
Length = 1645
Score = 176 (67.0 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 47/139 (33%), Positives = 62/139 (44%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR-RPPKDGV 64
+ SC ICL G ++C HYFC CI+EW+K + CP+ + F I R G
Sbjct: 101 AESCPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCICIRAQFGGK 160
Query: 65 FPRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTY 124
R+ +P + AS DP C VC + E LLLCD CD H
Sbjct: 161 ILRK----IPVENTK------ASEEEEDP---TFCEVCGRSDREDRLLLCDGCDAGYHME 207
Query: 125 CVGMG-NAVPEGDWFCHDC 142
C+ VP +WFC +C
Sbjct: 208 CLDPPLQEVPVDEWFCPEC 226
Score = 57 (25.1 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 31/155 (20%), Positives = 61/155 (39%)
Query: 303 TELGARTLRRCRDLQDRIQAIRENWSALQNNSL--RFSSIPVESGTKHRKRHNVSEVSQE 360
T G R+ R R + ++ E Q + R SS S + KR + S+E
Sbjct: 1013 TRSGTRSESRDRSSRSASPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSRE 1072
Query: 361 RSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTA-KSMLRKSERASNVCKSSKNL 419
P + T + GSS H + K ++A + R+ S++ + ++
Sbjct: 1073 HRRGPWGHSRRTSRSRSGSPGSSSYEHYESRKKKKRRSASRPRGRECSPTSSLERLCRHK 1132
Query: 420 NIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRR 454
+ + + ++ S +R++ +RS S+ R
Sbjct: 1133 HQRERSHERPDRKESVAWPRDRRKRRSRSPSSEHR 1167
Score = 53 (23.7 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 35/125 (28%), Positives = 48/125 (38%)
Query: 359 QERSGQPCP--STSGTGQHLRSQ--DGSSCDSHDVGKAWKMMKTAKSMLRKSERASNVCK 414
++R P P S T Q LRS+ D S D + + L SE +
Sbjct: 803 EQRKENPSPLFSIKKTKQ-LRSEVYDPSDPTGSDSSAPGSSPERSGPGLLPSEITRTISI 861
Query: 415 SSKNLNIKVNASKQAMN-TRSSLHDAERQQP-GNRSVMSDRRNQNTAMTVESSERLQSTY 472
+S V A + + T S+ E + P G S MS R A +ER + T
Sbjct: 862 NSPKAQT-VQAVRCVTSYTVESIFGTEPEPPLGPSSAMSKLRGAVAAEGASDTEREEPTE 920
Query: 473 STGLA 477
S GLA
Sbjct: 921 SQGLA 925
Score = 42 (19.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 527 GPVPGTSYSHIGEHDVLPSSSKIVDPEGKVLAESKARKYDHAKCEI 572
GPV S + DV+P++S++ G+ A ++ R+ + + +
Sbjct: 238 GPVSEEEVSLLLA-DVVPTTSRLRPRAGRTRAIARTRQSERVRATV 282
Score = 38 (18.4 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 427 KQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTV-ESSERLQ 469
K+A R S + R + G RS DR +++ + +V E R Q
Sbjct: 999 KKAKRKRVS-REHGRTRSGTRSESRDRSSRSASPSVGEERPRRQ 1041
Score = 37 (18.1 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 273 HPVSPRRGIVILDNATSRN 291
H V RRG + AT+R+
Sbjct: 369 HRVKKRRGKKVKSEATTRS 387
>UNIPROTKB|F8WEF5 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AP006284
HGNC:HGNC:24351 ChiTaRS:PHRF1 IPI:IPI01013297
Ensembl:ENST00000413872 UCSC:uc009ybz.1 ArrayExpress:F8WEF5
Bgee:F8WEF5 Uniprot:F8WEF5
Length = 1647
Score = 176 (67.0 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 47/139 (33%), Positives = 62/139 (44%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR-RPPKDGV 64
+ SC ICL G ++C HYFC CI+EW+K + CP+ + F I R G
Sbjct: 104 AESCPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCICIRAQFGGK 163
Query: 65 FPRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTY 124
R+ +P + AS DP C VC + E LLLCD CD H
Sbjct: 164 ILRK----IPVENTK------ASEEEEDP---TFCEVCGRSDREDRLLLCDGCDAGYHME 210
Query: 125 CVGMG-NAVPEGDWFCHDC 142
C+ VP +WFC +C
Sbjct: 211 CLDPPLQEVPVDEWFCPEC 229
Score = 57 (25.1 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 31/155 (20%), Positives = 61/155 (39%)
Query: 303 TELGARTLRRCRDLQDRIQAIRENWSALQNNSL--RFSSIPVESGTKHRKRHNVSEVSQE 360
T G R+ R R + ++ E Q + R SS S + KR + S+E
Sbjct: 1015 TRSGTRSESRDRSSRSASPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSRE 1074
Query: 361 RSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTA-KSMLRKSERASNVCKSSKNL 419
P + T + GSS H + K ++A + R+ S++ + ++
Sbjct: 1075 HRRGPWGHSRRTSRSRSGSPGSSSYEHYESRKKKKRRSASRPRGRECSPTSSLERLCRHK 1134
Query: 420 NIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRR 454
+ + + ++ S +R++ +RS S+ R
Sbjct: 1135 HQRERSHERPDRKESVAWPRDRRKRRSRSPSSEHR 1169
Score = 53 (23.7 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 35/125 (28%), Positives = 48/125 (38%)
Query: 359 QERSGQPCP--STSGTGQHLRSQ--DGSSCDSHDVGKAWKMMKTAKSMLRKSERASNVCK 414
++R P P S T Q LRS+ D S D + + L SE +
Sbjct: 805 EQRKENPSPLFSIKKTKQ-LRSEVYDPSDPTGSDSSAPGSSPERSGPGLLPSEITRTISI 863
Query: 415 SSKNLNIKVNASKQAMN-TRSSLHDAERQQP-GNRSVMSDRRNQNTAMTVESSERLQSTY 472
+S V A + + T S+ E + P G S MS R A +ER + T
Sbjct: 864 NSPKAQT-VQAVRCVTSYTVESIFGTEPEPPLGPSSAMSKLRGAVAAEGASDTEREEPTE 922
Query: 473 STGLA 477
S GLA
Sbjct: 923 SQGLA 927
Score = 42 (19.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 527 GPVPGTSYSHIGEHDVLPSSSKIVDPEGKVLAESKARKYDHAKCEI 572
GPV S + DV+P++S++ G+ A ++ R+ + + +
Sbjct: 241 GPVSEEEVSLLLA-DVVPTTSRLRPRAGRTRAIARTRQSERVRATV 285
Score = 38 (18.4 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 427 KQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTV-ESSERLQ 469
K+A R S + R + G RS DR +++ + +V E R Q
Sbjct: 1001 KKAKRKRVS-REHGRTRSGTRSESRDRSSRSASPSVGEERPRRQ 1043
Score = 37 (18.1 bits), Expect = 9.0e-09, Sum P(3) = 9.0e-09
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 273 HPVSPRRGIVILDNATSRN 291
H V RRG + AT+R+
Sbjct: 372 HRVKKRRGKKVKSEATTRS 390
>UNIPROTKB|Q9P1Y6 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284
PharmGKB:PA164718737 HSSP:Q9UIG0 EMBL:AB040975 EMBL:BC004950
EMBL:BC013381 EMBL:BC029651 EMBL:BC041631 EMBL:BC136615
EMBL:BC144293 EMBL:BC146771 IPI:IPI00001813 IPI:IPI00827706
IPI:IPI00942878 RefSeq:NP_065952.2 UniGene:Hs.325838
ProteinModelPortal:Q9P1Y6 SMR:Q9P1Y6 IntAct:Q9P1Y6 STRING:Q9P1Y6
PhosphoSite:Q9P1Y6 DMDM:296439275 PaxDb:Q9P1Y6 PRIDE:Q9P1Y6
Ensembl:ENST00000264555 Ensembl:ENST00000416188
Ensembl:ENST00000534320 GeneID:57661 KEGG:hsa:57661 UCSC:uc001lqe.3
UCSC:uc010qwc.2 CTD:57661 GeneCards:GC11P000567 H-InvDB:HIX0201594
HGNC:HGNC:24351 HPA:HPA019867 MIM:611780 neXtProt:NX_Q9P1Y6
PharmGKB:PA164724459 eggNOG:NOG300312 HOVERGEN:HBG108250
InParanoid:Q9P1Y6 OMA:YMKKLHM OrthoDB:EOG4MSD0F ChiTaRS:PHRF1
GenomeRNAi:57661 NextBio:64425 ArrayExpress:Q9P1Y6 Bgee:Q9P1Y6
CleanEx:HS_PHRF1 Genevestigator:Q9P1Y6 GO:GO:0070063 Uniprot:Q9P1Y6
Length = 1649
Score = 176 (67.0 bits), Expect = 9.1e-09, Sum P(3) = 9.1e-09
Identities = 47/139 (33%), Positives = 62/139 (44%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR-RPPKDGV 64
+ SC ICL G ++C HYFC CI+EW+K + CP+ + F I R G
Sbjct: 105 AESCPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCICIRAQFGGK 164
Query: 65 FPRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTY 124
R+ +P + AS DP C VC + E LLLCD CD H
Sbjct: 165 ILRK----IPVENTK------ASEEEEDP---TFCEVCGRSDREDRLLLCDGCDAGYHME 211
Query: 125 CVGMG-NAVPEGDWFCHDC 142
C+ VP +WFC +C
Sbjct: 212 CLDPPLQEVPVDEWFCPEC 230
Score = 57 (25.1 bits), Expect = 9.1e-09, Sum P(3) = 9.1e-09
Identities = 31/155 (20%), Positives = 61/155 (39%)
Query: 303 TELGARTLRRCRDLQDRIQAIRENWSALQNNSL--RFSSIPVESGTKHRKRHNVSEVSQE 360
T G R+ R R + ++ E Q + R SS S + KR + S+E
Sbjct: 1017 TRSGTRSESRDRSSRSASPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSRE 1076
Query: 361 RSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTA-KSMLRKSERASNVCKSSKNL 419
P + T + GSS H + K ++A + R+ S++ + ++
Sbjct: 1077 HRRGPWGHSRRTSRSRSGSPGSSSYEHYESRKKKKRRSASRPRGRECSPTSSLERLCRHK 1136
Query: 420 NIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRR 454
+ + + ++ S +R++ +RS S+ R
Sbjct: 1137 HQRERSHERPDRKESVAWPRDRRKRRSRSPSSEHR 1171
Score = 53 (23.7 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 35/125 (28%), Positives = 48/125 (38%)
Query: 359 QERSGQPCP--STSGTGQHLRSQ--DGSSCDSHDVGKAWKMMKTAKSMLRKSERASNVCK 414
++R P P S T Q LRS+ D S D + + L SE +
Sbjct: 807 EQRKENPSPLFSIKKTKQ-LRSEVYDPSDPTGSDSSAPGSSPERSGPGLLPSEITRTISI 865
Query: 415 SSKNLNIKVNASKQAMN-TRSSLHDAERQQP-GNRSVMSDRRNQNTAMTVESSERLQSTY 472
+S V A + + T S+ E + P G S MS R A +ER + T
Sbjct: 866 NSPKAQT-VQAVRCVTSYTVESIFGTEPEPPLGPSSAMSKLRGAVAAEGASDTEREEPTE 924
Query: 473 STGLA 477
S GLA
Sbjct: 925 SQGLA 929
Score = 42 (19.8 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 527 GPVPGTSYSHIGEHDVLPSSSKIVDPEGKVLAESKARKYDHAKCEI 572
GPV S + DV+P++S++ G+ A ++ R+ + + +
Sbjct: 242 GPVSEEEVSLLLA-DVVPTTSRLRPRAGRTRAIARTRQSERVRATV 286
Score = 38 (18.4 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 427 KQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTV-ESSERLQ 469
K+A R S + R + G RS DR +++ + +V E R Q
Sbjct: 1003 KKAKRKRVS-REHGRTRSGTRSESRDRSSRSASPSVGEERPRRQ 1045
Score = 37 (18.1 bits), Expect = 9.1e-09, Sum P(3) = 9.1e-09
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 273 HPVSPRRGIVILDNATSRN 291
H V RRG + AT+R+
Sbjct: 373 HRVKKRRGKKVKSEATTRS 391
>POMBASE|SPCC126.07c [details] [associations]
symbol:SPCC126.07c "human CTD-binding SR-like protein
rA9 homolog (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISM]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=ISM] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 PomBase:SPCC126.07c Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 EMBL:CU329672 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0004842 InterPro:IPR024766 Pfam:PF12678
OrthoDB:EOG4WQ4BN HSSP:Q9UIG0 PIR:T40911 RefSeq:NP_588450.1
ProteinModelPortal:O94400 EnsemblFungi:SPCC126.07c.1 GeneID:2539058
KEGG:spo:SPCC126.07c eggNOG:NOG260239 OMA:RANSCPI NextBio:20800232
Uniprot:O94400
Length = 571
Score = 170 (64.9 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 38/120 (31%), Positives = 59/120 (49%)
Query: 27 CDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVF-PRERFVVVPKRDQIYGGFGI 85
C HYF C+ W ++ + CP+C+ F + + V P R V ++ Q G
Sbjct: 56 CGHYFHNHCLESWCRVANTCPLCRTEFLKV--DVLEFVKGPWYRAYPVEEKTQSVANAGE 113
Query: 86 ASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145
RC +C + + +LLLCD CD A HTYC+ M +AVP +++C +C +L
Sbjct: 114 PFEDEGSETC--RCVICGRSDHAEVLLLCDGCDDAYHTYCLNM-DAVPIEEFYCPNCVLL 170
Score = 42 (19.8 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 560 SKARKYDHAKCEIQSLVKLNLKCLSRDKRLEYDAF----KKVAKLATHTILA--SCGLEH 613
SK Y+ K I+ LV LK R+ ++ D F K + + + +T L+ + LE
Sbjct: 490 SKKVSYE-TKYRIERLVNAALKPYYREAKISKDQFALFNKNICR-SVYTALSDGTLSLEG 547
Query: 614 PK 615
P+
Sbjct: 548 PQ 549
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 434 SSLHDAERQQPGNRSVMSDRRNQ--NTAMTVESSERLQSTYSTGL 476
S+ HD +++P R + ++ +T + SS + ++++ L
Sbjct: 341 STSHDRRQKRPTRRHIPCSNKSSGSSTVLGNNSSSKSENSFLASL 385
Score = 40 (19.1 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 621 HPSSTVCSHGEH-IKKLCKSTLMP-----DCCRECFYAFVKDVIRSIMFEKVDGT 669
H S V ++ I++L + L P ++ F F K++ RS+ DGT
Sbjct: 488 HSSKKVSYETKYRIERLVNAALKPYYREAKISKDQFALFNKNICRSVYTALSDGT 542
>ZFIN|ZDB-GENE-030131-6401 [details] [associations]
symbol:toporsa "topoisomerase I binding,
arginine/serine-rich a" species:7955 "Danio rerio" [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0010842 "retina layer
formation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 ZFIN:ZDB-GENE-030131-6401 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 eggNOG:NOG244178 OrthoDB:EOG47H5PC EMBL:BC125819
IPI:IPI00512796 UniGene:Dr.22874 InParanoid:A0JMC0
ArrayExpress:A0JMC0 Uniprot:A0JMC0
Length = 846
Score = 131 (51.2 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVFPRE 68
C ICL D K+I +D C H FCF CI EW+K +++CP+CK+ F S K +
Sbjct: 28 CPICL-DHFKNI-SYLDVCLHKFCFCCIHEWSKNKAECPLCKQPFNSFYHTIKSED-DYK 84
Query: 69 RFVVVPKRDQIYGGFG-IASSR 89
RF + P + G FG +A R
Sbjct: 85 RFDLRPTEN---GSFGNMAGQR 103
Score = 91 (37.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 56/235 (23%), Positives = 106/235 (45%)
Query: 304 ELGART--LRRCRDLQDRIQAIRENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQER 361
+ G+R+ RRCRDL DR ++ R N S + ++ R + R R N S +S+
Sbjct: 570 QFGSRSHGKRRCRDLLDRSRS-RSN-SRISQSNRR---------NRSRSRSN-SRISRSN 617
Query: 362 SGQPCPSTSGTGQHLRSQDGSSCD-SHDVGKAW--KMMKTAKSMLRKSE--RASNVCKSS 416
S S +G+ ++ SC S+ + + + ++S RKS+ R + C S
Sbjct: 618 QRNRSHSRSNSGKSQSNRRNRSCSRSYSRTSPFNERNRRHSRSNSRKSQSNRRNRSCSRS 677
Query: 417 KNLNIKVNA-SKQAMNTRSSLHDAERQ-----QPGNRSVMSDRRNQNTAMTVESSERLQS 470
+ N +++ + S + + RQ + +R S+RRN+N + SS R+
Sbjct: 678 YSRTSPFNQRNRRHSRSNSRISQSSRQNRSLSRSNSRKGYSNRRNRNHS---RSSSRVSQ 734
Query: 471 TYSTGLAQSPGNGKGNIQNQSNVC-NFKGARLMGKSICGGSSSIPNKQGDSSSIN 524
+ + S N + I++ S + K R + +S+ ++ + ++ SS IN
Sbjct: 735 SSQRNRSHSRSNFR--IKSSSYKSQDEKYQRSLSRSLYS-NNDVRSRSRSSSRIN 786
Score = 83 (34.3 bits), Expect = 8.0e-08, Sum P(3) = 8.0e-08
Identities = 64/295 (21%), Positives = 114/295 (38%)
Query: 286 NATSRNGRMDQ-----STADNSTELGARTLR----RCRDLQDRIQAIRENWSALQNNSLR 336
NA+ RN + Q S +D S R LR R +D +R+N S N
Sbjct: 436 NASPRNSQAPQHIRFISDSDASPTASQRPLRGPASSSRSFEDTSIQLRKN-SKYDNT--- 491
Query: 337 FSSIPVESGTKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMM 396
FS E ++ ++ H+ S R QP S Q R + +S S ++
Sbjct: 492 FSGSR-EGSSQSKRIHS----SSHRKKQPLCKESKNKQ--RGEKETSRHSSSYWHSYSYY 544
Query: 397 KTAKSMLRKSERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQ 456
S +E +S+ +++N + + L D R + +R S+RRN+
Sbjct: 545 SHDNSRKAYTETSSSYTSYYRSVNDQFGSRSHGKRRCRDLLDRSRSRSNSRISQSNRRNR 604
Query: 457 NTAMT---VESSERLQSTYS---TGLAQSPGNGKGNIQNQSNVCNFKGA-RLMGKSICGG 509
+ + + + S + ++S +G +QS + ++ S F R +S
Sbjct: 605 SRSRSNSRISRSNQRNRSHSRSNSGKSQSNRRNRSCSRSYSRTSPFNERNRRHSRSNSRK 664
Query: 510 SSSIPNKQGDSSSINLTGPVPGTSYSHIGEHDVLPSSSKIVDPEGKVLAESKARK 564
S S + S S + T P + H + + SS+ + + L+ S +RK
Sbjct: 665 SQSNRRNRSCSRSYSRTSPFNQRNRRHSRSNSRISQSSR----QNRSLSRSNSRK 715
Score = 60 (26.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 33/170 (19%), Positives = 69/170 (40%)
Query: 288 TSRNGRMDQSTADNSTELGARTLRRCRDLQDRI-QAIRENWSALQNNSLRFSSIPVESGT 346
++R R + ++ R R R RI Q+ R+N S ++NS + S
Sbjct: 667 SNRRNRSCSRSYSRTSPFNQRNRRHSRS-NSRISQSSRQNRSLSRSNSRKGYS------N 719
Query: 347 KHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTAKSMLRKS 406
+ + H+ S +S Q S S + ++S S D + + + + +S
Sbjct: 720 RRNRNHSRSSSRVSQSSQRNRSHSRSNFRIKSSSYKSQDEKYQRSLSRSLYSNNDVRSRS 779
Query: 407 ERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQ 456
+S + SS+ + + + S MN+ SS + + G + + + ++
Sbjct: 780 RSSSRINTSSRQ-DRRRSRSSSRMNSSSSRQTSCHDKYGKKRMYKTKHHE 828
Score = 57 (25.1 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 40/187 (21%), Positives = 73/187 (39%)
Query: 288 TSRNGRMDQSTADNSTELGARTLRRCRDLQDRIQAIRENWSALQNNSLRFSSIPVESGTK 347
++R R + ++ R R R + Q+ R N S ++ S R S P +
Sbjct: 633 SNRRNRSCSRSYSRTSPFNERNRRHSRSNSRKSQSNRRNRSCSRSYS-RTS--PFNQRNR 689
Query: 348 HRKRHNVSEVSQE-RSGQPCP-STSGTGQHLRSQDGSSCDSHDVGKAWKMMKTAKSMLRK 405
R N S +SQ R + S S G R S S V ++ + +S R
Sbjct: 690 RHSRSN-SRISQSSRQNRSLSRSNSRKGYSNRRNRNHSRSSSRVSQS---SQRNRSHSRS 745
Query: 406 SERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPG-NRSVMSDRRNQNTAMTVES 464
+ R + S++ + + S+ ++ + + + R N S DRR ++ + S
Sbjct: 746 NFRIKSSSYKSQDEKYQRSLSR-SLYSNNDVRSRSRSSSRINTSSRQDRRRSRSSSRMNS 804
Query: 465 SERLQST 471
S Q++
Sbjct: 805 SSSRQTS 811
Score = 39 (18.8 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 169 EVVVQNSDSEHNNAETVAEIVNFGGSQEVVENSGSERS 206
E+V +SDSE++ E A N Q + S S+ S
Sbjct: 420 ELVQLSSDSENSETEQNASPRNSQAPQHIRFISDSDAS 457
>RGD|708360 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10116
"Rattus norvegicus" [GO:0006366 "transcription from RNA polymerase
II promoter" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IMP]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 RGD:708360 Prosite:PS00518
GO:GO:0019904 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 175 (66.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 49/158 (31%), Positives = 71/158 (44%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR-RPPKDGV 64
+ SC ICL G ++C HYFC CI+EW++ + CP+ + F I R +G
Sbjct: 106 AESCPICLNAFRDQAVGTPETCAHYFCLDCIIEWSRNANSCPVDRTIFKCICIRAQFNGK 165
Query: 65 FPRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTY 124
++ +P + + DP C VC + E LLLCD CD H
Sbjct: 166 ILKK----IPVENT--RACEDEEAEEEDP---TFCEVCGRSDREDRLLLCDGCDAGYHME 216
Query: 125 CVGMG-NAVPEGDWFCHDCTV--LRDEHDNAEIETDTE 159
C+ VP +WFC +C V + HD A + +D E
Sbjct: 217 CLDPPLQEVPVDEWFCPECAVPGVDPTHDAAPV-SDEE 253
Score = 45 (20.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 408 RASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVM------SDRRNQNTAMT 461
R+++ +S K K +++ TRSS R + +RSV + R T
Sbjct: 1005 RSTSSSRSRKKTKKKKKVAREHQRTRSSTRSGSRDRT-SRSVSPFTEEHTKRHRAKTKSR 1063
Query: 462 VESSERLQS 470
SS+R S
Sbjct: 1064 RSSSDRASS 1072
Score = 42 (19.8 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 20/84 (23%), Positives = 35/84 (41%)
Query: 296 QSTADNSTELGARTLRRCRDLQDRIQAIREN--W--SALQNNSLRFSSIPVESGTKHRKR 351
+S++D ++ R+ RD + R W S ++ S SS + ++R
Sbjct: 1064 RSSSDRASSQDRAKRRKDRDREHRRGPWGHGRCWRKSRSRSGSPGSSSCERHESRRRKRR 1123
Query: 352 HNVSEVSQERSGQPCPSTSGTGQH 375
H+ S S+ R G P S +H
Sbjct: 1124 HSGSR-SRGRDGSPHSSLERDRRH 1146
Score = 41 (19.5 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 541 DVLPSSSKIVDPEGKVLAESKARKYDHAKCEIQSLVKLNLKCLSRDKRLEYDAFKKVAKL 600
DV+P++S++ G+ A ++ R+ + + + N +S +R+++ ++ L
Sbjct: 260 DVVPTTSRLRPRVGRTRAIARTRQSERVRATV------NRNRISSARRVQHVPRYLMSSL 313
Query: 601 ATHTILA-SCGL 611
TI A + GL
Sbjct: 314 LDETIEAVATGL 325
>UNIPROTKB|Q63625 [details] [associations]
symbol:Phrf1 "PHD and RING finger domain-containing protein
1" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 RGD:708360
Prosite:PS00518 GO:GO:0019904 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 175 (66.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 49/158 (31%), Positives = 71/158 (44%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR-RPPKDGV 64
+ SC ICL G ++C HYFC CI+EW++ + CP+ + F I R +G
Sbjct: 106 AESCPICLNAFRDQAVGTPETCAHYFCLDCIIEWSRNANSCPVDRTIFKCICIRAQFNGK 165
Query: 65 FPRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTY 124
++ +P + + DP C VC + E LLLCD CD H
Sbjct: 166 ILKK----IPVENT--RACEDEEAEEEDP---TFCEVCGRSDREDRLLLCDGCDAGYHME 216
Query: 125 CVGMG-NAVPEGDWFCHDCTV--LRDEHDNAEIETDTE 159
C+ VP +WFC +C V + HD A + +D E
Sbjct: 217 CLDPPLQEVPVDEWFCPECAVPGVDPTHDAAPV-SDEE 253
Score = 45 (20.9 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 408 RASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVM------SDRRNQNTAMT 461
R+++ +S K K +++ TRSS R + +RSV + R T
Sbjct: 1005 RSTSSSRSRKKTKKKKKVAREHQRTRSSTRSGSRDRT-SRSVSPFTEEHTKRHRAKTKSR 1063
Query: 462 VESSERLQS 470
SS+R S
Sbjct: 1064 RSSSDRASS 1072
Score = 42 (19.8 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 20/84 (23%), Positives = 35/84 (41%)
Query: 296 QSTADNSTELGARTLRRCRDLQDRIQAIREN--W--SALQNNSLRFSSIPVESGTKHRKR 351
+S++D ++ R+ RD + R W S ++ S SS + ++R
Sbjct: 1064 RSSSDRASSQDRAKRRKDRDREHRRGPWGHGRCWRKSRSRSGSPGSSSCERHESRRRKRR 1123
Query: 352 HNVSEVSQERSGQPCPSTSGTGQH 375
H+ S S+ R G P S +H
Sbjct: 1124 HSGSR-SRGRDGSPHSSLERDRRH 1146
Score = 41 (19.5 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 541 DVLPSSSKIVDPEGKVLAESKARKYDHAKCEIQSLVKLNLKCLSRDKRLEYDAFKKVAKL 600
DV+P++S++ G+ A ++ R+ + + + N +S +R+++ ++ L
Sbjct: 260 DVVPTTSRLRPRVGRTRAIARTRQSERVRATV------NRNRISSARRVQHVPRYLMSSL 313
Query: 601 ATHTILA-SCGL 611
TI A + GL
Sbjct: 314 LDETIEAVATGL 325
>UNIPROTKB|J9P712 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000046673 Uniprot:J9P712
Length = 1626
Score = 171 (65.3 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 44/138 (31%), Positives = 60/138 (43%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVF 65
+ SC ICL G ++C HYFC CI+EW+K + CP+ + F I + F
Sbjct: 100 AESCPICLNTFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTIFKCICIRAR---F 156
Query: 66 PRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYC 125
+ +P + G DP C VC + E LLLCD CD H C
Sbjct: 157 GGKILKKIPVENARAG-----EEEEEDP---TFCEVCGRSDREDRLLLCDGCDAGYHMEC 208
Query: 126 VGMG-NAVPEGDWFCHDC 142
+ VP +WFC +C
Sbjct: 209 LDPPLQEVPVDEWFCPEC 226
Score = 48 (22.0 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 311 RRCRDLQDRI-QAIRENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQP 365
RR R ++R + R W + + R S P T+HR R + S E+ +P
Sbjct: 1129 RRHRHPRERSRERPRIRWGSHERRKRRSRS-PRSPSTEHRSREHQRPRSHEKRPRP 1183
Score = 47 (21.6 bits), Expect = 7.3e-08, Sum P(3) = 7.3e-08
Identities = 22/99 (22%), Positives = 39/99 (39%)
Query: 427 KQAMNTRSSLHDAERQQPGNRSVM--SDRRNQNTAMTV-ESSERLQSTYSTGLAQSPGNG 483
K+A R+S + R + G+ S DR +++ + V E + Q T S G S +
Sbjct: 996 KKAKRKRASAREHRRTRSGSHSGSRSGDRSSRSVSPPVGEDHPKRQQTKSRGRRSSSDHS 1055
Query: 484 KGNIQNQSNVCNFKGARLMGKSICGGSSSIPNKQGDSSS 522
+ + + +G R S G ++ G S
Sbjct: 1056 SSHERAKRKKAKEEGRRRKRDSWGHGRRRSRSRSGSPGS 1094
Score = 46 (21.3 bits), Expect = 9.2e-08, Sum P(3) = 9.2e-08
Identities = 23/100 (23%), Positives = 38/100 (38%)
Query: 288 TSRNGRMDQSTADNSTELGARTLRRCRDLQDRIQAIRENWSALQNNSLRFSSIPVESG-- 345
T GR S +S E R ++ ++ R + R++W + S S P S
Sbjct: 1043 TKSRGRRSSSDHSSSHERAKR--KKAKEEGRRRK--RDSWGHGRRRSRSRSGSPGSSSHE 1098
Query: 346 ---TKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGS 382
++ RKR S+ R P S +H ++ S
Sbjct: 1099 RRESRRRKRRRSGSRSRGRECSPASSLDRARRHRHPRERS 1138
Score = 44 (20.5 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 541 DVLPSSSKIVDPEGKVLAESKARKYDHAKCEIQSLVKLNLKCLSRDKRLEYDAFKKVAKL 600
DV+P++S++ G+ A ++ R+ + + + N +S +R+++ ++ L
Sbjct: 251 DVVPTTSRLRPHAGRTRAIARTRQSERVRATV------NRNRISTARRIQHVPRYLMSSL 304
Query: 601 ATHTILA-SCGL 611
TI A + GL
Sbjct: 305 LDETIEAVAAGL 316
Score = 43 (20.2 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 28/98 (28%), Positives = 43/98 (43%)
Query: 528 PVPGTSYSHIGE---HDVLPSSSKIVDPEGKVLAESKARKYDHAK-CEIQSL----VKLN 579
PVP TS + E H S+S+ + AE KA+ ++ K +Q VKL
Sbjct: 1497 PVP-TSLATASEPAGHSTGASNSEERTAAPRPAAE-KAKNEEYMKKLHMQERAVEEVKLA 1554
Query: 580 LKCLSRDKRLEYDAFKKVAKLATHTILASCGLEHPKSG 617
+K + + + D +K + + A I C H KSG
Sbjct: 1555 IKPFYQKREVTKDEYKDILRKAVQKI---C---HSKSG 1586
Score = 43 (20.2 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 351 RHNVSEVSQERSGQPCPSTSGTGQH-LRSQDGSSCDS 386
R VS + E + QP P G + L QD + S
Sbjct: 1306 RREVSLIHGEDAAQPPPQAQGPDEKPLLQQDAAGAGS 1342
Score = 42 (19.8 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 29/111 (26%), Positives = 46/111 (41%)
Query: 349 RKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSSCD-SHDVGKAWKMMKTAKSMLRKSE 407
RKR + E + RSG S SG+ RS D SS S VG+ + KS R+S
Sbjct: 1000 RKRASAREHRRTRSG----SHSGS----RSGDRSSRSVSPPVGEDHPKRQQTKSRGRRSS 1051
Query: 408 RA-SNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQN 457
S+ + +K K ++ ++ R + G+ S R ++
Sbjct: 1052 SDHSSSHERAKRKKAKEEGRRRKRDSWGHGRRRSRSRSGSPGSSSHERRES 1102
Score = 37 (18.1 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 347 KHRKRHNVSEVSQERSGQ 364
+H +RH +E +E Q
Sbjct: 1605 RHMRRHRRAEAGEEAPAQ 1622
>UNIPROTKB|F1PXY6 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000010559 Uniprot:F1PXY6
Length = 1637
Score = 171 (65.3 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 44/138 (31%), Positives = 60/138 (43%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVF 65
+ SC ICL G ++C HYFC CI+EW+K + CP+ + F I + F
Sbjct: 109 AESCPICLNTFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTIFKCICIRAR---F 165
Query: 66 PRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYC 125
+ +P + G DP C VC + E LLLCD CD H C
Sbjct: 166 GGKILKKIPVENARAG-----EEEEEDP---TFCEVCGRSDREDRLLLCDGCDAGYHMEC 217
Query: 126 VGMG-NAVPEGDWFCHDC 142
+ VP +WFC +C
Sbjct: 218 LDPPLQEVPVDEWFCPEC 235
Score = 48 (22.0 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 311 RRCRDLQDRI-QAIRENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQP 365
RR R ++R + R W + + R S P T+HR R + S E+ +P
Sbjct: 1141 RRHRHPRERSRERPRIRWGSHERRKRRSRS-PRSPSTEHRSREHQRPRSHEKRPRP 1195
Score = 47 (21.6 bits), Expect = 7.5e-08, Sum P(3) = 7.5e-08
Identities = 22/99 (22%), Positives = 39/99 (39%)
Query: 427 KQAMNTRSSLHDAERQQPGNRSVM--SDRRNQNTAMTV-ESSERLQSTYSTGLAQSPGNG 483
K+A R+S + R + G+ S DR +++ + V E + Q T S G S +
Sbjct: 1008 KKAKRKRASAREHRRTRSGSHSGSRSGDRSSRSVSPPVGEDHPKRQQTKSRGRRSSSDHS 1067
Query: 484 KGNIQNQSNVCNFKGARLMGKSICGGSSSIPNKQGDSSS 522
+ + + +G R S G ++ G S
Sbjct: 1068 SSHERAKRKKAKEEGRRRKRDSWGHGRRRSRSRSGSPGS 1106
Score = 46 (21.3 bits), Expect = 9.4e-08, Sum P(3) = 9.4e-08
Identities = 23/100 (23%), Positives = 38/100 (38%)
Query: 288 TSRNGRMDQSTADNSTELGARTLRRCRDLQDRIQAIRENWSALQNNSLRFSSIPVESG-- 345
T GR S +S E R ++ ++ R + R++W + S S P S
Sbjct: 1055 TKSRGRRSSSDHSSSHERAKR--KKAKEEGRRRK--RDSWGHGRRRSRSRSGSPGSSSHE 1110
Query: 346 ---TKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGS 382
++ RKR S+ R P S +H ++ S
Sbjct: 1111 RRESRRRKRRRSGSRSRGRECSPASSLDRARRHRHPRERS 1150
Score = 44 (20.5 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 16/72 (22%), Positives = 36/72 (50%)
Query: 541 DVLPSSSKIVDPEGKVLAESKARKYDHAKCEIQSLVKLNLKCLSRDKRLEYDAFKKVAKL 600
DV+P++S++ G+ A ++ R+ + + + N +S +R+++ ++ L
Sbjct: 260 DVVPTTSRLRPHAGRTRAIARTRQSERVRATV------NRNRISTARRIQHVPRYLMSSL 313
Query: 601 ATHTILA-SCGL 611
TI A + GL
Sbjct: 314 LDETIEAVAAGL 325
Score = 43 (20.2 bits), Expect = 6.0e-08, Sum P(3) = 6.0e-08
Identities = 28/98 (28%), Positives = 43/98 (43%)
Query: 528 PVPGTSYSHIGE---HDVLPSSSKIVDPEGKVLAESKARKYDHAK-CEIQSL----VKLN 579
PVP TS + E H S+S+ + AE KA+ ++ K +Q VKL
Sbjct: 1509 PVP-TSLATASEPAGHSTGASNSEERTAAPRPAAE-KAKNEEYMKKLHMQERAVEEVKLA 1566
Query: 580 LKCLSRDKRLEYDAFKKVAKLATHTILASCGLEHPKSG 617
+K + + + D +K + + A I C H KSG
Sbjct: 1567 IKPFYQKREVTKDEYKDILRKAVQKI---C---HSKSG 1598
Score = 43 (20.2 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 351 RHNVSEVSQERSGQPCPSTSGTGQH-LRSQDGSSCDS 386
R VS + E + QP P G + L QD + S
Sbjct: 1318 RREVSLIHGEDAAQPPPQAQGPDEKPLLQQDAAGAGS 1354
Score = 42 (19.8 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 29/111 (26%), Positives = 46/111 (41%)
Query: 349 RKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSSCD-SHDVGKAWKMMKTAKSMLRKSE 407
RKR + E + RSG S SG+ RS D SS S VG+ + KS R+S
Sbjct: 1012 RKRASAREHRRTRSG----SHSGS----RSGDRSSRSVSPPVGEDHPKRQQTKSRGRRSS 1063
Query: 408 RA-SNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQN 457
S+ + +K K ++ ++ R + G+ S R ++
Sbjct: 1064 SDHSSSHERAKRKKAKEEGRRRKRDSWGHGRRRSRSRSGSPGSSSHERRES 1114
Score = 37 (18.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 347 KHRKRHNVSEVSQERSGQ 364
+H +RH +E +E Q
Sbjct: 1617 RHMRRHRRAEAGEEAPAQ 1634
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 145 (56.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 81/418 (19%), Positives = 172/418 (41%)
Query: 151 NAEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEIVNFGGSQEVVENS---GSERST 207
++E+ + +E V VS +S SE +++ V+ S +V+ +S S
Sbjct: 264 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEV 323
Query: 208 VETVSDIVRTG--GNQNTVECSGPDCIGADTIINSHEMPPGDAGFALFEIVSSIPHPKES 265
V + S++ + + + V S + + + +S E+ + EIVSS S
Sbjct: 324 VSSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSS 383
Query: 266 LYRFWNSHP-VSPRRGIVILDNATSRNGRMDQST-ADNSTELGARTLRRCRDLQDRIQAI 323
+S VS +V + S + + S+ +S+E+ + + ++ Q I
Sbjct: 384 SSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSS-----EVSSSSQVI 438
Query: 324 RENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSS 383
+ ++ + SS V S ++ VS S+ S S+S S + SS
Sbjct: 439 SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSS--SSEVSS 496
Query: 384 CDSHDVGKAWKMMKTAKSMLRKSERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQ 443
S V + ++ +++ + SE +S+ SS + +V++S Q +++ + +
Sbjct: 497 SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSS---EVSSSSQVISSSEIVSSSSEVS 553
Query: 444 PGNRSVMSDRRNQNTAMTVESSERLQSTYSTGLAQSPGNGKGNIQNQSNVCNFKGARLMG 503
+ V+S +++ V SS S+ S + S + + + S V + +
Sbjct: 554 SSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSS 613
Query: 504 KSICGGSSSIPNKQGDSSSINLTGPVPGTSYSHI-GEHDVLPSSSKIVDPEGKVLAES 560
S SS + + SSS ++ +S S + +++ SSS++ +V++ S
Sbjct: 614 SSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSS 671
Score = 131 (51.2 bits), Expect = 0.00018, P = 0.00018
Identities = 83/400 (20%), Positives = 165/400 (41%)
Query: 166 SVSEVVVQNSDSEHNNAETVAEIVNFGGSQEVVENSGSERSTVETVSDIVRTGGNQNTVE 225
S SE+V +S+ +++E V+ S EVV +S SE S+ VS +
Sbjct: 242 SSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSS-SEVSSSSEVSSSSEVSSSSEV-- 298
Query: 226 CSGPDCIGADTIINSHEMPPGDAGFALFEIVSSIPHPKESLYRFWNSHPVSPRRGIVILD 285
S + + +I+S E+ + E+VSS S +S VS +
Sbjct: 299 SSSSEVSSSSQVISSSEVVSSSS-----EVVSSSSEVSSSSEVSSSSEVVSSSSEVSSSS 353
Query: 286 NATSRNGRMDQSTADNSTELGARTLRRCRDLQDRIQAIRENWSALQNNSLRFSSIPVESG 345
+S + S +S+E+ + + + + + E S+ + S SS V S
Sbjct: 354 EVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVS---SSSEVSSS 410
Query: 346 TKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTAKSMLRK 405
++ VS S+ S S+S Q + S + S S +V + +++ ++ +
Sbjct: 411 SEVSSSSEVSSSSEVSSSSEVSSSS---QVISSSEVVSSSS-EVSSSSEVVSSSSEVSSS 466
Query: 406 SE--RASNVCKSSKNLNIK--VNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMT 461
SE +S V SS+ + V++S + ++ S + + + + V+S +++
Sbjct: 467 SEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSE 526
Query: 462 VESSERLQSTYSTGLAQSPGNGKGNIQNQSNVCNFKGARLMGKSICGGSSSIPNKQGDSS 521
V SS + S+ + + + + S+ + + S SSS + SS
Sbjct: 527 VSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSS---EVSSSS 583
Query: 522 SINLTGPVPGTSYSHIGEHDVLPSSSKIVDPEGKVLAESK 561
++ + V +S I +V+ SSS++V +V + S+
Sbjct: 584 EVSSSSEVSSSSQV-ISSSEVVSSSSEVVSSSSEVSSSSE 622
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 145 (56.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 81/418 (19%), Positives = 172/418 (41%)
Query: 151 NAEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEIVNFGGSQEVVENS---GSERST 207
++E+ + +E V VS +S SE +++ V+ S +V+ +S S
Sbjct: 264 SSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEV 323
Query: 208 VETVSDIVRTG--GNQNTVECSGPDCIGADTIINSHEMPPGDAGFALFEIVSSIPHPKES 265
V + S++ + + + V S + + + +S E+ + EIVSS S
Sbjct: 324 VSSSSEVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSS 383
Query: 266 LYRFWNSHP-VSPRRGIVILDNATSRNGRMDQST-ADNSTELGARTLRRCRDLQDRIQAI 323
+S VS +V + S + + S+ +S+E+ + + ++ Q I
Sbjct: 384 SSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEVSSSS-----EVSSSSQVI 438
Query: 324 RENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSS 383
+ ++ + SS V S ++ VS S+ S S+S S + SS
Sbjct: 439 SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSS--SSEVSS 496
Query: 384 CDSHDVGKAWKMMKTAKSMLRKSERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQ 443
S V + ++ +++ + SE +S+ SS + +V++S Q +++ + +
Sbjct: 497 SSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSS---EVSSSSQVISSSEIVSSSSEVS 553
Query: 444 PGNRSVMSDRRNQNTAMTVESSERLQSTYSTGLAQSPGNGKGNIQNQSNVCNFKGARLMG 503
+ V+S +++ V SS S+ S + S + + + S V + +
Sbjct: 554 SSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSQVISSSEVVSSSSEVVSS 613
Query: 504 KSICGGSSSIPNKQGDSSSINLTGPVPGTSYSHI-GEHDVLPSSSKIVDPEGKVLAES 560
S SS + + SSS ++ +S S + +++ SSS++ +V++ S
Sbjct: 614 SSEVSSSSEVSSSSEVSSSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSS 671
Score = 131 (51.2 bits), Expect = 0.00018, P = 0.00018
Identities = 83/400 (20%), Positives = 165/400 (41%)
Query: 166 SVSEVVVQNSDSEHNNAETVAEIVNFGGSQEVVENSGSERSTVETVSDIVRTGGNQNTVE 225
S SE+V +S+ +++E V+ S EVV +S SE S+ VS +
Sbjct: 242 SSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSS-SEVSSSSEVSSSSEVSSSSEV-- 298
Query: 226 CSGPDCIGADTIINSHEMPPGDAGFALFEIVSSIPHPKESLYRFWNSHPVSPRRGIVILD 285
S + + +I+S E+ + E+VSS S +S VS +
Sbjct: 299 SSSSEVSSSSQVISSSEVVSSSS-----EVVSSSSEVSSSSEVSSSSEVVSSSSEVSSSS 353
Query: 286 NATSRNGRMDQSTADNSTELGARTLRRCRDLQDRIQAIRENWSALQNNSLRFSSIPVESG 345
+S + S +S+E+ + + + + + E S+ + S SS V S
Sbjct: 354 EVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVS---SSSEVSSS 410
Query: 346 TKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTAKSMLRK 405
++ VS S+ S S+S Q + S + S S +V + +++ ++ +
Sbjct: 411 SEVSSSSEVSSSSEVSSSSEVSSSS---QVISSSEVVSSSS-EVSSSSEVVSSSSEVSSS 466
Query: 406 SE--RASNVCKSSKNLNIK--VNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMT 461
SE +S V SS+ + V++S + ++ S + + + + V+S +++
Sbjct: 467 SEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSE 526
Query: 462 VESSERLQSTYSTGLAQSPGNGKGNIQNQSNVCNFKGARLMGKSICGGSSSIPNKQGDSS 521
V SS + S+ + + + + S+ + + S SSS + SS
Sbjct: 527 VSSSSEVSSSSQVISSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSS---EVSSSS 583
Query: 522 SINLTGPVPGTSYSHIGEHDVLPSSSKIVDPEGKVLAESK 561
++ + V +S I +V+ SSS++V +V + S+
Sbjct: 584 EVSSSSEVSSSSQV-ISSSEVVSSSSEVVSSSSEVSSSSE 622
>UNIPROTKB|F1SHI5 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008623 "CHRAC" evidence=IEA] [GO:0006261
"DNA-dependent DNA replication" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
GO:GO:0006261 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 CTD:11177 KO:K11655 OMA:SSFQNNV
GO:GO:0008623 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:CT842119 EMBL:CU469145
RefSeq:NP_001231088.1 UniGene:Ssc.6274 Ensembl:ENSSSCT00000002190
GeneID:100151954 KEGG:ssc:100151954 ArrayExpress:F1SHI5
Uniprot:F1SHI5
Length = 1557
Score = 134 (52.2 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 41/130 (31%), Positives = 58/130 (44%)
Query: 98 RCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR-----DEHDN 151
RC +C+ ++LCD CD HTYCV VPEGDWFC +C +
Sbjct: 1150 RCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPKQRSRRLSSRQR 1209
Query: 152 AEIETDTETVFG-DGSVSEVVVQNSDSEHNNAETVAEIV-NFGGSQEVVENSGSERSTVE 209
+E+D E +G EV + D E + E E+ + SQE E S +R +
Sbjct: 1210 PSLESDEELEDSLEGEDDEV--DDDDEEGQSEEEEYEVEQDEDDSQEEEEVSPPKRGRPQ 1267
Query: 210 TVSDIVRTGG 219
V ++T G
Sbjct: 1268 -VRLSIKTRG 1276
Score = 61 (26.5 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 30/105 (28%), Positives = 51/105 (48%)
Query: 354 VSEVSQERSGQPCPSTSGTG-QHLRSQDGSSCDSHDVGKA--WKMMKTAKSMLRKSERAS 410
+S + RS + S T + LR S+ SHD +A + + + + R + A+
Sbjct: 1307 LSSKTTSRSLRKIKSAPPTETKSLRIASRSTRQSHDPLQADVFVELLSPRRKRRGRKSAN 1366
Query: 411 NVCKSSKNL-NIKVNASKQAMNTRS-------SLHDAERQQPGNR 447
N +SS NL N +V A+K + +RS SL D+E ++ G +
Sbjct: 1367 NTPESSPNLPNFRVIATKSSEQSRSLNVASKLSLQDSESKRRGRK 1411
>FB|FBgn0034410 [details] [associations]
symbol:Topors "Topoisomerase I-interacting protein"
species:7227 "Drosophila melanogaster" [GO:0044547 "DNA
topoisomerase binding" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005652 "nuclear lamina" evidence=IDA]
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 Pfam:PF00097 Prosite:PS00518
EMBL:AE013599 GO:GO:0007095 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0005700 GO:GO:0000209
InterPro:IPR017907 GO:GO:0042787 GO:GO:0006997 GO:GO:0005521
GO:GO:0005652 EMBL:AY122186 RefSeq:NP_611388.1 UniGene:Dm.10778
ProteinModelPortal:Q9V8P9 SMR:Q9V8P9 IntAct:Q9V8P9 STRING:Q9V8P9
PaxDb:Q9V8P9 PRIDE:Q9V8P9 EnsemblMetazoa:FBtr0086570
EnsemblMetazoa:FBtr0331977 GeneID:37188 KEGG:dme:Dmel_CG15104
CTD:10210 FlyBase:FBgn0034410 eggNOG:NOG244178
GeneTree:ENSGT00530000064170 InParanoid:Q9V8P9 KO:K10631
OMA:FIHELFN OrthoDB:EOG42V6ZJ PhylomeDB:Q9V8P9 ChiTaRS:TOPORS
GenomeRNAi:37188 NextBio:802385 Bgee:Q9V8P9 GermOnline:CG15104
Uniprot:Q9V8P9
Length = 1038
Score = 124 (48.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 8 SCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
+C ICL + DSC H FCF C+ EW+KI+ +CP+CK+ F +I
Sbjct: 101 NCAICLSRCRRKCF--TDSCMHQFCFKCLCEWSKIKPECPLCKQPFRTI 147
Score = 65 (27.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 31/167 (18%), Positives = 63/167 (37%)
Query: 325 ENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQ-DGSS 383
+NW + + R + + +K S ++ SG S S + H S D S
Sbjct: 614 KNWKLVMAQTRRLDQLRTLRSIRSKKSRRSSMPARSDSGSSPSSCSSSSFHFSSSSDEDS 673
Query: 384 CDSHDVGKAWKMMKTAKSML--RKSERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAER 441
DS K+ K + ++S++ S ++S+ K + + S +R
Sbjct: 674 SDSSTTNSEPPKKKSRKRVANNKRSKKESIGKRTSRKRKAKDQNMEMLEQQQISQKKPQR 733
Query: 442 QQPGNRSVMSDRRNQNTAMTVESSERLQSTYSTGLAQSPGNGKGNIQ 488
Q + S +++ + ESS + + + + S + N+Q
Sbjct: 734 QPESSSDSPSSSDDESGGDSSESSGQPNTNNNKSSSDSDDDSAVNMQ 780
Score = 54 (24.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 34/124 (27%), Positives = 54/124 (43%)
Query: 358 SQERSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTAKSMLRKSERASNVCKSSK 417
S + SG S+ +GQ + + SS DS D A M +A K+E K K
Sbjct: 745 SDDESGGD--SSESSGQPNTNNNKSSSDSDD-DSAVNMQLSALRATLKAEATLEDRKPVK 801
Query: 418 NLNIKVNASKQA--MNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTVESSERLQSTYSTG 475
L +++ QA +++R + E +PG S RR+ + + S L S+ ST
Sbjct: 802 -LELQLPDDDQAGPLHSRMTPSPREDNEPGC-SAPKRRRSCSHSNQSSQSASLASS-STA 858
Query: 476 LAQS 479
+ S
Sbjct: 859 TSSS 862
Score = 48 (22.0 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 33/175 (18%), Positives = 64/175 (36%)
Query: 357 VSQERSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKM----------MKTAKSMLRKS 406
+++ RS Q + Q L +S + + GK WK+ ++T +S+ K
Sbjct: 580 IAENRSTQSPLDLASRDQGLFMGPSTSGAAANRGKNWKLVMAQTRRLDQLRTLRSIRSKK 639
Query: 407 ERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTVESSE 466
R S++ S + + + S + + SS + S ++++ + S+
Sbjct: 640 SRRSSMPARSDSGSSPSSCSSSSFHFSSSSDEDSSDSSTTNSEPPKKKSRKRVANNKRSK 699
Query: 467 RLQSTYSTGLAQSPGNGKGNIQNQSNVCNFKGARLMGKSICGGSSSIPNKQGDSS 521
+ T + + + Q + K R S SSS GDSS
Sbjct: 700 KESIGKRTSRKRKAKDQNMEMLEQQQISQKKPQRQPESSSDSPSSSDDESGGDSS 754
>UNIPROTKB|F1N329 [details] [associations]
symbol:TOPORS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0044547 "DNA topoisomerase
binding" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0036064 "cilium basal body"
evidence=IEA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IEA] [GO:0019789 "SUMO ligase activity" evidence=IEA]
[GO:0016925 "protein sumoylation" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003823
"antigen binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000930 "gamma-tubulin complex" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0043015 "gamma-tubulin binding" evidence=IDA] [GO:0070936
"protein K48-linked ubiquitination" evidence=IEA] [GO:0051457
"maintenance of protein location in nucleus" evidence=IEA]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0005813 GO:GO:0045893
GO:GO:0008630 GO:GO:0043161 GO:GO:0005814 GO:GO:0003823
GO:GO:0046872 GO:GO:0003677 GO:GO:0016607 GO:GO:0016605
GO:GO:0008270 GO:GO:0042127 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000922 GO:GO:0000930 GO:GO:0051457
InterPro:IPR017907 GO:GO:0070936 GO:GO:0032391 GO:GO:0051443
GO:GO:0043015 GO:GO:0016925 GO:GO:0006513 GO:GO:0036064
GO:GO:0019789 GeneTree:ENSGT00530000064170 OMA:DIINFRR
EMBL:DAAA02021989 IPI:IPI00713224 UniGene:Bt.56498
Ensembl:ENSBTAT00000048966 NextBio:20873711 ArrayExpress:F1N329
Uniprot:F1N329
Length = 1100
Score = 125 (49.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C ICL D ++ +D C H FCF C+ EW+K +++CP+CK+ F SI
Sbjct: 166 CPICL-DRFDNV-SYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSI 211
Score = 63 (27.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 45/200 (22%), Positives = 76/200 (38%)
Query: 182 AETVAEIVNFGGSQEVVENSGSERSTVETVS-DIVRTGGNQNTVECSGP-DCIGADTIIN 239
AE E+V EV S + T++T + + G+ + CS P +G D IN
Sbjct: 552 AERTPELVELSSDSEVELGSYEKMETMKTQEQEQSYSSGDSDVSRCSSPRSVVGKDEQIN 611
Query: 240 SHEMPPGDAGFALFEIVSSIPHPKESLYRFWNSHPVSPRRGIVILDNATSRNGRMDQSTA 299
D+G ++S K S+ S RG + T R+ + +S +
Sbjct: 612 KGRC---DSGTK----INSKKEEKRSISLSSLRDLSSSLRGDRVYSPYTRRHRKRGRSRS 664
Query: 300 DNSTELGARTLRRCRDLQDRIQAIRENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQ 359
+S R D ++R + + + + R SS P G + +KR + S
Sbjct: 665 SDSYSQS----RSGHDQKNRRKHHGKKRMKGKRSRSRESSRP--RGRRDKKRSRTRDSSW 718
Query: 360 ERSGQPCPSTSGTGQHLRSQ 379
R Q +S + RS+
Sbjct: 719 SRRSQTLSLSSESSSRSRSR 738
>GENEDB_PFALCIPARUM|PFF1185w [details] [associations]
symbol:PFF1185w "iswi protein homologue"
species:5833 "Plasmodium falciparum" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00490 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844505 RefSeq:XP_966228.1 ProteinModelPortal:C6KT82
IntAct:C6KT82 PRIDE:C6KT82 EnsemblProtists:PFF1185w:mRNA
GeneID:3885918 KEGG:pfa:PFF1185w EuPathDB:PlasmoDB:PF3D7_0624600
OMA:EERMAFR ProtClustDB:CLSZ2515339 Uniprot:C6KT82
Length = 2719
Score = 117 (46.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 39/157 (24%), Positives = 69/157 (43%)
Query: 31 FCFVCIMEWAKIES--KCPMCKRRFTSIRRPPKDGVFPRERFVVVPKRDQIYGGFGIASS 88
+C +C + + + +C CK++F +G+ E+ K + Y + +
Sbjct: 7 WCTLCRENFEEGDECIQCKQCKKKFHR-ECLQAEGLMDNEQL----KDIKNYVCYQCINE 61
Query: 89 RTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGD-WFCHDCTVLRD 147
P RC +C+ + +LLLCD C + H C+G+ A PE + W+C C D
Sbjct: 62 DDDIPENEDRCKICREKSANLILLLCDGCPNSYHVSCLGLA-AEPESEKWYCPICKP--D 118
Query: 148 EHDNAEIETDTETVFGDGSVSEVVVQNSDSEHNNAET 184
+H N ++ + G V+ N + EH N+ T
Sbjct: 119 DHKNLDVRRMRK-----G----FVLDNMNGEHVNSST 146
Score = 79 (32.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 44/186 (23%), Positives = 81/186 (43%)
Query: 323 IRENWSALQNNSLRFSSIPVESG--TKHRKR---HNVSEVSQERSGQPCPSTSGTGQH-L 376
I +N S +N+S SS +S TK++ HN S + + + TG + +
Sbjct: 2258 INKNSSNTKNSSNTKSSSNTKSSSNTKNKNNKNNHNNSFLESATTAEDFLRGITTGNNNI 2317
Query: 377 RSQDGSSCDSHDVGKAWKMMKTAKSMLRKS-ERASNVCKSSKNLNIKVNASK-QAMNTRS 434
+ SS +D K K + KS+++ + N K+S +L+ K + +N +
Sbjct: 2318 FNLVSSSNSPYDKNKKLKDDEFEKSIIQNYLNKMKNSLKNSSHLDKNTIKEKLKELNYVN 2377
Query: 435 SLHDAERQQPGNRSVMSDRRNQN----TAMTVESSERL-QSTYSTGLAQSPGNGKGNIQN 489
S ++ + N +++++ N N T E+S R + + G GN K N
Sbjct: 2378 SRSNSNTKNNMNTNIINNNNNNNNNQHTISAQENSLRFAKEIFKNGAFDKNGNFK-LYAN 2436
Query: 490 QSNVCN 495
+ N+CN
Sbjct: 2437 KGNLCN 2442
Score = 69 (29.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 389 VGKAWKMMKTAKSMLRKSERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRS 448
+ KA + ++ KS L + +N K+ K+ + N +K + NT++S + + N
Sbjct: 2222 LNKAKEFLRVTKSNLINNGNNNNNNKNKKSSSNSKNINKNSSNTKNS---SNTKSSSNTK 2278
Query: 449 VMSDRRNQNTAMTVESSERLQSTYSTGLAQSPGNGKGNIQN 489
S+ +N+N +S +T + + G NI N
Sbjct: 2279 SSSNTKNKNNKNNHNNSFLESATTAEDFLRGITTGNNNIFN 2319
>UNIPROTKB|C6KT82 [details] [associations]
symbol:PFF1185w "Smarca-related protein" species:36329
"Plasmodium falciparum 3D7" [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00490 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844505 RefSeq:XP_966228.1 ProteinModelPortal:C6KT82
IntAct:C6KT82 PRIDE:C6KT82 EnsemblProtists:PFF1185w:mRNA
GeneID:3885918 KEGG:pfa:PFF1185w EuPathDB:PlasmoDB:PF3D7_0624600
OMA:EERMAFR ProtClustDB:CLSZ2515339 Uniprot:C6KT82
Length = 2719
Score = 117 (46.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 39/157 (24%), Positives = 69/157 (43%)
Query: 31 FCFVCIMEWAKIES--KCPMCKRRFTSIRRPPKDGVFPRERFVVVPKRDQIYGGFGIASS 88
+C +C + + + +C CK++F +G+ E+ K + Y + +
Sbjct: 7 WCTLCRENFEEGDECIQCKQCKKKFHR-ECLQAEGLMDNEQL----KDIKNYVCYQCINE 61
Query: 89 RTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGD-WFCHDCTVLRD 147
P RC +C+ + +LLLCD C + H C+G+ A PE + W+C C D
Sbjct: 62 DDDIPENEDRCKICREKSANLILLLCDGCPNSYHVSCLGLA-AEPESEKWYCPICKP--D 118
Query: 148 EHDNAEIETDTETVFGDGSVSEVVVQNSDSEHNNAET 184
+H N ++ + G V+ N + EH N+ T
Sbjct: 119 DHKNLDVRRMRK-----G----FVLDNMNGEHVNSST 146
Score = 79 (32.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 44/186 (23%), Positives = 81/186 (43%)
Query: 323 IRENWSALQNNSLRFSSIPVESG--TKHRKR---HNVSEVSQERSGQPCPSTSGTGQH-L 376
I +N S +N+S SS +S TK++ HN S + + + TG + +
Sbjct: 2258 INKNSSNTKNSSNTKSSSNTKSSSNTKNKNNKNNHNNSFLESATTAEDFLRGITTGNNNI 2317
Query: 377 RSQDGSSCDSHDVGKAWKMMKTAKSMLRKS-ERASNVCKSSKNLNIKVNASK-QAMNTRS 434
+ SS +D K K + KS+++ + N K+S +L+ K + +N +
Sbjct: 2318 FNLVSSSNSPYDKNKKLKDDEFEKSIIQNYLNKMKNSLKNSSHLDKNTIKEKLKELNYVN 2377
Query: 435 SLHDAERQQPGNRSVMSDRRNQN----TAMTVESSERL-QSTYSTGLAQSPGNGKGNIQN 489
S ++ + N +++++ N N T E+S R + + G GN K N
Sbjct: 2378 SRSNSNTKNNMNTNIINNNNNNNNNQHTISAQENSLRFAKEIFKNGAFDKNGNFK-LYAN 2436
Query: 490 QSNVCN 495
+ N+CN
Sbjct: 2437 KGNLCN 2442
Score = 69 (29.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 23/101 (22%), Positives = 45/101 (44%)
Query: 389 VGKAWKMMKTAKSMLRKSERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRS 448
+ KA + ++ KS L + +N K+ K+ + N +K + NT++S + + N
Sbjct: 2222 LNKAKEFLRVTKSNLINNGNNNNNNKNKKSSSNSKNINKNSSNTKNS---SNTKSSSNTK 2278
Query: 449 VMSDRRNQNTAMTVESSERLQSTYSTGLAQSPGNGKGNIQN 489
S+ +N+N +S +T + + G NI N
Sbjct: 2279 SSSNTKNKNNKNNHNNSFLESATTAEDFLRGITTGNNNIFN 2319
>UNIPROTKB|Q9NRL2 [details] [associations]
symbol:BAZ1A "Bromodomain adjacent to zinc finger domain
protein 1A" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008623 "CHRAC" evidence=IDA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0016590 "ACF complex" evidence=TAS] [GO:0004402
"histone acetyltransferase activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0006351 "transcription, DNA-dependent" evidence=NAS]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0006261 GO:GO:0006338 EMBL:CH471078
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0000228 EMBL:AF213467 EMBL:AF221130
EMBL:AB032252 EMBL:AL121603 EMBL:AL355885 EMBL:AF161435
EMBL:AL050089 IPI:IPI00383565 IPI:IPI00412415 PIR:T08738
RefSeq:NP_038476.2 RefSeq:NP_872589.1 UniGene:Hs.509140
ProteinModelPortal:Q9NRL2 SMR:Q9NRL2 IntAct:Q9NRL2
MINT:MINT-1183777 STRING:Q9NRL2 PhosphoSite:Q9NRL2 DMDM:116241266
PaxDb:Q9NRL2 PRIDE:Q9NRL2 Ensembl:ENST00000358716
Ensembl:ENST00000360310 Ensembl:ENST00000382422 GeneID:11177
KEGG:hsa:11177 UCSC:uc001wsk.3 UCSC:uc001wsl.3 CTD:11177
GeneCards:GC14M035221 H-InvDB:HIX0037904 HGNC:HGNC:960
HPA:HPA002730 MIM:605680 neXtProt:NX_Q9NRL2 PharmGKB:PA25270
HOGENOM:HOG000095179 HOVERGEN:HBG080889 InParanoid:Q9NRL2 KO:K11655
OMA:SSFQNNV OrthoDB:EOG49GKFR PhylomeDB:Q9NRL2 ChiTaRS:BAZ1A
GenomeRNAi:11177 NextBio:42529 ArrayExpress:Q9NRL2 Bgee:Q9NRL2
CleanEx:HS_BAZ1A Genevestigator:Q9NRL2 GermOnline:ENSG00000198604
GO:GO:0016590 GO:GO:0008623 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136 Uniprot:Q9NRL2
Length = 1556
Score = 138 (53.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 57/222 (25%), Positives = 87/222 (39%)
Query: 98 RCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCT-------VLRDEH 149
RC +C+ ++LCD CD HTYCV VPEGDWFC +C + +
Sbjct: 1150 RCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPKQRSRRLSSRQR 1209
Query: 150 DNAEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEIVNFGGSQEVVENSGSERSTVE 209
+ E + D E G G EV + + E E + SQE E S +R +
Sbjct: 1210 PSLESDEDVEDSMG-GEDDEVDGDEEEGQSEEEEYEVE-QDEDDSQEEEEVSLPKRGRPQ 1267
Query: 210 TVSDIVRTGGNQNTVECSGPDCIGADTIINSHEMPP-----GDAGFALFEIVSSIPHPKE 264
+ G ++ G S + P G +L +I S+ P +
Sbjct: 1268 VRLPVKTRGKLSSSFSSRGQQQEPGRYPSRSQQSTPKTTVSSKTGRSLRKINSAPPTETK 1327
Query: 265 SLYRFWNS--HPVSPRRGIVILDNATSRNGRMDQSTADNSTE 304
SL S H P + V ++ + R R + +A+N+ E
Sbjct: 1328 SLRIASRSTRHSHGPLQADVFVELLSPRRKRRGRKSANNTPE 1369
>UNIPROTKB|B7ZS37 [details] [associations]
symbol:baz2a "Bromodomain adjacent to zinc finger domain
protein 2A" species:8355 "Xenopus laevis" [GO:0000183 "chromatin
silencing at rDNA" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005677 "chromatin silencing complex"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0006306
"DNA methylation" evidence=ISS] [GO:0016575 "histone deacetylation"
evidence=ISS] [GO:0033553 "rDNA heterochromatin" evidence=ISS]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISS]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00384 SMART:SM00391 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0003723 SUPFAM:SSF54171 GO:GO:0000183 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0006306 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 GO:GO:0070577 InterPro:IPR018359 GO:GO:0005677
InterPro:IPR004022 InterPro:IPR018501 Pfam:PF02791 PROSITE:PS50827
CTD:11176 KO:K15224 GO:GO:0033553 GO:GO:0016575 Gene3D:3.30.890.10
EMBL:AY145834 EMBL:BC170384 EMBL:BC170386 RefSeq:NP_001082767.1
UniGene:Xl.5323 GeneID:398712 KEGG:xla:398712
Xenbase:XB-GENE-965905 Uniprot:B7ZS37
Length = 1698
Score = 138 (53.6 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 26/55 (47%), Positives = 31/55 (56%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLRDEHD 150
V C C+ + LLLLCD CD HTYC N +PEGDWFC C L+ E +
Sbjct: 1477 VTCLYCRKGDNDELLLLCDSCDRGCHTYCHRPRMNEIPEGDWFCPTCISLQSESE 1531
>UNIPROTKB|Q2T9V9 [details] [associations]
symbol:PHF10 "PHD finger protein 10" species:9913 "Bos
taurus" [GO:0071564 "npBAF complex" evidence=ISS] [GO:0007399
"nervous system development" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0007399
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0071564 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
GeneTree:ENSGT00530000063194 EMBL:BC111243 IPI:IPI00690509
RefSeq:NP_001033141.1 UniGene:Bt.91582 ProteinModelPortal:Q2T9V9
Ensembl:ENSBTAT00000005130 GeneID:507648 KEGG:bta:507648 CTD:55274
eggNOG:NOG279558 HOGENOM:HOG000286026 HOVERGEN:HBG053581
InParanoid:Q2T9V9 OMA:CETSSQD OrthoDB:EOG4BCDNG NextBio:20868158
ArrayExpress:Q2T9V9 Uniprot:Q2T9V9
Length = 410
Score = 125 (49.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C +C +E ++ CD+CD HT+CVG+G A+P G W C DC
Sbjct: 348 CIICGQPHHEEEMMFCDVCDRGYHTFCVGLG-AIPSGRWIC-DC 389
Score = 49 (22.3 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVC 35
CGICL + S RG+ + H C C
Sbjct: 292 CGICLKGKESSRRGKAEPLVH--CSQC 316
>TAIR|locus:2033691 [details] [associations]
symbol:AT1G67180 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048451 "petal formation" evidence=RCA] [GO:0048453 "sepal
formation" evidence=RCA] InterPro:IPR001841 InterPro:IPR018957
PROSITE:PS50089 SMART:SM00184 InterPro:IPR001357 Pfam:PF00097
Prosite:PS00518 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00292 SUPFAM:SSF52113 PROSITE:PS50172 InterPro:IPR017907
HSSP:P28990 EMBL:AC004146 IPI:IPI00547741 PIR:G96695
RefSeq:NP_176889.1 UniGene:At.50009 ProteinModelPortal:Q9ZW89
SMR:Q9ZW89 PRIDE:Q9ZW89 EnsemblPlants:AT1G67180.1 GeneID:843038
KEGG:ath:AT1G67180 TAIR:At1g67180 eggNOG:NOG311812
HOGENOM:HOG000077557 InParanoid:Q9ZW89 OMA:ICWTEFS PhylomeDB:Q9ZW89
ProtClustDB:CLSN2681961 Genevestigator:Q9ZW89 Uniprot:Q9ZW89
Length = 453
Score = 130 (50.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 46/153 (30%), Positives = 66/153 (43%)
Query: 8 SCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA-KIESK-----CPMCKRRFTSIRR-PP 60
SC IC E S RG I C H FC+ CI +WA ++ S+ CP+CK F +I +
Sbjct: 299 SCIIC-WTEFSSSRG-ILPCGHRFCYSCIQKWADRLVSERKKTTCPLCKSNFITITKIED 356
Query: 61 KDGVFPRERFVVVPKRDQIYGGFGIASS-----RTADPYAYVR-CNVCQGTTYESLLLLC 114
D + VP + +T +P C+ C T E LL+ C
Sbjct: 357 ADSSDQKIYSQTVPDLSSTNNILVVLPEEEEQRQTLNPLTRASGCSRCYLTEPEELLIRC 416
Query: 115 DLCDTAS-HTYCVGMGNAVPEGDWFCHDCTVLR 146
LC+ H+YC+ +P W C+ C L+
Sbjct: 417 HLCNFRRIHSYCLDP-YLLP---WTCNHCNDLQ 445
>UNIPROTKB|F1NFV8 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0008623 "CHRAC" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 GO:GO:0006261
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 OMA:SSFQNNV GO:GO:0008623
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
EMBL:AADN02003387 EMBL:AADN02003388 EMBL:AADN02003389
IPI:IPI00585200 Ensembl:ENSGALT00000016289 Uniprot:F1NFV8
Length = 1522
Score = 136 (52.9 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 69/284 (24%), Positives = 105/284 (36%)
Query: 98 RCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR-----DEHDN 151
RC VC+ ++LCD CD HTYC+ +PEGDWFC +C +
Sbjct: 1113 RCKVCRKKGDAESMVLCDGCDRGYHTYCIRPKLKIIPEGDWFCPECRPKQRSRRLSSRQR 1172
Query: 152 AEIETD---TETVFGDGSVSEVVVQNSDSEHNNAETVAEIVNFGGSQEVVENSGSERSTV 208
+E+D E + G+ S ++ S+ E E E SQE + S S+
Sbjct: 1173 PSVESDEEMAERIEGEEEASYDEMRQSEEEDYEEEHEEE----DESQEEEDMSPSKHGRP 1228
Query: 209 ETVSDIVRTGGNQNTVECSGPDCIGADTIINSHEMPPGDAGFA-------LFEIVS---S 258
+ + N S A S + P AG + L ++ S S
Sbjct: 1229 QVKFPLKMRAAKLNNPFSSRNIQRQARYASRSQQNTPKQAGSSSRVTRRGLRKVKSAPPS 1288
Query: 259 IPHPKESLYRFWNSHPVSPRRGIVILDNATSRNGRMDQSTADNSTELGARTLR-RCRDLQ 317
+ P L S + V ++ + R R + ADN+ E +L R D
Sbjct: 1289 VTKPTLRLSSRTTRQSQSSLQADVFVELLSPRRRRRGRKNADNTLENSPDSLGFRIVDST 1348
Query: 318 DRIQAIRENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQER 361
D + +R+ A SL S P G K + + + S R
Sbjct: 1349 DSNERVRKYPVAAPKLSLPVSE-PKRRGRKRQSTESSPQTSLNR 1391
>UNIPROTKB|E2RE69 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
EMBL:AAEX03005669 EMBL:AAEX03005670 Ensembl:ENSCAFT00000021125
NextBio:20855328 Uniprot:E2RE69
Length = 1525
Score = 139 (54.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 42/133 (31%), Positives = 59/133 (44%)
Query: 98 RCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR-----DEHDN 151
RC +C+ ++LCD CD HTYCV VPEGDWFC +C +
Sbjct: 1118 RCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPKQRSRRLSSRQR 1177
Query: 152 AEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEI-VNFGGSQEVVENSGSERSTVET 210
+E+D E G + V + D E + E EI + SQE E S +R +
Sbjct: 1178 PSLESDEEMEDSMGGEDDEV-DDDDEEGQSEEEEYEIDQDEDDSQEEEEVSPPKRGRPQ- 1235
Query: 211 VSDIVRTGGNQNT 223
V ++T G +T
Sbjct: 1236 VRLPIKTRGRIST 1248
Score = 48 (22.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 404 RKSERASNVCKSSKNL-NIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTV 462
RKS A+N ++S N N +V A+K + +RS ++ + S R+ Q+T
Sbjct: 1330 RKS--ANNTPENSPNFPNFRVIATKSSEKSRSLNVTSKLSLQDSESKRRGRKRQST---- 1383
Query: 463 ESSERLQSTYSTG 475
ESS + S+G
Sbjct: 1384 ESSPMTLNRRSSG 1396
Score = 41 (19.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 285 DNATSRNGRMDQSTADNSTELGARTLRR 312
D+ + R GR QST + L R+ R
Sbjct: 1370 DSESKRRGRKRQSTESSPMTLNRRSSGR 1397
Score = 37 (18.1 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 440 ERQQPGNRSVMSDRRNQNTAMTVESSE 466
+RQ PG + R Q+T T SS+
Sbjct: 1255 QRQDPGR---YTSRSQQSTPKTTVSSK 1278
>UNIPROTKB|J9P748 [details] [associations]
symbol:BAZ1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 CTD:11177
KO:K11655 OMA:SSFQNNV InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:AAEX03005669 EMBL:AAEX03005670
RefSeq:XP_537409.2 Ensembl:ENSCAFT00000046060 GeneID:480287
KEGG:cfa:480287 Uniprot:J9P748
Length = 1557
Score = 139 (54.0 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 42/133 (31%), Positives = 59/133 (44%)
Query: 98 RCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR-----DEHDN 151
RC +C+ ++LCD CD HTYCV VPEGDWFC +C +
Sbjct: 1150 RCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPECRPKQRSRRLSSRQR 1209
Query: 152 AEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEI-VNFGGSQEVVENSGSERSTVET 210
+E+D E G + V + D E + E EI + SQE E S +R +
Sbjct: 1210 PSLESDEEMEDSMGGEDDEV-DDDDEEGQSEEEEYEIDQDEDDSQEEEEVSPPKRGRPQ- 1267
Query: 211 VSDIVRTGGNQNT 223
V ++T G +T
Sbjct: 1268 VRLPIKTRGRIST 1280
Score = 48 (22.0 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 404 RKSERASNVCKSSKNL-NIKVNASKQAMNTRSSLHDAERQQPGNRSVMSDRRNQNTAMTV 462
RKS A+N ++S N N +V A+K + +RS ++ + S R+ Q+T
Sbjct: 1362 RKS--ANNTPENSPNFPNFRVIATKSSEKSRSLNVTSKLSLQDSESKRRGRKRQST---- 1415
Query: 463 ESSERLQSTYSTG 475
ESS + S+G
Sbjct: 1416 ESSPMTLNRRSSG 1428
Score = 41 (19.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 285 DNATSRNGRMDQSTADNSTELGARTLRR 312
D+ + R GR QST + L R+ R
Sbjct: 1402 DSESKRRGRKRQSTESSPMTLNRRSSGR 1429
Score = 37 (18.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 440 ERQQPGNRSVMSDRRNQNTAMTVESSE 466
+RQ PG + R Q+T T SS+
Sbjct: 1287 QRQDPGR---YTSRSQQSTPKTTVSSK 1310
>DICTYBASE|DDB_G0289719 [details] [associations]
symbol:DDB_G0289719 "SFRS2-interacting protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0289719 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 EMBL:AAFI02000148 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 RefSeq:XP_636078.1
ProteinModelPortal:Q54H40 EnsemblProtists:DDB0188541 GeneID:8627288
KEGG:ddi:DDB_G0289719 eggNOG:KOG4430 InParanoid:Q54H40 OMA:ERESEHA
Uniprot:Q54H40
Length = 1419
Score = 143 (55.4 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 32/75 (42%), Positives = 41/75 (54%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVF 65
S C IC K I C H FCF CI+EW+K + CP+CK RF I+R K
Sbjct: 850 SIDCIICTDTIKKEDISTICGCTHKFCFECILEWSKQTNTCPLCKSRFVRIKRTFKQ--- 906
Query: 66 PRER-FVVVPKRDQI 79
PR++ V+V +DQI
Sbjct: 907 PRKKNSVIVSAKDQI 921
Score = 43 (20.2 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 12/61 (19%), Positives = 28/61 (45%)
Query: 141 DCTVLRDEHDNAEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEIVN--FGGSQEVV 198
+C + ++ ++ E E D E D + V + ++ + + E + +N FG ++
Sbjct: 1165 ECEEVEEDEEDEEDEEDDEDDEDDEQEEDGVYEEAEEDDRDEEELEAHLNVPFGECEDCG 1224
Query: 199 E 199
E
Sbjct: 1225 E 1225
Score = 43 (20.2 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 17/64 (26%), Positives = 25/64 (39%)
Query: 150 DNAEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEIVNFGGSQEVVENSGSERSTVE 209
D+ IE D+ET + + SDS+ N EI +EV E+ E +
Sbjct: 1125 DDGAIELDSETEEDKKHFNRIFQIESDSDTENEN---EIEKEEECEEVEEDEEDEEDEED 1181
Query: 210 TVSD 213
D
Sbjct: 1182 DEDD 1185
Score = 42 (19.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 19/85 (22%), Positives = 30/85 (35%)
Query: 150 DNAEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEIVNFGGSQEVVENSGSERSTVE 209
D+ + + D + D VSE SD V + + + +T
Sbjct: 1005 DDDDDDDDDDYHDDDDDVSESESNLSDFIEETNSLVTPVTRNSSRNPTTTTTTTTTTTTT 1064
Query: 210 TVSDIVRTGG-NQNTVECSGPDCIG 233
T S I R +NT+ S + IG
Sbjct: 1065 TTSPITRRSSLRRNTITISD-ESIG 1088
>DICTYBASE|DDB_G0281183 [details] [associations]
symbol:DDB_G0281183 "RING zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR002483
Pfam:PF01480 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0281183 Prosite:PS00518 GO:GO:0046872
EMBL:AAFI02000040 GO:GO:0008270 GO:GO:0006397 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 eggNOG:NOG244178
RefSeq:XP_640869.1 ProteinModelPortal:Q54UA7
EnsemblProtists:DDB0233761 GeneID:8622925 KEGG:ddi:DDB_G0281183
InParanoid:Q54UA7 OMA:PWIKREL Uniprot:Q54UA7
Length = 548
Score = 133 (51.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 8 SCGICLMD-EGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVFP 66
+C ICL E + +D C H FCFVCI++W+++ +CP+CK + S+ K
Sbjct: 99 TCSICLSPFENLTF---LDICFHQFCFVCILQWSELNQRCPLCKSEYHSLIYQVKSNT-D 154
Query: 67 RERFVVVPKR 76
+RF++ KR
Sbjct: 155 YQRFIIQNKR 164
Score = 43 (20.2 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 412 VCKSSKNLNIKVNASKQAMNTRSSL-HDAERQQPGNRSVMSDRRNQN 457
+C ++ NIK SK + R SL D N + ++ N N
Sbjct: 317 ICFATSPYNIKTYDSKVIYDKRQSLITDMNNLNNNNNNNNNNNNNNN 363
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 174 NSDSEHNNAETVAEIVNFGGSQEVVE 199
N+++ +NN E E N G++E +E
Sbjct: 363 NNNNNNNNNENNNENNNKNGNEESME 388
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 403 LRKSERASNVCKSSKNLNIKVNASKQAMN 431
+ S +N +S N NIK N +K N
Sbjct: 516 INNSNNNNNNINNSNNNNIKKNNNKNNNN 544
>RGD|1305270 [details] [associations]
symbol:Topors "topoisomerase I binding, arginine/serine-rich, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000922 "spindle pole" evidence=IEA;ISO] [GO:0000930
"gamma-tubulin complex" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0003823 "antigen binding" evidence=IEA;ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005814 "centriole"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA;ISO] [GO:0016605 "PML body"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0016925 "protein
sumoylation" evidence=IEA;ISO] [GO:0019789 "SUMO ligase activity"
evidence=IEA;ISO] [GO:0032391 "photoreceptor connecting cilium"
evidence=IEA;ISO] [GO:0034504 "protein localization to nucleus"
evidence=ISO] [GO:0036064 "cilium basal body" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044547 "DNA topoisomerase binding"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0051443
"positive regulation of ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA;ISO] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IEA;ISO] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 RGD:1305270 Prosite:PS00518
GO:GO:0045893 GO:GO:0008630 GO:GO:0043161 GO:GO:0005814
GO:GO:0003823 GO:GO:0046872 GO:GO:0003677 GO:GO:0016607
GO:GO:0016605 GO:GO:0008270 GO:GO:0042127 GO:GO:0016853
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:CH473962
GO:GO:0000922 GO:GO:0000930 GO:GO:0051457 InterPro:IPR017907
GO:GO:0070936 GO:GO:0032391 GO:GO:0051443 GO:GO:0016925
GO:GO:0006513 GO:GO:0036064 GO:GO:0019789 CTD:10210
GeneTree:ENSGT00530000064170 KO:K10631 OrthoDB:EOG47H5PC
IPI:IPI00950361 RefSeq:NP_001102128.1 UniGene:Rn.55605
Ensembl:ENSRNOT00000066081 GeneID:362501 KEGG:rno:362501
UCSC:RGD:1305270 NextBio:680139 Uniprot:D3ZZE0
Length = 1042
Score = 125 (49.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C ICL D ++ +D C H FCF C+ EW+K +++CP+CK+ F SI
Sbjct: 104 CPICL-DRFDNV-SYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSI 149
Score = 58 (25.5 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 464 SSERLQSTYSTGLAQSPGNGKGNIQNQSNVCNFKGA-RLMGKSICGGSSSIPNKQGDSSS 522
S E++++ + QS +G + S+ + G MGKS C + I +K+ + S
Sbjct: 507 SYEKMETVKTQEQEQSYSSGDSDASRASSPRSVLGKDEQMGKSHCDSDTRINSKKEEKRS 566
Query: 523 INLTGPVPGTS 533
+L+ P +S
Sbjct: 567 TSLSTPRDSSS 577
Score = 49 (22.3 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 21/96 (21%), Positives = 41/96 (42%)
Query: 406 SERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAER-QQPGNRSVMSDRRNQNTAMTVES 464
SER + ++ ++ N S+ T S++ D R ++PG + R ++T +
Sbjct: 757 SERKYYYYERHRSRSVSSNRSR----TTSAVPDRMRNEKPGGKRKYKTRHLEDTNEEAQP 812
Query: 465 SERLQSTYSTGLAQSPGNGKGNIQNQSNVCNFKGAR 500
S S Q P G +++S+ +F +R
Sbjct: 813 SRAFASRVKESHYQKPSKLDGGSKDESD--SFSDSR 846
Score = 44 (20.5 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 55/244 (22%), Positives = 98/244 (40%)
Query: 151 NAEIETDTETVFGDGSVSEVV-VQNSDSEHNNAETVAE---IVNF-----GGSQEVVE-N 200
N+ +D E V G G+ S++ VQ +D +N++++ ++ IV F + E+VE +
Sbjct: 441 NSSDSSDEELVSG-GAASQIQGVQANDDVNNDSDSSSDNCVIVGFVKPLAERTPELVELS 499
Query: 201 SGSERSTVETVSDIVRTGGNQNTVECSGPDCIGADT---IINSHEMPPGDAGFALFEIVS 257
S SE + V+T + + D A + ++ E G + ++
Sbjct: 500 SDSEELGSYEKMETVKTQEQEQSYSSGDSDASRASSPRSVLGKDEQM-GKSHCDSDTRIN 558
Query: 258 SIPHPKESLYRFWNSHPVSPRRGIVILDNATSR-NGRMDQSTADNSTELGARTLRRCRDL 316
S K S S RG D A S N R + S++ +++ R D
Sbjct: 559 SKKEEKRST-SLSTPRDSSSTRG----DRACSPYNHRHRKGGRSRSSDSRSQS-RSGHDQ 612
Query: 317 QD-RIQAIRENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQPCPSTSGTGQH 375
++ R ++ ++ S SS P K +KR + S R Q +SG+
Sbjct: 613 RNHRKHHGKKRLKNKRSRSRESSSKP--RARKDKKRSRTRDSSWSRRSQTLSLSSGSTSR 670
Query: 376 LRSQ 379
RS+
Sbjct: 671 SRSR 674
>UNIPROTKB|Q8WUB8 [details] [associations]
symbol:PHF10 "PHD finger protein 10" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0071564
"npBAF complex" evidence=ISS] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0007399
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
GO:GO:0071564 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359 EMBL:AL513547
CTD:55274 eggNOG:NOG279558 HOGENOM:HOG000286026 HOVERGEN:HBG053581
OMA:CETSSQD OrthoDB:EOG4BCDNG EMBL:BC020954 EMBL:BC110323
EMBL:AF338735 EMBL:AK001837 EMBL:CR457273 EMBL:AK222612
IPI:IPI00940864 IPI:IPI00941847 IPI:IPI00964464 RefSeq:NP_060758.2
RefSeq:NP_579866.2 UniGene:Hs.435933 ProteinModelPortal:Q8WUB8
SMR:Q8WUB8 IntAct:Q8WUB8 MINT:MINT-1373208 STRING:Q8WUB8
PhosphoSite:Q8WUB8 DMDM:296439276 PRIDE:Q8WUB8 DNASU:55274
Ensembl:ENST00000339209 Ensembl:ENST00000366780 GeneID:55274
KEGG:hsa:55274 UCSC:uc011egy.2 UCSC:uc011egz.2
GeneCards:GC06M170104 HGNC:HGNC:18250 MIM:613069 neXtProt:NX_Q8WUB8
PharmGKB:PA134972675 InParanoid:Q8WUB8 GenomeRNAi:55274
NextBio:59399 Bgee:Q8WUB8 CleanEx:HS_PHF10 Genevestigator:Q8WUB8
GermOnline:ENSG00000130024 Uniprot:Q8WUB8
Length = 498
Score = 126 (49.4 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C +C +E ++ CD+CD HT+CVG+G A+P G W C DC
Sbjct: 436 CIICGQPHHEEEMMFCDMCDRGYHTFCVGLG-AIPSGRWIC-DC 477
Score = 48 (22.0 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVC 35
CGICL + + +G+ +S H C C
Sbjct: 380 CGICLKGKESNKKGKAESLIH--CSQC 404
>SGD|S000006297 [details] [associations]
symbol:ASR1 "Ubiquitin ligase that modifies and regulates RNA
Pol II" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0045471 "response to ethanol" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA;IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 SGD:S000006297
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0045471
GO:GO:0046872 GO:GO:0008270 EMBL:BK006949 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 GO:GO:0004842 EMBL:U51033
PIR:S69076 RefSeq:NP_015418.2 ProteinModelPortal:Q06834 SMR:Q06834
DIP:DIP-6628N IntAct:Q06834 MINT:MINT-389129 STRING:Q06834
EnsemblFungi:YPR093C GeneID:856208 KEGG:sce:YPR093C CYGD:YPR093c
eggNOG:NOG256492 HOGENOM:HOG000034109 OMA:PCGHEYH OrthoDB:EOG4WQ4BN
NextBio:981414 Genevestigator:Q06834 GermOnline:YPR093C
Uniprot:Q06834
Length = 288
Score = 95 (38.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 9 CGICLMD--EGKSIRGQIDSCDHYFCFVCIMEWAK--IESKCPMCKRRFTSI 56
C ICL D EG+ G ++ C H F CI EW K I KCP+C+ T +
Sbjct: 4 CPICLADDQEGEQF-GCLNVCGHKFHLNCIREWHKYSINLKCPICRVESTHL 54
Score = 73 (30.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 18/55 (32%), Positives = 24/55 (43%)
Query: 92 DPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGD---WF-CHDC 142
D ++C++C T L L C C+ H C+ G A GD W C DC
Sbjct: 114 DTIKIIQCSICGDTDVSRLSLYCQDCEAIYHETCL-RGLACEVGDRNTWQECTDC 167
>RGD|2319802 [details] [associations]
symbol:LOC100365068 "rCG50794-like" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:2319802 Prosite:PS00518 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0000245 GeneTree:ENSGT00530000063661
OrthoDB:EOG4G7BXK IPI:IPI00959123 Ensembl:ENSRNOT00000007003
ArrayExpress:D4ABH1 Uniprot:D4ABH1
Length = 1407
Score = 110 (43.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 9 CGICLMDE-GKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C ICL GK + G +SC+H FC CI++WA+I + CP+ ++ F ++
Sbjct: 41 CPICLSCLLGKEV-GFPESCNHVFCMACILKWAEILASCPIDRKPFQAV 88
Score = 65 (27.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 58/306 (18%), Positives = 119/306 (38%)
Query: 139 CHDCTVLRDEHDNAEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEIVNFGGSQEVV 198
C D T+L+ DN +++ E D V + +++ H E + + ++ V
Sbjct: 653 CED-TLLKHNLDNTQLDNSLEEKT-DSLVEHPI--HAELPHKEVEQSEKHFSEDNNETVP 708
Query: 199 EN-----SGSERSTVETVSDIVRTGGNQNTVECSGPDCIGADTIINSHEMPPGDAGFALF 253
S S VE+ ++ ++N+V S + + +D ++ + E A
Sbjct: 709 MECDSFCSDQNESEVESSANTDPKQLSENSVTHSSDNKLSSDPVVENVETVAQPAE---- 764
Query: 254 EIVSSIPHPKESLYRFWN-SHPVSPRRGIVILDNATSRNGRMDQSTADNSTELGARTLRR 312
+V P P+ RF + S SP + +A R + T + +++ +
Sbjct: 765 SLVDKAPKPRTRRSRFHSPSTTWSPNK------DAAQEKRRAQSPSPKRETAVESKSSQS 818
Query: 313 CRDLQDRIQAIRENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQPCPSTSGT 372
++ + R++ S + ++ KR N E + SG P TS
Sbjct: 819 PSPKRESARGRRKSRSLSPKKDVSRE----RRQSRSPKRENAREAKRSESGSPRRDTSRE 874
Query: 373 GQHLRSQ--DGSSCD-SHDVGKAWKMMKTAKSMLRKSERASNVCKSSKNLNIKVNASKQA 429
Q +S+ D SS + S + + + A+ R ER + + S++ + + S+
Sbjct: 875 NQRSQSRVKDSSSREKSRSRSRERESDRDAQRRDRDRERRAR--RWSRSRSRSRSPSRSR 932
Query: 430 MNTRSS 435
++SS
Sbjct: 933 TKSKSS 938
Score = 59 (25.8 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 397 KTAKSMLRKSERASNVCKSSKNLNIKVNASKQAMNTRS----SLHDAERQQPGNRSVMSD 452
K+++S K E A KS ++L+ K + S++ +RS + +A+R + G+ +
Sbjct: 814 KSSQSPSPKRESARGRRKS-RSLSPKKDVSRERRQSRSPKRENAREAKRSESGSPRRDTS 872
Query: 453 RRNQNTAMTV-ESSERLQS 470
R NQ + V +SS R +S
Sbjct: 873 RENQRSQSRVKDSSSREKS 891
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 33/132 (25%), Positives = 56/132 (42%)
Query: 491 SNVCNFKGARLMGKSICGGSSSIPNKQGDSSSINLTGPVPGTSYSHIGEHDVLPSSSKIV 550
S N+ ++ GK + G P+ S+++N T +P S + V SS
Sbjct: 1252 SQQVNYIASQPDGKQVQG----FPSASHVSNNMN-TQVLPAPSAAPANTGSVQGPSSGNT 1306
Query: 551 DPEGKVLAESKARKY-DHAKCEIQSL----VKLNLKCLSRDKRLEYDAFKKVAKLATHTI 605
V A + A K + K +IQ VKL +K ++K + + +K++ + A +
Sbjct: 1307 SSSSHVQAANAAVKLAESKKLQIQEKAAQEVKLAIKPFYQNKDITKEEYKEIVRKAVDKV 1366
Query: 606 LASCGLEHPKSG 617
C H KSG
Sbjct: 1367 ---C---HSKSG 1372
>UNIPROTKB|F1PR25 [details] [associations]
symbol:PHF10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
GeneTree:ENSGT00530000063194 OMA:CETSSQD EMBL:AAEX03008651
EMBL:AAEX03008652 EMBL:AAEX03008653 EMBL:AAEX03008654
EMBL:AAEX03008655 EMBL:AAEX03008656 EMBL:AAEX03008657
Ensembl:ENSCAFT00000006531 Uniprot:F1PR25
Length = 497
Score = 125 (49.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C +C +E ++ CD+CD HT+CVG+G A+P G W C DC
Sbjct: 435 CIICGQPHHEEEMMFCDVCDRGYHTFCVGLG-AIPSGRWIC-DC 476
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVC 35
CGICL + + +G+ +S H C C
Sbjct: 379 CGICLKGKESNKKGKAESLIH--CSQC 403
>MGI|MGI:1919307 [details] [associations]
symbol:Phf10 "PHD finger protein 10" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IDA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
MGI:MGI:1919307 GO:GO:0007399 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0071564 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 CTD:55274 eggNOG:NOG279558 HOGENOM:HOG000286026
HOVERGEN:HBG053581 OrthoDB:EOG4BCDNG EMBL:AK007873 EMBL:AC154411
EMBL:AC182749 EMBL:BC002206 IPI:IPI00318829 IPI:IPI00556703
RefSeq:NP_077212.3 UniGene:Mm.440085 ProteinModelPortal:Q9D8M7
SMR:Q9D8M7 STRING:Q9D8M7 PhosphoSite:Q9D8M7 PRIDE:Q9D8M7
GeneID:72057 KEGG:mmu:72057 UCSC:uc008anj.2 UCSC:uc008ank.2
InParanoid:Q9D8M7 NextBio:335336 Bgee:Q9D8M7 CleanEx:MM_PHF10
Genevestigator:Q9D8M7 GermOnline:ENSMUSG00000023883 Uniprot:Q9D8M7
Length = 497
Score = 125 (49.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C +C +E ++ CD+CD HT+CVG+G A+P G W C DC
Sbjct: 435 CIICGQPHHEEEMMFCDVCDRGYHTFCVGLG-AIPSGRWIC-DC 476
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVC 35
CGICL + + +G+ +S H C C
Sbjct: 379 CGICLKGKESNKKGKAESLIH--CSQC 403
>RGD|1305266 [details] [associations]
symbol:Phf10 "PHD finger protein 10" species:10116 "Rattus
norvegicus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=ISS]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1305266 GO:GO:0007399 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0071564 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GeneTree:ENSGT00530000063194 CTD:55274
eggNOG:NOG279558 HOGENOM:HOG000286026 HOVERGEN:HBG053581
OrthoDB:EOG4BCDNG EMBL:BC098049 IPI:IPI00363808
RefSeq:NP_001019918.1 UniGene:Rn.204821 STRING:Q4V7A6
Ensembl:ENSRNOT00000020865 GeneID:292404 KEGG:rno:292404
UCSC:RGD:1305266 InParanoid:Q4V7A6 NextBio:634075
Genevestigator:Q4V7A6 Uniprot:Q4V7A6
Length = 497
Score = 125 (49.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C +C +E ++ CD+CD HT+CVG+G A+P G W C DC
Sbjct: 435 CIICGQPHHEEEMMFCDVCDRGYHTFCVGLG-AIPSGRWIC-DC 476
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVC 35
CGICL + + +G+ +S H C C
Sbjct: 379 CGICLKGKESNKKGKAESLIH--CSQC 403
>RGD|1598325 [details] [associations]
symbol:Scaf11 "SR-related CTD-associated factor 11"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1598325 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 IPI:IPI00392552 Ensembl:ENSRNOT00000034989
UCSC:RGD:1598325 ArrayExpress:F1M4Q2 Uniprot:F1M4Q2
Length = 1392
Score = 110 (43.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 9 CGICLMDE-GKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C ICL GK + G +SC+H FC CI++WA+I + CP+ ++ F ++
Sbjct: 48 CPICLSCLLGKEV-GFPESCNHVFCMACILKWAEILASCPIDRKPFQAV 95
Score = 65 (27.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 58/306 (18%), Positives = 119/306 (38%)
Query: 139 CHDCTVLRDEHDNAEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEIVNFGGSQEVV 198
C D T+L+ DN +++ E D V + +++ H E + + ++ V
Sbjct: 660 CED-TLLKHNLDNTQLDNSLEEKT-DSLVEHPI--HAELPHKEVEQSEKHFSEDNNETVP 715
Query: 199 EN-----SGSERSTVETVSDIVRTGGNQNTVECSGPDCIGADTIINSHEMPPGDAGFALF 253
S S VE+ ++ ++N+V S + + +D ++ + E A
Sbjct: 716 MECDSFCSDQNESEVESSANTDPKQLSENSVTHSSDNKLSSDPVVENVETVAQPAE---- 771
Query: 254 EIVSSIPHPKESLYRFWN-SHPVSPRRGIVILDNATSRNGRMDQSTADNSTELGARTLRR 312
+V P P+ RF + S SP + +A R + T + +++ +
Sbjct: 772 SLVDKAPKPRTRRSRFHSPSTTWSPNK------DAAQEKRRAQSPSPKRETAVESKSSQS 825
Query: 313 CRDLQDRIQAIRENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQPCPSTSGT 372
++ + R++ S + ++ KR N E + SG P TS
Sbjct: 826 PSPKRESARGRRKSRSLSPKKDVSRE----RRQSRSPKRENAREAKRSESGSPRRDTSRE 881
Query: 373 GQHLRSQ--DGSSCD-SHDVGKAWKMMKTAKSMLRKSERASNVCKSSKNLNIKVNASKQA 429
Q +S+ D SS + S + + + A+ R ER + + S++ + + S+
Sbjct: 882 NQRSQSRVKDSSSREKSRSRSRERESDRDAQRRDRDRERRAR--RWSRSRSRSRSPSRSR 939
Query: 430 MNTRSS 435
++SS
Sbjct: 940 TKSKSS 945
Score = 59 (25.8 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 397 KTAKSMLRKSERASNVCKSSKNLNIKVNASKQAMNTRS----SLHDAERQQPGNRSVMSD 452
K+++S K E A KS ++L+ K + S++ +RS + +A+R + G+ +
Sbjct: 821 KSSQSPSPKRESARGRRKS-RSLSPKKDVSRERRQSRSPKRENAREAKRSESGSPRRDTS 879
Query: 453 RRNQNTAMTV-ESSERLQS 470
R NQ + V +SS R +S
Sbjct: 880 RENQRSQSRVKDSSSREKS 898
Score = 54 (24.1 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 32/128 (25%), Positives = 55/128 (42%)
Query: 495 NFKGARLMGKSICGGSSSIPNKQGDSSSINLTGPVPGTSYSHIGEHDVLPSSSKIVDPEG 554
N+ ++ GK + G P+ S+++N T +P S + V SS
Sbjct: 1237 NYIASQPDGKQVQG----FPSASHVSNNMN-TQVLPAPSAAPANTGSVQGPSSGNTSSSS 1291
Query: 555 KVLAESKARKY-DHAKCEIQSL----VKLNLKCLSRDKRLEYDAFKKVAKLATHTILASC 609
V A + A K + K +IQ VKL +K ++K + + +K++ + A + C
Sbjct: 1292 HVQAANAAVKLAESKKLQIQEKAAQEVKLAIKPFYQNKDITKEEYKEIVRKAVDKV---C 1348
Query: 610 GLEHPKSG 617
H KSG
Sbjct: 1349 ---HSKSG 1353
>TAIR|locus:2089606 [details] [associations]
symbol:AT3G14740 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
SMART:SM00249 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AB023038 KO:K11380
EMBL:AB493614 IPI:IPI00516474 RefSeq:NP_974313.1 UniGene:At.39180
ProteinModelPortal:Q9LUC1 SMR:Q9LUC1 STRING:Q9LUC1
EnsemblPlants:AT3G14740.2 GeneID:820702 KEGG:ath:AT3G14740
TAIR:At3g14740 HOGENOM:HOG000090334 InParanoid:Q9LUC1 OMA:CVIECSE
PhylomeDB:Q9LUC1 ProtClustDB:CLSN2688382 Genevestigator:Q9LUC1
Uniprot:Q9LUC1
Length = 343
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 87 SSRTADPYAYVRCNVCQGTTYESL--LLLCDLCDTASHTYCVG--MGNAVPEGDWFCHDC 142
S R + + C VCQ T + L ++ CD CD H C G + A+PEGDWFC C
Sbjct: 141 SDREVEDEDGIMCAVCQSTDGDPLNPIVFCDGCDLMVHASCYGNPLVKAIPEGDWFCRQC 200
>UNIPROTKB|Q9NS56 [details] [associations]
symbol:TOPORS "E3 ubiquitin-protein ligase Topors"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IDA] [GO:0044547 "DNA topoisomerase binding" evidence=IPI]
[GO:0006351 "transcription, DNA-dependent" evidence=NAS]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003823 "antigen
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051457 "maintenance of protein location in nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IMP;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0019789 "SUMO ligase activity" evidence=IMP;IDA]
[GO:0016925 "protein sumoylation" evidence=IMP;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IDA] [GO:0016605 "PML body" evidence=IDA]
[GO:0034504 "protein localization to nucleus" evidence=IMP]
[GO:0051443 "positive regulation of ubiquitin-protein ligase
activity" evidence=IDA] [GO:0070936 "protein K48-linked
ubiquitination" evidence=IDA] [GO:0006513 "protein
monoubiquitination" evidence=IDA] [GO:0032391 "photoreceptor
connecting cilium" evidence=IDA] [GO:0005868 "cytoplasmic dynein
complex" evidence=TAS] [GO:0036064 "cilium basal body"
evidence=IDA] [GO:0030496 "midbody" evidence=TAS] [GO:0010842
"retina layer formation" evidence=ISS] [GO:0035845 "photoreceptor
cell outer segment organization" evidence=ISS] [GO:0046548 "retinal
rod cell development" evidence=ISS] [GO:0046549 "retinal cone cell
development" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0000922 "spindle pole"
evidence=IDA] [GO:0000930 "gamma-tubulin complex" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0045893
GO:GO:0043066 GO:GO:0008630 GO:GO:0043161 GO:GO:0005814
GO:GO:0003823 GO:GO:0046872 GO:GO:0003677 GO:GO:0016607
GO:GO:0016605 GO:GO:0008270 GO:GO:0006351 Orphanet:791
GO:GO:0042127 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0035845
GO:GO:0010842 GO:GO:0004842 GO:GO:0030496 GO:GO:0000922
GO:GO:0046548 GO:GO:0000930 GO:GO:0051457 InterPro:IPR017907
GO:GO:0070936 GO:GO:0032391 GO:GO:0051443 GO:GO:0016925
GO:GO:0006513 GO:GO:0046549 GO:GO:0036064 GO:GO:0019789
EMBL:AL353671 CTD:10210 eggNOG:NOG244178 KO:K10631 ChiTaRS:TOPORS
EMBL:AF098300 EMBL:AB045732 EMBL:AB045733 EMBL:BC060884 EMBL:U82939
IPI:IPI00396077 IPI:IPI00643426 RefSeq:NP_001182551.1
RefSeq:NP_005793.2 UniGene:Hs.589962 ProteinModelPortal:Q9NS56
SMR:Q9NS56 IntAct:Q9NS56 MINT:MINT-94004 STRING:Q9NS56
PhosphoSite:Q9NS56 DMDM:74752935 PaxDb:Q9NS56 PRIDE:Q9NS56
Ensembl:ENST00000360538 Ensembl:ENST00000379858 GeneID:10210
KEGG:hsa:10210 UCSC:uc003zrb.3 UCSC:uc003zrc.3
GeneCards:GC09M032496 HGNC:HGNC:21653 MIM:609507 MIM:609923
neXtProt:NX_Q9NS56 PharmGKB:PA134979531 HOGENOM:HOG000231723
HOVERGEN:HBG080410 InParanoid:Q9NS56 OMA:DIINFRR OrthoDB:EOG47H5PC
PhylomeDB:Q9NS56 GenomeRNAi:10210 NextBio:38656 Bgee:Q9NS56
CleanEx:HS_TOPORS Genevestigator:Q9NS56 GermOnline:ENSG00000197579
Uniprot:Q9NS56
Length = 1045
Score = 125 (49.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C ICL D ++ +D C H FCF C+ EW+K +++CP+CK+ F SI
Sbjct: 103 CPICL-DRFDNV-SYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSI 148
Score = 53 (23.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 31/127 (24%), Positives = 52/127 (40%)
Query: 332 NNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQPCPSTSGTGQ-HLRSQDGSSCDSHDVG 390
N+S+R + +HRKR S S RS S SG Q + R G
Sbjct: 575 NSSVRGDRVYSPYNHRHRKRGR-SRSSDSRS----QSRSGHDQKNHRKHHGKKRMKSKRS 629
Query: 391 KAWKMMKTA--KSMLRKSERASNVCKSSKNLNIKVNASKQAMNTRSSLHDAERQQPGNRS 448
++ + + + R R S+ + S+ L++ ++ ++ +RSS H R + NR
Sbjct: 630 RSRESSRPRGRRDKKRSRTRDSSWSRRSQTLSLSSESTSRS-RSRSSDHGKRRSRSRNRD 688
Query: 449 VMSDRRN 455
R N
Sbjct: 689 RYYLRNN 695
Score = 51 (23.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 25/85 (29%), Positives = 39/85 (45%)
Query: 380 DGSSCDS-HDV-GKAWKMMK-----TAKSMLRKSERASNVCKSSKNLNIKVNASKQAMNT 432
D S C S H V GK ++ K + + +K E+ S S +NLN V +
Sbjct: 528 DVSRCSSPHSVLGKDEQINKGHCDSSTRIKSKKEEKRSTSLSSPRNLNSSVRGDR----V 583
Query: 433 RSSLHDAERQQPGNRSVMSDRRNQN 457
S + R++ +RS SD R+Q+
Sbjct: 584 YSPYNHRHRKRGRSRS--SDSRSQS 606
Score = 48 (22.0 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 394 KMMKTAKSMLRKSERASNVCKSS-KNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVMSD 452
K ++ S R R+ + K+ K+ K SK++ + SS R + +R+ S
Sbjct: 593 KRGRSRSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSS 652
Query: 453 --RRNQNTAMTVESSERLQSTYS 473
RR+Q +++ ES+ R +S S
Sbjct: 653 WSRRSQTLSLSSESTSRSRSRSS 675
>RGD|1561238 [details] [associations]
symbol:RGD1561238 "similar to ring finger protein 122 homolog"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1561238 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
IPI:IPI00394572 Ensembl:ENSRNOT00000031701 Uniprot:F1LZF5
Length = 95
Score = 100 (40.3 bits), Expect = 0.00030, P = 0.00030
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 4 LHSRSCGICLMD-EGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKR 51
L+ ++C +CL D +GK G + C H F C+++W ++ CPMC +
Sbjct: 28 LYGQTCAVCLEDFKGKDELGVLP-CQHAFHRKCLVKWLEVRCVCPMCNK 75
>UNIPROTKB|F1SC16 [details] [associations]
symbol:LOC100511482 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
GeneTree:ENSGT00530000063194 EMBL:CU633311
Ensembl:ENSSSCT00000004429 Uniprot:F1SC16
Length = 470
Score = 122 (48.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C VC +E ++ CD+CD HT+CVG+G A P G W C DC
Sbjct: 408 CAVCGQPHHEEEMMCCDVCDRGHHTFCVGLG-APPSGRWIC-DC 449
Score = 46 (21.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVC 35
CGICL + + RG+ + H C C
Sbjct: 352 CGICLRGKESNKRGKAEPLVH--CSQC 376
>MGI|MGI:2146189 [details] [associations]
symbol:Topors "topoisomerase I binding,
arginine/serine-rich" species:10090 "Mus musculus" [GO:0000922
"spindle pole" evidence=ISO] [GO:0000930 "gamma-tubulin complex"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003823
"antigen binding" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005814
"centriole" evidence=ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006513 "protein
monoubiquitination" evidence=ISO] [GO:0006915 "apoptotic process"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=ISO] [GO:0016605 "PML body" evidence=ISO]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0016853 "isomerase
activity" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016925 "protein sumoylation" evidence=ISO] [GO:0019789 "SUMO
ligase activity" evidence=ISO] [GO:0032391 "photoreceptor
connecting cilium" evidence=ISO;IDA] [GO:0034504 "protein
localization to nucleus" evidence=ISO] [GO:0036064 "cilium basal
body" evidence=ISO;IDA] [GO:0042127 "regulation of cell
proliferation" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044547 "DNA topoisomerase binding" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051443 "positive
regulation of ubiquitin-protein ligase activity" evidence=ISO]
[GO:0051457 "maintenance of protein location in nucleus"
evidence=ISO] [GO:0070936 "protein K48-linked ubiquitination"
evidence=ISO] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
MGI:MGI:2146189 Prosite:PS00518 GO:GO:0045893 GO:GO:0008630
GO:GO:0043161 GO:GO:0005814 GO:GO:0003823 GO:GO:0046872
GO:GO:0003677 GO:GO:0016607 GO:GO:0016605 GO:GO:0008270
GO:GO:0042127 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000922 GO:GO:0000930 GO:GO:0051457 InterPro:IPR017907
GO:GO:0070936 GO:GO:0032391 GO:GO:0051443 GO:GO:0034504
GO:GO:0016925 GO:GO:0006513 GO:GO:0036064 GO:GO:0019789 CTD:10210
eggNOG:NOG244178 GeneTree:ENSGT00530000064170 KO:K10631
HOVERGEN:HBG080410 OMA:DIINFRR OrthoDB:EOG47H5PC EMBL:AB072395
EMBL:AB104865 EMBL:BC037141 EMBL:BC040797 EMBL:AK044564
EMBL:AK134075 EMBL:AK140250 EMBL:AK143025 EMBL:AK153743
IPI:IPI00330897 RefSeq:NP_598858.2 UniGene:Mm.251548
ProteinModelPortal:Q80Z37 SMR:Q80Z37 MINT:MINT-1789728
STRING:Q80Z37 PhosphoSite:Q80Z37 PRIDE:Q80Z37
Ensembl:ENSMUST00000042575 GeneID:106021 KEGG:mmu:106021
InParanoid:Q80Z37 NextBio:358016 Bgee:Q80Z37 CleanEx:MM_TOPORS
Genevestigator:Q80Z37 GermOnline:ENSMUSG00000036822 Uniprot:Q80Z37
Length = 1033
Score = 125 (49.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C ICL D ++ +D C H FCF C+ EW+K +++CP+CK+ F SI
Sbjct: 104 CPICL-DRFDNV-SYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSI 149
Score = 51 (23.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 57/250 (22%), Positives = 105/250 (42%)
Query: 151 NAEIETDTETVFGDGSVSEVV-VQNSDSEHNNAETVAE---IVNF-----GGSQEVVE-N 200
N+ +D E V G G+ S++ VQ +D +N++++ ++ IV F + E+VE +
Sbjct: 441 NSSDSSDEELVSG-GTTSQIQGVQTNDDVNNDSDSSSDNCVIVGFVKPLAERTPELVELS 499
Query: 201 SGSER----STVETVSDIVR----TGGNQNTVECSGP-DCIGADTIIN-SH-EMPPGDAG 249
S SE VETV + + G+ + S P +G D ++ SH + +
Sbjct: 500 SDSEELGPYEKVETVKTQEQEQSYSSGDSDVSRASSPRSVLGKDEQMSKSHCDSDTRISS 559
Query: 250 FALFEIVSSIPHPKESLYRFWNSHPVSPRRGIVILDNATSRNGRMDQSTADNSTELGART 309
+ +S+P P++S S RG + R+ + +S + +S
Sbjct: 560 KKEEKRSTSLPAPRDS----------SSTRGDRVCSPYNHRHRKGGRSRSSDSRSQS--- 606
Query: 310 LRRCRDLQDRIQAIRENWSALQNNSLRFSSIPVESGTKHRKRHNVSEVSQERSGQPCPST 369
R D ++ + ++ ++ S SS P K +KR + S R Q +
Sbjct: 607 -RSGHDPRNHRKHGKKRLRNKRSRSRESSSRP--RARKDKKRSRTRDSSWSRRSQTLSLS 663
Query: 370 SGTGQHLRSQ 379
SG+ RS+
Sbjct: 664 SGSTSRSRSR 673
Score = 48 (22.0 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 377 RSQDGSSCDSHDVGKAWKMMKTAKSMLRKSERASNV-CKSSKNLNIK--------VNASK 427
+ Q SS DS DV +A + +S+L K E+ S C S ++ K + A +
Sbjct: 519 QEQSYSSGDS-DVSRA----SSPRSVLGKDEQMSKSHCDSDTRISSKKEEKRSTSLPAPR 573
Query: 428 QAMNTRSSLHDA---ERQQPGNRSVMSDRRNQN 457
+ +TR + R + G RS SD R+Q+
Sbjct: 574 DSSSTRGDRVCSPYNHRHRKGGRSRSSDSRSQS 606
Score = 47 (21.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 34/172 (19%), Positives = 69/172 (40%)
Query: 301 NSTELGARTLR----RCRDLQDRIQAIRENWSALQNNSL---RFSSIPVESGTKHRKRHN 353
N + G + LR R R+ R +A ++ + +S R ++ + SG+ R R
Sbjct: 614 NHRKHGKKRLRNKRSRSRESSSRPRARKDKKRSRTRDSSWSRRSQTLSLSSGSTSRSRSR 673
Query: 354 VSEVSQERSGQPCPSTSGTGQHLRSQDGSSCDSHDVGKAWKMMKTA--KSMLRKSERASN 411
S+ + RS S + +LR+ GS + + S R++ ++
Sbjct: 674 SSDHGKRRSR----SRNRDRYYLRNNYGSKYKWEYTYYSRNKDRDGYESSYRRRTLSRAH 729
Query: 412 VCKSSKNLNIKVNASKQAMNTRSSLHDAER----QQPGNRSVMSDRRNQNTA 459
+ S + ++ + + N R H + ++ +RSV S+R +A
Sbjct: 730 YSRQSSSPEFRIQSFSERTNARKKNHSERKYYYYERRRSRSVSSNRSRTTSA 781
>UNIPROTKB|F1SC00 [details] [associations]
symbol:LOC100511482 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
GeneTree:ENSGT00530000063194 OMA:CETSSQD EMBL:CU582832
Ensembl:ENSSSCT00000004435 Uniprot:F1SC00
Length = 498
Score = 122 (48.0 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C VC +E ++ CD+CD HT+CVG+G A P G W C DC
Sbjct: 436 CAVCGQPHHEEEMMCCDVCDRGHHTFCVGLG-APPSGRWIC-DC 477
Score = 46 (21.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVC 35
CGICL + + RG+ + H C C
Sbjct: 380 CGICLRGKESNKRGKAEPLVH--CSQC 404
>RGD|1306199 [details] [associations]
symbol:Baz1a "bromodomain adjacent to zinc finger domain, 1A"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=ISO] [GO:0006261 "DNA-dependent DNA replication"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008623 "CHRAC" evidence=ISO] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00297
RGD:1306199 GO:GO:0046872 GO:GO:0008270 GO:GO:0006261
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000228 GO:GO:0008623 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF02791 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 IPI:IPI00959691
Ensembl:ENSRNOT00000009080 Uniprot:F1M4U9
Length = 1516
Score = 132 (51.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 31/97 (31%), Positives = 43/97 (44%)
Query: 98 RCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR-----DEHDN 151
RC +C+ ++LCD CD HTYCV VP+GDWFC +C +
Sbjct: 1110 RCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPDGDWFCPECRPKQRSRRLSSRQR 1169
Query: 152 AEIETDTETVFG-DGSVSEVVVQNSDSEHNNAETVAE 187
+E+D E G +G EV + D + E E
Sbjct: 1170 PSLESDEEMEEGMEGDDGEVDDDDEDGQSEEEEYEVE 1206
Score = 47 (21.6 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 274 PVSPRRGIVILDNATSRNGRMDQSTADNSTELGARTLRR 312
P++ + + D+ + R GR QST + L R+ R
Sbjct: 1350 PLNSAERLSLQDSESKRRGRKRQSTESSPVPLNRRSSGR 1388
>UNIPROTKB|F8W6K1 [details] [associations]
symbol:SCAF11 "Protein SCAF11" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AC000015 HGNC:HGNC:10784 ChiTaRS:SCAF11
EMBL:AC084878 IPI:IPI00852713 ProteinModelPortal:F8W6K1 SMR:F8W6K1
Ensembl:ENST00000266589 ArrayExpress:F8W6K1 Bgee:F8W6K1
Uniprot:F8W6K1
Length = 118
Score = 99 (39.9 bits), Expect = 0.00038, P = 0.00038
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C CL++ K + G +SC+H FC CI++WA+ + CP+ ++ F ++
Sbjct: 60 CLNCLLE--KEV-GFPESCNHVFCMTCILKWAETLASCPIDRKPFQAV 104
>UNIPROTKB|F1MG25 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:DAAA02004468
EMBL:DAAA02004469 EMBL:DAAA02004470 IPI:IPI00906306
Ensembl:ENSBTAT00000027534 Uniprot:F1MG25
Length = 1456
Score = 128 (50.1 bits), Expect = 0.00039, P = 0.00039
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
V C +C+ E LLLLCD CD HTYC +P+GDWFC C
Sbjct: 1221 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPAC 1267
>UNIPROTKB|F1PHI0 [details] [associations]
symbol:TOPORS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0036064 "cilium basal body" evidence=IDA]
[GO:0016607 "nuclear speck" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 GO:GO:0036064 CTD:10210
GeneTree:ENSGT00530000064170 KO:K10631 OMA:DIINFRR
EMBL:AAEX03007933 EMBL:AAEX03007934 RefSeq:XP_003639434.1
Ensembl:ENSCAFT00000002842 GeneID:481577 KEGG:cfa:481577
Uniprot:F1PHI0
Length = 1043
Score = 125 (49.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C ICL D ++ +D C H FCF C+ EW+K +++CP+CK+ F SI
Sbjct: 103 CPICL-DRFDNV-SYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSI 148
Score = 50 (22.7 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 397 KTAKSMLRKSERASNVCKSS-KNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVMSD--R 453
++ S R R+ + KS K+ K SK++ + SS R + +R+ S R
Sbjct: 595 RSRSSDSRSQSRSGHDQKSRRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSR 654
Query: 454 RNQNTAMTVESSERLQSTYS 473
R+Q +++ ES+ R +S S
Sbjct: 655 RSQTLSLSSESTSRSRSRSS 674
Score = 48 (22.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 464 SSERLQSTYSTGLAQSPGNGKGNIQNQSNVCNFKGA-RLMGKSICGGSSSIPNKQGDSSS 522
S E+++ T T QS +G ++ S+ + G + K CG I +K+ + S
Sbjct: 507 SYEKME-TVKTQ-EQSYSSGDSDVSRCSSPHSVLGKDEQINKGHCGSGKRIKSKKEEKHS 564
Query: 523 INLTGP 528
+L+ P
Sbjct: 565 TSLSSP 570
>ZFIN|ZDB-GENE-041024-2 [details] [associations]
symbol:dpf2 "D4, zinc and double PHD fingers family
2" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00028 PROSITE:PS50016
PROSITE:PS50157 SMART:SM00184 SMART:SM00249 SMART:SM00355
ZFIN:ZDB-GENE-041024-2 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 HOVERGEN:HBG004475 InterPro:IPR025750 Pfam:PF14051
CTD:5977 KO:K13196 EMBL:BC083281 IPI:IPI00483161
RefSeq:NP_001007153.1 UniGene:Dr.37136 ProteinModelPortal:Q5XJL8
PRIDE:Q5XJL8 GeneID:474324 KEGG:dre:474324 InParanoid:Q5XJL8
NextBio:20850390 ArrayExpress:Q5XJL8 Bgee:Q5XJL8 Uniprot:Q5XJL8
Length = 400
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVP-EGDWFCHDCTVLRDE 148
CN+C + + LL CD CD H YC+ +VP EG W CH C L E
Sbjct: 337 CNICGTSENDDQLLFCDDCDRGYHMYCLSPPMSVPPEGSWSCHLCLALLKE 387
>UNIPROTKB|I3LN35 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01429 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:CU915672
Ensembl:ENSSSCT00000024565 Uniprot:I3LN35
Length = 1929
Score = 128 (50.1 bits), Expect = 0.00053, P = 0.00053
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
V C +C+ E LLLLCD CD HTYC +P+GDWFC C
Sbjct: 1876 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPAC 1922
>UNIPROTKB|F1NRS9 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 SMART:SM00391 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:AADN02017093
EMBL:AADN02017094 EMBL:AADN02017095 EMBL:AADN02017096
IPI:IPI00821034 Ensembl:ENSGALT00000037696 ArrayExpress:F1NRS9
Uniprot:F1NRS9
Length = 1981
Score = 128 (50.1 bits), Expect = 0.00054, P = 0.00054
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
V C +C+ E LLLLCD CD HTYC +P+GDWFC C
Sbjct: 1747 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPAC 1793
>UNIPROTKB|F1RPS1 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01429 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00391 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 OMA:DSDDQAD
EMBL:CU915672 Ensembl:ENSSSCT00000017294 Uniprot:F1RPS1
Length = 1988
Score = 128 (50.1 bits), Expect = 0.00055, P = 0.00055
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
V C +C+ E LLLLCD CD HTYC +P+GDWFC C
Sbjct: 1935 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPAC 1981
>UNIPROTKB|F1MCP3 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 SUPFAM:SSF54171
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 EMBL:DAAA02004468
EMBL:DAAA02004469 EMBL:DAAA02004470 IPI:IPI00733463
Ensembl:ENSBTAT00000046021 Uniprot:F1MCP3
Length = 2110
Score = 128 (50.1 bits), Expect = 0.00058, P = 0.00058
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
V C +C+ E LLLLCD CD HTYC +P+GDWFC C
Sbjct: 1875 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPAC 1921
>UNIPROTKB|F1P2F7 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 IPI:IPI00572336
EMBL:AADN02017093 EMBL:AADN02017094 EMBL:AADN02017095
EMBL:AADN02017096 Ensembl:ENSGALT00000020542 ArrayExpress:F1P2F7
Uniprot:F1P2F7
Length = 2125
Score = 128 (50.1 bits), Expect = 0.00059, P = 0.00059
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
V C +C+ E LLLLCD CD HTYC +P+GDWFC C
Sbjct: 1891 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPAC 1937
>UNIPROTKB|E1C3I8 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001965 InterPro:IPR016177 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01429 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982 SMART:SM00249
SMART:SM00297 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 OMA:DSDDQAD
EMBL:AADN02017093 EMBL:AADN02017094 EMBL:AADN02017095
EMBL:AADN02017096 IPI:IPI00821728 Ensembl:ENSGALT00000037699
ArrayExpress:E1C3I8 Uniprot:E1C3I8
Length = 2126
Score = 128 (50.1 bits), Expect = 0.00059, P = 0.00059
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
V C +C+ E LLLLCD CD HTYC +P+GDWFC C
Sbjct: 1892 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPAC 1938
>UNIPROTKB|Q9DE13 [details] [associations]
symbol:BAZ2B "Bromodomain adjacent to zinc finger domain
protein 2B" species:9031 "Gallus gallus" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
Gene3D:3.30.890.10 EMBL:AF224275 IPI:IPI00572336 RefSeq:NP_990008.1
UniGene:Gga.9252 ProteinModelPortal:Q9DE13 SMR:Q9DE13 PRIDE:Q9DE13
GeneID:395400 KEGG:gga:395400 CTD:29994 HOGENOM:HOG000231981
HOVERGEN:HBG050670 NextBio:20815484 Uniprot:Q9DE13
Length = 2130
Score = 128 (50.1 bits), Expect = 0.00059, P = 0.00059
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
V C +C+ E LLLLCD CD HTYC +P+GDWFC C
Sbjct: 1896 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPAC 1942
>UNIPROTKB|E1BNJ5 [details] [associations]
symbol:BAZ2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001739 InterPro:IPR001965
InterPro:IPR016177 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01429 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50982 SMART:SM00249 SMART:SM00297 SMART:SM00391
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
SUPFAM:SSF54171 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095335 Gene3D:3.30.890.10 OMA:DSDDQAD
EMBL:DAAA02004468 EMBL:DAAA02004469 EMBL:DAAA02004470
IPI:IPI00924289 Ensembl:ENSBTAT00000061234 Uniprot:E1BNJ5
Length = 2169
Score = 128 (50.1 bits), Expect = 0.00060, P = 0.00060
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
V C +C+ E LLLLCD CD HTYC +P+GDWFC C
Sbjct: 1934 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPAC 1980
>TAIR|locus:2150310 [details] [associations]
symbol:AT5G19430 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0048573 "photoperiodism, flowering"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 HSSP:P38398
eggNOG:NOG265787 HOGENOM:HOG000151161 ProtClustDB:CLSN2689629
EMBL:AF361602 EMBL:AY058228 IPI:IPI00525131 RefSeq:NP_568374.1
UniGene:At.19112 ProteinModelPortal:Q9ASY3 SMR:Q9ASY3 IntAct:Q9ASY3
EnsemblPlants:AT5G19430.1 GeneID:832063 KEGG:ath:AT5G19430
TAIR:At5g19430 InParanoid:Q9ASY3 OMA:CPQCKHP PhylomeDB:Q9ASY3
Genevestigator:Q9ASY3 Uniprot:Q9ASY3
Length = 255
Score = 107 (42.7 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 3 GLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESK--CPMCKRRF 53
G H C ICL + + C+H +C CI+ WA + CP CK F
Sbjct: 40 GNHGGCCAICLSEIPLQETAMVKGCEHTYCVTCILRWASCKESPTCPQCKHPF 92
Score = 50 (22.7 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 19/73 (26%), Positives = 32/73 (43%)
Query: 358 SQERSGQPCPSTSGTGQHLRSQDGSSC-DSHDVGKAWKMMKTAKSMLRKSERASNVCKSS 416
S + +P SG+G S GSS + D K +KT + R+++RA ++
Sbjct: 180 SGRQEARPVQRYSGSGSSSSSSSGSSSSEPKD-----KQVKTTNTTGRRAKRAMKREAAN 234
Query: 417 KNLNIKVNASKQA 429
K + A +A
Sbjct: 235 KAAEVTAAAKHEA 247
>MGI|MGI:1309478 [details] [associations]
symbol:Baz1a "bromodomain adjacent to zinc finger domain 1A"
species:10090 "Mus musculus" [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008623 "CHRAC" evidence=ISO] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 MGI:MGI:1309478 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0006261
GO:GO:0006338 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
eggNOG:COG5076 InterPro:IPR018359 GO:GO:0000228
HOGENOM:HOG000095179 HOVERGEN:HBG080889 OMA:SSFQNNV
OrthoDB:EOG49GKFR GO:GO:0008623 InterPro:IPR004022
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF02791 Pfam:PF10537
PROSITE:PS50827 PROSITE:PS51136 EMBL:AC138767 EMBL:AC154732
EMBL:CT030142 EMBL:AK135668 EMBL:AK166955 EMBL:AF033664
IPI:IPI00896695 UniGene:Mm.479583 IntAct:O88379 STRING:O88379
PhosphoSite:O88379 PaxDb:O88379 PRIDE:O88379
Ensembl:ENSMUST00000038926 UCSC:uc007nnz.2
GeneTree:ENSGT00660000095335 InParanoid:O88379 Bgee:O88379
CleanEx:MM_BAZ1A Genevestigator:O88379
GermOnline:ENSMUSG00000035021 Uniprot:O88379
Length = 1555
Score = 129 (50.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 31/97 (31%), Positives = 44/97 (45%)
Query: 98 RCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR-----DEHDN 151
RC +C+ ++LCD CD HTYCV AVP+GDWFC +C +
Sbjct: 1151 RCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKAVPDGDWFCPECRPKQRSRRLSSRQR 1210
Query: 152 AEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEI 188
+E+D E G + V + D E + E E+
Sbjct: 1211 PSLESDEEMEEGMEDDDDEV-DDDDEEGQSEEEEYEV 1246
Score = 48 (22.0 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 293 RMDQSTADNSTELGARTLRRCRDLQD-RIQAIRENWSALQNNSLRFSSIPVESGTKHRKR 351
R QST N+ + ++ LR+ R +++R + +++ + VE + H KR
Sbjct: 1298 RSQQSTPKNTAKSASKNLRKTRSAPPTETRSLRVGSRSTRHSPSALQDVFVELLSPHSKR 1357
>UNIPROTKB|E1C454 [details] [associations]
symbol:LOC100857350 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 GO:GO:0071564
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GeneTree:ENSGT00530000063194 OMA:CETSSQD
EMBL:AADN02035615 IPI:IPI00590407 Ensembl:ENSGALT00000018250
Uniprot:E1C454
Length = 410
Score = 118 (46.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C +C +E ++ CD+CD HT+CVG+ +A+P G W C DC
Sbjct: 348 CIMCGQPHHEEEMMFCDVCDRGYHTFCVGL-DAIPSGRWIC-DC 389
Score = 45 (20.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVC 35
CGICL + + +G+ ++ H C C
Sbjct: 292 CGICLKGKESNKKGKAEALIH--CSQC 316
>POMBASE|SPCC645.13 [details] [associations]
symbol:SPCC645.13 "transcription elongation regulator
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0034244 "negative regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] InterPro:IPR001965 InterPro:IPR003618
InterPro:IPR017890 InterPro:IPR019787 Pfam:PF00628 Pfam:PF07500
PROSITE:PS50016 PROSITE:PS51321 SMART:SM00249 SMART:SM00510
PomBase:SPCC645.13 GO:GO:0005634 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0019787
GO:GO:0034244 EMBL:AB027885 EMBL:AB027953 PIR:T41530
RefSeq:NP_588122.1 ProteinModelPortal:Q9Y7V2
EnsemblFungi:SPCC645.13.1 GeneID:2538700 KEGG:spo:SPCC645.13
OMA:ELESSEP OrthoDB:EOG4PRX19 NextBio:20799886 Gene3D:1.10.472.30
InterPro:IPR012921 Pfam:PF07744 SUPFAM:SSF46942 Uniprot:Q9Y7V2
Length = 721
Score = 123 (48.4 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 39/161 (24%), Positives = 66/161 (40%)
Query: 86 ASSRTADPYAYVRCNVCQGTT-YESLLLLCDLCDTASHTYCVGMGNA-VPEGDWFCHDCT 143
A + P VRC VC+ + CD CD H CVG+ + +PE ++C C
Sbjct: 10 AKASEKPPETVVRC-VCKSQEDIGDTWVQCDGCDCWQHASCVGLADKDIPES-YYCEVCH 67
Query: 144 VLRDEHDNAEIETDTETVFGDGSVSEVVVQNSDSEHNNAETVAEIVNFGGSQEVVENSGS 203
D + + + + ++++ N +E NN E +V+ + + + SG+
Sbjct: 68 SRSDVSSQVQNSPNKDE---EHQTADLLASNEGNEKNNEEN--NVVSSDSKEAITKESGA 122
Query: 204 ERSTVETVSDIVRTGGNQNTVECSGPDCIGADTIINSHEMP 244
E + E S G + S IG+ T +SH P
Sbjct: 123 ELESSEPASTNSNVGMTTRSGRQSPRTPIGSTTPKSSHSPP 163
Score = 46 (21.3 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 11/56 (19%), Positives = 32/56 (57%)
Query: 243 MPPGDAGFALFEIVSSIPHPKESLYRFWNSHPVSPRRGIVILDNATSRNGRMDQST 298
MP G++ L +++ + PK+ ++++ G+ +L+ ++SR+ ++++T
Sbjct: 592 MPSGNSVPELLDLLPKVDLPKDRNFQYF--------MGLFVLNKSSSRHESVERAT 639
>RGD|1306670 [details] [associations]
symbol:Rnf139 "ring finger protein 139" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008285 "negative regulation
of cell proliferation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0017148 "negative regulation of
translation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISO] [GO:0031396 "regulation of protein
ubiquitination" evidence=ISO] [GO:0060628 "regulation of ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0070613
"regulation of protein processing" evidence=ISO] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1306670
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AH009105 IPI:IPI00360791 ProteinModelPortal:Q9JLC5
UCSC:RGD:1306670 InParanoid:Q9JLC5 Genevestigator:Q9JLC5
Uniprot:Q9JLC5
Length = 100
Score = 96 (38.9 bits), Expect = 0.00081, P = 0.00080
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRR 52
C IC + S R I C+HYF +C+ +W I+ CPMC ++
Sbjct: 28 CXICYHEFTTSAR--ITPCNHYFHALCLRKWLYIQDTCPMCHQK 69
>ZFIN|ZDB-GENE-030131-2199 [details] [associations]
symbol:prkcbp1l "protein kinase C binding protein
1, like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2199
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX324190 IPI:IPI00611878
Ensembl:ENSDART00000124510 ArrayExpress:F1QYK7 Bgee:F1QYK7
Uniprot:F1QYK7
Length = 1131
Score = 98 (39.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C VC E +L C+LC H C+ + A PEGDWFC +C
Sbjct: 111 CWVCHR---EGQVLCCELCPRVYHAKCLKLA-AEPEGDWFCPEC 150
Score = 76 (31.8 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 66/287 (22%), Positives = 118/287 (41%)
Query: 174 NSDSEHNNAETVAEIVNFGGSQEVVENSGSERSTVETVSD--IVRTGGNQNTVECSGPDC 231
+SDSE + E GG ++ + + V T D +V+T G +T S
Sbjct: 707 DSDSERELVIDLGE--EQGGREKKKAKRDAPTAPVSTPKDQTVVKTDGKSST-STSVSAS 763
Query: 232 IGADTIINSHEMP-PGDAGFALFEIVSSIPHPKESLYRFWNS-HPVS--PRRGIVILDNA 287
DT +S P P DA + + +++P P + ++ PVS P V+
Sbjct: 764 PSTDTTSSSSSNPAPKDAASSAIKPPAAVPAPSTTQSSSSSAAQPVSTVPSTASVVKKQR 823
Query: 288 T---SRNGRMDQSTADNSTELGARTLRRCRDLQDRIQAIRENWSALQNNSLRFSSIP--V 342
+ + Q A S G +++ + Q Q+ +A Q+ + SS
Sbjct: 824 PLLPKESTQPAQRPATWSPAAGKWHVQKVQKQQQPQQSETVPQTATQSQTQSQSSANNNS 883
Query: 343 ESGTKHRKRHNVSEVSQERSGQPCPSTSGTGQHLRSQDG------SSCD-SHDVGK-AWK 394
S T+++ R +V +V Q+ S P+ +G+G + S G +S D + D+ K K
Sbjct: 884 SSSTRYQTRQSV-KVHQKDSS---PANTGSGSSISSLAGDFLTPPASADVAADIAKYTTK 939
Query: 395 MMKTAKSMLRKSERASNVCKSSKNLNI-KVNASKQAMNTRSSLHDAE 440
MM K + +E +++ KS+ I ++ + + LH E
Sbjct: 940 MMDVIKGTM--TEIYNDLSKSTTGNTIAEIRRLRIEIEKLQWLHQQE 984
>UNIPROTKB|F1SE69 [details] [associations]
symbol:TOPORS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032391 "photoreceptor connecting cilium" evidence=IDA]
[GO:0070936 "protein K48-linked ubiquitination" evidence=IEA]
[GO:0051457 "maintenance of protein location in nucleus"
evidence=IEA] [GO:0051443 "positive regulation of ubiquitin-protein
ligase activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044547 "DNA
topoisomerase binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0036064 "cilium basal body" evidence=IEA] [GO:0019789 "SUMO
ligase activity" evidence=IEA] [GO:0016925 "protein sumoylation"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003823 "antigen binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000930 "gamma-tubulin
complex" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0045893
GO:GO:0008630 GO:GO:0043161 GO:GO:0005814 GO:GO:0003823
GO:GO:0046872 GO:GO:0003677 GO:GO:0016607 GO:GO:0016605
GO:GO:0008270 GO:GO:0042127 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000922 GO:GO:0000930 GO:GO:0051457
InterPro:IPR017907 GO:GO:0070936 GO:GO:0032391 GO:GO:0051443
GO:GO:0016925 GO:GO:0006513 GO:GO:0036064 GO:GO:0019789
GeneTree:ENSGT00530000064170 OMA:DIINFRR EMBL:CU928691
Ensembl:ENSSSCT00000012046 Uniprot:F1SE69
Length = 1049
Score = 125 (49.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C ICL D ++ +D C H FCF C+ EW+K +++CP+CK+ F SI
Sbjct: 106 CPICL-DRFDNV-SYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSI 151
Score = 47 (21.6 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 397 KTAKSMLRKSERASNVCKSS-KNLNIKVNASKQAMNTRSSLHDAERQQPGNRSVMSD--R 453
++ S R R+ + K+ K+ K SK++ + SS R + +R+ S R
Sbjct: 600 RSRSSDSRSQSRSGHDQKNRRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSR 659
Query: 454 RNQNTAMTVESSERLQSTYS 473
R+Q +++ ES+ R +S S
Sbjct: 660 RSQTLSLSSESTSRSRSRSS 679
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 673 673 0.0010 120 3 11 22 0.42 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 66
No. of states in DFA: 624 (66 KB)
Total size of DFA: 386 KB (2187 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 69.93u 0.11s 70.04t Elapsed: 00:00:03
Total cpu time: 69.95u 0.11s 70.06t Elapsed: 00:00:03
Start: Fri May 10 12:34:09 2013 End: Fri May 10 12:34:12 2013