Query 005857
Match_columns 673
No_of_seqs 236 out of 2051
Neff 4.5
Searched_HMMs 29240
Date Mon Mar 25 09:19:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005857.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005857hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ysm_A Myeloid/lymphoid or mix 99.3 4.9E-13 1.7E-17 120.0 2.6 97 2-145 3-104 (111)
2 3v43_A Histone acetyltransfera 99.2 1E-11 3.4E-16 112.2 7.9 92 6-144 5-111 (112)
3 2kwj_A Zinc finger protein DPF 99.2 3.8E-12 1.3E-16 115.3 4.0 92 7-145 2-108 (114)
4 4ap4_A E3 ubiquitin ligase RNF 99.1 9.3E-12 3.2E-16 111.5 1.4 112 4-147 5-124 (133)
5 2ep4_A Ring finger protein 24; 99.1 9.7E-11 3.3E-15 96.4 4.9 55 3-57 12-66 (74)
6 2kiz_A E3 ubiquitin-protein li 99.0 1.4E-10 4.8E-15 94.2 5.1 54 4-57 12-65 (69)
7 1iym_A EL5; ring-H2 finger, ub 99.0 9.8E-11 3.3E-15 90.9 3.7 51 4-54 3-54 (55)
8 1x4j_A Ring finger protein 38; 99.0 1.1E-10 3.9E-15 96.5 3.6 52 4-55 21-72 (75)
9 2ect_A Ring finger protein 126 99.0 2E-10 7E-15 95.3 4.9 54 4-57 13-66 (78)
10 1f62_A Transcription factor WS 99.0 1.5E-10 5.1E-15 90.6 3.0 48 98-145 2-50 (51)
11 2l0b_A E3 ubiquitin-protein li 99.0 2E-10 6.7E-15 99.1 3.5 52 4-55 38-89 (91)
12 1v87_A Deltex protein 2; ring- 99.0 4.4E-10 1.5E-14 99.7 5.7 54 4-57 23-96 (114)
13 2ecm_A Ring finger and CHY zin 99.0 3.9E-10 1.3E-14 87.4 4.3 51 4-54 3-54 (55)
14 3ng2_A RNF4, snurf, ring finge 98.9 3.9E-10 1.3E-14 91.5 4.2 53 3-55 7-63 (71)
15 2ea6_A Ring finger protein 4; 98.9 3.4E-10 1.2E-14 91.1 3.7 51 4-54 13-67 (69)
16 1chc_A Equine herpes virus-1 r 98.9 6.1E-10 2.1E-14 90.0 5.2 52 4-57 3-54 (68)
17 2djb_A Polycomb group ring fin 98.9 8.4E-10 2.9E-14 90.7 5.0 52 4-57 13-64 (72)
18 2ecl_A Ring-box protein 2; RNF 98.9 6E-10 2.1E-14 94.4 3.6 53 3-55 12-76 (81)
19 2d8t_A Dactylidin, ring finger 98.9 4.1E-10 1.4E-14 92.4 2.5 51 3-56 12-62 (71)
20 2ct2_A Tripartite motif protei 98.9 1.1E-09 3.8E-14 92.2 5.2 52 4-55 13-68 (88)
21 2e6r_A Jumonji/ARID domain-con 98.9 5.4E-10 1.8E-14 98.1 3.0 52 94-145 14-66 (92)
22 2yur_A Retinoblastoma-binding 98.9 1.5E-09 5.3E-14 89.9 5.5 49 4-55 13-64 (74)
23 2xeu_A Ring finger protein 4; 98.9 6.3E-10 2.2E-14 88.2 2.9 51 5-55 2-56 (64)
24 1mm2_A MI2-beta; PHD, zinc fin 98.9 1.5E-09 5.1E-14 88.4 5.1 49 95-146 8-57 (61)
25 2csy_A Zinc finger protein 183 98.9 1E-09 3.5E-14 92.0 4.2 48 4-54 13-60 (81)
26 1xwh_A Autoimmune regulator; P 98.9 6.6E-10 2.3E-14 91.7 3.0 51 96-149 8-59 (66)
27 4ayc_A E3 ubiquitin-protein li 98.9 4.6E-10 1.6E-14 103.6 2.3 49 5-56 52-100 (138)
28 2ysl_A Tripartite motif-contai 98.8 1.3E-09 4.5E-14 89.0 3.6 49 4-55 18-69 (73)
29 2lri_C Autoimmune regulator; Z 98.8 1.6E-09 5.4E-14 89.9 3.9 48 95-145 11-59 (66)
30 3lrq_A E3 ubiquitin-protein li 98.8 1.3E-09 4.5E-14 95.5 3.2 48 5-55 21-70 (100)
31 2ku3_A Bromodomain-containing 98.8 7.2E-10 2.5E-14 93.2 1.5 50 95-145 15-66 (71)
32 2ecy_A TNF receptor-associated 98.8 2.1E-09 7.3E-14 86.7 4.2 49 4-55 13-62 (66)
33 2ecw_A Tripartite motif-contai 98.8 2.8E-09 9.6E-14 88.6 4.9 49 4-55 17-71 (85)
34 1fp0_A KAP-1 corepressor; PHD 98.8 4.3E-09 1.5E-13 92.1 5.7 49 95-146 24-73 (88)
35 3dpl_R Ring-box protein 1; ubi 98.8 2.2E-09 7.7E-14 96.3 4.0 52 4-55 35-101 (106)
36 3ztg_A E3 ubiquitin-protein li 98.8 3.3E-09 1.1E-13 90.6 4.6 48 4-54 11-61 (92)
37 1t1h_A Gspef-atpub14, armadill 98.8 2.4E-09 8.2E-14 88.8 3.5 49 4-55 6-55 (78)
38 3asl_A E3 ubiquitin-protein li 98.8 2.9E-09 9.8E-14 89.2 3.9 47 98-144 20-68 (70)
39 2e6s_A E3 ubiquitin-protein li 98.8 2.9E-09 1E-13 90.8 3.9 47 98-144 28-76 (77)
40 2ecv_A Tripartite motif-contai 98.8 4E-09 1.4E-13 87.7 4.5 49 4-55 17-71 (85)
41 1wev_A Riken cDNA 1110020M19; 98.8 1.6E-09 5.6E-14 94.3 2.1 51 96-146 16-73 (88)
42 2ysj_A Tripartite motif-contai 98.8 4.9E-09 1.7E-13 83.7 4.6 43 4-49 18-63 (63)
43 2l43_A N-teminal domain from h 98.8 1.6E-09 5.5E-14 94.4 1.7 51 95-146 24-76 (88)
44 2ecn_A Ring finger protein 141 98.8 1.4E-09 4.7E-14 88.5 1.1 50 4-57 13-62 (70)
45 2egp_A Tripartite motif-contai 98.8 1.5E-09 5.2E-14 89.8 1.3 49 4-55 10-65 (79)
46 2yql_A PHD finger protein 21A; 98.7 3.2E-09 1.1E-13 84.9 2.7 46 96-144 9-55 (56)
47 3fl2_A E3 ubiquitin-protein li 98.7 3.8E-09 1.3E-13 95.5 3.2 48 5-55 51-99 (124)
48 3shb_A E3 ubiquitin-protein li 98.7 4.9E-09 1.7E-13 89.5 3.6 47 98-144 28-76 (77)
49 2y43_A E3 ubiquitin-protein li 98.7 3.9E-09 1.3E-13 91.7 3.0 48 5-55 21-69 (99)
50 2l5u_A Chromodomain-helicase-D 98.7 4.8E-09 1.6E-13 85.4 3.0 46 96-144 11-57 (61)
51 1g25_A CDK-activating kinase a 98.7 6.4E-09 2.2E-13 83.7 3.8 51 5-55 2-55 (65)
52 2ckl_A Polycomb group ring fin 98.7 5.1E-09 1.8E-13 92.4 3.3 49 4-55 13-62 (108)
53 2yt5_A Metal-response element- 98.7 3.7E-09 1.3E-13 86.5 2.0 53 94-146 4-62 (66)
54 2puy_A PHD finger protein 21A; 98.7 5.7E-09 2E-13 84.4 2.5 47 96-145 5-52 (60)
55 2ecj_A Tripartite motif-contai 98.7 8.6E-09 2.9E-13 80.4 3.0 43 4-49 13-58 (58)
56 4a0k_B E3 ubiquitin-protein li 98.7 3.3E-09 1.1E-13 97.1 0.4 52 4-55 46-112 (117)
57 2k16_A Transcription initiatio 98.6 1.1E-08 3.7E-13 85.9 2.8 53 94-146 16-69 (75)
58 1jm7_A BRCA1, breast cancer ty 98.6 1.1E-08 3.8E-13 89.9 2.9 48 5-55 20-70 (112)
59 2d8s_A Cellular modulator of i 98.6 2.4E-08 8.2E-13 85.3 4.9 53 4-57 13-72 (80)
60 2kr4_A Ubiquitin conjugation f 98.6 1.8E-08 6.3E-13 86.3 3.9 48 5-55 13-60 (85)
61 3l11_A E3 ubiquitin-protein li 98.6 4.4E-09 1.5E-13 93.7 -0.0 49 4-55 13-62 (115)
62 1e4u_A Transcriptional repress 98.6 1.8E-08 6.3E-13 85.5 3.6 55 3-57 8-64 (78)
63 1z6u_A NP95-like ring finger p 98.6 1.4E-08 4.9E-13 95.6 3.2 49 5-56 77-126 (150)
64 2ckl_B Ubiquitin ligase protei 98.6 1.4E-08 4.9E-13 95.9 2.9 49 5-55 53-102 (165)
65 3u5n_A E3 ubiquitin-protein li 98.6 2E-08 6.9E-13 99.1 4.0 50 95-147 6-56 (207)
66 3hct_A TNF receptor-associated 98.6 2.6E-08 8.8E-13 89.5 4.1 49 4-55 16-65 (118)
67 1bor_A Transcription factor PM 98.6 9.9E-09 3.4E-13 81.1 0.7 48 2-55 2-49 (56)
68 1rmd_A RAG1; V(D)J recombinati 98.6 2.5E-08 8.6E-13 88.9 3.2 50 5-57 22-72 (116)
69 3ask_A E3 ubiquitin-protein li 98.5 2.7E-08 9.1E-13 100.3 3.1 48 97-144 175-224 (226)
70 3o36_A Transcription intermedi 98.5 5E-08 1.7E-12 94.4 4.7 47 97-146 5-52 (184)
71 2kre_A Ubiquitin conjugation f 98.5 3E-08 1E-12 87.8 2.6 48 5-55 28-75 (100)
72 1wgm_A Ubiquitin conjugation f 98.5 4E-08 1.4E-12 86.7 3.2 48 5-55 21-69 (98)
73 4ap4_A E3 ubiquitin ligase RNF 98.5 4.8E-08 1.6E-12 87.3 3.2 52 4-55 70-125 (133)
74 2vje_A E3 ubiquitin-protein li 98.5 4.9E-08 1.7E-12 79.4 2.9 52 2-56 4-58 (64)
75 1jm7_B BARD1, BRCA1-associated 98.5 2.3E-08 7.9E-13 89.7 0.8 45 5-54 21-66 (117)
76 1wen_A Inhibitor of growth fam 98.4 1.6E-07 5.4E-12 78.9 5.1 54 90-146 10-66 (71)
77 4ic3_A E3 ubiquitin-protein li 98.4 4.9E-08 1.7E-12 81.3 1.7 46 5-57 23-69 (74)
78 2yu4_A E3 SUMO-protein ligase 98.4 1.5E-07 5.2E-12 81.8 4.4 48 2-52 3-59 (94)
79 2ro1_A Transcription intermedi 98.4 1.5E-07 5.1E-12 92.1 4.6 47 97-146 3-50 (189)
80 2lv9_A Histone-lysine N-methyl 98.4 1.9E-07 6.5E-12 82.7 4.9 48 96-145 28-76 (98)
81 2c2l_A CHIP, carboxy terminus 98.4 1.6E-07 5.6E-12 93.6 4.4 48 5-55 207-255 (281)
82 1weu_A Inhibitor of growth fam 98.4 4E-07 1.4E-11 80.1 5.9 54 90-146 30-86 (91)
83 3knv_A TNF receptor-associated 98.4 6.6E-08 2.3E-12 90.3 0.8 48 4-54 29-77 (141)
84 2vnf_A ING 4, P29ING4, inhibit 98.3 8.3E-08 2.8E-12 78.0 0.6 51 92-145 6-59 (60)
85 2vje_B MDM4 protein; proto-onc 98.3 2.5E-07 8.5E-12 75.0 2.8 52 4-56 5-57 (63)
86 3c6w_A P28ING5, inhibitor of g 98.3 1.1E-07 3.8E-12 77.1 0.7 51 92-145 5-58 (59)
87 2y1n_A E3 ubiquitin-protein li 98.3 3.8E-07 1.3E-11 98.4 4.6 49 6-57 332-381 (389)
88 3hcs_A TNF receptor-associated 98.3 3.8E-07 1.3E-11 86.4 3.8 49 4-55 16-65 (170)
89 2ct0_A Non-SMC element 1 homol 98.2 3.9E-07 1.3E-11 77.2 3.0 48 6-55 15-64 (74)
90 2ecg_A Baculoviral IAP repeat- 98.2 3.4E-07 1.1E-11 76.2 2.5 46 5-57 24-70 (75)
91 2g6q_A Inhibitor of growth pro 98.2 2.6E-07 8.9E-12 75.7 0.8 51 92-145 7-60 (62)
92 4gne_A Histone-lysine N-methyl 98.2 7.8E-07 2.7E-11 80.4 3.4 47 95-145 14-62 (107)
93 2f42_A STIP1 homology and U-bo 98.1 1.1E-06 3.9E-11 85.7 4.1 49 4-55 104-153 (179)
94 2ea5_A Cell growth regulator w 98.1 1.6E-06 5.3E-11 71.6 4.3 48 3-57 12-60 (68)
95 2jmi_A Protein YNG1, ING1 homo 98.1 8.2E-07 2.8E-11 78.0 2.7 49 93-144 23-75 (90)
96 1wim_A KIAA0161 protein; ring 98.1 7.6E-07 2.6E-11 76.8 2.4 50 4-53 3-62 (94)
97 1vyx_A ORF K3, K3RING; zinc-bi 98.1 1.9E-06 6.7E-11 69.8 4.3 52 1-55 1-59 (60)
98 2yho_A E3 ubiquitin-protein li 98.1 9.7E-07 3.3E-11 74.7 1.5 46 5-57 17-63 (79)
99 2ysm_A Myeloid/lymphoid or mix 98.0 2.3E-06 8E-11 76.5 4.0 48 96-143 7-55 (111)
100 3o70_A PHD finger protein 13; 98.0 2E-06 6.9E-11 71.6 2.4 54 90-145 13-67 (68)
101 3htk_C E3 SUMO-protein ligase 97.9 3.7E-06 1.3E-10 86.6 2.1 50 3-55 178-232 (267)
102 1x4i_A Inhibitor of growth pro 97.8 3.8E-06 1.3E-10 70.3 1.4 48 95-145 5-55 (70)
103 1wew_A DNA-binding family prot 97.8 6.5E-06 2.2E-10 69.9 2.2 55 91-146 11-73 (78)
104 2bay_A PRE-mRNA splicing facto 97.7 1.6E-05 5.3E-10 64.5 2.9 47 6-55 3-50 (61)
105 2lbm_A Transcriptional regulat 97.7 1.1E-05 3.7E-10 76.3 2.0 47 96-145 63-117 (142)
106 1wee_A PHD finger family prote 97.7 1.6E-05 5.3E-10 66.4 2.6 51 95-146 15-67 (72)
107 1wem_A Death associated transc 97.6 4.9E-06 1.7E-10 70.0 -0.9 50 96-146 16-71 (76)
108 2rsd_A E3 SUMO-protein ligase 97.6 1.3E-05 4.3E-10 66.4 1.5 52 94-146 8-66 (68)
109 3k1l_B Fancl; UBC, ring, RWD, 97.6 1.5E-05 5.2E-10 84.9 2.5 52 4-55 306-373 (381)
110 3o7a_A PHD finger protein 13 v 97.6 1.3E-05 4.5E-10 63.0 1.2 47 96-144 4-51 (52)
111 1we9_A PHD finger family prote 97.6 2E-05 6.8E-10 64.0 1.7 51 96-146 6-59 (64)
112 3vk6_A E3 ubiquitin-protein li 97.5 2.1E-05 7.2E-10 70.3 1.5 49 8-58 3-52 (101)
113 1wep_A PHF8; structural genomi 97.4 6.4E-05 2.2E-09 63.7 2.4 50 96-146 12-64 (79)
114 3v43_A Histone acetyltransfera 97.4 2.8E-05 9.4E-10 70.0 0.0 47 97-143 6-62 (112)
115 2kwj_A Zinc finger protein DPF 97.3 3E-05 1E-09 70.0 0.1 47 97-143 2-59 (114)
116 2ri7_A Nucleosome-remodeling f 97.2 3.7E-05 1.3E-09 73.4 -1.1 51 95-146 7-60 (174)
117 3ql9_A Transcriptional regulat 97.2 4.8E-05 1.6E-09 70.8 -0.3 48 96-146 57-112 (129)
118 2vpb_A Hpygo1, pygopus homolog 97.2 3.2E-05 1.1E-09 63.8 -1.6 48 96-143 8-64 (65)
119 2xb1_A Pygopus homolog 2, B-ce 97.2 3.8E-05 1.3E-09 68.8 -1.3 51 97-147 4-63 (105)
120 2kgg_A Histone demethylase jar 97.1 7.9E-05 2.7E-09 58.6 0.3 47 97-143 3-52 (52)
121 3kqi_A GRC5, PHD finger protei 97.0 0.00011 3.7E-09 61.8 0.1 50 96-146 10-62 (75)
122 4gne_A Histone-lysine N-methyl 96.5 0.00093 3.2E-08 60.3 2.2 82 3-139 12-98 (107)
123 3lqh_A Histone-lysine N-methyl 96.1 0.0011 3.8E-08 64.8 0.6 52 97-148 3-66 (183)
124 3nw0_A Non-structural maintena 95.9 0.0039 1.3E-07 63.0 3.3 48 6-55 180-229 (238)
125 2jun_A Midline-1; B-BOX, TRIM, 95.9 0.0047 1.6E-07 53.4 3.3 35 5-39 2-36 (101)
126 3kv5_D JMJC domain-containing 95.4 0.0016 5.3E-08 72.3 -1.6 52 94-146 35-89 (488)
127 3pur_A Lysine-specific demethy 95.2 0.006 2E-07 68.2 2.0 39 108-146 55-95 (528)
128 1wil_A KIAA1045 protein; ring 95.1 0.011 3.8E-07 51.4 2.9 49 96-145 15-76 (89)
129 3kv4_A PHD finger protein 8; e 94.7 0.0026 8.9E-08 69.9 -2.4 49 97-146 6-57 (447)
130 2lri_C Autoimmune regulator; Z 92.8 0.049 1.7E-06 45.0 2.4 44 6-52 12-59 (66)
131 4bbq_A Lysine-specific demethy 92.3 0.046 1.6E-06 48.8 1.8 38 108-145 72-114 (117)
132 2k16_A Transcription initiatio 91.9 0.026 8.8E-07 46.9 -0.3 51 4-54 16-70 (75)
133 2ko5_A Ring finger protein Z; 91.6 0.062 2.1E-06 47.6 1.7 50 4-57 26-75 (99)
134 2l5u_A Chromodomain-helicase-D 91.2 0.059 2E-06 43.5 1.0 48 2-52 7-58 (61)
135 1f62_A Transcription factor WS 90.4 0.08 2.7E-06 40.8 1.1 44 8-51 2-49 (51)
136 2ku7_A MLL1 PHD3-CYP33 RRM chi 89.6 0.11 3.7E-06 46.1 1.5 36 111-146 2-45 (140)
137 1mm2_A MI2-beta; PHD, zinc fin 88.8 0.074 2.5E-06 42.9 -0.2 47 3-52 6-56 (61)
138 1we9_A PHD finger family prote 88.0 0.051 1.7E-06 43.8 -1.7 51 2-52 2-58 (64)
139 2lbm_A Transcriptional regulat 87.2 0.33 1.1E-05 45.8 3.1 46 3-51 60-116 (142)
140 3o36_A Transcription intermedi 87.1 0.12 4E-06 49.7 0.0 46 4-52 2-51 (184)
141 1xwh_A Autoimmune regulator; P 87.1 0.055 1.9E-06 44.2 -2.0 47 2-51 4-54 (66)
142 3u5n_A E3 ubiquitin-protein li 86.7 0.1 3.5E-06 51.1 -0.6 47 3-52 4-54 (207)
143 2e6r_A Jumonji/ARID domain-con 86.3 0.059 2E-06 47.0 -2.3 50 3-52 13-66 (92)
144 2l43_A N-teminal domain from h 85.8 0.11 3.6E-06 45.1 -1.0 49 4-52 23-75 (88)
145 2yql_A PHD finger protein 21A; 85.5 0.061 2.1E-06 42.5 -2.4 46 3-51 6-55 (56)
146 1fp0_A KAP-1 corepressor; PHD 85.4 0.19 6.5E-06 43.9 0.4 46 4-52 23-72 (88)
147 2ku3_A Bromodomain-containing 85.2 0.11 3.8E-06 43.4 -1.1 50 3-52 13-66 (71)
148 2lv9_A Histone-lysine N-methyl 85.1 0.18 6E-06 44.4 0.1 46 6-52 28-76 (98)
149 1weo_A Cellulose synthase, cat 84.8 1.3 4.4E-05 39.0 5.3 55 3-57 13-72 (93)
150 3ql9_A Transcriptional regulat 84.4 0.48 1.7E-05 44.0 2.7 45 4-51 55-110 (129)
151 2yt5_A Metal-response element- 82.6 0.12 4.2E-06 41.7 -1.9 50 3-52 3-61 (66)
152 2ect_A Ring finger protein 126 82.3 1.1 3.9E-05 36.2 3.9 48 96-146 15-62 (78)
153 1weu_A Inhibitor of growth fam 81.5 0.35 1.2E-05 42.4 0.5 46 5-52 35-85 (91)
154 2puy_A PHD finger protein 21A; 80.8 0.18 6E-06 40.3 -1.5 46 4-52 3-52 (60)
155 1wep_A PHF8; structural genomi 80.6 0.73 2.5E-05 38.7 2.1 50 3-53 9-64 (79)
156 2ro1_A Transcription intermedi 79.3 0.39 1.3E-05 46.7 0.0 44 6-52 2-49 (189)
157 1iym_A EL5; ring-H2 finger, ub 78.4 1.1 3.7E-05 33.8 2.3 46 97-145 6-52 (55)
158 3lqh_A Histone-lysine N-methyl 78.2 0.58 2E-05 45.7 0.9 48 7-54 3-65 (183)
159 2vpb_A Hpygo1, pygopus homolog 77.8 0.32 1.1E-05 39.9 -0.9 47 4-50 6-64 (65)
160 1wem_A Death associated transc 77.5 0.45 1.5E-05 39.6 -0.1 46 6-52 16-70 (76)
161 2cs3_A Protein C14ORF4, MY039 76.4 2.6 9.1E-05 36.5 4.3 47 4-50 13-65 (93)
162 2kiz_A E3 ubiquitin-protein li 75.4 0.72 2.4E-05 36.6 0.6 48 96-146 14-61 (69)
163 1wen_A Inhibitor of growth fam 75.2 0.51 1.8E-05 39.3 -0.3 47 4-52 14-65 (71)
164 3asl_A E3 ubiquitin-protein li 74.1 0.49 1.7E-05 39.2 -0.7 45 8-52 20-69 (70)
165 3rsn_A SET1/ASH2 histone methy 73.8 2.3 7.8E-05 41.5 3.7 50 98-148 7-62 (177)
166 2xb1_A Pygopus homolog 2, B-ce 73.7 0.32 1.1E-05 43.3 -2.1 47 7-53 4-62 (105)
167 3shb_A E3 ubiquitin-protein li 73.7 0.4 1.4E-05 40.6 -1.4 44 8-51 28-76 (77)
168 2ysl_A Tripartite motif-contai 73.5 1.5 5E-05 35.0 2.0 48 96-146 20-67 (73)
169 1x4j_A Ring finger protein 38; 73.5 0.51 1.7E-05 38.2 -0.8 48 96-146 23-70 (75)
170 1wil_A KIAA1045 protein; ring 73.3 2.4 8.2E-05 37.0 3.3 47 5-52 14-76 (89)
171 2e6s_A E3 ubiquitin-protein li 73.2 0.45 1.5E-05 40.3 -1.2 45 7-51 27-76 (77)
172 3a1b_A DNA (cytosine-5)-methyl 72.4 0.71 2.4E-05 44.4 -0.2 48 96-146 79-135 (159)
173 1wew_A DNA-binding family prot 71.7 0.49 1.7E-05 39.8 -1.3 47 5-52 15-72 (78)
174 1wev_A Riken cDNA 1110020M19; 71.1 0.31 1E-05 42.1 -2.8 49 6-54 16-74 (88)
175 3o70_A PHD finger protein 13; 69.2 0.48 1.7E-05 39.1 -1.8 47 4-51 17-66 (68)
176 2ri7_A Nucleosome-remodeling f 68.6 0.82 2.8E-05 43.2 -0.7 48 4-52 6-59 (174)
177 2d8t_A Dactylidin, ring finger 68.2 2.6 9E-05 33.6 2.4 46 95-146 14-59 (71)
178 2ep4_A Ring finger protein 24; 68.0 1.5 5.2E-05 35.1 0.9 48 96-146 15-62 (74)
179 2l0b_A E3 ubiquitin-protein li 65.1 1.2 4E-05 37.8 -0.4 47 96-145 40-86 (91)
180 2ecj_A Tripartite motif-contai 64.6 4.1 0.00014 30.7 2.7 45 95-142 14-58 (58)
181 2pv0_B DNA (cytosine-5)-methyl 64.5 2.8 9.4E-05 45.4 2.3 48 96-146 93-149 (386)
182 2jmi_A Protein YNG1, ING1 homo 64.3 0.57 1.9E-05 41.0 -2.5 46 4-51 24-75 (90)
183 1v87_A Deltex protein 2; ring- 64.1 2.1 7.1E-05 37.2 1.1 34 114-147 58-93 (114)
184 2d8s_A Cellular modulator of i 62.9 4.7 0.00016 33.9 3.0 50 96-146 15-68 (80)
185 2ecy_A TNF receptor-associated 62.6 3.4 0.00012 32.4 2.0 47 95-146 14-60 (66)
186 1bor_A Transcription factor PM 62.5 11 0.00037 28.9 4.8 42 96-146 6-47 (56)
187 2rsd_A E3 SUMO-protein ligase 62.4 0.5 1.7E-05 38.7 -3.0 47 4-51 8-64 (68)
188 2egp_A Tripartite motif-contai 61.8 6.3 0.00021 31.6 3.5 48 96-146 12-63 (79)
189 3c6w_A P28ING5, inhibitor of g 61.7 0.58 2E-05 37.6 -2.7 46 4-51 7-57 (59)
190 2ct0_A Non-SMC element 1 homol 60.4 2.8 9.4E-05 35.2 1.1 45 97-145 16-61 (74)
191 1weq_A PHD finger protein 7; s 60.4 7.3 0.00025 33.8 3.8 35 109-145 44-79 (85)
192 2pv0_B DNA (cytosine-5)-methyl 57.7 6.4 0.00022 42.6 3.6 46 4-52 91-148 (386)
193 2kgg_A Histone demethylase jar 57.6 5.8 0.0002 30.6 2.5 43 8-50 4-52 (52)
194 2vnf_A ING 4, P29ING4, inhibit 57.4 0.74 2.5E-05 37.0 -2.8 45 5-51 9-58 (60)
195 3a1b_A DNA (cytosine-5)-methyl 57.1 5.3 0.00018 38.3 2.6 45 4-51 77-133 (159)
196 2g6q_A Inhibitor of growth pro 56.5 0.81 2.8E-05 37.1 -2.7 45 5-51 10-59 (62)
197 3l11_A E3 ubiquitin-protein li 56.5 5.7 0.00019 34.6 2.5 46 96-146 15-60 (115)
198 1wee_A PHD finger family prote 55.8 0.9 3.1E-05 37.5 -2.6 47 5-52 15-66 (72)
199 1e4u_A Transcriptional repress 55.6 7.3 0.00025 32.5 2.9 50 96-148 11-62 (78)
200 2ecv_A Tripartite motif-contai 53.9 4.9 0.00017 32.3 1.6 49 96-147 19-70 (85)
201 2ecl_A Ring-box protein 2; RNF 53.8 3.7 0.00013 34.0 0.8 29 115-146 46-74 (81)
202 2ecm_A Ring finger and CHY zin 53.4 2.2 7.6E-05 31.9 -0.5 46 97-145 6-52 (55)
203 2djb_A Polycomb group ring fin 52.9 7.8 0.00027 30.9 2.6 47 95-146 14-60 (72)
204 2csy_A Zinc finger protein 183 52.5 2.6 8.9E-05 34.5 -0.3 46 95-146 14-59 (81)
205 1jm7_A BRCA1, breast cancer ty 52.0 3.7 0.00013 35.2 0.5 47 97-146 22-68 (112)
206 2ysj_A Tripartite motif-contai 51.5 3 0.0001 32.4 -0.1 45 95-142 19-63 (63)
207 1vyx_A ORF K3, K3RING; zinc-bi 51.3 1.8 6.1E-05 34.6 -1.5 48 96-145 6-56 (60)
208 2ecw_A Tripartite motif-contai 49.8 9.3 0.00032 30.7 2.6 48 96-146 19-69 (85)
209 2ct2_A Tripartite motif protei 49.3 5.8 0.0002 32.4 1.3 51 96-146 15-66 (88)
210 2ecn_A Ring finger protein 141 49.2 5.5 0.00019 31.4 1.1 44 96-146 15-58 (70)
211 1z60_A TFIIH basal transcripti 48.8 6.3 0.00021 32.0 1.4 43 7-49 16-58 (59)
212 3k1l_B Fancl; UBC, ring, RWD, 48.7 7.1 0.00024 42.0 2.2 32 96-127 308-344 (381)
213 1weo_A Cellulose synthase, cat 48.4 5.1 0.00017 35.2 0.8 52 95-148 15-70 (93)
214 4ayc_A E3 ubiquitin-protein li 46.3 4.6 0.00016 36.6 0.3 43 97-145 54-96 (138)
215 3kqi_A GRC5, PHD finger protei 46.0 2.7 9.1E-05 34.9 -1.3 47 5-52 9-61 (75)
216 3ztg_A E3 ubiquitin-protein li 45.3 3.6 0.00012 34.2 -0.6 48 95-145 12-59 (92)
217 1t1h_A Gspef-atpub14, armadill 39.1 8.2 0.00028 31.0 0.7 47 95-146 7-53 (78)
218 2yur_A Retinoblastoma-binding 38.5 9 0.00031 30.8 0.8 48 95-145 14-61 (74)
219 3ng2_A RNF4, snurf, ring finge 38.4 3.4 0.00012 32.5 -1.7 48 96-146 10-61 (71)
220 3m62_A Ubiquitin conjugation f 38.1 18 0.00063 43.3 3.6 48 5-55 890-938 (968)
221 3kv5_D JMJC domain-containing 37.2 5.2 0.00018 44.4 -1.1 47 5-52 36-88 (488)
222 3dpl_R Ring-box protein 1; ubi 36.6 8.3 0.00028 34.1 0.3 28 115-145 71-98 (106)
223 4a0k_B E3 ubiquitin-protein li 36.3 8.4 0.00029 34.9 0.3 28 115-145 82-109 (117)
224 2y43_A E3 ubiquitin-protein li 35.7 6.1 0.00021 33.4 -0.7 46 96-146 22-67 (99)
225 3fl2_A E3 ubiquitin-protein li 35.4 6.7 0.00023 34.6 -0.5 46 96-146 52-97 (124)
226 2vje_B MDM4 protein; proto-onc 33.0 6.6 0.00023 31.1 -0.8 46 97-146 8-54 (63)
227 3i2d_A E3 SUMO-protein ligase 32.8 27 0.00092 37.6 3.6 48 6-55 249-300 (371)
228 1jm7_B BARD1, BRCA1-associated 32.6 30 0.001 30.1 3.3 44 96-146 22-65 (117)
229 4bbq_A Lysine-specific demethy 32.3 11 0.00037 33.3 0.4 37 97-146 8-44 (117)
230 2ckl_B Ubiquitin ligase protei 30.5 8.7 0.0003 35.6 -0.6 48 95-146 53-100 (165)
231 3lrq_A E3 ubiquitin-protein li 29.6 6.5 0.00022 33.7 -1.5 47 96-146 22-68 (100)
232 1z2q_A LM5-1; membrane protein 29.3 29 0.001 29.2 2.6 36 2-37 17-53 (84)
233 2jmo_A Parkin; IBR, E3 ligase, 28.8 4.7 0.00016 33.9 -2.5 35 7-41 26-70 (80)
234 3nw0_A Non-structural maintena 28.1 18 0.00063 36.2 1.3 47 96-145 180-226 (238)
235 2ffw_A Midline-1; B-BOX, ring 28.0 19 0.00064 30.1 1.1 34 96-129 30-64 (78)
236 2ea5_A Cell growth regulator w 28.0 44 0.0015 26.8 3.3 42 96-147 15-57 (68)
237 3t7l_A Zinc finger FYVE domain 27.9 28 0.00097 29.8 2.3 34 5-38 19-53 (90)
238 2yw8_A RUN and FYVE domain-con 27.9 29 0.00098 29.1 2.2 35 3-37 16-51 (82)
239 1joc_A EEA1, early endosomal a 27.8 28 0.00094 31.7 2.3 33 5-37 68-101 (125)
240 2jun_A Midline-1; B-BOX, TRIM, 27.5 18 0.00063 30.6 1.0 32 97-128 4-35 (101)
241 4rxn_A Rubredoxin; electron tr 27.5 31 0.0011 27.4 2.2 15 131-146 32-46 (54)
242 4fo9_A E3 SUMO-protein ligase 26.9 38 0.0013 36.3 3.5 48 6-55 215-266 (360)
243 4b2u_A S67; toxin, ICK; NMR {S 26.9 17 0.00059 26.1 0.5 23 123-145 2-27 (36)
244 1x4u_A Zinc finger, FYVE domai 26.8 31 0.0011 29.0 2.2 35 2-36 10-45 (84)
245 2a7o_A Huntingtin interacting 26.2 76 0.0026 28.8 4.7 42 566-607 20-66 (112)
246 2zet_C Melanophilin; complex, 26.2 29 0.00098 32.9 2.1 47 5-52 67-117 (153)
247 4ic3_A E3 ubiquitin-protein li 25.2 26 0.00087 28.3 1.4 41 96-146 24-65 (74)
248 2ckl_A Polycomb group ring fin 24.9 14 0.00049 31.7 -0.2 46 96-146 15-60 (108)
249 1vfy_A Phosphatidylinositol-3- 24.2 38 0.0013 27.7 2.3 33 5-37 10-43 (73)
250 2yho_A E3 ubiquitin-protein li 24.2 32 0.0011 28.4 1.8 41 97-147 19-60 (79)
251 3kv4_A PHD finger protein 8; e 24.0 13 0.00044 40.9 -0.8 45 7-52 6-56 (447)
252 1e8j_A Rubredoxin; iron-sulfur 24.0 62 0.0021 25.3 3.3 15 131-146 32-46 (52)
253 2d8v_A Zinc finger FYVE domain 23.4 38 0.0013 28.2 2.1 34 3-40 5-39 (67)
254 2kn9_A Rubredoxin; metalloprot 22.5 47 0.0016 28.5 2.6 16 131-147 56-71 (81)
255 1z6u_A NP95-like ring finger p 22.5 15 0.00052 34.0 -0.6 46 96-146 78-123 (150)
256 1dx8_A Rubredoxin; electron tr 21.8 58 0.002 27.1 2.9 15 132-147 37-51 (70)
257 2v3b_B Rubredoxin 2, rubredoxi 21.1 56 0.0019 25.9 2.6 13 135-147 35-47 (55)
258 3zyq_A Hepatocyte growth facto 21.0 37 0.0013 33.5 1.9 32 5-36 163-195 (226)
259 2k1p_A Zinc finger RAN-binding 20.5 37 0.0013 24.1 1.3 13 133-145 3-15 (33)
260 3hct_A TNF receptor-associated 20.4 37 0.0013 29.6 1.6 46 95-145 17-62 (118)
261 1zbd_B Rabphilin-3A; G protein 20.2 33 0.0011 31.7 1.2 33 4-36 53-87 (134)
No 1
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.30 E-value=4.9e-13 Score=120.01 Aligned_cols=97 Identities=25% Similarity=0.623 Sum_probs=75.6
Q ss_pred CCCCcccccccccccccCCCcEeccCCCccCHhHHHHHHH----hcCCCCCCccccccccCCCCCCCCCcceeeeecccc
Q 005857 2 EGLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAK----IESKCPMCKRRFTSIRRPPKDGVFPRERFVVVPKRD 77 (673)
Q Consensus 2 e~~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk----~k~sCPlCRkeFt~I~~~~vdG~f~nErLv~VpeRd 77 (673)
.+.+++.|.||.+..+..+....+.|...||..|+..... ..+.||.|
T Consensus 3 ~~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C---------------------------- 54 (111)
T 2ysm_A 3 SGSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPEC---------------------------- 54 (111)
T ss_dssp CCCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTT----------------------------
T ss_pred CCCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcC----------------------------
Confidence 3567899999998663334467788999999999865321 12333333
Q ss_pred cccccccccccCCCCcccccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCc
Q 005857 78 QIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVL 145 (673)
Q Consensus 78 QvyepseEEs~~eeDp~e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~ 145 (673)
..|.+|+..+++..+++|+.|+++||++||+|+ ..+|.++|||+.|...
T Consensus 55 -------------------~~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c 104 (111)
T 2ysm_A 55 -------------------KVCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRIC 104 (111)
T ss_dssp -------------------CCCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCC
T ss_pred -------------------CcccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCc
Confidence 268899988877889999999999999999987 7899999999999764
No 2
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.25 E-value=1e-11 Score=112.18 Aligned_cols=92 Identities=24% Similarity=0.553 Sum_probs=73.5
Q ss_pred ccccccccccc------ccCCCcEeccCCCccCHhHHHHH-------HHhcCCCCCCccccccccCCCCCCCCCcceeee
Q 005857 6 SRSCGICLMDE------GKSIRGQIDSCDHYFCFVCIMEW-------AKIESKCPMCKRRFTSIRRPPKDGVFPRERFVV 72 (673)
Q Consensus 6 d~~CpICLE~f------~~~~~~~Ld~CgH~FC~~CI~eW-------sk~k~sCPlCRkeFt~I~~~~vdG~f~nErLv~ 72 (673)
...|.+|+..- ...+....+.|+..||..|+..+ .+..+.||.|+
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~---------------------- 62 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK---------------------- 62 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC----------------------
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC----------------------
Confidence 56899999753 12356677889999999999531 13367888886
Q ss_pred ecccccccccccccccCCCCcccccccccccCC-CCccccccccccccccccccccCC-CCCCCCCccCcCCCC
Q 005857 73 VPKRDQIYGGFGIASSRTADPYAYVRCNVCQGT-TYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTV 144 (673)
Q Consensus 73 VpeRdQvyepseEEs~~eeDp~e~~~CsVC~~~-d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~ 144 (673)
.|.+|+.. .+++.+++|+.|+++||++||+|+ ..+|+++|||+.|+.
T Consensus 63 -------------------------~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 -------------------------TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp -------------------------CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred -------------------------ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 48889875 345689999999999999999987 789999999999975
No 3
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.22 E-value=3.8e-12 Score=115.35 Aligned_cols=92 Identities=29% Similarity=0.621 Sum_probs=73.0
Q ss_pred ccccccccccc-------cCCCcEeccCCCccCHhHHHHHH-------HhcCCCCCCccccccccCCCCCCCCCcceeee
Q 005857 7 RSCGICLMDEG-------KSIRGQIDSCDHYFCFVCIMEWA-------KIESKCPMCKRRFTSIRRPPKDGVFPRERFVV 72 (673)
Q Consensus 7 ~~CpICLE~f~-------~~~~~~Ld~CgH~FC~~CI~eWs-------k~k~sCPlCRkeFt~I~~~~vdG~f~nErLv~ 72 (673)
+.|.||+.... ..+....+.|...||..|+..+. +..+.||.|+
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~---------------------- 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK---------------------- 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC----------------------
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC----------------------
Confidence 67999997541 12556677899999999986432 2256676663
Q ss_pred ecccccccccccccccCCCCcccccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCc
Q 005857 73 VPKRDQIYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVL 145 (673)
Q Consensus 73 VpeRdQvyepseEEs~~eeDp~e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~ 145 (673)
.|.+|+..++.+.||+||.|+++||++||+|+ ..+|+++|||+.|...
T Consensus 60 -------------------------~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 60 -------------------------SCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp -------------------------CCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred -------------------------ccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 48889888777889999999999999999987 7899999999999754
No 4
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.12 E-value=9.3e-12 Score=111.51 Aligned_cols=112 Identities=21% Similarity=0.437 Sum_probs=77.1
Q ss_pred CCcccccccccccccC----CCcEeccCCCccCHhHHHHHHHhcCCCCCCccccccccCCCCCCCCCcceeeeecccccc
Q 005857 4 LHSRSCGICLMDEGKS----IRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIRRPPKDGVFPRERFVVVPKRDQI 79 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~----~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~I~~~~vdG~f~nErLv~VpeRdQv 79 (673)
.++.+|+||++.|.+. ...+.++|+|.||..||.+|++....||+||+.+..... ..+
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l------------~~l------ 66 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY------------HPI------ 66 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTCE------------EEC------
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCccccc------------ccc------
Confidence 4678999999998542 223778999999999999999988999999998754321 000
Q ss_pred cccccccccCCCCcccccccccccCCCCc----cccccccccccccccccccCCCCCCCCCccCcCCCCccc
Q 005857 80 YGGFGIASSRTADPYAYVRCNVCQGTTYE----SLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLRD 147 (673)
Q Consensus 80 yepseEEs~~eeDp~e~~~CsVC~~~d~e----e~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~~ 147 (673)
+. ..+...|.+|...-.+ ........|+..||..|+..-. .....||.|+..-.
T Consensus 67 ~i-----------~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~---~~~~~CP~Cr~~~~ 124 (133)
T 4ap4_A 67 YI-----------GSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL---KNANTCPTCRKKIN 124 (133)
T ss_dssp BC-----------SSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHH---HHCSBCTTTCCBCC
T ss_pred cc-----------CCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHH---HcCCCCCCCCCcCC
Confidence 00 0112569999865322 1223456899999999997420 12358999997643
No 5
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=9.7e-11 Score=96.37 Aligned_cols=55 Identities=24% Similarity=0.559 Sum_probs=46.7
Q ss_pred CCCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccccc
Q 005857 3 GLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~I~ 57 (673)
..++..|+||++.|........++|+|.||..||.+|++....||+||+.+..+.
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2ep4_A 12 LNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLA 66 (74)
T ss_dssp CCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSCC
T ss_pred CCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCccccccc
Confidence 3456799999999976555666689999999999999998889999999887655
No 6
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.04 E-value=1.4e-10 Score=94.18 Aligned_cols=54 Identities=26% Similarity=0.547 Sum_probs=45.9
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~I~ 57 (673)
.++..|+||++.|........++|+|.||..||..|++....||+||+.+....
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQL 65 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSCC
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCcC
Confidence 455789999999865556777899999999999999998889999999876543
No 7
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.04 E-value=9.8e-11 Score=90.93 Aligned_cols=51 Identities=24% Similarity=0.610 Sum_probs=43.4
Q ss_pred CCcccccccccccccCCCcEecc-CCCccCHhHHHHHHHhcCCCCCCccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDS-CDHYFCFVCIMEWAKIESKCPMCKRRFT 54 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~-CgH~FC~~CI~eWsk~k~sCPlCRkeFt 54 (673)
.++.+|+||++.+........++ |+|.||..||.+|.+....||+||+.+.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 45689999999997655556665 9999999999999998899999998764
No 8
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.02 E-value=1.1e-10 Score=96.51 Aligned_cols=52 Identities=23% Similarity=0.593 Sum_probs=44.5
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
.++..|+||++.|........++|+|.||..||..|++....||+||+.+..
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCC
Confidence 4567899999999665555677899999999999999988999999988653
No 9
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.01 E-value=2e-10 Score=95.34 Aligned_cols=54 Identities=24% Similarity=0.589 Sum_probs=45.8
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~I~ 57 (673)
.++..|+||++.|........++|+|.||..||.+|++....||+||+.+....
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQN 66 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCcc
Confidence 456799999999965555567789999999999999988899999999877544
No 10
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.99 E-value=1.5e-10 Score=90.58 Aligned_cols=48 Identities=38% Similarity=0.967 Sum_probs=43.4
Q ss_pred ccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCc
Q 005857 98 RCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVL 145 (673)
Q Consensus 98 ~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~ 145 (673)
.|.+|+..++++.|++||.|+++||++|++|+ ..+|.++|||+.|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 58999988877889999999999999999987 7899999999999753
No 11
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.97 E-value=2e-10 Score=99.15 Aligned_cols=52 Identities=27% Similarity=0.609 Sum_probs=44.5
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
.++..|+||++.|........++|+|.||..||..|++....||+||+.+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCCC
Confidence 4567899999999765556677899999999999999988999999988653
No 12
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.97 E-value=4.4e-10 Score=99.67 Aligned_cols=54 Identities=22% Similarity=0.587 Sum_probs=42.7
Q ss_pred CCcccccccccccccC---------------CCcEeccCCCccCHhHHHHHHH-----hcCCCCCCcccccccc
Q 005857 4 LHSRSCGICLMDEGKS---------------IRGQIDSCDHYFCFVCIMEWAK-----IESKCPMCKRRFTSIR 57 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~---------------~~~~Ld~CgH~FC~~CI~eWsk-----~k~sCPlCRkeFt~I~ 57 (673)
..+..|+|||+.|... ....+++|+|.||..||..|+. ....||+||+.|....
T Consensus 23 ~~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~~ 96 (114)
T 1v87_A 23 APEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKT 96 (114)
T ss_dssp CCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCS
T ss_pred CCCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCCC
Confidence 3457999999998532 1334789999999999999994 3568999999987654
No 13
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.96 E-value=3.9e-10 Score=87.36 Aligned_cols=51 Identities=27% Similarity=0.557 Sum_probs=43.4
Q ss_pred CCccccccccccccc-CCCcEeccCCCccCHhHHHHHHHhcCCCCCCccccc
Q 005857 4 LHSRSCGICLMDEGK-SIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFT 54 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~-~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt 54 (673)
.++..|+||++.+.+ .....+++|+|.||..||.+|.+....||+||+.+.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 457899999999843 345678899999999999999988899999998764
No 14
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.95 E-value=3.9e-10 Score=91.54 Aligned_cols=53 Identities=25% Similarity=0.561 Sum_probs=44.7
Q ss_pred CCCcccccccccccccC----CCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 3 GLHSRSCGICLMDEGKS----IRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~----~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
..++..|+||++.+.+. ....+++|+|.||..||.+|++....||+||+.+..
T Consensus 7 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 7 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 63 (71)
T ss_dssp CTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCC
T ss_pred CCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccCh
Confidence 45678999999998542 334788999999999999999988999999998764
No 15
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=3.4e-10 Score=91.06 Aligned_cols=51 Identities=25% Similarity=0.595 Sum_probs=43.0
Q ss_pred CCcccccccccccccC----CCcEeccCCCccCHhHHHHHHHhcCCCCCCccccc
Q 005857 4 LHSRSCGICLMDEGKS----IRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFT 54 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~----~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt 54 (673)
.++..|+||++.+.+. ....+++|+|.||..||.+|++....||+||+.+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 4567899999998542 22377899999999999999998899999998865
No 16
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.95 E-value=6.1e-10 Score=89.98 Aligned_cols=52 Identities=35% Similarity=0.834 Sum_probs=43.9
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~I~ 57 (673)
.++..|+||++.+.+ ....++|+|.||..||..|.+....||+||+.+..+.
T Consensus 3 ~~~~~C~IC~~~~~~--~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 54 (68)
T 1chc_A 3 TVAERCPICLEDPSN--YSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESVV 54 (68)
T ss_dssp CCCCCCSSCCSCCCS--CEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCEE
T ss_pred CCCCCCeeCCccccC--CcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHhhh
Confidence 356799999998843 2477889999999999999998899999999887554
No 17
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=8.4e-10 Score=90.72 Aligned_cols=52 Identities=25% Similarity=0.473 Sum_probs=42.6
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~I~ 57 (673)
.++..|+||++.+.+ ...+.+|+|.||..||..|.+....||+||+.+....
T Consensus 13 ~~~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~ 64 (72)
T 2djb_A 13 TPYILCSICKGYLID--ATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQ 64 (72)
T ss_dssp CGGGSCTTTSSCCSS--CEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSC
T ss_pred CCCCCCCCCChHHHC--cCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCccc
Confidence 456799999999854 2334489999999999999988899999999876533
No 18
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.90 E-value=6e-10 Score=94.38 Aligned_cols=53 Identities=23% Similarity=0.652 Sum_probs=42.8
Q ss_pred CCCccccccccccccc-----------CC-CcEeccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 3 GLHSRSCGICLMDEGK-----------SI-RGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~-----------~~-~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
..+++.|+||++.|.+ .. ...+..|+|.||..||.+|++....||+||+.+..
T Consensus 12 ~~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~ 76 (81)
T 2ecl_A 12 DVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVV 76 (81)
T ss_dssp SCCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCE
T ss_pred cCCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcch
Confidence 3567889999999843 12 33555699999999999999998999999998764
No 19
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.90 E-value=4.1e-10 Score=92.37 Aligned_cols=51 Identities=24% Similarity=0.656 Sum_probs=43.2
Q ss_pred CCCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCccccccc
Q 005857 3 GLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~I 56 (673)
..++..|+||++.+.+ ++.++|+|.||..||..|......||+||+.+...
T Consensus 12 ~~~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 12 SLTVPECAICLQTCVH---PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPED 62 (71)
T ss_dssp SSSCCBCSSSSSBCSS---EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHH
T ss_pred CCCCCCCccCCcccCC---CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHh
Confidence 4566899999998844 56668999999999999998888999999987643
No 20
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=1.1e-09 Score=92.21 Aligned_cols=52 Identities=19% Similarity=0.487 Sum_probs=43.4
Q ss_pred CCcccccccccccccCCC-cEeccCCCccCHhHHHHHHHhc---CCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIR-GQIDSCDHYFCFVCIMEWAKIE---SKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~-~~Ld~CgH~FC~~CI~eWsk~k---~sCPlCRkeFt~ 55 (673)
.+...|+||++.|.+... +++++|+|.||..||..|.+.. ..||+||+.+..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred cCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 456789999999965332 6778999999999999999875 789999998654
No 21
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.89 E-value=5.4e-10 Score=98.11 Aligned_cols=52 Identities=31% Similarity=0.736 Sum_probs=46.3
Q ss_pred ccccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCc
Q 005857 94 YAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVL 145 (673)
Q Consensus 94 ~e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~ 145 (673)
.+...|.+|+..++.+.||+||.|+.+||++||+|+ ..+|.++|||+.|...
T Consensus 14 ~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 14 IDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred cCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 345679999998877889999999999999999987 7899999999999764
No 22
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.88 E-value=1.5e-09 Score=89.88 Aligned_cols=49 Identities=22% Similarity=0.404 Sum_probs=41.0
Q ss_pred CCcccccccccccccCCCcEecc-CCCccCHhHHHHHHHhc--CCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDS-CDHYFCFVCIMEWAKIE--SKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~-CgH~FC~~CI~eWsk~k--~sCPlCRkeFt~ 55 (673)
.++..|+||++.|.+ ++.++ |+|.||..||..|++.. ..||+||+.+..
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~ 64 (74)
T 2yur_A 13 PDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVS 64 (74)
T ss_dssp CGGGSCSSSCCCCTT---CEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCC
T ss_pred CCCCCCcCCChHHhC---CeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCC
Confidence 456799999999954 56677 99999999999999765 689999997543
No 23
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.88 E-value=6.3e-10 Score=88.19 Aligned_cols=51 Identities=25% Similarity=0.592 Sum_probs=43.0
Q ss_pred CcccccccccccccC----CCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 5 HSRSCGICLMDEGKS----IRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE~f~~~----~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
++..|+||++.+.+. ....+++|+|.||..||.+|.+....||+||+.+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCc
Confidence 568999999998542 234778999999999999999988899999988664
No 24
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.88 E-value=1.5e-09 Score=88.45 Aligned_cols=49 Identities=33% Similarity=0.829 Sum_probs=42.4
Q ss_pred cccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCcc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~~ 146 (673)
+...|.+|+.. +.|++||.|+++||++|++|+ ..+|.++|||+.|....
T Consensus 8 ~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 57 (61)
T 1mm2_A 8 HMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPA 57 (61)
T ss_dssp SCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTC
T ss_pred CCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCch
Confidence 34679999875 369999999999999999987 78999999999998653
No 25
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.87 E-value=1e-09 Score=92.02 Aligned_cols=48 Identities=25% Similarity=0.584 Sum_probs=41.9
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFT 54 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt 54 (673)
.+...|+||++.+.+ +++++|+|.||..||..|.+....||+||+.+.
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 13 EIPFRCFICRQAFQN---PVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCSBCSSSCSBCCS---EEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCCcCCCchhcC---eeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 345789999999854 567899999999999999998889999999875
No 26
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.87 E-value=6.6e-10 Score=91.69 Aligned_cols=51 Identities=29% Similarity=0.690 Sum_probs=43.7
Q ss_pred ccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCccccC
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLRDEH 149 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~~~e~ 149 (673)
...|.+|+.. +.|++||.|+.+||++||+|+ ..+|.++|||+.|...+...
T Consensus 8 ~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~~~ 59 (66)
T 1xwh_A 8 EDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQE 59 (66)
T ss_dssp CCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCCCC
T ss_pred CCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccccc
Confidence 4679999876 369999999999999999987 78999999999998765443
No 27
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.87 E-value=4.6e-10 Score=103.63 Aligned_cols=49 Identities=33% Similarity=0.709 Sum_probs=42.3
Q ss_pred CcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCccccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSI 56 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~I 56 (673)
++..|+||++.|.+ +++++|+|.||..||..|++....||+||+.+...
T Consensus 52 ~~~~C~iC~~~~~~---~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 52 NELQCIICSEYFIE---AVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSK 100 (138)
T ss_dssp HHSBCTTTCSBCSS---EEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCCE
T ss_pred ccCCCcccCcccCC---ceECCCCCCccHHHHHHHHHcCCcCCCCCCcCCCC
Confidence 35689999999854 67779999999999999999889999999987543
No 28
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=1.3e-09 Score=89.04 Aligned_cols=49 Identities=33% Similarity=0.612 Sum_probs=40.9
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHH---hcCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAK---IESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk---~k~sCPlCRkeFt~ 55 (673)
.++..|+||++.+.+ ++.++|+|.||..||..|.+ ....||+||+.+..
T Consensus 18 ~~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 18 QEEVICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCBCTTTCSBCSS---EEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred ccCCEeccCCcccCC---eEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 456799999998854 56669999999999999986 35689999998764
No 29
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.83 E-value=1.6e-09 Score=89.93 Aligned_cols=48 Identities=29% Similarity=0.500 Sum_probs=41.5
Q ss_pred cccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVL 145 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~ 145 (673)
....|.+|++.+ .||+||.|+++||++||.|+ ..+|.++|||+.|...
T Consensus 11 ~~~~C~vC~~~~---~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 11 PGARCGVCGDGT---DVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp TTCCCTTTSCCT---TCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCCcCCCCCCC---eEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 346799998653 58999999999999999987 7899999999999753
No 30
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.82 E-value=1.3e-09 Score=95.53 Aligned_cols=48 Identities=25% Similarity=0.752 Sum_probs=41.5
Q ss_pred CcccccccccccccCCCcEe-ccCCCccCHhHHHHHHHhc-CCCCCCcccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQI-DSCDHYFCFVCIMEWAKIE-SKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~L-d~CgH~FC~~CI~eWsk~k-~sCPlCRkeFt~ 55 (673)
++..|+||++.|.+ ++. ++|+|.||..||..|.+.. ..||+||+.+..
T Consensus 21 ~~~~C~IC~~~~~~---p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 21 EVFRCFICMEKLRD---ARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 70 (100)
T ss_dssp HHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCccCCccccC---ccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCH
Confidence 46789999999954 555 8999999999999999887 699999999754
No 31
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=98.82 E-value=7.2e-10 Score=93.19 Aligned_cols=50 Identities=32% Similarity=0.923 Sum_probs=43.9
Q ss_pred cccccccccCCC--CccccccccccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 95 AYVRCNVCQGTT--YESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 95 e~~~CsVC~~~d--~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
+...|.+|+..+ +++.+++||.|+.+||++|++|+ .+|+|+|||+.|...
T Consensus 15 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~-~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 15 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVP-YIPEGQWLCRHCLQS 66 (71)
T ss_dssp SSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCS-SCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCC-cCCCCCcCCccCcCc
Confidence 346799998875 66789999999999999999998 699999999999764
No 32
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.82 E-value=2.1e-09 Score=86.72 Aligned_cols=49 Identities=20% Similarity=0.516 Sum_probs=40.5
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHH-hcCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAK-IESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk-~k~sCPlCRkeFt~ 55 (673)
.++..|+||++.+.+ ++.++|+|.||..||..|.+ ....||+||+.+..
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCS---PKQTECGHRFCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CCCEECTTTCCEESS---CCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred CcCCCCCCCChHhcC---eeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 456899999999854 34468999999999999994 46789999988654
No 33
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.81 E-value=2.8e-09 Score=88.62 Aligned_cols=49 Identities=27% Similarity=0.611 Sum_probs=41.5
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHh------cCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKI------ESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~------k~sCPlCRkeFt~ 55 (673)
.++..|+||++.+.+ +++++|+|.||..||..|... ...||.||+.+..
T Consensus 17 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 17 KEEVTCPICLELLKE---PVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CTTTSCTTTCSCCSS---CEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred ccCCCCcCCChhhCc---ceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 456799999999854 467789999999999999977 6789999988764
No 34
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.80 E-value=4.3e-09 Score=92.09 Aligned_cols=49 Identities=33% Similarity=0.709 Sum_probs=42.8
Q ss_pred cccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCcc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~~ 146 (673)
+...|.+|+..+ .+++||.|+++||++|+.|+ ..+|+|+|+|+.|....
T Consensus 24 n~~~C~vC~~~g---~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 24 SATICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp SSSCCSSSCSSS---CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCcCcCcCCCC---CEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 346799999774 68999999999999999988 78999999999998643
No 35
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=98.80 E-value=2.2e-09 Score=96.25 Aligned_cols=52 Identities=27% Similarity=0.585 Sum_probs=43.3
Q ss_pred CCcccccccccccccC---------------CCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKS---------------IRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~---------------~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
.+++.|+||++.|... ....+++|+|.||..||.+|++....||+||+.|.+
T Consensus 35 ~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~~ 101 (106)
T 3dpl_R 35 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEF 101 (106)
T ss_dssp SCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCCE
T ss_pred CCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCccee
Confidence 4678999999998542 124567899999999999999999999999998754
No 36
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.79 E-value=3.3e-09 Score=90.64 Aligned_cols=48 Identities=23% Similarity=0.421 Sum_probs=40.4
Q ss_pred CCcccccccccccccCCCcEecc-CCCccCHhHHHHHHHh--cCCCCCCccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDS-CDHYFCFVCIMEWAKI--ESKCPMCKRRFT 54 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~-CgH~FC~~CI~eWsk~--k~sCPlCRkeFt 54 (673)
.++..|+||++.|.+ ++.++ |+|.||..||..|+.. ...||+||+.+.
T Consensus 11 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 11 PDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CTTTEETTTTEECSS---CEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred CcCCCCCCCChhhcC---ceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 456899999999954 56778 9999999999999864 368999999874
No 37
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.79 E-value=2.4e-09 Score=88.83 Aligned_cols=49 Identities=18% Similarity=0.252 Sum_probs=42.1
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHh-cCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKI-ESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~-k~sCPlCRkeFt~ 55 (673)
.++..|+||++.|.+ ++.++|+|.||..||..|.+. ...||+||+.+..
T Consensus 6 ~~~~~C~IC~~~~~~---Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 6 PEYFRCPISLELMKD---PVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp SSSSSCTTTSCCCSS---EEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred cccCCCCCccccccC---CEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCCh
Confidence 457899999999954 566789999999999999986 6789999998753
No 38
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.78 E-value=2.9e-09 Score=89.18 Aligned_cols=47 Identities=36% Similarity=0.984 Sum_probs=43.0
Q ss_pred ccccccCCCCccccccccccccccccccccCC-CCCCCC-CccCcCCCC
Q 005857 98 RCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEG-DWFCHDCTV 144 (673)
Q Consensus 98 ~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~g-dW~Cp~Cr~ 144 (673)
.|.+|+..++.+.||+||.|+++||++||+|+ ..+|+| +|||+.|..
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 67889988788899999999999999999987 789999 999999985
No 39
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=2.9e-09 Score=90.81 Aligned_cols=47 Identities=40% Similarity=1.020 Sum_probs=43.1
Q ss_pred ccccccCCCCccccccccccccccccccccCC-CCCCCC-CccCcCCCC
Q 005857 98 RCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEG-DWFCHDCTV 144 (673)
Q Consensus 98 ~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~g-dW~Cp~Cr~ 144 (673)
.|.+|+..++.+.||+||.|+.+||++||+|+ ..+|+| +|||+.|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 78999988778899999999999999999987 789999 999999974
No 40
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.77 E-value=4e-09 Score=87.68 Aligned_cols=49 Identities=31% Similarity=0.655 Sum_probs=41.5
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHh------cCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKI------ESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~------k~sCPlCRkeFt~ 55 (673)
.++..|+||++.+.+ +..++|+|.||..||..|... ...||.||+.+..
T Consensus 17 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 17 KEEVTCPICLELLTQ---PLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCTTTCSCCSS---CBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred cCCCCCCCCCcccCC---ceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 456899999999854 455689999999999999876 6789999998774
No 41
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.77 E-value=1.6e-09 Score=94.26 Aligned_cols=51 Identities=27% Similarity=0.562 Sum_probs=43.5
Q ss_pred ccccccccCCCC--ccccccccccccccccccccCCCC-----CCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTY--ESLLLLCDLCDTASHTYCVGMGNA-----VPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~--ee~LL~CD~Cd~afH~~CL~pp~~-----VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|+..+. .+.||+||.|+.+||++|++|+.. +|+++|||+.|....
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~ 73 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred CCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchh
Confidence 467999998754 367999999999999999999833 899999999998654
No 42
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.77 E-value=4.9e-09 Score=83.73 Aligned_cols=43 Identities=35% Similarity=0.706 Sum_probs=36.4
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHh---cCCCCCC
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKI---ESKCPMC 49 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~---k~sCPlC 49 (673)
.++..|+||++.+.+ ++.++|+|.||..||..|.+. ...||+|
T Consensus 18 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQK---PVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSS---CEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhCC---eEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 456899999999854 566699999999999999973 5689998
No 43
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=98.76 E-value=1.6e-09 Score=94.44 Aligned_cols=51 Identities=33% Similarity=0.935 Sum_probs=44.5
Q ss_pred cccccccccCCC--CccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 95 AYVRCNVCQGTT--YESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 95 e~~~CsVC~~~d--~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
+...|.+|+..+ +.+.||+||.|+.+||++|++|+ .+|+|+|||+.|....
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~-~vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVP-YIPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCS-SCCSSCCCCHHHHHHT
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCC-ccCCCceECccccCcc
Confidence 346799999875 66789999999999999999998 6999999999997653
No 44
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.75 E-value=1.4e-09 Score=88.53 Aligned_cols=50 Identities=30% Similarity=0.811 Sum_probs=42.6
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~I~ 57 (673)
.++..|+||++.+.+ ++++|+|.||..||..|.+....||+||+.+....
T Consensus 13 ~~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 62 (70)
T 2ecn_A 13 TDEEECCICMDGRAD----LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 62 (70)
T ss_dssp CCCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCC
T ss_pred CCCCCCeeCCcCccC----cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCC
Confidence 456799999998843 67789999999999999998889999998876433
No 45
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.75 E-value=1.5e-09 Score=89.77 Aligned_cols=49 Identities=29% Similarity=0.562 Sum_probs=41.0
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHh-------cCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKI-------ESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~-------k~sCPlCRkeFt~ 55 (673)
.++.+|+||++.|.+ ++.++|+|.||..||..|.+. ...||+||+.+..
T Consensus 10 ~~~~~C~IC~~~~~~---p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 10 QEEVTCPICLELLTE---PLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCEETTTTEECSS---CCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred ccCCCCcCCCcccCC---eeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 456899999999854 455689999999999999875 5689999998764
No 46
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.74 E-value=3.2e-09 Score=84.88 Aligned_cols=46 Identities=33% Similarity=0.847 Sum_probs=40.5
Q ss_pred ccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCC
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTV 144 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~ 144 (673)
...|.+|+.. +.|++||.|+.+||++||+|+ ..+|.++|||+.|..
T Consensus 9 ~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 9 EDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 4679999876 378999999999999999987 789999999999963
No 47
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.73 E-value=3.8e-09 Score=95.45 Aligned_cols=48 Identities=19% Similarity=0.416 Sum_probs=40.8
Q ss_pred CcccccccccccccCCCcEeccCCCccCHhHHHHHHHhc-CCCCCCcccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIE-SKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k-~sCPlCRkeFt~ 55 (673)
++..|+||++.|.+ ++.++|+|.||..||..|.... ..||+||+.+..
T Consensus 51 ~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVFR---PITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCSS---EEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHcC---cEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 45789999999954 6667999999999999999754 489999999865
No 48
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.73 E-value=4.9e-09 Score=89.51 Aligned_cols=47 Identities=38% Similarity=0.998 Sum_probs=42.9
Q ss_pred ccccccCCCCccccccccccccccccccccCC-CCCCCCC-ccCcCCCC
Q 005857 98 RCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGD-WFCHDCTV 144 (673)
Q Consensus 98 ~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gd-W~Cp~Cr~ 144 (673)
.|.+|+..++++.+|+||.|+++||++||+|+ ..+|+++ |||+.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 68899998888899999999999999999987 7899999 99999975
No 49
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.72 E-value=3.9e-09 Score=91.68 Aligned_cols=48 Identities=29% Similarity=0.708 Sum_probs=41.1
Q ss_pred CcccccccccccccCCCcEec-cCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQID-SCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld-~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
++..|+||++.|.+ ++.. +|+|.||..||..|......||+||+.+..
T Consensus 21 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFNI---AMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCcccCChhhCC---cCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 35789999999854 4444 899999999999999988899999998765
No 50
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.71 E-value=4.8e-09 Score=85.45 Aligned_cols=46 Identities=37% Similarity=0.876 Sum_probs=40.9
Q ss_pred ccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCC
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTV 144 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~ 144 (673)
...|.+|+.. +.|++||.|+++||++||+|+ ..+|.++|+|+.|..
T Consensus 11 ~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 11 QDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 3679999875 479999999999999999987 689999999999975
No 51
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.71 E-value=6.4e-09 Score=83.66 Aligned_cols=51 Identities=18% Similarity=0.442 Sum_probs=40.1
Q ss_pred Cccccccccc-ccccCCC-cEeccCCCccCHhHHHHHHHh-cCCCCCCcccccc
Q 005857 5 HSRSCGICLM-DEGKSIR-GQIDSCDHYFCFVCIMEWAKI-ESKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE-~f~~~~~-~~Ld~CgH~FC~~CI~eWsk~-k~sCPlCRkeFt~ 55 (673)
++..|+||++ .+.+... ..+++|+|.||..||.+|... ...||+||+.+..
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccc
Confidence 5689999999 7754222 256789999999999999644 5689999998754
No 52
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.71 E-value=5.1e-09 Score=92.40 Aligned_cols=49 Identities=22% Similarity=0.486 Sum_probs=41.9
Q ss_pred CCcccccccccccccCCCcEe-ccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQI-DSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~L-d~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
.++..|+||++.+.+ ++. .+|+|.||..||..|.+....||+||+.+..
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 13 NPHLMCVLCGGYFID---ATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHK 62 (108)
T ss_dssp GGGTBCTTTSSBCSS---EEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCS
T ss_pred CCcCCCccCChHHhC---cCEeCCCCChhhHHHHHHHHHhCCcCcCCCccccc
Confidence 356899999999854 444 4999999999999999888899999998765
No 53
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=98.70 E-value=3.7e-09 Score=86.55 Aligned_cols=53 Identities=21% Similarity=0.646 Sum_probs=43.5
Q ss_pred ccccccccccCCC--CccccccccccccccccccccCC-CC--C-CCCCccCcCCCCcc
Q 005857 94 YAYVRCNVCQGTT--YESLLLLCDLCDTASHTYCVGMG-NA--V-PEGDWFCHDCTVLR 146 (673)
Q Consensus 94 ~e~~~CsVC~~~d--~ee~LL~CD~Cd~afH~~CL~pp-~~--V-P~gdW~Cp~Cr~~~ 146 (673)
.+...|.+|+... +.+.||+||.|+.+||++|++|+ .. + |.++|||+.|....
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 3457899999873 45789999999999999999997 22 4 89999999997643
No 54
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.68 E-value=5.7e-09 Score=84.41 Aligned_cols=47 Identities=32% Similarity=0.818 Sum_probs=41.4
Q ss_pred ccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVL 145 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~ 145 (673)
...|.+|+.. +.|++||.|+.+||++|++|+ ..+|.++|||+.|...
T Consensus 5 ~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 5 EDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 3679999876 479999999999999999987 7899999999999754
No 55
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.66 E-value=8.6e-09 Score=80.38 Aligned_cols=43 Identities=35% Similarity=0.823 Sum_probs=35.5
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHH---hcCCCCCC
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAK---IESKCPMC 49 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk---~k~sCPlC 49 (673)
.++..|+||++.+.+ +++++|+|.||..||..|.+ ....||+|
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKE---PVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSS---CCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCc---cEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 456799999999854 45578999999999999954 46789998
No 56
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=98.65 E-value=3.3e-09 Score=97.07 Aligned_cols=52 Identities=27% Similarity=0.585 Sum_probs=1.7
Q ss_pred CCcccccccccccccC---------------CCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKS---------------IRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~---------------~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
.+++.|+||++.|.+. ...++.+|+|.||..||.+|++....||+||+.|..
T Consensus 46 ~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~~ 112 (117)
T 4a0k_B 46 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEF 112 (117)
T ss_dssp CCC----------------------------------------------------------------
T ss_pred CCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeeee
Confidence 4568999999998531 123345899999999999999999999999998754
No 57
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.63 E-value=1.1e-08 Score=85.92 Aligned_cols=53 Identities=30% Similarity=0.552 Sum_probs=44.4
Q ss_pred ccccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCcc
Q 005857 94 YAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 94 ~e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~~ 146 (673)
.+...|.+|+..++.+.|+.||.|+.+||.+|++++ ..+|.++|+|+.|....
T Consensus 16 ~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 16 NQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp CEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred CCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 344679999988776689999999999999999987 45667899999997643
No 58
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.62 E-value=1.1e-08 Score=89.86 Aligned_cols=48 Identities=33% Similarity=0.762 Sum_probs=39.9
Q ss_pred CcccccccccccccCCCcEeccCCCccCHhHHHHHHHhc---CCCCCCcccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIE---SKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k---~sCPlCRkeFt~ 55 (673)
+...|+||++.+.+ ++.++|+|.||..||..|.... ..||+||+.+..
T Consensus 20 ~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIKE---PVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCSS---CCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhcC---eEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 35689999998854 4556899999999999999764 489999998764
No 59
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=2.4e-08 Score=85.33 Aligned_cols=53 Identities=25% Similarity=0.608 Sum_probs=43.1
Q ss_pred CCcccccccccccccCCCcEeccCC-----CccCHhHHHHHHHhc--CCCCCCcccccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCD-----HYFCFVCIMEWAKIE--SKCPMCKRRFTSIR 57 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~Cg-----H~FC~~CI~eWsk~k--~sCPlCRkeFt~I~ 57 (673)
.++..|.||++.+.+.. .++++|. |+||..||.+|+... ..||+||..|....
T Consensus 13 ~~~~~C~IC~~~~~~~~-~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 13 SSQDICRICHCEGDDES-PLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp TTSCCCSSSCCCCCSSS-CEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCCCCeEcCccccCCC-eeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 45679999999886443 4568896 999999999999775 58999999987544
No 60
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.61 E-value=1.8e-08 Score=86.28 Aligned_cols=48 Identities=6% Similarity=-0.148 Sum_probs=42.8
Q ss_pred CcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
++..|+||++.|.+ +++.+|||+||..||..|+.....||+|++.+..
T Consensus 13 ~~~~CpI~~~~m~d---PV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 13 DEFRDPLMDTLMTD---PVRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp TTTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred hheECcccCchhcC---CeECCCCCEECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 56899999999965 7888899999999999999888899999988764
No 61
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.61 E-value=4.4e-09 Score=93.67 Aligned_cols=49 Identities=31% Similarity=0.663 Sum_probs=41.6
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHh-cCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKI-ESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~-k~sCPlCRkeFt~ 55 (673)
.++..|+||++.+.+ ++.++|+|.||..||..|.+. ...||+||+.+..
T Consensus 13 ~~~~~C~iC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILVE---PVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCSS---CEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccCc---eeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 356789999999854 566799999999999999865 6789999999875
No 62
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.60 E-value=1.8e-08 Score=85.52 Aligned_cols=55 Identities=16% Similarity=0.375 Sum_probs=40.7
Q ss_pred CCCcccccccccccccC-CCcEeccCCCccCHhHHHHHHH-hcCCCCCCcccccccc
Q 005857 3 GLHSRSCGICLMDEGKS-IRGQIDSCDHYFCFVCIMEWAK-IESKCPMCKRRFTSIR 57 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~-~~~~Ld~CgH~FC~~CI~eWsk-~k~sCPlCRkeFt~I~ 57 (673)
..++..|+||++.+... ......+|||.||..||..+.+ ....||.||+.|..-.
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP 64 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCS
T ss_pred cccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCc
Confidence 45678999999988422 2222235999999999998763 3578999999987543
No 63
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.60 E-value=1.4e-08 Score=95.62 Aligned_cols=49 Identities=22% Similarity=0.419 Sum_probs=41.4
Q ss_pred CcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcC-CCCCCccccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIES-KCPMCKRRFTSI 56 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~-sCPlCRkeFt~I 56 (673)
++..|+||++.|.+ ++.++|+|.||..||..|..... .||+||..+...
T Consensus 77 ~~~~C~IC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 77 QSFMCVCCQELVYQ---PVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHTBCTTTSSBCSS---EEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred cCCEeecCChhhcC---CEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 45789999999854 56679999999999999998654 799999987754
No 64
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.59 E-value=1.4e-08 Score=95.89 Aligned_cols=49 Identities=29% Similarity=0.657 Sum_probs=40.2
Q ss_pred CcccccccccccccCCCcEeccCCCccCHhHHHHHHHh-cCCCCCCcccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKI-ESKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~-k~sCPlCRkeFt~ 55 (673)
++..|+||++.|.+ ...+.+|+|.||..||..|... ...||+||..+..
T Consensus 53 ~~~~C~IC~~~~~~--p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 53 SELMCPICLDMLKN--TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp HHHBCTTTSSBCSS--EEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCCCcccChHhhC--cCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 34689999999954 2334489999999999999986 6789999998754
No 65
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.59 E-value=2e-08 Score=99.08 Aligned_cols=50 Identities=32% Similarity=0.652 Sum_probs=43.2
Q ss_pred cccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCccc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLRD 147 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~~~ 147 (673)
+...|.+|+.++ .+++||.|+++||.+|+.|+ ..+|.|+|+|+.|.....
T Consensus 6 ~~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 6 NEDWCAVCQNGG---DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp SCSSBTTTCCCE---EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCCC---ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 346799998764 58999999999999999987 779999999999997653
No 66
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.58 E-value=2.6e-08 Score=89.47 Aligned_cols=49 Identities=29% Similarity=0.611 Sum_probs=41.3
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcC-CCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIES-KCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~-sCPlCRkeFt~ 55 (673)
.++..|+||++.+.+ ++.++|+|.||..||..|.+... .||+||+.+..
T Consensus 16 ~~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 16 ESKYECPICLMALRE---AVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp CGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCcCChhhcC---eEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 356799999999854 56678999999999999997765 89999988764
No 67
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.56 E-value=9.9e-09 Score=81.11 Aligned_cols=48 Identities=21% Similarity=0.546 Sum_probs=40.0
Q ss_pred CCCCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 2 EGLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 2 e~~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
+..++..|+||++.|.+ ++.++|+|.||..||..| ...||+||+.+..
T Consensus 2 ee~~~~~C~IC~~~~~~---p~~l~CgH~fC~~Ci~~~---~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 2 EEFQFLRCQQCQAEAKC---PKLLPCLHTLCSGCLEAS---GMQCPICQAPWPL 49 (56)
T ss_dssp CSCCCSSCSSSCSSCBC---CSCSTTSCCSBTTTCSSS---SSSCSSCCSSSSC
T ss_pred CcccCCCceEeCCccCC---eEEcCCCCcccHHHHccC---CCCCCcCCcEeec
Confidence 45677899999999854 566789999999999874 5679999998764
No 68
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.55 E-value=2.5e-08 Score=88.88 Aligned_cols=50 Identities=34% Similarity=0.663 Sum_probs=42.0
Q ss_pred CcccccccccccccCCCcEeccCCCccCHhHHHHHHHh-cCCCCCCcccccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKI-ESKCPMCKRRFTSIR 57 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~-k~sCPlCRkeFt~I~ 57 (673)
++..|+||++.+.+ ++.++|+|.||..||..|+.. ...||+||+.+....
T Consensus 22 ~~~~C~IC~~~~~~---p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 72 (116)
T 1rmd_A 22 KSISCQICEHILAD---PVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTD 72 (116)
T ss_dssp HHTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG
T ss_pred CCCCCCCCCcHhcC---cEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhh
Confidence 45789999999854 566799999999999999987 678999999876533
No 69
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.53 E-value=2.7e-08 Score=100.30 Aligned_cols=48 Identities=35% Similarity=0.964 Sum_probs=39.4
Q ss_pred cccccccCCCCccccccccccccccccccccCC-CCCCCC-CccCcCCCC
Q 005857 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEG-DWFCHDCTV 144 (673)
Q Consensus 97 ~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~g-dW~Cp~Cr~ 144 (673)
..|.+|+..++.+.|++||.|+.+||++||+|| ..+|.| +|+|+.|..
T Consensus 175 c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 368999988778899999999999999999987 789999 999999975
No 70
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.52 E-value=5e-08 Score=94.43 Aligned_cols=47 Identities=34% Similarity=0.734 Sum_probs=41.8
Q ss_pred cccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCcc
Q 005857 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 97 ~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~~ 146 (673)
..|.+|+.++ .+++||.|+++||.+|+.|+ ..+|.|+|+|+.|+...
T Consensus 5 ~~C~~C~~~g---~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 5 DWCAVCQNGG---ELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SSCTTTCCCS---SCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CccccCCCCC---eeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 5799998764 58999999999999999987 78999999999998754
No 71
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.51 E-value=3e-08 Score=87.77 Aligned_cols=48 Identities=6% Similarity=-0.135 Sum_probs=42.4
Q ss_pred CcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
++..|+||++.|.+ +++++|||+||..||..|+.....||+|+.++..
T Consensus 28 ~~~~CpI~~~~m~d---PV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 28 DEFRDPLMDTLMTD---PVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTE 75 (100)
T ss_dssp TTTBCTTTCSBCSS---EEEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCT
T ss_pred HhhCCcCccCcccC---CeECCCCCEEchHHHHHHHHcCCCCCCCCCCCCh
Confidence 46799999999965 6777899999999999999877899999998764
No 72
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.51 E-value=4e-08 Score=86.69 Aligned_cols=48 Identities=8% Similarity=-0.147 Sum_probs=42.6
Q ss_pred CcccccccccccccCCCcEeccCC-CccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCD-HYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~Cg-H~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
++..|+||++.|.+ +++++|+ |+||..||..|+.....||+|++++..
T Consensus 21 ~~~~CpI~~~~m~d---PV~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 21 DEFLDPIMSTLMCD---PVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTM 69 (98)
T ss_dssp TTTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCT
T ss_pred HhcCCcCccccccC---CeECCCCCeEECHHHHHHHHHhCCCCCCCCCCCCh
Confidence 56899999999965 7888999 999999999999877889999998764
No 73
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.48 E-value=4.8e-08 Score=87.29 Aligned_cols=52 Identities=25% Similarity=0.596 Sum_probs=43.1
Q ss_pred CCccccccccccccc----CCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGK----SIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~----~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
.+...|+||++.+.+ ....+..+|+|.||..||.+|++....||+||+.+..
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 125 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 125 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCCh
Confidence 456789999998853 1233677899999999999999999999999988654
No 74
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.48 E-value=4.9e-08 Score=79.44 Aligned_cols=52 Identities=27% Similarity=0.544 Sum_probs=42.3
Q ss_pred CCCCcccccccccccccCCCcEec--cCCCc-cCHhHHHHHHHhcCCCCCCccccccc
Q 005857 2 EGLHSRSCGICLMDEGKSIRGQID--SCDHY-FCFVCIMEWAKIESKCPMCKRRFTSI 56 (673)
Q Consensus 2 e~~Ed~~CpICLE~f~~~~~~~Ld--~CgH~-FC~~CI~eWsk~k~sCPlCRkeFt~I 56 (673)
+..++.+|.||++.+.+ .++. +|+|. ||..|+..|.+....||+||+.+..+
T Consensus 4 ~~~~~~~C~IC~~~~~~---~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~ 58 (64)
T 2vje_A 4 PLNAIEPCVICQGRPKN---GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMI 58 (64)
T ss_dssp -CGGGSCCTTTSSSCSC---EEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEE
T ss_pred CCCCcCCCCcCCCCCCC---EEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhce
Confidence 45577899999997743 3444 99999 89999999998888999999987644
No 75
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.47 E-value=2.3e-08 Score=89.67 Aligned_cols=45 Identities=22% Similarity=0.512 Sum_probs=38.6
Q ss_pred CcccccccccccccCCCcEec-cCCCccCHhHHHHHHHhcCCCCCCccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQID-SCDHYFCFVCIMEWAKIESKCPMCKRRFT 54 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld-~CgH~FC~~CI~eWsk~k~sCPlCRkeFt 54 (673)
++..|+||++.|.+ ++.+ +|+|.||..||..|.. ..||+||+.+.
T Consensus 21 ~~~~C~IC~~~~~~---pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~ 66 (117)
T 1jm7_B 21 KLLRCSRCTNILRE---PVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAW 66 (117)
T ss_dssp HTTSCSSSCSCCSS---CBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCS
T ss_pred hCCCCCCCChHhhC---ccEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCc
Confidence 46789999999954 4555 8999999999999987 78999999874
No 76
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.44 E-value=1.6e-07 Score=78.93 Aligned_cols=54 Identities=33% Similarity=0.843 Sum_probs=43.2
Q ss_pred CCCcccccccccccCCCCccccccccc--cc-cccccccccCCCCCCCCCccCcCCCCcc
Q 005857 90 TADPYAYVRCNVCQGTTYESLLLLCDL--CD-TASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 90 eeDp~e~~~CsVC~~~d~ee~LL~CD~--Cd-~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
..++.+...| +|+.... +.|+.||. |. .+||+.|+++. .+|.++|||+.|...+
T Consensus 10 ~~d~~~~~~C-~C~~~~~-g~MI~CD~~~C~~~wfH~~Cvgl~-~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 10 PVDPNEPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLT-TKPRGKWFCPRCSQES 66 (71)
T ss_dssp CCCTTSCCCS-TTCCCSC-SSEECCSCSSCSCCCEETTTTTCS-SCCSSCCCCTTTSSCS
T ss_pred ccCCCCCCEE-ECCCCCC-CCEeEeeCCCCCCccEecccCCcC-cCCCCCEECCCCCccc
Confidence 3344455788 7988654 57999999 77 69999999986 6788999999998654
No 77
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.43 E-value=4.9e-08 Score=81.25 Aligned_cols=46 Identities=28% Similarity=0.564 Sum_probs=38.9
Q ss_pred CcccccccccccccCCCcEeccCCCc-cCHhHHHHHHHhcCCCCCCcccccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHY-FCFVCIMEWAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~-FC~~CI~eWsk~k~sCPlCRkeFt~I~ 57 (673)
++..|+||++.+.+ +++++|+|. ||..|+..| ..||+||+.+....
T Consensus 23 ~~~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~~ 69 (74)
T 4ic3_A 23 EEKLCKICMDRNIA---IVFVPCGHLVTCKQCAEAV----DKCPMCYTVITFKQ 69 (74)
T ss_dssp HHTBCTTTSSSBCC---EEEETTCCBCCCHHHHTTC----SBCTTTCCBCSEEE
T ss_pred cCCCCCCCCCCCCC---EEEcCCCChhHHHHhhhcC----ccCCCcCcCccCcE
Confidence 45789999998744 677799999 999999999 78999999876543
No 78
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=1.5e-07 Score=81.77 Aligned_cols=48 Identities=21% Similarity=0.397 Sum_probs=40.1
Q ss_pred CCCCcccccccccccccCCCcEecc-CCCccCHhHHHHHHHhc------CCCCC--Cccc
Q 005857 2 EGLHSRSCGICLMDEGKSIRGQIDS-CDHYFCFVCIMEWAKIE------SKCPM--CKRR 52 (673)
Q Consensus 2 e~~Ed~~CpICLE~f~~~~~~~Ld~-CgH~FC~~CI~eWsk~k------~sCPl--CRke 52 (673)
...++..||||++.|.+ ++..+ |+|.||..||..|+... ..||+ |++.
T Consensus 3 ~~~~~~~CPI~~~~~~d---PV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 3 SGSSGFTCPITKEEMKK---PVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCSSCCBCTTTCSBCSS---EEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred CCCcEeECcCcCchhcC---CEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 34677899999999965 67775 99999999999998653 58999 8866
No 79
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.40 E-value=1.5e-07 Score=92.15 Aligned_cols=47 Identities=34% Similarity=0.747 Sum_probs=41.5
Q ss_pred cccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCcc
Q 005857 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 97 ~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~~ 146 (673)
..|.+|+.++ .+++||.|+++||++|+.|+ ..+|.|+|+|+.|....
T Consensus 3 ~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 3 TICRVCQKPG---DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCBTTTCCCS---SCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CcCccCCCCC---ceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 4699999775 58999999999999999987 78999999999998753
No 80
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.40 E-value=1.9e-07 Score=82.67 Aligned_cols=48 Identities=27% Similarity=0.807 Sum_probs=40.9
Q ss_pred ccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVL 145 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~ 145 (673)
.+.| +|+..++.+.|+.|+.|+.+||..|++|+ ..+|+ +|+|+.|+..
T Consensus 28 ~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~ 76 (98)
T 2lv9_A 28 VTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPR 76 (98)
T ss_dssp BCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSS
T ss_pred CEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCC
Confidence 4678 89888777889999999999999999987 55664 8999999753
No 81
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.38 E-value=1.6e-07 Score=93.64 Aligned_cols=48 Identities=13% Similarity=-0.042 Sum_probs=41.1
Q ss_pred CcccccccccccccCCCcEeccCCCccCHhHHHHHHHh-cCCCCCCcccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKI-ESKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~-k~sCPlCRkeFt~ 55 (673)
+...|+||++.|.+ +++.+|||+||..||..|+.. ...||+|+.++..
T Consensus 207 ~~~~c~i~~~~~~d---Pv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 207 DYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp STTBCTTTCSBCSS---EEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred cccCCcCcCCHhcC---CeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 56889999999965 788889999999999999976 3459999998753
No 82
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.36 E-value=4e-07 Score=80.07 Aligned_cols=54 Identities=33% Similarity=0.843 Sum_probs=43.1
Q ss_pred CCCcccccccccccCCCCccccccccc--cc-cccccccccCCCCCCCCCccCcCCCCcc
Q 005857 90 TADPYAYVRCNVCQGTTYESLLLLCDL--CD-TASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 90 eeDp~e~~~CsVC~~~d~ee~LL~CD~--Cd-~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
..++.+..+| +|+.... +.|+.||. |. .|||..|+++. .+|.++|||+.|...+
T Consensus 30 ~~d~~e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVgl~-~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 30 PVDPNEPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLT-TKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCCSCCCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTTCS-SCCCSSCCCTTTCCCC
T ss_pred CcCCCCCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCCcC-cCCCCCEECcCccCcC
Confidence 3444555788 9988654 57999999 76 69999999986 6778999999998654
No 83
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.36 E-value=6.6e-08 Score=90.32 Aligned_cols=48 Identities=17% Similarity=0.389 Sum_probs=40.2
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcC-CCCCCccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIES-KCPMCKRRFT 54 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~-sCPlCRkeFt 54 (673)
.++..|+||++.+.+ ++..+|+|.||..||..|++... .||+||+++.
T Consensus 29 ~~~~~C~IC~~~~~~---pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~ 77 (141)
T 3knv_A 29 EAKYLCSACRNVLRR---PFQAQCGHRYCSFCLASILSSGPQNCAACVHEGI 77 (141)
T ss_dssp CGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHGGGSCEECHHHHHTTC
T ss_pred CcCcCCCCCChhhcC---cEECCCCCccCHHHHHHHHhcCCCCCCCCCCccc
Confidence 356799999999954 46679999999999999997654 8999998753
No 84
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.32 E-value=8.3e-08 Score=78.00 Aligned_cols=51 Identities=35% Similarity=0.892 Sum_probs=39.2
Q ss_pred CcccccccccccCCCCccccccccc--cc-cccccccccCCCCCCCCCccCcCCCCc
Q 005857 92 DPYAYVRCNVCQGTTYESLLLLCDL--CD-TASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 92 Dp~e~~~CsVC~~~d~ee~LL~CD~--Cd-~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
++.+...| +|+.... +.|+.||. |. .+||..|+++. .+|.++|||+.|...
T Consensus 6 d~~e~~~C-~C~~~~~-g~mi~CD~cdC~~~wfH~~Cvgl~-~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 6 DPNEPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLT-TKPRGKWFCPRCSQE 59 (60)
T ss_dssp ---CCEET-TTTEECC-SEEEECSCTTCSSCEEETGGGTCS-SCCSSCCCCHHHHC-
T ss_pred CCCCCCEE-ECCCcCC-CCEEEeCCCCCCCceEehhcCCCC-cCCCCCEECcCccCc
Confidence 34445678 8988654 57999999 65 79999999976 688899999999753
No 85
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.29 E-value=2.5e-07 Score=75.02 Aligned_cols=52 Identities=21% Similarity=0.490 Sum_probs=40.5
Q ss_pred CCcccccccccccccCCCcEeccCCCc-cCHhHHHHHHHhcCCCCCCccccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHY-FCFVCIMEWAKIESKCPMCKRRFTSI 56 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~-FC~~CI~eWsk~k~sCPlCRkeFt~I 56 (673)
..+..|.||++...+ ...+..+|+|. ||..|+..|.+....||+||+.+..+
T Consensus 5 ~~~~~C~IC~~~~~~-~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~ 57 (63)
T 2vje_B 5 NLLKPCSLCEKRPRD-GNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLV 57 (63)
T ss_dssp GGGSBCTTTSSSBSC-EEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEE
T ss_pred CcCCCCcccCCcCCC-eEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhce
Confidence 345789999997643 11233499998 99999999988778999999987644
No 86
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.29 E-value=1.1e-07 Score=77.11 Aligned_cols=51 Identities=29% Similarity=0.761 Sum_probs=39.7
Q ss_pred CcccccccccccCCCCccccccccc--cc-cccccccccCCCCCCCCCccCcCCCCc
Q 005857 92 DPYAYVRCNVCQGTTYESLLLLCDL--CD-TASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 92 Dp~e~~~CsVC~~~d~ee~LL~CD~--Cd-~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
|+.+...| +|+.... +.|+.||. |+ .+||..|+++. .+|.++|+|+.|...
T Consensus 5 d~~e~~yC-~C~~~~~-g~mi~CD~~~C~~~wfH~~Cvgl~-~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 5 GSNEPTYC-LCHQVSY-GEMIGCDNPDCPIEWFHFACVDLT-TKPKGKWFCPRCVQE 58 (59)
T ss_dssp ---CCEET-TTTEECC-SEEEECSCTTCSSCEEETGGGTCS-SCCSSCCCCHHHHCC
T ss_pred CCCCCcEE-ECCCCCC-CCeeEeeCCCCCCCCEecccCCcc-cCCCCCEECcCccCc
Confidence 44455778 8988654 57999999 77 69999999986 678899999999753
No 87
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.28 E-value=3.8e-07 Score=98.44 Aligned_cols=49 Identities=24% Similarity=0.786 Sum_probs=41.8
Q ss_pred cccccccccccccCCCcEeccCCCccCHhHHHHHHH-hcCCCCCCcccccccc
Q 005857 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAK-IESKCPMCKRRFTSIR 57 (673)
Q Consensus 6 d~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk-~k~sCPlCRkeFt~I~ 57 (673)
...|+||++.+.+ +++.+|+|.||..||..|.. ....||+||+.+....
T Consensus 332 ~~~C~ICle~~~~---pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~~ 381 (389)
T 2y1n_A 332 FQLCKICAENDKD---VKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 381 (389)
T ss_dssp SSBCTTTSSSBCC---EEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEEE
T ss_pred CCCCCccCcCCCC---eEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCce
Confidence 3689999998844 67789999999999999998 5788999999877543
No 88
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.27 E-value=3.8e-07 Score=86.36 Aligned_cols=49 Identities=29% Similarity=0.606 Sum_probs=41.2
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhc-CCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIE-SKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k-~sCPlCRkeFt~ 55 (673)
.++..|+||++.+.+ ++..+|+|.||..||..|+... ..||+||..+..
T Consensus 16 ~~~~~C~IC~~~~~~---pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 16 ESKYECPICLMALRE---AVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp CGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCCChhhcC---cEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcch
Confidence 456899999999954 4667899999999999999764 489999988765
No 89
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.25 E-value=3.9e-07 Score=77.19 Aligned_cols=48 Identities=17% Similarity=0.536 Sum_probs=39.7
Q ss_pred cccccccccccccCCCcEeccCCCccCHhHHHHHHHhc--CCCCCCcccccc
Q 005857 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIE--SKCPMCKRRFTS 55 (673)
Q Consensus 6 d~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k--~sCPlCRkeFt~ 55 (673)
...|+||++.+... ..+..|+|.||..||.+|++.. ..||+|++.+..
T Consensus 15 i~~C~IC~~~i~~g--~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~ 64 (74)
T 2ct0_A 15 VKICNICHSLLIQG--QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 64 (74)
T ss_dssp SCBCSSSCCBCSSS--EECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCS
T ss_pred CCcCcchhhHcccC--CccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCC
Confidence 37899999999543 2444799999999999999876 789999988664
No 90
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.24 E-value=3.4e-07 Score=76.15 Aligned_cols=46 Identities=28% Similarity=0.569 Sum_probs=37.2
Q ss_pred CcccccccccccccCCCcEeccCCCc-cCHhHHHHHHHhcCCCCCCcccccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHY-FCFVCIMEWAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~-FC~~CI~eWsk~k~sCPlCRkeFt~I~ 57 (673)
++.+|+||++.+.+ +++++|+|. ||..|+.. ...||+||+.+....
T Consensus 24 ~~~~C~IC~~~~~~---~~~~pCgH~~~C~~C~~~----~~~CP~Cr~~i~~~~ 70 (75)
T 2ecg_A 24 EEKLCKICMDRNIA---IVFVPCGHLVTCKQCAEA----VDKCPMCYTVITFKQ 70 (75)
T ss_dssp HHHSCSSSCSSCCC---BCCSSSCCCCBCHHHHHH----CSBCTTTCCBCCCCC
T ss_pred CCCCCCcCCCCCCC---EEEecCCCHHHHHHHhhC----CCCCccCCceecCcE
Confidence 35689999998744 567799999 99999964 378999999876543
No 91
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.19 E-value=2.6e-07 Score=75.69 Aligned_cols=51 Identities=31% Similarity=0.792 Sum_probs=39.5
Q ss_pred CcccccccccccCCCCccccccccc--cc-cccccccccCCCCCCCCCccCcCCCCc
Q 005857 92 DPYAYVRCNVCQGTTYESLLLLCDL--CD-TASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 92 Dp~e~~~CsVC~~~d~ee~LL~CD~--Cd-~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
++.+...| +|+.... +.|+.||. |. .+||..|+++. .+|.++|+|+.|...
T Consensus 7 d~~e~~yC-~C~~~~~-g~MI~CD~c~C~~~WfH~~Cvgl~-~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 7 DPNEPTYC-LCNQVSY-GEMIGCDNEQCPIEWFHFSCVSLT-YKPKGKWYCPKCRGD 60 (62)
T ss_dssp ---CCEET-TTTEECC-SEEEECSCTTCSSCEEETGGGTCS-SCCSSCCCCHHHHTC
T ss_pred CCCCCcEE-ECCCCCC-CCeeeeeCCCCCcccEecccCCcC-cCCCCCEECcCcccC
Confidence 34455778 8988644 47999999 55 89999999987 578899999999754
No 92
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.17 E-value=7.8e-07 Score=80.35 Aligned_cols=47 Identities=28% Similarity=0.556 Sum_probs=39.7
Q ss_pred cccccccccCCCCcccccccc--ccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 95 AYVRCNVCQGTTYESLLLLCD--LCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD--~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
+...|.+|++. +.|++|| .|+++||++||++. .+|+|+|+|+.|...
T Consensus 14 ~~~~C~~C~~~---G~ll~CD~~~Cp~~fH~~Cl~L~-~~P~g~W~Cp~c~C~ 62 (107)
T 4gne_A 14 HEDYCFQCGDG---GELVMCDKKDCPKAYHLLCLNLT-QPPYGKWECPWHQCD 62 (107)
T ss_dssp SCSSCTTTCCC---SEEEECCSTTCCCEECTGGGTCS-SCCSSCCCCGGGBCT
T ss_pred CCCCCCcCCCC---CcEeEECCCCCCcccccccCcCC-cCCCCCEECCCCCCC
Confidence 44679999855 4699999 89999999999954 799999999998653
No 93
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.14 E-value=1.1e-06 Score=85.67 Aligned_cols=49 Identities=12% Similarity=-0.074 Sum_probs=41.6
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhc-CCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIE-SKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k-~sCPlCRkeFt~ 55 (673)
.+...||||++.|.+ +++.+|||+||..||..|+... ..||+|+.++..
T Consensus 104 p~~f~CPI~~elm~D---PV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 104 PDYLCGKISFELMRE---PCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp CGGGBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred cHhhcccCccccCCC---CeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 356899999999965 7888999999999999999763 469999988764
No 94
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.14 E-value=1.6e-06 Score=71.59 Aligned_cols=48 Identities=23% Similarity=0.513 Sum_probs=39.2
Q ss_pred CCCcccccccccccccCCCcEeccCCCc-cCHhHHHHHHHhcCCCCCCcccccccc
Q 005857 3 GLHSRSCGICLMDEGKSIRGQIDSCDHY-FCFVCIMEWAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~~~~~Ld~CgH~-FC~~CI~eWsk~k~sCPlCRkeFt~I~ 57 (673)
..++..|.||++...+ .++++|+|. ||..|+.. ...||+||+.+....
T Consensus 12 ~~~~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~~~~ 60 (68)
T 2ea5_A 12 EENSKDCVVCQNGTVN---WVLLPCRHTCLCDGCVKY----FQQCPMCRQFVQESF 60 (68)
T ss_dssp CCCSSCCSSSSSSCCC---CEETTTTBCCSCTTHHHH----CSSCTTTCCCCCCEE
T ss_pred CCCCCCCCCcCcCCCC---EEEECCCChhhhHHHHhc----CCCCCCCCcchhceE
Confidence 3456799999997643 788899999 99999984 478999999877654
No 95
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.13 E-value=8.2e-07 Score=77.97 Aligned_cols=49 Identities=31% Similarity=0.776 Sum_probs=39.4
Q ss_pred cccccccccccCCCCccccccccccc---cccccccccCCCCCCCCCccCcC-CCC
Q 005857 93 PYAYVRCNVCQGTTYESLLLLCDLCD---TASHTYCVGMGNAVPEGDWFCHD-CTV 144 (673)
Q Consensus 93 p~e~~~CsVC~~~d~ee~LL~CD~Cd---~afH~~CL~pp~~VP~gdW~Cp~-Cr~ 144 (673)
+.+..+| +|+..... .|+.||.|+ .|||+.||++. .+|.+.|||+. |..
T Consensus 23 ~~~~~yC-iC~~~~~g-~MI~CD~c~C~~eWfH~~CVgl~-~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 23 NQEEVYC-FCRNVSYG-PMVACDNPACPFEWFHYGCVGLK-QAPKGKWYCSKDCKE 75 (90)
T ss_dssp -CCSCCS-TTTCCCSS-SEECCCSSSCSCSCEETTTSSCS-SCTTSCCCSSHHHHH
T ss_pred CCCCcEE-EeCCCCCC-CEEEecCCCCccccCcCccCCCC-cCCCCCccCChhhcc
Confidence 3345678 89876553 699999976 89999999987 67889999999 974
No 96
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.13 E-value=7.6e-07 Score=76.83 Aligned_cols=50 Identities=24% Similarity=0.639 Sum_probs=38.4
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHh--------cCCCCC--Ccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKI--------ESKCPM--CKRRF 53 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~--------k~sCPl--CRkeF 53 (673)
.+..+|+||++.+.......+.+|+|.||..||..+.+. ...||. |+..+
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~ 62 (94)
T 1wim_A 3 SGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQG 62 (94)
T ss_dssp CSBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCC
T ss_pred CCCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCC
Confidence 356799999999854433445679999999999998753 137999 99873
No 97
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.11 E-value=1.9e-06 Score=69.78 Aligned_cols=52 Identities=23% Similarity=0.597 Sum_probs=41.5
Q ss_pred CCCCCcccccccccccccCCCcEeccCC--C---ccCHhHHHHHHHh--cCCCCCCcccccc
Q 005857 1 MEGLHSRSCGICLMDEGKSIRGQIDSCD--H---YFCFVCIMEWAKI--ESKCPMCKRRFTS 55 (673)
Q Consensus 1 ~e~~Ed~~CpICLE~f~~~~~~~Ld~Cg--H---~FC~~CI~eWsk~--k~sCPlCRkeFt~ 55 (673)
|+..+...|.||++...+ .++.||. + +||..||.+|... ...||+|+.+|..
T Consensus 1 ~e~~~~~~CrIC~~~~~~---~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 1 MEDEDVPVCWICNEELGN---ERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp CTTCSCCEETTTTEECSC---CCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCCCCEeEEeecCCCC---ceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeec
Confidence 678888999999997532 2457764 4 9999999999865 5789999998864
No 98
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.05 E-value=9.7e-07 Score=74.74 Aligned_cols=46 Identities=24% Similarity=0.686 Sum_probs=38.2
Q ss_pred CcccccccccccccCCCcEeccCCCc-cCHhHHHHHHHhcCCCCCCcccccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHY-FCFVCIMEWAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~-FC~~CI~eWsk~k~sCPlCRkeFt~I~ 57 (673)
++..|+||++.+.+ .++++|+|. ||..|+..| ..||+||+.+....
T Consensus 17 ~~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~~~ 63 (79)
T 2yho_A 17 EAMLCMVCCEEEIN---STFCPCGHTVCCESCAAQL----QSCPVCRSRVEHVQ 63 (79)
T ss_dssp HHTBCTTTSSSBCC---EEEETTCBCCBCHHHHTTC----SBCTTTCCBCCEEE
T ss_pred CCCEeEEeCcccCc---EEEECCCCHHHHHHHHHhc----CcCCCCCchhhCeE
Confidence 35689999997744 677899999 999999887 48999999877654
No 99
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.05 E-value=2.3e-06 Score=76.52 Aligned_cols=48 Identities=21% Similarity=0.646 Sum_probs=41.7
Q ss_pred ccccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCC
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCT 143 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr 143 (673)
...|.+|+..++.+.|++|+.|++.||.+||++. ..++.+.|+|+.|.
T Consensus 7 ~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 7 GANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 4679999998876678999999999999999987 44678999999986
No 100
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.00 E-value=2e-06 Score=71.58 Aligned_cols=54 Identities=22% Similarity=0.474 Sum_probs=43.0
Q ss_pred CCCcccccccccccCCCCccccccccccccccccccccCCC-CCCCCCccCcCCCCc
Q 005857 90 TADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGN-AVPEGDWFCHDCTVL 145 (673)
Q Consensus 90 eeDp~e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~-~VP~gdW~Cp~Cr~~ 145 (673)
+.+..+..+| +|+...+.+.|+.|+.|..|||..|+++.. .+| ..|+|+.|...
T Consensus 13 ~~~~~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~s 67 (68)
T 3o70_A 13 NLYFQGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRDS 67 (68)
T ss_dssp -CTTTTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHTC
T ss_pred cCCCCCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCCC
Confidence 3344556789 999887767899999999999999999874 344 68999999754
No 101
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=97.86 E-value=3.7e-06 Score=86.58 Aligned_cols=50 Identities=22% Similarity=0.375 Sum_probs=40.4
Q ss_pred CCCcccccccccccccCCCcEe-ccCCCccCHhHHHHHHHh--cCCCCC--Ccccccc
Q 005857 3 GLHSRSCGICLMDEGKSIRGQI-DSCDHYFCFVCIMEWAKI--ESKCPM--CKRRFTS 55 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~~~~~L-d~CgH~FC~~CI~eWsk~--k~sCPl--CRkeFt~ 55 (673)
...+..||||++.|.+ ++. ..|||.||..||..|.+. ...||+ |++.+..
T Consensus 178 ~~~el~CPIcl~~f~D---PVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 178 GKIELTCPITCKPYEA---PLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp SBCCSBCTTTSSBCSS---EEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred CceeeECcCccCcccC---CeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 3566899999999954 454 489999999999999865 357999 9997654
No 102
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.84 E-value=3.8e-06 Score=70.31 Aligned_cols=48 Identities=33% Similarity=0.825 Sum_probs=38.8
Q ss_pred cccccccccCCCCccccccccccc---cccccccccCCCCCCCCCccCcCCCCc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCD---TASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd---~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
+..+| +|...+. +.|+.||.|+ .+||..|+++. ..|.+.|||+.|...
T Consensus 5 ~~~yC-~C~~~~~-g~MI~CD~cdC~~~WfH~~Cvgl~-~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 5 SSGYC-ICNQVSY-GEMVGCDNQDCPIEWFHYGCVGLT-EAPKGKWYCPQCTAA 55 (70)
T ss_dssp CCCCS-TTSCCCC-SSEECCSCTTCSCCCEEHHHHTCS-SCCSSCCCCHHHHHH
T ss_pred CCeEE-EcCCCCC-CCEeEeCCCCCCccCCcccccccC-cCCCCCEECCCCCcc
Confidence 34678 5887654 4799999976 79999999987 568899999999754
No 103
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.80 E-value=6.5e-06 Score=69.89 Aligned_cols=55 Identities=24% Similarity=0.568 Sum_probs=42.7
Q ss_pred CCcccccccccccCCCCcccccccc--ccccccccccccCCCCC------CCCCccCcCCCCcc
Q 005857 91 ADPYAYVRCNVCQGTTYESLLLLCD--LCDTASHTYCVGMGNAV------PEGDWFCHDCTVLR 146 (673)
Q Consensus 91 eDp~e~~~CsVC~~~d~ee~LL~CD--~Cd~afH~~CL~pp~~V------P~gdW~Cp~Cr~~~ 146 (673)
.++....+| +|+..+..+.|+.|+ .|..|||..|+++.... ....|+|+.|+..+
T Consensus 11 ~~~~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 11 FQPEIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp SSCCCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred cCCCCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 344456789 899986667899999 99999999999986221 13579999998654
No 104
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=97.70 E-value=1.6e-05 Score=64.53 Aligned_cols=47 Identities=11% Similarity=0.126 Sum_probs=40.2
Q ss_pred cccccccccccccCCCcEec-cCCCccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 6 SRSCGICLMDEGKSIRGQID-SCDHYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 6 d~~CpICLE~f~~~~~~~Ld-~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
...|+||++.+.+ +++. +|||.|+..||.+|.+....||++++++..
T Consensus 3 ~~~CpIs~~~m~d---PV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~ 50 (61)
T 2bay_A 3 HMLCAISGKVPRR---PVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSI 50 (61)
T ss_dssp -CCCTTTCSCCSS---EEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCG
T ss_pred eEEecCCCCCCCC---CEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCCh
Confidence 3689999999965 5776 899999999999999877789999988654
No 105
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=97.68 E-value=1.1e-05 Score=76.25 Aligned_cols=47 Identities=23% Similarity=0.569 Sum_probs=40.0
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCC--------CCCCCccCcCCCCc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNA--------VPEGDWFCHDCTVL 145 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~--------VP~gdW~Cp~Cr~~ 145 (673)
...|.+|+.++ .+++||.|++.||..||.|+.. .|.++|+|+.|...
T Consensus 63 ~d~C~vC~~GG---~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 63 DEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp BCSCSSSCCCS---SEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCeecccCCCC---cEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 36799999875 6899999999999999997632 48999999999864
No 106
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.68 E-value=1.6e-05 Score=66.42 Aligned_cols=51 Identities=29% Similarity=0.643 Sum_probs=39.5
Q ss_pred cccccccccCCCC-ccccccccccccccccccccCCC-CCCCCCccCcCCCCcc
Q 005857 95 AYVRCNVCQGTTY-ESLLLLCDLCDTASHTYCVGMGN-AVPEGDWFCHDCTVLR 146 (673)
Q Consensus 95 e~~~CsVC~~~d~-ee~LL~CD~Cd~afH~~CL~pp~-~VP~gdW~Cp~Cr~~~ 146 (673)
...+| +|+...+ ...|+.|+.|..|||..|+++.. ......|+|+.|....
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELS 67 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHC
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCC
Confidence 34679 7998754 34799999999999999999862 2234789999997643
No 107
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.64 E-value=4.9e-06 Score=69.99 Aligned_cols=50 Identities=30% Similarity=0.824 Sum_probs=40.2
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCC----C--CCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNA----V--PEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~----V--P~gdW~Cp~Cr~~~ 146 (673)
..+| +|+...+...|+.|+.|+.|||..|+++... + +...|+|+.|....
T Consensus 16 ~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 16 ALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 4678 8998877678999999999999999997621 1 34689999998654
No 108
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.64 E-value=1.3e-05 Score=66.40 Aligned_cols=52 Identities=27% Similarity=0.627 Sum_probs=39.5
Q ss_pred ccccccccccCCCCcccccccc--ccccccccccccCCCCC-----CCCCccCcCCCCcc
Q 005857 94 YAYVRCNVCQGTTYESLLLLCD--LCDTASHTYCVGMGNAV-----PEGDWFCHDCTVLR 146 (673)
Q Consensus 94 ~e~~~CsVC~~~d~ee~LL~CD--~Cd~afH~~CL~pp~~V-----P~gdW~Cp~Cr~~~ 146 (673)
...+.| +|+.....+.|+.|+ .|..|||..|+++.... ....|+|+.|+..+
T Consensus 8 e~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~r 66 (68)
T 2rsd_A 8 EAKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLSR 66 (68)
T ss_dssp SCEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHHH
T ss_pred CCCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCcc
Confidence 344778 798877777899999 59999999999975211 12479999998654
No 109
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=97.64 E-value=1.5e-05 Score=84.89 Aligned_cols=52 Identities=25% Similarity=0.553 Sum_probs=39.1
Q ss_pred CCccccccccccccc-CCCc--Ee--ccCCCccCHhHHHHHHHhc-----------CCCCCCcccccc
Q 005857 4 LHSRSCGICLMDEGK-SIRG--QI--DSCDHYFCFVCIMEWAKIE-----------SKCPMCKRRFTS 55 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~-~~~~--~L--d~CgH~FC~~CI~eWsk~k-----------~sCPlCRkeFt~ 55 (673)
.+..+|+||++.+.+ ...+ .+ ..|+|.||..||.+|.+.. ..||.||+++..
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 345689999999864 2222 23 3799999999999999652 369999998664
No 110
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=97.61 E-value=1.3e-05 Score=62.97 Aligned_cols=47 Identities=26% Similarity=0.619 Sum_probs=38.5
Q ss_pred ccccccccCCCCccccccccccccccccccccCCC-CCCCCCccCcCCCC
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGN-AVPEGDWFCHDCTV 144 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~-~VP~gdW~Cp~Cr~ 144 (673)
...| +|+...+.+.|+.|+.|..+||..|+++.. .+| ..|+|+.|..
T Consensus 4 ~~~C-~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~~ 51 (52)
T 3o7a_A 4 LVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 51 (52)
T ss_dssp CBCS-TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHHT
T ss_pred CeEE-EeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCCC
Confidence 3567 798877666899999999999999999873 344 6899999964
No 111
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.57 E-value=2e-05 Score=64.01 Aligned_cols=51 Identities=24% Similarity=0.554 Sum_probs=40.0
Q ss_pred ccccccccCCCC-ccccccccccccccccccccCCCC-CC-CCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTY-ESLLLLCDLCDTASHTYCVGMGNA-VP-EGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~-ee~LL~CD~Cd~afH~~CL~pp~~-VP-~gdW~Cp~Cr~~~ 146 (673)
...|.+|+...+ ...|+.|+.|+.|||..|+++... .. ...|+|+.|+..+
T Consensus 6 ~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~ 59 (64)
T 1we9_A 6 SGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKS 59 (64)
T ss_dssp CCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTT
T ss_pred CCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcC
Confidence 367989988753 567999999999999999998622 22 3689999998654
No 112
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.53 E-value=2.1e-05 Score=70.28 Aligned_cols=49 Identities=27% Similarity=0.703 Sum_probs=41.1
Q ss_pred cccccccccccCCCcEeccCCCccCHhHHHHHHHh-cCCCCCCccccccccC
Q 005857 8 SCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKI-ESKCPMCKRRFTSIRR 58 (673)
Q Consensus 8 ~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~-k~sCPlCRkeFt~I~~ 58 (673)
-|++|--.+ ...+.+.+|.|.||++|+..|.+. ...||.|+.++..+..
T Consensus 3 fC~~C~~Pi--~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rVe~ 52 (101)
T 3vk6_A 3 FCDKCGLPI--KVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQ 52 (101)
T ss_dssp BCTTTCSBC--SEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEEEE
T ss_pred ecCccCCCe--EEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeeeEE
Confidence 488888777 456888899999999999999855 6899999999887763
No 113
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.37 E-value=6.4e-05 Score=63.74 Aligned_cols=50 Identities=28% Similarity=0.667 Sum_probs=39.2
Q ss_pred ccccccccCCCC-ccccccccccccccccccccCCC-C-CCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTY-ESLLLLCDLCDTASHTYCVGMGN-A-VPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~-ee~LL~CD~Cd~afH~~CL~pp~-~-VP~gdW~Cp~Cr~~~ 146 (673)
...| +|+...+ ...|+.||.|..|||..|+++.. . .....|+|+.|....
T Consensus 12 ~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 12 PVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred ccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 3667 8988753 57899999999999999999762 1 123689999998754
No 114
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=97.36 E-value=2.8e-05 Score=70.05 Aligned_cols=47 Identities=28% Similarity=0.685 Sum_probs=38.5
Q ss_pred cccccccCC------CCccccccccccccccccccccCC----CCCCCCCccCcCCC
Q 005857 97 VRCNVCQGT------TYESLLLLCDLCDTASHTYCVGMG----NAVPEGDWFCHDCT 143 (673)
Q Consensus 97 ~~CsVC~~~------d~ee~LL~CD~Cd~afH~~CL~pp----~~VP~gdW~Cp~Cr 143 (673)
..|.+|... +..+.|+.|+.|++.||.+||++. ..++.++|+|+.|+
T Consensus 6 ~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 6 PICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp SSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred ccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 568999765 244689999999999999999853 35678999999996
No 115
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=97.35 E-value=3e-05 Score=70.04 Aligned_cols=47 Identities=28% Similarity=0.720 Sum_probs=38.5
Q ss_pred cccccccCCC-------CccccccccccccccccccccCC----CCCCCCCccCcCCC
Q 005857 97 VRCNVCQGTT-------YESLLLLCDLCDTASHTYCVGMG----NAVPEGDWFCHDCT 143 (673)
Q Consensus 97 ~~CsVC~~~d-------~ee~LL~CD~Cd~afH~~CL~pp----~~VP~gdW~Cp~Cr 143 (673)
..|.+|...+ +.+.|++|+.|++.||.+||++. ..++.+.|+|+.|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 4688997654 24589999999999999999976 24778999999985
No 116
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.20 E-value=3.7e-05 Score=73.37 Aligned_cols=51 Identities=24% Similarity=0.596 Sum_probs=39.9
Q ss_pred cccccccccCCCC-ccccccccccccccccccccCCC--CCCCCCccCcCCCCcc
Q 005857 95 AYVRCNVCQGTTY-ESLLLLCDLCDTASHTYCVGMGN--AVPEGDWFCHDCTVLR 146 (673)
Q Consensus 95 e~~~CsVC~~~d~-ee~LL~CD~Cd~afH~~CL~pp~--~VP~gdW~Cp~Cr~~~ 146 (673)
....| +|+...+ .+.|+.||.|+.|||..|+++.. ....+.|+|+.|+...
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchh
Confidence 34679 9988643 56799999999999999999752 1235789999998654
No 117
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=97.20 E-value=4.8e-05 Score=70.84 Aligned_cols=48 Identities=23% Similarity=0.620 Sum_probs=39.5
Q ss_pred ccccccccCCCCccccccccccccccccccccCC------CCC--CCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG------NAV--PEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp------~~V--P~gdW~Cp~Cr~~~ 146 (673)
...|.+|.+++ .+++||.|+++||..|+.++ .++ |.++|+|..|....
T Consensus 57 ~~~C~vC~dGG---~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~p 112 (129)
T 3ql9_A 57 DEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPEP 112 (129)
T ss_dssp BSSCTTTCCCS---EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCGG
T ss_pred CCcCeecCCCC---eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCHH
Confidence 35799999874 68899999999999999964 133 78999999997643
No 118
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.16 E-value=3.2e-05 Score=63.84 Aligned_cols=48 Identities=27% Similarity=0.704 Sum_probs=38.5
Q ss_pred ccccccccCCC-Ccccccccc-ccccccccccccCCC-------CCCCCCccCcCCC
Q 005857 96 YVRCNVCQGTT-YESLLLLCD-LCDTASHTYCVGMGN-------AVPEGDWFCHDCT 143 (673)
Q Consensus 96 ~~~CsVC~~~d-~ee~LL~CD-~Cd~afH~~CL~pp~-------~VP~gdW~Cp~Cr 143 (673)
...|.+|.... +...++.|| .|..+||..|+++.. .-|.+.|+|+.|.
T Consensus 8 ~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 8 VYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp -CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred cCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 35799999863 456799999 999999999999862 1367799999985
No 119
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=97.16 E-value=3.8e-05 Score=68.80 Aligned_cols=51 Identities=24% Similarity=0.627 Sum_probs=39.7
Q ss_pred cccccccCCC-Ccccccccc-ccccccccccccCCC----C---CCCCCccCcCCCCccc
Q 005857 97 VRCNVCQGTT-YESLLLLCD-LCDTASHTYCVGMGN----A---VPEGDWFCHDCTVLRD 147 (673)
Q Consensus 97 ~~CsVC~~~d-~ee~LL~CD-~Cd~afH~~CL~pp~----~---VP~gdW~Cp~Cr~~~~ 147 (673)
..|.+|...- +.+.|+.|+ .|+.|||..|+++.. . .|...|+|+.|.....
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~~ 63 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTKE 63 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcCC
Confidence 4689998872 334688897 999999999999862 1 3668899999987543
No 120
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=97.12 E-value=7.9e-05 Score=58.60 Aligned_cols=47 Identities=28% Similarity=0.612 Sum_probs=35.7
Q ss_pred cccccccCCCC-cccccccc-ccccccccccccCCC-CCCCCCccCcCCC
Q 005857 97 VRCNVCQGTTY-ESLLLLCD-LCDTASHTYCVGMGN-AVPEGDWFCHDCT 143 (673)
Q Consensus 97 ~~CsVC~~~d~-ee~LL~CD-~Cd~afH~~CL~pp~-~VP~gdW~Cp~Cr 143 (673)
..|.+|....+ ...|+.|| .|+.+||..|+++.. .....+|+|+.|+
T Consensus 3 c~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 3 CAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp CSCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred ccCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 45778887753 46799999 899999999999862 1123789999995
No 121
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=97.01 E-value=0.00011 Score=61.84 Aligned_cols=50 Identities=28% Similarity=0.674 Sum_probs=38.3
Q ss_pred ccccccccCCCC-ccccccccccccccccccccCCCC-CCC-CCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTY-ESLLLLCDLCDTASHTYCVGMGNA-VPE-GDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~-ee~LL~CD~Cd~afH~~CL~pp~~-VP~-gdW~Cp~Cr~~~ 146 (673)
..+| +|+...+ ...|+.|+.|..+||..|+++... ++. ..|+|+.|....
T Consensus 10 ~~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~ 62 (75)
T 3kqi_A 10 PVYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTH 62 (75)
T ss_dssp CEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHH
T ss_pred eeEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccC
Confidence 3567 7987643 568999999999999999998732 222 579999997653
No 122
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=96.49 E-value=0.00093 Score=60.29 Aligned_cols=82 Identities=16% Similarity=0.363 Sum_probs=54.9
Q ss_pred CCCcccccccccccccCCCcEec--cCCCccCHhHHHHH--HHhcCCCCCCccccccccCCCCCCCCCcceeeeeccccc
Q 005857 3 GLHSRSCGICLMDEGKSIRGQID--SCDHYFCFVCIMEW--AKIESKCPMCKRRFTSIRRPPKDGVFPRERFVVVPKRDQ 78 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~~~~~Ld--~CgH~FC~~CI~eW--sk~k~sCPlCRkeFt~I~~~~vdG~f~nErLv~VpeRdQ 78 (673)
..+++.|.||.+. ..+...+ .|...||+.|+..- -+..+.||.
T Consensus 12 ~~~~~~C~~C~~~---G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g~W~Cp~------------------------------ 58 (107)
T 4gne_A 12 QMHEDYCFQCGDG---GELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPW------------------------------ 58 (107)
T ss_dssp CSSCSSCTTTCCC---SEEEECCSTTCCCEECTGGGTCSSCCSSCCCCGG------------------------------
T ss_pred CCCCCCCCcCCCC---CcEeEECCCCCCcccccccCcCCcCCCCCEECCC------------------------------
Confidence 4567889999963 3455666 68889999887400 001122222
Q ss_pred ccccccccccCCCCcccccccccccCCCCccccccccccccccccccccCC-CCCCCCCccC
Q 005857 79 IYGGFGIASSRTADPYAYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFC 139 (673)
Q Consensus 79 vyepseEEs~~eeDp~e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~C 139 (673)
-.|.+|+... .+.|..|+.+||..|+... ..-+...|+|
T Consensus 59 ------------------c~C~~C~k~~----~~~C~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 59 ------------------HQCDECSSAA----VSFCEFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp ------------------GBCTTTCSBC----CEECSSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred ------------------CCCCcCCCCC----CcCcCCCCcchhhhccCCcceecCCCCcee
Confidence 2466777653 3789999999999999876 3456677997
No 123
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=96.12 E-value=0.0011 Score=64.85 Aligned_cols=52 Identities=23% Similarity=0.593 Sum_probs=38.9
Q ss_pred cccccccCCCCcc----ccccccccccccccccccCCC-------CCCC-CCccCcCCCCcccc
Q 005857 97 VRCNVCQGTTYES----LLLLCDLCDTASHTYCVGMGN-------AVPE-GDWFCHDCTVLRDE 148 (673)
Q Consensus 97 ~~CsVC~~~d~ee----~LL~CD~Cd~afH~~CL~pp~-------~VP~-gdW~Cp~Cr~~~~e 148 (673)
..|.+|+..-+++ .|+.||.|+.|||..|+++.. .+|+ ..|+|+.|+.....
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 3588998764333 499999999999999999762 1232 37999999986543
No 124
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=95.87 E-value=0.0039 Score=63.05 Aligned_cols=48 Identities=17% Similarity=0.536 Sum_probs=38.0
Q ss_pred cccccccccccccCCCcEeccCCCccCHhHHHHHHHhc--CCCCCCcccccc
Q 005857 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIE--SKCPMCKRRFTS 55 (673)
Q Consensus 6 d~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k--~sCPlCRkeFt~ 55 (673)
-..|.||.+.+..+ ..+..|+|.||..|+..|.+.. ..||.|+..+..
T Consensus 180 i~~C~iC~~iv~~g--~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~ 229 (238)
T 3nw0_A 180 VKICNICHSLLIQG--QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 229 (238)
T ss_dssp CCBCTTTCSBCSSC--EECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCS
T ss_pred CCcCcchhhHHhCC--cccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Confidence 46899999988532 3455599999999999998764 489999987544
No 125
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=95.86 E-value=0.0047 Score=53.42 Aligned_cols=35 Identities=17% Similarity=0.426 Sum_probs=27.0
Q ss_pred CcccccccccccccCCCcEeccCCCccCHhHHHHH
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEW 39 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eW 39 (673)
++..|+||++.+........+.|+|.||..|+..+
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~~ 36 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKAT 36 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETTTTEEECHHHHHHH
T ss_pred CCCCCcCCCCCCCCCceEECCcCChHHhHHHCHHH
Confidence 56899999986423334455889999999999983
No 126
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=95.44 E-value=0.0016 Score=72.33 Aligned_cols=52 Identities=29% Similarity=0.664 Sum_probs=39.5
Q ss_pred ccccccccccCCC-CccccccccccccccccccccCCCC-CC-CCCccCcCCCCcc
Q 005857 94 YAYVRCNVCQGTT-YESLLLLCDLCDTASHTYCVGMGNA-VP-EGDWFCHDCTVLR 146 (673)
Q Consensus 94 ~e~~~CsVC~~~d-~ee~LL~CD~Cd~afH~~CL~pp~~-VP-~gdW~Cp~Cr~~~ 146 (673)
.....| +|+... ..+.|+.||.|+.|||..|+++... .. ...|+|+.|....
T Consensus 35 ~~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 35 PPPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp CCCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHH
T ss_pred CCCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCCc
Confidence 344678 898764 3678999999999999999998622 12 2579999997654
No 127
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=95.20 E-value=0.006 Score=68.16 Aligned_cols=39 Identities=26% Similarity=0.543 Sum_probs=30.8
Q ss_pred ccccccccccccccccccccCCCC--CCCCCccCcCCCCcc
Q 005857 108 ESLLLLCDLCDTASHTYCVGMGNA--VPEGDWFCHDCTVLR 146 (673)
Q Consensus 108 ee~LL~CD~Cd~afH~~CL~pp~~--VP~gdW~Cp~Cr~~~ 146 (673)
...|+.||.|+.|||..|+++... -....|+||.|....
T Consensus 55 ~~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~~ 95 (528)
T 3pur_A 55 DFQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPHT 95 (528)
T ss_dssp TTSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHHH
T ss_pred CCCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCCC
Confidence 357899999999999999998622 223679999997643
No 128
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=95.08 E-value=0.011 Score=51.43 Aligned_cols=49 Identities=31% Similarity=0.606 Sum_probs=37.5
Q ss_pred ccccccccCCCCccccccccccccccccccccCC-------------CCCCCCCccCcCCCCc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-------------NAVPEGDWFCHDCTVL 145 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-------------~~VP~gdW~Cp~Cr~~ 145 (673)
...|.||..-.. +.++-|..|++.||..||..+ ...++.-|.|+.|...
T Consensus 15 D~~C~VC~~~t~-~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 15 DEMCDVCEVWTA-ESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp SCCCTTTCCCCS-SCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CcccCccccccc-cceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 367999986654 468889999999999999852 1224567999999653
No 129
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=94.73 E-value=0.0026 Score=69.89 Aligned_cols=49 Identities=29% Similarity=0.703 Sum_probs=37.6
Q ss_pred cccccccCCCC-ccccccccccccccccccccCCCC-C-CCCCccCcCCCCcc
Q 005857 97 VRCNVCQGTTY-ESLLLLCDLCDTASHTYCVGMGNA-V-PEGDWFCHDCTVLR 146 (673)
Q Consensus 97 ~~CsVC~~~d~-ee~LL~CD~Cd~afH~~CL~pp~~-V-P~gdW~Cp~Cr~~~ 146 (673)
..| +|+...+ .+.|+.||.|+.|||..|+++... . ....|+|+.|....
T Consensus 6 ~yC-iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~ 57 (447)
T 3kv4_A 6 VYC-LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLH 57 (447)
T ss_dssp EET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHH
T ss_pred eEE-eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCcccc
Confidence 456 8987643 578999999999999999997621 1 22679999997654
No 130
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=92.83 E-value=0.049 Score=44.95 Aligned_cols=44 Identities=18% Similarity=0.441 Sum_probs=35.4
Q ss_pred cccccccccccccCCCcEeccCCCccCHhHHHHHHH----hcCCCCCCccc
Q 005857 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAK----IESKCPMCKRR 52 (673)
Q Consensus 6 d~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk----~k~sCPlCRke 52 (673)
...|.||.+. ..+...+.|...||..|+.+.+. ..+.||.|...
T Consensus 12 ~~~C~vC~~~---~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 12 GARCGVCGDG---TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp TCCCTTTSCC---TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCCcCCCCCC---CeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 4679999873 45678899999999999987653 36899999765
No 131
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=92.31 E-value=0.046 Score=48.77 Aligned_cols=38 Identities=26% Similarity=0.639 Sum_probs=28.2
Q ss_pred ccccccccccccccccccccCC-CCCCC----CCccCcCCCCc
Q 005857 108 ESLLLLCDLCDTASHTYCVGMG-NAVPE----GDWFCHDCTVL 145 (673)
Q Consensus 108 ee~LL~CD~Cd~afH~~CL~pp-~~VP~----gdW~Cp~Cr~~ 145 (673)
+..|+.|+.|+.+||..|+++. ..++. ..|+|+.|...
T Consensus 72 ~~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 72 EKKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp GGSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred CcceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 4458899999999999999976 22222 34999999864
No 132
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=91.95 E-value=0.026 Score=46.93 Aligned_cols=51 Identities=22% Similarity=0.453 Sum_probs=37.8
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHH----hcCCCCCCccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAK----IESKCPMCKRRFT 54 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk----~k~sCPlCRkeFt 54 (673)
.+...|+||............+.|..+||..|+..-.. ..+.||.|...+.
T Consensus 16 ~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 16 NQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp CEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred CCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 34567999998764335677889999999999975432 3688999976543
No 133
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=91.56 E-value=0.062 Score=47.65 Aligned_cols=50 Identities=24% Similarity=0.776 Sum_probs=40.4
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCCcccccccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlCRkeFt~I~ 57 (673)
..-..|-.|+-.+ ++++.+..|++|..|+...+.+..+||+|++++..-.
T Consensus 26 ~G~~nCKsCWf~~----k~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl 75 (99)
T 2ko5_A 26 LGPQFCKSCWFEN----KGLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKL 75 (99)
T ss_dssp SCCCCCCSSCSCC----SSEEECSSCEEEHHHHHHTCSSSSEETTTTEECCCCS
T ss_pred cCcccChhhcccc----CCeeeecchhhHHHHHHHHHhhccCCcccCCcCCcce
Confidence 3446799999744 3688778999999999999999999999998865433
No 134
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=91.17 E-value=0.059 Score=43.49 Aligned_cols=48 Identities=23% Similarity=0.492 Sum_probs=37.4
Q ss_pred CCCCcccccccccccccCCCcEeccCCCccCHhHHHHHH----HhcCCCCCCccc
Q 005857 2 EGLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKRR 52 (673)
Q Consensus 2 e~~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRke 52 (673)
+..++..|.||.+. ..+...+.|...||..|+..-+ +..+.||.|.+.
T Consensus 7 ~~~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 7 ETDHQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SSCCCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred cCCCCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 34567889999973 4567788999999999998743 346899999754
No 135
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=90.42 E-value=0.08 Score=40.81 Aligned_cols=44 Identities=23% Similarity=0.531 Sum_probs=34.4
Q ss_pred cccccccccccCCCcEeccCCCccCHhHHHHHH----HhcCCCCCCcc
Q 005857 8 SCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKR 51 (673)
Q Consensus 8 ~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRk 51 (673)
.|.||........+...+.|...||..|+.+-+ +..+.||.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 599999865445677889999999999997533 23688999964
No 136
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=89.58 E-value=0.11 Score=46.09 Aligned_cols=36 Identities=25% Similarity=0.687 Sum_probs=29.1
Q ss_pred cccccccccccccccccCC-------CCCC-CCCccCcCCCCcc
Q 005857 111 LLLCDLCDTASHTYCVGMG-------NAVP-EGDWFCHDCTVLR 146 (673)
Q Consensus 111 LL~CD~Cd~afH~~CL~pp-------~~VP-~gdW~Cp~Cr~~~ 146 (673)
|+.||.|+.|||..|+++. ..+| ...|.|+.|....
T Consensus 2 mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~ 45 (140)
T 2ku7_A 2 MMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 45 (140)
T ss_dssp CCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTS
T ss_pred ccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccc
Confidence 7899999999999999875 2445 3469999998653
No 137
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=88.84 E-value=0.074 Score=42.90 Aligned_cols=47 Identities=21% Similarity=0.367 Sum_probs=36.0
Q ss_pred CCCcccccccccccccCCCcEeccCCCccCHhHHHHHH----HhcCCCCCCccc
Q 005857 3 GLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKRR 52 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRke 52 (673)
...+..|.||.+. ..+...+.|...||..|+.+-+ +..+.||.|...
T Consensus 6 d~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 6 DHHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp CSSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred cCCCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 3456789999873 4567888899999999998543 336899999754
No 138
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=87.96 E-value=0.051 Score=43.79 Aligned_cols=51 Identities=24% Similarity=0.450 Sum_probs=37.2
Q ss_pred CCCCcccccccccccc-cCCCcEeccCCCccCHhHHHHHHH-----hcCCCCCCccc
Q 005857 2 EGLHSRSCGICLMDEG-KSIRGQIDSCDHYFCFVCIMEWAK-----IESKCPMCKRR 52 (673)
Q Consensus 2 e~~Ed~~CpICLE~f~-~~~~~~Ld~CgH~FC~~CI~eWsk-----~k~sCPlCRke 52 (673)
++.+...|+||...+. .......+.|..+||..|+.--.. ..+.||.|+..
T Consensus 2 s~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 2 SSGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp CCSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 3567789999998874 234456788999999999854321 35789999754
No 139
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=87.16 E-value=0.33 Score=45.77 Aligned_cols=46 Identities=22% Similarity=0.411 Sum_probs=35.9
Q ss_pred CCCcccccccccccccCCCcEeccCCCccCHhHHHHHH-----------HhcCCCCCCcc
Q 005857 3 GLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA-----------KIESKCPMCKR 51 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs-----------k~k~sCPlCRk 51 (673)
...++.|.||.+. .++...+.|...||..||.+-+ ...|.||.|..
T Consensus 60 Dg~~d~C~vC~~G---G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 60 DGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp TSCBCSCSSSCCC---SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCCeecccCCC---CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 3456899999984 4567788999999999998532 23689999974
No 140
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=87.14 E-value=0.12 Score=49.74 Aligned_cols=46 Identities=17% Similarity=0.365 Sum_probs=36.2
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHH----HhcCCCCCCccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKRR 52 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRke 52 (673)
..++.|.||.+. +....++.|...||..|+.+.+ +..|.||.|+..
T Consensus 2 ~~~~~C~~C~~~---g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~ 51 (184)
T 3o36_A 2 PNEDWCAVCQNG---GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDL 51 (184)
T ss_dssp CSCSSCTTTCCC---SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCCCccccCCCC---CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCc
Confidence 356889999974 4567889999999999987654 336899999754
No 141
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=87.06 E-value=0.055 Score=44.22 Aligned_cols=47 Identities=17% Similarity=0.369 Sum_probs=36.6
Q ss_pred CCCCcccccccccccccCCCcEeccCCCccCHhHHHHHH----HhcCCCCCCcc
Q 005857 2 EGLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKR 51 (673)
Q Consensus 2 e~~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRk 51 (673)
....+..|.||.+. ..+...+.|...||..|+.+-+ +..+.||.|..
T Consensus 4 ~~~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 4 AQKNEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp CCSCCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccC
Confidence 34567899999974 4567888999999999998533 34688999964
No 142
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=86.74 E-value=0.1 Score=51.14 Aligned_cols=47 Identities=15% Similarity=0.341 Sum_probs=36.6
Q ss_pred CCCcccccccccccccCCCcEeccCCCccCHhHHHHHH----HhcCCCCCCccc
Q 005857 3 GLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKRR 52 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRke 52 (673)
...++.|.||.... ....++.|...||..|+.+.+ +..|.||.|+..
T Consensus 4 d~~~~~C~~C~~~g---~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~ 54 (207)
T 3u5n_A 4 DPNEDWCAVCQNGG---DLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDI 54 (207)
T ss_dssp CSSCSSBTTTCCCE---EEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCS
T ss_pred CCCCCCCCCCCCCC---ceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCc
Confidence 34568899999743 467788999999999997654 336899999754
No 143
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.27 E-value=0.059 Score=47.00 Aligned_cols=50 Identities=20% Similarity=0.423 Sum_probs=38.6
Q ss_pred CCCcccccccccccccCCCcEeccCCCccCHhHHHHHH----HhcCCCCCCccc
Q 005857 3 GLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKRR 52 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRke 52 (673)
..++..|.||........+...+.|...||..|+.+-+ +..+.||.|...
T Consensus 13 ~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 13 FIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred ccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 34567899999876545678889999999999997433 336899999754
No 144
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=85.76 E-value=0.11 Score=45.08 Aligned_cols=49 Identities=18% Similarity=0.264 Sum_probs=37.0
Q ss_pred CCccccccccccc--ccCCCcEeccCCCccCHhHHHHHH--HhcCCCCCCccc
Q 005857 4 LHSRSCGICLMDE--GKSIRGQIDSCDHYFCFVCIMEWA--KIESKCPMCKRR 52 (673)
Q Consensus 4 ~Ed~~CpICLE~f--~~~~~~~Ld~CgH~FC~~CI~eWs--k~k~sCPlCRke 52 (673)
.++..|.||.... ....+..++.|.-.||+.|+..-. +..|.||.|...
T Consensus 23 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 23 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCc
Confidence 4568999999754 233557788899999999997542 346899999754
No 145
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.51 E-value=0.061 Score=42.51 Aligned_cols=46 Identities=22% Similarity=0.428 Sum_probs=35.1
Q ss_pred CCCcccccccccccccCCCcEeccCCCccCHhHHHHHH----HhcCCCCCCcc
Q 005857 3 GLHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKR 51 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRk 51 (673)
..++..|.||.+. ..+...+.|...||..|+.+-+ +..+.||.|..
T Consensus 6 ~~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 6 SGHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CSSCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 3456889999984 4567888999999999998543 23578988854
No 146
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=85.42 E-value=0.19 Score=43.90 Aligned_cols=46 Identities=17% Similarity=0.379 Sum_probs=36.2
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHH----HhcCCCCCCccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKRR 52 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRke 52 (673)
..+..|.||.+. ..+...+.|...||..|+.+-+ +..|.||.|...
T Consensus 23 ~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 23 DSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 456789999974 3567888999999999997654 336899999753
No 147
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=85.19 E-value=0.11 Score=43.35 Aligned_cols=50 Identities=18% Similarity=0.229 Sum_probs=37.4
Q ss_pred CCCccccccccccc--ccCCCcEeccCCCccCHhHHHHHH--HhcCCCCCCccc
Q 005857 3 GLHSRSCGICLMDE--GKSIRGQIDSCDHYFCFVCIMEWA--KIESKCPMCKRR 52 (673)
Q Consensus 3 ~~Ed~~CpICLE~f--~~~~~~~Ld~CgH~FC~~CI~eWs--k~k~sCPlCRke 52 (673)
..++..|.||.+.. ....+...+.|...||..|+..-. +..+.||.|...
T Consensus 13 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 13 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 66 (71)
T ss_dssp CCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcCc
Confidence 45678999999764 234567788999999999997532 346889999653
No 148
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=85.13 E-value=0.18 Score=44.38 Aligned_cols=46 Identities=20% Similarity=0.354 Sum_probs=34.1
Q ss_pred cccccccccccccCCCcEeccCCCccCHhHHHHHHH---hcCCCCCCccc
Q 005857 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAK---IESKCPMCKRR 52 (673)
Q Consensus 6 d~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk---~k~sCPlCRke 52 (673)
...| ||...........++.|..+||..|+..-.. ..+.||.|+..
T Consensus 28 ~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~~ 76 (98)
T 2lv9_A 28 VTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQPR 76 (98)
T ss_dssp BCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSSS
T ss_pred CEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcCC
Confidence 3568 8987765566677889999999999865322 25799999743
No 149
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=84.76 E-value=1.3 Score=38.99 Aligned_cols=55 Identities=25% Similarity=0.535 Sum_probs=41.5
Q ss_pred CCCcccccccccccccC----CCcEeccCCCccCHhHHHH-HHHhcCCCCCCcccccccc
Q 005857 3 GLHSRSCGICLMDEGKS----IRGQIDSCDHYFCFVCIME-WAKIESKCPMCKRRFTSIR 57 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~----~~~~Ld~CgH~FC~~CI~e-Wsk~k~sCPlCRkeFt~I~ 57 (673)
......|.||-+.+.-. ....+.-|.--.|..|.+- ..+....||.|+.+|....
T Consensus 13 ~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr~k 72 (93)
T 1weo_A 13 NLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLR 72 (93)
T ss_dssp CCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCT
T ss_pred ccCCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCcccccc
Confidence 34567999999986422 3345677999999999975 4456789999999987654
No 150
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=84.37 E-value=0.48 Score=44.01 Aligned_cols=45 Identities=22% Similarity=0.428 Sum_probs=34.2
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHH------H-----HhcCCCCCCcc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEW------A-----KIESKCPMCKR 51 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eW------s-----k~k~sCPlCRk 51 (673)
..+..|.||.+.. .....+.|...||..||.+- . ...|.|+.|..
T Consensus 55 g~~~~C~vC~dGG---~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 55 GMDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp SCBSSCTTTCCCS---EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCcCeecCCCC---eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 4557899999843 45667889999999999863 1 23589999964
No 151
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=82.60 E-value=0.12 Score=41.71 Aligned_cols=50 Identities=18% Similarity=0.273 Sum_probs=37.3
Q ss_pred CCCcccccccccccc--cCCCcEeccCCCccCHhHHHHHH-------HhcCCCCCCccc
Q 005857 3 GLHSRSCGICLMDEG--KSIRGQIDSCDHYFCFVCIMEWA-------KIESKCPMCKRR 52 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~--~~~~~~Ld~CgH~FC~~CI~eWs-------k~k~sCPlCRke 52 (673)
..++..|.||..... ...+...+.|...||..|+.+-+ +..+.||.|...
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 456789999998642 24567788899999999987522 346899999654
No 152
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=82.30 E-value=1.1 Score=36.22 Aligned_cols=48 Identities=19% Similarity=0.195 Sum_probs=31.1
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|...-.....+.-..|+..||..|+..- -.....||.|+...
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~---~~~~~~CP~Cr~~~ 62 (78)
T 2ect_A 15 GLECPVCKEDYALGESVRQLPCNHLFHDSCIVPW---LEQHDSCPVCRKSL 62 (78)
T ss_dssp SCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHH---HTTTCSCTTTCCCC
T ss_pred CCCCeeCCccccCCCCEEEeCCCCeecHHHHHHH---HHcCCcCcCcCCcc
Confidence 4679999876433322222358889999999732 11235799999754
No 153
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=81.48 E-value=0.35 Score=42.36 Aligned_cols=46 Identities=22% Similarity=0.509 Sum_probs=32.8
Q ss_pred CcccccccccccccCCCcEecc--CC-CccCHhHHHHHH--HhcCCCCCCccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDS--CD-HYFCFVCIMEWA--KIESKCPMCKRR 52 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~--Cg-H~FC~~CI~eWs--k~k~sCPlCRke 52 (673)
+...| ||.... ......++. |. .+||+.|+.--. ..++.||.|+..
T Consensus 35 e~~yC-iC~~~~-~g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~ 85 (91)
T 1weu_A 35 EPTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 85 (91)
T ss_dssp CCBCS-TTCCBC-CSCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCC
T ss_pred CCcEE-ECCCCC-CCCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCc
Confidence 45678 999865 345566777 66 799999986321 236899999754
No 154
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=80.78 E-value=0.18 Score=40.33 Aligned_cols=46 Identities=22% Similarity=0.488 Sum_probs=35.8
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHH----HhcCCCCCCccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKRR 52 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRke 52 (673)
..+..|.||... ..+...+.|...||..|+.+-+ +..+.||.|...
T Consensus 3 ~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 3 IHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 457899999984 4667888999999999998543 236889999654
No 155
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=80.62 E-value=0.73 Score=38.69 Aligned_cols=50 Identities=20% Similarity=0.399 Sum_probs=35.7
Q ss_pred CCCcccccccccccc-cCCCcEeccCCCccCHhHHHHHHH-----hcCCCCCCcccc
Q 005857 3 GLHSRSCGICLMDEG-KSIRGQIDSCDHYFCFVCIMEWAK-----IESKCPMCKRRF 53 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~-~~~~~~Ld~CgH~FC~~CI~eWsk-----~k~sCPlCRkeF 53 (673)
..+...| ||...+. ......++.|..+||..|+.--.. ..+.||.|+...
T Consensus 9 ~~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 9 ALVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred cCCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 3455678 9998774 344566788999999999853221 357899998653
No 156
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=79.31 E-value=0.39 Score=46.74 Aligned_cols=44 Identities=18% Similarity=0.428 Sum_probs=34.9
Q ss_pred cccccccccccccCCCcEeccCCCccCHhHHHHHH----HhcCCCCCCccc
Q 005857 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKRR 52 (673)
Q Consensus 6 d~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRke 52 (673)
++.|.+|.+. +....++.|...||..|+.+-+ +..|.||.|+..
T Consensus 2 ~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCC---SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCCC---CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 5789999974 3567888999999999997643 346899999754
No 157
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=78.42 E-value=1.1 Score=33.81 Aligned_cols=46 Identities=24% Similarity=0.420 Sum_probs=30.3
Q ss_pred cccccccCCCCccc-cccccccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 97 VRCNVCQGTTYESL-LLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 97 ~~CsVC~~~d~ee~-LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
..|.+|.+.-..+. ......|+..||..|+..- -.....||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w---~~~~~~CP~Cr~~ 52 (55)
T 1iym_A 6 VECAVCLAELEDGEEARFLPRCGHGFHAECVDMW---LGSHSTCPLCRLT 52 (55)
T ss_dssp CCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHT---TTTCCSCSSSCCC
T ss_pred CcCccCCccccCCCceEECCCCCCcccHHHHHHH---HHcCCcCcCCCCE
Confidence 56999987643322 2333368999999999742 1234679999864
No 158
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=78.18 E-value=0.58 Score=45.70 Aligned_cols=48 Identities=19% Similarity=0.310 Sum_probs=35.2
Q ss_pred ccccccccccccCC----CcEeccCCCccCHhHHHHH------HH-----hcCCCCCCccccc
Q 005857 7 RSCGICLMDEGKSI----RGQIDSCDHYFCFVCIMEW------AK-----IESKCPMCKRRFT 54 (673)
Q Consensus 7 ~~CpICLE~f~~~~----~~~Ld~CgH~FC~~CI~eW------sk-----~k~sCPlCRkeFt 54 (673)
..|+||...+.+.. ...++.|..+||..|+..- .+ ....||.|+....
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 57999999886543 4567889999999996321 11 2579999987643
No 159
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=77.84 E-value=0.32 Score=39.90 Aligned_cols=47 Identities=21% Similarity=0.388 Sum_probs=31.8
Q ss_pred CCccccccccccccc-CCCcEec-cCCCccCHhHHHHHH---H-------hcCCCCCCc
Q 005857 4 LHSRSCGICLMDEGK-SIRGQID-SCDHYFCFVCIMEWA---K-------IESKCPMCK 50 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~-~~~~~Ld-~CgH~FC~~CI~eWs---k-------~k~sCPlCR 50 (673)
.....|++|...+.+ ......+ .|..+||+.|+.--. + ..+.||.|.
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 345689999998753 3445678 899999999974211 1 157898885
No 160
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=77.46 E-value=0.45 Score=39.57 Aligned_cols=46 Identities=22% Similarity=0.418 Sum_probs=33.6
Q ss_pred cccccccccccccCCCcEeccCCCccCHhHHHHHH---------HhcCCCCCCccc
Q 005857 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA---------KIESKCPMCKRR 52 (673)
Q Consensus 6 d~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs---------k~k~sCPlCRke 52 (673)
...| ||............+.|..+||..|+.--. ...+.||.|+..
T Consensus 16 ~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 16 ALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 4678 899877544556678899999999984211 236889999754
No 161
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=76.43 E-value=2.6 Score=36.49 Aligned_cols=47 Identities=30% Similarity=0.424 Sum_probs=32.2
Q ss_pred CCcccccccccccccCCCcEe-ccCCCccCHhHHHHHHHh-----cCCCCCCc
Q 005857 4 LHSRSCGICLMDEGKSIRGQI-DSCDHYFCFVCIMEWAKI-----ESKCPMCK 50 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~L-d~CgH~FC~~CI~eWsk~-----k~sCPlCR 50 (673)
...+.|.+|.+.+++.-...+ ..=.|.|||-|-+...+. +.+||.=+
T Consensus 13 ~a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sIk~q~~~~EvyCPSG~ 65 (93)
T 2cs3_A 13 SGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKAQGATGEVYCPSGE 65 (93)
T ss_dssp CCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHHHHSSSCCCCTTSS
T ss_pred CCeeEeecchhhhccCceeeCCCccCCeeeccccHHHHHhcCCCCcEECCCCC
Confidence 345789999999976433322 224899999998876654 45677543
No 162
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=75.40 E-value=0.72 Score=36.56 Aligned_cols=48 Identities=21% Similarity=0.214 Sum_probs=30.5
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|...-.....+....|+..||..|+..- -.....||.|+..-
T Consensus 14 ~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~---~~~~~~CP~Cr~~~ 61 (69)
T 2kiz_A 14 EEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQW---LITNKKCPICRVDI 61 (69)
T ss_dssp CCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHH---HHHCSBCTTTCSBS
T ss_pred CCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHH---HHcCCCCcCcCccc
Confidence 3679999765432223344568999999999732 01123599998753
No 163
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=75.24 E-value=0.51 Score=39.29 Aligned_cols=47 Identities=21% Similarity=0.477 Sum_probs=32.3
Q ss_pred CCcccccccccccccCCCcEecc--CC-CccCHhHHHHHH--HhcCCCCCCccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDS--CD-HYFCFVCIMEWA--KIESKCPMCKRR 52 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~--Cg-H~FC~~CI~eWs--k~k~sCPlCRke 52 (673)
.+...| ||.... .......+. |. .+||+.|+.--. ...+.||.|+..
T Consensus 14 ~~~~~C-~C~~~~-~g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~ 65 (71)
T 1wen_A 14 NEPTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQE 65 (71)
T ss_dssp TSCCCS-TTCCCS-CSSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSC
T ss_pred CCCCEE-ECCCCC-CCCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCcc
Confidence 345678 899865 234555677 66 799999986321 246899999754
No 164
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=74.11 E-value=0.49 Score=39.23 Aligned_cols=45 Identities=24% Similarity=0.494 Sum_probs=31.9
Q ss_pred cccccccccccCCCcEeccCCCccCHhHHHHHH----Hh-cCCCCCCccc
Q 005857 8 SCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KI-ESKCPMCKRR 52 (673)
Q Consensus 8 ~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~-k~sCPlCRke 52 (673)
.|.||...-....+...+.|...||..|+.+-+ +. .+.||.|...
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 456777543344566778899999999998533 33 6889999753
No 165
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=73.81 E-value=2.3 Score=41.52 Aligned_cols=50 Identities=14% Similarity=0.299 Sum_probs=32.2
Q ss_pred ccccccCCCC-ccccccccccccccccccccCC--CCCCC---CCccCcCCCCcccc
Q 005857 98 RCNVCQGTTY-ESLLLLCDLCDTASHTYCVGMG--NAVPE---GDWFCHDCTVLRDE 148 (673)
Q Consensus 98 ~CsVC~~~d~-ee~LL~CD~Cd~afH~~CL~pp--~~VP~---gdW~Cp~Cr~~~~e 148 (673)
.| -|+..++ ...++.|..|..+||..|+... .-+|- ....|..|.....|
T Consensus 7 yC-YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g~E 62 (177)
T 3rsn_A 7 SV-DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSGNT 62 (177)
T ss_dssp -----CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTSSC
T ss_pred EE-EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCCcc
Confidence 45 4776543 4569999999999999999854 22441 12449999876533
No 166
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=73.75 E-value=0.32 Score=43.30 Aligned_cols=47 Identities=19% Similarity=0.372 Sum_probs=33.7
Q ss_pred cccccccccccc-CCCcEec-cCCCccCHhHHHHH---H-------HhcCCCCCCcccc
Q 005857 7 RSCGICLMDEGK-SIRGQID-SCDHYFCFVCIMEW---A-------KIESKCPMCKRRF 53 (673)
Q Consensus 7 ~~CpICLE~f~~-~~~~~Ld-~CgH~FC~~CI~eW---s-------k~k~sCPlCRkeF 53 (673)
..|+||...+.+ .....++ .|..+||+.|+.-- . +..+.||.|+...
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 579999998743 3345566 89999999996421 1 1468999998753
No 167
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=73.68 E-value=0.4 Score=40.65 Aligned_cols=44 Identities=23% Similarity=0.501 Sum_probs=30.3
Q ss_pred cccccccccccCCCcEeccCCCccCHhHHHHHHH----hc-CCCCCCcc
Q 005857 8 SCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAK----IE-SKCPMCKR 51 (673)
Q Consensus 8 ~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk----~k-~sCPlCRk 51 (673)
.|.||...-....+...+.|...||+.|+.+-+. .. +.||.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 3666665544445567788999999999986542 24 88999974
No 168
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.53 E-value=1.5 Score=34.95 Aligned_cols=48 Identities=17% Similarity=0.313 Sum_probs=32.2
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|.+.-....++ .|+..||..|+............||.|+...
T Consensus 20 ~~~C~IC~~~~~~~~~~---~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 67 (73)
T 2ysl_A 20 EVICPICLDILQKPVTI---DCGHNFCLKCITQIGETSCGFFKCPLCKTSV 67 (73)
T ss_dssp CCBCTTTCSBCSSEEEC---TTCCEEEHHHHHHHCSSSCSCCCCSSSCCCC
T ss_pred CCEeccCCcccCCeEEc---CCCChhhHHHHHHHHHcCCCCCCCCCCCCcC
Confidence 46799998765443333 7888899999974311112456799999754
No 169
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.48 E-value=0.51 Score=38.24 Aligned_cols=48 Identities=23% Similarity=0.325 Sum_probs=31.7
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|...-.....+....|+..||..|+..- -.....||.|+..-
T Consensus 23 ~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w---~~~~~~CP~Cr~~~ 70 (75)
T 1x4j_A 23 QTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKW---LKANRTCPICRADS 70 (75)
T ss_dssp CCEETTTTEECCBTCEEEEETTTEEEETTHHHHH---HHHCSSCTTTCCCC
T ss_pred CCCCeECCcccCCCCeEEEECCCCHhHHHHHHHH---HHcCCcCcCcCCcC
Confidence 3579999866443333444569999999999732 01124699998653
No 170
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=73.35 E-value=2.4 Score=36.98 Aligned_cols=47 Identities=15% Similarity=0.331 Sum_probs=32.7
Q ss_pred CcccccccccccccCCCcEeccCCCccCHhHHHHHH----------------HhcCCCCCCccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----------------KIESKCPMCKRR 52 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----------------k~k~sCPlCRke 52 (673)
.++.|.||-. +....+.-+-.|+..||..|+++.- ..-|+||.|..-
T Consensus 14 ~D~~C~VC~~-~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL 76 (89)
T 1wil_A 14 NDEMCDVCEV-WTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CSCCCTTTCC-CCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CCcccCcccc-ccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchh
Confidence 4678999974 3233344455599999999999861 113789999543
No 171
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.19 E-value=0.45 Score=40.29 Aligned_cols=45 Identities=22% Similarity=0.450 Sum_probs=33.3
Q ss_pred ccccccccccccCCCcEeccCCCccCHhHHHHHH----Hh-cCCCCCCcc
Q 005857 7 RSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA----KI-ESKCPMCKR 51 (673)
Q Consensus 7 ~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs----k~-k~sCPlCRk 51 (673)
..|.||...-....+...+.|...||..|+.+-+ +. .+.||.|..
T Consensus 27 c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 3688998654345667788899999999998533 33 688999964
No 172
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=72.43 E-value=0.71 Score=44.36 Aligned_cols=48 Identities=27% Similarity=0.590 Sum_probs=37.9
Q ss_pred ccccccccCCCCcccccccc--ccccccccccccCC-------CCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCD--LCDTASHTYCVGMG-------NAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD--~Cd~afH~~CL~pp-------~~VP~gdW~Cp~Cr~~~ 146 (673)
..+|.+|..++ .+++|+ .|.+.|+..|+... .-+...+|.|-.|....
T Consensus 79 ~~yC~wC~~Gg---~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 79 QSYCTICCGGR---EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp BSSCTTTSCCS---EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred cceeeEecCCC---eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 36899999874 688999 89999999999732 11446789999998754
No 173
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=71.70 E-value=0.49 Score=39.77 Aligned_cols=47 Identities=15% Similarity=0.299 Sum_probs=33.5
Q ss_pred CcccccccccccccCCCcEec--cCCCccCHhHHHHHH---------HhcCCCCCCccc
Q 005857 5 HSRSCGICLMDEGKSIRGQID--SCDHYFCFVCIMEWA---------KIESKCPMCKRR 52 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld--~CgH~FC~~CI~eWs---------k~k~sCPlCRke 52 (673)
+...| ||............+ .|..+||..|+.--. ...+.||.|+..
T Consensus 15 ~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 15 IKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp CCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred CCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 45678 899875445556677 899999999985321 135789999754
No 174
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=71.06 E-value=0.31 Score=42.09 Aligned_cols=49 Identities=14% Similarity=0.346 Sum_probs=36.4
Q ss_pred cccccccccccc--cCCCcEeccCCCccCHhHHHHHH--------HhcCCCCCCccccc
Q 005857 6 SRSCGICLMDEG--KSIRGQIDSCDHYFCFVCIMEWA--------KIESKCPMCKRRFT 54 (673)
Q Consensus 6 d~~CpICLE~f~--~~~~~~Ld~CgH~FC~~CI~eWs--------k~k~sCPlCRkeFt 54 (673)
+..|.||...-. ...+...+.|...||..|+.+-+ +..|.|+.|.....
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 458999998542 23567788899999999987643 23689999976543
No 175
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=69.24 E-value=0.48 Score=39.09 Aligned_cols=47 Identities=13% Similarity=0.311 Sum_probs=33.6
Q ss_pred CCcccccccccccccCCCcEeccCCCccCHhHHHHHH---HhcCCCCCCcc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWA---KIESKCPMCKR 51 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWs---k~k~sCPlCRk 51 (673)
.+...| ||............+.|..+||..|+..-. ...+.||.|+.
T Consensus 17 ~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 17 QGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 455779 999876544456678899999999985432 23577888864
No 176
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=68.58 E-value=0.82 Score=43.22 Aligned_cols=48 Identities=23% Similarity=0.438 Sum_probs=34.3
Q ss_pred CCcccccccccccc-cCCCcEeccCCCccCHhHHHHHH-----HhcCCCCCCccc
Q 005857 4 LHSRSCGICLMDEG-KSIRGQIDSCDHYFCFVCIMEWA-----KIESKCPMCKRR 52 (673)
Q Consensus 4 ~Ed~~CpICLE~f~-~~~~~~Ld~CgH~FC~~CI~eWs-----k~k~sCPlCRke 52 (673)
.+...| ||..... ......++.|..+||..|+.--. ...+.||.|+..
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 456789 9998764 23456678899999999985322 236889999754
No 177
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.20 E-value=2.6 Score=33.61 Aligned_cols=46 Identities=20% Similarity=0.273 Sum_probs=31.0
Q ss_pred cccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
+...|.+|.+.-.....+ .|+..||..|+... -.....||.|+..-
T Consensus 14 ~~~~C~IC~~~~~~~~~~---~CgH~fC~~Ci~~~---~~~~~~CP~Cr~~~ 59 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVSL---PCKHVFCYLCVKGA---SWLGKRCALCRQEI 59 (71)
T ss_dssp SCCBCSSSSSBCSSEEEE---TTTEEEEHHHHHHC---TTCSSBCSSSCCBC
T ss_pred CCCCCccCCcccCCCEEc---cCCCHHHHHHHHHH---HHCCCcCcCcCchh
Confidence 346799998765443333 58888999998732 12236899999753
No 178
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.00 E-value=1.5 Score=35.09 Aligned_cols=48 Identities=23% Similarity=0.184 Sum_probs=30.6
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|...-.....+.-..|+..||..|+..-. .....||.|+..-
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~---~~~~~CP~Cr~~~ 62 (74)
T 2ep4_A 15 HELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWL---EVRKVCPLCNMPV 62 (74)
T ss_dssp SCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHH---HHCSBCTTTCCBC
T ss_pred CCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHH---HcCCcCCCcCccc
Confidence 35799998764433333223689999999997320 1123799998753
No 179
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=65.06 E-value=1.2 Score=37.79 Aligned_cols=47 Identities=17% Similarity=0.299 Sum_probs=30.4
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
...|.+|...-..+..+..-.|+..||..|+..- -...-.||.|+..
T Consensus 40 ~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~w---l~~~~~CP~Cr~~ 86 (91)
T 2l0b_A 40 EMCCPICCSEYVKGDVATELPCHHYFHKPCVSIW---LQKSGTCPVCRCM 86 (91)
T ss_dssp CSEETTTTEECCTTCEEEEETTTEEEEHHHHHHH---HTTTCBCTTTCCB
T ss_pred CCCCcccChhhcCCCcEEecCCCChHHHHHHHHH---HHcCCcCcCcCcc
Confidence 3579999765333223333459999999999742 1123479999864
No 180
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.58 E-value=4.1 Score=30.73 Aligned_cols=45 Identities=22% Similarity=0.412 Sum_probs=28.6
Q ss_pred cccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCC
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~C 142 (673)
+...|.+|.+.-....++ .|+..||..|+............||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVII---ECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCCC---SSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCccEeC---CCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 346799998775544333 688889999987321101245678876
No 181
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=64.53 E-value=2.8 Score=45.42 Aligned_cols=48 Identities=23% Similarity=0.514 Sum_probs=37.5
Q ss_pred ccccccccCCCCcccccccc--ccccccccccccCC------CC-CCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCD--LCDTASHTYCVGMG------NA-VPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD--~Cd~afH~~CL~pp------~~-VP~gdW~Cp~Cr~~~ 146 (673)
..+|.+|+.++ .+++|+ .|.+.||..|+... .. ....+|.|-.|....
T Consensus 93 ~~yCr~C~~Gg---~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 93 QSYCSICCSGE---TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp BCSCTTTCCCS---SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred cccceEcCCCC---eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 36899999874 689999 99999999999842 11 224679999998764
No 182
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=64.26 E-value=0.57 Score=40.98 Aligned_cols=46 Identities=20% Similarity=0.283 Sum_probs=31.7
Q ss_pred CCcccccccccccccCCCcEeccCC---CccCHhHHHHH--HHhcCCCCC-Ccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDSCD---HYFCFVCIMEW--AKIESKCPM-CKR 51 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~Cg---H~FC~~CI~eW--sk~k~sCPl-CRk 51 (673)
.+...| ||..... ......+.|. .+||+.|+.-- ....+.||. |++
T Consensus 24 ~~~~yC-iC~~~~~-g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 24 QEEVYC-FCRNVSY-GPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp CCSCCS-TTTCCCS-SSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHH
T ss_pred CCCcEE-EeCCCCC-CCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcc
Confidence 345678 9997542 3455677766 89999998521 134689999 974
No 183
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=64.14 E-value=2.1 Score=37.18 Aligned_cols=34 Identities=24% Similarity=0.478 Sum_probs=22.6
Q ss_pred ccccccccccccccCC--CCCCCCCccCcCCCCccc
Q 005857 114 CDLCDTASHTYCVGMG--NAVPEGDWFCHDCTVLRD 147 (673)
Q Consensus 114 CD~Cd~afH~~CL~pp--~~VP~gdW~Cp~Cr~~~~ 147 (673)
...|+..||..|+..- .......-.||.|+....
T Consensus 58 ~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 58 LTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp ESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred cCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 3579999999999732 011123457999997644
No 184
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.95 E-value=4.7 Score=33.89 Aligned_cols=50 Identities=18% Similarity=0.231 Sum_probs=29.0
Q ss_pred ccccccccCCCCc-ccc-ccc--cccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYE-SLL-LLC--DLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~e-e~L-L~C--D~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.||.....+ +.+ +-| .+....||..||..=... .+...||.|+...
T Consensus 15 ~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~-~~~~~CplCr~~~ 68 (80)
T 2d8s_A 15 QDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKS-SDTRCCELCKYEF 68 (80)
T ss_dssp SCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHH-HCCSBCSSSCCBC
T ss_pred CCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhh-CCCCCCCCCCCee
Confidence 3579999865432 222 222 222489999999731000 1235899999764
No 185
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.63 E-value=3.4 Score=32.38 Aligned_cols=47 Identities=13% Similarity=0.247 Sum_probs=31.8
Q ss_pred cccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
+...|.+|.+.-....+ -.|+..||..|+... +......||.|+...
T Consensus 14 ~~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~--~~~~~~~CP~Cr~~~ 60 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQ---TECGHRFCESCMAAL--LSSSSPKCTACQESI 60 (66)
T ss_dssp CCEECTTTCCEESSCCC---CSSSCCCCHHHHHHH--HTTSSCCCTTTCCCC
T ss_pred cCCCCCCCChHhcCeeE---CCCCCHHHHHHHHHH--HHhCcCCCCCCCcCC
Confidence 34679999876544333 378888999998742 113456799998764
No 186
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=62.54 E-value=11 Score=28.91 Aligned_cols=42 Identities=24% Similarity=0.487 Sum_probs=28.7
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|.+.-....++ .|+..||..|+.. ....||.|+...
T Consensus 6 ~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~------~~~~CP~Cr~~~ 47 (56)
T 1bor_A 6 FLRCQQCQAEAKCPKLL---PCLHTLCSGCLEA------SGMQCPICQAPW 47 (56)
T ss_dssp CSSCSSSCSSCBCCSCS---TTSCCSBTTTCSS------SSSSCSSCCSSS
T ss_pred CCCceEeCCccCCeEEc---CCCCcccHHHHcc------CCCCCCcCCcEe
Confidence 46799998765444333 4777788888753 245799998753
No 187
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=62.39 E-value=0.5 Score=38.70 Aligned_cols=47 Identities=17% Similarity=0.347 Sum_probs=30.6
Q ss_pred CCcccccccccccccCCCcEecc--CCCccCHhHHHHH---HH-----hcCCCCCCcc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDS--CDHYFCFVCIMEW---AK-----IESKCPMCKR 51 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~--CgH~FC~~CI~eW---sk-----~k~sCPlCRk 51 (673)
.+...| ||............+. |..+||..|+.-- .+ ..+.||.||.
T Consensus 8 e~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 8 EAKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp SCEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CCCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 345678 8977554444455663 9999999997321 11 1478999974
No 188
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=61.81 E-value=6.3 Score=31.58 Aligned_cols=48 Identities=25% Similarity=0.440 Sum_probs=31.7
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCC----CCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAV----PEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~V----P~gdW~Cp~Cr~~~ 146 (673)
...|.+|.+.-....++ .|+..||..|+...... ..+...||.|+...
T Consensus 12 ~~~C~IC~~~~~~p~~l---~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 12 EVTCPICLELLTEPLSL---DCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CCEETTTTEECSSCCCC---SSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred CCCCcCCCcccCCeeEC---CCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 46799998765443333 68888999999743111 12357899999764
No 189
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=61.73 E-value=0.58 Score=37.58 Aligned_cols=46 Identities=24% Similarity=0.470 Sum_probs=31.2
Q ss_pred CCcccccccccccccCCCcEecc--CC-CccCHhHHHHHH--HhcCCCCCCcc
Q 005857 4 LHSRSCGICLMDEGKSIRGQIDS--CD-HYFCFVCIMEWA--KIESKCPMCKR 51 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld~--Cg-H~FC~~CI~eWs--k~k~sCPlCRk 51 (673)
.+...| ||.... .......+. |. .+||+.|+.--. ..++.||.|++
T Consensus 7 ~e~~yC-~C~~~~-~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 7 NEPTYC-LCHQVS-YGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp -CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC
T ss_pred CCCcEE-ECCCCC-CCCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccC
Confidence 355678 999865 344556677 66 699999986221 23678999864
No 190
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.44 E-value=2.8 Score=35.20 Aligned_cols=45 Identities=22% Similarity=0.510 Sum_probs=31.4
Q ss_pred cccccccCCCCccccccccccccccccccccCC-CCCCCCCccCcCCCCc
Q 005857 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG-NAVPEGDWFCHDCTVL 145 (673)
Q Consensus 97 ~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp-~~VP~gdW~Cp~Cr~~ 145 (673)
..|.+|...-.. -+.|..|+..||..|+.-- .. ...-.||.|+..
T Consensus 16 ~~C~IC~~~i~~--g~~C~~C~h~fH~~Ci~kWl~~--~~~~~CP~Cr~~ 61 (74)
T 2ct0_A 16 KICNICHSLLIQ--GQSCETCGIRMHLPCVAKYFQS--NAEPRCPHCNDY 61 (74)
T ss_dssp CBCSSSCCBCSS--SEECSSSCCEECHHHHHHHSTT--CSSCCCTTTCSC
T ss_pred CcCcchhhHccc--CCccCCCCchhhHHHHHHHHHh--cCCCCCCCCcCc
Confidence 579999876543 2468899999999999731 11 122569999854
No 191
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=60.35 E-value=7.3 Score=33.80 Aligned_cols=35 Identities=26% Similarity=0.722 Sum_probs=28.2
Q ss_pred ccccccccccc-ccccccccCCCCCCCCCccCcCCCCc
Q 005857 109 SLLLLCDLCDT-ASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 109 e~LL~CD~Cd~-afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
..+++|..|+. ..|..|.... ....+|.|..|...
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~l~--~~~~~weC~~C~~v 79 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSSLR--PNSKKWECNECLPA 79 (85)
T ss_dssp TBCEECSSSCCCEECSGGGTCC--TTCSCCCCTTTSCC
T ss_pred EEEEeCcccCCchhHHHHhCCc--CCCCCEECCcCccc
Confidence 46999999987 9999999864 23467999999853
No 192
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=57.69 E-value=6.4 Score=42.62 Aligned_cols=46 Identities=22% Similarity=0.493 Sum_probs=35.6
Q ss_pred CCcccccccccccccCCCcEec--cCCCccCHhHHHHHH------H----hcCCCCCCccc
Q 005857 4 LHSRSCGICLMDEGKSIRGQID--SCDHYFCFVCIMEWA------K----IESKCPMCKRR 52 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld--~CgH~FC~~CI~eWs------k----~k~sCPlCRke 52 (673)
..+..|.||-+. .....++ .|...||..||.... + ..|.|=+|...
T Consensus 91 G~~~yCr~C~~G---g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 91 GYQSYCSICCSG---ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp SSBCSCTTTCCC---SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred CCcccceEcCCC---CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 346789999984 3567778 899999999999875 1 25899999744
No 193
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=57.64 E-value=5.8 Score=30.64 Aligned_cols=43 Identities=23% Similarity=0.361 Sum_probs=29.9
Q ss_pred ccccccccccc-CCCcEec-cCCCccCHhHHHHH----HHhcCCCCCCc
Q 005857 8 SCGICLMDEGK-SIRGQID-SCDHYFCFVCIMEW----AKIESKCPMCK 50 (673)
Q Consensus 8 ~CpICLE~f~~-~~~~~Ld-~CgH~FC~~CI~eW----sk~k~sCPlCR 50 (673)
.|.||...+.+ ......+ .|..+||..|+.-- ....+.||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 57899888743 2345567 79999999997422 13468899985
No 194
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=57.37 E-value=0.74 Score=36.97 Aligned_cols=45 Identities=22% Similarity=0.518 Sum_probs=30.4
Q ss_pred CcccccccccccccCCCcEecc--CC-CccCHhHHHHHH--HhcCCCCCCcc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDS--CD-HYFCFVCIMEWA--KIESKCPMCKR 51 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~--Cg-H~FC~~CI~eWs--k~k~sCPlCRk 51 (673)
+...| ||.... .......+. |. .+||+.|+.--. ...+.||.|+.
T Consensus 9 e~~~C-~C~~~~-~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 9 EPTYC-LCHQVS-YGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC
T ss_pred CCCEE-ECCCcC-CCCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCccC
Confidence 45678 999864 334455677 55 799999986211 24688998864
No 195
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=57.10 E-value=5.3 Score=38.34 Aligned_cols=45 Identities=22% Similarity=0.385 Sum_probs=33.4
Q ss_pred CCcccccccccccccCCCcEec--cCCCccCHhHHHHHHH----------hcCCCCCCcc
Q 005857 4 LHSRSCGICLMDEGKSIRGQID--SCDHYFCFVCIMEWAK----------IESKCPMCKR 51 (673)
Q Consensus 4 ~Ed~~CpICLE~f~~~~~~~Ld--~CgH~FC~~CI~eWsk----------~k~sCPlCRk 51 (673)
..+..|.||-+.. .+...+ .|...||..||..+.. ..|.|=+|.-
T Consensus 77 G~~~yC~wC~~Gg---~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 77 GYQSYCTICCGGR---EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp SSBSSCTTTSCCS---EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred CCcceeeEecCCC---eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 3467899999843 445666 6899999999988652 1478999964
No 196
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=56.55 E-value=0.81 Score=37.12 Aligned_cols=45 Identities=24% Similarity=0.503 Sum_probs=30.7
Q ss_pred CcccccccccccccCCCcEecc--CC-CccCHhHHHHHH--HhcCCCCCCcc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDS--CD-HYFCFVCIMEWA--KIESKCPMCKR 51 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~--Cg-H~FC~~CI~eWs--k~k~sCPlCRk 51 (673)
+...| ||.... .......+. |. .+||+.|+.--. ...+.||.|+.
T Consensus 10 e~~yC-~C~~~~-~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 10 EPTYC-LCNQVS-YGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRG 59 (62)
T ss_dssp CCEET-TTTEEC-CSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHT
T ss_pred CCcEE-ECCCCC-CCCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCccc
Confidence 45678 999864 334556677 44 899999986321 23688999864
No 197
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=56.50 E-value=5.7 Score=34.58 Aligned_cols=46 Identities=20% Similarity=0.414 Sum_probs=32.2
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|...-.....+ .|+..||..|+... +..+...||.|+...
T Consensus 15 ~~~C~iC~~~~~~p~~~---~CgH~fC~~Ci~~~--~~~~~~~CP~Cr~~~ 60 (115)
T 3l11_A 15 ECQCGICMEILVEPVTL---PCNHTLCKPCFQST--VEKASLCCPFCRRRV 60 (115)
T ss_dssp HHBCTTTCSBCSSCEEC---TTSCEECHHHHCCC--CCTTTSBCTTTCCBC
T ss_pred CCCCccCCcccCceeEc---CCCCHHhHHHHHHH--HhHCcCCCCCCCccc
Confidence 46799998765443333 68888999998743 223457899999764
No 198
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=55.81 E-value=0.9 Score=37.47 Aligned_cols=47 Identities=17% Similarity=0.244 Sum_probs=32.8
Q ss_pred CcccccccccccccC-CCcEeccCCCccCHhHHHHHH----HhcCCCCCCccc
Q 005857 5 HSRSCGICLMDEGKS-IRGQIDSCDHYFCFVCIMEWA----KIESKCPMCKRR 52 (673)
Q Consensus 5 Ed~~CpICLE~f~~~-~~~~Ld~CgH~FC~~CI~eWs----k~k~sCPlCRke 52 (673)
+...| ||.....+. .....+.|..+||..|+.--. ...+.||.|+..
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~ 66 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCC
Confidence 44679 799875433 456678899999999985432 235789988654
No 199
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=55.56 E-value=7.3 Score=32.48 Aligned_cols=50 Identities=18% Similarity=0.380 Sum_probs=31.9
Q ss_pred ccccccccCCCCcc--ccccccccccccccccccCCCCCCCCCccCcCCCCcccc
Q 005857 96 YVRCNVCQGTTYES--LLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLRDE 148 (673)
Q Consensus 96 ~~~CsVC~~~d~ee--~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~~e 148 (673)
...|.+|.+.-... .++-| .|+..||..|+.-. +..+...||.|+.....
T Consensus 11 ~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~--~~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 11 PVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRI--RTDENGLCPACRKPYPE 62 (78)
T ss_dssp CCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHH--TTSSCSBCTTTCCBCSS
T ss_pred CCcCCccCccCcccccccccc-CCCCCcCHHHHHHH--HhcCCCCCCCCCCccCC
Confidence 36799998743211 12223 58888999998632 11246789999986543
No 200
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.88 E-value=4.9 Score=32.34 Aligned_cols=49 Identities=20% Similarity=0.445 Sum_probs=32.1
Q ss_pred ccccccccCCCCccccccccccccccccccccCC--C-CCCCCCccCcCCCCccc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG--N-AVPEGDWFCHDCTVLRD 147 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp--~-~VP~gdW~Cp~Cr~~~~ 147 (673)
...|.+|.+.-....++ .|+..||..|+... . ....+...||.|+....
T Consensus 19 ~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 19 EVTCPICLELLTQPLSL---DCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCTTTCSCCSSCBCC---SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred CCCCCCCCcccCCceeC---CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 46799998875443333 68888999998732 0 01223578999997643
No 201
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.79 E-value=3.7 Score=33.99 Aligned_cols=29 Identities=17% Similarity=0.368 Sum_probs=20.3
Q ss_pred cccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 115 DLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 115 D~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
..|+..||..|+..- -...-.||.|+..-
T Consensus 46 ~~C~H~FH~~Ci~~W---l~~~~~CP~CR~~~ 74 (81)
T 2ecl_A 46 GECNHSFHNCCMSLW---VKQNNRCPLCQQDW 74 (81)
T ss_dssp ETTSCEEEHHHHHHH---TTTCCBCTTTCCBC
T ss_pred CCCCCccChHHHHHH---HHhCCCCCCcCCCc
Confidence 369999999999732 01123799999753
No 202
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=53.37 E-value=2.2 Score=31.93 Aligned_cols=46 Identities=15% Similarity=0.294 Sum_probs=29.9
Q ss_pred cccccccCCCC-ccccccccccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 97 VRCNVCQGTTY-ESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 97 ~~CsVC~~~d~-ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
..|.+|.+.-. ....+....|+..||..|+..-. .....||.|+..
T Consensus 6 ~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~---~~~~~CP~Cr~~ 52 (55)
T 2ecm_A 6 SGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEML---KEGYRCPLCSGP 52 (55)
T ss_dssp CSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHH---HHTCCCTTSCCS
T ss_pred CcCcccChhhcCCCcCeEecCCCCcccHHHHHHHH---HcCCcCCCCCCc
Confidence 56999987632 22234456789999999997320 111569999864
No 203
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.86 E-value=7.8 Score=30.88 Aligned_cols=47 Identities=17% Similarity=0.407 Sum_probs=30.2
Q ss_pred cccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
+...|.+|.+.-.... .-..|+..||..|+.... .....||.|+..-
T Consensus 14 ~~~~C~IC~~~~~~p~--~~~~CgH~fC~~Ci~~~~---~~~~~CP~Cr~~~ 60 (72)
T 2djb_A 14 PYILCSICKGYLIDAT--TITECLHTFCKSCIVRHF---YYSNRCPKCNIVV 60 (72)
T ss_dssp GGGSCTTTSSCCSSCE--ECSSSCCEECHHHHHHHH---HHCSSCTTTCCCC
T ss_pred CCCCCCCCChHHHCcC--EECCCCCHHHHHHHHHHH---HcCCcCCCcCccc
Confidence 3467999987654322 224788889999986320 1124699999754
No 204
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.51 E-value=2.6 Score=34.46 Aligned_cols=46 Identities=15% Similarity=0.240 Sum_probs=30.7
Q ss_pred cccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
....|.+|...-....+ ..|+..||..|+.... .....||.|+...
T Consensus 14 ~~~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~---~~~~~CP~Cr~~~ 59 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVV---TKCRHYFCESCALEHF---RATPRCYICDQPT 59 (81)
T ss_dssp CCSBCSSSCSBCCSEEE---CTTSCEEEHHHHHHHH---HHCSBCSSSCCBC
T ss_pred CCCCCcCCCchhcCeeE---ccCCCHhHHHHHHHHH---HCCCcCCCcCccc
Confidence 34679999876544333 3688889999986320 1235699999764
No 205
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=52.03 E-value=3.7 Score=35.24 Aligned_cols=47 Identities=19% Similarity=0.334 Sum_probs=31.0
Q ss_pred cccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 97 ~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
..|.+|...-..... -.|+..||..|+........+...||.|+...
T Consensus 22 ~~C~IC~~~~~~p~~---~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 68 (112)
T 1jm7_A 22 LECPICLELIKEPVS---TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDI 68 (112)
T ss_dssp TSCSSSCCCCSSCCB---CTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCC
T ss_pred CCCcccChhhcCeEE---CCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcC
Confidence 579999876544333 26888899999874311112446899998754
No 206
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.52 E-value=3 Score=32.37 Aligned_cols=45 Identities=18% Similarity=0.363 Sum_probs=28.0
Q ss_pred cccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCC
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDC 142 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~C 142 (673)
+...|.+|.+.-.....+ .|+..||..|+............||.|
T Consensus 19 ~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQKPVTI---DCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSSCEEC---TTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred cCCCCCcCCchhCCeEEe---CCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 346799998765543333 788889999986321001134568876
No 207
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=51.29 E-value=1.8 Score=34.63 Aligned_cols=48 Identities=17% Similarity=0.302 Sum_probs=31.1
Q ss_pred ccccccccCCCCccccccc--cccccccccccccCCCCCC-CCCccCcCCCCc
Q 005857 96 YVRCNVCQGTTYESLLLLC--DLCDTASHTYCVGMGNAVP-EGDWFCHDCTVL 145 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~C--D~Cd~afH~~CL~pp~~VP-~gdW~Cp~Cr~~ 145 (673)
...|.+|.....+..+.-| .+.-.++|..||..= +- .+.+.|+.|+..
T Consensus 6 ~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W--~~~~~~~~C~~C~~~ 56 (60)
T 1vyx_A 6 VPVCWICNEELGNERFRACGCTGELENVHRSCLSTW--LTISRNTACQICGVV 56 (60)
T ss_dssp CCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHH--HHHHTCSBCTTTCCB
T ss_pred CCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHH--HHhCCCCccCCCCCe
Confidence 3579999766544445554 233449999999731 10 246889999865
No 208
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=49.83 E-value=9.3 Score=30.68 Aligned_cols=48 Identities=23% Similarity=0.443 Sum_probs=31.7
Q ss_pred ccccccccCCCCccccccccccccccccccccCC---CCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMG---NAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp---~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|...-....++ .|+..||..|+... .....+...||.|+...
T Consensus 19 ~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecw_A 19 EVTCPICLELLKEPVSA---DCNHSFCRACITLNYESNRNTDGKGNCPVCRVPY 69 (85)
T ss_dssp TTSCTTTCSCCSSCEEC---TTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCC
T ss_pred CCCCcCCChhhCcceeC---CCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcC
Confidence 46799998765443332 58888999998742 11122468899999764
No 209
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.29 E-value=5.8 Score=32.37 Aligned_cols=51 Identities=16% Similarity=0.226 Sum_probs=31.4
Q ss_pred ccccccccCCCCccc-cccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESL-LLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~-LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|...-.... ...--.|+..||..|+............||.|+...
T Consensus 15 ~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~ 66 (88)
T 2ct2_A 15 VLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKIT 66 (88)
T ss_dssp CCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCB
T ss_pred CCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcc
Confidence 467999987643311 022236898999999973211112347899999764
No 210
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.19 E-value=5.5 Score=31.40 Aligned_cols=44 Identities=16% Similarity=0.337 Sum_probs=30.6
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|.+.... . -..|+..||..|+..- -.....||.|+..-
T Consensus 15 ~~~C~IC~~~~~~-~---~~~CgH~fc~~Ci~~~---~~~~~~CP~Cr~~~ 58 (70)
T 2ecn_A 15 EEECCICMDGRAD-L---ILPCAHSFCQKCIDKW---SDRHRNCPICRLQM 58 (70)
T ss_dssp CCCCSSSCCSCCS-E---EETTTEEECHHHHHHS---SCCCSSCHHHHHCT
T ss_pred CCCCeeCCcCccC-c---ccCCCCcccHHHHHHH---HHCcCcCCCcCCcc
Confidence 4679999877544 2 2468888999999732 12457899998653
No 211
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=48.82 E-value=6.3 Score=31.98 Aligned_cols=43 Identities=23% Similarity=0.403 Sum_probs=31.8
Q ss_pred ccccccccccccCCCcEeccCCCccCHhHHHHHHHhcCCCCCC
Q 005857 7 RSCGICLMDEGKSIRGQIDSCDHYFCFVCIMEWAKIESKCPMC 49 (673)
Q Consensus 7 ~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~eWsk~k~sCPlC 49 (673)
..|--|+..|.+..+.....|.+.||.+|=.=-.+.-..||-|
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCC
Confidence 3599999988433234577899999999965545556679988
No 212
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=48.68 E-value=7.1 Score=42.03 Aligned_cols=32 Identities=31% Similarity=0.761 Sum_probs=23.7
Q ss_pred ccccccccCCCCc-c--cccccc--cccccccccccc
Q 005857 96 YVRCNVCQGTTYE-S--LLLLCD--LCDTASHTYCVG 127 (673)
Q Consensus 96 ~~~CsVC~~~d~e-e--~LL~CD--~Cd~afH~~CL~ 127 (673)
...|.+|.....+ + -...|+ .|+..||..||.
T Consensus 308 ~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~ 344 (381)
T 3k1l_B 308 ELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLE 344 (381)
T ss_dssp CCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGH
T ss_pred CccCcccceeecCCCCCccccccCCccCCccchHHHH
Confidence 4579999865332 1 235687 999999999996
No 213
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=48.45 E-value=5.1 Score=35.25 Aligned_cols=52 Identities=19% Similarity=0.435 Sum_probs=40.7
Q ss_pred cccccccccCC----CCccccccccccccccccccccCCCCCCCCCccCcCCCCcccc
Q 005857 95 AYVRCNVCQGT----TYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLRDE 148 (673)
Q Consensus 95 e~~~CsVC~~~----d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~~e 148 (673)
....|.+|++. .+.+..+-|..|....+..|+.-. .-+|.-.||+|......
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYE--rkeG~q~CpqCktrYkr 70 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYE--RREGTQNCPQCKTRYKR 70 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHH--HHTSCSSCTTTCCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHH--HhccCccccccCCcccc
Confidence 34689999876 244578899999999999999843 34688999999887653
No 214
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=46.26 E-value=4.6 Score=36.57 Aligned_cols=43 Identities=21% Similarity=0.454 Sum_probs=29.1
Q ss_pred cccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 97 ~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
..|.+|...-....++ .|+..||..|+..- -...-.||.|+..
T Consensus 54 ~~C~iC~~~~~~~~~~---~CgH~fc~~Ci~~~---~~~~~~CP~Cr~~ 96 (138)
T 4ayc_A 54 LQCIICSEYFIEAVTL---NCAHSFCSYCINEW---MKRKIECPICRKD 96 (138)
T ss_dssp SBCTTTCSBCSSEEEE---TTSCEEEHHHHHHH---TTTCSBCTTTCCB
T ss_pred CCCcccCcccCCceEC---CCCCCccHHHHHHH---HHcCCcCCCCCCc
Confidence 4699998765443333 58888999998631 1223569999875
No 215
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=45.97 E-value=2.7 Score=34.92 Aligned_cols=47 Identities=19% Similarity=0.465 Sum_probs=32.6
Q ss_pred Ccccccccccccc-cCCCcEeccCCCccCHhHHHHHHH-----hcCCCCCCccc
Q 005857 5 HSRSCGICLMDEG-KSIRGQIDSCDHYFCFVCIMEWAK-----IESKCPMCKRR 52 (673)
Q Consensus 5 Ed~~CpICLE~f~-~~~~~~Ld~CgH~FC~~CI~eWsk-----~k~sCPlCRke 52 (673)
+...| ||...+. +......+.|.-+||..|+.--.. ..+.||.|+..
T Consensus 9 ~~~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 9 VPVYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred CeeEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 34556 8988664 234566788999999999954321 25789999754
No 216
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=45.29 E-value=3.6 Score=34.25 Aligned_cols=48 Identities=13% Similarity=0.414 Sum_probs=30.2
Q ss_pred cccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
+...|.+|.+.-....++ ..|+..||..|+..... ..+...||.|+..
T Consensus 12 ~~~~C~IC~~~~~~p~~~--~~CgH~fC~~Ci~~~~~-~~~~~~CP~Cr~~ 59 (92)
T 3ztg_A 12 DELLCLICKDIMTDAVVI--PCCGNSYCDECIRTALL-ESDEHTCPTCHQN 59 (92)
T ss_dssp TTTEETTTTEECSSCEEC--TTTCCEECHHHHHHHHH-HCTTCCCTTTCCS
T ss_pred cCCCCCCCChhhcCceEC--CCCCCHHHHHHHHHHHH-hcCCCcCcCCCCc
Confidence 346799998754433333 23888888888863200 0123589999975
No 217
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=39.10 E-value=8.2 Score=31.02 Aligned_cols=47 Identities=11% Similarity=0.206 Sum_probs=31.7
Q ss_pred cccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
+...|.+|.+.-.....+ .|+..||..|+... +..+...||.|+..-
T Consensus 7 ~~~~C~IC~~~~~~Pv~~---~CgH~fc~~Ci~~~--~~~~~~~CP~C~~~~ 53 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIV---STGQTYERSSIQKW--LDAGHKTCPKSQETL 53 (78)
T ss_dssp SSSSCTTTSCCCSSEEEE---TTTEEEEHHHHHHH--HTTTCCBCTTTCCBC
T ss_pred ccCCCCCccccccCCEEc---CCCCeecHHHHHHH--HHHCcCCCCCCcCCC
Confidence 346799998765443333 68888898898632 113467899998753
No 218
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=38.54 E-value=9 Score=30.81 Aligned_cols=48 Identities=13% Similarity=0.377 Sum_probs=30.5
Q ss_pred cccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
+...|.+|.+.-..... -..|+..||..|+...... .+...||.|+..
T Consensus 14 ~~~~C~IC~~~~~~p~~--~~~CgH~fC~~Ci~~~~~~-~~~~~CP~Cr~~ 61 (74)
T 2yur_A 14 DELLCLICKDIMTDAVV--IPCCGNSYCDECIRTALLE-SDEHTCPTCHQN 61 (74)
T ss_dssp GGGSCSSSCCCCTTCEE--CSSSCCEECTTHHHHHHHH-SSSSCCSSSCCS
T ss_pred CCCCCcCCChHHhCCeE--cCCCCCHHHHHHHHHHHHh-cCCCcCCCCCCc
Confidence 44679999876543333 2338888999998632000 123579999974
No 219
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=38.43 E-value=3.4 Score=32.47 Aligned_cols=48 Identities=19% Similarity=0.376 Sum_probs=31.0
Q ss_pred ccccccccCCCCc----cccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYE----SLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~e----e~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|.+.-.. +..+....|+..||..|+..- -...-.||.|+..-
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~---~~~~~~CP~Cr~~~ 61 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDS---LKNANTCPTCRKKI 61 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHH---HHHCSBCTTTCCBC
T ss_pred CCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHH---HHcCCCCCCCCCcc
Confidence 4679999875322 123345689999999999632 01113799998754
No 220
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=38.06 E-value=18 Score=43.31 Aligned_cols=48 Identities=8% Similarity=-0.135 Sum_probs=41.1
Q ss_pred CcccccccccccccCCCcEeccCC-CccCHhHHHHHHHhcCCCCCCcccccc
Q 005857 5 HSRSCGICLMDEGKSIRGQIDSCD-HYFCFVCIMEWAKIESKCPMCKRRFTS 55 (673)
Q Consensus 5 Ed~~CpICLE~f~~~~~~~Ld~Cg-H~FC~~CI~eWsk~k~sCPlCRkeFt~ 55 (673)
++..|||=++.+.+ +++++-| ++|-..+|.+|.....+||.-|+++..
T Consensus 890 ~~F~cPIs~~lM~D---PVilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~ 938 (968)
T 3m62_A 890 DEFLDPLMYTIMKD---PVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKL 938 (968)
T ss_dssp GGGBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred HHhCCcchhhHHhC---CeEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCc
Confidence 35679999999966 7888887 699999999999888899999988764
No 221
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=37.21 E-value=5.2 Score=44.37 Aligned_cols=47 Identities=19% Similarity=0.365 Sum_probs=33.9
Q ss_pred Ccccccccccccc-cCCCcEeccCCCccCHhHHHHHHH-----hcCCCCCCccc
Q 005857 5 HSRSCGICLMDEG-KSIRGQIDSCDHYFCFVCIMEWAK-----IESKCPMCKRR 52 (673)
Q Consensus 5 Ed~~CpICLE~f~-~~~~~~Ld~CgH~FC~~CI~eWsk-----~k~sCPlCRke 52 (673)
+...| ||...+. ......++.|..+||..|+.--.. ..+.||.|+..
T Consensus 36 ~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 36 PPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp CCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 44568 8998764 344567888999999999853221 25899999864
No 222
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=36.65 E-value=8.3 Score=34.08 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=20.3
Q ss_pred cccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 115 DLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 115 D~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
..|+..||..|+..- -...-.||.|+..
T Consensus 71 ~~C~H~FH~~Ci~~W---l~~~~~CP~Cr~~ 98 (106)
T 3dpl_R 71 GVCNHAFHFHCISRW---LKTRQVCPLDNRE 98 (106)
T ss_dssp ETTSCEEEHHHHHHH---HTTCSBCSSSCSB
T ss_pred cccCcEECHHHHHHH---HHcCCcCcCCCCc
Confidence 479999999999742 1123469999975
No 223
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=36.34 E-value=8.4 Score=34.87 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=0.0
Q ss_pred cccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 115 DLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 115 D~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
..|+..||..|+..- -...-.||.|+..
T Consensus 82 ~~C~H~FH~~CI~~W---l~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 82 GVCNHAFHFHCISRW---LKTRQVCPLDNRE 109 (117)
T ss_dssp -------------------------------
T ss_pred CCcCceEcHHHHHHH---HHcCCcCCCCCCe
Confidence 479999999999732 1123459999875
No 224
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=35.67 E-value=6.1 Score=33.43 Aligned_cols=46 Identities=17% Similarity=0.395 Sum_probs=30.6
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|...-.....+ ..|+..||..|+.... ...-.||.|+...
T Consensus 22 ~~~C~IC~~~~~~p~~~--~~CgH~fC~~Ci~~~~---~~~~~CP~Cr~~~ 67 (99)
T 2y43_A 22 LLRCGICFEYFNIAMII--PQCSHNYCSLCIRKFL---SYKTQCPTCCVTV 67 (99)
T ss_dssp HTBCTTTCSBCSSEEEC--TTTCCEEEHHHHHHHH---TTCCBCTTTCCBC
T ss_pred CCCcccCChhhCCcCEE--CCCCCHhhHHHHHHHH---HCCCCCCCCCCcC
Confidence 36799998765443222 4688889999986321 1235799999754
No 225
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=35.43 E-value=6.7 Score=34.63 Aligned_cols=46 Identities=15% Similarity=0.418 Sum_probs=31.2
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|.+.-.....+ .|+..||..|+... +......||.|+..-
T Consensus 52 ~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~--~~~~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 52 TFQCICCQELVFRPITT---VCQHNVCKDCLDRS--FRAQVFSCPACRYDL 97 (124)
T ss_dssp HTBCTTTSSBCSSEEEC---TTSCEEEHHHHHHH--HHTTCCBCTTTCCBC
T ss_pred CCCCCcCChHHcCcEEe---eCCCcccHHHHHHH--HhHCcCCCCCCCccC
Confidence 36799998765443333 78888999998642 112335899999764
No 226
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=32.95 E-value=6.6 Score=31.09 Aligned_cols=46 Identities=11% Similarity=0.205 Sum_probs=29.0
Q ss_pred cccccccCCCCccccccccccccc-cccccccCCCCCCCCCccCcCCCCcc
Q 005857 97 VRCNVCQGTTYESLLLLCDLCDTA-SHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 97 ~~CsVC~~~d~ee~LL~CD~Cd~a-fH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
..|.+|.+......+++ ..|+.. ++..|..-. ....+.||.|+..-
T Consensus 8 ~~C~IC~~~~~~~~~~~-~pCgH~~~C~~C~~~~---~~~~~~CPiCR~~i 54 (63)
T 2vje_B 8 KPCSLCEKRPRDGNIIH-GRTGHLVTCFHCARRL---KKAGASCPICKKEI 54 (63)
T ss_dssp SBCTTTSSSBSCEEEEE-TTEEEEEECHHHHHHH---HHTTCBCTTTCCBC
T ss_pred CCCcccCCcCCCeEEEe-cCCCCHhHHHHHHHHH---HHhCCcCCCcCchh
Confidence 57999998654433332 466664 677777522 12246899999764
No 227
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=32.82 E-value=27 Score=37.61 Aligned_cols=48 Identities=21% Similarity=0.443 Sum_probs=32.5
Q ss_pred cccccccccccccCCCcEeccCCCccCHhHH--HHHH--HhcCCCCCCcccccc
Q 005857 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCI--MEWA--KIESKCPMCKRRFTS 55 (673)
Q Consensus 6 d~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI--~eWs--k~k~sCPlCRkeFt~ 55 (673)
.+.|||=+..+. ..+.-..|.|.-||+-. .... ...|.||+|.+.+..
T Consensus 249 SL~CPlS~~ri~--~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~ 300 (371)
T 3i2d_A 249 SLQCPISYTRMK--YPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIAL 300 (371)
T ss_dssp ESBCTTTSSBCS--SEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCG
T ss_pred eecCCCcccccc--ccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCH
Confidence 367998888773 33555669999888863 2222 236899999887543
No 228
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=32.59 E-value=30 Score=30.14 Aligned_cols=44 Identities=23% Similarity=0.393 Sum_probs=29.3
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|...-.....+ ..|+..||..|+.-... ..||.|+...
T Consensus 22 ~~~C~IC~~~~~~pv~~--~~CgH~fC~~Ci~~~~~-----~~CP~Cr~~~ 65 (117)
T 1jm7_B 22 LLRCSRCTNILREPVCL--GGCEHIFCSNCVSDCIG-----TGCPVCYTPA 65 (117)
T ss_dssp TTSCSSSCSCCSSCBCC--CSSSCCBCTTTGGGGTT-----TBCSSSCCBC
T ss_pred CCCCCCCChHhhCccEe--CCCCCHHHHHHHHHHhc-----CCCcCCCCcC
Confidence 46799998765443332 26888888888863211 4699998753
No 229
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=32.33 E-value=11 Score=33.26 Aligned_cols=37 Identities=16% Similarity=0.451 Sum_probs=26.8
Q ss_pred cccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 97 ~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
..|.+|+.. -|+.|+..||.+|++++ .|.|..|...+
T Consensus 8 ~~C~~C~~~-------~C~~C~~c~~~~~~~~~------~~~~~~c~~~~ 44 (117)
T 4bbq_A 8 RKCKACVQG-------ECGVCHYCRDMKKFGGP------GRMKQSCVLRQ 44 (117)
T ss_dssp SCSHHHHSC-------CCSCSHHHHHSGGGTSC------CCSCCCCGGGC
T ss_pred CcCcCcCCc-------CCCCCCCCcCCcccCCC------Cccccchhhee
Confidence 346666543 39999999999999865 38888776543
No 230
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=30.51 E-value=8.7 Score=35.60 Aligned_cols=48 Identities=15% Similarity=0.333 Sum_probs=32.4
Q ss_pred cccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
....|.+|.+.-... +.+..|+..||..|+... +-.+...||.|+..-
T Consensus 53 ~~~~C~IC~~~~~~p--~~~~~CgH~fC~~Ci~~~--~~~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 53 SELMCPICLDMLKNT--MTTKECLHRFCADCIITA--LRSGNKECPTCRKKL 100 (165)
T ss_dssp HHHBCTTTSSBCSSE--EEETTTCCEEEHHHHHHH--HHTTCCBCTTTCCBC
T ss_pred CCCCCcccChHhhCc--CEeCCCCChhHHHHHHHH--HHhCcCCCCCCCCcC
Confidence 346799998765432 334578999999999732 112356799999753
No 231
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=29.58 E-value=6.5 Score=33.68 Aligned_cols=47 Identities=21% Similarity=0.450 Sum_probs=32.2
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|.+.-.. -+.|..|+..||..|+..- +-.....||.|+...
T Consensus 22 ~~~C~IC~~~~~~--p~~~~~CgH~FC~~Ci~~~--~~~~~~~CP~Cr~~~ 68 (100)
T 3lrq_A 22 VFRCFICMEKLRD--ARLCPHCSKLCCFSCIRRW--LTEQRAQCPHCRAPL 68 (100)
T ss_dssp HTBCTTTCSBCSS--EEECTTTCCEEEHHHHHHH--HHHTCSBCTTTCCBC
T ss_pred CCCCccCCccccC--ccccCCCCChhhHHHHHHH--HHHCcCCCCCCCCcC
Confidence 4679999876543 3455789999999999732 001125799999764
No 232
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=29.28 E-value=29 Score=29.19 Aligned_cols=36 Identities=19% Similarity=0.309 Sum_probs=24.1
Q ss_pred CCCCcccccccccccccC-CCcEeccCCCccCHhHHH
Q 005857 2 EGLHSRSCGICLMDEGKS-IRGQIDSCDHYFCFVCIM 37 (673)
Q Consensus 2 e~~Ed~~CpICLE~f~~~-~~~~Ld~CgH~FC~~CI~ 37 (673)
+..+...|.+|...|.-- .+--.-.|++.||..|..
T Consensus 17 pd~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~ 53 (84)
T 1z2q_A 17 EDEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSR 53 (84)
T ss_dssp CTTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGC
T ss_pred cCCCCCCCcCcCCccccchhcccccCCCcEEChHHhC
Confidence 344567899999988421 122345589999988764
No 233
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=28.79 E-value=4.7 Score=33.90 Aligned_cols=35 Identities=17% Similarity=0.354 Sum_probs=22.9
Q ss_pred ccccc--cccccc---cCCCcEec-----cCCCccCHhHHHHHHH
Q 005857 7 RSCGI--CLMDEG---KSIRGQID-----SCDHYFCFVCIMEWAK 41 (673)
Q Consensus 7 ~~CpI--CLE~f~---~~~~~~Ld-----~CgH~FC~~CI~eWsk 41 (673)
.-||- |-..+. +....... .|++.||+.|...|..
T Consensus 26 ~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~~wH~ 70 (80)
T 2jmo_A 26 VLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYHE 70 (80)
T ss_dssp CCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTEECCS
T ss_pred EECCCCCCCcccEECCCCCcCCCCCCCCCCCCCeeccccCccccC
Confidence 34666 655442 12234444 6999999999999866
No 234
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=28.05 E-value=18 Score=36.24 Aligned_cols=47 Identities=21% Similarity=0.439 Sum_probs=32.6
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
...|.+|..---. -..|..|+..||..|+.--. ...+.-.||.|...
T Consensus 180 i~~C~iC~~iv~~--g~~C~~C~~~~H~~C~~~~~-~~~~~~~CP~C~~~ 226 (238)
T 3nw0_A 180 VKICNICHSLLIQ--GQSCETCGIRMHLPCVAKYF-QSNAEPRCPHCNDY 226 (238)
T ss_dssp CCBCTTTCSBCSS--CEECSSSCCEECHHHHHHHT-TTCSSCBCTTTCCB
T ss_pred CCcCcchhhHHhC--CcccCccChHHHHHHHHHHH-HhCCCCCCCCCCCC
Confidence 4679999876432 36788899999999997320 01234579999763
No 235
>2ffw_A Midline-1; B-BOX, ring finger, zinc-finger, ligase; NMR {Homo sapiens}
Probab=28.04 E-value=19 Score=30.07 Aligned_cols=34 Identities=18% Similarity=0.461 Sum_probs=27.3
Q ss_pred ccccccccCCCCccccccccccccccccccccC-C
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGM-G 129 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~p-p 129 (673)
.+.|++|...........|..|...|+..|+.+ .
T Consensus 30 ~v~C~~C~~~~~~~A~ksCl~C~~s~C~~hl~~~H 64 (78)
T 2ffw_A 30 KVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATH 64 (78)
T ss_dssp CCBCSSCCSSSCCBCCEEETTTTEEECHHHHHHHS
T ss_pred CccCCcCCCCCCCCCeeEccCccchhhhhhhHhhc
Confidence 367999986543457889999999999999986 5
No 236
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.00 E-value=44 Score=26.80 Aligned_cols=42 Identities=26% Similarity=0.373 Sum_probs=27.7
Q ss_pred ccccccccCCCCccccccccccccc-cccccccCCCCCCCCCccCcCCCCccc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTA-SHTYCVGMGNAVPEGDWFCHDCTVLRD 147 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~a-fH~~CL~pp~~VP~gdW~Cp~Cr~~~~ 147 (673)
...|.+|.+.....++ ..|+.. ++..|+.. .+.||.|+..-.
T Consensus 15 ~~~C~IC~~~~~~~v~---~pCgH~~~C~~C~~~-------~~~CP~CR~~i~ 57 (68)
T 2ea5_A 15 SKDCVVCQNGTVNWVL---LPCRHTCLCDGCVKY-------FQQCPMCRQFVQ 57 (68)
T ss_dssp SSCCSSSSSSCCCCEE---TTTTBCCSCTTHHHH-------CSSCTTTCCCCC
T ss_pred CCCCCCcCcCCCCEEE---ECCCChhhhHHHHhc-------CCCCCCCCcchh
Confidence 4679999887554333 345554 66777752 378999998643
No 237
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=27.95 E-value=28 Score=29.76 Aligned_cols=34 Identities=24% Similarity=0.492 Sum_probs=23.2
Q ss_pred CcccccccccccccC-CCcEeccCCCccCHhHHHH
Q 005857 5 HSRSCGICLMDEGKS-IRGQIDSCDHYFCFVCIME 38 (673)
Q Consensus 5 Ed~~CpICLE~f~~~-~~~~Ld~CgH~FC~~CI~e 38 (673)
+...|.+|...|.-. .+--.-.|++.||..|...
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~ 53 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNR 53 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECCcccCC
Confidence 446799999988421 2234556999999888643
No 238
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=27.92 E-value=29 Score=29.14 Aligned_cols=35 Identities=23% Similarity=0.502 Sum_probs=23.5
Q ss_pred CCCcccccccccccccC-CCcEeccCCCccCHhHHH
Q 005857 3 GLHSRSCGICLMDEGKS-IRGQIDSCDHYFCFVCIM 37 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~-~~~~Ld~CgH~FC~~CI~ 37 (673)
..+...|.+|...|.-. .+--.-.||..||..|..
T Consensus 16 d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~ 51 (82)
T 2yw8_A 16 DDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSS 51 (82)
T ss_dssp CCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGC
T ss_pred CccCCcccCcCCcccCccccccCCCCCCEEChHHhC
Confidence 34456899999988421 122345599999988864
No 239
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=27.77 E-value=28 Score=31.66 Aligned_cols=33 Identities=21% Similarity=0.480 Sum_probs=22.6
Q ss_pred CcccccccccccccC-CCcEeccCCCccCHhHHH
Q 005857 5 HSRSCGICLMDEGKS-IRGQIDSCDHYFCFVCIM 37 (673)
Q Consensus 5 Ed~~CpICLE~f~~~-~~~~Ld~CgH~FC~~CI~ 37 (673)
+...|.+|...|.-. .+--+-.||+.||..|..
T Consensus 68 ~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~ 101 (125)
T 1joc_A 68 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSA 101 (125)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSC
T ss_pred CCCCCcCcCCccccccccccCCCCCeEEChHHhC
Confidence 446799999988421 122345699999988764
No 240
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=27.54 E-value=18 Score=30.58 Aligned_cols=32 Identities=19% Similarity=0.526 Sum_probs=25.0
Q ss_pred cccccccCCCCccccccccccccccccccccC
Q 005857 97 VRCNVCQGTTYESLLLLCDLCDTASHTYCVGM 128 (673)
Q Consensus 97 ~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~p 128 (673)
..|.+|.+......+.+|..|+..|+..|+..
T Consensus 4 ~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~ 35 (101)
T 2jun_A 4 VLCQFCDQDPAQDAVKTCVTCEVSYCDECLKA 35 (101)
T ss_dssp CBCTTCCSSSCCBCCEEETTTTEEECHHHHHH
T ss_pred CCCcCCCCCCCCCceEECCcCChHHhHHHCHH
Confidence 67999986433456788999999888888874
No 241
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=27.52 E-value=31 Score=27.42 Aligned_cols=15 Identities=40% Similarity=1.066 Sum_probs=11.1
Q ss_pred CCCCCCccCcCCCCcc
Q 005857 131 AVPEGDWFCHDCTVLR 146 (673)
Q Consensus 131 ~VP~gdW~Cp~Cr~~~ 146 (673)
.+| .+|.||.|...+
T Consensus 32 ~lP-~dw~CP~Cg~~K 46 (54)
T 4rxn_A 32 DIP-DDWVCPLCGVGK 46 (54)
T ss_dssp GSC-TTCBCTTTCCBG
T ss_pred HCC-CCCcCcCCCCcH
Confidence 344 479999998764
No 242
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=26.87 E-value=38 Score=36.31 Aligned_cols=48 Identities=25% Similarity=0.492 Sum_probs=32.5
Q ss_pred cccccccccccccCCCcEeccCCCccCHhHHH--HHH--HhcCCCCCCcccccc
Q 005857 6 SRSCGICLMDEGKSIRGQIDSCDHYFCFVCIM--EWA--KIESKCPMCKRRFTS 55 (673)
Q Consensus 6 d~~CpICLE~f~~~~~~~Ld~CgH~FC~~CI~--eWs--k~k~sCPlCRkeFt~ 55 (673)
++.|||=+..+. ..+.-..|.|.-||+-.. ... ...|.||+|.+.+..
T Consensus 215 SL~CPlS~~ri~--~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~ 266 (360)
T 4fo9_A 215 SLMCPLGKMRLT--IPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAY 266 (360)
T ss_dssp ESBCTTTCSBCS--SEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCG
T ss_pred eeeCCCccceec--cCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCH
Confidence 357998887773 335556699998887632 222 236899999987654
No 243
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=26.85 E-value=17 Score=26.10 Aligned_cols=23 Identities=48% Similarity=1.224 Sum_probs=15.1
Q ss_pred cccccCCC---CCCCCCccCcCCCCc
Q 005857 123 TYCVGMGN---AVPEGDWFCHDCTVL 145 (673)
Q Consensus 123 ~~CL~pp~---~VP~gdW~Cp~Cr~~ 145 (673)
+||+...+ +.-+|+|.|..|...
T Consensus 2 tycielgercpnpregdwcchkcvpe 27 (36)
T 4b2u_A 2 TYCIELGERCPNPREGDWCCHKCVPE 27 (36)
T ss_dssp CSSCCTTSBCCCGGGCCSSSSEEEEE
T ss_pred ceeeeccccCcCCCccCeeeeccccc
Confidence 35666542 233799999999753
No 244
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.78 E-value=31 Score=29.01 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=23.1
Q ss_pred CCCCcccccccccccccC-CCcEeccCCCccCHhHH
Q 005857 2 EGLHSRSCGICLMDEGKS-IRGQIDSCDHYFCFVCI 36 (673)
Q Consensus 2 e~~Ed~~CpICLE~f~~~-~~~~Ld~CgH~FC~~CI 36 (673)
+..+...|.+|...|.-- .+--.-.|+..||..|.
T Consensus 10 pd~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs 45 (84)
T 1x4u_A 10 PTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCC 45 (84)
T ss_dssp SCCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTS
T ss_pred cCCCCCcCcCcCCccccchhhhhhcCCCcEEChhhc
Confidence 344557899999988421 11234459999998774
No 245
>2a7o_A Huntingtin interacting protein B; SRI domain, SRI, HSRI, SET2, HSET2, phosphoctd associating protein, SET2 RPB1-interacting domain, PCID, PCAP; NMR {Homo sapiens}
Probab=26.19 E-value=76 Score=28.83 Aligned_cols=42 Identities=17% Similarity=0.328 Sum_probs=34.4
Q ss_pred hhhHHHHHHHHHHhcccccccc-cc----chHHHHHHHHHhhHHHHH
Q 005857 566 DHAKCEIQSLVKLNLKCLSRDK-RL----EYDAFKKVAKLATHTILA 607 (673)
Q Consensus 566 ~~~k~~i~~~v~~~lk~l~~dk-~~----g~~~fk~var~athtila 607 (673)
..-+.||+..|...|++.-.++ .+ -.+.||-+||--||.|+.
T Consensus 20 ~~Fr~eis~~Vv~~L~pYRk~~Ck~GRITs~EDFK~LaRKLTh~V~~ 66 (112)
T 2a7o_A 20 EVFRKEMSQFIVQCLNPYRKPDCKVGRITTTEDFKHLARKLTHGVMN 66 (112)
T ss_dssp HHHHHHHHHHHHHHHTTTSSTTCSSSBCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccCccccCccccHHHHHHHHHHHHHHHHH
Confidence 3567899999999999987664 22 357899999999999985
No 246
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=26.19 E-value=29 Score=32.88 Aligned_cols=47 Identities=21% Similarity=0.402 Sum_probs=30.9
Q ss_pred Ccccccccccccc--cCCCcEeccCCCccCHhHHHHHH--HhcCCCCCCccc
Q 005857 5 HSRSCGICLMDEG--KSIRGQIDSCDHYFCFVCIMEWA--KIESKCPMCKRR 52 (673)
Q Consensus 5 Ed~~CpICLE~f~--~~~~~~Ld~CgH~FC~~CI~eWs--k~k~sCPlCRke 52 (673)
.+..|.+|...|. ...-..+.-|.|.+|..|=. |. +..+.|-+|.+.
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~-~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSH-AHPEEQGWLCDPCHLA 117 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEE-CCSSSSSCEEHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhccccc-ccCCCCcEeeHHHHHH
Confidence 5678999999873 22334567799999988852 22 223556666554
No 247
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=25.17 E-value=26 Score=28.32 Aligned_cols=41 Identities=17% Similarity=0.412 Sum_probs=28.5
Q ss_pred ccccccccCCCCccccccccccccc-cccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTA-SHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~a-fH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|.+......++ .|+.. ||..|+.. + +.||.|+..-
T Consensus 24 ~~~C~iC~~~~~~~~~~---pCgH~~~C~~C~~~---~----~~CP~Cr~~i 65 (74)
T 4ic3_A 24 EKLCKICMDRNIAIVFV---PCGHLVTCKQCAEA---V----DKCPMCYTVI 65 (74)
T ss_dssp HTBCTTTSSSBCCEEEE---TTCCBCCCHHHHTT---C----SBCTTTCCBC
T ss_pred CCCCCCCCCCCCCEEEc---CCCChhHHHHhhhc---C----ccCCCcCcCc
Confidence 35799999775543333 67776 88888752 2 7899999754
No 248
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=24.85 E-value=14 Score=31.68 Aligned_cols=46 Identities=20% Similarity=0.308 Sum_probs=30.1
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|.+.-.... ....|+..||..|+.... ...-.||.|+..-
T Consensus 15 ~~~C~IC~~~~~~p~--~~~~CgH~fC~~Ci~~~~---~~~~~CP~Cr~~~ 60 (108)
T 2ckl_A 15 HLMCVLCGGYFIDAT--TIIECLHSFCKTCIVRYL---ETSKYCPICDVQV 60 (108)
T ss_dssp GTBCTTTSSBCSSEE--EETTTCCEEEHHHHHHHH---TSCSBCTTTCCBS
T ss_pred cCCCccCChHHhCcC--EeCCCCChhhHHHHHHHH---HhCCcCcCCCccc
Confidence 367999987644332 224788889999986320 1125799998753
No 249
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=24.23 E-value=38 Score=27.71 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=22.1
Q ss_pred CcccccccccccccC-CCcEeccCCCccCHhHHH
Q 005857 5 HSRSCGICLMDEGKS-IRGQIDSCDHYFCFVCIM 37 (673)
Q Consensus 5 Ed~~CpICLE~f~~~-~~~~Ld~CgH~FC~~CI~ 37 (673)
++..|.+|...|.-- .+--.-.||+.||..|..
T Consensus 10 ~~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 10 DSDACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp CCSBCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred cCCcccCCCCccCCccccccCCCCCEEEcccccC
Confidence 356899999988421 122345589999988753
No 250
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=24.18 E-value=32 Score=28.40 Aligned_cols=41 Identities=20% Similarity=0.376 Sum_probs=27.8
Q ss_pred cccccccCCCCccccccccccccc-cccccccCCCCCCCCCccCcCCCCccc
Q 005857 97 VRCNVCQGTTYESLLLLCDLCDTA-SHTYCVGMGNAVPEGDWFCHDCTVLRD 147 (673)
Q Consensus 97 ~~CsVC~~~d~ee~LL~CD~Cd~a-fH~~CL~pp~~VP~gdW~Cp~Cr~~~~ 147 (673)
..|.+|.+......++ .|+.. ++..|+.. -|.||.|+..-.
T Consensus 19 ~~C~IC~~~~~~~v~~---pCgH~~~C~~C~~~-------~~~CP~Cr~~i~ 60 (79)
T 2yho_A 19 MLCMVCCEEEINSTFC---PCGHTVCCESCAAQ-------LQSCPVCRSRVE 60 (79)
T ss_dssp TBCTTTSSSBCCEEEE---TTCBCCBCHHHHTT-------CSBCTTTCCBCC
T ss_pred CEeEEeCcccCcEEEE---CCCCHHHHHHHHHh-------cCcCCCCCchhh
Confidence 5799998765443333 56665 77777752 279999998643
No 251
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=24.03 E-value=13 Score=40.89 Aligned_cols=45 Identities=20% Similarity=0.417 Sum_probs=32.3
Q ss_pred ccccccccccc-cCCCcEeccCCCccCHhHHHHHH---H--hcCCCCCCccc
Q 005857 7 RSCGICLMDEG-KSIRGQIDSCDHYFCFVCIMEWA---K--IESKCPMCKRR 52 (673)
Q Consensus 7 ~~CpICLE~f~-~~~~~~Ld~CgH~FC~~CI~eWs---k--~k~sCPlCRke 52 (673)
..| ||...+. ......++.|..+||..|+.--. . ....||.|+..
T Consensus 6 ~yC-iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~ 56 (447)
T 3kv4_A 6 VYC-LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVL 56 (447)
T ss_dssp EET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHH
T ss_pred eEE-eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccc
Confidence 445 8988764 34556788899999999985322 1 35899999765
No 252
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=24.01 E-value=62 Score=25.35 Aligned_cols=15 Identities=33% Similarity=0.986 Sum_probs=11.1
Q ss_pred CCCCCCccCcCCCCcc
Q 005857 131 AVPEGDWFCHDCTVLR 146 (673)
Q Consensus 131 ~VP~gdW~Cp~Cr~~~ 146 (673)
.+| .+|.||.|...+
T Consensus 32 ~lP-~dw~CP~Cg~~K 46 (52)
T 1e8j_A 32 DLP-DDWACPVCGASK 46 (52)
T ss_dssp SSC-TTCCCSSSCCCT
T ss_pred HCC-CCCcCCCCCCcH
Confidence 344 479999998764
No 253
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=23.41 E-value=38 Score=28.19 Aligned_cols=34 Identities=24% Similarity=0.443 Sum_probs=26.1
Q ss_pred CCCcccccccccccccCCCcEeccC-CCccCHhHHHHHH
Q 005857 3 GLHSRSCGICLMDEGKSIRGQIDSC-DHYFCFVCIMEWA 40 (673)
Q Consensus 3 ~~Ed~~CpICLE~f~~~~~~~Ld~C-gH~FC~~CI~eWs 40 (673)
..+..-|-||.+.- ...+..| +-.||..|.++..
T Consensus 5 ~ee~pWC~ICneDA----tlrC~gCdgDLYC~rC~rE~H 39 (67)
T 2d8v_A 5 SSGLPWCCICNEDA----TLRCAGCDGDLYCARCFREGH 39 (67)
T ss_dssp CCCCSSCTTTCSCC----CEEETTTTSEEECSSHHHHHT
T ss_pred CcCCCeeEEeCCCC----eEEecCCCCceehHHHHHHHc
Confidence 44556799999953 3677889 8899999998754
No 254
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=22.54 E-value=47 Score=28.52 Aligned_cols=16 Identities=38% Similarity=1.128 Sum_probs=11.7
Q ss_pred CCCCCCccCcCCCCccc
Q 005857 131 AVPEGDWFCHDCTVLRD 147 (673)
Q Consensus 131 ~VP~gdW~Cp~Cr~~~~ 147 (673)
.+| .+|.||.|...+.
T Consensus 56 dlP-ddW~CPvCga~K~ 71 (81)
T 2kn9_A 56 DIP-DDWSCPDCGAAKS 71 (81)
T ss_dssp TSC-TTCCCTTTCCCGG
T ss_pred HCC-CCCcCCCCCCCHH
Confidence 444 4799999987653
No 255
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=22.46 E-value=15 Score=34.00 Aligned_cols=46 Identities=17% Similarity=0.346 Sum_probs=30.7
Q ss_pred ccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCcc
Q 005857 96 YVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVLR 146 (673)
Q Consensus 96 ~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~~ 146 (673)
...|.+|.+.-..... -.|+..||..|+... +-.+...||.|+...
T Consensus 78 ~~~C~IC~~~~~~pv~---~~CgH~fC~~Ci~~~--~~~~~~~CP~Cr~~~ 123 (150)
T 1z6u_A 78 SFMCVCCQELVYQPVT---TECFHNVCKDCLQRS--FKAQVFSCPACRHDL 123 (150)
T ss_dssp HTBCTTTSSBCSSEEE---CTTSCEEEHHHHHHH--HHTTCCBCTTTCCBC
T ss_pred CCEeecCChhhcCCEE---cCCCCchhHHHHHHH--HHhCCCcCCCCCccC
Confidence 4679999876544333 378888899998632 111335799999764
No 256
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=21.76 E-value=58 Score=27.06 Aligned_cols=15 Identities=13% Similarity=0.689 Sum_probs=11.2
Q ss_pred CCCCCccCcCCCCccc
Q 005857 132 VPEGDWFCHDCTVLRD 147 (673)
Q Consensus 132 VP~gdW~Cp~Cr~~~~ 147 (673)
+| .+|.||.|...+.
T Consensus 37 lP-ddw~CP~Cga~K~ 51 (70)
T 1dx8_A 37 LS-DSFMCPACRSPKN 51 (70)
T ss_dssp SC-TTCBCTTTCCBGG
T ss_pred CC-CCCcCCCCCCCHH
Confidence 44 4799999998653
No 257
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=21.08 E-value=56 Score=25.89 Aligned_cols=13 Identities=46% Similarity=1.099 Sum_probs=10.3
Q ss_pred CCccCcCCCCccc
Q 005857 135 GDWFCHDCTVLRD 147 (673)
Q Consensus 135 gdW~Cp~Cr~~~~ 147 (673)
.+|.||.|...+.
T Consensus 35 ~dw~CP~Cga~K~ 47 (55)
T 2v3b_B 35 ADWVCPDCGVGKI 47 (55)
T ss_dssp TTCCCTTTCCCGG
T ss_pred CCCcCCCCCCCHH
Confidence 4799999987643
No 258
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=21.00 E-value=37 Score=33.54 Aligned_cols=32 Identities=22% Similarity=0.567 Sum_probs=20.5
Q ss_pred CcccccccccccccC-CCcEeccCCCccCHhHH
Q 005857 5 HSRSCGICLMDEGKS-IRGQIDSCDHYFCFVCI 36 (673)
Q Consensus 5 Ed~~CpICLE~f~~~-~~~~Ld~CgH~FC~~CI 36 (673)
++..|.+|...|.-. .+--+-.||+.||..|-
T Consensus 163 ~~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs 195 (226)
T 3zyq_A 163 DAEECHRCRVQFGVMTRKHHCRACGQIFCGKCS 195 (226)
T ss_dssp CCSBCTTTCCBCBTTBCCEECTTTCCEECTTTC
T ss_pred cCCCCcCcCCCCCccccccccCCCcCEeChhhc
Confidence 456899998888421 12334558888887664
No 259
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=20.49 E-value=37 Score=24.12 Aligned_cols=13 Identities=31% Similarity=1.071 Sum_probs=10.3
Q ss_pred CCCCccCcCCCCc
Q 005857 133 PEGDWFCHDCTVL 145 (673)
Q Consensus 133 P~gdW~Cp~Cr~~ 145 (673)
-.|||.|+.|...
T Consensus 3 ~~gDW~C~~C~~~ 15 (33)
T 2k1p_A 3 SANDWQCKTCSNV 15 (33)
T ss_dssp SSSSCBCSSSCCB
T ss_pred CCCCcccCCCCCc
Confidence 3689999999653
No 260
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=20.44 E-value=37 Score=29.62 Aligned_cols=46 Identities=13% Similarity=0.276 Sum_probs=29.7
Q ss_pred cccccccccCCCCccccccccccccccccccccCCCCCCCCCccCcCCCCc
Q 005857 95 AYVRCNVCQGTTYESLLLLCDLCDTASHTYCVGMGNAVPEGDWFCHDCTVL 145 (673)
Q Consensus 95 e~~~CsVC~~~d~ee~LL~CD~Cd~afH~~CL~pp~~VP~gdW~Cp~Cr~~ 145 (673)
+...|.+|...-.....+ .|+..||..|+..- +......||.|+..
T Consensus 17 ~~~~C~IC~~~~~~p~~~---~CgH~fC~~Ci~~~--~~~~~~~CP~Cr~~ 62 (118)
T 3hct_A 17 SKYECPICLMALREAVQT---PCGHRFCKACIIKS--IRDAGHKCPVDNEI 62 (118)
T ss_dssp GGGBCTTTCSBCSSEEEC---TTSCEEEHHHHHHH--HHHHCSBCTTTCCB
T ss_pred CCCCCCcCChhhcCeEEC---CcCChhhHHHHHHH--HhhCCCCCCCCCCC
Confidence 346799998765443332 68889999998632 00112379999864
No 261
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=20.22 E-value=33 Score=31.73 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=22.2
Q ss_pred CCcccccccccccc--cCCCcEeccCCCccCHhHH
Q 005857 4 LHSRSCGICLMDEG--KSIRGQIDSCDHYFCFVCI 36 (673)
Q Consensus 4 ~Ed~~CpICLE~f~--~~~~~~Ld~CgH~FC~~CI 36 (673)
..+..|.+|...|. ...-..+.-|.|.+|..|=
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~ 87 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG 87 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccC
Confidence 45678999999883 1122355668888887664
Done!