BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005857
(673 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVF 65
+ SC ICL G ++C HYFC CI+EW++ + CP+ + F I
Sbjct: 106 AESCPICLNAFRDQAVGTPETCAHYFCLDCIIEWSRNANSCPVDRTVFKCI--------C 157
Query: 66 PRERFVVVPKRDQIYGGFGIASSRT--ADPYAYVRCNVCQGTTYESLLLLCDLCDTASHT 123
R +F +I + +++ A+ C VC + E LLLCD CD H
Sbjct: 158 IRAQF-----NGKILKKIPVENTKACEAEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHM 212
Query: 124 YCVGMG-NAVPEGDWFCHDCTV--LRDEHDNAEI 154
C+ VP +WFC +CTV + HD A +
Sbjct: 213 ECLDPPLQEVPVDEWFCPECTVPGVDPTHDAAPV 246
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus
norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVF 65
+ SC ICL G ++C HYFC CI+EW++ + CP+ + F I
Sbjct: 106 AESCPICLNAFRDQAVGTPETCAHYFCLDCIIEWSRNANSCPVDRTIFKCI--------C 157
Query: 66 PRERFVVVPKRDQIYGGFGIASSRT-----ADPYAYVRCNVCQGTTYESLLLLCDLCDTA 120
R +F +I + ++R A+ C VC + E LLLCD CD
Sbjct: 158 IRAQF-----NGKILKKIPVENTRACEDEEAEEEDPTFCEVCGRSDREDRLLLCDGCDAG 212
Query: 121 SHTYCVGMG-NAVPEGDWFCHDCTV--LRDEHDNAEI 154
H C+ VP +WFC +C V + HD A +
Sbjct: 213 YHMECLDPPLQEVPVDEWFCPECAVPGVDPTHDAAPV 249
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRF--TSIRRPPKDG 63
+ SC ICL G ++C HYFC CI+EW+K + CP+ + F IR
Sbjct: 105 AESCPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCICIR-----A 159
Query: 64 VFPRERFVVVPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHT 123
F + +P + AS DP C VC + E LLLCD CD H
Sbjct: 160 QFGGKILRKIPVENT------KASEEEEDP---TFCEVCGRSDREDRLLLCDGCDAGYHM 210
Query: 124 YCVGMG-NAVPEGDWFCHDCTV 144
C+ VP +WFC +C
Sbjct: 211 ECLDPPLQEVPVDEWFCPECAA 232
>sp|O94400|YQF7_SCHPO PHD and RING finger domain-containing protein C126.07c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC126.07c PE=4 SV=1
Length = 571
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 24/129 (18%)
Query: 27 CDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVF-----PRERFVVVPKRDQIYG 81
C HYF C+ W ++ + CP+C+ F + V P R V ++ Q
Sbjct: 56 CGHYFHNHCLESWCRVANTCPLCRTEFLKV------DVLEFVKGPWYRAYPVEEKTQSVA 109
Query: 82 GFGIASSRTADPY-----AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGD 136
G +P+ RC +C + + +LLLCD CD A HTYC+ M +AVP +
Sbjct: 110 NAG-------EPFEDEGSETCRCVICGRSDHAEVLLLCDGCDDAYHTYCLNM-DAVPIEE 161
Query: 137 WFCHDCTVL 145
++C +C +L
Sbjct: 162 FYCPNCVLL 170
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYC-VGMGNAVPEGDWFCHDCTVLRDEHD 150
V C C+ + LLLLCD CD HTYC N +PEGDWFC C L+ E +
Sbjct: 1477 VTCLYCRKGDNDELLLLCDSCDRGCHTYCHRPRMNEIPEGDWFCPTCISLQSESE 1531
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYC-VGMGNAVPEGDWFCHDC 142
V C +C+ E LLLLCD CD HTYC +P+GDWFC C
Sbjct: 1932 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPAC 1978
>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus
gallus GN=BAZ2B PE=2 SV=1
Length = 2130
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYC-VGMGNAVPEGDWFCHDC 142
V C +C+ E LLLLCD CD HTYC +P+GDWFC C
Sbjct: 1896 VYCQICRKGDNEELLLLCDGCDKGCHTYCHRPKITTIPDGDWFCPAC 1942
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
RC +C+ ++LCD CD HTYCV AVP+GDWFC +C
Sbjct: 1150 ARCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKAVPDGDWFCPEC 1196
>sp|Q9NS56|TOPRS_HUMAN E3 ubiquitin-protein ligase Topors OS=Homo sapiens GN=TOPORS PE=1
SV=1
Length = 1045
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 23/106 (21%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI------------ 56
C ICL D ++ +D C H FCF C+ EW+K +++CP+CK+ F SI
Sbjct: 103 CPICL-DRFDNV-SYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKE 160
Query: 57 --RRPPKDGVF--PRERF-----VVVPKRDQIYGGFGIASSRTADP 93
RP +G F P RF + + +Y G + RT P
Sbjct: 161 YVLRPSYNGSFVTPDRRFRYRTTLTRERNASVYSPSGPVNRRTTTP 206
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
RC +C+ ++LCD CD HTYCV VPEGDWFC +C
Sbjct: 1149 ARCKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPEC 1195
>sp|Q80Z37|TOPRS_MOUSE E3 ubiquitin-protein ligase Topors OS=Mus musculus GN=Topors PE=1
SV=1
Length = 1033
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C ICL D ++ +D C H FCF C+ EW+K +++CP+CK+ F SI
Sbjct: 104 CPICL-DRFDNV-SYLDRCLHKFCFRCVQEWSKNKAECPLCKQPFDSI 149
>sp|Q9V8P9|TOPRS_DROME E3 ubiquitin-protein ligase Topors OS=Drosophila melanogaster
GN=Topors PE=1 SV=1
Length = 1038
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 25 DSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
DSC H FCF C+ EW+KI+ +CP+CK+ F +I
Sbjct: 116 DSCMHQFCFKCLCEWSKIKPECPLCKQPFRTI 147
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYC-VGMGNAVPEGDWFCHDC 142
V C VC+ + LLLCD CD H YC AVPEGDWFC C
Sbjct: 1663 VTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCAVC 1709
>sp|Q8WUB8|PHF10_HUMAN PHD finger protein 10 OS=Homo sapiens GN=PHF10 PE=1 SV=3
Length = 498
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C +C +E ++ CD+CD HT+CVG+G A+P G W C C
Sbjct: 436 CIICGQPHHEEEMMFCDMCDRGYHTFCVGLG-AIPSGRWICDCC 478
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYC-VGMGNAVPEGDWFCHDC 142
V C VC+ + LLLCD CD H YC AVPEGDWFC C
Sbjct: 1677 VTCLVCRKGDNDEFLLLCDGCDRGCHIYCHRPKMEAVPEGDWFCTVC 1723
>sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain protein 1A (Fragment)
OS=Xenopus laevis GN=baz1a PE=2 SV=1
Length = 627
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
RC VC+ ++LCD CD H YCV VPEGDWFC +C
Sbjct: 223 ARCKVCRKKGDGESMVLCDGCDRGHHIYCVRPKLKYVPEGDWFCPEC 269
>sp|Q6NWE1|PHF10_DANRE PHD finger protein 10 OS=Danio rerio GN=phf10 PE=2 SV=2
Length = 490
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCT 143
C VCQ +E ++ CD CD HT+CVGM +++P G W C C+
Sbjct: 428 CTVCQQPHHEEEMMFCDKCDRGFHTFCVGM-DSIPMGCWVCDLCS 471
>sp|Q2T9V9|PHF10_BOVIN PHD finger protein 10 OS=Bos taurus GN=PHF10 PE=2 SV=1
Length = 410
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C +C +E ++ CD+CD HT+CVG+G A+P G W C C
Sbjct: 348 CIICGQPHHEEEMMFCDVCDRGYHTFCVGLG-AIPSGRWICDCC 390
>sp|Q4V7A6|PHF10_RAT PHD finger protein 10 OS=Rattus norvegicus GN=Phf10 PE=2 SV=2
Length = 497
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C +C +E ++ CD+CD HT+CVG+G A+P G W C C
Sbjct: 435 CIICGQPHHEEEMMFCDVCDRGYHTFCVGLG-AIPSGRWICDCC 477
>sp|Q06554|IRC20_YEAST Uncharacterized ATP-dependent helicase IRC20 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IRC20 PE=1
SV=1
Length = 1556
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 8 SCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRR----PPKDG 63
SC ICL G+ G I C HYFC CI+ W + SKCP+CK F SI K+
Sbjct: 1238 SCSICL---GEVEIGAIIKCGHYFCKSCILTWLRAHSKCPICK-GFCSISEVYNFKFKNS 1293
Query: 64 VFPRERFVVVPKRD 77
RE+ + P+R+
Sbjct: 1294 TEKREKEIQEPRRE 1307
>sp|Q9D8M7|PHF10_MOUSE PHD finger protein 10 OS=Mus musculus GN=Phf10 PE=1 SV=4
Length = 497
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C +C +E ++ CD+CD HT+CVG+G A+P G W C C
Sbjct: 435 CIICGQPHHEEEMMFCDVCDRGYHTFCVGLG-AIPSGRWICDCC 477
>sp|Q63ZP1|PHF10_XENLA PHD finger protein 10 OS=Xenopus laevis GN=phf10 PE=2 SV=2
Length = 506
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142
C +C +E ++ CD CD HT+CVG+G A+P G W C C
Sbjct: 444 CIICGQPHHEEEMMFCDTCDRGYHTFCVGLG-ALPSGRWICDCC 486
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 84 GIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYC-VGMGNAVPEGDWFCHDC 142
G + DP C++C E +LLCD CD + HT+C + ++P+G+W C C
Sbjct: 436 GEPPALIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRC 495
Query: 143 TV 144
V
Sbjct: 496 VV 497
>sp|A7E320|UHRF1_BOVIN E3 ubiquitin-protein ligase UHRF1 OS=Bos taurus GN=UHRF1 PE=2 SV=1
Length = 786
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCV--GMGNAVPEGDWFCHDCTV 144
C+VC G L+CD CD A H YC+ + + PE +W+C DC +
Sbjct: 322 CHVCGGKQDPDKQLMCDECDMAFHIYCLRPPLSSVPPEEEWYCPDCRI 369
>sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis
thaliana GN=MBD9 PE=2 SV=1
Length = 2176
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 93 PYAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNA-VPEGDWFCHDCTVLR 146
P+ C VC + +LLCD CD HTYC+ +P+G+W+C C + +
Sbjct: 1284 PWDEGVCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCVIAK 1338
Score = 41.2 bits (95), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 86 ASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
A + +P C C L+++CD C+ H CV G A P DW C DC
Sbjct: 73 APAEVPEPDRDASCGACGRPESIELVVVCDACERGFHMSCVNDGVEAAPSADWMCSDC 130
>sp|Q9W636|REQUB_XENLA Zinc finger protein ubi-d4 B (Fragment) OS=Xenopus laevis GN=req-b
PE=2 SV=2
Length = 366
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNA-VPEGDWFCHDCT-VLRDE 148
CN+C + + LL CD CD H YC+ A PEG W CH C +L+D+
Sbjct: 307 CNICGTSENDDQLLFCDDCDRGYHMYCLSPPVAEPPEGSWSCHLCLDLLKDK 358
>sp|B1AUE5|PEX10_MOUSE Peroxisome biogenesis factor 10 OS=Mus musculus GN=Pex10 PE=2 SV=1
Length = 324
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVFPR 67
C +CL + S C H FC+ CI EW +++CP+C+ +F PP+ V+ R
Sbjct: 271 CTLCLEERRHST---ATPCGHLFCWECITEWCNTKTECPLCREKF-----PPQKLVYLR 321
>sp|Q96T23|RSF1_HUMAN Remodeling and spacing factor 1 OS=Homo sapiens GN=RSF1 PE=1 SV=2
Length = 1441
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
C C + L+LLCD CD+ HT C+ +P+G+WFC C
Sbjct: 894 CKKCGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPC 938
>sp|Q9W638|REQUA_XENLA Zinc finger protein ubi-d4 A OS=Xenopus laevis GN=req-a PE=2 SV=1
Length = 388
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMGNA-VPEGDWFCHDCT-VLRDE 148
CN+C + + LL CD CD H YC+ A PEG W CH C +L+D+
Sbjct: 329 CNICGTSENDDQLLFCDDCDRGYHMYCLVPPVAEPPEGSWSCHLCLDLLKDK 380
>sp|Q92785|REQU_HUMAN Zinc finger protein ubi-d4 OS=Homo sapiens GN=DPF2 PE=1 SV=2
Length = 391
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLRDE 148
CN+C + + LL CD CD H YC+ + PEG W CH C L E
Sbjct: 330 CNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKE 380
>sp|P58268|REQU_CHICK Zinc finger protein ubi-d4 OS=Gallus gallus GN=REQ PE=2 SV=1
Length = 405
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLRDE 148
CN+C + + LL CD CD H YC+ + PEG W CH C L E
Sbjct: 344 CNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLCLDLLKE 394
>sp|Q61103|REQU_MOUSE Zinc finger protein ubi-d4 OS=Mus musculus GN=Dpf2 PE=1 SV=1
Length = 391
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLRDE 148
CN+C + + LL CD CD H YC+ + PEG W CH C L E
Sbjct: 330 CNLCGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKE 380
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1
SV=2
Length = 5588
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCT 143
+ C VC + S LLLCD CD + HTYC+ VP+G W C C
Sbjct: 1384 IVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCV 1431
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR 146
C C+ +S +L+C+ CD HT+C+ +P W C C + R
Sbjct: 276 CQSCRKPGNDSKMLVCETCDKGYHTFCLKPPMEDLPAHSWKCKTCRLCR 324
>sp|Q12311|NTO1_YEAST NuA3 HAT complex component NTO1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=NTO1 PE=1 SV=1
Length = 748
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 99 CNVCQGTTYESL--LLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTV 144
C VC GT ++L ++ CD CD A H C G+ +PEG W C C +
Sbjct: 266 CAVCLGTDSDNLNTIVFCDGCDIAVHQECYGII-FIPEGKWLCRRCMI 312
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2 PE=1
SV=2
Length = 5537
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCT 143
+ C VC + S LLLCD CD + HTYC+ VP+G W C C
Sbjct: 1428 IVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCV 1475
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR 146
C C+ +S +L+C+ CD HT+C+ +P W C C V R
Sbjct: 276 CQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKACRVCR 324
>sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=Xenopus laevis GN=baz1b PE=2 SV=2
Length = 1441
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCV-GMGNAVPEGDWFCHDC 142
RC VC+ + L+LCD C+ A H +C+ + +P+G+W C C
Sbjct: 1152 ARCKVCRKKGEDDKLILCDECNKAFHLFCLRPVLFNIPDGEWLCPAC 1198
>sp|Q99590|SCAFB_HUMAN Protein SCAF11 OS=Homo sapiens GN=SCAF11 PE=1 SV=2
Length = 1463
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C ICL + G +SC+H FC CI++WA+ + CP+ ++ F ++
Sbjct: 41 CPICLNCLLEKEVGFPESCNHVFCMTCILKWAETLASCPIDRKPFQAV 88
>sp|Q23541|KDM5_CAEEL Lysine-specific demethylase rbr-2 OS=Caenorhabditis elegans
GN=rbr-2 PE=1 SV=2
Length = 1477
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 97 VRCNVCQGTTYESLLLLCDL--CDTASHTYCVG-MGNAVPEGDWFCHDCTVLRDEHDNAE 153
V C C E LLLLCD+ C+ HTYC + + VPEG+W C C E ++A+
Sbjct: 320 VFCVACNEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEGEWRCPKCI----ESEDAK 375
Query: 154 IETD 157
I D
Sbjct: 376 IGLD 379
>sp|Q8VDF2|UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1 OS=Mus musculus GN=Uhrf1 PE=1
SV=2
Length = 782
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVG--MGNAVPEGDWFCHDC 142
C+VC G LLCD CD A H YC+ + + PE +W+C C
Sbjct: 323 CHVCGGREAPEKQLLCDECDMAFHLYCLKPPLTSVPPEPEWYCPSC 368
>sp|Q80Y84|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1
Length = 1544
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 87 SSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYC-VGMGNAVPEGDWFCHDC 142
+ +TA C +C E LLLCD CD + HT+C V + VP+GDW C C
Sbjct: 300 AKKTATAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKC 356
>sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=Homo sapiens GN=MLL3 PE=1
SV=3
Length = 4911
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR 146
C C T LLLCD CD + HTYC+ VP+G W C C R
Sbjct: 1010 CEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCR 1058
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCV-GMGNAVPEGDWFCHDCTV 144
C C+ + +S +L+CD CD HT+C+ + +VP W C +C +
Sbjct: 391 CQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRI 437
>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus musculus GN=Mll3 PE=2
SV=2
Length = 4903
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR 146
C C T LLLCD CD + HTYC+ VP+G W C C R
Sbjct: 1003 CEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCR 1051
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCV-GMGNAVPEGDWFCHDCTV 144
C C+ + +S +L+CD CD HT+C+ + +VP W C +C +
Sbjct: 390 CQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRI 436
>sp|Q61T02|KDM5_CAEBR Lysine-specific demethylase rbr-2 OS=Caenorhabditis briggsae
GN=rbr-2 PE=3 SV=2
Length = 1482
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 97 VRCNVCQGTTYESLLLLCDL--CDTASHTYCVG-MGNAVPEGDWFCHDCTVLRDEHDNAE 153
V C C E LLLLCD+ C++ HTYC + + VPEG+W C C E ++A+
Sbjct: 323 VYCVSCNEGKDEDLLLLCDIEGCNSGRHTYCCDPVLDEVPEGEWRCPKCI----ESEDAK 378
Query: 154 IETD 157
I D
Sbjct: 379 IGLD 382
>sp|A2BIL7|BAZ1B_DANRE Tyrosine-protein kinase BAZ1B OS=Danio rerio GN=baz1b PE=1 SV=2
Length = 1536
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
RC VC+ + L+LCD C+ A H +C+ +P G+W C C
Sbjct: 1203 ARCKVCRRKGEDDKLILCDECNKAFHLFCLRPALYRIPAGEWLCPAC 1249
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
RC VC+ + L+LCD C+ A H +C+ VP+G+W C C
Sbjct: 1185 ARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDC 142
RC VC+ + L+LCD C+ A H +C+ VP+G+W C C
Sbjct: 1185 ARCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
>sp|F6UA42|UHRF1_XENTR E3 ubiquitin-protein ligase UHRF1 OS=Xenopus tropicalis GN=uhrf1
PE=3 SV=2
Length = 775
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEG-DWFCHDC 142
C VC G LLCD CD A H YC+ +A+P+ DW+C DC
Sbjct: 318 CYVCGGKQDPEKQLLCDECDMAFHIYCLKPPLSAIPQDEDWYCPDC 363
>sp|Q5F3R2|KDM5B_CHICK Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1
Length = 1522
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 86 ASSRTADPYAYVR---CNVCQGTTYESLLLLCDLCDTASHTYC-VGMGNAVPEGDWFCHD 141
A +R+ P + V C +C E LLLCD CD + HT+C + + VP+GDW C
Sbjct: 271 AKARSKKPTSAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQ 330
Query: 142 C 142
C
Sbjct: 331 C 331
>sp|P29129|ICP0_SUHVF E3 ubiquitin-protein ligase ICP0 OS=Suid herpesvirus 1 (strain
Indiana-Funkhauser / Becker) GN=EP0 PE=2 SV=1
Length = 410
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 9 CGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56
C ICL + + Q C H FC CI W + CP+C R TSI
Sbjct: 46 CPICL--DVAATEAQTLPCMHKFCLDCIQRWTLTSTACPLCNARVTSI 91
>sp|P47156|JHD2_YEAST Histone demethylase JHD2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=JHD2 PE=1 SV=1
Length = 728
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 99 CNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTV 144
C VC+ T +LCD CD H YC+ VP GDW C+ C V
Sbjct: 238 CIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTCIV 284
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,595,421
Number of Sequences: 539616
Number of extensions: 10415997
Number of successful extensions: 29923
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 339
Number of HSP's that attempted gapping in prelim test: 28989
Number of HSP's gapped (non-prelim): 928
length of query: 673
length of database: 191,569,459
effective HSP length: 124
effective length of query: 549
effective length of database: 124,657,075
effective search space: 68436734175
effective search space used: 68436734175
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)