BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005858
(673 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359489272|ref|XP_002274161.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Vitis
vinifera]
Length = 876
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/710 (69%), Positives = 555/710 (78%), Gaps = 37/710 (5%)
Query: 1 MKYKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL 60
M Y++RL AAK++ D D R PV+ EFGVTA LKPHQVEG+SWLIRRYLLGVNV+L
Sbjct: 1 MNYEQRLIAAAKLVLDGDARAEDAPVNWGEFGVTATLKPHQVEGVSWLIRRYLLGVNVVL 60
Query: 61 GDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGE 120
GDEMGLGKTLQAISFLSY+K Q SPGPFLVLCPLSVTDGWVSE+A F PKL VLRYVG+
Sbjct: 61 GDEMGLGKTLQAISFLSYMKVHQKSPGPFLVLCPLSVTDGWVSEIANFAPKLRVLRYVGD 120
Query: 121 REQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQ 180
+E RR++RRT+YE VKEQ S+VS LPFD+LLTTYD+ LMDQ FLSQIPW Y IIDEAQ
Sbjct: 121 KEHRRSLRRTIYEQVKEQCSKSDVSALPFDLLLTTYDIALMDQHFLSQIPWHYAIIDEAQ 180
Query: 181 RLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFK 240
RLKNPSSVLYNVL+E F+MPRRLLMTGTPIQNNL+ELWALMHFCMPS+FGTL QFLSTFK
Sbjct: 181 RLKNPSSVLYNVLKERFVMPRRLLMTGTPIQNNLTELWALMHFCMPSIFGTLEQFLSTFK 240
Query: 241 DAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------L 294
+ H SS K ++K+QF +LK IL AFMLRR K KL+ECG L+LPPLTEITV L
Sbjct: 241 EDGHPSSGEKVAEVKDQFRTLKYILGAFMLRRMKSKLIECGTLVLPPLTEITVMAPLVSL 300
Query: 295 QKKVYASILRKELPKLLALSSRTANHQSLQNT---------------------------- 326
QKKVY SILRKELPKLLA SS + HQSLQN
Sbjct: 301 QKKVYMSILRKELPKLLAFSSGPSGHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHL 360
Query: 327 --ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEER 384
ASGKL++LD LL+KLYNSGHRVLLFAQMT TLDILQDF+ELRKYSYERLDGS+RAEER
Sbjct: 361 VQASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLDGSVRAEER 420
Query: 385 FAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 444
F+AIR FS Q L S+ + AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK
Sbjct: 421 FSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 480
Query: 445 QALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAV 504
QALQRAHRIGQMNHVLSINLVT TVEE+IMRRAERKL+LSHNVVG+ +DRE KE
Sbjct: 481 QALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVGEVDIDREGKEMAGA 540
Query: 505 ETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNP 564
E DLRS+IFGL + DP INN+ES + +S L++M +KV+A+RHEQ GK RKFEVNP
Sbjct: 541 EAGDLRSVIFGLRMIDPSEINNDESSEPNMSELDAMADKVVAIRHEQQLGKDDRKFEVNP 600
Query: 565 VALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESG-RRRSPEDK 623
+ LL+ DL+M S S P LDEASY WVEKFKEAS+SS + I + G RR+ PE+K
Sbjct: 601 MDLLKGHDLIMDRSSVSVDFDPGLDEASYLVWVEKFKEASQSSDDPIIQVGNRRKLPEEK 660
Query: 624 QRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
KLEAAR+KAEE+KLAKWEA+GY SLSVK P DM+SDSGSV FV
Sbjct: 661 LLKLEAARKKAEEEKLAKWEAHGYNSLSVKDPPSHVDVDMISDSGSVDFV 710
>gi|297734575|emb|CBI16626.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/709 (65%), Positives = 521/709 (73%), Gaps = 79/709 (11%)
Query: 1 MKYKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL 60
M Y++RL AAK++ D D R PV+ EFGVTA LKPHQVEG+SWLIRRYLLGVNV+L
Sbjct: 1 MNYEQRLIAAAKLVLDGDARAEDAPVNWGEFGVTATLKPHQVEGVSWLIRRYLLGVNVVL 60
Query: 61 GDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGE 120
G MGLGKTLQAISFLSY+K Q SPGPFLVLCPLSVTDGWVSE+A F PKL VLRYVG+
Sbjct: 61 G-RMGLGKTLQAISFLSYMKVHQKSPGPFLVLCPLSVTDGWVSEIANFAPKLRVLRYVGD 119
Query: 121 REQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQ 180
+E RR++RRT+YE VKEQ S+VS LPFD+LLTTYD+ LMDQ FLSQIPW Y IIDEAQ
Sbjct: 120 KEHRRSLRRTIYEQVKEQCSKSDVSALPFDLLLTTYDIALMDQHFLSQIPWHYAIIDEAQ 179
Query: 181 RLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFK 240
RLKNPSSVLYNVL+E F+MPRRLLMTGTPIQNNL+ELWALMHFCMPS+FGTL QFLSTFK
Sbjct: 180 RLKNPSSVLYNVLKERFVMPRRLLMTGTPIQNNLTELWALMHFCMPSIFGTLEQFLSTFK 239
Query: 241 DAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------L 294
+ H SS K ++K+QF +LK IL AFMLRR K KL+ECG L+LPPLTEITV L
Sbjct: 240 EDGHPSSGEKVAEVKDQFRTLKYILGAFMLRRMKSKLIECGTLVLPPLTEITVMAPLVSL 299
Query: 295 QKKVYASILRKELPKLLALSSRTANHQSLQNT---------------------------- 326
QKKVY SILRKELPKLLA SS + HQSLQN
Sbjct: 300 QKKVYMSILRKELPKLLAFSSGPSGHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHL 359
Query: 327 --ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEER 384
ASGKL++LD LL+KLYNSGHRVLLFAQMT TLDILQDF+ELRKYSYERLDGS+RAEER
Sbjct: 360 VQASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDFMELRKYSYERLDGSVRAEER 419
Query: 385 FAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 444
F+AIR FS Q L S+ + AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK
Sbjct: 420 FSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 479
Query: 445 QALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAV 504
QALQRAHRIGQMNHVLSINLVT TVEE+IMRRAERKL+LSHNVVG+ +DRE KE
Sbjct: 480 QALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQLSHNVVGEVDIDREGKEMAGA 539
Query: 505 ETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNP 564
E DLRS+IFGL + DP INN+ES + +S L++M +KV+A+RHEQ GK RKFEVNP
Sbjct: 540 EAGDLRSVIFGLRMIDPSEINNDESSEPNMSELDAMADKVVAIRHEQQLGKDDRKFEVNP 599
Query: 565 VALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRRSPEDKQ 624
+ LL+ DL+M S S P
Sbjct: 600 MDLLKGHDLIMDRSSVSVDFDP-------------------------------------- 621
Query: 625 RKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
AAR+KAEE+KLAKWEA+GY SLSVK P DM+SDSGSV FV
Sbjct: 622 ----AARKKAEEEKLAKWEAHGYNSLSVKDPPSHVDVDMISDSGSVDFV 666
>gi|255541128|ref|XP_002511628.1| helicase, putative [Ricinus communis]
gi|223548808|gb|EEF50297.1| helicase, putative [Ricinus communis]
Length = 860
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/710 (65%), Positives = 543/710 (76%), Gaps = 49/710 (6%)
Query: 1 MKYKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL 60
M Y++R+ AA II D D R ++AAE GVTA LKPHQVEG+ WLIRRYLLGVNV+L
Sbjct: 1 MDYEQRIMTAASIIIDADARADDVTINAAEIGVTATLKPHQVEGVFWLIRRYLLGVNVIL 60
Query: 61 GDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGE 120
GDEMGLGKTLQA+ FLSYLK Q+S GPFLVLCPLSVTDGW+SEMAKFTPKL+ LRYVG+
Sbjct: 61 GDEMGLGKTLQAVCFLSYLKAQQISAGPFLVLCPLSVTDGWISEMAKFTPKLKALRYVGD 120
Query: 121 REQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQ 180
++ RRN+RR MY+HVK ++ S LPFDVLLTTYD+ LMDQ FLSQIPW Y IIDEAQ
Sbjct: 121 KDHRRNLRRNMYQHVKNHPSSTDGSLLPFDVLLTTYDIALMDQNFLSQIPWHYAIIDEAQ 180
Query: 181 RLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFK 240
RLKNPSSVLYNVL E FLMPRRLLMTGTP+QNNL ELW LMHFCMPSVFGTL QFLSTFK
Sbjct: 181 RLKNPSSVLYNVLNERFLMPRRLLMTGTPMQNNLIELWVLMHFCMPSVFGTLEQFLSTFK 240
Query: 241 DAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------L 294
+A +S KIK+Q +LK +L+AFM+RRTK KL+E G L+LPPLTE+TV L
Sbjct: 241 EAGDPTSDLDAAKIKKQLKTLKCMLTAFMIRRTKSKLIEAGDLVLPPLTEVTVMAPLVSL 300
Query: 295 QKKVYASILRKELPKLLALSSRTANHQSLQNT---------------------------- 326
QK+VY SILRKELPKLLALSS +NHQSLQN
Sbjct: 301 QKRVYMSILRKELPKLLALSSAASNHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHL 360
Query: 327 --ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEER 384
ASGKL++LD LLKKL+ SGHRV++FAQMT TLDILQDFLELRKYSYERLDGSIRAEER
Sbjct: 361 VQASGKLIILDQLLKKLHGSGHRVIIFAQMTHTLDILQDFLELRKYSYERLDGSIRAEER 420
Query: 385 FAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 444
FAAIR FS Q+ +AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK
Sbjct: 421 FAAIRSFSGQAM-----------NAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 469
Query: 445 QALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAV 504
QA+QRAHRIGQMNHVLSINLVT HTVEEVIMRRAE+KL+LS+NV+GDDV++++ KE V
Sbjct: 470 QAVQRAHRIGQMNHVLSINLVTRHTVEEVIMRRAEKKLQLSNNVLGDDVMEQKGKEPVGV 529
Query: 505 ETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNP 564
ET DLRSIIFGLH+FDP I E+ D+L + LN+M+ KVI +R +Q K G K++++
Sbjct: 530 ETVDLRSIIFGLHIFDPSEIITEKPDELNMPELNAMIVKVIGIRDDQGLAKDGGKYKLDQ 589
Query: 565 VALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRRS-PEDK 623
V + D++ + A P LDEASY SWVE+FKEAS+SS N + + G RRS PEDK
Sbjct: 590 VDQKKGFDVVTGGNSAFINYDPGLDEASYLSWVERFKEASQSSGNMVLDLGHRRSLPEDK 649
Query: 624 QRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
KLEAA++KAEEKKL KWE+ GY SLSVK P GD++S+SG + FV
Sbjct: 650 HLKLEAAKKKAEEKKLNKWESLGYHSLSVKDPEAV-DGDVLSESGFLHFV 698
>gi|224136306|ref|XP_002326828.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222835143|gb|EEE73578.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 866
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/715 (65%), Positives = 545/715 (76%), Gaps = 53/715 (7%)
Query: 1 MKYKERLQVAAKIIHDNDERD---GQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVN 57
M Y++RL A II + +P DA E GVTA LKPHQ+EG+SWLI+RY LGVN
Sbjct: 1 MNYEQRLAAATMIIESKSHGESGYATSPFDATEIGVTATLKPHQLEGISWLIQRYHLGVN 60
Query: 58 VLLGD--EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVL 115
V+L +MGLGKTLQAISFLSYLK Q SPGP+LVLCPLSVTDGWVSE+ KFTPKL+VL
Sbjct: 61 VILDICWQMGLGKTLQAISFLSYLKVHQKSPGPYLVLCPLSVTDGWVSEIDKFTPKLKVL 120
Query: 116 RYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTI 175
RYVGE+E +R++R+T++EHV S LPFDVLLTTYD+ L+DQ FLSQIPW Y I
Sbjct: 121 RYVGEKEHQRSLRKTIHEHV---------SLLPFDVLLTTYDIALVDQEFLSQIPWHYAI 171
Query: 176 IDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQF 235
+DEAQRLKNP SVLYNVL + FLMPRRLLMTGTPIQNNL+ELWALMHFCMP VFGTL+QF
Sbjct: 172 VDEAQRLKNPKSVLYNVLIDQFLMPRRLLMTGTPIQNNLTELWALMHFCMPLVFGTLDQF 231
Query: 236 LSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV-- 293
LSTF++A +SS K+K QF +LK IL +FMLRRTK +L+ECG+L+LP LTEITV
Sbjct: 232 LSTFREAADASSDHDATKVKRQFKTLKSILKSFMLRRTKSRLIECGNLVLPSLTEITVMA 291
Query: 294 ----LQKKVYASILRKELPKLLALSSRTANHQSLQNT----------------------- 326
LQKKVY SILRKELPKLLALSS +NHQSLQN
Sbjct: 292 PLVSLQKKVYTSILRKELPKLLALSSSASNHQSLQNMVIQLRKACSHPYLFPGIEPEPYE 351
Query: 327 -------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSI 379
ASGKL++LD LL+KL++SGHRVLLFAQMT TLDILQDFLELRKYSYERLDGS+
Sbjct: 352 EGEHLVKASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSV 411
Query: 380 RAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWN 439
RAEERFAAIR FS QS R SE+ N +FVFMISTRAGGVGLNLVAADTVIFYEQDWN
Sbjct: 412 RAEERFAAIRSFSGQSG--RSGSESDQNSSFVFMISTRAGGVGLNLVAADTVIFYEQDWN 469
Query: 440 PQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVK 499
PQVDKQALQRAHRIGQMNHVLSINLVT H+VEEVIM+RA+RKL+LSH+VVGDDV++ + K
Sbjct: 470 PQVDKQALQRAHRIGQMNHVLSINLVTRHSVEEVIMQRAKRKLQLSHDVVGDDVMEEDRK 529
Query: 500 ERTAVETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRK 559
E +ET DLRSIIFGLH FDP +N+E+S++L S L ++ +KVIA+R +Q+ K RK
Sbjct: 530 ETGGIETGDLRSIIFGLHRFDPSEVNSEKSNELNASELKALAQKVIALRCDQILDKDDRK 589
Query: 560 FEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRRS 619
FEVNP+ + D + A A+ P LDEASY SWVEKFKE S+S+ N + + G RR+
Sbjct: 590 FEVNPIGQEKGLDFVSGGESALASYDPGLDEASYLSWVEKFKETSQSNENLVMDLGNRRN 649
Query: 620 -PEDKQRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
P++K LEAA++KAEEKKL+KWEA GY SLSV P+ GD +SDSG V FV
Sbjct: 650 LPDNKYLNLEAAKKKAEEKKLSKWEALGYHSLSVGDPIYPVDGDALSDSGFVHFV 704
>gi|147866122|emb|CAN83037.1| hypothetical protein VITISV_034336 [Vitis vinifera]
Length = 1054
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/790 (59%), Positives = 540/790 (68%), Gaps = 117/790 (14%)
Query: 1 MKYKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL 60
M Y++RL AAK++ D D R PV+ EFGVTA LKPHQVEG+SWLIRRYLLGVNV+L
Sbjct: 1 MNYEQRLIAAAKLVLDGDARAEDAPVNWGEFGVTATLKPHQVEGVSWLIRRYLLGVNVVL 60
Query: 61 G--------DEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKL 112
G DEMGLGKTLQAISFLSY+K Q SPGPFLVLCPLSVTDGWVSE+A F PKL
Sbjct: 61 GRVFIVYAGDEMGLGKTLQAISFLSYMKVHQKSPGPFLVLCPLSVTDGWVSEIANFAPKL 120
Query: 113 EVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWC 172
VLRYVG++E RR++RRT+YE VKEQ S+VS LPFD+LLTTYD+ LMDQ FLSQIPW
Sbjct: 121 RVLRYVGDKEHRRSLRRTIYEQVKEQCSKSDVSALPFDLLLTTYDIALMDQHFLSQIPWH 180
Query: 173 YTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTL 232
Y IIDEAQRLKNPSSVLYNVL+E F+MPRRLLMTGTPIQNNL+ELWALMHFCMPS+FGTL
Sbjct: 181 YAIIDEAQRLKNPSSVLYNVLKERFVMPRRLLMTGTPIQNNLTELWALMHFCMPSIFGTL 240
Query: 233 NQFLSTFKDAVHSSS--------------------------------------APKRGKI 254
QFLSTFK+ H SS K ++
Sbjct: 241 EQFLSTFKEDGHPSSVRGVLLSWRRSFVGKKRTKAWERLICSYVELYGSKAIRGEKVAEV 300
Query: 255 KEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELP 308
K+QF +LK IL AFMLRR K KL+ECG L+LPPLTEITV LQKKVY SILRKELP
Sbjct: 301 KDQFRTLKYILGAFMLRRMKSKLIECGTLVLPPLTEITVMAPLVSLQKKVYMSILRKELP 360
Query: 309 KLLALSSRTAN--------------------HQSLQNTASGKL------VVLDLLLKK-- 340
KLLA SS ++ L N +G L V + L+K
Sbjct: 361 KLLAFSSGPSDTFEIHIFCAGFSSLLWCICHFLDLSNACNGFLRINFASTVQVIQLRKAC 420
Query: 341 -------------------LYNSGHRVLLFAQMTQTL-----------------DILQDF 364
L + ++++ Q+ Q L DILQDF
Sbjct: 421 SHPYLFPGIEPEPYEEGEHLVQASGKLIILDQLLQKLYNSGHRVLLFAQMTHTLDILQDF 480
Query: 365 LELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLN 424
+ELRKYSYERLDGS+RAEERF+AIR FS Q L S+ + AFVFMISTRAGGVGLN
Sbjct: 481 MELRKYSYERLDGSVRAEERFSAIRSFSRQIVEGSLNSQDVQSSAFVFMISTRAGGVGLN 540
Query: 425 LVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRL 484
LVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT TVEE+IMRRAERKL+L
Sbjct: 541 LVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTGRTVEEIIMRRAERKLQL 600
Query: 485 SHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKV 544
SHNVVG+ +DRE KE E DLRS+IFGL + DP INN+ES + +S L++M +KV
Sbjct: 601 SHNVVGEVDIDREGKEMAGAEAGDLRSVIFGLRMIDPSEINNDESSEPNMSELDAMADKV 660
Query: 545 IAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEAS 604
+A+RHEQ GK RKFEVNP+ LL+ DL+M S S P LDEASY WVEKFKEAS
Sbjct: 661 VAIRHEQQLGKDDRKFEVNPMDLLKGHDLIMDRSSVSVDFDPGLDEASYLVWVEKFKEAS 720
Query: 605 ESSSNTIAESG-RRRSPEDKQRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDM 663
+SS + I + G RR+ PE+K KLEAAR+KAEE+KLAKWEA+GY SLSVK P DM
Sbjct: 721 QSSDDPIIQVGNRRKLPEEKLLKLEAARKKAEEEKLAKWEAHGYNSLSVKDPPSHVDVDM 780
Query: 664 MSDSGSVQFV 673
+SDSGSV FV
Sbjct: 781 ISDSGSVDFV 790
>gi|145362201|ref|NP_973689.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
gi|330255399|gb|AEC10493.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
Length = 877
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/713 (62%), Positives = 544/713 (76%), Gaps = 58/713 (8%)
Query: 1 MKYKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL 60
M+Y+ RL+ AA+II + + + TP D +EFGVTA LKPHQVEG+SWLI++YLLGVNV+L
Sbjct: 15 MEYERRLEAAAEIILEKEAKFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVL 74
Query: 61 G-DEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVG 119
D+MGLGKTLQAISFLSYLKF Q PGPFLVLCPLSVTDGWVSE+ +FTP LEVLRYVG
Sbjct: 75 ELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVG 134
Query: 120 EREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEA 179
++ R ++R++MY+HVK+ S+ LPFDVLLTTYD+ L+DQ FLSQIPW Y IIDEA
Sbjct: 135 DKYCRLDMRKSMYDHVKKSSKGHF---LPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEA 191
Query: 180 QRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTF 239
QRLKNP+SVLYNVL E FL+PRRLL+TGTPIQNNL+ELWALMHFCMP VFGTL+QFLS F
Sbjct: 192 QRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAF 251
Query: 240 KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------ 293
K+ S KE + SLK IL AFMLRRTK L+E G+L+LPPLTE+TV
Sbjct: 252 KETGDGLSGLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVS 311
Query: 294 LQKKVYASILRKELPKLLALSSRTANHQSLQNT--------------------------- 326
LQKK+Y SILRKELP LL LSS +NH SLQN
Sbjct: 312 LQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEH 371
Query: 327 ---ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEE 383
ASGKL+VLD LLK+L++SGHRVLLF+QMT TLDILQDF+ELR+YSYERLDGS+RAEE
Sbjct: 372 LVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEE 431
Query: 384 RFAAIRHFSVQSAIER-LYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQV 442
RFAAI++FS ++ ER L SE G++AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQV
Sbjct: 432 RFAAIKNFSAKT--ERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQV 489
Query: 443 DKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERT 502
DKQALQRAHRIGQ++HVLSINLVTEH+VEEVI+RRAERKL+LSHNVVGD++ ++E
Sbjct: 490 DKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKE----- 544
Query: 503 AVETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEV 562
+ DLRS++FGL FDP+ I+NEESD+L++ ++S+ EKV+A+R K R+FE+
Sbjct: 545 -EDGGDLRSLVFGLQRFDPEEIHNEESDNLKMVEISSLAEKVVAIRQNVEPDKEERRFEI 603
Query: 563 NPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSN-TIAESGRRRS-P 620
N SD L+ + +SA+ +LDEASY SWVEK KEA+ SS + I E G R++
Sbjct: 604 N------SSDTLLGNT-SSASLDSELDEASYLSWVEKLKEAARSSKDEKIIELGNRKNLS 656
Query: 621 EDKQRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
E++ ++EAAR+KAEEKKLA W A+GYQSLSV+ P+ D SD+GSV FV
Sbjct: 657 EERNLRIEAARKKAEEKKLATWGAHGYQSLSVEEPILPDDVDSSSDAGSVNFV 709
>gi|297828221|ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp.
lyrata]
gi|297327832|gb|EFH58252.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp.
lyrata]
Length = 873
Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/713 (62%), Positives = 537/713 (75%), Gaps = 61/713 (8%)
Query: 1 MKYKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL 60
M+Y+ RL+ AAK I E++ ++P D EFGVTA LKPHQVEG+SWLI++YLLGVNV+L
Sbjct: 14 MEYERRLEAAAKFIL---EKEAKSPPDCREFGVTATLKPHQVEGVSWLIQKYLLGVNVVL 70
Query: 61 G-DEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVG 119
D+MGLGKTLQAISFLSYLKF Q PGPFLVLCPLSVTDGWVSE+ +FTP LEVLRYVG
Sbjct: 71 ELDQMGLGKTLQAISFLSYLKFHQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVG 130
Query: 120 EREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEA 179
++ RR++R++MY+HVK+ S+ LPFDVLLTTYD+ L+DQ FLSQIPW Y IIDEA
Sbjct: 131 DKYCRRDMRKSMYDHVKKSSKGH---LLPFDVLLTTYDIALVDQDFLSQIPWHYAIIDEA 187
Query: 180 QRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTF 239
QRLKNP+SVLYNVL + FL+PRRLL+TGTPIQNNL+ELWALMHFCMP VFG L+QFL F
Sbjct: 188 QRLKNPNSVLYNVLLDQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGALDQFLVAF 247
Query: 240 KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------ 293
K+ S KE + SLK IL AFMLRRTK L+E G+L+LPPLTE+TV
Sbjct: 248 KETGEGLSGLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVS 307
Query: 294 LQKKVYASILRKELPKLLALSSRTANHQSLQNT--------------------------- 326
LQKK+Y SILRKELP LLALSS +NH SLQN
Sbjct: 308 LQKKIYTSILRKELPGLLALSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEH 367
Query: 327 ---ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEE 383
ASGKL VLD LLK+L++ GHRVLLF+QMT TLDILQDF+ELR+YSYERLDGS+RAEE
Sbjct: 368 LVQASGKLFVLDQLLKRLHDIGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEE 427
Query: 384 RFAAIRHFSVQSAIER-LYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQV 442
RFAAI++FS +S ER L SE ++AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQV
Sbjct: 428 RFAAIKNFSAKS--ERGLDSEVDASNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQV 485
Query: 443 DKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERT 502
DKQALQRAHRIGQ++HVLSINLVTEH+VEEVI+RRAERKL+LSHNVVGD++ E
Sbjct: 486 DKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNM------EEK 539
Query: 503 AVETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEV 562
+ DLRS++FGL FDP+ I++EESD+L++ ++S+ EKV+A+R K RKF++
Sbjct: 540 DEDRGDLRSLVFGLQRFDPEEIHSEESDNLKMVEISSLAEKVVAIRQNVEPDKEARKFKI 599
Query: 563 NPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSN-TIAESGRRRS-P 620
+ SD L + +SA +LDEASY SWVEK K+AS SS + I E G R++
Sbjct: 600 D------SSDTL-RGNLSSACLDSELDEASYLSWVEKLKKASRSSKDEKIIELGNRKNLS 652
Query: 621 EDKQRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
E++ ++EAAR+KAEEKKLA WEA+GY+SLSV+ P+ D SD+GSV FV
Sbjct: 653 EERNLRIEAARKKAEEKKLASWEAHGYRSLSVEEPIFPDDVDSSSDAGSVNFV 705
>gi|42569923|ref|NP_182025.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
gi|330255398|gb|AEC10492.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
Length = 851
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/712 (61%), Positives = 533/712 (74%), Gaps = 75/712 (10%)
Query: 1 MKYKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL 60
M+Y+ RL+ AA+II + + + TP D +EFGVTA LKPHQVEG+SWLI++YLLGVNV+L
Sbjct: 15 MEYERRLEAAAEIILEKEAKFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVL 74
Query: 61 G-DEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVG 119
D+MGLGKTLQAISFLSYLKF Q PGPFLVLCPLSVTDGWVSE+ +FTP LEVLRYVG
Sbjct: 75 ELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVG 134
Query: 120 EREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEA 179
++ R ++R++MY+H LPFDVLLTTYD+ L+DQ FLSQIPW Y IIDEA
Sbjct: 135 DKYCRLDMRKSMYDHGHF---------LPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEA 185
Query: 180 QRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTF 239
QRLKNP+SVLYNVL E FL+PRRLL+TGTPIQNNL+ELWALMHFCMP VFGTL+QFLS F
Sbjct: 186 QRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAF 245
Query: 240 KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------ 293
K+ + KE + SLK IL AFMLRRTK L+E G+L+LPPLTE+TV
Sbjct: 246 KE---TGDGLDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVS 302
Query: 294 LQKKVYASILRKELPKLLALSSRTANHQSLQNT--------------------------- 326
LQKK+Y SILRKELP LL LSS +NH SLQN
Sbjct: 303 LQKKIYTSILRKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEH 362
Query: 327 ---ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEE 383
ASGKL+VLD LLK+L++SGHRVLLF+QMT TLDILQDF+ELR+YSYERLDGS+RAEE
Sbjct: 363 LVQASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEE 422
Query: 384 RFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVD 443
RFAAI++FSV G++AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVD
Sbjct: 423 RFAAIKNFSVD-----------GSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVD 471
Query: 444 KQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTA 503
KQALQRAHRIGQ++HVLSINLVTEH+VEEVI+RRAERKL+LSHNVVGD++ ++E
Sbjct: 472 KQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKE------ 525
Query: 504 VETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVN 563
+ DLRS++FGL FDP+ I+NEESD+L++ ++S+ EKV+A+R K R+FE+N
Sbjct: 526 EDGGDLRSLVFGLQRFDPEEIHNEESDNLKMVEISSLAEKVVAIRQNVEPDKEERRFEIN 585
Query: 564 PVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSN-TIAESGRRRS-PE 621
SD L+ + +SA+ +LDEASY SWVEK KEA+ SS + I E G R++ E
Sbjct: 586 ------SSDTLLGNT-SSASLDSELDEASYLSWVEKLKEAARSSKDEKIIELGNRKNLSE 638
Query: 622 DKQRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
++ ++EAAR+KAEEKKLA W A+GYQSLSV+ P+ D SD+GSV FV
Sbjct: 639 ERNLRIEAARKKAEEKKLATWGAHGYQSLSVEEPILPDDVDSSSDAGSVNFV 690
>gi|449445503|ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Cucumis sativus]
Length = 868
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/713 (61%), Positives = 525/713 (73%), Gaps = 56/713 (7%)
Query: 1 MKYKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL 60
M Y+ RL+ AAK+I +D + + +FGVTA LKP+Q++G+ WLIRRY LGVNV+L
Sbjct: 1 MNYERRLKAAAKLILLHDSGSDNSSESSPDFGVTATLKPYQIDGVQWLIRRYHLGVNVIL 60
Query: 61 GDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGE 120
GDEMGLGKTLQAISFLSYLK Q+SP PFLVLCPLSVTDGWVSE+ KF P L+VL+YVG+
Sbjct: 61 GDEMGLGKTLQAISFLSYLKVHQISPTPFLVLCPLSVTDGWVSEIVKFAPCLKVLQYVGD 120
Query: 121 REQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQ 180
+E RRN RR M EH EQ + PFD+LLTTYD+ LMDQ FLSQIPW Y +IDEAQ
Sbjct: 121 KETRRNARRRMCEHATEQPVSDAL--FPFDILLTTYDIALMDQDFLSQIPWQYAVIDEAQ 178
Query: 181 RLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFK 240
RLKNPSSVLYNVL E FL+PRRLLMTGTPIQNNLSELWAL+HFCMPSVFGTL+QF+S FK
Sbjct: 179 RLKNPSSVLYNVLLERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVFGTLDQFISIFK 238
Query: 241 DAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------L 294
D+ + + E F SLK +LS F+LRRTK KL E G L+LPPLTE TV L
Sbjct: 239 DSGDLTLGHGKMNGHEHFKSLKYVLSVFLLRRTKAKLSESGVLLLPPLTETTVMVPLVNL 298
Query: 295 QKKVYASILRKELPKLLALSSRTANHQSLQNT---------------------------- 326
Q+KVY S+LRKELPKLLA+S+ ++NHQSLQN
Sbjct: 299 QRKVYMSLLRKELPKLLAVSAGSSNHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHL 358
Query: 327 --ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEER 384
ASGKLVVLD LL+KL+ S HRVLLFAQMT TLDILQDFLELR +SYERLDGSIRAEER
Sbjct: 359 VQASGKLVVLDQLLQKLHESQHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEER 418
Query: 385 FAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 444
FAAIR FS S S+ NDAFVF+ISTRAGGVGLNLV+ADTVIFYEQDWNPQVDK
Sbjct: 419 FAAIRSFSSNSVGGS--SQTTRNDAFVFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDK 476
Query: 445 QALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAV 504
QALQRAHRIGQ+NHVLSINLVT TVEEVIMRRAERKL+LS VVG+D +D++ ++
Sbjct: 477 QALQRAHRIGQINHVLSINLVTSQTVEEVIMRRAERKLQLSQKVVGEDYIDQDAEDIAMN 536
Query: 505 ETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNP 564
ET DLRSIIFGLH+FD ++NE+S + +S +++M EKVIA+RH+++S K +F VNP
Sbjct: 537 ETSDLRSIIFGLHVFDQDQVDNEKSGEFEVSNVSAMAEKVIALRHKKLSNKDDTRFLVNP 596
Query: 565 VALLEESDLLMHESFASATSY----PDLDEASYRSWVEKFKEASESSSNTIAESGRRRSP 620
+F++ T+ P LDE SYRSW+EKFKEA+ ++ R+
Sbjct: 597 T------------TFSNGTTSLNFDPGLDEVSYRSWIEKFKEATPGANQIKELEDRKTLS 644
Query: 621 EDKQRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
DK KL+AA++KAEEKKL+KWEA GY SLSV+ P+ GD++SD+GSV FV
Sbjct: 645 RDKSLKLQAAKKKAEEKKLSKWEALGYHSLSVEDPILPNDGDLISDAGSVYFV 697
>gi|449518196|ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Cucumis sativus]
Length = 867
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/713 (61%), Positives = 521/713 (73%), Gaps = 57/713 (7%)
Query: 1 MKYKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL 60
M Y+ RL+ AAK+I +D + + +FGVTA LKP+Q++G+ WLIRRY LGVNV+L
Sbjct: 1 MNYERRLKAAAKLILLHDSGSDNSSESSPDFGVTATLKPYQIDGVQWLIRRYHLGVNVIL 60
Query: 61 GDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGE 120
GDEMGLGKTLQAISFLSYLK Q+SP PFLVLCPLSVTDGWVSE+ KF P L+VL+YVG+
Sbjct: 61 GDEMGLGKTLQAISFLSYLKVHQISPTPFLVLCPLSVTDGWVSEIVKFAPCLKVLQYVGD 120
Query: 121 REQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQ 180
+E RRN RR M EH EQ + PFD+LLTTYD+ LMDQ FLSQIPW Y +IDEAQ
Sbjct: 121 KETRRNARRRMCEHATEQPVSDAL--FPFDILLTTYDIALMDQDFLSQIPWQYAVIDEAQ 178
Query: 181 RLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFK 240
RLKNPSSVLYNVL E FL+PRRLLMTGTPIQNNLSELWAL+HFCMPSVFGTL+QF+S FK
Sbjct: 179 RLKNPSSVLYNVLLERFLIPRRLLMTGTPIQNNLSELWALLHFCMPSVFGTLDQFISIFK 238
Query: 241 DAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------L 294
D+ + + E F SLK +LS F+LRRTK KL E G L+LPPLTE TV L
Sbjct: 239 DSGDLTLGHGKMNGHEHFKSLKYVLSVFLLRRTKAKLSESGVLLLPPLTETTVMVPLVNL 298
Query: 295 QKKVYASILRKELPKLLALSSRTANHQSLQNT---------------------------- 326
Q+KVY S+LRKELPKLLA+S+ ++NHQSLQN
Sbjct: 299 QRKVYMSLLRKELPKLLAVSAGSSNHQSLQNIVIQLRKACSHPYLFPGIEPEPYEEGEHL 358
Query: 327 --ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEER 384
ASGKLVVLD LL+KL+ S HRVLLFAQMT TLDILQDFLELR +SYERLDGSIRAEER
Sbjct: 359 VQASGKLVVLDQLLQKLHESQHRVLLFAQMTHTLDILQDFLELRNFSYERLDGSIRAEER 418
Query: 385 FAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 444
FAAIR FS S S + F F+ISTRAGGVGLNLV+ADTVIFYEQDWNPQVDK
Sbjct: 419 FAAIRSFSSNSVGG---SSQTTRNCFCFLISTRAGGVGLNLVSADTVIFYEQDWNPQVDK 475
Query: 445 QALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAV 504
QALQRAHRIGQ+NHVLSINLVT TVEEVIMRRAERKL+LS VVG+D +D++ ++
Sbjct: 476 QALQRAHRIGQINHVLSINLVTSQTVEEVIMRRAERKLQLSQKVVGEDYIDQDAEDIAMN 535
Query: 505 ETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNP 564
ET DLRSIIFGLH+FD ++NE+S + +S +++M EKVIA+RH+++S K +F VNP
Sbjct: 536 ETSDLRSIIFGLHVFDQDQVDNEKSGEFEVSNVSAMAEKVIALRHKKLSNKDDTRFLVNP 595
Query: 565 VALLEESDLLMHESFASATSY----PDLDEASYRSWVEKFKEASESSSNTIAESGRRRSP 620
+F++ T+ P LDE SYRSW+EKFKEA+ ++ R+
Sbjct: 596 T------------TFSNGTTSLNFDPGLDEVSYRSWIEKFKEATPGANQIKELEDRKTLS 643
Query: 621 EDKQRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
DK KL+AA++KAEEKKL+KWEA GY SLSV+ P+ GD++SD+GSV FV
Sbjct: 644 RDKSLKLQAAKKKAEEKKLSKWEALGYHSLSVEDPILPNDGDLISDAGSVYFV 696
>gi|45357056|gb|AAS58484.1| SNF2P [Triticum monococcum]
Length = 882
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/709 (59%), Positives = 510/709 (71%), Gaps = 44/709 (6%)
Query: 3 YKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
Y+ RL AA ++ D + + +A+ GVTA+LKPHQ++G+ WLIRRY LGVNVLLGD
Sbjct: 6 YERRLLAAADLVLSADGKSQLPRLSSADLGVTADLKPHQLDGVDWLIRRYHLGVNVLLGD 65
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKTLQAIS LSYLK ++PGPFLVLCPLSVTDGW+SE KF P L+V++YVG++
Sbjct: 66 EMGLGKTLQAISLLSYLKIKSIAPGPFLVLCPLSVTDGWLSEFGKFCPTLKVIQYVGDKP 125
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRL 182
RR IRRT++E V++ S LPFDV+LT+YD+ LMDQ FLSQ+PW Y +IDEAQRL
Sbjct: 126 HRRQIRRTIHEDVQKSSHSDE---LPFDVMLTSYDIALMDQDFLSQVPWLYVVIDEAQRL 182
Query: 183 KNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDA 242
KNPSSVLYNVL E F+MPRRLL+TGTP+QNNLSELWALMHFCMPSVFG L++FLSTFK+A
Sbjct: 183 KNPSSVLYNVLEERFMMPRRLLLTGTPVQNNLSELWALMHFCMPSVFGPLDEFLSTFKEA 242
Query: 243 VHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQK 296
+ S + K QF LK IL AFMLRRTK L+E G L LPPLTE+TV LQK
Sbjct: 243 GNLLSGSEANKANRQFKILKHILRAFMLRRTKALLIESGILELPPLTELTVMVPLAPLQK 302
Query: 297 KVYASILRKELPKLLALSSRTANHQSLQNT------------------------------ 326
K+Y S+LRKEL LL+ + ++ HQSLQN
Sbjct: 303 KIYLSVLRKELQTLLSFTGGSSRHQSLQNIVVQLRKACSHPYLFSGIEPEPYEEGEHLVQ 362
Query: 327 ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFA 386
ASGKL+VLDL+L+KL+ GHRV+LFAQMTQTLDILQDFLELR Y+YERLDGS+RAEERFA
Sbjct: 363 ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFA 422
Query: 387 AIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA 446
AIR+FS Q + ++ + AFVFMISTRAGGVGLNL+ ADTVIFYEQDWNPQ DKQA
Sbjct: 423 AIRNFSSQPTKGVVRDDSNPSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQA 482
Query: 447 LQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGD-DVVDREVKERTAVE 505
LQR HRIGQ+NHVLSINLV++ T+EEVIMRRAERKL+LSHN+ GD D D + + E
Sbjct: 483 LQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDKDATDGKGND-LGNE 541
Query: 506 TDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPV 565
+D+ SIIFGLH FDP E ++ L L SM E VI MR + S K R FE+NP
Sbjct: 542 ANDMCSIIFGLHQFDPADTAAETINEETLEKLKSMSENVIKMRTHEPSEKDDRAFEINP- 600
Query: 566 ALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRR-SPEDKQ 624
L E S L++ + S + P +DEA+Y SWVEKFKEAS S + E R+R +PEDK
Sbjct: 601 DLTEGSGLVITRACDSISIDPGVDEAAYLSWVEKFKEASHSIEDVPVELERQRPAPEDKL 660
Query: 625 RKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
K EA ++KAEEK+LAKW+ GYQ+L VK P P + +SDSGSVQ V
Sbjct: 661 LKREANKKKAEEKRLAKWKDLGYQTLGVKVPDNIPNQN-ISDSGSVQLV 708
>gi|215254414|gb|ACJ64199.1| SNF2P [Triticum turgidum]
Length = 882
Score = 810 bits (2091), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/709 (59%), Positives = 510/709 (71%), Gaps = 44/709 (6%)
Query: 3 YKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
Y+ RL AA ++ D + + +A+ GVTA+LKPHQ++G+ WLIRRY LGVNVLLGD
Sbjct: 6 YERRLLAAADLVLSADGKAQIPRLSSADLGVTADLKPHQLDGVDWLIRRYHLGVNVLLGD 65
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKTLQAIS LSYLK ++PGPFLVLCPLSVTDGW+SE KF P L+V++YVG++
Sbjct: 66 EMGLGKTLQAISLLSYLKIKSIAPGPFLVLCPLSVTDGWLSEFGKFCPTLKVIQYVGDKA 125
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRL 182
RR IRRT++E V++ S + LPFDV+LT+YD+ LMDQ FLSQIPW Y +IDEAQRL
Sbjct: 126 HRRQIRRTVHEDVQKSSHSNE---LPFDVMLTSYDIALMDQDFLSQIPWLYVVIDEAQRL 182
Query: 183 KNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDA 242
KNPSSVLYNVL E F+MPRRLL+TGTP+QNNLSELWALMHFCMPSVFG L++FLSTFK+A
Sbjct: 183 KNPSSVLYNVLEERFMMPRRLLLTGTPVQNNLSELWALMHFCMPSVFGPLDEFLSTFKEA 242
Query: 243 VHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQK 296
+ S + K QF LK IL AFMLRRTK L+E G L LPPLTE+TV LQK
Sbjct: 243 GNLLSGSEANKANRQFKILKHILRAFMLRRTKALLIESGILELPPLTELTVMVPLAPLQK 302
Query: 297 KVYASILRKELPKLLALSSRTANHQSLQNT------------------------------ 326
K+Y S+LRKEL LL+ + ++ HQSLQN
Sbjct: 303 KIYLSVLRKELQTLLSFTGGSSRHQSLQNIVVQLQKACSHPYLFSGIEPEPYEEGEHLVQ 362
Query: 327 ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFA 386
ASGKL+VLDL+L+KL+ GHRV+LFAQMTQTLDILQDFLELR Y+YERLDGS+RAEERFA
Sbjct: 363 ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFA 422
Query: 387 AIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA 446
AIR+FS Q + ++ + AFVFM+STRAGGVGLNL+ ADTVIFYEQDWNPQ DKQA
Sbjct: 423 AIRNFSSQPTKGGVRDDSNPSGAFVFMVSTRAGGVGLNLIGADTVIFYEQDWNPQADKQA 482
Query: 447 LQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGD-DVVDREVKERTAVE 505
LQR HRIGQ+NHVLSINLV++ T+EEVIMRRAERKL+LSHN+ D D D + K+ E
Sbjct: 483 LQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFEDKDATDGKGKD-LGNE 541
Query: 506 TDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPV 565
+D+RSIIFGLH FDP E ++ L L SM E VI MR + S K R FE+NP
Sbjct: 542 ANDMRSIIFGLHQFDPADTAAETINEETLEKLKSMSENVIKMRTHEPSEKDDRAFEINP- 600
Query: 566 ALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRR-SPEDKQ 624
L E S ++ + S + P +DEA+Y SWVEKFKEAS S + E R+R +PEDK
Sbjct: 601 DLTEGSGAVITRACDSISIDPGVDEAAYLSWVEKFKEASHSIEDVPVELERQRPAPEDKL 660
Query: 625 RKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
K EA ++KAEEK+LAKW+ GYQ+L VK P P + SDSGSVQ V
Sbjct: 661 LKREANKKKAEEKRLAKWKDLGYQTLGVKVPDNIPNQN-TSDSGSVQLV 708
>gi|45357049|gb|AAS58478.1| SNF2P [Hordeum vulgare subsp. vulgare]
Length = 882
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/709 (59%), Positives = 512/709 (72%), Gaps = 44/709 (6%)
Query: 3 YKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
Y+ RL AA ++ D + + +A+ GVTA+LKPHQ++G+ WLIRRY LGVNVLLGD
Sbjct: 6 YERRLLAAADLVLSADGKSQLPRLSSADLGVTADLKPHQLDGVHWLIRRYHLGVNVLLGD 65
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKTLQAIS LSYLK ++PGPFLVLCPLSVTDGW+SE KF P L+V++YVG++
Sbjct: 66 EMGLGKTLQAISLLSYLKIKSIAPGPFLVLCPLSVTDGWLSEFGKFCPTLKVIQYVGDKA 125
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRL 182
RR+IRRTM++ V++ S + LPFDV+LT+YD+ LMDQ FLSQIPW Y +IDEAQRL
Sbjct: 126 HRRHIRRTMHDDVQKSSHSNE---LPFDVMLTSYDIALMDQDFLSQIPWLYVVIDEAQRL 182
Query: 183 KNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDA 242
KNPSSVLYNVL E F+MPRRLL+TGTP+QNNLSELWALMHFCMPSVFG L++FLSTFK+A
Sbjct: 183 KNPSSVLYNVLEERFMMPRRLLLTGTPVQNNLSELWALMHFCMPSVFGPLDEFLSTFKEA 242
Query: 243 VHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQK 296
+ S + + QF LK IL AFMLRRTK L+E G L LPPLTE+TV LQK
Sbjct: 243 GNLLSGSEANQANRQFKILKHILRAFMLRRTKALLIESGILELPPLTELTVMVPLAPLQK 302
Query: 297 KVYASILRKELPKLLALSSRTANHQSLQNT------------------------------ 326
K+Y S+LRKEL LL+ + ++ HQSLQN
Sbjct: 303 KIYLSVLRKELQTLLSFTGGSSRHQSLQNIVVQLRKACSHPYLFSGIEPEPYEEGEHLVQ 362
Query: 327 ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFA 386
ASGKL+VLDL+L+KL+ GHRV+LFAQMTQTLDILQDFLELR Y+YERLDGS+RAEERFA
Sbjct: 363 ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFA 422
Query: 387 AIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA 446
AIR+FS Q + + + AF+FMISTRAGGVGLNL+ ADTVIFYEQDWNPQ DKQA
Sbjct: 423 AIRNFSSQPTKGVVRDDNNPSGAFIFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQA 482
Query: 447 LQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGD-DVVDREVKERTAVE 505
LQR HRIGQ+NHVLSINLV++ T+EEVIMRRAERKL+LSHN+ GD D D + K+ E
Sbjct: 483 LQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDKDATDGKGKD-FGNE 541
Query: 506 TDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPV 565
+D+RSII GLH FDP E ++ L+ L SM E VI MR + S K R FE+NP
Sbjct: 542 ANDMRSIILGLHQFDPADTAAETINEETLAKLKSMSENVIKMRTHEPSEKDDRAFEINP- 600
Query: 566 ALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRR-SPEDKQ 624
L + S ++ + S + P +DEA+Y SWVE+FKEAS S + E R+R +PEDK
Sbjct: 601 DLTDGSGAMITRACDSISIDPGVDEAAYLSWVERFKEASHSIEDVPVELERQRPAPEDKL 660
Query: 625 RKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
K EA ++KAEEK+LAKW+ GYQ+L VK P P + +SDSGSVQ V
Sbjct: 661 LKREANKKKAEEKRLAKWKDLGYQTLGVKVPDNIPNQN-ISDSGSVQLV 708
>gi|148910874|gb|ABR18490.1| SNF2P [Triticum turgidum]
Length = 878
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/709 (59%), Positives = 509/709 (71%), Gaps = 44/709 (6%)
Query: 3 YKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
Y+ RL AA ++ + + + + GVTA+LKPHQ++G+ WLIRRY LGVNVLLGD
Sbjct: 6 YERRLLAAADLVLSAYGKSQIPRLSSTDLGVTADLKPHQLDGVDWLIRRYHLGVNVLLGD 65
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKTLQAIS LSYLK ++PGPFLVLCPLSVTDGW+SE KF P L+V++YVG++
Sbjct: 66 EMGLGKTLQAISLLSYLKIKSIAPGPFLVLCPLSVTDGWLSEFGKFCPTLKVIQYVGDKP 125
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRL 182
RR IRRT++E V++ S LPFDV+LT+YD+ LMDQ FLSQ+PW Y +IDEAQRL
Sbjct: 126 HRRQIRRTIHEDVQKSSHSDE---LPFDVMLTSYDIALMDQDFLSQVPWLYVVIDEAQRL 182
Query: 183 KNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDA 242
KNPSSVLYNVL E F+MPRRLL+TGTP+QNNLSELWALMHFCMPSVFG L++FLSTFK+A
Sbjct: 183 KNPSSVLYNVLEERFMMPRRLLLTGTPVQNNLSELWALMHFCMPSVFGPLDEFLSTFKEA 242
Query: 243 VHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQK 296
+ S + K QF LK IL AFMLRRTK L+E G L LPPLTE+TV LQK
Sbjct: 243 GNLLSGSEANKANRQFKILKHILRAFMLRRTKALLIESGILELPPLTELTVMVPLAPLQK 302
Query: 297 KVYASILRKELPKLLALSSRTANHQSLQNT------------------------------ 326
K+Y S+LRKEL LL+ + ++ HQSLQN
Sbjct: 303 KIYLSVLRKELQTLLSFTGGSSRHQSLQNIVVQLRKACSHPYLFSGIEPEPYEEGEHLVQ 362
Query: 327 ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFA 386
ASGKL+VLDL+L+KL+ GHRV+LFAQMTQTLDILQDFLELR Y+YERLDGS+RAEERFA
Sbjct: 363 ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFA 422
Query: 387 AIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA 446
AIR+FS Q + ++ + AFVFMISTRAGGVGLNL+ ADTVIFYEQDWNPQ DKQA
Sbjct: 423 AIRNFSSQPTKGVVRDDSNPSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQA 482
Query: 447 LQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGD-DVVDREVKERTAVE 505
LQR HRIGQ+NHVLSINLV++ T+EEVIMRRAERKL+LSHN+ GD D D + + E
Sbjct: 483 LQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDKDATDGKGND-LGNE 541
Query: 506 TDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPV 565
+D+RSIIFGLH FDP E ++ L L SM E VI MR + S K R FE+NP
Sbjct: 542 ANDMRSIIFGLHQFDPADTAAETINEETLEKLKSMSENVIKMRTHEPSEKDDRAFEINP- 600
Query: 566 ALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRR-SPEDKQ 624
L E S L++ + S + P +DEA+Y SWVEKFKEAS S + E R+R +PEDK
Sbjct: 601 DLTEGSGLVITRACDSISIDPGVDEAAYLSWVEKFKEASHSIEDVPVELERQRPAPEDKL 660
Query: 625 RKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
K EA ++KAEEK+LAKW+ GYQ+L VK P P + +S+SGSVQ V
Sbjct: 661 LKREANKKKAEEKRLAKWKDLGYQTLGVKVPDNIPNQN-ISNSGSVQLV 708
>gi|23193481|gb|AAN14535.1|AF459085_1 SNF2P [Hordeum vulgare]
Length = 882
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/709 (58%), Positives = 512/709 (72%), Gaps = 44/709 (6%)
Query: 3 YKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
Y+ RL AA ++ D + + +A+ GVTA+LKPHQ++G+ WLIRRY LGVNVLLGD
Sbjct: 6 YERRLLAAADLVLSADGKSQLPRLSSADLGVTADLKPHQLDGVHWLIRRYHLGVNVLLGD 65
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKTLQAIS LSYLK ++P PFLVLCPLSVTDGW+SE KF P L+V++YVG+
Sbjct: 66 EMGLGKTLQAISLLSYLKIKSIAPRPFLVLCPLSVTDGWLSEFGKFCPTLKVIQYVGDTA 125
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRL 182
RR+IRRTM++ V++ S ++ LPFDV+LT+YD+ LMDQ FLSQIPW Y +IDEAQRL
Sbjct: 126 HRRHIRRTMHDDVQKSSHSND---LPFDVMLTSYDIALMDQDFLSQIPWLYVVIDEAQRL 182
Query: 183 KNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDA 242
KNPSSVLYNVL E F+MPRRLL+TGTP+QNNLSELWALMHFCMPSVFG L++FLSTFK+A
Sbjct: 183 KNPSSVLYNVLEERFMMPRRLLLTGTPVQNNLSELWALMHFCMPSVFGPLDEFLSTFKEA 242
Query: 243 VHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQK 296
+ S + + QF LK IL AFMLRRTK L+E G L LPPLTE+TV LQK
Sbjct: 243 GNLLSGSEANQANRQFKILKHILRAFMLRRTKALLIESGILELPPLTELTVMVPLAPLQK 302
Query: 297 KVYASILRKELPKLLALSSRTANHQSLQNT------------------------------ 326
K+Y S+LRKEL LL+ + ++ HQSLQN
Sbjct: 303 KIYLSVLRKELQTLLSFTGGSSRHQSLQNIVVQLRKACSHPYLFSGIEPEPYEEGEHLVQ 362
Query: 327 ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFA 386
ASGKL+VLDL+L+KL+ GHRV+LFAQMTQTLDILQDFLELR Y+YERLDGS+RAEERFA
Sbjct: 363 ASGKLIVLDLVLEKLHRLGHRVVLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFA 422
Query: 387 AIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA 446
AIR+FS Q+ + + + AFVFMISTRAGGVGLNL+ ADTVIFYEQDWNPQ DKQA
Sbjct: 423 AIRNFSSQATKGVVRDDNNPSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQA 482
Query: 447 LQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGD-DVVDREVKERTAVE 505
LQR HRIGQ+NHVLSINLV++ T+EEVIMRRAERKL+LSHN+ GD D D + K+ E
Sbjct: 483 LQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDKDATDGKGKD-FGNE 541
Query: 506 TDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPV 565
+D+RSII GLH FDP E ++ L+ L SM E VI MR + + K R FE+NP
Sbjct: 542 ANDMRSIILGLHQFDPADTAAETINEETLAKLKSMSENVIKMRTHEPAEKDDRAFEINP- 600
Query: 566 ALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRR-SPEDKQ 624
L + S ++ + S + P +DEA+Y SWVE+FKEAS S + E R+R +PEDK
Sbjct: 601 DLTDGSGAMITRACDSISIDPGVDEAAYLSWVERFKEASHSIEDVPVELERQRPAPEDKL 660
Query: 625 RKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
K EA ++KAEEK+LA+W+ GYQ+L VK P P + +SDSGSVQ V
Sbjct: 661 LKREANKKKAEEKRLARWKDLGYQTLGVKVPDNIPNQN-ISDSGSVQLV 708
>gi|23193483|gb|AAN14536.1|AF459086_1 SNF2P [Oryza sativa Japonica Group]
gi|23193485|gb|AAN14537.1| SNF2P [Oryza sativa Japonica Group]
Length = 894
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/702 (59%), Positives = 504/702 (71%), Gaps = 55/702 (7%)
Query: 22 GQTPVDAAEFGV--TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYL 79
GQ P AA+ GV TAELKPHQV+G++WLIRRY LGVNVLLGDEMGLGKTLQAIS LSYL
Sbjct: 25 GQPPHAAAQLGVGVTAELKPHQVDGVAWLIRRYQLGVNVLLGDEMGLGKTLQAISLLSYL 84
Query: 80 KFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQS 139
K +SPGPFLVLCPLSVTDGW+SE KF P L V++YVG++ RR++RR M++ V++ S
Sbjct: 85 KIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKLHRRDLRRMMFQDVQKSS 144
Query: 140 QMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLM 199
S+ + LPFDV++TTYD+ LMDQ FLSQIPW Y +IDEAQRLKNPSSVLYNVL + F+M
Sbjct: 145 SSSHSTELPFDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIM 204
Query: 200 PRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT 259
PRRLL+TGTPIQNNLSELWALMHFCMPS+FGTL+QFLSTFK + S + + K +QF
Sbjct: 205 PRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLSTFKQSGDSLTGGETNKTDKQFK 264
Query: 260 SLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLAL 313
LK +L AFMLRRTK L++ G L LP LTE+TV LQKK+Y S+LRKEL LL
Sbjct: 265 ILKHVLRAFMLRRTKALLIQSGILALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLLTF 324
Query: 314 SSRTANHQSLQNT------------------------------ASGKLVVLDLLLKKLYN 343
+ + HQSLQN ASGKLV+LDL+LKKL+
Sbjct: 325 TGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPEPYVEGEHLVQASGKLVMLDLILKKLHE 384
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ--SAIERLY 401
GHRVLLFAQMTQTLDILQDFLELR+Y+YERLDGS+RAEERFAAI+ FS Q + R
Sbjct: 385 VGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDD 444
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
+++G AFVFMISTRAGGVGLNL+ ADTVIFYEQDWNPQ DKQALQRAHRIGQ+N+VLS
Sbjct: 445 NQSG---AFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNNVLS 501
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDP 521
INLV++ T+EEVIMRRAERKL+LSH+V+G++ + E D+RSIIFGLHLFD
Sbjct: 502 INLVSQRTIEEVIMRRAERKLKLSHSVIGEEDATYGKGKYVENEASDMRSIIFGLHLFDT 561
Query: 522 KAINNEESDDLRLS---------GLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESD 572
E +D S L SM EKV+ MR + S K R FE+NP + + S
Sbjct: 562 SDTTAETMNDDTASETIKEETMLKLKSMSEKVVLMRSHEPSEKDERAFEINP-NMTDNSG 620
Query: 573 LLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRR-SPEDKQRKLEAAR 631
++ S PD +EA+Y SW+EKFKE+S S NT AE R+R +PE+K K EA +
Sbjct: 621 AVVTRVSDSVNVDPDFNEAAYLSWLEKFKESSHSKENTRAELERQRIAPEEKFLKREAIK 680
Query: 632 RKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
+K EEK+LAKWE+ GYQ+L +K P P + + DSGSVQ V
Sbjct: 681 KKVEEKRLAKWESLGYQTLKIKDPDILPNQN-IPDSGSVQLV 721
>gi|357121056|ref|XP_003562238.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Brachypodium distachyon]
Length = 893
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/700 (58%), Positives = 498/700 (71%), Gaps = 49/700 (7%)
Query: 21 DGQTPV---DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL-------GDEMGLGKTL 70
D +P+ +A+ GVT +LKPHQ++G+ WLIRRY LGVNVLL +MGLGKTL
Sbjct: 21 DHHSPLPRRSSADLGVTVQLKPHQLDGVHWLIRRYHLGVNVLLVTAHVSDHGQMGLGKTL 80
Query: 71 QAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRT 130
QAIS LSYLK ++PGPFLVLCPLSVT GW SE A+F P L+V++Y G++ RR++RR
Sbjct: 81 QAISLLSYLKIQSITPGPFLVLCPLSVTHGWSSEFARFCPTLKVIQYAGDKAHRRDLRRI 140
Query: 131 MYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLY 190
M+E V++ S SN + LPFDV+LT+YD+ LMDQ FLSQIPW Y +IDEAQRLKNPSS+LY
Sbjct: 141 MHEGVQKSSASSNSNELPFDVMLTSYDIALMDQDFLSQIPWLYVVIDEAQRLKNPSSLLY 200
Query: 191 NVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPK 250
NVL+EHF+MPRRLL+TGTPIQNNLSELWALMHFCMPSVFG+L++FLSTFK+A + + +
Sbjct: 201 NVLKEHFIMPRRLLLTGTPIQNNLSELWALMHFCMPSVFGSLDEFLSTFKEAGNLLAGSE 260
Query: 251 RGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILR 304
K F ++K IL AFMLRRTK L + G L LPPLTE+TV LQKK+Y S+LR
Sbjct: 261 ANKANGHFKNIKHILRAFMLRRTKALLTQSGILELPPLTELTVMVPMAPLQKKLYLSVLR 320
Query: 305 KELPKLLALSSRTANHQSLQNT------------------------------ASGKLVVL 334
KEL LL+ S ++ HQSLQN ASGKL+VL
Sbjct: 321 KELQTLLSFSGGSSRHQSLQNIVIQLRKACSHPYLFSGIEPEPYEEGEHLVQASGKLIVL 380
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
DL+LKKL+ GHRVLLFAQMT TLDILQDFLELR Y+YERLDGS+RAEERFAAIR FS Q
Sbjct: 381 DLILKKLHRLGHRVLLFAQMTHTLDILQDFLELRNYTYERLDGSVRAEERFAAIRKFSSQ 440
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ + AFVFMISTRAGGVGLNL+ ADTVIFYEQDWNPQ DKQALQRAHRIG
Sbjct: 441 PTKGVARDDDNPSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIG 500
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIF 514
Q+NHVLSINLV++ T+EEVIMRRAERKL+LSHN+ GD+ E E D+RSIIF
Sbjct: 501 QLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDEDTTDGKGEDLRNEASDMRSIIF 560
Query: 515 GLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLL 574
GLH FDP E ++ L+ L SM E VI MR + S K R FE+NP L + S +
Sbjct: 561 GLHQFDPADTATETMNEETLAKLESMSENVIKMRAHEPSEKDDRAFEINP-NLTDSSAAV 619
Query: 575 MHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRRS-PEDKQRKLEAARRK 633
+ + S P ++EA+Y SWV KFKEAS S N E R+RS PE+K K EA ++K
Sbjct: 620 ITRTCDSINIDPGINEAAYLSWVGKFKEASHSIENVTVEQERQRSAPEEKVLKREANKKK 679
Query: 634 AEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
AEEK+LAKW+ +GY++L+VK P P + +SDSGSVQ V
Sbjct: 680 AEEKRLAKWKTSGYETLTVKDPDDIPNQN-ISDSGSVQLV 718
>gi|356498186|ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine
max]
Length = 1482
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/648 (63%), Positives = 485/648 (74%), Gaps = 39/648 (6%)
Query: 64 MGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQ 123
MGLGKTLQAISFLSYLK ++S GPFLV+CPLSVTDGWVSE+ KFTPKL+V +YVG++E
Sbjct: 668 MGLGKTLQAISFLSYLKVCRLSLGPFLVICPLSVTDGWVSEIVKFTPKLKVFKYVGDKEC 727
Query: 124 RRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRL 182
RRN+R ++E+V + L PFDVLLT+YD+ LMDQ FLSQI W Y IIDEAQRL
Sbjct: 728 RRNLRMKIHEYVTGHCGGTFWQVLLPFDVLLTSYDIALMDQDFLSQISWQYAIIDEAQRL 787
Query: 183 KNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDA 242
KNPSSVL+NVL++ ++MPRRLLMTGTPIQNNLSELWALM+FCMPSVFGT +QFLS FKD
Sbjct: 788 KNPSSVLFNVLKDCYIMPRRLLMTGTPIQNNLSELWALMYFCMPSVFGTPDQFLSMFKDI 847
Query: 243 VHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQK 296
S K+KE+ L+ +L AFMLRRTK KL+ECG+L+LPPLT TV LQK
Sbjct: 848 SDLSPVHDTPKVKERLKILRSVLGAFMLRRTKSKLIECGNLVLPPLTVTTVLVPLVILQK 907
Query: 297 KVYASILRKELPKLLALSSRTANHQSLQNT------------------------------ 326
KVY SILRKEL KLLALS T+NH+SLQN
Sbjct: 908 KVYMSILRKELHKLLALSFGTSNHESLQNIVIQLRKACSHPYLFPGIESEPYEEGEHLVQ 967
Query: 327 ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFA 386
ASGKL++LD LL+KL+ SGHRVLLFAQMT TLDILQDFLELRKYSYERLDGSIRAEERFA
Sbjct: 968 ASGKLLILDQLLQKLHYSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSIRAEERFA 1027
Query: 387 AIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA 446
AIR FS SA L SEA N+AFVF+ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA
Sbjct: 1028 AIRSFSSSSANMGLNSEADQNEAFVFIISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA 1087
Query: 447 LQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVET 506
LQRAHRIGQMNHVL INLVTE TVEEVIMRRAERKL LS NV+GD+++ + KE + V +
Sbjct: 1088 LQRAHRIGQMNHVLCINLVTERTVEEVIMRRAERKLLLSLNVIGDNILKDDNKEPSEVGS 1147
Query: 507 DDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVA 566
DL+SIIFGLH+FDP IN+ ++ + + +M ++V+AMR EQ+ RKFEVNP
Sbjct: 1148 GDLKSIIFGLHMFDPTEINDGNHRNMNIPEICAMADRVLAMRDEQILDNDERKFEVNPTN 1207
Query: 567 LLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAE-SGRRRSPEDKQR 625
+L + D + AS + LDEASY SWV+KF+E S+SS ++I + RR E+K
Sbjct: 1208 IL-KGDAVKERDSASLSCDLGLDEASYLSWVKKFEEVSKSSCDSITDLRSRRNVDEEKSL 1266
Query: 626 KLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
K+E+AR+KAEEKKLA+WEA GYQSL+VK + G D+ S SGSV FV
Sbjct: 1267 KIESARKKAEEKKLARWEALGYQSLNVKDAISPTGNDIASASGSVHFV 1314
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/63 (60%), Positives = 47/63 (74%)
Query: 1 MKYKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL 60
+ Y++RLQV A++I D D R G P+ E G+ LKPHQVEG+SWLIRRY LGVNV+L
Sbjct: 3 LSYEQRLQVVARLILDEDSRPGDAPLYQEELGLRVTLKPHQVEGVSWLIRRYKLGVNVVL 62
Query: 61 GDE 63
GDE
Sbjct: 63 GDE 65
>gi|222624012|gb|EEE58144.1| hypothetical protein OsJ_09059 [Oryza sativa Japonica Group]
Length = 822
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/702 (57%), Positives = 489/702 (69%), Gaps = 69/702 (9%)
Query: 22 GQTPVDAAEFGV--TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYL 79
GQ P AA+ GV TAELKPHQV+G++WLIRRY LGVNVLL +MGLGKTLQAIS LSYL
Sbjct: 25 GQPPHAAAQLGVGVTAELKPHQVDGVAWLIRRYQLGVNVLLDGQMGLGKTLQAISLLSYL 84
Query: 80 KFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQS 139
K +SPGPFLVLCPLSVTDGW+SE KF P L V++YVG++ RR++RR M++ V++ S
Sbjct: 85 KIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKLHRRDLRRMMFQDVQKSS 144
Query: 140 QMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLM 199
S+ + LPFDV++TTYD+ LMDQ FLSQIPW Y +IDEAQRLKNPSSVLYNVL + F+M
Sbjct: 145 SSSHSTELPFDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRFIM 204
Query: 200 PRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT 259
PRRLL+TGTPIQNNLSELWALMHFCMPS+FGTL+QFLSTFK + S + + K +QF
Sbjct: 205 PRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLSTFKQSGDSLTGGETNKTDKQFK 264
Query: 260 SLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLAL 313
LK +L AFMLRRTK L++ G L LP LTE+TV LQKK+Y S+LRKEL LL
Sbjct: 265 ILKHVLRAFMLRRTKALLIQSGILALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLLTF 324
Query: 314 SSRTANHQSLQNT------------------------------ASGKLVVLDLLLKKLYN 343
+ + HQSLQN ASGKLV+LDL+LKKL+
Sbjct: 325 TGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPEPYVEGEHLVQASGKLVMLDLILKKLHE 384
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ--SAIERLY 401
GHRVLLFAQMTQTLDILQDFLELR+Y+YERLDGS+RAEERFAAI+ FS Q + R
Sbjct: 385 VGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVRDD 444
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
+++G AFVFMISTRAGGVGLNL+ ADTVIFYEQDWNPQ DKQALQRAHRIGQ+N+
Sbjct: 445 NQSG---AFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNN--- 498
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDP 521
VIMRRAERKL+LSH+V+G++ + E D+RSIIFGLHLFD
Sbjct: 499 -----------VIMRRAERKLKLSHSVIGEEDATYGKGKYVENEASDMRSIIFGLHLFDT 547
Query: 522 KAINNEESDDLRLS---------GLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESD 572
E +D S L SM EKV+ MR + S K R FE+NP + + S
Sbjct: 548 SDTTAETMNDDTASETIKEETMLKLKSMSEKVVLMRSHEPSEKDERAFEINP-NMTDNSG 606
Query: 573 LLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRR-SPEDKQRKLEAAR 631
++ S PD +EA+Y SW+EKFKE+S S NT AE R+R +PE+K K EA +
Sbjct: 607 AVVTRVSDSVNVDPDFNEAAYLSWLEKFKESSHSKENTRAELERQRIAPEEKFLKREAIK 666
Query: 632 RKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
+K EEK+LAKWE+ GYQ+L +K P P + + DSGSVQ V
Sbjct: 667 KKVEEKRLAKWESLGYQTLKIKDPDILPNQN-IPDSGSVQLV 707
>gi|413957252|gb|AFW89901.1| hypothetical protein ZEAMMB73_126422, partial [Zea mays]
Length = 818
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/656 (58%), Positives = 476/656 (72%), Gaps = 49/656 (7%)
Query: 64 MGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQ 123
MGLGKTLQAIS LSYLK +++PGPFLVLCPLSVTDGW+SE +KF P V++YVG +
Sbjct: 1 MGLGKTLQAISLLSYLKIHRIAPGPFLVLCPLSVTDGWLSEFSKFCPSFRVMQYVGGKLH 60
Query: 124 RRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLK 183
RR++RRT+YE V++ S S LPFDVL+TTYD+ LMDQ FLSQIPW Y +IDEAQRLK
Sbjct: 61 RRDLRRTIYEDVQKASTSSRSFELPFDVLMTTYDIALMDQDFLSQIPWHYAVIDEAQRLK 120
Query: 184 NPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAV 243
NPSSVLYNVL + F+MPRRLL+TGTPIQNNLSELWALMHFC+PS+FG L++FLSTFK+A
Sbjct: 121 NPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCLPSIFGKLDEFLSTFKEAG 180
Query: 244 HSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKK 297
S + + K K QF +K +L AFMLRRTK L+E G L LPPLTE+TV LQKK
Sbjct: 181 ESLTGDEANKAKGQFKIIKHVLKAFMLRRTKFLLIESGILALPPLTELTVMVPLTQLQKK 240
Query: 298 VYASILRKELPKLLALSSRTANHQSLQNT------------------------------A 327
+Y S+LRKELP L++ + ++ HQSLQN A
Sbjct: 241 LYMSVLRKELPTLISFARGSSRHQSLQNIVIQLRKVCSHPYLFSGIEPEPYVEGEHLIQA 300
Query: 328 SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAA 387
SGKL+VLDL+LKKL+ GHRVLLFAQMTQTLDILQDFLELR Y+YERLDGS+RAEERFAA
Sbjct: 301 SGKLIVLDLILKKLHECGHRVLLFAQMTQTLDILQDFLELRNYTYERLDGSVRAEERFAA 360
Query: 388 IRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQAL 447
IR+FS QS + L + ++AFVFMISTRAGGVGLNL+ ADTVIFYEQDWNPQ DKQAL
Sbjct: 361 IRNFSSQST-KGLIRDDNRSEAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQAL 419
Query: 448 QRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETD 507
QRAHRIGQ+NHVLSINLV++ T+EEVIMRRA+RKL+LSHN++G++ +E
Sbjct: 420 QRAHRIGQLNHVLSINLVSQRTIEEVIMRRADRKLKLSHNIIGEEDGTDGKGGDPGIEAS 479
Query: 508 DLRSIIFGLHLFDPKAINNEESDD---------LRLSGLNSMVEKVIAMRHEQVSGKAGR 558
D+RSIIFGLHLFDP E D+ +L+ L +M EKV+ MR + S K R
Sbjct: 480 DMRSIIFGLHLFDPADTATETIDEDITAETFSVEKLAKLKTMSEKVVMMRSHESSEKDER 539
Query: 559 KFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRR 618
FE+NP + ++S ++ + S P L+EA+Y SWV+KFKEAS SS + GR+R
Sbjct: 540 AFEINP-NMTDDSGTVIRRASDSIRIDPGLNEAAYLSWVKKFKEASISSEDATVGFGRQR 598
Query: 619 -SPEDKQRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
+PE+K K + ++K EEK+LAKWE+ GYQ+L+VK P + + +SD+GS+QFV
Sbjct: 599 AAPEEKLLKHDVNKQKIEEKRLAKWESLGYQTLAVKEPDITASQN-ISDAGSIQFV 653
>gi|115450111|ref|NP_001048656.1| Os03g0101700 [Oryza sativa Japonica Group]
gi|108705687|gb|ABF93482.1| SNF2P, putative, expressed [Oryza sativa Japonica Group]
gi|113547127|dbj|BAF10570.1| Os03g0101700 [Oryza sativa Japonica Group]
gi|215694686|dbj|BAG89877.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 842
Score = 727 bits (1876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/659 (58%), Positives = 468/659 (71%), Gaps = 53/659 (8%)
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
+MGLGKTLQAIS LSYLK +SPGPFLVLCPLSVTDGW+SE KF P L V++YVG++
Sbjct: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKL 75
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRL 182
RR++RR M++ V++ S S+ + LPFDV++TTYD+ LMDQ FLSQIPW Y +IDEAQRL
Sbjct: 76 HRRDLRRMMFQDVQKSSSSSHSTELPFDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQRL 135
Query: 183 KNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDA 242
KNPSSVLYNVL + F+MPRRLL+TGTPIQNNLSELWALMHFCMPS+FGTL+QFLSTFK +
Sbjct: 136 KNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLSTFKQS 195
Query: 243 VHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQK 296
S + + K +QF LK +L AFMLRRTK L++ G L LP LTE+TV LQK
Sbjct: 196 GDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTELTVMVPLTPLQK 255
Query: 297 KVYASILRKELPKLLALSSRTANHQSLQNT------------------------------ 326
K+Y S+LRKEL LL + + HQSLQN
Sbjct: 256 KLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPEPYVEGEHLVQ 315
Query: 327 ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFA 386
ASGKLV+LDL+LKKL+ GHRVLLFAQMTQTLDILQDFLELR+Y+YERLDGS+RAEERFA
Sbjct: 316 ASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFA 375
Query: 387 AIRHFSVQ--SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 444
AI+ FS Q + R +++G AFVFMISTRAGGVGLNL+ ADTVIFYEQDWNPQ DK
Sbjct: 376 AIKSFSSQPTKGVVRDDNQSG---AFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADK 432
Query: 445 QALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAV 504
QALQRAHRIGQ+N+VLSINLV++ T+EEVIMRRAERKL+LSH+V+G++ +
Sbjct: 433 QALQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEEDATYGKGKYVEN 492
Query: 505 ETDDLRSIIFGLHLFDPKAINNEESDDLRLS---------GLNSMVEKVIAMRHEQVSGK 555
E D+RSIIFGLHLFD E +D S L SM EKV+ MR + S K
Sbjct: 493 EASDMRSIIFGLHLFDTSDTTAETMNDDTASETIKEETMLKLKSMSEKVVLMRSHEPSEK 552
Query: 556 AGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESG 615
R FE+NP + + S ++ S PD +EA+Y SW+EKFKE+S S NT AE
Sbjct: 553 DERAFEINP-NMTDNSGAVVTRVSDSVNVDPDFNEAAYLSWLEKFKESSHSKENTRAELE 611
Query: 616 RRR-SPEDKQRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
R+R +PE+K K EA ++K EEK+LAKWE+ GYQ+L +K P P + + DSGSVQ V
Sbjct: 612 RQRIAPEEKFLKREAIKKKVEEKRLAKWESLGYQTLKIKDPDILPNQN-IPDSGSVQLV 669
>gi|218191902|gb|EEC74329.1| hypothetical protein OsI_09617 [Oryza sativa Indica Group]
Length = 661
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/653 (58%), Positives = 455/653 (69%), Gaps = 70/653 (10%)
Query: 22 GQTPVDAAEFGV--TAELKPHQVEGLSWLIRRYLLGVNVLLGD--EMGLGKTLQAISFLS 77
GQ P AA+ GV TAELKPHQV+G++WLIRRY LGVNVLL D +MGLGKTLQAIS LS
Sbjct: 25 GQPPHAAAQLGVGVTAELKPHQVDGVAWLIRRYQLGVNVLLADHGQMGLGKTLQAISLLS 84
Query: 78 YLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKE 137
YLK +SPGPFLVLCPLSVTDGW+SE KF P L V++YVG++ RR++RR M++ V++
Sbjct: 85 YLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKLHRRDLRRMMFQDVQK 144
Query: 138 QSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHF 197
S S+ + LPFDV++TTYD+ LMDQ FLSQIPW Y +IDEAQRLKNPSSVLYNVL + F
Sbjct: 145 SSSSSHSTELPFDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQRLKNPSSVLYNVLEQRF 204
Query: 198 LMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ 257
+MPRRLL+TGTPIQNNLSELWALMHFCMPS+FGTL+QFLSTFK + S + + K +Q
Sbjct: 205 IMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLSTFKQSGDSLTGGETNKTDKQ 264
Query: 258 FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLL 311
F LK +L AFMLRRTK L++ G L LP LTE+TV LQKK+Y S+LRKEL LL
Sbjct: 265 FKILKHVLRAFMLRRTKALLIQSGILALPSLTELTVMVPLTPLQKKLYLSVLRKELQTLL 324
Query: 312 ALSSRTANHQSLQNT------------------------------ASGKLVVLDLLLKKL 341
+ + HQSLQN ASGKLV+LDL+LKKL
Sbjct: 325 TFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEPEPYVEGEHLVQASGKLVMLDLILKKL 384
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ--SAIER 399
+ GHRVLLFAQMTQTLDILQDFLELR+Y+YERLDGS+RAEERFAAI+ FS Q + R
Sbjct: 385 HEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERFAAIKSFSSQPTKGVVR 444
Query: 400 LYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV 459
+++G AFVFMISTRAGGVGLNL+ ADTVIFYEQDWNPQ DKQALQRAHRIGQ+N+
Sbjct: 445 DDNQSG---AFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQLNN- 500
Query: 460 LSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLF 519
VIMRRAERKL+LSH+V+G++ + E D+RSIIFGLHLF
Sbjct: 501 -------------VIMRRAERKLKLSHSVIGEEDATYGKGKYVENEASDMRSIIFGLHLF 547
Query: 520 DPKAINNEESDDLRLS---------GLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEE 570
D E +D S L SM EKV+ MR + S K R FE+NP + +
Sbjct: 548 DTSDTTAETMNDDTASETIKEETMLKLKSMSEKVVLMRSHEPSEKDERAFEINP-NMTDN 606
Query: 571 SDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRR-SPED 622
S ++ S PD +EA+Y SW+EKFKE+S S NT AE R+R +PE+
Sbjct: 607 SGAVVTRVSDSVNVDPDFNEAAYLSWLEKFKESSHSKENTRAELERQRIAPEE 659
>gi|413957251|gb|AFW89900.1| hypothetical protein ZEAMMB73_126422, partial [Zea mays]
Length = 767
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/605 (57%), Positives = 433/605 (71%), Gaps = 49/605 (8%)
Query: 115 LRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYT 174
++YVG + RR++RRT+YE V++ S S LPFDVL+TTYD+ LMDQ FLSQIPW Y
Sbjct: 1 MQYVGGKLHRRDLRRTIYEDVQKASTSSRSFELPFDVLMTTYDIALMDQDFLSQIPWHYA 60
Query: 175 IIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQ 234
+IDEAQRLKNPSSVLYNVL + F+MPRRLL+TGTPIQNNLSELWALMHFC+PS+FG L++
Sbjct: 61 VIDEAQRLKNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCLPSIFGKLDE 120
Query: 235 FLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV- 293
FLSTFK+A S + + K K QF +K +L AFMLRRTK L+E G L LPPLTE+TV
Sbjct: 121 FLSTFKEAGESLTGDEANKAKGQFKIIKHVLKAFMLRRTKFLLIESGILALPPLTELTVM 180
Query: 294 -----LQKKVYASILRKELPKLLALSSRTANHQSLQNT---------------------- 326
LQKK+Y S+LRKELP L++ + ++ HQSLQN
Sbjct: 181 VPLTQLQKKLYMSVLRKELPTLISFARGSSRHQSLQNIVIQLRKVCSHPYLFSGIEPEPY 240
Query: 327 --------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGS 378
ASGKL+VLDL+LKKL+ GHRVLLFAQMTQTLDILQDFLELR Y+YERLDGS
Sbjct: 241 VEGEHLIQASGKLIVLDLILKKLHECGHRVLLFAQMTQTLDILQDFLELRNYTYERLDGS 300
Query: 379 IRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDW 438
+RAEERFAAIR+FS QS + L + ++AFVFMISTRAGGVGLNL+ ADTVIFYEQDW
Sbjct: 301 VRAEERFAAIRNFSSQST-KGLIRDDNRSEAFVFMISTRAGGVGLNLIGADTVIFYEQDW 359
Query: 439 NPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREV 498
NPQ DKQALQRAHRIGQ+NHVLSINLV++ T+EEVIMRRA+RKL+LSHN++G++
Sbjct: 360 NPQADKQALQRAHRIGQLNHVLSINLVSQRTIEEVIMRRADRKLKLSHNIIGEEDGTDGK 419
Query: 499 KERTAVETDDLRSIIFGLHLFDPKAINNEESDD---------LRLSGLNSMVEKVIAMRH 549
+E D+RSIIFGLHLFDP E D+ +L+ L +M EKV+ MR
Sbjct: 420 GGDPGIEASDMRSIIFGLHLFDPADTATETIDEDITAETFSVEKLAKLKTMSEKVVMMRS 479
Query: 550 EQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSN 609
+ S K R FE+NP + ++S ++ + S P L+EA+Y SWV+KFKEAS SS +
Sbjct: 480 HESSEKDERAFEINP-NMTDDSGTVIRRASDSIRIDPGLNEAAYLSWVKKFKEASISSED 538
Query: 610 TIAESGRRR-SPEDKQRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSG 668
GR+R +PE+K K + ++K EEK+LAKWE+ GYQ+L+VK P + + +SD+G
Sbjct: 539 ATVGFGRQRAAPEEKLLKHDVNKQKIEEKRLAKWESLGYQTLAVKEPDITASQN-ISDAG 597
Query: 669 SVQFV 673
S+QFV
Sbjct: 598 SIQFV 602
>gi|224136300|ref|XP_002326827.1| hypothetical protein POPTRDRAFT_781297 [Populus trichocarpa]
gi|222835142|gb|EEE73577.1| hypothetical protein POPTRDRAFT_781297 [Populus trichocarpa]
Length = 485
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 320/472 (67%), Positives = 364/472 (77%), Gaps = 43/472 (9%)
Query: 1 MKYKERLQVAAKIIHDNDERD---GQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVN 57
M Y++RL A II + +P DA E GVTA LKPHQ+EG+SWLI+RY LGVN
Sbjct: 1 MNYEQRLAAATMIIESKSHGESGYATSPFDATEIGVTATLKPHQLEGISWLIQRYHLGVN 60
Query: 58 VLLGD--EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVL 115
V+L +MGLGKTLQAISFLSYLK Q SPGP+LVLCPLSVTDGWVSE+ KFTPKL+VL
Sbjct: 61 VILDICWQMGLGKTLQAISFLSYLKVHQKSPGPYLVLCPLSVTDGWVSEIDKFTPKLKVL 120
Query: 116 RYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTI 175
RYVGE+E +R++R+T++EHVKE SNVS LPFDVLLTTYD+ L+DQ FLSQIPW Y I
Sbjct: 121 RYVGEKEHQRSLRKTIHEHVKESPSSSNVSLLPFDVLLTTYDIALVDQEFLSQIPWHYAI 180
Query: 176 IDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQF 235
+DEAQRLKNP SVLYNVL + FLMPRRLLMTGTPIQNNL+ELWALMHFCMP VFGTL+QF
Sbjct: 181 VDEAQRLKNPKSVLYNVLIDQFLMPRRLLMTGTPIQNNLTELWALMHFCMPLVFGTLDQF 240
Query: 236 LSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV-- 293
LSTF++A +SS K+K QF +LK IL +FMLRRTK +L+ECG+L+LP LTEITV
Sbjct: 241 LSTFREAADASSDHDATKVKRQFKTLKSILKSFMLRRTKSRLIECGNLVLPSLTEITVMA 300
Query: 294 ----LQKKVYASILRKELPKLLALSSRTANHQSLQNT----------------------- 326
LQKKVY SILRKELPKLLALSS +NHQSLQN
Sbjct: 301 PLVSLQKKVYTSILRKELPKLLALSSSASNHQSLQNMVIQLRKACSHPYLFPGIEPEPYE 360
Query: 327 -------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSI 379
ASGKL++LD LL+KL++SGHRVLLFAQMT TLDILQDFLELRKYSYERLDGS+
Sbjct: 361 EGEHLVKASGKLIILDQLLEKLHDSGHRVLLFAQMTHTLDILQDFLELRKYSYERLDGSV 420
Query: 380 RAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTV 431
RAEERFAAIR FS QS R SE+ N +FVFMISTRAGGVGLNLVAADTV
Sbjct: 421 RAEERFAAIRSFSGQSG--RSGSESDQNSSFVFMISTRAGGVGLNLVAADTV 470
>gi|168058055|ref|XP_001781026.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162667507|gb|EDQ54135.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 808
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 334/689 (48%), Positives = 434/689 (62%), Gaps = 100/689 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
+G+TAELKPHQ EG+SWLI RY+LGVN MGLGKTLQ+I L+YLKF++ GPFL
Sbjct: 17 WGITAELKPHQAEGVSWLIGRYVLGVN------MGLGKTLQSIVLLAYLKFARSCKGPFL 70
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP-LPF 149
V+CPLSVT+GW EMA+F PKL VLRYVG + +R +RR++ EHV +Q+ + +P LPF
Sbjct: 71 VICPLSVTEGWALEMARFAPKLRVLRYVGNKGEREELRRSISEHVNKQAPSARTNPDLPF 130
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
DVLL+TY++ + D FLS+I W Y IIDEAQRLKN SVL+ L E +++PRRLL+TGTP
Sbjct: 131 DVLLSTYELAMADVSFLSRIRWSYAIIDEAQRLKNADSVLFKTLDEQYMLPRRLLLTGTP 190
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRG-KIKEQ----FTSLKGI 264
+QNNLSELWAL+HFCMP +F + +FL F A +++ K G KI ++ T L+
Sbjct: 191 VQNNLSELWALLHFCMPLIFTNVEEFLDAFGPA--AAATHKDGDKIVDKEDSILTILRET 248
Query: 265 LSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTA 318
+ FMLRRTK LV L+LPPLTE+T+ +QK+VY S+L+KE PK++ S TA
Sbjct: 249 VKVFMLRRTKAALVHSKALVLPPLTEVTIFSPMANIQKQVYVSVLKKESPKIIGDSPGTA 308
Query: 319 NHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHRV 348
SLQN ASGKL +LD++LKKL+ SGHRV
Sbjct: 309 T--SLQNIVIQLRKACSHPYLFDGIEPEPFQEGEHIVEASGKLKMLDVILKKLHASGHRV 366
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+FAQMT+TLDILQD+LE R YSYERLDGS+RAEERF A+ FS + + +A
Sbjct: 367 LIFAQMTRTLDILQDYLEYRSYSYERLDGSVRAEERFNAVHSFSAGHS--KCGGDAKSGS 424
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
AFVF+++TRAGGVGLNL+ ADTVIFYEQDWNPQ DKQALQRAHRIGQ++ VL+INL+T H
Sbjct: 425 AFVFLLTTRAGGVGLNLIGADTVIFYEQDWNPQADKQALQRAHRIGQISPVLAINLITRH 484
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRS-IIFGLH-LFDPKAINN 526
T++EVIMRRA++KL L+ NV+G D D E + + DLRS I+FG++ L A +
Sbjct: 485 TIDEVIMRRAKKKLELTCNVIGRDDADLETHGPASAVSTDLRSMIMFGINTLHSSDATQD 544
Query: 527 EESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYP 586
E R S L +VE + R GKAG P
Sbjct: 545 TEVG--RSSELERIVEAALNQR-----GKAG----------------------------P 569
Query: 587 DLDEASYRSWVEKFKEASESSSNTIAESGRRRSPEDKQRKLEAARRKAEEKKLAKWEANG 646
L A+ VE ++ AE+ +D +K R+KAE+KK AKW++ G
Sbjct: 570 GLSNATEFGNVELVTLDAQDDG---AENFYNYEGKDFAKK----RQKAEDKKHAKWKSLG 622
Query: 647 YQSLSVKTPVCSPGGDMMSDS-GS-VQFV 673
Y +L++ P + SD+ GS V FV
Sbjct: 623 YHTLAIDDPGAGLQPALSSDNVGSDVHFV 651
>gi|357504557|ref|XP_003622567.1| Receptor-like protein kinase [Medicago truncatula]
gi|355497582|gb|AES78785.1| Receptor-like protein kinase [Medicago truncatula]
Length = 1772
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 267/494 (54%), Positives = 309/494 (62%), Gaps = 116/494 (23%)
Query: 61 GDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGE 120
GDEMGLGKTLQAISFLSYLK Q+S GPFLV+CPLSVTDGWVSE+ K+ PKLEV +YVG+
Sbjct: 142 GDEMGLGKTLQAISFLSYLKVRQLSHGPFLVICPLSVTDGWVSEIVKYAPKLEVFKYVGD 201
Query: 121 REQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQ 180
+E RR++R +EHV LPFDVLLT+YD+ LMD+ FLSQIPW Y IIDEAQ
Sbjct: 202 KEYRRSLRMKTHEHVM----------LPFDVLLTSYDIALMDKDFLSQIPWQYAIIDEAQ 251
Query: 181 RLKNPSSVLYNVLRE--------------------------HFLMPR------RLLMTGT 208
RLKNPSSVL+NVL++ HF MP + L T
Sbjct: 252 RLKNPSSVLFNVLKDRYIMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLDQFLSTFK 311
Query: 209 PIQNNLSELWAL---MHFCMPSVFGTLNQ--------FLSTFKDAVHSSSAP-------- 249
I + S L +H FG N+ +L ++ V S+ P
Sbjct: 312 DISDLTSGNVGLNPPLHSQHNEDFGGGNEGIPNSAIRWLGADRNEVGISNTPSCSGPMSS 371
Query: 250 KRG----------------KIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV 293
+RG K+KE+ L+ +L+AFMLRRTK KL+ECG L+LPPLTE TV
Sbjct: 372 ERGLCLYPNIRSRIVHDSPKVKERLQILRSVLAAFMLRRTKSKLMECGSLVLPPLTETTV 431
Query: 294 L------QKKVYASILRKELPKLLALSSRTANHQSLQNT--------------------- 326
L QKKV SILRKELPKL+ALSS T+NHQSLQNT
Sbjct: 432 LVPLVSLQKKVCMSILRKELPKLVALSSGTSNHQSLQNTVIQLRKACSHPYLFPGIEPEP 491
Query: 327 ---------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDG 377
ASGKL++LD LL+KL+++GHRVLLFAQMT TLDILQD+LEL KYSYERLDG
Sbjct: 492 YEEGEHLVQASGKLLILDQLLRKLHHNGHRVLLFAQMTHTLDILQDYLELSKYSYERLDG 551
Query: 378 SIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADT---VIFY 434
SIRAEERFAAIR FS SA L EA N AFVFMISTRAGGVGLNLVAADT VIFY
Sbjct: 552 SIRAEERFAAIRSFSNSSANTGLNFEANQNGAFVFMISTRAGGVGLNLVAADTVSYVIFY 611
Query: 435 EQDWNPQVDKQALQ 448
EQDWNPQVD+QA Q
Sbjct: 612 EQDWNPQVDRQACQ 625
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%)
Query: 1 MKYKERLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLL 60
+KY++RLQVAAKI+ D+DE G E G+ A LKPHQV+G+SWLIRRY LGVNV+L
Sbjct: 3 LKYEQRLQVAAKIMLDDDESSGDAAPSEEELGIKATLKPHQVDGISWLIRRYKLGVNVVL 62
>gi|193848582|gb|ACF22767.1| SNF2P [Brachypodium distachyon]
Length = 721
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/348 (60%), Positives = 252/348 (72%), Gaps = 3/348 (0%)
Query: 327 ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFA 386
ASGKL+VLDL+LKKL+ GHRVLLFAQMT TLDILQDFLELR Y+YERLDGS+RAEERFA
Sbjct: 241 ASGKLIVLDLILKKLHRLGHRVLLFAQMTHTLDILQDFLELRNYTYERLDGSVRAEERFA 300
Query: 387 AIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA 446
AIR FS Q + + AFVFMISTRAGGVGLNL+ ADTVIFYEQDWNPQ DKQA
Sbjct: 301 AIRKFSSQPTKGVARDDDNPSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQA 360
Query: 447 LQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVET 506
LQRAHRIGQ+NHVLSINLV++ T+EEVIMRRAERKL+LSHN+ GD+ E E
Sbjct: 361 LQRAHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDEDTTDGKGEDLRNEA 420
Query: 507 DDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVA 566
D+RSIIFGLH FDP E ++ L+ L SM E VI MR + S K R FE+NP
Sbjct: 421 SDMRSIIFGLHQFDPADTATETMNEETLAKLESMSENVIKMRAHEPSEKDDRAFEINP-N 479
Query: 567 LLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRRS-PEDKQR 625
L + S ++ + S P ++EA+Y SWV KFKEAS S N E R+RS PE+K
Sbjct: 480 LTDSSAAVITRTCDSINIDPGINEAAYLSWVGKFKEASHSIENVTVEQERQRSAPEEKVL 539
Query: 626 KLEAARRKAEEKKLAKWEANGYQSLSVKTPVCSPGGDMMSDSGSVQFV 673
K EA ++KAEEK+LAKW+ +GY++L+VK P P + +SDSGSVQ V
Sbjct: 540 KREANKKKAEEKRLAKWKTSGYETLTVKDPDDIPNQN-ISDSGSVQLV 586
Score = 245 bits (626), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/185 (61%), Positives = 144/185 (77%), Gaps = 5/185 (2%)
Query: 21 DGQTPV---DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS 77
D +P+ +A+ GVT +LKPHQ++G+ WLIRRY LGVNVLLGDEMGLGKTLQAIS LS
Sbjct: 21 DHHSPLPRRSSADLGVTVQLKPHQLDGVHWLIRRYHLGVNVLLGDEMGLGKTLQAISLLS 80
Query: 78 YLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKE 137
YLK ++PGPFLVLCPLSVT GW SE A+F P L+V++Y G++ RR++RR M+E V++
Sbjct: 81 YLKIQSITPGPFLVLCPLSVTHGWSSEFARFCPTLKVIQYAGDKAHRRDLRRIMHEGVQK 140
Query: 138 QSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHF 197
S SN + LPFDV+LT+YD+ LMDQ FLSQIPW Y +IDEAQRLKNPSS ++ L +F
Sbjct: 141 SSASSNSNELPFDVMLTSYDIALMDQDFLSQIPWLYVVIDEAQRLKNPSS--FSALWMNF 198
Query: 198 LMPRR 202
+ R
Sbjct: 199 FLLSR 203
>gi|380818206|gb|AFE80977.1| chromodomain-helicase-DNA-binding protein 1-like [Macaca mulatta]
gi|383423055|gb|AFH34741.1| chromodomain-helicase-DNA-binding protein 1-like [Macaca mulatta]
Length = 900
Score = 363 bits (931), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 260/713 (36%), Positives = 358/713 (50%), Gaps = 133/713 (18%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ L YL
Sbjct: 37 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALLIYLAGRLND 96
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S
Sbjct: 97 EGPFLILCPLSVLSNWKEEMQRFAPSLSCVTYAGDKEERACLQQDL----KQESH----- 147
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 148 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 203
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 204 TGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFVQRYQDIEKES---------ESASELHK 254
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K + LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 255 LLQPFLLRRVKADVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 307
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 308 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLYLLDKLLAFLYSGGHR 367
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 368 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 414
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 415 PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 474
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF------- 519
TVEE++ R+A KL+L++ ++ ++ +A L I+ FGL
Sbjct: 475 DTVEEIVSRKAASKLQLTNMIIEGGHFTLGAQKPSADADLQLSEILKFGLDKLLASEGNT 534
Query: 520 ----DPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLM 575
D ++I E D +S E I EQ GK N + L E D
Sbjct: 535 MDEIDLESILGETKDGQWVSDALPAAEGGI---REQEEGK-------NHMYLFEGKDYSK 584
Query: 576 HESFASATSYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---E 621
S S+ L ++ +EK + S N + E +R SP E
Sbjct: 585 EPSKEDRKSFEQLVNLQ-KTLLEKTSQEGRSLRNKGSVLIPGLVEGSTKRKQVLSPEELE 643
Query: 622 DKQRK-----------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
D+Q+K +E +R+ EE KK+A WE+N YQS + + P
Sbjct: 644 DRQKKRQEAAAKRRRLVEEKKRQKEEAEHKKKMAWWESNHYQSFCLPSEESEP 696
>gi|355558362|gb|EHH15142.1| hypothetical protein EGK_01192, partial [Macaca mulatta]
Length = 869
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 257/702 (36%), Positives = 352/702 (50%), Gaps = 132/702 (18%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ L YL GPFL+LCPLS
Sbjct: 17 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALLIYLAGRLNDEGPFLILCPLS 76
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V W EM +F P L + Y G++E+R +++ + K++S F VLLTTY
Sbjct: 77 VLSNWKEEMQRFAPSLSCVTYAGDKEERACLQQDL----KQESH--------FHVLLTTY 124
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L E
Sbjct: 125 EICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQE 183
Query: 217 LWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
L++L+ F P +F + F+ ++D S E + L +L F+LRR K
Sbjct: 184 LYSLLSFVEPDLFSKEEVGDFVQRYQDIEKES---------ESASELHKLLQPFLLRRVK 234
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT-- 326
+ LP TE+ + LQKK Y +IL K+L A + TA LQN
Sbjct: 235 ADVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENETAKKVKLQNILS 287
Query: 327 ----------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
ASGKL +LD LL LY+ GHRVLLF+QMTQ L
Sbjct: 288 QLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLYLLDKLLAFLYSGGHRVLLFSQMTQML 347
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DILQD+++ R YSYER+DGS+R EER AI++F G FVF++STRA
Sbjct: 348 DILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQPIFVFLLSTRA 394
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A
Sbjct: 395 GGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVSRKA 454
Query: 479 ERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF-----------DPKAINN 526
KL+L++ ++ ++ +A L I+ FGL D ++I
Sbjct: 455 ASKLQLTNMIIEGGHFTLGAQKPSADADLQLSEILKFGLDKLLASEGNTMDEIDLESILG 514
Query: 527 EESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYP 586
E D +S E I EQ GK N + L E D S S+
Sbjct: 515 ETKDGQWVSDALPAAEGGI---REQEEGK-------NHMYLFEGKDYSKEPSKEDRKSFE 564
Query: 587 DLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK------ 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 565 QLVNLQ-KTLLEKTSQEGRSLRNKGSVLIPGLVEGSTKRKQVLSPEELEDRQKKRQEAAA 623
Query: 627 -----LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 624 KRRRLVEEKKRQKEEAEHKKKMAWWESNHYQSFCLPSEESEP 665
>gi|28175792|gb|AAH43501.1| Similar to RIKEN cDNA 4432404A22 gene, partial [Homo sapiens]
Length = 890
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 356/703 (50%), Gaps = 113/703 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 28 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 87
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 88 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 138
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 139 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 194
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 195 TGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASELHK 245
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 246 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 298
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 299 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHR 358
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 359 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 405
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 406 PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 465
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 466 DTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGST 525
Query: 526 NEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
+E D + G + V G ++ N + L E D S S+
Sbjct: 526 MDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSF 585
Query: 586 PDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK----- 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 586 EQLVNLQ-KTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAA 644
Query: 627 ------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 645 AKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 687
>gi|7022541|dbj|BAA91637.1| unnamed protein product [Homo sapiens]
Length = 831
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 356/703 (50%), Gaps = 113/703 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 35 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 94
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 95 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 145
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 146 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 201
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 202 TGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASELHK 252
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 253 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 305
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 306 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHR 365
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F Q
Sbjct: 366 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPI----------- 414
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 415 --FVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 472
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 473 DTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGST 532
Query: 526 NEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
+E D + G + V G ++ N + L E D S S+
Sbjct: 533 MDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSF 592
Query: 586 PDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK----- 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 593 EQLVNLQ-KTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAA 651
Query: 627 ------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 652 AKRRRLIEEKKRQKEEAEHKKKVAWWESNNYQSFCLPSEESEP 694
>gi|311033359|sp|Q86WJ1.2|CHD1L_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like;
AltName: Full=Amplified in liver cancer protein 1
gi|55663194|emb|CAH72650.1| chromodomain helicase DNA binding protein 1-like [Homo sapiens]
Length = 897
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 356/703 (50%), Gaps = 113/703 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 35 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 94
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 95 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 145
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 146 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 201
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 202 TGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASELHK 252
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 253 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 305
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 306 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHR 365
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 366 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 412
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 413 PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 472
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 473 DTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGST 532
Query: 526 NEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
+E D + G + V G ++ N + L E D S S+
Sbjct: 533 MDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSF 592
Query: 586 PDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK----- 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 593 EQLVNLQ-KTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAA 651
Query: 627 ------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 652 AKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 694
>gi|12654665|gb|AAH01171.1| Unknown (protein for IMAGE:3355762), partial [Homo sapiens]
Length = 896
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 356/703 (50%), Gaps = 113/703 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 34 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 93
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 94 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 144
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 145 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 200
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 201 TGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASELHK 251
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 252 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 304
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 305 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHR 364
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 365 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 411
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 412 PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 471
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 472 DTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGST 531
Query: 526 NEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
+E D + G + V G ++ N + L E D S S+
Sbjct: 532 MDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSF 591
Query: 586 PDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK----- 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 592 EQLVNLQ-KTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAA 650
Query: 627 ------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 651 AKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 693
>gi|410171388|ref|XP_003960259.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
5 [Homo sapiens]
Length = 878
Score = 360 bits (924), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 356/703 (50%), Gaps = 113/703 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 35 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 94
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 95 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 145
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 146 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 201
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 202 TGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASELHK 252
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 253 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 305
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 306 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHR 365
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F Q
Sbjct: 366 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPI----------- 414
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 415 --FVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 472
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 473 DTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGST 532
Query: 526 NEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
+E D + G + V G ++ N + L E D S S+
Sbjct: 533 MDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSF 592
Query: 586 PDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK----- 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 593 EQLVNLQ-KTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAA 651
Query: 627 ------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 652 AKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 694
>gi|148342542|gb|ABQ59048.1| CHD1L protein [Homo sapiens]
Length = 900
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 254/705 (36%), Positives = 356/705 (50%), Gaps = 114/705 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 35 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 94
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 95 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 145
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE--HFLMPRRL 203
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + L
Sbjct: 146 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEVFEFSVVFSL 202
Query: 204 LMTGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSL 261
L+TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 203 LLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASEL 253
Query: 262 KGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS 315
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A +
Sbjct: 254 HKLLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFEN 306
Query: 316 RTANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSG 345
TA LQN ASGKL +LD LL LY+ G
Sbjct: 307 ETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLQLLDKLLAFLYSGG 366
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
HRVLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 367 HRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------G 413
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 414 QQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLI 473
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKA 523
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 474 GRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEG 533
Query: 524 INNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASAT 583
+E D + G + V G ++ N + L E D S
Sbjct: 534 STMDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRK 593
Query: 584 SYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK--- 626
S+ L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 594 SFEQLVNLQ-KTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQE 652
Query: 627 --------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 653 AAAKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 697
>gi|373428660|ref|NP_004275.4| chromodomain-helicase-DNA-binding protein 1-like isoform 1 [Homo
sapiens]
gi|410171380|ref|XP_003960255.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
1 [Homo sapiens]
gi|28629217|gb|AAO49505.1| ALC1 [Homo sapiens]
Length = 897
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 356/703 (50%), Gaps = 113/703 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 35 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 94
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 95 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 145
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 146 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 201
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 202 TGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASELHK 252
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 253 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 305
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 306 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHR 365
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 366 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 412
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 413 PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 472
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 473 DTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGST 532
Query: 526 NEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
+E D + G + V G ++ N + L E D S S+
Sbjct: 533 MDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSF 592
Query: 586 PDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK----- 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 593 EQLVNLQ-KTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAA 651
Query: 627 ------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 652 AKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 694
>gi|410171382|ref|XP_003960256.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
2 [Homo sapiens]
Length = 900
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 254/705 (36%), Positives = 356/705 (50%), Gaps = 114/705 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 35 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 94
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 95 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 145
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE--HFLMPRRL 203
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + L
Sbjct: 146 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEVFEFSVVFSL 202
Query: 204 LMTGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSL 261
L+TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 203 LLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASEL 253
Query: 262 KGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS 315
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A +
Sbjct: 254 HKLLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFEN 306
Query: 316 RTANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSG 345
TA LQN ASGKL +LD LL LY+ G
Sbjct: 307 ETAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGG 366
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
HRVLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 367 HRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------G 413
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 414 QQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLI 473
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKA 523
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 474 GRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEG 533
Query: 524 INNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASAT 583
+E D + G + V G ++ N + L E D S
Sbjct: 534 STMDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRK 593
Query: 584 SYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK--- 626
S+ L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 594 SFEQLVNLQ-KTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQE 652
Query: 627 --------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 653 AAAKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 697
>gi|119571321|gb|EAW50936.1| chromodomain helicase DNA binding protein 1-like, isoform CRA_a
[Homo sapiens]
Length = 897
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 355/703 (50%), Gaps = 113/703 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 35 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 94
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 95 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 145
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 146 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 201
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E L
Sbjct: 202 TGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESGNELHK 252
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 253 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 305
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 306 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHR 365
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F Q
Sbjct: 366 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPI----------- 414
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 415 --FVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 472
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 473 DTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGST 532
Query: 526 NEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
+E D + G + V G ++ N + L E D S S+
Sbjct: 533 MDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSF 592
Query: 586 PDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK----- 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 593 EQLVNLQ-KTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAA 651
Query: 627 ------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 652 AKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 694
>gi|355745621|gb|EHH50246.1| hypothetical protein EGM_01042, partial [Macaca fascicularis]
Length = 868
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 256/702 (36%), Positives = 351/702 (50%), Gaps = 132/702 (18%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EG++WL + + +LGDEMGLGKT Q I+ L YL GPFL+LCPLS
Sbjct: 17 LRSYQLEGVNWLAQHFHCQNGCILGDEMGLGKTCQTIALLIYLAGRLNDEGPFLILCPLS 76
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V W EM +F P L + Y G++E+R +++ + K++S F VLLTTY
Sbjct: 77 VLSNWKEEMQRFAPSLSCVTYAGDKEERACLQQDL----KQESH--------FHVLLTTY 124
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L E
Sbjct: 125 EICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQE 183
Query: 217 LWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
L++L+ F P +F + F+ ++D S E + L +L F+LRR K
Sbjct: 184 LYSLLSFVEPDLFSKEEVGDFVQRYQDIEKES---------ESASELHKLLQPFLLRRVK 234
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT-- 326
+ LP TE+ + LQKK Y +IL K+L A + TA LQN
Sbjct: 235 ADVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENETAKKVKLQNILS 287
Query: 327 ----------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
ASGKL +LD LL LY+ GHRVLLF+QMTQ L
Sbjct: 288 QLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQML 347
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DILQD+++ R YSYER+DGS+R EER AI++F G FVF++STRA
Sbjct: 348 DILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQPIFVFLLSTRA 394
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A
Sbjct: 395 GGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVSRKA 454
Query: 479 ERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF-----------DPKAINN 526
KL+L++ ++ ++ +A L I+ FGL D ++I
Sbjct: 455 ASKLQLTNMIIEGGHFTLGAQKPSADADLQLSEILKFGLDKLLASEGNTMDEIDLESILG 514
Query: 527 EESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYP 586
E D +S E I EQ GK N + L E D S S+
Sbjct: 515 ETKDGQWVSDALPAAEGGI---REQEEGK-------NHMYLFEGKDYSKEPSKEDRKSFE 564
Query: 587 DLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK------ 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 565 QLVNLQ-KTLLEKTSQEGRSLRNKGSVLIPGLVEGSTKRKQVLSPEELEDRQKKRQEAAA 623
Query: 627 -----LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 624 KRRRLVEEKKRQKEEAEHKKKMAWWESNHYQSFCLPSEESEP 665
>gi|114558326|ref|XP_001158033.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform
8 [Pan troglodytes]
gi|410295560|gb|JAA26380.1| chromodomain helicase DNA binding protein 1-like [Pan troglodytes]
gi|410350041|gb|JAA41624.1| chromodomain helicase DNA binding protein 1-like [Pan troglodytes]
Length = 896
Score = 357 bits (917), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 253/703 (35%), Positives = 356/703 (50%), Gaps = 113/703 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 35 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 94
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 95 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 145
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 146 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 201
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D K E + L
Sbjct: 202 TGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIE---------KEPESASELHK 252
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQK+ Y +IL K+L A + T
Sbjct: 253 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKRYYKAILMKDLD---AFENET 305
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 306 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAFLYSGGHR 365
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F Q
Sbjct: 366 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGRQPI----------- 414
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 415 --FVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 472
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 473 DTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGST 532
Query: 526 NEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
+E D + G + V G ++ N + L E D S S+
Sbjct: 533 MDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSF 592
Query: 586 PDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK----- 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 593 EQLVNLQ-KTLLEKTSQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAA 651
Query: 627 ------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 652 AKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 694
>gi|395729957|ref|XP_002810379.2| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform
1 [Pongo abelii]
Length = 900
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 258/720 (35%), Positives = 357/720 (49%), Gaps = 133/720 (18%)
Query: 20 RDGQTPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSY 78
R G D ++G+T L+ +Q+EG++WL + + +LGDEMGLGKT Q I+ Y
Sbjct: 30 RAGVQEQDLRQWGLTGIHLRSYQLEGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIY 89
Query: 79 LKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ 138
L GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++
Sbjct: 90 LTGRLNDEGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQE 145
Query: 139 SQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFL 198
S+ F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F
Sbjct: 146 SR--------FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FS 196
Query: 199 MPRRLLMTGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKE 256
+ LL+TGTPIQN+L EL++L+ F P +F + F+ ++D S E
Sbjct: 197 VVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------E 247
Query: 257 QFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKL 310
+ L +L F+LRR K ++ LP TE+ + LQKK Y +IL K+L
Sbjct: 248 SASELHKLLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD-- 301
Query: 311 LALSSRTANHQSLQNT------------------------------ASGKLVVLDLLLKK 340
A + A LQN ASGKL +LD LL
Sbjct: 302 -AFENEMAKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAF 360
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
LY+ GHRVLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F
Sbjct: 361 LYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF--------- 411
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
G FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V
Sbjct: 412 ----GQQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 467
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF 519
I L+ TVEE++ R+A KL+L++ ++ ++ A L I+ FGL
Sbjct: 468 VIRLIGRDTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADFQLSEILKFGLDKL 527
Query: 520 -----------DPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALL 568
D ++I E D +S E EQ GK N + L
Sbjct: 528 LASEGSTMDEIDLESILGETKDGQWVSDALPAAE---GGSREQEEGK-------NHMYLF 577
Query: 569 EESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR--- 618
E D S S+ L ++ +EK + S N + E +R
Sbjct: 578 EGKDYSKEPSKEDRKSFEQLVNLQ-KTLLEKTSQEGRSLRNKGSVLIPGLVEGSTKRKRV 636
Query: 619 -SP---EDKQRK-----------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
SP ED+Q+K +E +R+ EE KK+A WE+N YQS + + P
Sbjct: 637 LSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 696
>gi|410171404|ref|XP_003960267.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
13 [Homo sapiens]
Length = 673
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 209/502 (41%), Positives = 285/502 (56%), Gaps = 81/502 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 35 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 94
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 95 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 145
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 146 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 201
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 202 TGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASELHK 252
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 253 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 305
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 306 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHR 365
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 366 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 412
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 413 PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 472
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
TVEE++ R+A KL+L++ ++
Sbjct: 473 DTVEEIVYRKAASKLQLTNMII 494
>gi|426331164|ref|XP_004026561.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
1 [Gorilla gorilla gorilla]
Length = 898
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 251/692 (36%), Positives = 348/692 (50%), Gaps = 112/692 (16%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL GPFL+LCPLS
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLVGRLNDEGPFLILCPLS 105
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V W EM +F P L + Y G++E+R +++ + K++S F VLLTTY
Sbjct: 106 VLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQES--------CFHVLLTTY 153
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L E
Sbjct: 154 EICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQE 212
Query: 217 LWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
L++L+ F P +F + F+ ++D S E L +L F+LRR K
Sbjct: 213 LYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESAGELHKLLQPFLLRRVK 263
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT-- 326
++ LP TE+ + LQKK Y +IL K+L A + TA LQN
Sbjct: 264 AEVA----TELPRKTEVVIYHGMSALQKKYYKAILMKDLD---AFENETAKKVKLQNILS 316
Query: 327 ----------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
ASGKL +LD LL LY+ GHRVLLF+QMTQ L
Sbjct: 317 QLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAILYSGGHRVLLFSQMTQML 376
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DILQD+++ R YSYER+DGS+R EER AI++F Q FVF++STRA
Sbjct: 377 DILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPI-------------FVFLLSTRA 423
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A
Sbjct: 424 GGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKA 483
Query: 479 ERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNEESDDLRLSG 536
KL+L++ ++ ++ A L I+ FGL L + +E D + G
Sbjct: 484 ASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILG 543
Query: 537 LNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSW 596
+ V G ++ N + L E D S S+ L ++
Sbjct: 544 ETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQ-KTL 602
Query: 597 VEKFKEASESSSN-------TIAESGRRR----SP---EDKQRK-----------LEAAR 631
+EK + S N + E +R SP ED+Q+K +E +
Sbjct: 603 LEKTSQEGRSLRNRGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKK 662
Query: 632 RKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
R+ EE KK+A WE+N YQS + + P
Sbjct: 663 RQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 694
>gi|405970083|gb|EKC35018.1| Chromodomain-helicase-DNA-binding protein 1-like protein
[Crassostrea gigas]
Length = 807
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 210/518 (40%), Positives = 301/518 (58%), Gaps = 81/518 (15%)
Query: 9 VAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGK 68
V K I DND D A+ L+ +Q+ G++WLI G +LGDEMGLGK
Sbjct: 12 VTEKYIKDNDT---LKKYDWADL----PLRQYQLSGVNWLIHCTKKGHGAILGDEMGLGK 64
Query: 69 TLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIR 128
T Q I+FLSYLK + LV+CP SV + W E +F+P L++ Y+G++++R +
Sbjct: 65 TCQTIAFLSYLKKANRQN---LVVCPRSVLENWAEEFKRFSPSLKIQTYIGDKDKRAELA 121
Query: 129 RTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSV 188
++ +K+ + PF +LLTTY++ L D FLS IPW I+DEA RLKN S+
Sbjct: 122 SSIKRDLKKGRE-------PFHILLTTYELCLKDDAFLSSIPWGAMIVDEAHRLKNSESL 174
Query: 189 LYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQ--FLSTFKDAVHSS 246
LY L + + + R+L+TGTP+QNNL EL++L+ F P F Q F+ FKD ++
Sbjct: 175 LYRTLAD-WDIDYRILLTGTPVQNNLDELYSLLSFVAPRKFRLSGQEKFVRKFKDITNNK 233
Query: 247 SAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYA 300
A + L ++ ++LRRTK+ +++ LP ++ I+ +QKK+Y
Sbjct: 234 GA----------SELHDLIKPYLLRRTKEVVLKD----LPKKSDLVMYHGISKVQKKLYK 279
Query: 301 SILRKEL------------PKLLALS---SRTANHQSLQN--------------TASGKL 331
++L K++ P L+ + + NH L + ASGKL
Sbjct: 280 ALLTKDISVFDTNRPGGSSPSLMNILMQLRKCVNHPYLFDGIEPEPFELGEHLVEASGKL 339
Query: 332 VVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHF 391
V++D LL L +GH+VL+F+QMT LDILQD+L R+YSYERLDGS+R EERF A+++F
Sbjct: 340 VLIDRLLNYLKTTGHKVLMFSQMTHMLDILQDYLGYREYSYERLDGSVRGEERFLAVQNF 399
Query: 392 SVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAH 451
+ S D FVF++ST+AGG GLNLVAADTVIF + D+NPQ D QA RAH
Sbjct: 400 NKNS------------DTFVFLLSTKAGGQGLNLVAADTVIFVDSDFNPQNDLQAAARAH 447
Query: 452 RIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
RIGQ V I L+ +TVEE+I++RAE KL+L+ V+
Sbjct: 448 RIGQTRPVRVIRLIGRNTVEEIILKRAEDKLKLTEKVI 485
>gi|410968156|ref|XP_003990576.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Felis
catus]
Length = 888
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 208/502 (41%), Positives = 284/502 (56%), Gaps = 81/502 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL + + +LGDEMGLGKT Q I+ YL
Sbjct: 25 DLRQWGLTGIHLRSYQLEGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 84
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R ++++ + K++S+
Sbjct: 85 EGPFLILCPLSVLSNWTEEMVRFAPGLSCVTYAGDKEERAHLQQDL----KQESR----- 135
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 136 ---FHVLLTTYEICLKDSSFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 191
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P VF + F+ +++ S E L
Sbjct: 192 TGTPIQNSLQELYSLLSFVEPDVFPKEQVGDFVQRYQEIEKES---------ESANELHK 242
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 243 LLQPFLLRRVKAEVAT----ELPKKTEVVIYHGLSALQKKYYKAILMKDLA---AFENET 295
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 296 AKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSRGHR 355
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 356 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 402
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F+F++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L++
Sbjct: 403 PIFIFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLISR 462
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
TVEE++ R+A KL+L+ V+
Sbjct: 463 DTVEEIVCRKAASKLQLTSTVI 484
>gi|83715974|ref|NP_001032909.1| chromodomain-helicase-DNA-binding protein 1-like [Bos taurus]
gi|122139236|sp|Q3B7N1.1|CHD1L_BOVIN RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like
gi|78174364|gb|AAI07535.1| Chromodomain helicase DNA binding protein 1-like [Bos taurus]
gi|296489521|tpg|DAA31634.1| TPA: chromodomain-helicase-DNA-binding protein 1-like [Bos taurus]
Length = 897
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 207/502 (41%), Positives = 285/502 (56%), Gaps = 81/502 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+P+Q++G++WL + + +LGDEMGLGKT Q I+ YL
Sbjct: 37 DLRQWGLTGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 96
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++++R +++ + K++S+
Sbjct: 97 EGPFLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDL----KQESR----- 147
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 148 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 203
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 204 TGTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKES---------ESASELYK 254
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 255 LLQPFLLRRVKAEVA----TELPRKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 307
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 308 AKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSKGHR 367
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+L+ R YSYER+DGS+R EER AI++F G
Sbjct: 368 VLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 414
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGGVG+NL AADTVIF++ D+NPQ D QA RAHRIGQ V I L+
Sbjct: 415 PIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 474
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
TVEE++ R+A KL+L++ ++
Sbjct: 475 DTVEEIVYRKAASKLQLTNTII 496
>gi|449283893|gb|EMC90487.1| Chromodomain-helicase-DNA-binding protein 1-like protein, partial
[Columba livia]
Length = 867
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 210/503 (41%), Positives = 286/503 (56%), Gaps = 81/503 (16%)
Query: 26 VDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQM 84
D +G+T +L+P+Q+EG++WL++ Y + +LGDEMGLGKT Q IS L YL
Sbjct: 4 ADVHRWGLTGIKLRPYQIEGVNWLVQCYEVQHGCILGDEMGLGKTCQTISLLLYLTKKIT 63
Query: 85 SPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNV 144
+ FL+LCPLSV W E+ +F P L + Y+G +E+R ++ +++K+QS+
Sbjct: 64 NKERFLILCPLSVLSNWKEELERFAPGLSFVTYIGNKEERPKLQ----QNLKDQSR---- 115
Query: 145 SPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLL 204
F LLTTY++ L D FL W ++DEA RLKN SS+LY L E F + LL
Sbjct: 116 ----FHALLTTYEICLKDAAFLKSFNWAALVVDEAHRLKNQSSLLYKTLSE-FAVGFSLL 170
Query: 205 MTGTPIQNNLSELWALMHFCMPSVFG--TLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+TGTPIQN+L EL++L+ P +F + +F+ ++ A+ S P + L
Sbjct: 171 LTGTPIQNSLQELYSLLSLIEPDIFPREQVKEFVDYYQ-AIEKESEPAK--------ELH 221
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALSSR 316
+L F+LRR K ++ LP E+ + LQ+K Y +IL K+L A S
Sbjct: 222 NLLQPFLLRRVKSEVAA----ELPKKVEVVLYHGMSALQRKYYKAILTKDLD---AFESE 274
Query: 317 TANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGH 346
T +LQN ASGKL +LD LL L+ GH
Sbjct: 275 TGRKVTLQNVLIQLRKCVAHPYLFNGVEPEPFEIGEHIVEASGKLCLLDKLLSFLHAGGH 334
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVLLF+QMTQ LDILQD+++ R YSYERLDGS+R EER AI++F G
Sbjct: 335 RVLLFSQMTQLLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNF-------------GQ 381
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
F+F++STRAGGVG+NL AADTVIF + D+NPQ D QA+ RAHRIGQ V I L+
Sbjct: 382 QPIFIFLLSTRAGGVGMNLTAADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVKIIRLIG 441
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
TVEE+I RRA KLRL++ VV
Sbjct: 442 RDTVEEIIYRRAASKLRLTNAVV 464
>gi|301788384|ref|XP_002929608.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Ailuropoda melanoleuca]
Length = 886
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 207/502 (41%), Positives = 283/502 (56%), Gaps = 81/502 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL + + +LGDEMGLGKT Q I+ YL
Sbjct: 25 DLRQWGLTGIHLRSYQLEGVNWLAQCFHGQNGCILGDEMGLGKTCQTIALFIYLAGRLND 84
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +I++ + K++S+
Sbjct: 85 EGPFLILCPLSVLSNWTEEMERFAPGLSCITYAGDKEERAHIQQDL----KQESR----- 135
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F LL+
Sbjct: 136 ---FHVLLTTYEICLKDSSFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSTVFSLLL 191
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 192 TGTPIQNSLQELYSLLSFVEPDLFPKEQVGDFVQHYQDIEKES---------ESASELHK 242
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A +
Sbjct: 243 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENEM 295
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 296 AKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLYLLDKLLAFLYSRGHR 355
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 356 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 402
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F+F++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 403 PVFIFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 462
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
TVEE++ R+A KL+L++ ++
Sbjct: 463 DTVEEIVYRKAASKLQLTNTII 484
>gi|338724903|ref|XP_001497220.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like isoform 1 [Equus caballus]
Length = 914
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 205/499 (41%), Positives = 279/499 (55%), Gaps = 81/499 (16%)
Query: 30 EFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGP 88
E+G+T L +Q+EG++WL +R+ +LGDEMGLGKT QAI+ YL GP
Sbjct: 40 EWGLTGIHLHSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQAIALFIYLAGRLNDEGP 99
Query: 89 FLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP 148
FL+LCPLSV W EM +F P L + Y G++E+R ++++ + +
Sbjct: 100 FLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKEERAHLQQDLKQEA------------C 147
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY++ L D FL PW ++DEA RLKN S+L+ L E F + LL+TGT
Sbjct: 148 FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQGSLLHKTLSE-FSVVFSLLLTGT 206
Query: 209 PIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
PIQN+L EL++L+ F P +F + F+ ++D S E + L +L
Sbjct: 207 PIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKES---------ESASELHQLLQ 257
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANH 320
F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + TA
Sbjct: 258 PFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENETAKK 310
Query: 321 QSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHRVLL 350
LQN ASGKL +LD LL LY+ HRVLL
Sbjct: 311 VKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSRSHRVLL 370
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G F
Sbjct: 371 FSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQKPIF 417
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+F++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TV
Sbjct: 418 IFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTV 477
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE++ R+A KL+L++ ++
Sbjct: 478 EEIVCRKAASKLQLTNTII 496
>gi|194036340|ref|XP_001928553.1| PREDICTED: chromodomain helicase DNA binding protein 1-like [Sus
scrofa]
Length = 901
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 258/714 (36%), Positives = 357/714 (50%), Gaps = 135/714 (18%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D +G+T L+P+Q+EG++WL + + +LGDEMGLGKT Q I+ YL
Sbjct: 37 DLRRWGLTGIHLRPYQLEGVNWLAQCFHYQNGCILGDEMGLGKTCQTIAVFIYLAGRLND 96
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM + P L + Y G++E+R ++++ + K++S
Sbjct: 97 EGPFLILCPLSVLSNWKEEMERCAPGLCCVTYAGDKEERAHLQQDL----KQESG----- 147
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN +S+L+ L E F + RLL+
Sbjct: 148 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQNSLLHKSLSE-FSVAFRLLL 203
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 204 TGTPIQNSLQELYSLLSFVEPDLFSKEEVEDFVQRYEDIEKES---------ESASELYK 254
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A +
Sbjct: 255 LLQPFLLRRVKAEVAA----ELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENEM 307
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 308 AKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSKGHR 367
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 368 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 414
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F+F++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 415 PIFIFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 474
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETD-DLRSII-FGLHLF------ 519
TVEE+I R+A KL+L++ ++ +R A E D L I+ FGL
Sbjct: 475 DTVEEIICRKAASKLKLTNTIIEGGRFTLGA-QRPAAEADLQLSEILKFGLDKLLSSEGS 533
Query: 520 -----DPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLL 574
D ++I E D +S E+ EQ GK N + L E D
Sbjct: 534 TMDEIDLESILGETKDGQWISDALPSTEE---GSREQEEGK-------NHMYLFEGKDYS 583
Query: 575 MHESFASATSYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SPED- 622
S S+ L ++ +EK + N + E +R SPE+
Sbjct: 584 KEPSKEDRKSFEQLVNLQ-KTLLEKTGQEGRLLRNKGSVLIPGLVEGSTQRKRILSPEEL 642
Query: 623 ----KQRKLEAARRK-------------AEEKKLAKWEANGYQSLSVKTPVCSP 659
K+R+ AA+RK +KK+A WE+NGYQS + + P
Sbjct: 643 EDRRKKRQEAAAKRKRLIEEKKRKKEEAEHKKKMAWWESNGYQSFCLPSEDSEP 696
>gi|426216399|ref|XP_004002451.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
3 [Ovis aries]
Length = 903
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 207/511 (40%), Positives = 286/511 (55%), Gaps = 89/511 (17%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+P+Q++G++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 37 DLRQWGLTGIRLRPYQLQGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 96
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++++R +++ + K++S+
Sbjct: 97 EGPFLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDL----KQESR----- 147
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE---------H 196
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E
Sbjct: 148 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEIFTLFICIFE 204
Query: 197 FLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFG--TLNQFLSTFKDAVHSSSAPKRGKI 254
F + LL+TGTPIQN+L EL++L+ F P +F + F+ ++D S
Sbjct: 205 FSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFSREQVEDFVQRYQDIEKES-------- 256
Query: 255 KEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELP 308
E + L +L F+LRR K ++ LP TE+ + LQKK Y +IL K+L
Sbjct: 257 -ESASELYKLLQPFLLRRVKAEVA----TELPRKTEVVIYHGMSALQKKYYKAILMKDLD 311
Query: 309 KLLALSSRTANHQSLQNT------------------------------ASGKLVVLDLLL 338
A + A LQN ASGKL +LD LL
Sbjct: 312 ---AFENEMAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLHLLDKLL 368
Query: 339 KKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIE 398
LY++GHRVLLF+QMTQ LDILQD+L+ R YSYER+DGS+R EER AI++F
Sbjct: 369 AFLYSTGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNF------- 421
Query: 399 RLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
G F F++STRAGGVG+NL AADTVIF++ D+NPQ D QA RAHRIGQ
Sbjct: 422 ------GQQPIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKS 475
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
V I L+ TVEE++ R+A KL+L++ ++
Sbjct: 476 VKVIRLIGRDTVEEIVYRKAASKLQLTNMII 506
>gi|390476595|ref|XP_002759879.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Callithrix jacchus]
Length = 859
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 253/702 (36%), Positives = 349/702 (49%), Gaps = 132/702 (18%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL GPFL+LCPLS
Sbjct: 7 LRSYQLEGVNWLAQRFHGQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 66
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V W EM +F P L + Y G++E+R ++++ + K+ S+ F VLLTTY
Sbjct: 67 VLSNWKEEMQRFAPGLSCVTYAGDKEERAHLQQDL----KQDSR--------FHVLLTTY 114
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L E
Sbjct: 115 EICLKDASFLKLFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQE 173
Query: 217 LWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
L++L+ F P +F + F+ ++D S E + L +L F+LRR K
Sbjct: 174 LYSLLSFVEPDLFSKEEVGDFVRRYQDIEKES---------ESASELHKLLQPFLLRRVK 224
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT-- 326
++ LP TE+ + LQKK Y +IL K+L A + T LQN
Sbjct: 225 AEVA----TELPRKTEVVIYHGMSALQKKYYKAILMKDLD---AFENETGKKVKLQNILS 277
Query: 327 ----------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
ASGKL +LD LL LY+ GHRVLLF+QMTQ L
Sbjct: 278 QLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAFLYSRGHRVLLFSQMTQML 337
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DILQD+++ R YSYER+DGS+R EER AI++F Q FVF++STRA
Sbjct: 338 DILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPI-------------FVFLLSTRA 384
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A
Sbjct: 385 GGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKA 444
Query: 479 ERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF-----------DPKAINN 526
KL+L++ ++ ++ +A L I+ FGL D +AI
Sbjct: 445 ASKLQLTNMIIEGGHFTLGAQKPSADADLQLSEILKFGLDKLLASEGSTVDEIDLEAILG 504
Query: 527 EESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYP 586
E D S E EQ GK N + L E D S S+
Sbjct: 505 ETKDGQWTSDALPAAE---GGSREQEEGK-------NHMYLFEGKDYSKEPSKEDRKSFE 554
Query: 587 DLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRKLEAA-- 630
L ++ +EK + S N + E +R SP ED+Q+K + A
Sbjct: 555 QLVNLQ-KTLLEKTTQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAA 613
Query: 631 ------------RRKAE-EKKLAKWEANGYQSLSVKTPVCSP 659
+ A+ +KK+A WE+N YQS + + P
Sbjct: 614 KRRRIIEEKRRQKEDAQHKKKMAWWESNNYQSFCLPSEESEP 655
>gi|395535833|ref|XP_003769925.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Sarcophilus harrisii]
Length = 887
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 224/545 (41%), Positives = 299/545 (54%), Gaps = 84/545 (15%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D +G+T L+P+Q+ G++WLI+R+ L LLGDEMGLGKT Q I+ L Y S
Sbjct: 26 DLRRWGLTGIRLRPYQLAGVNWLIQRFQLQHGCLLGDEMGLGKTCQTIALLIYFTGSLKK 85
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L Y+G++E+R +++ + +
Sbjct: 86 KGPFLILCPLSVLSNWKEEMERFAPGLSCKVYIGDKEERARLQQELKKDA---------- 135
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLL+TY++ L D FL W ++DEA RLKN SS+LY L E + LL+
Sbjct: 136 ---FHVLLSTYELCLKDAAFLKTFSWNILVVDEAHRLKNQSSLLYRTLSE-ISVDFSLLL 191
Query: 206 TGTPIQNNLSELWALMHFCMPSVF--GTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQNNL EL++L+ F PS+F L F+ +++ + + T L
Sbjct: 192 TGTPIQNNLQELYSLLSFVEPSLFTKNQLGDFIQYYQNIEKEADSA---------TELHQ 242
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ T LQKK Y +IL K+L A +
Sbjct: 243 LLQPFLLRRVKAEVAA----ELPKKTEVVLYHGMTALQKKYYKAILMKDLD---AFENEV 295
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL++LD LL LY HR
Sbjct: 296 AKKVKLQNILSQLRKCVGHPYLFEGVEPEPFEIGDHLIEASGKLLLLDKLLSFLYTRDHR 355
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMT LDILQD+L+ R YSYERLDGS+R EERF AI++F G
Sbjct: 356 VLLFSQMTHMLDILQDYLDYRGYSYERLDGSVRGEERFLAIKNF-------------GQQ 402
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++ST+AGG+G+NL AADTVIF + D+NPQ D QA+ RAHRIGQ V I L+
Sbjct: 403 PIFVFLLSTKAGGIGMNLTAADTVIFVDSDFNPQNDLQAIARAHRIGQKKSVKVIRLIGR 462
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
TVEE+I R+A KLRL++ V+ + V++ +A L I+ FGL LF +
Sbjct: 463 DTVEEIIYRKAMSKLRLTNAVIEGGHLTLGVQKSSAASELQLSEILKFGLDKLFSSEGST 522
Query: 526 NEESD 530
EE D
Sbjct: 523 LEELD 527
>gi|344306683|ref|XP_003422015.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Loxodonta africana]
Length = 924
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 206/498 (41%), Positives = 281/498 (56%), Gaps = 81/498 (16%)
Query: 31 FGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+G+T +L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL GPF
Sbjct: 41 WGLTGIQLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPF 100
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
L+LCPLSV W EM +F P L Y G++E+R ++++ + K++S F
Sbjct: 101 LILCPLSVLGNWKEEMERFAPGLPCAVYAGDKEERTHLQQDL----KQES--------CF 148
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+TGTP
Sbjct: 149 HVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFTLLLTGTP 207
Query: 210 IQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSA 267
IQN+L EL++L+ F P +F + F+ ++D S E + L +L
Sbjct: 208 IQNSLQELYSLLSFVEPDIFSKEQVEDFVQRYQDIEKQS---------ESASELHKLLQP 258
Query: 268 FMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQ 321
F+LRR K + LP TE+ + LQK Y +IL K+L A + A
Sbjct: 259 FLLRRVKADVA----TELPKKTEVVIYHSMSALQKNYYKAILMKDLD---AFENEMAKKV 311
Query: 322 SLQNT------------------------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
LQN ASGKL +LD LL LY+ GHRVLLF
Sbjct: 312 KLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSRGHRVLLF 371
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G FV
Sbjct: 372 SQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQPIFV 418
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGGVG+NL AADTVIF++ D+NPQ D QA RAHRIGQ V I L+ TVE
Sbjct: 419 FLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIARDTVE 478
Query: 472 EVIMRRAERKLRLSHNVV 489
E++ R+A KL+L++ ++
Sbjct: 479 EIVCRKAASKLQLTNMII 496
>gi|74227041|dbj|BAE38319.1| unnamed protein product [Mus musculus]
Length = 883
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 265/746 (35%), Positives = 366/746 (49%), Gaps = 140/746 (18%)
Query: 23 QTPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKF 81
Q P D ++G+T L+ +Q+EG++WL++ + +LGDEMGLGKT Q I+ L YL
Sbjct: 26 QEP-DLQQWGLTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVG 84
Query: 82 SQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM 141
GPFLVLCPLSV W EM +F P L + Y G++E+R +++ + +++S
Sbjct: 85 RLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDL----RQESG- 139
Query: 142 SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
F VLLTTY++ L D FL W +DEA RLKN SS+L+ L E F
Sbjct: 140 -------FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSE-FSAVF 191
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVFG--TLNQFLSTFKDAVHSSSAPKRGKIKEQFT 259
RLL+TGTPIQN+L EL++L+ P +F + F+ ++D S + +
Sbjct: 192 RLLLTGTPIQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSA---------S 242
Query: 260 SLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLAL 313
L +L F+LRR K ++ LP TE+ V LQKK Y +IL K+L A
Sbjct: 243 ELHRLLQPFLLRRVKAQVA----TELPKKTEVVVYHGMSALQKKYYKAILMKDLD---AF 295
Query: 314 SSRTANHQSLQNT------------------------------ASGKLVVLDLLLKKLYN 343
+ TA LQN ASGKL +LD LL LY+
Sbjct: 296 ENETAKKVKLQNILTQLRKCVDHPYLFDGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYS 355
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
GHRVLLF+QMT LDILQD+++ R YSYER+DGS+R EER AI++F
Sbjct: 356 GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF------------ 403
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
G FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I
Sbjct: 404 -GNQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIR 462
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF--- 519
L+ TVEE++ R+A KL+L++ V+ ++ +A L I+ FGL
Sbjct: 463 LIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTPGAQKPSAEADFQLSEILKFGLDKLLSS 522
Query: 520 --------DPKAINNEESDDLRLSG---LNSMVEKVIAMRHEQVSGKAGRKFEVNPVALL 568
D K+I E D + ++ E+ S R +E N + L
Sbjct: 523 EGSSMEDIDLKSILGETKDGQWTPDALPAAAAAGGGGSLEPEEGSELESRSYE-NHMYLF 581
Query: 569 EESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR--- 618
E D S S+ L ++ +EK + N +AE +R
Sbjct: 582 EGRDYSKEPSKEDRKSFEQLVNLQ-KTLLEKTSHGGRTLRNKGSVLIPGLAEGPIKRKKI 640
Query: 619 -SPED-----KQRKLEAARRK-------------AEEKKLAKWEANGYQSLSVKTPVCS- 658
SPE+ K+R+ AA+RK KK+A WE+NGYQS + +
Sbjct: 641 LSPEELEDRRKKRQEAAAKRKRLMEEKRKEKEEAEHRKKMAWWESNGYQSFCLSSEDSEL 700
Query: 659 ---PGGDMMS--------DSGSVQFV 673
GGD S DS S+ +V
Sbjct: 701 EDLEGGDESSAELAYEDLDSTSINYV 726
>gi|281345379|gb|EFB20963.1| hypothetical protein PANDA_019836 [Ailuropoda melanoleuca]
Length = 834
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 204/491 (41%), Positives = 276/491 (56%), Gaps = 80/491 (16%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EG++WL + + +LGDEMGLGKT Q I+ YL GPFL+LCPLS
Sbjct: 4 LRSYQLEGVNWLAQCFHGQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 63
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V W EM +F P L + Y G++E+R +I++ + K++S+ F VLLTTY
Sbjct: 64 VLSNWTEEMERFAPGLSCITYAGDKEERAHIQQDL----KQESR--------FHVLLTTY 111
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L D FL PW ++DEA RLKN SS+L+ L E F LL+TGTPIQN+L E
Sbjct: 112 EICLKDSSFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSTVFSLLLTGTPIQNSLQE 170
Query: 217 LWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
L++L+ F P +F + F+ ++D S E L +L F+LRR K
Sbjct: 171 LYSLLSFVEPDLFPKEQVGDFVQHYQDIEKES---------ESGNELHKLLQPFLLRRVK 221
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT-- 326
++ LP TE+ + LQKK Y +IL K+L A + A LQN
Sbjct: 222 AEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENEMAKKVKLQNVLS 274
Query: 327 ----------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
ASGKL +LD LL LY+ GHRVLLF+QMTQ L
Sbjct: 275 QLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLYLLDKLLAFLYSRGHRVLLFSQMTQML 334
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DILQD+++ R YSYER+DGS+R EER AI++F G F+F++STRA
Sbjct: 335 DILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQPVFIFLLSTRA 381
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A
Sbjct: 382 GGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKA 441
Query: 479 ERKLRLSHNVV 489
KL+L++ ++
Sbjct: 442 ASKLQLTNTII 452
>gi|13386044|ref|NP_080815.1| chromodomain-helicase-DNA-binding protein 1-like [Mus musculus]
gi|81916841|sp|Q9CXF7.1|CHD1L_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 1-like
gi|12852350|dbj|BAB29376.1| unnamed protein product [Mus musculus]
gi|30931375|gb|AAH52385.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus]
Length = 900
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 265/749 (35%), Positives = 371/749 (49%), Gaps = 147/749 (19%)
Query: 23 QTPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKF 81
Q P D ++G+T L+ +Q+EG++WL++ + +LGDEMGLGKT Q I+ L YL
Sbjct: 26 QEP-DLQQWGLTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVG 84
Query: 82 SQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM 141
GPFLVLCPLSV W EM +F P L + Y G++E+R +++ + +++S
Sbjct: 85 RLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDL----RQESG- 139
Query: 142 SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
F VLLTTY++ L D FL W +DEA RLKN SS+L+ L E F
Sbjct: 140 -------FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSE-FSAVF 191
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVFG--TLNQFLSTFKDAVHSSSAPKRGKIKEQFT 259
RLL+TGTPIQN+L EL++L+ P +F + F+ ++D S + +
Sbjct: 192 RLLLTGTPIQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSA---------S 242
Query: 260 SLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLAL 313
L +L F+LRR K ++ LP TE+ V LQKK Y +IL K+L A
Sbjct: 243 ELHRLLQPFLLRRVKAQVA----TELPKKTEVVVYHGMSALQKKYYKAILMKDLD---AF 295
Query: 314 SSRTANHQSLQNT------------------------------ASGKLVVLDLLLKKLYN 343
+ TA LQN ASGKL +LD LL LY+
Sbjct: 296 ENETAKKVKLQNILTQLRKCVDHPYLFDGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYS 355
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
GHRVLLF+QMT LDILQD+++ R YSYER+DGS+R EER AI++F
Sbjct: 356 GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF------------ 403
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
G FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I
Sbjct: 404 -GNQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIR 462
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLFDPK 522
L+ TVEE++ R+A KL+L++ V+ ++ +A L I+ FGL K
Sbjct: 463 LIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTPGAQKPSAEADFQLSEILKFGLD----K 518
Query: 523 AINNEES--DDLRLSGL---------------NSMVEKVIAMRHEQVSGKAGRKFEVNPV 565
+++E S +D+ L + + ++ E+ S R +E N +
Sbjct: 519 LLSSEGSSMEDIDLKSILGETKDGQWTPDALPAAAAAGGGSLEPEEGSELESRSYE-NHM 577
Query: 566 ALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR 618
L E D S S+ L ++ +EK + N +AE +R
Sbjct: 578 YLFEGRDYSKEPSKEDRKSFEQLVNLQ-KTLLEKTSHGGRTLRNKGSVLIPGLAEGPIKR 636
Query: 619 ----SPED-----KQRKLEAARRK-------------AEEKKLAKWEANGYQSLSVKTPV 656
SPE+ K+R+ AA+RK KK+A WE+NGYQS + +
Sbjct: 637 KKILSPEELEDRRKKRQEAAAKRKRLMEEKRKEKEEAEHRKKMAWWESNGYQSFCLSSED 696
Query: 657 CS----PGGDMMS--------DSGSVQFV 673
GGD S DS S+ +V
Sbjct: 697 SELEDLEGGDESSAELAYEDLDSTSINYV 725
>gi|348586658|ref|XP_003479085.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Cavia
porcellus]
Length = 1090
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 205/499 (41%), Positives = 282/499 (56%), Gaps = 81/499 (16%)
Query: 30 EFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGP 88
++G+T L+P+Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL GP
Sbjct: 231 QWGLTGIHLRPYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGP 290
Query: 89 FLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP 148
FL+LCPLSV W EM + P L + Y G++E+R ++++ + E P
Sbjct: 291 FLILCPLSVLSNWKEEMQRCAPGLSCVTYAGDKEERAHLQQDLTEDS------------P 338
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY++ L D FL W ++DEA RLKN SS+L+ L E F + LL+TGT
Sbjct: 339 FHVLLTTYEICLKDALFLKSFSWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGT 397
Query: 209 PIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
P+QN+L EL++L+ F P +F + F+ ++D S + + L +L
Sbjct: 398 PVQNSLQELYSLLSFVEPDLFCKEQVEDFVHRYQDIEKESKSA---------SELHKLLQ 448
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANH 320
F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + A
Sbjct: 449 PFLLRRVKAEVAT----ELPKKTEVVIYHGMSPLQKKYYKAILMKDLD---AFENEMAKK 501
Query: 321 QSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHRVLL 350
LQN ASGKL +LD LL LY+ GHRVLL
Sbjct: 502 VKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLYLLDKLLAFLYSRGHRVLL 561
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G F
Sbjct: 562 FSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQPIF 608
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF++STRAGGVG+NL+AADTVIF + D+NPQ D QA+ RAHRIGQ V I L+ TV
Sbjct: 609 VFLLSTRAGGVGMNLMAADTVIFIDSDFNPQNDLQAVARAHRIGQNKSVKVIRLIGRDTV 668
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE++ RRA KL+L++ ++
Sbjct: 669 EEIVYRRAASKLQLTNMII 687
>gi|417413069|gb|JAA52881.1| Putative chromatin remodeling complex swi/snf component swi2,
partial [Desmodus rotundus]
Length = 901
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 205/502 (40%), Positives = 278/502 (55%), Gaps = 81/502 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL + +LGDEMGLGKT Q I+ YL
Sbjct: 38 DLRQWGLTGIHLRSYQLEGVNWLAHCFHRQNGCILGDEMGLGKTCQTIALFIYLAGRLND 97
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV + W EM +F P+L + Y G++E+R +++ + +
Sbjct: 98 EGPFLILCPLSVLNNWKEEMERFAPRLPCITYAGDKEERAQLQQDLKQKPH--------- 148
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL W ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 149 ---FHVLLTTYEICLKDTSFLKSFHWSILVVDEAHRLKNQSSLLHKTLSE-FSVVFNLLL 204
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P VF + F+ ++D S E + L
Sbjct: 205 TGTPIQNSLQELYSLLSFVEPDVFSKEQVEDFVQRYQDIEKES---------ESASELHK 255
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K + LP TE+ + LQKK Y +IL K+L A +
Sbjct: 256 LLQPFLLRRVKADVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLG---AFENEM 308
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 309 AKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGEHLIEASGKLHLLDKLLAYLYSRGHR 368
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER+ AI++F G
Sbjct: 369 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERYLAIKNF-------------GQQ 415
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F+F++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 416 PIFIFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAASRAHRIGQNKSVKVIRLIGR 475
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
TVEE+I R+A KL+L+ ++
Sbjct: 476 DTVEEIICRKAASKLQLTSTII 497
>gi|148706991|gb|EDL38938.1| chromodomain helicase DNA binding protein 1-like [Mus musculus]
Length = 900
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 265/749 (35%), Positives = 371/749 (49%), Gaps = 147/749 (19%)
Query: 23 QTPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKF 81
Q P D ++G+T L+ +Q+EG++WL++ + +LGDEMGLGKT Q I+ L YL
Sbjct: 26 QEP-DLQQWGLTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVG 84
Query: 82 SQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM 141
GPFLVLCPLSV W EM +F P L + Y G++E+R +++ + +++S
Sbjct: 85 RLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDL----RQESG- 139
Query: 142 SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
F VLLTTY++ L D FL W +DEA RLKN SS+L+ L E F
Sbjct: 140 -------FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSE-FSAVF 191
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVFG--TLNQFLSTFKDAVHSSSAPKRGKIKEQFT 259
RLL+TGTPIQN+L EL++L+ P +F + F+ ++D S + +
Sbjct: 192 RLLLTGTPIQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSG---------S 242
Query: 260 SLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLAL 313
L +L F+LRR K ++ LP TE+ V LQKK Y +IL K+L A
Sbjct: 243 ELHRLLQPFLLRRVKAQVA----TELPKKTEVVVYHGMSALQKKYYKAILMKDLD---AF 295
Query: 314 SSRTANHQSLQNT------------------------------ASGKLVVLDLLLKKLYN 343
+ TA LQN ASGKL +LD LL LY+
Sbjct: 296 ENETAKKVKLQNILTQLRKCVDHPYLFDGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYS 355
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
GHRVLLF+QMT LDILQD+++ R YSYER+DGS+R EER AI++F
Sbjct: 356 GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF------------ 403
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
G FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I
Sbjct: 404 -GNQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIR 462
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLFDPK 522
L+ TVEE++ R+A KL+L++ V+ ++ +A L I+ FGL K
Sbjct: 463 LIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTPGAQKPSAEADFQLSEILKFGLD----K 518
Query: 523 AINNEES--DDLRLSGL---------------NSMVEKVIAMRHEQVSGKAGRKFEVNPV 565
+++E S +D+ L + + ++ E+ S R +E N +
Sbjct: 519 LLSSEGSSMEDIDLKSILGETKDGQWTPDALPAAAAAGGGSLEPEEGSELESRSYE-NHM 577
Query: 566 ALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR 618
L E D S S+ L ++ +EK + N +AE +R
Sbjct: 578 YLFEGRDYSKEPSKEDRKSFEQLVNLQ-KTLLEKTSHGGRTLRNKGSVLIPGLAEGPIKR 636
Query: 619 ----SPED-----KQRKLEAARRK-------------AEEKKLAKWEANGYQSLSVKTPV 656
SPE+ K+R+ AA+RK KK+A WE+NGYQS + +
Sbjct: 637 KKILSPEELEDRRKKRQEAAAKRKRLMEEKRKEKEEAEHRKKMAWWESNGYQSFCLSSED 696
Query: 657 CS----PGGDMMS--------DSGSVQFV 673
GGD S DS S+ +V
Sbjct: 697 SELEDLEGGDESSAELAYEDLDSTSINYV 725
>gi|35505451|gb|AAH57567.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus]
gi|38571574|gb|AAH62966.1| Chromodomain helicase DNA binding protein 1-like [Mus musculus]
Length = 900
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 264/749 (35%), Positives = 371/749 (49%), Gaps = 147/749 (19%)
Query: 23 QTPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKF 81
Q P D ++G+T L+ +Q+EG++WL++ + +LGDEMGLGKT Q I+ L YL
Sbjct: 26 QEP-DLQQWGLTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVG 84
Query: 82 SQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM 141
GPFLVLCPLSV W EM +F P L + Y G++E+R +++ + +++S
Sbjct: 85 RLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDL----RQESG- 139
Query: 142 SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
F VLLTTY++ L D FL W +DEA RLKN SS+L+ L E F
Sbjct: 140 -------FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSE-FSAVF 191
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVFG--TLNQFLSTFKDAVHSSSAPKRGKIKEQFT 259
RLL+TGTPIQN+L EL++L+ P +F + F+ ++D S + +
Sbjct: 192 RLLLTGTPIQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSA---------S 242
Query: 260 SLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLAL 313
L +L F+LRR K ++ LP TE+ V LQKK Y +IL K+L A
Sbjct: 243 ELHRLLQPFLLRRVKAQVA----TELPKKTEVVVYHGMSALQKKYYKAILMKDLD---AF 295
Query: 314 SSRTANHQSLQNT------------------------------ASGKLVVLDLLLKKLYN 343
+ T+ LQN ASGKL +LD LL LY+
Sbjct: 296 ENETSKKVKLQNILTQLRKCVDHPYLFDGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYS 355
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
GHRVLLF+QMT LDILQD+++ R YSYER+DGS+R EER AI++F
Sbjct: 356 GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF------------ 403
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
G FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I
Sbjct: 404 -GNQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIR 462
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLFDPK 522
L+ TVEE++ R+A KL+L++ V+ ++ +A L I+ FGL K
Sbjct: 463 LIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTPGAQKPSAEADFQLSEILKFGLD----K 518
Query: 523 AINNEES--DDLRLSGL---------------NSMVEKVIAMRHEQVSGKAGRKFEVNPV 565
+++E S +D+ L + + ++ E+ S R +E N +
Sbjct: 519 LLSSEGSSMEDIDLKSILGETKDGQWTPDALPAAAAAGGGSLEPEEGSELESRSYE-NHM 577
Query: 566 ALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR 618
L E D S S+ L ++ +EK + N +AE +R
Sbjct: 578 YLFEGRDYSKEPSKEDRKSFEQLVNLQ-KTLLEKTSHGGRTLRNKGSVLIPGLAEGPIKR 636
Query: 619 ----SPED-----KQRKLEAARRK-------------AEEKKLAKWEANGYQSLSVKTPV 656
SPE+ K+R+ AA+RK KK+A WE+NGYQS + +
Sbjct: 637 KKILSPEELEDRRKKRQEAAAKRKRLMEEKRKEKEEAEHRKKMAWWESNGYQSFCLSSED 696
Query: 657 CS----PGGDMMS--------DSGSVQFV 673
GGD S DS S+ +V
Sbjct: 697 SELEDLEGGDESSAELAYEDLDSTSINYV 725
>gi|221055808|ref|XP_002259042.1| snf2 family n-terminal domain [Plasmodium knowlesi strain H]
gi|193809113|emb|CAQ39815.1| snf2 family n-terminal domain, putative [Plasmodium knowlesi strain
H]
Length = 1382
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 196/511 (38%), Positives = 288/511 (56%), Gaps = 68/511 (13%)
Query: 13 IIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQA 72
++ D +E D +T + + +KP+Q+EGL+WL + Y +N +L DEMGLGKTLQ
Sbjct: 279 LLKDANEED-ETFIMKQPANINGCMKPYQIEGLNWLYQLYRHKINGILADEMGLGKTLQT 337
Query: 73 ISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY 132
IS L YL+F++ +++CP S D W E+ K+ +++ +Y G +E+RR + +
Sbjct: 338 ISLLCYLRFNKNIKRKSIIICPRSTLDNWYQEIKKWCTEMKAFKYYGNKEERRELNK--- 394
Query: 133 EHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNV 192
NV +DVLLTTY++V+ D+ L I W + +IDEA R+KN SVL
Sbjct: 395 ----------NVLHTDYDVLLTTYEIVIKDKNALFDIDWFFLVIDEAHRIKNDKSVLSTS 444
Query: 193 LREHFLMP-RRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKR 251
+R FL RLL+TGTP+ NNL ELW+L++F MP +F +F + F + SS+ K+
Sbjct: 445 VR--FLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISSNDNKQ 502
Query: 252 GKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRK 305
+I T L IL FMLRR K ++ +C LPP EI V LQKK+Y+ IL K
Sbjct: 503 SEI---ITQLHTILKPFMLRRLKMEVEQC----LPPKREIYVFVGMSKLQKKLYSDILSK 555
Query: 306 ELPKLLALSS-------------RTANHQSLQN--------------TASGKLVVLDLLL 338
+ + A++ + NH L + SGK+ +LD LL
Sbjct: 556 NIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLIETSGKMSLLDKLL 615
Query: 339 KKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIE 398
+L RVLLF+QMT+ LDI+ D+ +KY Y R+DGS +ER I F+ ++
Sbjct: 616 PRLKKENSRVLLFSQMTRVLDIIDDYCRWKKYEYLRIDGSTVGDERQIRINQFNEPNS-- 673
Query: 399 RLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
F+F++STRAGG+G+NL AD VI ++ D+NPQ+D QA+ RAHRIGQ
Sbjct: 674 ---------KYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKK 724
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
V+ VT++TVEE I+ RA +KL+L ++
Sbjct: 725 VIVYRFVTQNTVEEKIVERAAKKLKLDSLII 755
>gi|395842075|ref|XP_003793845.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
1 [Otolemur garnettii]
Length = 898
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 253/713 (35%), Positives = 352/713 (49%), Gaps = 133/713 (18%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL + + +LGDEMGLGKT Q I+ YL
Sbjct: 37 DLQQWGLTGIHLRSYQLEGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 96
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E R ++R + K++S
Sbjct: 97 EGPFLILCPLSVLSNWKEEMERFAPGLSCITYAGDKEARACLQRDL----KQESH----- 147
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F LLTTY++ L D FL PW ++DEA RLKN +S+L+ L E F + LL+
Sbjct: 148 ---FHALLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQNSLLHKTLSE-FSVVFSLLL 203
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQNNL EL++L+ F P +F + F+ ++D S E + L
Sbjct: 204 TGTPIQNNLQELYSLLSFVEPDLFPKEQVEDFVHRYQDIEKES---------ESASELHR 254
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A +
Sbjct: 255 LLQPFLLRRVKAEVA----TELPRKTEVVIYHGMSALQKKYYKAILMKDLD---AFENEM 307
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL L+ GHR
Sbjct: 308 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLHLLDKLLGFLHPRGHR 367
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 368 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 414
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F+F++STRAGGVG+NL AADTVIF++ D+NPQ D Q RAHRIGQ V I L+ +
Sbjct: 415 PVFIFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQGAARAHRIGQSKSVKVIRLIGQ 474
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF------- 519
TVEE++ R+A KL+L+ ++ ++ +A L I+ FGL
Sbjct: 475 DTVEEIVYRKAASKLQLTSVIIEGGHFTLGAQKPSADADLQLSEILKFGLDKLLSSDGST 534
Query: 520 ----DPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLM 575
D ++I E D +S E EQ GK N + L E D
Sbjct: 535 MDEVDLESILGETKDGQWVSDALPAAE---GGSREQEEGK-------NHMYLFEGKDYSK 584
Query: 576 HESFASATSYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SPED-- 622
S S+ L + +EK + S +AE +R SPE+
Sbjct: 585 EPSKEDRKSFEQLVNLQ-KILLEKTSQEGRSLRKKGSVLIPGLAEGSTKRKRILSPEELE 643
Query: 623 ---KQRKLEAARRK-------------AEEKKLAKWEANGYQSLSVKTPVCSP 659
K+R+ AA+RK +KK+A WE+N YQS S+ + +P
Sbjct: 644 DRHKKRQAAAAKRKRLIEEKKREKEEAEHKKKMAWWESNNYQSFSLPSEESNP 696
>gi|66809969|ref|XP_638708.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
gi|60467321|gb|EAL65353.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
Length = 1917
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 207/506 (40%), Positives = 286/506 (56%), Gaps = 68/506 (13%)
Query: 22 GQTPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLK 80
G T +D ++A L+ +Q+EGL+WL+ ++ NV+L DEMGLGKT+Q ISFLSYL
Sbjct: 739 GFTKLDTQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLF 798
Query: 81 FSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQ 140
Q GPFLV+ PLS + W E AK+ P + V+ Y G + R IR +YE +
Sbjct: 799 NEQDIKGPFLVVVPLSTIENWQREFAKWAPAMNVIVYTGTGQSRDIIR--LYEFY--TTN 854
Query: 141 MSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP 200
L F+VLLTTYD +L D+ L I W + +DEA RLKN SVL+ VL+ +
Sbjct: 855 RLGKKKLNFNVLLTTYDFILKDKNTLGTIKWEFLAVDEAHRLKNSESVLHEVLK-LYNTT 913
Query: 201 RRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTS 260
RLL+TGTP+QN+L ELW L++F MP+ F +L F + D K +Q
Sbjct: 914 NRLLVTGTPLQNSLKELWNLLNFLMPNKFTSLKDFQDQYSDL----------KENDQIAQ 963
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKL---- 310
L +L +LRR K+ + + LPP TE ++ +QKK Y IL K +L
Sbjct: 964 LHSVLKPHLLRRIKKDVEKS----LPPKTERILRVDLSNVQKKYYKWILTKNFQELNKGK 1019
Query: 311 ---------LALSSRTANHQSL-QNT-----------------ASGKLVVLDLLLKKLYN 343
+ +T NH L QN ASGKLV+LD LL +L
Sbjct: 1020 GEKTTLLNIMTELKKTCNHPYLYQNARDECELGAKDLLDSMIRASGKLVLLDKLLIRLKE 1079
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
+GHRVL+F+QM + LDIL D+L+ R + ++RLDGS+ E+R A+ F+
Sbjct: 1080 TGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMSREKRSQAMDRFN----------- 1128
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
A + F F++ST+AGG+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ NHV
Sbjct: 1129 AVDSPDFCFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHVNIYR 1188
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVV 489
LV++ +VEE I+ RA++K+ L H V+
Sbjct: 1189 LVSKSSVEEDILERAKQKMVLDHLVI 1214
>gi|126313652|ref|XP_001368284.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Monodelphis domestica]
Length = 982
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 208/502 (41%), Positives = 278/502 (55%), Gaps = 81/502 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+ G++WL++R+ L +LGDEMGLGKT Q I+ L YL S
Sbjct: 120 DLRKWGLTGIHLRSYQLAGVNWLVQRFQLQHGCILGDEMGLGKTCQTIALLIYLTGSLKK 179
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPF++LCPLSV W EM +F P L Y G++E+R H+++ +M
Sbjct: 180 KGPFMILCPLSVLSNWKEEMERFAPGLSCKVYTGDKEER--------AHLQQDLRMDA-- 229
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLL+TY++ L D FL W ++DEA RLKN SS+L+ L E + LL+
Sbjct: 230 --SFHVLLSTYEICLKDAAFLKTFSWSVLVVDEAHRLKNQSSLLHKTLSE-ISVDFSLLL 286
Query: 206 TGTPIQNNLSELWALMHFCMPSVF--GTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F S+F L F+ F+D + + L
Sbjct: 287 TGTPIQNSLQELYSLLSFVESSLFPKDQLEDFIQCFRDVEKETDSA---------AELHQ 337
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y ++L K+L A + T
Sbjct: 338 LLKPFLLRRVKAEVAA----ELPRKTEVVLYHGMSALQKKYYKALLMKDLD---AFENET 390
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY HR
Sbjct: 391 AKKVKLQNILSQLRKCVGHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLSFLYTRHHR 450
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMT LDILQD+++ R YSYERLDGS+R EER AI++F G
Sbjct: 451 VLLFSQMTHMLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNF-------------GQQ 497
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++ST+AGGVG+NL AADTVIF + D+NPQ D QA+ RAHRIGQ V I L+
Sbjct: 498 PIFVFLLSTKAGGVGMNLTAADTVIFVDSDFNPQNDLQAIARAHRIGQKKSVKIIRLIGR 557
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
TVEEVI RRA KLRL+ ++
Sbjct: 558 DTVEEVIYRRAASKLRLTSAII 579
>gi|443730198|gb|ELU15824.1| hypothetical protein CAPTEDRAFT_142589, partial [Capitella teleta]
Length = 850
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 199/492 (40%), Positives = 283/492 (57%), Gaps = 80/492 (16%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L HQVEG+ WL R L +LGDEMGLGKT Q IS L YLK S S GP L+L PL
Sbjct: 2 QLHDHQVEGVRWLAERQLRCHGCILGDEMGLGKTCQTISLLLYLKGSGQSNGPHLILSPL 61
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQR----RNIRRTMYEHVKEQSQMSNVSPLPFDV 151
SV W E +F P L +++Y+G ++ R IR ++Y +
Sbjct: 62 SVLQNWADEFERFAPDLTIVKYIGAKDDRPALQEKIRNSLY----------------LNA 105
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
++TTY++ L D+ FL PW +IDE RLKN S+LY +L + F RLL+TGTP+Q
Sbjct: 106 VITTYEMALKDESFLRSFPWFCLVIDEGHRLKNSESLLYKILVD-FEAEFRLLLTGTPVQ 164
Query: 212 NNLSELWALMHFCMPSVF--GTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
NNLSEL++L+ F +F + F+ +++ S E+ + L IL F+
Sbjct: 165 NNLSELYSLLSFVAHKIFRPNLMEVFIQKYRNLSEGS---------EEASKLHDILRPFL 215
Query: 270 LRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKE-----------LPKLLA 312
LRR K ++ LP +E+ + LQKK Y +IL ++ L ++
Sbjct: 216 LRRLKTDVLHN----LPVKSEVVLYHGLSALQKKQYKAILTRDASAFESNTPVSLMNIVV 271
Query: 313 LSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
++ +H L + T+SGKL++LD LL L +GH+VL+F+QMT++
Sbjct: 272 QLRKSVSHPYLFDAGVEPEPFELGEHLVTSSGKLMLLDKLLSFLKVNGHKVLVFSQMTRS 331
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LD++QD+L LR Y+YERLDGS+R EER A+R F+ F+F++ST+
Sbjct: 332 LDVIQDYLALRGYTYERLDGSVRGEERHLAVRSFNQDKG------------TFIFLLSTK 379
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGGVGLNLV ADTVIF++ D+NPQ D QA RAHRIGQ +V I LV ++T+EE+I+ R
Sbjct: 380 AGGVGLNLVGADTVIFFDSDFNPQNDLQAAARAHRIGQKRNVKVIRLVGKNTLEEIIIER 439
Query: 478 AERKLRLSHNVV 489
A +KL+LSH+V+
Sbjct: 440 ARKKLQLSHSVI 451
>gi|281203153|gb|EFA77354.1| chromo domain-containing protein [Polysphondylium pallidum PN500]
Length = 1842
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 202/490 (41%), Positives = 283/490 (57%), Gaps = 65/490 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+EGL+WL+ + NV+L DEMGLGKT+Q ISF+SYL Q GPFLV+ P
Sbjct: 709 GKLRDYQMEGLNWLVHSWKNNTNVILADEMGLGKTIQTISFISYLFNVQNLSGPFLVVVP 768
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS + W E K+ PK+ ++ Y G R IR+ + Q + F+VLLT
Sbjct: 769 LSTIENWHREFTKWAPKMNLIVYTGSSASRDIIRQFEFY----QPTRFGKKKISFNVLLT 824
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TYD +L D+ +L I W Y +DEA RLKN S+L+ VL+ +F RLL+TGTP+QN+L
Sbjct: 825 TYDFILKDKNYLGAIKWEYLAVDEAHRLKNNESMLHEVLK-YFHTSNRLLVTGTPLQNSL 883
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELW L++F MP+ F +L++F + D K K+Q L +L +LRR K
Sbjct: 884 KELWNLLNFLMPNKFHSLDEFQDQYADL----------KEKDQIAELHNVLKPHLLRRIK 933
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRK---ELPK-----------LLALS 314
+++ + LP TE ++ QKK Y IL K EL K ++A
Sbjct: 934 KEVEKS----LPAKTERILRVDLSPTQKKYYRWILSKNFHELNKGVKGEKTTLLNIVAEL 989
Query: 315 SRTANHQSL-QNT--------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+T NH L +N ASGKL++LD LL +L +GHRVL+F+QM + LD
Sbjct: 990 KKTCNHPYLFENAEDLNAENPLDAMVKASGKLILLDKLLVRLKETGHRVLIFSQMVRMLD 1049
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL D+L+ R + ++RLDGS E+R A+ F+ A G+ F F++STRAG
Sbjct: 1050 ILADYLKGRGFLFQRLDGSTSREKRSQAMDRFN-----------AEGSPDFAFLLSTRAG 1098
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LV++ T+EE I+ RA+
Sbjct: 1099 GLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNTVNIYRLVSKSTIEEEILERAK 1158
Query: 480 RKLRLSHNVV 489
+K+ L H V+
Sbjct: 1159 QKMVLDHLVI 1168
>gi|448522400|ref|XP_003868680.1| Isw2 protein [Candida orthopsilosis Co 90-125]
gi|380353020|emb|CCG25776.1| Isw2 protein [Candida orthopsilosis]
Length = 1047
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 196/515 (38%), Positives = 295/515 (57%), Gaps = 68/515 (13%)
Query: 15 HDNDERDGQTP-VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAI 73
H +DE + T ++ + L+ +Q++GL+WLI Y ++ +L DEMGLGKTLQ I
Sbjct: 115 HQDDEENQHTVFTESPSYIKEGTLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTI 174
Query: 74 SFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE 133
SFL YL++ + GPF+++ P S D W E AK+TP + V+ G++E R NI
Sbjct: 175 SFLGYLRYVKNIDGPFIIIVPKSTLDNWRREFAKWTPDVSVVVLQGDKESRANI------ 228
Query: 134 HVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
+K++ ++ FDVL+T++++VL ++ L + W Y ++DEA R+KN S L ++
Sbjct: 229 -IKDRLYTAD-----FDVLITSFEMVLREKSALKKFKWEYIVVDEAHRIKNEQSSLSQII 282
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGK 253
R F RLL+TGTP+QNNL ELWAL++F +P VFG QF TF D +++ K+ K
Sbjct: 283 R-LFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEQFDDTF-DQQNNNEQDKKTK 340
Query: 254 IKEQ---FTSLKGILSAFMLRRTKQKLVECGHLMLPPL-----TEITVLQKKVYASILRK 305
+EQ L +LS F+LRR K + + +LP + T +T +Q Y ++L K
Sbjct: 341 AEEQDKVIQELHQLLSPFLLRRVKSDVEKS---LLPKIETNVYTGMTDMQVSWYKNLLEK 397
Query: 306 EL-------------PKLLALS---SRTANHQSLQNTA---------------SGKLVVL 334
++ +LL + + NH L + A SGK+++L
Sbjct: 398 DIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSGKMIIL 457
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D +LKK G RVL+F+QM++ LDIL+D+ R+Y Y R+DGS E+R AI ++
Sbjct: 458 DKMLKKFKQEGSRVLIFSQMSRVLDILEDYCYFREYEYCRIDGSTAHEDRIEAIDEYN-- 515
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
A +D F+F+++TRAGG+G+NL +AD VI Y+ DWNPQ D QA+ RAHRIG
Sbjct: 516 ---------APDSDKFIFLLTTRAGGLGINLTSADVVILYDSDWNPQADLQAMDRAHRIG 566
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
Q V VTE+ +EE ++ RA +KLRL V+
Sbjct: 567 QKKQVKVYRFVTENAIEEKVLERAAQKLRLDQLVI 601
>gi|118083490|ref|XP_416560.2| PREDICTED: chromodomain helicase DNA binding protein 1-like [Gallus
gallus]
Length = 885
Score = 342 bits (877), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 210/502 (41%), Positives = 285/502 (56%), Gaps = 81/502 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D + +G+T +L+P+Q++G++WL++ Y + +LGDEMGLGKT Q IS L YL +
Sbjct: 25 DVSRWGLTGIKLRPYQLDGVNWLVQCYQVQHGCILGDEMGLGKTCQTISLLLYLTKKLTN 84
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
L+LCPLSV W E+ +F P L + YVG +E+R ++ +++KEQS
Sbjct: 85 KERSLILCPLSVLSNWKEELERFAPGLSFVTYVGNKEERYKLQ----QNLKEQSH----- 135
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL W ++DEA RLKN +S+LY L E + LL+
Sbjct: 136 ---FRVLLTTYEICLKDAAFLKFFDWAALVVDEAHRLKNQNSLLYETLTE-LPVGFSLLL 191
Query: 206 TGTPIQNNLSELWALMHFCMPSVF--GTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + +F+ ++ AV S P + L
Sbjct: 192 TGTPIQNSLQELYSLLSFIEPDIFPRKQVKEFVEYYQ-AVEKESEPAK--------ELHN 242
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP E+ + LQ+K Y +IL K+L A T
Sbjct: 243 LLQPFLLRRVKSEVTA----DLPKKVEVVLYHGMSALQRKYYKAILTKDLD---AFEGGT 295
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
LQN ASGKL +LD LL LY+ GHR
Sbjct: 296 GRKVMLQNVLIQLRKCVAHPYLFNGVEPEPFEIGDHIVEASGKLCLLDKLLSFLYDGGHR 355
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMT+ LDILQD+++ R YSYERLDGS+R EER AI++F G
Sbjct: 356 VLLFSQMTKLLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNF-------------GQQ 402
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA+ RAHRIGQ V I L+
Sbjct: 403 PIFVFLLSTRAGGVGMNLTAADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVKIIRLIGR 462
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
TVEE+I RRA KLRL++ +V
Sbjct: 463 DTVEEIIYRRAASKLRLTNAIV 484
>gi|355678656|gb|AER96175.1| chromodomain helicase DNA binding protein 1-like protein [Mustela
putorius furo]
Length = 851
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 252/703 (35%), Positives = 351/703 (49%), Gaps = 134/703 (19%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EG++WL + + +LGDEMGLGKT Q I+ YL GPFL+LCPLS
Sbjct: 3 LRSYQLEGVNWLAQCFHGQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 62
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V W EM +F P L + Y G++E+R ++++ + K++S+ F VLLTTY
Sbjct: 63 VLSNWREEMERFAPGLSCIMYAGDKEERAHLQQDL----KQESR--------FHVLLTTY 110
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L E
Sbjct: 111 EICLKDSSFLKSFPWSVLVVDEAHRLKNQSSLLHKTLLE-FSVVFSLLLTGTPIQNSLQE 169
Query: 217 LWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
L++L+ F P +F + F+ ++D S + + L +L F+LRR K
Sbjct: 170 LYSLLSFVEPDLFPKEQVGDFVQHYQDIEKESESAR---------ELHKLLQPFLLRRVK 220
Query: 275 QKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALSSRTANHQSLQNT-- 326
++ LP TE+ + LQK+ Y +IL K+L A + A LQN
Sbjct: 221 AEVA----TELPKKTEVVLYHGMSALQKRYYKAILMKDLD---AFENEMAKKVKLQNVLS 273
Query: 327 ----------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
ASGKL +LD LL LY+ GHRVLLF+QMT+ L
Sbjct: 274 QLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSRGHRVLLFSQMTRML 333
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DILQD+++ R YSYER+DGS+R EER AI++F G F+F++STRA
Sbjct: 334 DILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQPVFIFLLSTRA 380
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A
Sbjct: 381 GGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKIIRLIGRDTVEEIVCRKA 440
Query: 479 ERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF-----------DPKAINN 526
KL+L++ V+ ++ A L I+ FGL D + I
Sbjct: 441 ASKLQLTNAVIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLSSEGSTMDEIDLETILG 500
Query: 527 EESDDLRLS-GLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
E D +S L +M +V EQ GK N + L E D S S+
Sbjct: 501 ETKDGQWISEALPTMEGRV----REQEEGK-------NHMYLFEGKDYSKEPSKEDRKSF 549
Query: 586 PDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SPED-----KQRKLEA 629
L + +EK + N +AE +R SPE+ K+R+ A
Sbjct: 550 EQLVNLQ-KKHLEKTTQEGRLLRNKSSVLLPGLAEGSTKRKRILSPEELEDRRKKRQAAA 608
Query: 630 ARRK-------------AEEKKLAKWEANGYQSLSVKTPVCSP 659
A+RK EKK+A WE+N YQS + + P
Sbjct: 609 AKRKRLMEEKKRKKEEAEHEKKMAWWESNNYQSFCLPSEESEP 651
>gi|196010573|ref|XP_002115151.1| hypothetical protein TRIADDRAFT_28849 [Trichoplax adhaerens]
gi|190582534|gb|EDV22607.1| hypothetical protein TRIADDRAFT_28849 [Trichoplax adhaerens]
Length = 849
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/488 (40%), Positives = 284/488 (58%), Gaps = 72/488 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+ HQVEG+ W+ +R+L G +LGDEMGLGKT Q + + FL+L PL
Sbjct: 8 KLREHQVEGVKWINKRFLDGHGCILGDEMGLGKTAQVVMLNVCNPNNADRKCQFLILSPL 67
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
SV + W E+ +F P L + Y G +E R +R +N+ LP+ VL+TT
Sbjct: 68 SVLNNWQVELTRFGPSLTGIVYAGSKEDREQLR-------------TNIGQLPYHVLMTT 114
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++ + D FL + W I+DEAQRLKN +S+LY +L++ F + LL+TGTP+QNNL+
Sbjct: 115 YEICMKDAVFLEEFKWKVLIVDEAQRLKNSNSMLYQILKQ-FRIQFSLLLTGTPVQNNLN 173
Query: 216 ELWALMHFCMPSVFGTLNQ--FLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
EL++L+ F P F + F+ + + + K L+ I+ ++LRR
Sbjct: 174 ELYSLLSFIEPKKFRLEDAEYFIDKYATITEMTGSSLNDK-------LRSIIKPYILRRV 226
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTA--------- 318
K+ ++ L LP +E+TV LQ+K+Y ++L++ + L +S+T+
Sbjct: 227 KKGVL----LDLPLKSEMTVDCGLSHLQRKLYKALLQRNIESLTNEASKTSLMNMLIQLR 282
Query: 319 ---NHQSLQN--------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L N ASGKL +LD LL L + GH+VL+F+QMT+ LDIL
Sbjct: 283 KCVNHPYLFNGIEPEPFEIGDHLINASGKLFLLDKLLPYLKSRGHKVLIFSQMTRMLDIL 342
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
QD+L + Y+YERLDGS+R EER+ AI++F+ D FVF++ST+AGGV
Sbjct: 343 QDYLSYKDYNYERLDGSVRGEERYLAIQNFT-------------DPDVFVFILSTKAGGV 389
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
GLNLVAADTVIF++ D+NPQ D QA R HRIGQ V I V + TVEE+I++RAE K
Sbjct: 390 GLNLVAADTVIFFDSDFNPQNDIQAAARCHRIGQTKPVKIIRFVAQSTVEEIILKRAEAK 449
Query: 482 LRLSHNVV 489
L+L+ V+
Sbjct: 450 LKLTDAVI 457
>gi|158293462|ref|XP_314800.4| AGAP008698-PA [Anopheles gambiae str. PEST]
gi|157016718|gb|EAA10171.4| AGAP008698-PA [Anopheles gambiae str. PEST]
Length = 2083
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/538 (38%), Positives = 298/538 (55%), Gaps = 74/538 (13%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+ +Q++GL+WLI + +V+L DEMGLGKT+Q I FL YL SQ GPFL + PL
Sbjct: 604 KLRDYQMDGLNWLILTWCKDNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPL 663
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P+L V+ Y+G+ + R IR+ YE E ++ L F+ +LTT
Sbjct: 664 STMPAWQREFGIWAPELNVVTYLGDVQSREIIRQ--YEWCYESTKK-----LKFNAILTT 716
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL I W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 717 YEILLKDKTFLGSIGWASLLVDEAHRLKNDDSLLYKALKE-FDTNHRLLITGTPLQNSLK 775
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F + + F + + + S +T L L ++LRR K+
Sbjct: 776 ELWALLHFIMPERFESWDDFERNYGNTTNDKS----------YTKLHKELEPYILRRVKK 825
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKL--------------LALSSRTAN 319
+ + + + E+T +Q++ Y IL K L + + N
Sbjct: 826 DVEKSLPAKVEQILRVEMTSIQRQYYKWILSKNFDALRKGMKGSVGTFLNIVIELKKCCN 885
Query: 320 HQSLQN-------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
H +L SGKLV+LD LL +L +GHRVL+F+QM + LDI
Sbjct: 886 HAALTRPIEFETQRNSQQDVVQQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDI 945
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L ++L+ R +S++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG
Sbjct: 946 LAEYLQKRHFSFQRLDGSIKGELRKQALDHFNAE-----------GSTDFCFLLSTRAGG 994
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT H+VEE I+ RA++
Sbjct: 995 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTAHSVEENIVERAKQ 1054
Query: 481 KLRLSHNVV------GDDVVDREVKERTA--VETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ T+ D+L +I+ FG LF + +EE
Sbjct: 1055 KMVLDHLVIQRMDTTGRTVLDKNGGSNTSNPFNKDELSAILKFGAEELFKEEEDGDEE 1112
>gi|156098278|ref|XP_001615171.1| helicase [Plasmodium vivax Sal-1]
gi|148804045|gb|EDL45444.1| helicase, putative [Plasmodium vivax]
Length = 1399
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 198/531 (37%), Positives = 294/531 (55%), Gaps = 68/531 (12%)
Query: 13 IIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQA 72
++ D +E D +T + + +KP+Q+EGL+WL + Y +N +L DEMGLGKTLQ
Sbjct: 294 LLKDANEED-ETFIIKQPANINGCMKPYQIEGLNWLYQLYRHRINGILADEMGLGKTLQT 352
Query: 73 ISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY 132
IS L YL+F++ +++CP S D W E+ K+ +++ +Y G +EQRR + +
Sbjct: 353 ISLLCYLRFNKNIKRKSIIICPRSTLDNWYQEIKKWCTEMKAFKYYGSKEQRRELNK--- 409
Query: 133 EHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNV 192
NV +DVLLTTY++V+ D+ L I W + +IDEA R+KN SVL +
Sbjct: 410 ----------NVLHTDYDVLLTTYEIVIKDKSALFDIDWFFLVIDEAHRIKNDKSVLSSS 459
Query: 193 LREHFLMP-RRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKR 251
+R FL RLL+TGTP+ NNL ELW+L++F MP +F +F + F + SS+ K+
Sbjct: 460 VR--FLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISSNDNKQ 517
Query: 252 GKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRK 305
+I T L IL FMLRR K ++ + LPP EI V LQKK+Y+ IL K
Sbjct: 518 NEI---ITQLHTILKPFMLRRLKVEVEQS----LPPKREIYVFVGMSKLQKKLYSDILSK 570
Query: 306 ELPKLLALSS-------------RTANHQSLQN--------------TASGKLVVLDLLL 338
+ + A++ + NH L + SGK+ +LD LL
Sbjct: 571 NIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYIEGNHLIETSGKMSLLDKLL 630
Query: 339 KKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIE 398
+L RVLLF+QMT+ LDI+ D+ + Y Y R+DGS +ER I F+ ++
Sbjct: 631 PRLKKENSRVLLFSQMTRVLDIIDDYCRWKNYEYLRIDGSTVGDERQIRINQFNEPNS-- 688
Query: 399 RLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
F+F++STRAGG+G+NL AD VI ++ D+NPQ+D QA+ RAHRIGQ
Sbjct: 689 ---------KYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKK 739
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDL 509
V+ VT+++VEE I+ RA +KL+L ++ ++ KE E D+
Sbjct: 740 VIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNHKENNKQELHDI 790
>gi|448097434|ref|XP_004198673.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
gi|359380095|emb|CCE82336.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
Length = 1044
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 193/512 (37%), Positives = 293/512 (57%), Gaps = 64/512 (12%)
Query: 15 HDNDERDGQTPV-DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAI 73
H +DE D QT + ++ + +L+ +Q++GL+WLI Y +N +L DEMGLGKTLQ I
Sbjct: 108 HIDDESDAQTVLTESPSYIKGGQLREYQIQGLNWLISLYENRLNGILADEMGLGKTLQTI 167
Query: 74 SFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE 133
SFL YL++ + PGPF+V+ P S D W E A +TP + +L G +E+R+N+
Sbjct: 168 SFLGYLRYLKHIPGPFIVIVPKSTLDNWRREFAAWTPDVNILVLQGAKEERQNL------ 221
Query: 134 HVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
++E+ ++ FDV++T++++V+ ++ L + W Y ++DEA R+KN S L +L
Sbjct: 222 -IQERLLSTD-----FDVVITSFEMVIRERAHLRKFRWQYIVVDEAHRIKNEDSSLSQIL 275
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGK 253
RE F RLL+TGTP+QNNL ELWAL++F +P VFG F F++ S +
Sbjct: 276 RE-FYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSELFDEWFENQSGDSQQEREKN 334
Query: 254 IKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL- 307
+ L +LS F+LRR K VE +LP + +T +Q + Y +L K++
Sbjct: 335 QDKVVQQLHKLLSPFLLRRVKSD-VETS--LLPKIETNVYIGMTDMQIQWYRKLLEKDID 391
Query: 308 ------------PKLLALS---SRTANHQSLQNTA---------------SGKLVVLDLL 337
+LL + + NH L + A +GK+++LD +
Sbjct: 392 AVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAGKMIILDKM 451
Query: 338 LKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAI 397
LKK G RVL+F+QM++ LDIL+D+ LR Y+Y R+DGS E+R ++I F+
Sbjct: 452 LKKFQKEGSRVLIFSQMSRLLDILEDYCYLRDYNYCRIDGSTSHEDRISSIDDFN----- 506
Query: 398 ERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMN 457
A +D F+F+++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ
Sbjct: 507 ------APDSDKFIFLLTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQKK 560
Query: 458 HVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
V VTE+ +EE ++ RA +KLRL V+
Sbjct: 561 QVKVFRFVTENAIEEKVLDRAAQKLRLDKLVI 592
>gi|390355907|ref|XP_003728652.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 2
[Strongylocentrotus purpuratus]
gi|390355909|ref|XP_781410.3| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 3
[Strongylocentrotus purpuratus]
Length = 1835
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 200/488 (40%), Positives = 272/488 (55%), Gaps = 67/488 (13%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q++GL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL++ PL
Sbjct: 542 ELRDYQLDGLNWLAHSWCKRNSVILADEMGLGKTIQVISFLSYLFNVHQLYGPFLIVVPL 601
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + K+ V+ Y+G+ R +IR E N + L + +LTT
Sbjct: 602 STMTSWQREFEAWDSKMNVVVYIGDINSRNSIREY------EWCVHGNRNKLKLNAILTT 655
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL +PW ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 656 YEILLKDKAFLGAVPWAVLVVDEAHRLKNDDSLLYKSLKE-FETNHRLLITGTPLQNSLK 714
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELW+L+HF MP F T F F S A K G + SL L F+LRR K+
Sbjct: 715 ELWSLLHFIMPERFPTWEIFEEEF------SQADKNG-----YASLHQELEPFLLRRVKK 763
Query: 276 KLVECGHLMLPP------LTEITVLQKKVYASILRKELPKLL-ALSSRTA---------- 318
+ + LP E++ LQK+ Y IL + L L T+
Sbjct: 764 DVEKS----LPAKVERILRVEMSSLQKQYYKFILTRNFKALCKGLKGNTSSFINIMMELK 819
Query: 319 ---NHQSLQNT--------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L SGKLV+LD LL +L GHRVL+F+QM + LDIL
Sbjct: 820 KCCNHSLLIRPPEDESDPDLKYIIRGSGKLVLLDKLLTRLQERGHRVLIFSQMVRMLDIL 879
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
++L+ R + ++RLDGSIR E R A+ HF+ + G+ F F++STRAGG+
Sbjct: 880 SEYLQYRHFQHQRLDGSIRGEIRKQALDHFNAE-----------GSQDFCFLLSTRAGGL 928
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
GLNL +ADTVI ++ DWNPQ D QA+ RAHRIGQ V LVT+ T+EE I+ RA+RK
Sbjct: 929 GLNLASADTVIIFDSDWNPQNDIQAMARAHRIGQRRQVNIYRLVTKDTIEEEIIERAKRK 988
Query: 482 LRLSHNVV 489
+ L H V+
Sbjct: 989 MVLDHLVI 996
>gi|354547921|emb|CCE44656.1| hypothetical protein CPAR2_404600 [Candida parapsilosis]
Length = 1062
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 194/515 (37%), Positives = 293/515 (56%), Gaps = 69/515 (13%)
Query: 15 HDNDERDGQTP-VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAI 73
H +DE + T ++ + L+ +Q++GL+WLI Y ++ +L DEMGLGKTLQ I
Sbjct: 117 HQDDEENQHTVFTESPSYVKEGTLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTI 176
Query: 74 SFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE 133
SFL YL++ + GPF+++ P S D W E AK+TP + V+ G++E R NI
Sbjct: 177 SFLGYLRYVKHIDGPFIIIVPKSTLDNWRREFAKWTPDVNVVVLQGDKELRANI------ 230
Query: 134 HVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
+K++ ++ FDVL+T++++VL ++ L + W Y ++DEA R+KN S L ++
Sbjct: 231 -IKDRLYTAD-----FDVLITSFEMVLREKSALKKFKWEYIVVDEAHRIKNEQSSLSQII 284
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGK 253
R F RLL+TGTP+QNNL ELWAL++F +P VFG QF TF ++ ++ K
Sbjct: 285 R-LFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEQFDDTFDQ--QNNDLDEKAK 341
Query: 254 IKEQ---FTSLKGILSAFMLRRTKQKLVECGHLMLPPL-----TEITVLQKKVYASILRK 305
+EQ L +LS F+LRR K + + +LP + T +T +Q Y ++L K
Sbjct: 342 AEEQDKVIQELHQLLSPFLLRRVKSDVEKS---LLPKIETNVYTGMTDMQVSWYKNLLEK 398
Query: 306 EL-------------PKLLALS---SRTANHQSLQNTA---------------SGKLVVL 334
++ +LL + + NH L + A SGK+++L
Sbjct: 399 DIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLIYNSGKMIIL 458
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D +LKK G RVL+F+QM++ LDIL+D+ R+Y Y R+DGS E+R AI ++
Sbjct: 459 DKMLKKFKQEGSRVLIFSQMSRVLDILEDYCYFREYEYCRIDGSTAHEDRIEAIDEYN-- 516
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
A +D F+F+++TRAGG+G+NL +AD VI Y+ DWNPQ D QA+ RAHRIG
Sbjct: 517 ---------APDSDKFIFLLTTRAGGLGINLTSADVVILYDSDWNPQADLQAMDRAHRIG 567
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
Q V VTE+ +EE ++ RA +KLRL V+
Sbjct: 568 QKKQVKVYRFVTENAIEEKVLERAAQKLRLDQLVI 602
>gi|390355905|ref|XP_003728651.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 1
[Strongylocentrotus purpuratus]
Length = 1865
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 200/488 (40%), Positives = 272/488 (55%), Gaps = 67/488 (13%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q++GL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL++ PL
Sbjct: 542 ELRDYQLDGLNWLAHSWCKRNSVILADEMGLGKTIQVISFLSYLFNVHQLYGPFLIVVPL 601
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + K+ V+ Y+G+ R +IR E N + L + +LTT
Sbjct: 602 STMTSWQREFEAWDSKMNVVVYIGDINSRNSIREY------EWCVHGNRNKLKLNAILTT 655
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL +PW ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 656 YEILLKDKAFLGAVPWAVLVVDEAHRLKNDDSLLYKSLKE-FETNHRLLITGTPLQNSLK 714
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELW+L+HF MP F T F F S A K G + SL L F+LRR K+
Sbjct: 715 ELWSLLHFIMPERFPTWEIFEEEF------SQADKNG-----YASLHQELEPFLLRRVKK 763
Query: 276 KLVECGHLMLPP------LTEITVLQKKVYASILRKELPKLL-ALSSRTA---------- 318
+ + LP E++ LQK+ Y IL + L L T+
Sbjct: 764 DVEKS----LPAKVERILRVEMSSLQKQYYKFILTRNFKALCKGLKGNTSSFINIMMELK 819
Query: 319 ---NHQSLQNT--------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L SGKLV+LD LL +L GHRVL+F+QM + LDIL
Sbjct: 820 KCCNHSLLIRPPEDESDPDLKYIIRGSGKLVLLDKLLTRLQERGHRVLIFSQMVRMLDIL 879
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
++L+ R + ++RLDGSIR E R A+ HF+ + G+ F F++STRAGG+
Sbjct: 880 SEYLQYRHFQHQRLDGSIRGEIRKQALDHFNAE-----------GSQDFCFLLSTRAGGL 928
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
GLNL +ADTVI ++ DWNPQ D QA+ RAHRIGQ V LVT+ T+EE I+ RA+RK
Sbjct: 929 GLNLASADTVIIFDSDWNPQNDIQAMARAHRIGQRRQVNIYRLVTKDTIEEEIIERAKRK 988
Query: 482 LRLSHNVV 489
+ L H V+
Sbjct: 989 MVLDHLVI 996
>gi|156357062|ref|XP_001624043.1| predicted protein [Nematostella vectensis]
gi|156210795|gb|EDO31943.1| predicted protein [Nematostella vectensis]
Length = 863
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 202/500 (40%), Positives = 288/500 (57%), Gaps = 74/500 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G+T L+P+Q+EG+ W+ L G +LGDEMGLGKT+Q IS L LK + G FLV
Sbjct: 13 GIT--LRPYQLEGVGWMRDCALTGHGCILGDEMGLGKTIQTISVLLLLKRTIKHTGLFLV 70
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
L PLSV W +E+ +FT L+VL +G +E+R + +++ +K DV
Sbjct: 71 LSPLSVMANWKNEIKRFTKSLKVLSLIGSKEEREITKNKLFQDIKN-----------IDV 119
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
LLT+Y++ L + FL + W +DEA RLKN S+LY L + F +L+TGTP+Q
Sbjct: 120 LLTSYEICLRETSFLQRFHWSAVAVDEAHRLKNSQSLLYTELIQ-FKYDFSILLTGTPVQ 178
Query: 212 NNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
NNL EL++L+ F PS+F + +F + FK+ + L +LS F+
Sbjct: 179 NNLKELYSLLSFIAPSIFDLEYVEEFETAFKNLATGRDNTN--------SDLPQLLSPFL 230
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASIL-------------RKELPKL 310
LRR K +++ + LP +E+ + LQKK Y +IL R +L +
Sbjct: 231 LRRVKSEVM----VDLPEKSEVILYAGMSELQKKYYKAILMKDYDIFSTDGPSRNKLNSI 286
Query: 311 LALSSRTANHQSLQN--------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
L + NH L + TASGKL +D LL LY GH+VL+F+QMT+
Sbjct: 287 LTNLRKCVNHPYLFDGVEPEPFALGEHLITASGKLHAIDQLLSYLYKRGHKVLMFSQMTR 346
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDI+QD+L R Y+YERLDGS+R EER+ AI++F+ + D F+F++ST
Sbjct: 347 MLDIVQDYLGYRGYAYERLDGSVRGEERYIAIKNFNEE------------QDNFIFLLST 394
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
+AGG GLNL++ADTVIF + D+NPQ D QA RAHRIGQ V I LV +TVEE+I++
Sbjct: 395 KAGGQGLNLMSADTVIFVDSDYNPQNDLQAAARAHRIGQTRPVKIIRLVGRNTVEEIILK 454
Query: 477 RAERKLRLSHNVV-GDDVVD 495
A+ K+RL++NV+ G V D
Sbjct: 455 HADDKMRLTNNVIEGGQVYD 474
>gi|410171384|ref|XP_003960257.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
3 [Homo sapiens]
Length = 882
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 245/703 (34%), Positives = 345/703 (49%), Gaps = 128/703 (18%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 35 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 94
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 95 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 145
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E
Sbjct: 146 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE---------- 192
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
N+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 193 ------NSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASELHK 237
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 238 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 290
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 291 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHR 350
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F Q
Sbjct: 351 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQPI----------- 399
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 400 --FVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 457
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 458 DTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGST 517
Query: 526 NEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
+E D + G + V G ++ N + L E D S S+
Sbjct: 518 MDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSF 577
Query: 586 PDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK----- 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 578 EQLVNLQ-KTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAA 636
Query: 627 ------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 637 AKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 679
>gi|241953595|ref|XP_002419519.1| ISWI chromatin-remodeling complex ATPase, putative [Candida
dubliniensis CD36]
gi|223642859|emb|CAX43114.1| ISWI chromatin-remodeling complex ATPase, putative [Candida
dubliniensis CD36]
Length = 1054
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 197/516 (38%), Positives = 292/516 (56%), Gaps = 70/516 (13%)
Query: 15 HDNDERDGQTPV--DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQA 72
H +DE D Q V ++ + +L+ +Q++GL+WLI Y ++ +L DEMGLGKTLQ
Sbjct: 114 HQDDE-DHQHTVLTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQT 172
Query: 73 ISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY 132
ISFL YL++ + GPF+V+ P S D W E AK+TP + V+ G++EQR NI
Sbjct: 173 ISFLGYLRYIKHIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRANI----- 227
Query: 133 EHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNV 192
+K+Q + FDVL+T+++++L ++ L + W Y ++DEA R+KN S L +
Sbjct: 228 --IKDQ-----LYTAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKI 280
Query: 193 LREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRG 252
+R F RLL+TGTP+QNNL ELWAL++F +P VFG +QF F D ++ +
Sbjct: 281 IR-LFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAF-DNQNTEELDEEQ 338
Query: 253 KIKEQ---FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILR 304
K K+Q L +LS F+LRR K + +LP + +T +Q + Y +L
Sbjct: 339 KQKKQDKAVQELHQLLSPFLLRRVK---ADVEKSLLPKIETNVYIGMTDMQVEWYKRLLE 395
Query: 305 KEL-------------PKLLALS---SRTANHQSLQNTA---------------SGKLVV 333
K++ +LL + + NH L + A SGK+++
Sbjct: 396 KDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSGKMII 455
Query: 334 LDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSV 393
LD +LKK G RVL+F+QM++ LDIL+D+ R+Y Y R+DGS E+R AI ++
Sbjct: 456 LDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFREYEYCRIDGSTSHEDRIEAIDEYN- 514
Query: 394 QSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRI 453
A +D F+F+++TRAGG+G+NL +AD VI Y+ DWNPQ D QA+ RAHRI
Sbjct: 515 ----------APNSDKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRI 564
Query: 454 GQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
GQ V VTE +EE ++ RA +KLRL V+
Sbjct: 565 GQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVI 600
>gi|321264716|ref|XP_003197075.1| chromatin remodelling complex ATPase chain [Cryptococcus gattii
WM276]
gi|317463553|gb|ADV25288.1| Chromatin remodelling complex ATPase chain, putative [Cryptococcus
gattii WM276]
Length = 1096
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 199/534 (37%), Positives = 295/534 (55%), Gaps = 81/534 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +QV+GL+W++ + G+N +L DEMGLGKTLQ ISF+ YLKF Q PGP L++ P
Sbjct: 211 GKMRDYQVQGLNWMVSLHHNGINGILADEMGLGKTLQTISFIGYLKFHQGIPGPHLIIVP 270
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI--RRTMYEHVKEQSQMSNVSPLPFDVL 152
S D W E+AK+ P V+ G +E+R + RR + + FDVL
Sbjct: 271 KSTLDNWAREVAKWVPGFNVVVLQGTKEERAELIARRILTQD--------------FDVL 316
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++ L ++ L + W Y IIDEA R+KN S+L ++R F+ RLL+TGTP+QN
Sbjct: 317 ITSYEMCLREKSTLKRFSWEYIIIDEAHRIKNVDSLLSQIIRT-FVSRGRLLITGTPLQN 375
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF + F + FK A +K+ L +L F+LRR
Sbjct: 376 NLQELWALLNFILPDVFSSSEDFDAWFKT---KDEADPDAVVKQ----LHKVLRPFLLRR 428
Query: 273 TKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKELPKLLALSSR----------- 316
K + H +LP +T +Q+K Y S+L K++ + ++ +
Sbjct: 429 VK---ADVEHSLLPKKEINLYVGMTEMQRKWYKSLLEKDIDAVNGMTGKKEGKTRLLNIV 485
Query: 317 -----TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
NH L + A +GK+++LD LLK + G RVL+F+QM++
Sbjct: 486 MQLRKCCNHPYLFDGAEPGPPFTTDQHLVDNAGKMLILDKLLKSMKAKGSRVLIFSQMSR 545
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ + R + Y R+DGS E+R AAI ++ A G++ FVF+++T
Sbjct: 546 MLDILEDYCQFRGHQYCRIDGSTAHEDRIAAIDEYN-----------APGSEKFVFLLTT 594
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NLV AD V+ ++ DWNPQ D QA+ RAHRIGQ V +T+ VEE I+
Sbjct: 595 RAGGLGINLVTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITQDAVEERILE 654
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLFDPKAINNEES 529
RA +KL+L V+ + + K A DDL +I G K INN+ES
Sbjct: 655 RATQKLKLDQLVIQEGRAQQNAK--VAQNKDDLLDMIQHGAE----KIINNKES 702
>gi|403221295|dbj|BAM39428.1| SWI/SNF family transcriptional activator protein [Theileria
orientalis strain Shintoku]
Length = 932
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 198/500 (39%), Positives = 287/500 (57%), Gaps = 74/500 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ + KP+Q+EGL WL+ Y+ G+N +L DEMGLGKT Q ISFL+YLK + GP +VL
Sbjct: 125 LVGQSKPYQIEGLKWLVGLYVKGLNGILADEMGLGKTFQTISFLAYLKETHNVNGPHMVL 184
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+SE+ +F P L VL++VG +E+R + T + P +D+
Sbjct: 185 APKSTIGNWISEINRFCPSLRVLKFVGNKEERAILVAT------------ELDPDKYDIF 232
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+V +G L ++ W Y IIDEA R+KN S L V+R F RLL+TGTP+QN
Sbjct: 233 VTSYEVCCKTKGPLGKLNWKYLIIDEAHRIKNEESKLSEVVR-MFKTEYRLLITGTPLQN 291
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHS---SSAPKRGKIKEQFTSLKGILSAFM 269
NL ELWAL++F P VF + +F + F D V S A + + + L G+L FM
Sbjct: 292 NLKELWALLNFLFPIVFSSSEEFETVF-DLVGPKDLSQADRESRNLQIVARLHGVLRPFM 350
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKL------------- 310
LRR+K+ ++ +PP E ++ +QK++Y +LRK +P+L
Sbjct: 351 LRRSKRDVLTD----MPPKNELLLMVPLSTMQKQLYRDLLRKNVPELGVEDSTKSGMQVQ 406
Query: 311 ---LALSSRTA-NHQSL-----------------QNTASGKLVVLDLLLKKLYNSGHRVL 349
LA+ R A NH L QN SGKL ++D LL +L + RVL
Sbjct: 407 LLNLAMQLRKACNHPYLFEGYEDRNEDPFGEHLVQN--SGKLSLVDKLLNRLLGNNSRVL 464
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL+D+ +R Y Y R+DG+ +E+R + I F+ + ++ N
Sbjct: 465 IFSQMARMLDILEDYCRMRNYLYYRIDGNTSSEDRDSQISSFN--------HPDSQVN-- 514
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
+F++STRAGG+G+NL +A+ VI Y+ DWNPQVD QA+ RAHRIGQM V LV ++T
Sbjct: 515 -IFLLSTRAGGLGINLASANVVILYDSDWNPQVDLQAIDRAHRIGQMKPVYVYRLVHQYT 573
Query: 470 VEEVIMRRAERKLRLSHNVV 489
+EE I+ RA KL+L V+
Sbjct: 574 IEEKIIERATLKLQLDSAVI 593
>gi|83286649|ref|XP_730253.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23489925|gb|EAA21818.1| SNF2 family N-terminal domain, putative [Plasmodium yoelii yoelii]
Length = 1350
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/492 (38%), Positives = 280/492 (56%), Gaps = 67/492 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
++ +KP+Q+EGL+WL + Y +N +L DEMGLGKTLQ IS L YL+F++ ++
Sbjct: 239 NISGTMKPYQIEGLNWLYQLYRHKINGILADEMGLGKTLQTISLLCYLRFNKNIKRKNII 298
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+CP S D W E+ K+ +++ +Y G +EQR+ + +T+ +DV
Sbjct: 299 ICPRSTLDNWYEEIKKWCSEMKPFKYYGSKEQRKELNKTVLHS-------------DYDV 345
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP-RRLLMTGTPI 210
LLTTY++V+ D+ L I W + +IDEA R+KN SVL + +R FL RLL+TGTP+
Sbjct: 346 LLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNDKSVLSSSVR--FLKSENRLLITGTPL 403
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
NNL ELW+L++F MP +F +F + F + S++ K+ +I T L IL FML
Sbjct: 404 HNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEI---ITQLHTILKPFML 460
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS--------- 315
RR K ++ + LPP EI + LQKK+Y+ IL K + + A++
Sbjct: 461 RRLKVEVEQS----LPPKREIYIFVGMSKLQKKLYSDILSKNIDVINAMTGSKNQMLNIL 516
Query: 316 ----RTANHQSLQN--------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + SGK+ +LD LL +L RVLLF+QMT+
Sbjct: 517 MQLRKCCNHPYLFDGIEEPPYIEGNHLIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRL 576
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+ D+ +KY Y R+DGS +ER I F+ ++ F+F++STR
Sbjct: 577 LDIIDDYCRWKKYEYLRIDGSTVGDERQIRINKFNEPNS-----------KYFIFLLSTR 625
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI ++ D+NPQ+D QA+ RAHRIGQ V+ VT+++VEE I+ R
Sbjct: 626 AGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVER 685
Query: 478 AERKLRLSHNVV 489
A +KL+L ++
Sbjct: 686 AAKKLKLDSLII 697
>gi|323452052|gb|EGB07927.1| hypothetical protein AURANDRAFT_26802 [Aureococcus anophagefferens]
Length = 1012
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 206/543 (37%), Positives = 308/543 (56%), Gaps = 85/543 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+TA+++P+Q+EGL+WL++ + G+N +L DEMGLGKTLQ+IS L+YL ++ GP + +
Sbjct: 123 ITAKMRPYQLEGLNWLVKLHDNGINGILADEMGLGKTLQSISLLAYLHETRGITGPHICI 182
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P SVT+ W+ E+ K+ P L ++ +G +++R + R ++ P FDVL
Sbjct: 183 VPKSVTNNWMRELRKWCPTLRPVKLLGSKDERARVLR------------EDLRPGTFDVL 230
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR--RLLMTGTPI 210
+T+Y+ +L ++ L +I W Y +IDEA R+KNP+S L ++R L+P RLL+TGTP+
Sbjct: 231 VTSYEGILKEKAGLMKIQWQYLLIDEAHRIKNPNSSLSKIVR---LIPTQFRLLITGTPL 287
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFK--DAVHSSSAPKRGKIKEQFTSLKGILSAF 268
QNNL+ELWAL++F +P +F + F + F DA + K+ L +L F
Sbjct: 288 QNNLNELWALLNFLLPDIFASEADFETWFSLGDADAKDNVVKK---------LHTVLRPF 338
Query: 269 MLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALSS------- 315
MLRR K+ + + LPP E+ T +Q+ Y IL K+ L AL
Sbjct: 339 MLRRIKKDVEKD----LPPKREVKLYIGMTEMQRLWYTKILSKDAHTLNALGGPDRVQLL 394
Query: 316 -------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L A +GKLV++ LL KL RVL+F+Q
Sbjct: 395 NILMQLRKVCNHPYLFEGAEPGPPFMDGPHLWENTGKLVLMSKLLPKLMAQDSRVLIFSQ 454
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MT+ LDIL+D++ L +Y Y R+DGS ++R + + F+ A G++ F F+
Sbjct: 455 MTRMLDILEDYMRLNQYKYCRIDGSTSGDDRDSQMDVFN-----------APGSEKFAFL 503
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL AD V+ Y+ DWNPQVD QA+ RAHRIGQ V VTE TVEE
Sbjct: 504 LSTRAGGLGINLATADIVVLYDSDWNPQVDLQAMDRAHRIGQTKPVTVFRFVTEGTVEEK 563
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKA--INNEES 529
I+ RA+RKL L V+ R ++ A+ +DL +++ FG +F KA I +E+
Sbjct: 564 IIERADRKLFLDAAVIQQ---GRLAEQNAALGKNDLMAMVRFGADEIFASKAKTITDEDI 620
Query: 530 DDL 532
D L
Sbjct: 621 DTL 623
>gi|440891343|gb|ELR45087.1| Chromodomain-helicase-DNA-binding protein 1-like protein [Bos
grunniens mutus]
Length = 905
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 204/510 (40%), Positives = 280/510 (54%), Gaps = 89/510 (17%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+P+Q++G++WL + + +LGDEMGLGKT Q I+ YL
Sbjct: 37 DLRQWGLTGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 96
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++++R +++ + K++S+
Sbjct: 97 EGPFLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDL----KQESR----- 147
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 148 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 203
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E L
Sbjct: 204 TGTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQCYQDIEKES---------ESGNELYK 254
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A +
Sbjct: 255 LLQPFLLRRVKAEVAT----ELPRKTEVVIYHGMSALQKKYYKAILMKDLD---AFENEM 307
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLK-------- 339
A LQN ASGKL +LD LL
Sbjct: 308 AKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAFFQVVFPF 367
Query: 340 KLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIER 399
GHRVLLF+QMTQ LDILQD+L+ R YSYER+DGS+R EER AI++F
Sbjct: 368 LFLARGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNF-------- 419
Query: 400 LYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV 459
G F F++STRAGGVG+NL AADTVIF++ D+NPQ D QA RAHRIGQ V
Sbjct: 420 -----GQQPIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSV 474
Query: 460 LSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
I L+ TVEE++ R+A KL+L++ ++
Sbjct: 475 KVIRLIGRDTVEEIVYRKAASKLQLTNMII 504
>gi|389583592|dbj|GAB66326.1| helicase [Plasmodium cynomolgi strain B]
Length = 1455
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 193/511 (37%), Positives = 286/511 (55%), Gaps = 68/511 (13%)
Query: 13 IIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQA 72
++ D +E D +T + + +KP+Q+EGL+WL + Y +N +L DEMGLGKTLQ
Sbjct: 333 LLKDANEED-ETFIIKQPANINGCMKPYQIEGLNWLYQLYRHRINGILADEMGLGKTLQT 391
Query: 73 ISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY 132
IS L YL+F++ +++CP S D W E+ K+ +++ +Y G +EQRR + +
Sbjct: 392 ISLLCYLRFNKNIKRKSIIICPRSTLDNWYQEIKKWCTEMKAFKYYGSKEQRRELNK--- 448
Query: 133 EHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNV 192
NV +DVLLTTY++V+ D+ L I W + +IDEA R+KN SVL +
Sbjct: 449 ----------NVLHTDYDVLLTTYEIVIKDKSALFDIDWFFLVIDEAHRIKNDKSVLSSS 498
Query: 193 LREHFLMP-RRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKR 251
+R FL RLL+TGTP+ NNL ELW+L++F MP +F +F + F + S + K+
Sbjct: 499 VR--FLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISLNDNKQ 556
Query: 252 GKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRK 305
+I T L IL FMLRR K ++ + LPP EI V LQKK+Y+ IL K
Sbjct: 557 SEI---ITQLHTILKPFMLRRLKVEVEQS----LPPKREIYVFVGMSKLQKKLYSDILSK 609
Query: 306 ELPKLLALSS-------------RTANHQSLQN--------------TASGKLVVLDLLL 338
+ + A++ + NH L + SGK+ +LD LL
Sbjct: 610 NIDVINAMTGSKNQMLNILMQLRKCCNHPYLFDGIEEPPYVEGNHLIETSGKMSLLDKLL 669
Query: 339 KKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIE 398
+L RVLLF+QMT+ LDI+ D+ + Y Y R+DGS +ER I F+ ++
Sbjct: 670 PRLKKENSRVLLFSQMTRVLDIIDDYCRWKNYEYLRIDGSTVGDERQIRINQFNEPNS-- 727
Query: 399 RLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
F+F++STRAGG+G+NL AD VI ++ D+NPQ+D QA+ RAHRIGQ
Sbjct: 728 ---------KYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKK 778
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
V+ VT+++VEE I+ RA +KL+L ++
Sbjct: 779 VIVYRFVTQNSVEEKIVERAAKKLKLDSLII 809
>gi|62319947|dbj|BAD94038.1| pseudogene [Arabidopsis thaliana]
Length = 1221
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 311/572 (54%), Gaps = 79/572 (13%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ + L+ +Q+EGL++L+ +L NV+L DEMGLGKT+Q++S L +L+ +Q PGPF
Sbjct: 618 EWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPF 677
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
LV+ PLS W E K+ P + ++ YVG R R ++ + + K+ + P+ F
Sbjct: 678 LVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGR-----PIKF 732
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+ LLTTY+VVL D+ LS+I W Y ++DEA RLKN + LY L E F +LL+TGTP
Sbjct: 733 NALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLE-FSTKNKLLITGTP 791
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QN++ ELWAL+HF P F ++F+ +K+ + + + +L L +
Sbjct: 792 LQNSVEELWALLHFLDPGKFKNKDEFVENYKNLNSFNES--------ELANLHLELRPHI 843
Query: 270 LRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKE--------------LPK 309
LRR + + + LPP E++ LQK+ Y IL + L
Sbjct: 844 LRRVIKDVEKS----LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLN 899
Query: 310 LLALSSRTANHQSLQNTA--------------------SGKLVVLDLLLKKLYNSGHRVL 349
++ + NH L +A SGKLV+LD LL +L + HRVL
Sbjct: 900 IVVELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVL 959
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL ++L LR + ++RLDGS +AE R A+ HF+ A +D
Sbjct: 960 IFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFN-----------APASDD 1008
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL ADTV+ ++ DWNPQ D QA+ RAHRIGQ V VT +
Sbjct: 1009 FCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKS 1068
Query: 470 VEEVIMRRAERKLRLSHNVVGD-----DVVDREVKERTAVETDDLRSII-FGLHLFDPKA 523
VEE I+ RA+RK+ L H V+ + RE K+ + + ++L +I+ FG +
Sbjct: 1069 VEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKED 1128
Query: 524 INNEESDDLRLSGLNSMVEKVIAMRHEQVSGK 555
N+EES L SM I R EQV K
Sbjct: 1129 KNDEESKKRLL----SMDIDEILERAEQVEEK 1156
>gi|149240541|ref|XP_001526146.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450269|gb|EDK44525.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 1088
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 191/494 (38%), Positives = 281/494 (56%), Gaps = 66/494 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+EGL+WLI ++ +L DEMGLGKTLQ ISFL YL++ + GPF+++ P
Sbjct: 156 GKLREYQIEGLNWLISLNENRLSGILADEMGLGKTLQTISFLGYLRYIKHVDGPFIIIVP 215
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S D W E +K+TP ++V+ G++EQR +I Q+Q+ FDVL+T
Sbjct: 216 KSTLDNWRREFSKWTPDVKVVVLQGDKEQRNDII---------QNQLYTAQ---FDVLIT 263
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
++++VL ++ L + W Y ++DEA R+KN S L ++R F RLL+TGTP+QNNL
Sbjct: 264 SFEMVLREKSALKKFRWEYIVVDEAHRIKNEQSSLSQIIR-LFYSRNRLLITGTPLQNNL 322
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ---FTSLKGILSAFMLR 271
ELWAL++F +P VFG QF TF +S ++ K +EQ L +LS F+LR
Sbjct: 323 HELWALLNFLLPDVFGDSEQFDETFDRQNGNSELDEKAKQEEQDKVIQELHQLLSPFLLR 382
Query: 272 RTKQKLVECGHLMLPPL-----TEITVLQKKVYASILRKEL-------------PKLLAL 313
R K + +LP + T +T +Q + Y +L K++ +LL +
Sbjct: 383 RVK---ADVEKSLLPKIESNVYTRMTDMQLEWYKKLLEKDIDAVNGVVGKREGKTRLLNI 439
Query: 314 S---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NH L + A SGK+++LD +LKK G RVL+F+QM+
Sbjct: 440 VMQLRKCCNHPYLFDGAEPGPPYTTDEHLIDNSGKMIILDKMLKKFQKEGSRVLIFSQMS 499
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+++
Sbjct: 500 RVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYN-----------APDSAKFVFLLT 548
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +AD VI Y+ DWNPQ D QA+ RAHRIGQ V VTE+ +EE ++
Sbjct: 549 TRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTENAIEEKVL 608
Query: 476 RRAERKLRLSHNVV 489
RA +KLRL V+
Sbjct: 609 ERAAQKLRLDQLVI 622
>gi|145359958|ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana]
gi|330251136|gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana]
Length = 1724
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 311/572 (54%), Gaps = 79/572 (13%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ + L+ +Q+EGL++L+ +L NV+L DEMGLGKT+Q++S L +L+ +Q PGPF
Sbjct: 618 EWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPF 677
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
LV+ PLS W E K+ P + ++ YVG R R ++ + + K+ + P+ F
Sbjct: 678 LVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGR-----PIKF 732
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+ LLTTY+VVL D+ LS+I W Y ++DEA RLKN + LY L E F +LL+TGTP
Sbjct: 733 NALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLE-FSTKNKLLITGTP 791
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QN++ ELWAL+HF P F ++F+ +K+ + + + +L L +
Sbjct: 792 LQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNES--------ELANLHLELRPHI 843
Query: 270 LRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKE--------------LPK 309
LRR + + + LPP E++ LQK+ Y IL + L
Sbjct: 844 LRRVIKDVEKS----LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLN 899
Query: 310 LLALSSRTANHQSLQNTA--------------------SGKLVVLDLLLKKLYNSGHRVL 349
++ + NH L +A SGKLV+LD LL +L + HRVL
Sbjct: 900 IVVELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVL 959
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL ++L LR + ++RLDGS +AE R A+ HF+ A +D
Sbjct: 960 IFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFN-----------APASDD 1008
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL ADTV+ ++ DWNPQ D QA+ RAHRIGQ V VT +
Sbjct: 1009 FCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKS 1068
Query: 470 VEEVIMRRAERKLRLSHNVVGD-----DVVDREVKERTAVETDDLRSII-FGLHLFDPKA 523
VEE I+ RA+RK+ L H V+ + RE K+ + + ++L +I+ FG +
Sbjct: 1069 VEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKED 1128
Query: 524 INNEESDDLRLSGLNSMVEKVIAMRHEQVSGK 555
N+EES L SM I R EQV K
Sbjct: 1129 KNDEESKKRLL----SMDIDEILERAEQVEEK 1156
>gi|367010464|ref|XP_003679733.1| hypothetical protein TDEL_0B03930 [Torulaspora delbrueckii]
gi|359747391|emb|CCE90522.1| hypothetical protein TDEL_0B03930 [Torulaspora delbrueckii]
Length = 1078
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 193/515 (37%), Positives = 283/515 (54%), Gaps = 75/515 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ L+ +Q++GL+WLI + G+ +L DEMGLGKTLQ I+FL YL++ + PGPFLV+
Sbjct: 135 INGSLRSYQIQGLNWLISLHQNGLAGILADEMGLGKTLQTIAFLGYLRYIEKVPGPFLVI 194
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP++ L G +E+R I R + FD+
Sbjct: 195 APKSTLNNWLREINRWTPEVNALILQGTKEERSEIIR------------DRLLACDFDIC 242
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ + + W Y +IDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 243 IASYEIIIREKSYFKKFDWQYIVIDEAHRIKNEESMLSQVLRE-FSSRNRLLITGTPLQN 301
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPK--RGKIKEQFTSLKGILSAFML 270
NL ELWAL++F +P +F F DA SS A + KI +Q L +L F+L
Sbjct: 302 NLHELWALLNFLLPDIFADSQDF-----DAWFSSEATDEDQDKIVKQ---LHTVLQPFLL 353
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS--------- 315
RR K + + L P E+ V +QKK Y IL K+L + A S
Sbjct: 354 RRIKNDVEKS----LLPKKELNVYVGMSKMQKKWYKQILEKDLDAVNAESGSKESKTRLL 409
Query: 316 -------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L + A S KL VLD LLK L G RVL+F+Q
Sbjct: 410 NIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSAKLNVLDKLLKNLKEQGSRVLIFSQ 469
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDI++D+ R+Y Y R+DGS E+R AI ++ + G+ F+F+
Sbjct: 470 MSRVLDIMEDYCYFREYEYCRIDGSTAHEDRIKAIDEYN-----------SPGSSKFIFL 518
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V VT+++VEE
Sbjct: 519 LTTRAGGLGINLTTADAVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDNSVEEK 578
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDD 508
I+ RA +KLRL V+ + V + K+ ++ D
Sbjct: 579 ILERATQKLRLDQLVIQQNRVSAQKKKENKGDSKD 613
>gi|32563629|ref|NP_491994.2| Protein CHD-1 [Caenorhabditis elegans]
gi|25004979|emb|CAB07481.2| Protein CHD-1 [Caenorhabditis elegans]
Length = 1461
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 195/493 (39%), Positives = 281/493 (56%), Gaps = 71/493 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
T +L+ +Q+EGL+W++ + G + +L DEMGLGKT+Q+IS L+ L GP+LV+
Sbjct: 402 THKLRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVV 461
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
PLS W E A++ P++ ++ Y+G+ R IR+ YE + + + +L
Sbjct: 462 PLSTMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQ--YEWF-----VGGTKKMKINAIL 514
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+++L D+ FLS I W ++DEA RLKN S+LY L + F +LL+TGTP+QN+
Sbjct: 515 TTYEILLKDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQ-FRFNHKLLITGTPLQNS 573
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL+HF MP F +F + ++ H ++L L F+LRR
Sbjct: 574 LKELWALLHFIMPEKFDCWEEFETAHNESNHKG-----------ISALHKKLEPFLLRRV 622
Query: 274 KQKLVECGHLMLPPLTE------ITVLQKKVYASILRK---ELPKLLALS---------- 314
K+ + + LPP TE +T QK+ Y IL K EL K + S
Sbjct: 623 KKDVEKS----LPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVME 678
Query: 315 -SRTANHQSLQN-----------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH SL +SGKL++LD LL +L + GHRVL+F+QM
Sbjct: 679 LKKCCNHASLTRQYDHIYDDAQGRLQQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVM 738
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDILQ++L+LR++ +RLDGS+RA+ R A+ H++ A G+ F F++ST
Sbjct: 739 MLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYN-----------APGSTDFAFLLST 787
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V LVT+ +VEE I+
Sbjct: 788 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVE 847
Query: 477 RAERKLRLSHNVV 489
RA+RKL L H V+
Sbjct: 848 RAKRKLVLDHLVI 860
>gi|326912863|ref|XP_003202765.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Meleagris gallopavo]
Length = 861
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 206/499 (41%), Positives = 283/499 (56%), Gaps = 82/499 (16%)
Query: 30 EFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGP 88
++G+T +L+P+Q++G++WL++ Y + +LGDEMGLGKT Q IS L YL +
Sbjct: 7 QWGITGIKLRPYQLDGVNWLVQCYQVQRGCILGDEMGLGKTCQTISLLLYLTKKLTNKER 66
Query: 89 FLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP 148
L+LCPLSV W E+ +F P L + Y+G +E+R ++ +++KEQS
Sbjct: 67 SLILCPLSVLSNWKEELERFAPGLSFMTYIGNKEERSELQ----QNLKEQSH-------- 114
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY++ L D FL W ++DEA RLKN +S+LY L E + LL+TGT
Sbjct: 115 FHVLLTTYEICLKDAAFLKFFDWAALVVDEAHRLKNQNSLLYETLTE-LPVGFSLLLTGT 173
Query: 209 PIQNNLSELWALMHFCMPSVF--GTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
PIQN+L EL++L+ F P +F + +F+ ++ AV P + L +L
Sbjct: 174 PIQNSLQELYSLLSFIEPDIFPRKQVKEFVEYYQ-AVEKECEPAK--------ELHSLLQ 224
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALSSRTANH 320
F+LRR K ++ LP E+ + LQ+K Y +IL K+L A T
Sbjct: 225 PFLLRRVKSEVTA----DLPKKVEVVLYHGMSALQRKYYKAILTKDLD---AFEGGTGRK 277
Query: 321 QSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHRVLL 350
+LQN ASGKL +LD LL LY+ GHRVLL
Sbjct: 278 VTLQNVLTQLRKCVAHPYLFNGVEPEPFEIGDHIIEASGKLCLLDKLLSFLYDGGHRVLL 337
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LDILQD+++ R YSYERLDGS+R EER AI++F G F
Sbjct: 338 FSQMTKLLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNF-------------GQQPIF 384
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF++STRA GVG+NL AADTVIF + D+NPQ D QA+ RAHRIGQ V I L+ TV
Sbjct: 385 VFLLSTRA-GVGMNLTAADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVKIIRLIGRDTV 443
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE+I RRA KLRL++ +V
Sbjct: 444 EEIIYRRAASKLRLTNAIV 462
>gi|341887543|gb|EGT43478.1| hypothetical protein CAEBREN_09271 [Caenorhabditis brenneri]
Length = 1459
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/491 (39%), Positives = 279/491 (56%), Gaps = 71/491 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+ +Q+EGL+W+I + G + +L DEMGLGKT+Q+IS L+ L GP+LV+ PL
Sbjct: 406 KLRDYQLEGLNWMIYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYELAGPYLVVVPL 465
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E A++ P + ++ Y+G+ R IR+ YE + + + +LTT
Sbjct: 466 STMAAWQKEFAQWAPDMNLVVYMGDVVSRDMIRQ--YEWY-----VGGTKKMKINAILTT 518
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FLS + W ++DEA RLKN S+LY L + F +LL+TGTP+QN+L
Sbjct: 519 YEILLKDKAFLSSVDWAALLVDEAHRLKNDESLLYKCLTQ-FRFNHKLLITGTPLQNSLK 577
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F +F + ++ H ++L L F+LRR K+
Sbjct: 578 ELWALLHFIMPEKFDCWEEFETAHNESNHKG-----------ISALHKKLEPFLLRRVKK 626
Query: 276 KLVECGHLMLPPLTE------ITVLQKKVYASILRK---ELPKLLALS-----------S 315
+ + LPP TE +T QK+ Y IL K EL K + S
Sbjct: 627 DVEKS----LPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELK 682
Query: 316 RTANHQSLQN-----------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH SL +SGKL++LD LL +L + GHRVL+F+QM L
Sbjct: 683 KCCNHASLTRQYDHIYDDAQGRLQQLLKSSGKLILLDKLLCRLKDKGHRVLIFSQMVMML 742
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DILQ++L+LR++ +RLDGS+RA+ R A+ H++ A G+ F F++STRA
Sbjct: 743 DILQEYLQLRRFPSQRLDGSMRADLRKQALDHYN-----------APGSTDFAFLLSTRA 791
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V LVT+ +VEE I+ RA
Sbjct: 792 GGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERA 851
Query: 479 ERKLRLSHNVV 489
+RKL L H V+
Sbjct: 852 KRKLVLDHLVI 862
>gi|124803472|ref|XP_001347729.1| PfSNF2L [Plasmodium falciparum 3D7]
gi|23495979|gb|AAN35642.1|AE014836_39 PfSNF2L [Plasmodium falciparum 3D7]
Length = 1426
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 188/492 (38%), Positives = 277/492 (56%), Gaps = 67/492 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
+ +KP+Q+EGL+WL + Y +N +L DEMGLGKTLQ IS L YL+F++ ++
Sbjct: 317 NINGTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIKKKSII 376
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+CP S D W E+ K+ ++ +Y G ++QR+ + R N+ FDV
Sbjct: 377 ICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNR-------------NLLHSDFDV 423
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP-RRLLMTGTPI 210
LLTTY++V+ D+ L I W + +IDEA R+KN SVL + +R FL RLL+TGTP+
Sbjct: 424 LLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVR--FLRSENRLLITGTPL 481
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
NNL ELW+L++F MP +F +F + F + S++ K+ +I T L IL FML
Sbjct: 482 HNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEI---ITQLHTILKPFML 538
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS--------- 315
RR K ++ + LPP EI + LQKK+Y+ IL K + L A++
Sbjct: 539 RRLKVEVEQS----LPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKNQMLNIL 594
Query: 316 ----RTANHQSLQN--------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + SGK+ +LD LL +L RVLLF+QMT+
Sbjct: 595 MQLRKCCNHPYLFDGIEEPPYIEGNHLIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRL 654
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+ D+ + Y Y R+DGS +ER I F+ ++ F+F++STR
Sbjct: 655 LDIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFNEPNS-----------KYFIFLLSTR 703
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI ++ D+NPQ+D QA+ RAHRIGQ V+ VT+++VEE I+ R
Sbjct: 704 AGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVER 763
Query: 478 AERKLRLSHNVV 489
A +KL+L ++
Sbjct: 764 AAKKLKLDSLII 775
>gi|448101270|ref|XP_004199521.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
gi|359380943|emb|CCE81402.1| Piso0_002057 [Millerozyma farinosa CBS 7064]
Length = 1044
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/491 (38%), Positives = 282/491 (57%), Gaps = 63/491 (12%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q++GL+WLI Y +N +L DEMGLGKTLQ ISFL YL++ + PGPF+V+ P
Sbjct: 129 GQLREYQIQGLNWLISLYENRLNGILADEMGLGKTLQTISFLGYLRYLKHIPGPFIVIVP 188
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S D W E A +TP + +L G +E+R+N+ ++E+ ++ FDV++T
Sbjct: 189 KSTLDNWRREFATWTPDVNILVLQGSKEERQNL-------IQERLLSTD-----FDVVIT 236
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
++++V+ ++ L + W Y ++DEA R+KN S L +LRE F RLL+TGTP+QNNL
Sbjct: 237 SFEMVIRERAHLKKFRWQYIVVDEAHRIKNEDSSLSQILRE-FYSKNRLLITGTPLQNNL 295
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VFG F F++ S + + L +LS F+LRR K
Sbjct: 296 HELWALLNFLLPDVFGDSELFDEWFENQSGDSQQEREKNQDKVVQQLHKLLSPFLLRRVK 355
Query: 275 QKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------PKLLALS-- 314
VE +LP + +T +Q + Y +L K++ +LL +
Sbjct: 356 SD-VETS--LLPKIETNVYIGMTDMQIQWYRKLLEKDIDAVNGVVGKREGKTRLLNIVMQ 412
Query: 315 -SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A +GK+++LD +L+K G RVL+F+QM++ L
Sbjct: 413 LRKCCNHPYLFDGAEPGPPYTTDEHLVYNAGKMIILDKMLRKFQKEGSRVLIFSQMSRLL 472
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ LR Y+Y R+DGS E+R ++I F+ A +D F+F+++TRA
Sbjct: 473 DILEDYCYLRDYNYCRIDGSTSHEDRISSIDDFN-----------APDSDKFIFLLTTRA 521
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ D QA+ RAHRIGQ V VTE+ +EE ++ RA
Sbjct: 522 GGLGINLTTADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTENAIEEKVLDRA 581
Query: 479 ERKLRLSHNVV 489
+KLRL V+
Sbjct: 582 AQKLRLDKLVI 592
>gi|323452051|gb|EGB07926.1| hypothetical protein AURANDRAFT_26999 [Aureococcus anophagefferens]
Length = 639
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 205/543 (37%), Positives = 307/543 (56%), Gaps = 85/543 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+TA+++P+Q+EGL+WL++ + G+N +L DEMG GKTLQ+IS L+YL ++ GP + +
Sbjct: 123 ITAKMRPYQLEGLNWLVKLHDNGINGILADEMGFGKTLQSISLLAYLHETRGITGPHICI 182
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P SVT+ W+ E+ K+ P L ++ +G +++R + R ++ P FDVL
Sbjct: 183 VPKSVTNNWMRELRKWCPTLRPVKLLGSKDERARVLR------------EDLRPGTFDVL 230
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR--RLLMTGTPI 210
+T+Y+ +L ++ L +I W Y +IDEA R+KNP+S L ++R L+P RLL+TGTP+
Sbjct: 231 VTSYEGILKEKAGLMKIQWQYLLIDEAHRIKNPNSSLSKIVR---LIPTQFRLLITGTPL 287
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFK--DAVHSSSAPKRGKIKEQFTSLKGILSAF 268
QNNL+ELWAL++F +P +F + F + F DA + K+ L +L F
Sbjct: 288 QNNLNELWALLNFLLPDIFASEADFETWFSLGDADAKDNVVKK---------LHTVLRPF 338
Query: 269 MLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALSS------- 315
MLRR K+ + + LPP E+ T +Q+ Y IL K+ L AL
Sbjct: 339 MLRRIKKDVEKD----LPPKREVKLYIGMTEMQRLWYTKILSKDAHTLNALGGPDRVQLL 394
Query: 316 -------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L A +GKLV++ LL KL RVL+F+Q
Sbjct: 395 NILMQLRKVCNHPYLFEGAEPGPPFMDGPHLWENTGKLVLMSKLLPKLMAQDSRVLIFSQ 454
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MT+ LDIL+D++ L +Y Y R+DGS ++R + + F+ A G++ F F+
Sbjct: 455 MTRMLDILEDYMRLNQYKYCRIDGSTSGDDRDSQMDVFN-----------APGSEKFAFL 503
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL AD V+ Y+ DWNPQVD QA+ RAHRIGQ V VTE TVEE
Sbjct: 504 LSTRAGGLGINLATADIVVLYDSDWNPQVDLQAMDRAHRIGQTKPVTVFRFVTEGTVEEK 563
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKA--INNEES 529
I+ RA+RKL L V+ R ++ A+ +DL +++ FG +F KA I +E+
Sbjct: 564 IIERADRKLFLDAAVIQQ---GRLAEQNAALGKNDLMAMVRFGADEIFASKAKTITDEDI 620
Query: 530 DDL 532
D L
Sbjct: 621 DTL 623
>gi|4733988|gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis
thaliana]
Length = 1738
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 212/572 (37%), Positives = 308/572 (53%), Gaps = 81/572 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ + L+ +Q+EGL++L+ +L NV+L DEMGLGKT+Q++S L +L+ +Q PGPF
Sbjct: 634 EWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPF 693
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
LV+ PLS W E K+ P + ++ YVG R R +T H + P+ F
Sbjct: 694 LVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVRNKTNDVHKVGR-------PIKF 746
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+ LLTTY+VVL D+ LS+I W Y ++DEA RLKN + LY L E F +LL+TGTP
Sbjct: 747 NALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLE-FSTKNKLLITGTP 805
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QN++ ELWAL+HF P F ++F+ +K+ + + + +L L +
Sbjct: 806 LQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNES--------ELANLHLELRPHI 857
Query: 270 LRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKE--------------LPK 309
LRR + + + LPP E++ LQK+ Y IL + L
Sbjct: 858 LRRVIKDVEKS----LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLN 913
Query: 310 LLALSSRTANHQSLQNTA--------------------SGKLVVLDLLLKKLYNSGHRVL 349
++ + NH L +A SGKLV+LD LL +L + HRVL
Sbjct: 914 IVVELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVL 973
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL ++L LR + ++RLDGS +AE R A+ HF+ A +D
Sbjct: 974 IFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFN-----------APASDD 1022
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL ADTV+ ++ DWNPQ D QA+ RAHRIGQ V VT +
Sbjct: 1023 FCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKS 1082
Query: 470 VEEVIMRRAERKLRLSHNVVGD-----DVVDREVKERTAVETDDLRSII-FGLHLFDPKA 523
VEE I+ RA+RK+ L H V+ + RE K+ + + ++L +I+ FG +
Sbjct: 1083 VEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKED 1142
Query: 524 INNEESDDLRLSGLNSMVEKVIAMRHEQVSGK 555
N+EES L SM I R EQV K
Sbjct: 1143 KNDEESKKRLL----SMDIDEILERAEQVEEK 1170
>gi|345322884|ref|XP_001511990.2| PREDICTED: chromodomain helicase DNA binding protein 1-like
[Ornithorhynchus anatinus]
Length = 829
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 205/491 (41%), Positives = 271/491 (55%), Gaps = 80/491 (16%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ G++WL++ Y +LGDEMGLGKT Q I+ L YL+ + S GPFL+LCPLS
Sbjct: 6 LRSYQLAGVNWLVQHYRQQHGCILGDEMGLGKTCQTIALLVYLRGNLKSNGPFLILCPLS 65
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V W EM +F P L + Y G +E R + +H +Q + F VLLTTY
Sbjct: 66 VLGNWKEEMERFAPGLSCVAYTGAKEDRAGL-----QHELKQEEC-------FHVLLTTY 113
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+V L D FL W ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L E
Sbjct: 114 EVCLKDASFLKAFSWQALVVDEAHRLKNQSSLLHKTLSE-FSVGFSLLLTGTPIQNSLQE 172
Query: 217 LWALMHFCMPSVF--GTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
L++L+ F PSVF + F+ F+ V + P + L+ +L F+LRR K
Sbjct: 173 LYSLLSFVEPSVFPWDQRDDFVQRFR-GVEEDTEPGK--------ELRRLLQPFLLRRVK 223
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT-- 326
++ LP E+ + LQ+ VY +IL K+L A LQN
Sbjct: 224 AEVAP----ELPRKVELVLFHGLSDLQRTVYRAILMKDLD---AFEREMGKKVKLQNILS 276
Query: 327 ----------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
ASGKL +LD LL LY GHRVLLF+QMT+ L
Sbjct: 277 QLRKCVGHPYLFEGVEPEPFAIGDHLVEASGKLHLLDKLLAFLYAGGHRVLLFSQMTRML 336
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
D+LQD+++ R YSYERLDGS+R EER AI++F Q FVF++STRA
Sbjct: 337 DVLQDYMDYRGYSYERLDGSVRGEERHLAIKNFGQQPV-------------FVFLLSTRA 383
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GGVG+NL AADTVIF + D+NPQ D QA R HRIGQ V I L+ TVEE+I R A
Sbjct: 384 GGVGMNLTAADTVIFVDSDFNPQNDLQATARVHRIGQSKPVKIIRLIGRDTVEEIIYRTA 443
Query: 479 ERKLRLSHNVV 489
KLRL++ ++
Sbjct: 444 VSKLRLTNAIM 454
>gi|290994049|ref|XP_002679645.1| predicted protein [Naegleria gruberi]
gi|284093262|gb|EFC46901.1| predicted protein [Naegleria gruberi]
Length = 1001
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 229/620 (36%), Positives = 332/620 (53%), Gaps = 104/620 (16%)
Query: 7 LQVAAKIIHDNDERD-GQTPVDAAEFGV-TAELKPHQVEGLSWLIRRYLLGVNV---LLG 61
LQ+ + + N+ RD Q P ++++ + + +LK HQ + +SWL + LL +LG
Sbjct: 92 LQIDCECL--NEMRDVDQLPNPSSKYLLNSCKLKNHQWQAVSWL-KSLLLDNKTHGGILG 148
Query: 62 DEMGLGKTLQAISFLSYLKFS---QMSPGPFLVLCPLSVTDGWVSEMAKFTPK-LEVLRY 117
D+MGLGKTL+ ISF Y S + S PFL++ PLS+ + W E KF + VLRY
Sbjct: 149 DDMGLGKTLEVISFFCYWMESTDKESSRKPFLIVSPLSLIENWCLEFNKFCGNSVRVLRY 208
Query: 118 VGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIID 177
G +E+R ++ T+ E E + P+DV++T+Y+ V D+ FLS + +D
Sbjct: 209 HGNQEERAELQDTLNEEFAESGE------FPYDVIVTSYETVTNDESFLSGFEYKCLCVD 262
Query: 178 EAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTL-NQFL 236
EA RLKNP+S+LY L++ + R +LM+GTP+ NN ELWAL++FC P+ F L F
Sbjct: 263 EAHRLKNPNSILYKALQQIYKYERVILMSGTPLMNNTKELWALLYFCAPTYFDHLFETFD 322
Query: 237 STFKDAVHSSSAPKRGKIKEQF-------------------TSLKGILSAFMLRRTKQKL 277
S F S + + I E + + +L F+LRRTK ++
Sbjct: 323 SWFPQQCFLSKSTLKKSISESVDIEEDIDENVEDVDADSVRNNFQIVLKPFLLRRTKNQV 382
Query: 278 VECGHLMLPP------LTEITVLQKKVYASILRKE-----------LPKLLALSSRTANH 320
++ LPP T +T LQKK Y L + L +L + +H
Sbjct: 383 LKND---LPPKEEHIIYTRLTTLQKKFYKGFLMADRNAIGKKNSRGLSNVLMSLRKCCDH 439
Query: 321 QSLQNTA--------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLE 366
+ A SGK+++LD LLKKL GH+VL+F+QMTQ LDILQD+
Sbjct: 440 PYMFEGAEEEPFVEGEHIVNNSGKMIILDKLLKKLKQEGHKVLIFSQMTQMLDILQDYFS 499
Query: 367 LRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLV 426
RK++YERLDGS+R EERF AI+ F+ D FVF++STRAGGVGLNL
Sbjct: 500 FRKWNYERLDGSVRGEERFEAIKSFT-------------DKDVFVFLLSTRAGGVGLNLT 546
Query: 427 AADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSH 486
+ADTVIF + D NPQ+D QA R HRIGQ V LVTE +VEEVI++R+ +K+ LS
Sbjct: 547 SADTVIFMDMDMNPQMDLQAQARCHRIGQDKPVTVYRLVTESSVEEVILKRSMKKIALSI 606
Query: 487 NVVG-----DDVVDREVKERTAVETDDLRSIIFGLH-LFDPKA-INNEESDDLRLSGLNS 539
N + + D E+ + +T + I FGLH + D + ++ EESD
Sbjct: 607 NTIDTSSAVSNAFDSSSDEKLSSDT-IMEMISFGLHKIMDSTSDVSAEESD--------- 656
Query: 540 MVEKVIAMRHEQVSGKAGRK 559
EK++ + +++ K G K
Sbjct: 657 --EKLLGITIDELLAKKGPK 674
>gi|426397386|ref|XP_004064899.1| PREDICTED: probable global transcription activator SNF2L1 [Gorilla
gorilla gorilla]
Length = 872
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAF--NAPNSSKFIFMLST 574
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 635 RAEIKLRLDSIVI 647
>gi|297304754|ref|XP_002806437.1| PREDICTED: probable global transcription activator SNF2L1-like
[Macaca mulatta]
gi|397496288|ref|XP_003818973.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Pan paniscus]
gi|402911362|ref|XP_003918302.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Papio anubis]
gi|119632241|gb|EAX11836.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_d [Homo
sapiens]
gi|219520696|gb|AAI43955.1| SMARCA1 protein [Homo sapiens]
gi|410340061|gb|JAA38977.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1070
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAF--NAPNSSKFIFMLST 574
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 635 RAEIKLRLDSIVI 647
>gi|297835980|ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
lyrata]
gi|297331712|gb|EFH62131.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
lyrata]
Length = 1721
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 210/565 (37%), Positives = 308/565 (54%), Gaps = 79/565 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EGL++L+ +L NV+L DEMGLGKT+Q++S L +L+ +Q PGPFLV+ PLS
Sbjct: 622 LRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPLS 681
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E K+ P + ++ YVG R R ++ + + K+ + P+ F+ LLTTY
Sbjct: 682 TLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGR-----PIKFNALLTTY 736
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+VVL D+ LS+I W Y ++DEA RLKN + LY L E F +LL+TGTP+QN++ E
Sbjct: 737 EVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLE-FSTKNKLLITGTPLQNSVEE 795
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF P F ++F+ +K+ + + + +L L +LRR +
Sbjct: 796 LWALLHFLDPGKFKNKDEFVENYKNLSSFNES--------ELANLHLELRPHILRRVIKD 847
Query: 277 LVECGHLMLPP------LTEITVLQKKVYASILRKE--------------LPKLLALSSR 316
+ + LPP E++ LQK+ Y IL + L ++ +
Sbjct: 848 VEKS----LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKK 903
Query: 317 TANHQSLQNTA--------------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
NH L +A SGKLV+LD LL +L + HRVL+F+QM +
Sbjct: 904 CCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVR 963
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL ++L LR + ++RLDGS +AE R A+ HF+ A +D F F++ST
Sbjct: 964 MLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFN-----------APASDDFCFLLST 1012
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTV+ ++ DWNPQ D QA+ RAHRIGQ V VT +VEE I+
Sbjct: 1013 RAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILE 1072
Query: 477 RAERKLRLSHNVVGD-----DVVDREVKERTAVETDDLRSII-FGLHLFDPKAINNEESD 530
RA+RK+ L H V+ + RE K+ + + ++L +I+ FG + N+EES
Sbjct: 1073 RAKRKMVLDHLVIQKLNAEGRLEKRETKKGSNFDKNELSAILRFGAEELFKEDKNDEESK 1132
Query: 531 DLRLSGLNSMVEKVIAMRHEQVSGK 555
L SM I R EQV K
Sbjct: 1133 KRLL----SMDIDEILERAEQVEEK 1153
>gi|432097882|gb|ELK27908.1| Chromodomain-helicase-DNA-binding protein 1-like protein, partial
[Myotis davidii]
Length = 881
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 257/722 (35%), Positives = 359/722 (49%), Gaps = 147/722 (20%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+F YL GPFL+LCPLS
Sbjct: 4 LRAYQLEGVNWLAQRFHCQNGCVLGDEMGLGKTCQTIAFFIYLAGRLNDEGPFLILCPLS 63
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V W E+ +F P L + Y G++E+R N++ + + P F VLLTTY
Sbjct: 64 VLSNWKEEIERFAPGLSCVTYTGDKEERANLQPDLRQ-----------KPC-FHVLLTTY 111
Query: 157 DVVL-------MDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+V + ++ G W ++DEA RLKN SS+L+ L E F + LL+TGTP
Sbjct: 112 EVPICSSTARTLNLGPRKFFHWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFNLLLTGTP 170
Query: 210 IQNNLSELWALMHFCMPSVFGT--LNQFLSTFKD---AVHSSSAPK-----RGKIKE--- 256
IQN+L EL++L+ F P +F + F+ +++ S P RG E
Sbjct: 171 IQNSLQELYSLLSFVEPDLFAKEQVEDFVQRYQNIEKEFESGKCPSDKLFPRGLDPETGL 230
Query: 257 -QFTS-LKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELP 308
Q S L +L F+LRR K ++ LP TE+ + LQKK Y +IL K+L
Sbjct: 231 VQIASELHKLLQPFLLRRVKSEVA----TDLPKKTEVVIYHGMSALQKKYYKAILMKDLD 286
Query: 309 KLLALSSRTANHQSLQN------------------------------TASGKLVVLDLLL 338
A + A LQN ASGKL +LD LL
Sbjct: 287 ---AFENEMAKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIAASGKLHLLDKLL 343
Query: 339 KKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIE 398
LY+ GHRVLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER+ AI++F Q
Sbjct: 344 AYLYSRGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERYLAIKNFGQQP--- 400
Query: 399 RLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ
Sbjct: 401 ----------IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAASRAHRIGQNKS 450
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLS-------HNVVGDDVVDREV------------- 498
V I L+ TVEE++ R+A KL+L+ H +G D ++
Sbjct: 451 VKVIRLIGRDTVEEIVCRKAASKLQLTSAIMEGGHFTLGASTADLQLGEILKFGLDKLLS 510
Query: 499 KERTAVETDDLRSIIF----GLHLFD--PKAINNEESDDLRLSGLNSMVEKVIAMRHEQV 552
E + V+ DL SI+ G + D P A EE + G N M ++
Sbjct: 511 SEGSTVDEIDLESILGETKDGQWVSDALPTA---EEGSREQEEGKNHMYLFEGKDYSKEP 567
Query: 553 SGKAGRKFE--VNPVALL-----EESDLLMHESFASATSYPDLDEASYR--------SWV 597
S + + FE VN +L +E LL ++ + P L E S +
Sbjct: 568 SKEDRKSFEQLVNLQKILLEKTGQEGPLLRNK---GSVLMPGLVEGSAKRKRILSPAELE 624
Query: 598 EKFKEASESSSNTIAESGRRRSPEDKQRKLEAARRKAEEKKLAKWEANGYQSLSVKTPVC 657
E+ K+ E+++ RR+ E+K+R+ E K KK+A WE+N YQS + +
Sbjct: 625 ERRKKRQEAAAK------RRKLIEEKKRRKEEVEHK---KKMAWWESNNYQSFCLPSEES 675
Query: 658 SP 659
P
Sbjct: 676 EP 677
>gi|335306519|ref|XP_003360492.1| PREDICTED: probable global transcription activator SNF2L1 isoform 4
[Sus scrofa]
Length = 1061
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 272/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 186 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 245
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 246 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 293
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 294 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 352
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 353 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 403
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 404 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 459
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 460 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+V ++ F+FM+STRAG
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNS-----------SRFIFMLSTRAG 568
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 569 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 628
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 629 IKLRLDSIVI 638
>gi|327264196|ref|XP_003216901.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Anolis
carolinensis]
Length = 887
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 246/694 (35%), Positives = 355/694 (51%), Gaps = 117/694 (16%)
Query: 31 FGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+G+T L P+Q+EG++WL Y +LGDEMGLGKT Q IS L L +++ PF
Sbjct: 29 WGLTGINLHPYQLEGVNWLTHCYGTWHGCILGDEMGLGKTCQTISLLLVLS-GKLNKRPF 87
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
LVLCPLSV + W E+ +F P+L + Y G++E+R +++ ++ SN + F
Sbjct: 88 LVLCPLSVLNNWKEELNRFAPRLSFITYWGDKEERTELQQDIF---------SNNN---F 135
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+LLTTY++ L D FL + W ++DEA RLKN S+L+ L E F LL+TGTP
Sbjct: 136 HILLTTYEICLKDASFLKRFNWACLVVDEAHRLKNEDSLLHKTLSE-FSTDFCLLLTGTP 194
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
IQN+L EL+AL+ F P +F F H K K ++ SL L F+
Sbjct: 195 IQNSLKELYALLTFIEPVIFP--KDLAEKFVHYYHE--VKKESKTAQELHSL---LKPFL 247
Query: 270 LRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALSSRTANHQSL 323
LRR K ++ LP EI + LQ+K Y +IL K+L A + T L
Sbjct: 248 LRRVKSEVAS----ELPKKMEIILYHGMSALQRKFYKAILTKDLD---AFENETGKKARL 300
Query: 324 QNT------------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
QN SGKL +LD LL LY GHRVLLF+Q
Sbjct: 301 QNVLIQLRKCVAHPYLFNGVEPEPFVIGDHLIEVSGKLNLLDNLLAFLYAGGHRVLLFSQ 360
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MT LDILQD+++ R YSYERLDGS+R EER AI++F Q FVF+
Sbjct: 361 MTNMLDILQDYMDYRGYSYERLDGSVRGEERHLAIKNFGQQPI-------------FVFL 407
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGGVG+NL +ADTV+F + D+NPQ D QA+ RAHRIGQ V I L+ T+EE+
Sbjct: 408 LSTRAGGVGMNLTSADTVVFVDNDFNPQNDLQAIARAHRIGQNKPVKIIRLIGRDTIEEI 467
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLR-SIIFGLHLFDPKAINNEESDDL 532
I RRA KL+L++ ++ + + + ETD+++ S I L +++ D+
Sbjct: 468 IYRRAASKLQLTNTIIEGGQF--ALGTQKSQETDNIQLSEILKFGLDKLLSLDGSTICDV 525
Query: 533 RLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPD----- 587
L + + I + +S G + E N ++L L + ++ + D
Sbjct: 526 DLGNILGETREGIWVMDPVLSTTDGNE-EQNLESMLSHMYLYEGKDYSKEVTREDQKAFD 584
Query: 588 ---------LDEASYRSWVEKFKEASESSSNTIAESGRRR--SPED---KQRKL-EAARR 632
L++ S + K A+ S + S +R+ SPE+ ++RK+ EAA R
Sbjct: 585 QLLDLQKVLLEDVSQEGRALRNK-ANVLVSIEMGPSKKRQKLSPEELEARRRKVQEAAAR 643
Query: 633 KA--------------EEKKLAKWEANGYQSLSV 652
+A ++KK+A WEAN Y+S +
Sbjct: 644 RARIKEEQRQKKAEAEDQKKMAWWEANHYRSCCL 677
>gi|301766464|ref|XP_002918637.1| PREDICTED: probable global transcription activator SNF2L1-like
isoform 2 [Ailuropoda melanoleuca]
Length = 1042
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 273/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLYNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+V ++ + F+FM+STRAG
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNS-----------NKFIFMLSTRAG 565
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 566 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 625
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 626 IKLRLDSIVI 635
>gi|2213862|gb|AAC47719.1| PfSNF2L [Plasmodium falciparum]
Length = 1422
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/492 (38%), Positives = 277/492 (56%), Gaps = 67/492 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
+ +KP+Q+EGL+WL + Y +N +L DEMGLGKTLQ IS L YL+F++ ++
Sbjct: 314 NINGTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIKKKSII 373
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+CP S D W E+ K+ ++ +Y G ++QR+ + R N+ FDV
Sbjct: 374 ICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNR-------------NLLHSDFDV 420
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP-RRLLMTGTPI 210
LLTTY++V+ D+ L I W + +IDEA R+KN SVL + +R FL RLL+TGTP+
Sbjct: 421 LLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVR--FLRSENRLLITGTPL 478
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
NNL ELW+L++F MP +F +F + F + S++ K+ +I T L IL FML
Sbjct: 479 HNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEI---ITQLHTILKPFML 535
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS--------- 315
RR K ++ + LPP EI + LQKK+Y+ IL K + L A++
Sbjct: 536 RRLKVEVEQS----LPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKNQMLNIL 591
Query: 316 ----RTANHQSLQN--------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + SGK+ +LD LL +L RVLLF+QMT+
Sbjct: 592 MQLRKCCNHPYLFDGIEEPPYIEGNHLIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRL 651
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+ D+ + Y Y R+DGS +ER I F+ ++ F+F++STR
Sbjct: 652 LDIIDDYCRWKNYPYLRIDGSTPGDERQVRINQFNEPNS-----------KYFIFLLSTR 700
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI ++ D+NPQ+D QA+ RAHRIGQ V+ VT+++VEE I+ R
Sbjct: 701 AGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVER 760
Query: 478 AERKLRLSHNVV 489
A +KL+L ++
Sbjct: 761 AAKKLKLDSLII 772
>gi|238881028|gb|EEQ44666.1| chromatin remodelling complex ATPase chain ISW1 [Candida albicans
WO-1]
Length = 1056
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/516 (37%), Positives = 291/516 (56%), Gaps = 70/516 (13%)
Query: 15 HDNDERDGQTPV--DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQA 72
H +DE D Q V ++ + +L+ +Q++GL+WLI Y ++ +L DEMGLGKTLQ
Sbjct: 116 HQDDE-DHQHTVMTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQT 174
Query: 73 ISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY 132
ISFL YL++ + GPF+V+ P S D W E AK+TP + V+ G++EQR +I
Sbjct: 175 ISFLGYLRYIKHIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASI----- 229
Query: 133 EHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNV 192
+K+Q + FDVL+T+++++L ++ L + W Y ++DEA R+KN S L +
Sbjct: 230 --IKDQ-----LYTAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKI 282
Query: 193 LREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRG 252
+R F RLL+TGTP+QNNL ELWAL++F +P VFG +QF F D +S +
Sbjct: 283 IR-LFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAF-DNQNSEELDEEE 340
Query: 253 KIKEQ---FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILR 304
K + Q + L +LS F+LRR K + +LP + +T +Q + Y +L
Sbjct: 341 KQRRQDKAVSELHQLLSPFLLRRVK---ADVEKSLLPKIETNVYIGMTDMQVEWYKRLLE 397
Query: 305 KEL-------------PKLLALS---SRTANHQSLQNTA---------------SGKLVV 333
K++ +LL + + NH L + A SGK+++
Sbjct: 398 KDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSGKMII 457
Query: 334 LDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSV 393
LD +LKK G RVL+F+QM++ LDIL+D+ R Y Y R+DGS E+R AI ++
Sbjct: 458 LDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYN- 516
Query: 394 QSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRI 453
A ++ F+F+++TRAGG+G+NL +AD VI Y+ DWNPQ D QA+ RAHRI
Sbjct: 517 ----------APDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRI 566
Query: 454 GQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
GQ V VTE +EE ++ RA +KLRL V+
Sbjct: 567 GQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVI 602
>gi|335306514|ref|XP_003360490.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Sus scrofa]
Length = 1045
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 272/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 186 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 245
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 246 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 293
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 294 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 352
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 353 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 403
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 404 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 459
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 460 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+V ++ F+FM+STRAG
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNS-----------SRFIFMLSTRAG 568
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 569 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 628
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 629 IKLRLDSIVI 638
>gi|21071044|ref|NP_003060.2| probable global transcription activator SNF2L1 isoform a [Homo
sapiens]
gi|397496290|ref|XP_003818974.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Pan paniscus]
gi|402911366|ref|XP_003918304.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Papio anubis]
gi|115311627|sp|P28370.2|SMCA1_HUMAN RecName: Full=Probable global transcription activator SNF2L1;
AltName: Full=ATP-dependent helicase SMARCA1; AltName:
Full=Nucleosome-remodeling factor subunit SNF2L;
AltName: Full=SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 1
gi|109658918|gb|AAI17448.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Homo sapiens]
gi|119632240|gb|EAX11835.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_c [Homo
sapiens]
gi|384948910|gb|AFI38060.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|387540732|gb|AFJ70993.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|410221930|gb|JAA08184.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
gi|410253108|gb|JAA14521.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
gi|410340065|gb|JAA38979.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1054
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAF--NAPNSSKFIFMLST 574
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 635 RAEIKLRLDSIVI 647
>gi|68479793|ref|XP_716066.1| hypothetical protein CaO19.7401 [Candida albicans SC5314]
gi|46437717|gb|EAK97058.1| hypothetical protein CaO19.7401 [Candida albicans SC5314]
Length = 1056
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/516 (37%), Positives = 291/516 (56%), Gaps = 70/516 (13%)
Query: 15 HDNDERDGQTPV--DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQA 72
H +DE D Q V ++ + +L+ +Q++GL+WLI Y ++ +L DEMGLGKTLQ
Sbjct: 116 HQDDE-DHQHTVMTESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQT 174
Query: 73 ISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY 132
ISFL YL++ + GPF+V+ P S D W E AK+TP + V+ G++EQR +I
Sbjct: 175 ISFLGYLRYIKHIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASI----- 229
Query: 133 EHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNV 192
+K+Q + FDVL+T+++++L ++ L + W Y ++DEA R+KN S L +
Sbjct: 230 --IKDQ-----LYTAKFDVLITSFEMILREKSALQKFRWEYIVVDEAHRIKNEDSSLSKI 282
Query: 193 LREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRG 252
+R F RLL+TGTP+QNNL ELWAL++F +P VFG +QF F D +S +
Sbjct: 283 IR-LFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDQFDEAF-DNQNSEELDEEE 340
Query: 253 KIKEQ---FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILR 304
K + Q + L +LS F+LRR K + +LP + +T +Q + Y +L
Sbjct: 341 KQRRQDKAVSELHQLLSPFLLRRVK---ADVEKSLLPKIETNVYIGMTDMQVEWYKRLLE 397
Query: 305 KEL-------------PKLLALS---SRTANHQSLQNTA---------------SGKLVV 333
K++ +LL + + NH L + A SGK+++
Sbjct: 398 KDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSGKMII 457
Query: 334 LDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSV 393
LD +LKK G RVL+F+QM++ LDIL+D+ R Y Y R+DGS E+R AI ++
Sbjct: 458 LDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYN- 516
Query: 394 QSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRI 453
A ++ F+F+++TRAGG+G+NL +AD VI Y+ DWNPQ D QA+ RAHRI
Sbjct: 517 ----------APDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRI 566
Query: 454 GQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
GQ V VTE +EE ++ RA +KLRL V+
Sbjct: 567 GQKKQVKVFRFVTEKAIEEKVLERAAQKLRLDQLVI 602
>gi|292498|gb|AAA80560.1| transcription activator, partial [Homo sapiens]
Length = 769
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAF--NAPNSSKFIFMLST 574
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 635 RAEIKLRLDSIVI 647
>gi|410304366|gb|JAA30783.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1053
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAF--NAPNSSKFIFMLST 574
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 635 RAEIKLRLDSIVI 647
>gi|355757682|gb|EHH61207.1| Putative global transcription activator SNF2L1, partial [Macaca
fascicularis]
Length = 995
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 124 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 183
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 184 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 231
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 232 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 290
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 291 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 341
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 342 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 397
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 398 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 457
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 458 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAF--NAPNSSKFIFMLST 515
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 516 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 575
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 576 RAEIKLRLDSIVI 588
>gi|380815784|gb|AFE79766.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|384948908|gb|AFI38059.1| putative global transcription activator SNF2L1 isoform a [Macaca
mulatta]
gi|410340059|gb|JAA38976.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1048
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAF--NAPNSSKFIFMLST 574
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 635 RAEIKLRLDSIVI 647
>gi|348552948|ref|XP_003462289.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription
activator SNF2L1-like [Cavia porcellus]
Length = 1048
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 272/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 189 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRSIPGPHMVLVPKS 248
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 249 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 296
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 297 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 355
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ +R L +L F+LRR K
Sbjct: 356 LWALLNFLLPDVFNSADDFDSWFDTKNCFGDQKLVER---------LHAVLKPFLLRRIK 406
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 407 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 462
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL +L + G RVL+F+QMT+ LD
Sbjct: 463 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLARLKDQGSRVLIFSQMTRLLD 522
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+V ++ F+FM+STRAG
Sbjct: 523 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNS-----------SKFIFMLSTRAG 571
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 572 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 631
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 632 IKLRLDSIVI 641
>gi|119632239|gb|EAX11834.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_b [Homo
sapiens]
Length = 1029
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 271/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 154 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 213
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 214 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 261
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 262 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 320
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 321 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 371
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 372 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 427
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 428 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 487
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 488 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN-----------APNSSKFIFMLSTRAG 536
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 537 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 596
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 597 IKLRLDSIVI 606
>gi|338729558|ref|XP_003365923.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Equus caballus]
Length = 1045
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 272/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 186 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 245
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 246 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 293
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 294 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 352
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 353 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHTVLKPFLLRRIK 403
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 404 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 459
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 460 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+V ++ F+FM+STRAG
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNS-----------SKFIFMLSTRAG 568
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 569 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 628
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 629 IKLRLDSIVI 638
>gi|355705138|gb|EHH31063.1| Putative global transcription activator SNF2L1, partial [Macaca
mulatta]
Length = 996
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 125 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 184
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 185 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 232
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 233 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 291
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 292 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 342
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 343 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 398
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 399 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 458
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 459 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAF--NAPNSSKFIFMLST 516
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 517 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 576
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 577 RAEIKLRLDSIVI 589
>gi|449281262|gb|EMC88383.1| Chromodomain-helicase-DNA-binding protein 2 [Columba livia]
Length = 1719
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 223/611 (36%), Positives = 333/611 (54%), Gaps = 99/611 (16%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFLV+ PL
Sbjct: 481 ELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPL 540
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P++ V+ Y+G+ R IR YE + QS+ L F+ L+TT
Sbjct: 541 STLTSWQREFEVWAPEINVVVYIGDLMSRNMIRE--YEWIHSQSKR-----LKFNALITT 593
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+QN+L
Sbjct: 594 YEILLKDKAVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQNSLK 652
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFMLRRTK 274
ELW+L+HF MP F +F F++ GK +E + SL +L F+LRR K
Sbjct: 653 ELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLLRRVK 700
Query: 275 QKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR---------------T 317
+ + + + + E++ LQK+ Y IL + K L+ +R
Sbjct: 701 KDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALSKGTRGSTSGFLNIVMELKKC 759
Query: 318 ANH----------------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH ++LQ+ +SGKL++LD LL +L + G+RVL+F+QM + LD
Sbjct: 760 CNHCYLIKPPEENERENGLETLQSLIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLD 819
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++STRAG
Sbjct: 820 ILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLSTRAG 868
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+ RA+
Sbjct: 869 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAK 928
Query: 480 RKLRLSHNVV------GDDVVDREVKERTA--VETDDLRSII-FGLH-LFDPKAINNEES 529
+K+ L H V+ G V+D + ++L +I+ FG LF K + EES
Sbjct: 929 KKMVLDHLVIQRMDTTGRTVLDNNSGRSNSNPFNKEELTAILKFGAEDLF--KELEGEES 986
Query: 530 DDLRLSGLNSMVEKVIAMRHEQVSGKAG----RKFEVNPVALLEESDLLMHESFASATSY 585
+ + ++ ++ ++ R +VS A +F+V A +E+ +
Sbjct: 987 EPQEMD-IDEIL-RLAETRENEVSTSATDELLSQFKVANFATMEDEE------------- 1031
Query: 586 PDLDEASYRSW 596
P+LDE S + W
Sbjct: 1032 PELDERSQKDW 1042
>gi|292496|gb|AAA80559.1| transcription activator [Homo sapiens]
Length = 976
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 105 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 164
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 165 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 212
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 213 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 271
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 272 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 322
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 323 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 378
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 379 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 438
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 439 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAF--NAPNSSKFIFMLST 496
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 497 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 556
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 557 RAEIKLRLDSIVI 569
>gi|211828096|gb|AAH51825.2| SMARCA1 protein [Homo sapiens]
Length = 965
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 271/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 120 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 179
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 180 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 227
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 228 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 286
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 287 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 337
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 338 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 393
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 394 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 453
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 454 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN-----------APNSSKFIFMLSTRAG 502
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 503 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 562
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 563 IKLRLDSIVI 572
>gi|380815786|gb|AFE79767.1| putative global transcription activator SNF2L1 isoform b [Macaca
mulatta]
gi|410340063|gb|JAA38978.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1036
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 271/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN-----------APNSSKFIFMLSTRAG 565
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 566 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 625
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 626 IKLRLDSIVI 635
>gi|392338968|ref|XP_003753691.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform
2 [Rattus norvegicus]
gi|392345929|ref|XP_003749407.1| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform
2 [Rattus norvegicus]
Length = 898
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 249/704 (35%), Positives = 346/704 (49%), Gaps = 125/704 (17%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D E+G+T L+ +Q+EG++WL++ + +LGDEMGLGKT Q I+ L YL
Sbjct: 29 DLQEWGLTGIRLRSYQLEGVNWLVQCFHGQNGCILGDEMGLGKTCQTIALLIYLVGRLND 88
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R RR + ++++S
Sbjct: 89 EGPFLILCPLSVLSNWKEEMERFAPGLSCVTYTGDKEER--ARRQ--QDLRQESG----- 139
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE--HFLMPRRL 203
F VLLTTY++ L D FL W +DEA RLKN SS+L+ L E F + RL
Sbjct: 140 ---FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEVFEFSVVFRL 196
Query: 204 LMTGTPIQNNLSELWALMHFCMPSVFG--TLNQFLSTFKDAVHSSSAPKRGKIKEQFTSL 261
L+TGTPIQN+L EL++L+ P +F + F+ ++D S + + L
Sbjct: 197 LLTGTPIQNSLQELYSLLSVVEPDLFCREQVEDFVQCYQDIEKESKSASELHRLLRPFLL 256
Query: 262 KGILSAFMLRRTKQKLVECGHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRTANHQ 321
+ + + K+ V H M + LQKK Y +IL K+L A + TA
Sbjct: 257 RRVKAQVATELPKKTEVVIYHGM-------SALQKKYYKAILMKDLD---AFENETAKKV 306
Query: 322 SLQNT------------------------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
LQN ASGKL +LD LL LY+ GHRVLLF
Sbjct: 307 KLQNVLTQLRKCVDHPYLFDGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLF 366
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT LDILQD+++ R YSYER+DGS+R EER AI++F G FV
Sbjct: 367 SQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GKQPIFV 413
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVE
Sbjct: 414 FLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVE 473
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLFDPKAINNEES- 529
E++ R+A KL+L++ V+ ++ A L I+ FGL K +++E S
Sbjct: 474 EIVYRKAASKLQLTNMVIEGGHFTLGAQKPAAEADLQLSEILKFGLD----KLLSSEGSS 529
Query: 530 -DDLRLSGL-----------NSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHE 577
D++ L + +++ EQ GK N + L E D
Sbjct: 530 MDEIDLKSILGETKDGQWTPDALPAAAEGESREQEEGK-------NHMYLFEGRDYSKEP 582
Query: 578 SFASATSYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDK 623
S S+ L ++ +EK S N +AE +R SP ED+
Sbjct: 583 SKEDRKSFEQLVNLQ-KTLLEKTSHGGRSLRNKGSVLIPGLAEGPIKRKKILSPEELEDR 641
Query: 624 QRKLEAA---------------RRKAEEKKLAKWEANGYQSLSV 652
Q+K + A KK+A WE+NGYQS +
Sbjct: 642 QKKRQEAAAKRKKLMEEKKKAKEEAEHRKKMAWWESNGYQSFCL 685
>gi|268567385|ref|XP_002639966.1| Hypothetical protein CBG10790 [Caenorhabditis briggsae]
Length = 1463
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 194/491 (39%), Positives = 279/491 (56%), Gaps = 71/491 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+ +Q+EGL+W+I + G + +L DEMGLGKT+Q+IS L+ L GP+LV+ PL
Sbjct: 417 KLRDYQLEGLNWMIYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPL 476
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E A++ P + ++ Y+G+ R IR+ YE + + + +LTT
Sbjct: 477 STMAAWQKEFAQWAPDINLIIYMGDVVSRDMIRQ--YEWF-----VGGTKKMKVNAILTT 529
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FLS + W ++DEA RLKN S+LY L + F +LL+TGTP+QN+L
Sbjct: 530 YEILLKDKAFLSSVDWAALLVDEAHRLKNDESLLYKCLIQ-FRFNHKLLITGTPLQNSLK 588
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F +F + ++ H ++L L F+LRR K+
Sbjct: 589 ELWALLHFIMPEKFDCWEEFETAHNESNHKG-----------ISALHKKLEPFLLRRVKK 637
Query: 276 KLVECGHLMLPPLTE------ITVLQKKVYASILRK---ELPK-----------LLALSS 315
+ + LPP TE +T QK+ Y IL K EL K L+
Sbjct: 638 DVEKS----LPPKTEQILRVDMTAHQKQFYKWILTKNYRELSKGVKGSINGFVNLVMELK 693
Query: 316 RTANHQSLQN-----------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH SL +SGKL++LD LL +L + GHRVL+F+QM L
Sbjct: 694 KCCNHASLTRQYDYIYDDAQGRLQQLLKSSGKLILLDKLLCRLRDKGHRVLIFSQMVMML 753
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DILQ++L+LR++ +RLDGS+RA+ R A+ H++ A G+ F F++STRA
Sbjct: 754 DILQEYLQLRRFPSQRLDGSMRADLRKQALDHYN-----------APGSTDFAFLLSTRA 802
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V LVT+ +VEE I+ RA
Sbjct: 803 GGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVERA 862
Query: 479 ERKLRLSHNVV 489
+RKL L H V+
Sbjct: 863 KRKLVLDHLVI 873
>gi|410304364|gb|JAA30782.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1041
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 271/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN-----------APNSSKFIFMLSTRAG 565
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 566 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 625
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 626 IKLRLDSIVI 635
>gi|320580373|gb|EFW94596.1| chromatin remodelling complex ATPase chain ISW1 [Ogataea
parapolymorpha DL-1]
Length = 1018
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 303/540 (56%), Gaps = 71/540 (13%)
Query: 11 AKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTL 70
A++IHD + + T + + + +L+ +Q++GL+WLI Y ++ +L DEMGLGKTL
Sbjct: 94 AELIHDEEYEEETTVLTESPSYIQGKLRDYQIQGLNWLISLYENRLSGILADEMGLGKTL 153
Query: 71 QAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRT 130
Q ISFL +L++ + GPF+V+ P S D W E A++TP++ VL G +E+R
Sbjct: 154 QTISFLGFLRYYKGIDGPFIVVVPKSTLDNWRREFARWTPEVNVLVLQGTKEERA----- 208
Query: 131 MYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLY 190
E + ++ ++ FDV +T++++V+ ++ L +I W Y +IDEA R+KN S L
Sbjct: 209 --ELINDKLMQAD-----FDVCITSFEMVIREKSKLGKIRWEYIVIDEAHRIKNEESALS 261
Query: 191 NVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPK 250
++R F RLL+TGTP+QNNL ELWAL++F +P VFG F F+ S
Sbjct: 262 QIIR-VFYSKHRLLITGTPLQNNLHELWALLNFILPDVFGDDEVFNEWFE----SQGEED 316
Query: 251 RGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRK 305
+ ++ ++ L +LS F+LRR K + + +LP + +T +Q K Y ++L K
Sbjct: 317 QDQVVQK---LHKVLSPFLLRRVKSDVEKS---LLPKIETNVYVGMTDMQIKWYRNLLEK 370
Query: 306 EL-------------PKLLALS---SRTANHQSLQNTA---------------SGKLVVL 334
++ +LL + + NH L A SGK++VL
Sbjct: 371 DIDAVNGAIGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNSGKMIVL 430
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LLKKL + G RVL+F+QM++ LDIL+D+ LR Y Y R+DGS EER +I F+
Sbjct: 431 DKLLKKLQSEGSRVLIFSQMSRLLDILEDYCYLRGYQYCRIDGSTAHEERIQSIDDFN-- 488
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
G+D F+F+++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIG
Sbjct: 489 ---------KPGSDKFIFLLTTRAGGLGINLTTADAVVLYDSDWNPQADLQAMDRAHRIG 539
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVET-DDLRSII 513
Q V VTE+ +EE ++ RA +KLRL V+ + + +T T DDL +I
Sbjct: 540 QKKQVKVFRFVTENAIEEKVLERAAQKLRLDQLVIQQGRANNKATSQTIGNTKDDLLGMI 599
>gi|164419749|ref|NP_620604.2| probable global transcription activator SNF2L1 isoform b [Homo
sapiens]
gi|397496286|ref|XP_003818972.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Pan paniscus]
gi|402911364|ref|XP_003918303.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Papio anubis]
gi|384948912|gb|AFI38061.1| putative global transcription activator SNF2L1 isoform b [Macaca
mulatta]
gi|387540730|gb|AFJ70992.1| putative global transcription activator SNF2L1 isoform b [Macaca
mulatta]
gi|410221928|gb|JAA08183.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
gi|410253106|gb|JAA14520.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Pan troglodytes]
Length = 1042
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 271/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN-----------APNSSKFIFMLSTRAG 565
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 566 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 625
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 626 IKLRLDSIVI 635
>gi|170031684|ref|XP_001843714.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus]
gi|167870885|gb|EDS34268.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus]
Length = 2039
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 210/553 (37%), Positives = 306/553 (55%), Gaps = 78/553 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+ +Q++GL+WLI + +V+L DEMGLGKT+Q I FL YL +Q GPFL + PL
Sbjct: 605 KLRDYQMDGLNWLILTWCKENSVILADEMGLGKTIQTICFLYYLFKAQQLYGPFLCVVPL 664
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E A + P++ V+ Y+G+ R IR+ YE SN L F+ +LTT
Sbjct: 665 STMTAWQREFAIWAPEMNVVTYLGDVPSREIIRQ--YEWC-----FSN-QKLKFNAILTT 716
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL I W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 717 YEILLKDKTFLGSISWAALLVDEAHRLKNDDSLLYKALKE-FDTNYRLLITGTPLQNSLK 775
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F + + F + + + S + L L ++LRR K+
Sbjct: 776 ELWALLHFIMPDRFESWDAFDRLYGNTTNDKS----------YCKLHKELEPYILRRIKK 825
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRK---------------------ELPKLL- 311
+ + + + E+T +Q++ Y IL K EL K
Sbjct: 826 DVEKSLPAKVEQILRVEMTSIQRQYYRWILTKNFDALRKGMKGSINTFLNIVIELKKCCN 885
Query: 312 -ALSSRTANHQSLQN---------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
AL +R ++ N SGKLV+LD LL +L +GHRVL+F+QM + LDIL
Sbjct: 886 HALLTRPTEFETQTNQDEVVVQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDIL 945
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
++L+ R +S++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG+
Sbjct: 946 AEYLQKRHFSFQRLDGSIKGELRKQALDHFNAE-----------GSTDFCFLLSTRAGGL 994
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++K
Sbjct: 995 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTAKSVEEDIVERAKKK 1054
Query: 482 LRLSHNVV------GDDVVDREVKERTA--VETDDLRSII-FGL-HLFDPKAINNEESDD 531
+ L H V+ G V+D+ TA D+L +I+ FG LF +E+ DD
Sbjct: 1055 MVLDHLVIQRMDTTGRTVLDKNGANNTANPFNKDELSAILKFGAEELFK----EDEDGDD 1110
Query: 532 LRLSGLNSMVEKV 544
+ ++ ++++
Sbjct: 1111 ELVCDIDEILKRA 1123
>gi|296236368|ref|XP_002807959.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription
activator SNF2L1-like [Callithrix jacchus]
Length = 1080
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFRGQREAIEAF--NAPNSSKFIFMLST 574
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 635 RAEIKLRLDSIVI 647
>gi|119632238|gb|EAX11833.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_a [Homo
sapiens]
Length = 946
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 198/490 (40%), Positives = 271/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 105 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 164
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 165 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 212
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 213 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 271
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 272 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 322
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 323 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 378
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 379 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 438
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 439 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN-----------APNSSKFIFMLSTRAG 487
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 488 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 547
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 548 IKLRLDSIVI 557
>gi|219121827|ref|XP_002181260.1| imitation switch isoform 1, alias nucleosome remodeling factor 140
kDa subunit [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407246|gb|EEC47183.1| imitation switch isoform 1, alias nucleosome remodeling factor 140
kDa subunit [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1023
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 204/516 (39%), Positives = 286/516 (55%), Gaps = 70/516 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
+ P+Q+EGL+WLI+ + G+N +L DEMGLGKTLQ IS L+YL+ S+ G +V+ P S
Sbjct: 149 MHPYQLEGLNWLIKLHDHGINGILADEMGLGKTLQTISLLAYLRESRGVRGAHMVIVPKS 208
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMS-NVSPLPFDVLLTT 155
V W+ E K+ P ++ +R G +++R+ V E + N FDVL+T+
Sbjct: 209 VVGNWIREFKKWCPSIKAIRMGGTKDERQKF-------VTEDLPLDPNTGKRKFDVLVTS 261
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+ +L ++G LS+IPW Y IIDEA R+KN +S L V+R RLL+TGTP+QNNL
Sbjct: 262 YEGLLREKGKLSRIPWKYVIIDEAHRIKNENSSLSKVVRT-MKTEFRLLITGTPLQNNLR 320
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL++F MP +FG QF F + ++ K IK+ L IL FMLRR K+
Sbjct: 321 ELWALLNFLMPDIFGDAEQFDEWFS---LTDASGKENVIKK----LHTILRPFMLRRVKK 373
Query: 276 KLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS-------------- 315
+ LPP E +T +Q++ Y L+K+ +L L
Sbjct: 374 DVATS----LPPKKETKLYIGLTKMQQEWYVRCLQKDAHELNKLGGPDRNRLLNVLMQLR 429
Query: 316 RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
+ NH L + A SGK+ ++ LL KL G RVL+F QMT+ LDI
Sbjct: 430 KVCNHPYLFDGAEQGPPYIDGPHLWENSGKMQLMHKLLPKLQAKGSRVLIFCQMTRVLDI 489
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L+D+ L K Y R+DG+ E R + + F+ A G+ F F++STRAGG
Sbjct: 490 LEDYFRLTKLEYCRIDGNTDGERRDSQMDEFN-----------AEGSSKFAFLLSTRAGG 538
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V VTE TVEE I+ RA+R
Sbjct: 539 LGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQTKPVQVFRFVTEGTVEEKIIERADR 598
Query: 481 KLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FG 515
KL L V+ R ++ +++E DL ++ FG
Sbjct: 599 KLFLDAAVIQQ---GRLAEQHSSLEKGDLMKMVRFG 631
>gi|452821607|gb|EME28635.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 1026
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 206/549 (37%), Positives = 306/549 (55%), Gaps = 75/549 (13%)
Query: 24 TPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQ 83
T + + + V ++P+Q+EGL++LI Y G+N +L DEMGLGKTLQ IS L++L+ +
Sbjct: 128 TRLTSQPYNVKGTMRPYQLEGLNFLIGLYEHGLNGILADEMGLGKTLQTISLLAFLRGYR 187
Query: 84 MSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSN 143
GP L++ P S W E K+ P +LR+ G ++ R N+ KEQ +S
Sbjct: 188 HINGPHLIIVPKSTIGNWALEFDKWCPSFNILRFHGNQDDRANL--------KEQRLLSK 239
Query: 144 VSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRL 203
FDV LTTY+V + ++ L + W Y IIDEA R+KN +S+L V+R F RL
Sbjct: 240 ----DFDVCLTTYEVAIKEKNSLRRFMWRYVIIDEAHRIKNENSILSQVVRT-FESQSRL 294
Query: 204 LMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
L+TGTP+QNNL ELWAL++F +P +F + F S F +V S + + ++ +Q L
Sbjct: 295 LLTGTPLQNNLHELWALLNFLLPDIFASAEDFDSWFS-SVESDNENAKNEVIQQ---LHA 350
Query: 264 ILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKE----------- 306
+L F++RR K E H LPP T+++ +Q +Y ++L+K+
Sbjct: 351 VLRPFLIRRLKS---EVEH-DLPPKKETVLFTKLSSVQLDIYRNLLKKDIDAINGPGGDR 406
Query: 307 --LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVL 349
L +L + NH L + + GKL++LD LL +L H+VL
Sbjct: 407 VRLLNILMQLRKCCNHPYLFDGVEDRSLDPFGEHVIESCGKLMLLDKLLSRLRRGNHKVL 466
Query: 350 LFAQMTQTLDILQDFL--ELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
+F+QMT+ LDIL+D+ +R Y Y R+DG+ E R + I F+ +
Sbjct: 467 IFSQMTRMLDILEDYCSPNMRDYPYCRIDGNTEGEIRDSMIEEFNRPDS----------- 515
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
D F+F++STRAGG+G+NL AADTVI Y+ DWNPQVD QA+ RAHRIGQ N V L++E
Sbjct: 516 DKFIFLLSTRAGGLGINLAAADTVILYDSDWNPQVDLQAMDRAHRIGQKNPVNVYRLISE 575
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF---DPKA 523
+TVEE I+R+A KL+L V+ R V ++ + D+L +I +G F D
Sbjct: 576 NTVEERILRKALEKLKLDSLVIQQ---GRLVDQKKQLGKDELLDMIRYGADQFFRVDAAD 632
Query: 524 INNEESDDL 532
NE+ D++
Sbjct: 633 YRNEDLDEI 641
>gi|410989351|ref|XP_004000925.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Felis catus]
Length = 1061
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 272/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 186 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 245
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P + V+ +VG+++ R R + P +DV +T+Y
Sbjct: 246 TLYNWMNEFKRWVPSVRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 293
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 294 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 352
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 353 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 403
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 404 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 459
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 460 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+V ++ F+FM+STRAG
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNS-----------SKFIFMLSTRAG 568
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 569 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 628
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 629 IKLRLDSIVI 638
>gi|164655795|ref|XP_001729026.1| hypothetical protein MGL_3814 [Malassezia globosa CBS 7966]
gi|159102915|gb|EDP41812.1| hypothetical protein MGL_3814 [Malassezia globosa CBS 7966]
Length = 1053
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 195/512 (38%), Positives = 283/512 (55%), Gaps = 90/512 (17%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
+K +Q++GL+WLI Y G+N +L DEMGLGKTLQ ISFL YLK + +PG LV+ P S
Sbjct: 153 MKDYQIQGLNWLISLYHNGINGILADEMGLGKTLQTISFLGYLKHYRNTPGLHLVVVPKS 212
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
D WV E K+ P ++ G +E+R + ++E + P FDVL+TTY
Sbjct: 213 TLDNWVREFHKWVPGFRIVTLQGSKEERHAL---IHE---------RILPQAFDVLVTTY 260
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L ++ L ++ W Y +IDEA R+KN S L ++R F RLL+TGTP+QNNL E
Sbjct: 261 EMCLREKPTLQKLSWEYIVIDEAHRIKNVDSALSQIVRA-FTSRSRLLITGTPLQNNLME 319
Query: 217 LWALMHFCMPSVFGTLNQFLSTFK---------------DAV-------HSSSAPKRGKI 254
LW+L++F +P VF + + F + F+ DA+ H A + G I
Sbjct: 320 LWSLLNFLLPDVFSSADDFEAWFQRKGDTGAETSKADDADAIEAKPKDDHEDDADRHGSI 379
Query: 255 KEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELP 308
+Q L +L F+LRR K + + L P EI V +Q+K Y S+L K++
Sbjct: 380 VQQ---LHKVLRPFLLRRVKADVEQS----LLPKKEINVFVGLSDMQRKWYKSLLEKDIE 432
Query: 309 KLL-ALSSR---------------TANHQSLQNTA---------------SGKLVVLDLL 337
+ ALS + NH L + A SGK+ +LD L
Sbjct: 433 AVNGALSKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSGKMDILDKL 492
Query: 338 LKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAI 397
L+K+ G RVL+F QM++ LDIL+D+ R+Y+Y R+DGS E+R AAI ++ +
Sbjct: 493 LRKMKERGSRVLIFCQMSRMLDILEDYCLFREYTYCRIDGSSVHEDRIAAIDEYNRPDS- 551
Query: 398 ERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMN 457
D F+F+++TRAGG+G+NL +AD V+ ++ DWNPQ D QA+ RAHRIGQ
Sbjct: 552 ----------DKFLFLLTTRAGGLGINLTSADVVVLFDSDWNPQADLQAMDRAHRIGQKK 601
Query: 458 HVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
V VT+H++EE I+ RA +KLRL V+
Sbjct: 602 QVFVYRFVTDHSIEERILERAAQKLRLDQLVI 633
>gi|157103787|ref|XP_001648130.1| helicase [Aedes aegypti]
gi|108880485|gb|EAT44710.1| AAEL003968-PA [Aedes aegypti]
Length = 1027
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 203/536 (37%), Positives = 296/536 (55%), Gaps = 78/536 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
T E++ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + +PGP +V+
Sbjct: 138 TGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKNFRNNPGPHIVIV 197
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E ++ P L + +G++E R R + + P +DV +
Sbjct: 198 PKSTLQNWVNEFGRWCPSLRAVCLIGDQETRNAFIRDV------------LMPGEWDVCI 245
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 246 TSYEMCIREKAVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLLTGTPLQNN 304
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P +F + + F S F ++ K+ E+ L +L F+LRR
Sbjct: 305 LHELWALLNFLLPDIFNSADDFDSWF----DANECIGDNKLIER---LHAVLKPFLLRRL 357
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K ++ + L P E+ + +Q++ Y IL K+ L +L
Sbjct: 358 KSEVEK----RLLPKKEVKIFVGLSKMQREWYTKILMKDIDIVNGAGKMEKMRLQNILMQ 413
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ L
Sbjct: 414 LRKCTNHPYLFDGAEPGPPYTTDYHLLENSGKMVVLDKLLTKLQEQGSRVLVFSQMTRML 473
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y Y RLDG E+R I ++ +++ F+FM+STRA
Sbjct: 474 DILEDYCYWRGYQYCRLDGQTPHEDRTKMIDEYNAENS-----------SKFIFMLSTRA 522
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE+TVEE I+ RA
Sbjct: 523 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERA 582
Query: 479 ERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNEESDD 531
E KL+L V+ +VD + + + D++ +II FG H+F K ++E +DD
Sbjct: 583 EIKLKLDKLVIQQGRLVDNKTNQ---LNKDEMLNIIRFGANHVFQSK--DSEITDD 633
>gi|403279221|ref|XP_003931158.1| PREDICTED: probable global transcription activator SNF2L1 [Saimiri
boliviensis boliviensis]
Length = 976
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 105 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 164
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 165 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 212
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 213 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 271
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 272 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 322
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 323 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 378
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 379 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 438
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 439 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFRGQREAIEAF--NAPNSSKFIFMLST 496
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 497 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 556
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 557 RAEIKLRLDSIVI 569
>gi|395848673|ref|XP_003796973.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Otolemur garnettii]
Length = 1042
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 271/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLYNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEVKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVTNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN-----------APNSSKFIFMLSTRAG 565
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 566 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 625
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 626 IKLRLDSIVI 635
>gi|312378128|gb|EFR24784.1| hypothetical protein AND_10400 [Anopheles darlingi]
Length = 2623
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 207/537 (38%), Positives = 299/537 (55%), Gaps = 76/537 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+ +Q++GL+WLI + +V+L DEMGLGKT+Q I FL YL SQ GPFL + PL
Sbjct: 577 KLRDYQMDGLNWLILTWCKKNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPL 636
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E A + P++ + Y+G+ + R IR+ YE ++++ L F+ +LTT
Sbjct: 637 STMPAWQREFAIWAPEMNFVTYLGDVQSREMIRQ--YEWCFDRTKK-----LKFNAILTT 689
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL I W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 690 YEILLKDKTFLGSISWASLLVDEAHRLKNDDSLLYKALKE-FDTNHRLLITGTPLQNSLK 748
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F T + F + + + +T L L ++LRR K+
Sbjct: 749 ELWALLHFIMPQRFETWDSFERNYGN-------------DKSYTELHKELEPYILRRVKK 795
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKE---LPKLLALSSRT-----------AN 319
+ + + + E+T +Q++ Y IL + L K L S+ T N
Sbjct: 796 DVEKSLPAKVEQILRVEMTSIQRQYYRWILTRNFDALRKGLKGSANTFLNIVIELKKCCN 855
Query: 320 HQSLQN------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
H L SGKLV+LD LL +L +GHRVL+F+QM + LDIL
Sbjct: 856 HAMLTRPVEFDAQVNQDDVLQQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDIL 915
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
++L+ R +SY+RLDGSI+ E R A+ HF+ + G+ F F++STRAGG+
Sbjct: 916 AEYLQKRHFSYQRLDGSIKGELRRQALDHFNAE-----------GSTDFCFLLSTRAGGL 964
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++K
Sbjct: 965 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEENIVERAKKK 1024
Query: 482 LRLSHNVV------GDDVVDREVKERTA--VETDDLRSII-FGL-HLFDPKAINNEE 528
+ L H V+ G V+D+ T+ ++L +I+ FG LF + +EE
Sbjct: 1025 MVLDHLVIQRMDTTGRTVLDKNGGSNTSNPFNKEELSAILKFGTEELFKEEEDGDEE 1081
>gi|328722605|ref|XP_001946846.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Acyrthosiphon pisum]
Length = 1670
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 208/530 (39%), Positives = 296/530 (55%), Gaps = 73/530 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ G++WLI + +V+L DEMGLGKT+Q I FL YL + GPFLV+ PLS
Sbjct: 395 LRDYQLHGVNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFHNYQMHGPFLVVVPLS 454
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E + + P + ++ Y+G+ E R IR T E E S+ L F+ +LTTY
Sbjct: 455 TMPSWQREFSLWAPDINIVTYIGDVESRNIIRET--EWCFESSKR-----LKFNAILTTY 507
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D L+ + W ++DEA RLKN S+LY L + F +RLL+TGTP+QN+L E
Sbjct: 508 EIVLKDSLLLNSLSWAVLMVDEAHRLKNDDSLLYKAL-QGFDTNQRLLITGTPLQNSLKE 566
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP F +F + +H ++A K +T L L ++LRR K+
Sbjct: 567 LWALLHFIMPGKFDNWEEF-----EHMHDNAASK------GYTKLHRQLEPYILRRVKKD 615
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSS--------------RTANH 320
+ + + + E+T +Q+K Y IL K L S + NH
Sbjct: 616 VEKSLPAKVEQILRVEMTPVQRKYYKWILTKNYNALRKGSKGSSTTFLNIMIELKKCCNH 675
Query: 321 ------QSLQNTA----------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDF 364
Q +NTA SGKL++LD LL +L +GHRVL+F+QM + LDIL ++
Sbjct: 676 ALLTKPQENENTADDNLQGLLRGSGKLMLLDKLLVRLRETGHRVLIFSQMVRMLDILAEY 735
Query: 365 LELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLN 424
L R ++RLDGSI+ + R A+ HF+ A G+ F F++STRAGG+G+N
Sbjct: 736 LSYRHLPFQRLDGSIKGDIRRQALEHFN-----------AEGSQDFCFLLSTRAGGLGIN 784
Query: 425 LVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRL 484
L ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+ +VEE I+ RA++K+ L
Sbjct: 785 LATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKGSVEEDIVERAKQKMVL 844
Query: 485 SHNVV------GDDVVDREVKERT-AVETDDLRSII-FGL-HLF--DPKA 523
H V+ G V+D++ K + D+L +I+ FG LF DP A
Sbjct: 845 DHLVIQRMDTTGRTVLDKKAKNASIPFNKDELTAILKFGAEELFKDDPGA 894
>gi|291408171|ref|XP_002720328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1-like isoform 3 [Oryctolagus
cuniculus]
Length = 1049
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 272/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 190 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 249
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 250 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 297
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 298 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 356
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 357 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHSVLKPFLLRRIK 407
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 408 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 463
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK++VLD LL KL G RVL+F+QMT+ LD
Sbjct: 464 RKCCNHPYLFDGAEPGPPYTTDEHIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLD 523
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+V ++ F+FM+STRAG
Sbjct: 524 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNS-----------SKFIFMLSTRAG 572
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 573 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 632
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 633 IKLRLDSIVI 642
>gi|395848677|ref|XP_003796975.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Otolemur garnettii]
Length = 1070
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLYNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEVKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVTNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NAPNSSKFIFMLST 574
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 635 RAEIKLRLDSIVI 647
>gi|405124217|gb|AFR98979.1| transcription activator snf2l1 [Cryptococcus neoformans var. grubii
H99]
Length = 1068
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 184/490 (37%), Positives = 275/490 (56%), Gaps = 74/490 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +QV+GL+W++ + G+N +L DEMGLGKTLQ +SF+ YLKF Q PGP L++ P
Sbjct: 208 GKMRDYQVQGLNWMVSLHHNGINGILADEMGLGKTLQTVSFIGYLKFHQGIPGPHLIIVP 267
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI--RRTMYEHVKEQSQMSNVSPLPFDVL 152
S D W E+AK+ P V+ G +E+R + RR + + FDVL
Sbjct: 268 KSTLDNWAREVAKWVPGFNVVVLQGTKEERGELISRRILTQD--------------FDVL 313
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++ L ++ L + W Y IIDEA R+KN S+L ++R F+ RLL+TGTP+QN
Sbjct: 314 ITSYEMCLREKSTLKRFSWEYIIIDEAHRIKNVDSLLSQIIRT-FVSRGRLLITGTPLQN 372
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF + F + FK A +K+ L +L F+LRR
Sbjct: 373 NLQELWALLNFILPDVFSSSEDFDAWFKT---KDEADPDAVVKQ----LHKVLRPFLLRR 425
Query: 273 TKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKELPKLLALSSR----------- 316
K + H +LP +T +Q+K Y S+L K++ + ++ +
Sbjct: 426 VK---ADVEHSLLPKKEINLYVGMTEMQRKWYKSLLEKDIDAVNGMTGKKEGKTRLLNIV 482
Query: 317 -----TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
NH L + A +GK+V+LD LLK + G RVL+F+QM++
Sbjct: 483 MQLRKCCNHPYLFDGAEPGPPFTTDQHLVDNAGKMVILDKLLKSMKAKGSRVLIFSQMSR 542
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ + R + Y R+DG E+R AAI ++ A G++ FVF+++T
Sbjct: 543 MLDILEDYCQFRGHQYCRIDGGTAHEDRIAAIDEYN-----------APGSEKFVFLLTT 591
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NLV AD V+ ++ DWNPQ D QA+ RAHRIGQ V +T+ VEE I+
Sbjct: 592 RAGGLGINLVTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITQDAVEERILE 651
Query: 477 RAERKLRLSH 486
RA +KL+L
Sbjct: 652 RATQKLKLDQ 661
>gi|291408169|ref|XP_002720327.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1-like isoform 2 [Oryctolagus
cuniculus]
Length = 1041
Score = 331 bits (848), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 272/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 182 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 241
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 242 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 289
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 290 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 348
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 349 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHSVLKPFLLRRIK 399
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 400 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 455
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK++VLD LL KL G RVL+F+QMT+ LD
Sbjct: 456 RKCCNHPYLFDGAEPGPPYTTDEHIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLD 515
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+V ++ F+FM+STRAG
Sbjct: 516 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNS-----------SKFIFMLSTRAG 564
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 565 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 624
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 625 IKLRLDSIVI 634
>gi|301607520|ref|XP_002933353.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Xenopus (Silurana) tropicalis]
Length = 1809
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 200/493 (40%), Positives = 283/493 (57%), Gaps = 67/493 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL + GPFL+
Sbjct: 482 GEGLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHLHLLYGPFLL 541
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P + V+ Y+G+ R IR YE V +QS+ + F+
Sbjct: 542 VVPLSTLTSWQREFEVWAPDINVVVYIGDLGSRNTIRE--YEWVHQQSKK-----MKFNA 594
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
LLTTY+++L D+ LS I W + +DEA RLKN S+LY L E F RLL+TGTP+Q
Sbjct: 595 LLTTYEILLKDKAVLSSINWAFLGVDEAHRLKNDDSLLYKTLIE-FKSNARLLITGTPLQ 653
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F + F+D + GK ++ + SL +L F+L
Sbjct: 654 NSLKELWSLLHFIMPEKF----ECWEDFED--------QHGKGRDNGYQSLHKVLEPFLL 701
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E+ V+QK+ Y IL + K L+ +R
Sbjct: 702 RRVKKDVEKSLPAKVEQILRVEMCVMQKQYYRWILTRNY-KALSKGTRGSTSGFLNIVME 760
Query: 317 ---TANH---------------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
NH SLQ+ +SGKLV+LD LL +L G+RVL+F+QM +
Sbjct: 761 LKKCCNHCFLIKPEETEKESRLDSLQSLIRSSGKLVLLDKLLTRLRERGNRVLIFSQMVR 820
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++ST
Sbjct: 821 MLDILAEYLAIKHYPFQRLDGSIKGELRKQALDHFN-----------AEGSEDFCFLLST 869
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT TVEE I+
Sbjct: 870 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTRGTVEEDIIE 929
Query: 477 RAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 930 RAKKKMVLDHLVI 942
>gi|395848675|ref|XP_003796974.1| PREDICTED: probable global transcription activator SNF2L1 isoform 2
[Otolemur garnettii]
Length = 1054
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLYNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEVKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVTNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NAPNSSKFIFMLST 574
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 635 RAEIKLRLDSIVI 647
>gi|134117902|ref|XP_772332.1| hypothetical protein CNBL2000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254945|gb|EAL17685.1| hypothetical protein CNBL2000 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1096
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/534 (36%), Positives = 294/534 (55%), Gaps = 81/534 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +QV+GL+W++ + G+N +L DEMGLGKTLQ ++F+ YLKF PGP L++ P
Sbjct: 211 GKMRDYQVQGLNWMVSLHHNGINGILADEMGLGKTLQTVAFIGYLKFHLGIPGPHLIIVP 270
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI--RRTMYEHVKEQSQMSNVSPLPFDVL 152
S D W E+AK+ P +V+ G +E+R + RR + + FDVL
Sbjct: 271 KSTLDNWAREVAKWVPGFDVVVLQGTKEERGELISRRILTQD--------------FDVL 316
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++ L ++ L + W Y IIDEA R+KN S+L ++R F+ RLL+TGTP+QN
Sbjct: 317 ITSYEMCLREKSTLKRFSWEYIIIDEAHRIKNVDSLLSQIIRT-FVSRGRLLITGTPLQN 375
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF + F + FK A +K+ L +L F+LRR
Sbjct: 376 NLQELWALLNFILPDVFSSSEDFDAWFK---TKDEADPDAVVKQ----LHKVLRPFLLRR 428
Query: 273 TKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKELPKLLALSSR----------- 316
K + H +LP +T +Q+K Y S+L K++ + ++ +
Sbjct: 429 VK---ADVEHSLLPKKEINLYVGMTEMQRKWYKSLLEKDIDAVNGMTGKKEGKTRLLNIV 485
Query: 317 -----TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
NH L + A +GK+V+LD LLK + G RVL+F+QM++
Sbjct: 486 MQLRKCCNHPYLFDGAEPGPPFTTDQHLVDNAGKMVILDKLLKSMKAKGSRVLIFSQMSR 545
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ + R + Y R+DGS E+R AAI ++ A ++ FVF+++T
Sbjct: 546 MLDILEDYCQFRGHQYCRIDGSTAHEDRIAAIDEYN-----------APESEKFVFLLTT 594
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NLV AD V+ ++ DWNPQ D QA+ RAHRIGQ V +T+ VEE I+
Sbjct: 595 RAGGLGINLVTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITQDAVEERILE 654
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLFDPKAINNEES 529
RA +KL+L V+ + + K A DDL +I G K INN+ES
Sbjct: 655 RATQKLKLDQLVIQEGRAQQTAK--VAQNKDDLLDMIQHGAE----KIINNKES 702
>gi|58270438|ref|XP_572375.1| transcription activator snf2l1 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228633|gb|AAW45068.1| transcription activator snf2l1, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 1096
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/534 (36%), Positives = 294/534 (55%), Gaps = 81/534 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +QV+GL+W++ + G+N +L DEMGLGKTLQ ++F+ YLKF PGP L++ P
Sbjct: 211 GKMRDYQVQGLNWMVSLHHNGINGILADEMGLGKTLQTVAFIGYLKFHLGIPGPHLIIVP 270
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI--RRTMYEHVKEQSQMSNVSPLPFDVL 152
S D W E+AK+ P +V+ G +E+R + RR + + FDVL
Sbjct: 271 KSTLDNWAREVAKWVPGFDVVVLQGTKEERGELISRRILTQD--------------FDVL 316
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++ L ++ L + W Y IIDEA R+KN S+L ++R F+ RLL+TGTP+QN
Sbjct: 317 ITSYEMCLREKSTLKRFSWEYIIIDEAHRIKNVDSLLSQIIRT-FVSRGRLLITGTPLQN 375
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF + F + FK A +K+ L +L F+LRR
Sbjct: 376 NLQELWALLNFILPDVFSSSEDFDAWFK---TKDEADPDAVVKQ----LHKVLRPFLLRR 428
Query: 273 TKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKELPKLLALSSR----------- 316
K + H +LP +T +Q+K Y S+L K++ + ++ +
Sbjct: 429 VK---ADVEHSLLPKKEINLYVGMTEMQRKWYKSLLEKDIDAVNGMTGKKEGKTRLLNIV 485
Query: 317 -----TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
NH L + A +GK+V+LD LLK + G RVL+F+QM++
Sbjct: 486 MQLRKCCNHPYLFDGAEPGPPFTTDQHLVDNAGKMVILDKLLKSMKAKGSRVLIFSQMSR 545
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ + R + Y R+DGS E+R AAI ++ A ++ FVF+++T
Sbjct: 546 MLDILEDYCQFRGHQYCRIDGSTAHEDRIAAIDEYN-----------APESEKFVFLLTT 594
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NLV AD V+ ++ DWNPQ D QA+ RAHRIGQ V +T+ VEE I+
Sbjct: 595 RAGGLGINLVTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITQDAVEERILE 654
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLFDPKAINNEES 529
RA +KL+L V+ + + K A DDL +I G K INN+ES
Sbjct: 655 RATQKLKLDQLVIQEGRAQQTAK--VAQNKDDLLDMIQHGAE----KIINNKES 702
>gi|393244885|gb|EJD52396.1| transcription regulator [Auricularia delicata TFB-10046 SS5]
Length = 1435
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 207/519 (39%), Positives = 280/519 (53%), Gaps = 74/519 (14%)
Query: 14 IHDNDERD--GQTPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTL 70
I++ D R Q P D VT +LK Q+ GL+WL + G N +L DEMGLGKT+
Sbjct: 343 IYNRDRRPQFTQIPSDPDFVVVTGNQLKDFQLTGLNWLAYLWHNGENGILADEMGLGKTV 402
Query: 71 QAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRT 130
Q++ +LSYL GPFLV+ PLS W S + P L+V+ Y G R IR
Sbjct: 403 QSVVYLSYLFHRMRQLGPFLVIVPLSTIPAWQSTFQNWAPDLDVITYQGNSRARSIIRHY 462
Query: 131 MYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLY 190
+ Q+ L F+VLLTTY++VL D LS I W +DEA RLKN S LY
Sbjct: 463 EFG----QTGGHKKPQLKFNVLLTTYELVLKDASELSGIKWLALAVDEAHRLKNHESQLY 518
Query: 191 NVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPK 250
LR F +LL+TGTP+QNN+ EL ALMHF MP F N F DA H S
Sbjct: 519 EALRA-FSASSKLLITGTPLQNNVKELLALMHFLMPERFPLTNDF--DLNDADHES---- 571
Query: 251 RGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILR 304
KIKE + L+G+ MLRR K+ +++ LP E++ LQ Y +IL
Sbjct: 572 --KIKELHSQLEGL----MLRRLKRDVIKS----LPTKKEQILRVEMSTLQTHYYKNILT 621
Query: 305 KELPKLLALSSRTANHQSLQNTA---------------------------------SGKL 331
K L ++ H SL N A SGKL
Sbjct: 622 KNFTALSKGAAGGGGHISLLNIAMELKKAANHPYLFDGAEAPAASPEETLKALVMSSGKL 681
Query: 332 VVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHF 391
V+LD LL +L GHRVL+F+QM + LDIL D++ LR Y ++RLDG++ ++ER AI HF
Sbjct: 682 VLLDKLLARLRADGHRVLIFSQMVRMLDILTDYMHLRGYPHQRLDGTVSSDERKKAIAHF 741
Query: 392 SVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAH 451
+ +++ FVF++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAH
Sbjct: 742 NAPGSLD-----------FVFLLSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAH 790
Query: 452 RIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG 490
RIGQ +HV V++ T+EE ++ RA++K+ L + ++
Sbjct: 791 RIGQKSHVNVYRFVSKDTMEEDVLERAKKKMVLEYAIIN 829
>gi|311276917|ref|XP_003135410.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Sus scrofa]
Length = 1073
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 272/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 186 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 245
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 246 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 293
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 294 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 352
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 353 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 403
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 404 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 459
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 460 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NVPNSSRFIFMLST 577
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 578 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 637
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 638 RAEIKLRLDSIVI 650
>gi|384250118|gb|EIE23598.1| hypothetical protein COCSUDRAFT_47361 [Coccomyxa subellipsoidea
C-169]
Length = 1246
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 195/501 (38%), Positives = 276/501 (55%), Gaps = 73/501 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F +L+ +Q+EGL+WLI ++ N +L DEMGLGKT+Q +SF+ YL Q GP+
Sbjct: 119 DFLRAGQLRDYQLEGLNWLIYSWMQNNNCILADEMGLGKTIQCVSFIGYLSLWQQIAGPY 178
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
LV+ PLS W+ E K+ P+ L YVG+ + R IR + K +M F
Sbjct: 179 LVVVPLSTVPNWIREFRKWLPQCNALVYVGDSKSREVIRAFEFYTGKRSGRMYK-----F 233
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
DVL+TT+++VL D LS+I W Y ++DEA RLKN S LY L + +LL+TGTP
Sbjct: 234 DVLITTFELVLKDAAVLSEIKWSYLVVDEAHRLKNNESALYREL-ATWQFKNKLLVTGTP 292
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QN++ ELWAL+HF PS F F DA HS K E+ T L L +
Sbjct: 293 LQNSMKELWALLHFLEPSKFPNAEDF-----DARHSL------KKAEELTQLHTELRPHL 341
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR---KELPK----------- 309
LRR + + + LPP E ++ LQK+ Y IL KEL K
Sbjct: 342 LRRVIKDVEKS----LPPKNERILRVAMSPLQKQYYKWILTRNFKELNKGTKGGGQISLL 397
Query: 310 -LLALSSRTANHQSLQNTA--------------------SGKLVVLDLLLKKLYNSGHRV 348
++ + NH L +A +GK+V+LD L+++L +GHRV
Sbjct: 398 NIITELKKCCNHPFLFESAESDFRGSNDDSKAVDRLTVSAGKMVLLDKLMRRLKETGHRV 457
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDI+ D++ LR + ++RLDGS A +R A+ HF+ A G+
Sbjct: 458 LIFSQMVRMLDIISDYMRLRGFQHQRLDGSTPAAQRHQAMEHFN-----------APGST 506
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V +T
Sbjct: 507 DFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTETVNIYRFLTSG 566
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
+VEE I+ RA++K+ L H V+
Sbjct: 567 SVEEDILERAKQKMVLDHLVI 587
>gi|395502487|ref|XP_003755611.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Sarcophilus
harrisii]
Length = 1823
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 198/494 (40%), Positives = 282/494 (57%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFLV
Sbjct: 473 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLV 532
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 533 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 585
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 586 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 644
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F+D GK +E + SL +L F+L
Sbjct: 645 NSLKELWSLLHFIMPEKF----EFWEDFED--------DHGKGRENGYQSLHKVLEPFLL 692
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++VLQK+ Y IL + K L+ +R
Sbjct: 693 RRVKKDVEKSLPAKVEQILRVEMSVLQKQYYKWILTRNY-KALSKGTRGSTSGFLNIVME 751
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 752 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 811
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 812 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 860
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 861 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 920
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 921 ERAKKKMVLDHLVI 934
>gi|118344288|ref|NP_001071967.1| SWI/SNF protein [Ciona intestinalis]
gi|70571306|dbj|BAE06719.1| Ci-SWI/SNF [Ciona intestinalis]
Length = 1003
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 190/490 (38%), Positives = 272/490 (55%), Gaps = 68/490 (13%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
E++ +Q+ GL+W+I Y G++ +L DEMGLGKTLQ IS L YLK + PGP +V+
Sbjct: 129 NGEMRDYQIRGLNWMISLYENGISGILADEMGLGKTLQTISLLGYLKHYRSIPGPHMVIV 188
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E ++ P + + +G ++QR I R + + P +DV +
Sbjct: 189 PKSTISNWVNEFERWCPSIRTVCLIGSKDQRATIIRDV------------MMPGEWDVCI 236
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y+V+++++ + W Y +IDEA R+KN S L ++R+ F RLL+TGTP+QNN
Sbjct: 237 TSYEVIIIEKACFKKFNWRYVVIDEAHRIKNEKSKLSTIVRQ-FRSTNRLLLTGTPLQNN 295
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F S F +A K T L G+L F+LRR
Sbjct: 296 LHELWALLNFLLPDVFNSSEDFDSWF-------NANNLEDDKGLVTRLHGVLRPFLLRRL 348
Query: 274 KQKLVECGHLMLPP-----LTEITVLQKKVYASILRKE--------------LPKLLALS 314
K + H +LP T ++ +Q++ Y IL K+ L +L
Sbjct: 349 KS---DVEHSLLPKKETKIYTGLSKMQREWYTKILVKDIDIINAAGRTDRVRLLNILMQL 405
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGKL VLD LL K G RVL+F+QMT+ LD
Sbjct: 406 RKCCNHPYLFDGAEPGPPYTTSEHLVVNSGKLSVLDKLLPKFQEQGDRVLIFSQMTRILD 465
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y+Y RLDG E+R I F+ G++ F+FM+STRAG
Sbjct: 466 ILEDYCMWRGYNYCRLDGQTPHEDRQRQINEFN-----------RPGSEKFIFMLSTRAG 514
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL+ A+ VI ++ DWNPQVD QA+ RAHRIGQ V+ L+TE+TVEE I+ RAE
Sbjct: 515 GLGINLMTANIVILFDSDWNPQVDMQAMDRAHRIGQKKQVMVFRLITENTVEERIIERAE 574
Query: 480 RKLRLSHNVV 489
KL L + V+
Sbjct: 575 MKLHLDNIVI 584
>gi|343429407|emb|CBQ72980.1| probable ISW2-ATPase component of a two subunit chromatin
remodeling complex [Sporisorium reilianum SRZ2]
Length = 1110
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 192/511 (37%), Positives = 283/511 (55%), Gaps = 72/511 (14%)
Query: 16 DNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISF 75
D++E D ++ + +++ +QV+GL+W+I Y G+N +L DEMGLGKTLQ ISF
Sbjct: 208 DDEEEDAFVFNESPAYVKGGKMRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQTISF 267
Query: 76 LSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV 135
L YL+ + +PG LV+ P S D W E ++ P V+ G +E+R + + +H+
Sbjct: 268 LGYLRDFRDTPGFHLVVVPKSTLDNWYREFHRWVPGFNVVTLKGSKEEREKV---IQDHL 324
Query: 136 KEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE 195
P FDVL+TTY++ L ++ L ++ W Y +IDEA R+KN S+L ++R
Sbjct: 325 ---------LPQDFDVLITTYEMCLREKSALKKLSWEYIVIDEAHRIKNVDSMLSQIVRA 375
Query: 196 HFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIK 255
F RLL+TGTP+QNNL ELW+L++F +P VF F S FK + ++
Sbjct: 376 -FNSRSRLLITGTPLQNNLMELWSLLNFLLPDVFSNSEDFESWFK----GKGDENQDQVV 430
Query: 256 EQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-- 307
+Q L +L F+LRR K + + L P EI + +Q+K Y SIL K++
Sbjct: 431 QQ---LHKVLRPFLLRRVKADVEKS----LLPKKEINIFVGLTEMQRKWYKSILEKDIDA 483
Query: 308 -----------PKLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLL 338
+LL + + NH L + A SGK+V+LD LL
Sbjct: 484 VNGGVGKKEGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPFTTDEHLVDNSGKMVILDRLL 543
Query: 339 KKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIE 398
K+ G RVL+F+QM++ LDIL+D+ R+Y Y R+DG ++R AAI ++
Sbjct: 544 HKMKQKGSRVLIFSQMSRMLDILEDYCLFREYQYCRIDGGTAHDDRIAAIDEYN------ 597
Query: 399 RLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
G+D FVF+++TRAGG+G+NL AD V+ ++ DWNPQ D QA+ RAHRIGQ
Sbjct: 598 -----KPGSDKFVFLLTTRAGGLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQ 652
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
V VTEH +EE I+ RA +KLRL V+
Sbjct: 653 VYVFRFVTEHAIEERILDRAAQKLRLDQLVI 683
>gi|332226354|ref|XP_003262354.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription
activator SNF2L1 [Nomascus leucogenys]
Length = 1059
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 271/490 (55%), Gaps = 73/490 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F F K+ + +R + K +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDFWFDTKNCLGDQKLVERPQ--------KXVLKPFLLRRIK 401
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 402 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 457
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 458 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 517
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 518 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN-----------APNSSKFIFMLSTRAG 566
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 567 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 626
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 627 IKLRLDSIVI 636
>gi|410081892|ref|XP_003958525.1| hypothetical protein KAFR_0G03580 [Kazachstania africana CBS 2517]
gi|372465113|emb|CCF59390.1| hypothetical protein KAFR_0G03580 [Kazachstania africana CBS 2517]
Length = 1055
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 280/494 (56%), Gaps = 71/494 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+ +QV+GL+WLI + G+ +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 139 INGQLRHYQVQGLNWLISLHRSGLAGILADEMGLGKTLQTISFLGYLRYIEKVPGPFLVI 198
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W E+ ++TP++ G++++R E +KE N+ FDV+
Sbjct: 199 APKSTLNNWKREVNRWTPEINAFILQGDKDERS-------ELIKE-----NLLSCNFDVV 246
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++V+ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 247 IASYEIVIREKASLRKIDWEYIIIDEAHRIKNEESLLSQVLRE-FTSRNRLLITGTPLQN 305
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ +G I +Q L +L F+LRR
Sbjct: 306 NLHELWALLNFLLPDIFSDSQDFDDWFS---SESTEKDQGSIVKQ---LHTVLQPFLLRR 359
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K VE L P E+ + +QKK Y IL K+L +LL +
Sbjct: 360 IKND-VETSLL---PKQELNLYVGMSSMQKKWYRKILEKDLDAVNGSNGTKESKTRLLNI 415
Query: 314 S---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NH L + A S KL VLD LL K+ G RVL+F+QM+
Sbjct: 416 VMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSAKLKVLDKLLTKMKMEGSRVLIFSQMS 475
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ R Y Y R+DGS E+R A+ ++ A G+ F+F+++
Sbjct: 476 RVLDILEDYCYFRGYEYCRIDGSTAHEDRIEAMDEYN-----------APGSSKFIFLLT 524
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+
Sbjct: 525 TRAGGLGINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKIL 584
Query: 476 RRAERKLRLSHNVV 489
RA +KLRL V+
Sbjct: 585 ERATQKLRLDQLVI 598
>gi|351703199|gb|EHB06118.1| Chromodomain-helicase-DNA-binding protein 1-like protein
[Heterocephalus glaber]
Length = 862
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 202/492 (41%), Positives = 270/492 (54%), Gaps = 87/492 (17%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+P+Q+EG++WL+ + +LGDEMGLGKT Q I+ YL+ GPFL+LCPLS
Sbjct: 17 LRPYQLEGVNWLVECFHCRNGCILGDEMGLGKTCQTIALFIYLEGRLNDEGPFLILCPLS 76
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V W EM + P L + Y G++E+R ++++ + +Q S+ F VLLTTY
Sbjct: 77 VLSNWKEEMERCAPGLSCVTYAGDKEERVHLQQVL-------TQDSH-----FHVLLTTY 124
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L D FL W ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L E
Sbjct: 125 EICLRDASFLKSFSWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQE 183
Query: 217 LWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
L++L+ F P +F + F+ ++D S + L +L F+LRR K
Sbjct: 184 LYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESKSG---------NELHRLLQPFLLRRVK 234
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT-- 326
++ LP TE+ + LQKK Y +IL K+L A + A LQN
Sbjct: 235 AEVAT----ELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENEMAKKVKLQNILS 287
Query: 327 ----------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
ASGKL +LD L GHRVLLF+QMTQ L
Sbjct: 288 QLRKCVDHPYLFDGVEPEPFEVGDHLIEASGKLHLLDKL-------GHRVLLFSQMTQML 340
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DILQD+++ R YSYER+DGS+R EER AI++F G FVF++STRA
Sbjct: 341 DILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQPIFVFLLSTRA 387
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE + RRA
Sbjct: 388 GGVGMNLTAADTVIFIDSDFNPQNDLQAAARAHRIGQNKPVRVIRLIGRDTVEETVCRRA 447
Query: 479 ERKLRLSHNVVG 490
KL+L+ VG
Sbjct: 448 ASKLQLASVAVG 459
>gi|301766462|ref|XP_002918636.1| PREDICTED: probable global transcription activator SNF2L1-like
isoform 1 [Ailuropoda melanoleuca]
Length = 1054
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLYNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE ++ F+FM+ST
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NVPNSNKFIFMLST 574
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 635 RAEIKLRLDSIVI 647
>gi|194271429|gb|ACF37172.1| SNF2LT [Homo sapiens]
Length = 776
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 197/490 (40%), Positives = 271/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMVPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN-----------APNSSKFIFMLSTRAG 565
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DW+PQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 566 GLGINLASADVVILYDSDWSPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 625
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 626 IKLRLDSIVI 635
>gi|335306517|ref|XP_003360491.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Sus scrofa]
Length = 1057
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 272/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 186 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 245
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 246 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 293
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 294 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 352
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 353 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 403
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 404 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 459
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 460 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NVPNSSRFIFMLST 577
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 578 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 637
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 638 RAEIKLRLDSIVI 650
>gi|326926799|ref|XP_003209584.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Meleagris gallopavo]
Length = 1837
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/490 (40%), Positives = 283/490 (57%), Gaps = 68/490 (13%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFLV+ PL
Sbjct: 486 ELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPL 545
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P++ V+ Y+G+ R IR YE + QS+ L F+ L+TT
Sbjct: 546 STLTSWQREFEVWAPEINVVVYIGDLMSRNMIRE--YEWIHSQSKR-----LKFNALITT 598
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+QN+L
Sbjct: 599 YEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQNSLK 657
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFMLRRTK 274
ELW+L+HF MP F +F F++ GK +E + SL +L F+LRR K
Sbjct: 658 ELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLLRRVK 705
Query: 275 QKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR---------------T 317
+ + + + + E++ LQK+ Y IL + K L+ +R
Sbjct: 706 KDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALSKGTRGSTSGFLNIVMELKKC 764
Query: 318 ANH----------------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH ++LQ+ +SGKL++LD LL +L + G+RVL+F+QM + LD
Sbjct: 765 CNHCYLIKPPEENERENGIETLQSLIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLD 824
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++STRAG
Sbjct: 825 ILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLSTRAG 873
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+ RA+
Sbjct: 874 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAK 933
Query: 480 RKLRLSHNVV 489
+K+ L H V+
Sbjct: 934 KKMVLDHLVI 943
>gi|157107192|ref|XP_001649666.1| chromodomain helicase DNA binding protein [Aedes aegypti]
gi|108879647|gb|EAT43872.1| AAEL004716-PB [Aedes aegypti]
Length = 2001
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 204/553 (36%), Positives = 303/553 (54%), Gaps = 78/553 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL YL +Q GPFL + PL
Sbjct: 576 KLRDYQMDGLNWLVLTWCKENSVILADEMGLGKTIQTICFLYYLFKAQQLYGPFLCVVPL 635
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E A + P++ V+ Y+G+ R IR+ + ++ L F+ +LTT
Sbjct: 636 STMTAWQREFAIWAPEMNVVTYLGDVASREIIRQYEWCFPNQK--------LKFNAILTT 687
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL + W ++DEA RLKN S+LY L E F RLL+TGTP+QN+L
Sbjct: 688 YEILLKDKTFLGSVSWAVLLVDEAHRLKNDDSLLYKAL-EEFDTNYRLLITGTPLQNSLK 746
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP+ F T F + + + S +T L L ++LRR K+
Sbjct: 747 ELWALLHFIMPNRFDTWESFERLYGNTSNDKS----------YTKLHKELEPYILRRVKK 796
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQ++ Y IL K L + + N
Sbjct: 797 DVEKSLPAKVEQILRVEMTSLQRQYYRWILTKNFDALRKGTKGSINTFLNIMIELKKCCN 856
Query: 320 H-----------QSLQN-------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
H Q+ Q+ SGKLV+LD LL +L +GHRVL+F+QM + LDIL
Sbjct: 857 HALLTKPEEFENQTNQDEVVVQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDIL 916
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
++L+ R +S++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG+
Sbjct: 917 AEYLQKRHFSFQRLDGSIKGELRKQALDHFNAE-----------GSTDFCFLLSTRAGGL 965
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++K
Sbjct: 966 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKKK 1025
Query: 482 LRLSHNVV------GDDVVDREVKERTA--VETDDLRSII-FGL-HLFDPKAINNEESDD 531
+ L H V+ G V+D+ + D+L +I+ FG LF +EE DD
Sbjct: 1026 MVLDHLVIQRMDTTGRTVLDKNGGSNSTNPFNKDELSAILKFGAEELFK----EDEEGDD 1081
Query: 532 LRLSGLNSMVEKV 544
+ ++ ++++
Sbjct: 1082 ELVCDIDEILKRA 1094
>gi|157107190|ref|XP_001649665.1| chromodomain helicase DNA binding protein [Aedes aegypti]
gi|108879646|gb|EAT43871.1| AAEL004716-PA [Aedes aegypti]
Length = 2002
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 204/553 (36%), Positives = 303/553 (54%), Gaps = 78/553 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL YL +Q GPFL + PL
Sbjct: 576 KLRDYQMDGLNWLVLTWCKENSVILADEMGLGKTIQTICFLYYLFKAQQLYGPFLCVVPL 635
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E A + P++ V+ Y+G+ R IR+ + ++ L F+ +LTT
Sbjct: 636 STMTAWQREFAIWAPEMNVVTYLGDVASREIIRQYEWCFPNQK--------LKFNAILTT 687
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL + W ++DEA RLKN S+LY L E F RLL+TGTP+QN+L
Sbjct: 688 YEILLKDKTFLGSVSWAVLLVDEAHRLKNDDSLLYKAL-EEFDTNYRLLITGTPLQNSLK 746
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP+ F T F + + + S +T L L ++LRR K+
Sbjct: 747 ELWALLHFIMPNRFDTWESFERLYGNTSNDKS----------YTKLHKELEPYILRRVKK 796
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQ++ Y IL K L + + N
Sbjct: 797 DVEKSLPAKVEQILRVEMTSLQRQYYRWILTKNFDALRKGTKGSINTFLNIMIELKKCCN 856
Query: 320 H-----------QSLQN-------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
H Q+ Q+ SGKLV+LD LL +L +GHRVL+F+QM + LDIL
Sbjct: 857 HALLTKPEEFENQTNQDEVVVQLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDIL 916
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
++L+ R +S++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG+
Sbjct: 917 AEYLQKRHFSFQRLDGSIKGELRKQALDHFNAE-----------GSTDFCFLLSTRAGGL 965
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++K
Sbjct: 966 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKKK 1025
Query: 482 LRLSHNVV------GDDVVDREVKERTA--VETDDLRSII-FGL-HLFDPKAINNEESDD 531
+ L H V+ G V+D+ + D+L +I+ FG LF +EE DD
Sbjct: 1026 MVLDHLVIQRMDTTGRTVLDKNGGSNSTNPFNKDELSAILKFGAEELFK----EDEEGDD 1081
Query: 532 LRLSGLNSMVEKV 544
+ ++ ++++
Sbjct: 1082 ELVCDIDEILKRA 1094
>gi|363737795|ref|XP_413879.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2 [Gallus gallus]
Length = 1837
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/490 (40%), Positives = 283/490 (57%), Gaps = 68/490 (13%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFLV+ PL
Sbjct: 486 ELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPL 545
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P++ V+ Y+G+ R IR YE + QS+ L F+ L+TT
Sbjct: 546 STLTSWQREFEVWAPEINVVVYIGDLMSRNMIRE--YEWIHSQSKR-----LKFNALITT 598
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+QN+L
Sbjct: 599 YEILLKDKAVLGSISWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQNSLK 657
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFMLRRTK 274
ELW+L+HF MP F +F F++ GK +E + SL +L F+LRR K
Sbjct: 658 ELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLLRRVK 705
Query: 275 QKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR---------------T 317
+ + + + + E++ LQK+ Y IL + K L+ +R
Sbjct: 706 KDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALSKGTRGSTSGFLNIVMELKKC 764
Query: 318 ANH----------------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH ++LQ+ +SGKL++LD LL +L + G+RVL+F+QM + LD
Sbjct: 765 CNHCYLIKPPEENERENGIETLQSLIRSSGKLILLDKLLTRLRDRGNRVLIFSQMVRMLD 824
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++STRAG
Sbjct: 825 ILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLSTRAG 873
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+ RA+
Sbjct: 874 GLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAK 933
Query: 480 RKLRLSHNVV 489
+K+ L H V+
Sbjct: 934 KKMVLDHLVI 943
>gi|148675185|gb|EDL07132.1| mCG19747 [Mus musculus]
Length = 1723
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 304/544 (55%), Gaps = 78/544 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G + EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 486 GESLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 545
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 546 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 598
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 599 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 657
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 658 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 705
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRK---------------------EL 307
RR K+ + + + + E++ LQK+ Y IL + EL
Sbjct: 706 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMEL 765
Query: 308 PKLLAL---------SSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
K S R + + LQ+ +SGKL++LD LL +L G+RVL+F+QM +
Sbjct: 766 KKCCNHCYLIKAPEDSERESGQEVLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVR 825
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++ST
Sbjct: 826 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLST 874
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 875 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIE 934
Query: 477 RAERKLRLSHNVVGD-DVVDREVKERTAVETD-------DLRSII-FGLH-LFDPKAINN 526
RA++K+ L H V+ D R V E + ++ +L +I+ FG LF K I
Sbjct: 935 RAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLF--KEIEG 992
Query: 527 EESD 530
EES+
Sbjct: 993 EESE 996
>gi|14028667|gb|AAK52453.1|AF325920_1 DNA-dependent ATPase SNF2L [Mus musculus]
Length = 1064
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 188 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 247
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 248 TLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIR------------DEMMPGEWDVCVTSY 295
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 296 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 354
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 355 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 405
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 406 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 461
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL ++ G RVL+F+QMT+ LD
Sbjct: 462 RKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLD 521
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 522 ILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN-----------APNSSKFIFMLSTRAG 570
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 571 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 630
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 631 IKLRLDSIVI 640
>gi|149745541|ref|XP_001500568.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Equus caballus]
Length = 1057
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 272/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 186 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 245
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 246 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 293
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 294 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 352
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 353 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHTVLKPFLLRRIK 403
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 404 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 459
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 460 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NVPNSSKFIFMLST 577
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 578 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 637
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 638 RAEIKLRLDSIVI 650
>gi|281351280|gb|EFB26864.1| hypothetical protein PANDA_007143 [Ailuropoda melanoleuca]
Length = 967
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 96 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 155
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 156 TLYNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 203
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 204 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 262
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 263 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 313
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 314 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 369
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 370 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 429
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE ++ F+FM+ST
Sbjct: 430 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NVPNSNKFIFMLST 487
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 488 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 547
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 548 RAEIKLRLDSIVI 560
>gi|148697108|gb|EDL29055.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_a [Mus
musculus]
Length = 1103
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 228 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 287
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 288 TLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIR------------DEMMPGEWDVCVTSY 335
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 336 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 394
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 395 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 445
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 446 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 501
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL ++ G RVL+F+QMT+ LD
Sbjct: 502 RKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLD 561
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 562 ILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN-----------APNSSKFIFMLSTRAG 610
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 611 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 670
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 671 IKLRLDSIVI 680
>gi|170050421|ref|XP_001861304.1| helicase [Culex quinquefasciatus]
gi|167872038|gb|EDS35421.1| helicase [Culex quinquefasciatus]
Length = 1024
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 200/544 (36%), Positives = 297/544 (54%), Gaps = 82/544 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + +PGP +V+ P
Sbjct: 130 GEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKNFRNNPGPHIVIVP 189
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S WV+E ++ P L + +G++E R R + + P +DV +T
Sbjct: 190 KSTLQNWVNEFGRWCPSLRAVCLIGDQETRNAFIRDV------------LMPGEWDVCIT 237
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNNL
Sbjct: 238 SYEMCIREKAVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLLTGTPLQNNL 296
Query: 215 SELWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
ELWAL++F +P +F + F S F + + ++ +R L +L F+LRR
Sbjct: 297 HELWALLNFLLPDIFNSAEDFDSWFDANECIGDNTLIQR---------LHEVLKPFLLRR 347
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLA 312
K ++ + L P E+ + +Q++ Y IL K+ L +L
Sbjct: 348 LKSEVEK----RLLPKKEVKIFVGLSKMQREWYTKILMKDIDIVNGAGKMEKMRLQNILM 403
Query: 313 LSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A SGK+++L+ LL KL G RVL+F+QMT+
Sbjct: 404 QLRKCTNHPYLFDGAEPGPPYTTDWHLVENSGKMIILEKLLNKLQEQGSRVLIFSQMTRM 463
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D+ R Y+Y RLDG E+R I ++ A G+ F+FM+STR
Sbjct: 464 LDILEDYCHWRGYNYCRLDGQTPHEDRTKMIDEYN-----------AEGSQKFIFMLSTR 512
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE+T+EE I+ R
Sbjct: 513 AGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTIEEKIVER 572
Query: 478 AERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII-FGL-HLFDPK--AINNEESDDL 532
AE KL+L V+ +VD +V + + D++ +II FG H+F K I +E+ D +
Sbjct: 573 AEIKLKLDKLVIQQGRLVDNKVNQ---LNKDEMLNIIRFGANHVFQSKDSEITDEDIDHI 629
Query: 533 RLSG 536
G
Sbjct: 630 LQKG 633
>gi|403216395|emb|CCK70892.1| hypothetical protein KNAG_0F02250 [Kazachstania naganishii CBS
8797]
Length = 1150
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 199/519 (38%), Positives = 291/519 (56%), Gaps = 72/519 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V EL+P+Q++GL+WLI + G++ +L DEMGLGKTLQ ISFL YL++ + GPFLV+
Sbjct: 137 VNGELRPYQIQGLNWLISLHKTGLSGILADEMGLGKTLQTISFLGYLRYVEKICGPFLVI 196
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP++ L G++E+R + R + FDV+
Sbjct: 197 APKSTLNNWLREINRWTPEVNALVLQGDKEERAALLR------------DRILACDFDVV 244
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++++ ++ ++ +I W Y IIDEA R+KN S+L V+RE F RLL+TGTP+QN
Sbjct: 245 VTSYELIIKEKSYMKKIDWEYIIIDEAHRIKNEESMLSQVIRE-FTSRNRLLITGTPLQN 303
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F DA SS A + K K L +L F+LRR
Sbjct: 304 NLHELWALLNFLLPDIFSNSQDF-----DAWFSSEASEENKEK-IVKQLHTVLQPFLLRR 357
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K + VE L P E+ + +Q+K Y IL K++ +LL +
Sbjct: 358 IKSE-VETSLL---PKQEMNLYVGMSSMQRKWYKQILEKDIDAVNGSNGNKESKTRLLNI 413
Query: 314 S---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NH L + A S KL VLD LL K G RVL+F+QM+
Sbjct: 414 VMQLRKCCNHPYLFDGAEPGPPYTTDEHLVFNSAKLKVLDRLLAKWKAEGSRVLIFSQMS 473
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ LR YSY R+DGS E+R +I ++ A ++ F+F+++
Sbjct: 474 RLLDILEDYCFLRSYSYCRIDGSTDHEDRIRSIDEYN-----------APDSEKFIFLLT 522
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +AD V+ ++ DWNPQ D QA+ RAHRIGQ V VT+ +VE+ I+
Sbjct: 523 TRAGGLGINLTSADIVVLFDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDVSVEDKIL 582
Query: 476 RRAERKLRL-SHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KL S D + +E KE A D L S+I
Sbjct: 583 ERATQKLETGSIGHTADRGLKQEQKESKAESKDSLLSMI 621
>gi|116283949|gb|AAH16071.1| Smarca1 protein [Mus musculus]
Length = 1032
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 187 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 246
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 247 TLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIR------------DEMMPGEWDVCVTSY 294
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 295 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 353
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 354 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 404
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 405 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 460
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL ++ G RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 521 ILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN-----------APNSSKFIFMLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 570 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 629
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 630 IKLRLDSIVI 639
>gi|426248049|ref|XP_004017778.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Ovis aries]
Length = 1827
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 222/613 (36%), Positives = 328/613 (53%), Gaps = 92/613 (15%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 478 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 537
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 538 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 590
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 591 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 649
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 650 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 697
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 698 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 756
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 757 LKKCCNHCHLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 816
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 817 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 865
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 866 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 925
Query: 476 RRAERKLRLSHNVVGD-DVVDREVKERTA-------VETDDLRSII-FGLH-LFDPKAIN 525
RA++K+ L H V+ D R V E + ++L +I+ FG LF K +
Sbjct: 926 ERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLF--KELE 983
Query: 526 NEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
EES+ + +++++ + R+ EV+ A E +FA+
Sbjct: 984 GEESEPQEMD-----IDEILRL-------AETRENEVSTSATDELLSQFKVANFATMEDE 1031
Query: 586 PDLDEASYRSWVE 598
+LDE ++ W E
Sbjct: 1032 EELDERPHKDWDE 1044
>gi|297297256|ref|XP_002808499.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2-like [Macaca mulatta]
Length = 1806
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 191/471 (40%), Positives = 277/471 (58%), Gaps = 44/471 (9%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEED--------HGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASIL--------RKELPKLLALSSRTANH 320
RR K+ + + + + E++ LQK+ Y +L L K + R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKXVLVWXXXXXXXXYLIKPPEENERENGQ 758
Query: 321 QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGS 378
+ L + +SGKL++LD LL +L G+RVL+F+QM + LDIL ++L ++ Y ++RLDGS
Sbjct: 759 EILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGS 818
Query: 379 IRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDW 438
I+ E R A+ HF+ A G++ F F++STRAGG+G+NL +ADTV+ ++ DW
Sbjct: 819 IKGEIRKQALDHFN-----------ADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDW 867
Query: 439 NPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
NPQ D QA RAHRIGQ V LVT+ TVEE I+ RA++K+ L H V+
Sbjct: 868 NPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVI 918
>gi|410989353|ref|XP_004000926.1| PREDICTED: probable global transcription activator SNF2L1 isoform 3
[Felis catus]
Length = 1069
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 272/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 182 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 241
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P + V+ +VG+++ R R + P +DV +T+Y
Sbjct: 242 TLYNWMNEFKRWVPSVRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 289
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 290 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 348
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 349 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 399
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 400 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 455
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 456 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 515
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 516 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NVPNSSKFIFMLST 573
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 574 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 633
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 634 RAEIKLRLDSIVI 646
>gi|148697109|gb|EDL29056.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_b [Mus
musculus]
Length = 1110
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 235 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 294
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 295 TLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIR------------DEMMPGEWDVCVTSY 342
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 343 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 401
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 402 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 452
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 453 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 508
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL ++ G RVL+F+QMT+ LD
Sbjct: 509 RKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLD 568
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 569 ILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN-----------APNSSKFIFMLSTRAG 617
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 618 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 677
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 678 IKLRLDSIVI 687
>gi|262050608|ref|NP_444353.3| probable global transcription activator SNF2L1 [Mus musculus]
gi|81911462|sp|Q6PGB8.1|SMCA1_MOUSE RecName: Full=Probable global transcription activator SNF2L1;
AltName: Full=ATP-dependent helicase SMARCA1; AltName:
Full=DNA-dependent ATPase SNF2L; AltName:
Full=Nucleosome-remodeling factor subunit SNF2L;
AltName: Full=SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A
member 1
gi|34783716|gb|AAH57115.1| Smarca1 protein [Mus musculus]
Length = 1046
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 187 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 246
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 247 TLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIR------------DEMMPGEWDVCVTSY 294
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 295 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 353
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 354 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 404
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 405 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 460
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL ++ G RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 521 ILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN-----------APNSSKFIFMLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 570 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 629
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 630 IKLRLDSIVI 639
>gi|355720681|gb|AES07011.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 [Mustela putorius furo]
Length = 1032
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 198/493 (40%), Positives = 272/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 169 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 228
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 229 TLYNWMNEFKRWVPSLRVICFVGDKDVRAAFIR------------DEMMPGEWDVCVTSY 276
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 277 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 335
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 336 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 386
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 387 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 442
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 443 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 502
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 503 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NVPNSSKFIFMLST 560
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 561 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 620
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 621 RAEIKLRLDSIVI 633
>gi|148697110|gb|EDL29057.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1, isoform CRA_c [Mus
musculus]
Length = 1087
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 228 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 287
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 288 TLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIR------------DEMMPGEWDVCVTSY 335
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 336 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 394
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 395 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 445
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 446 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 501
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL ++ G RVL+F+QMT+ LD
Sbjct: 502 RKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLD 561
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 562 ILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN-----------APNSSKFIFMLSTRAG 610
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 611 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 670
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 671 IKLRLDSIVI 680
>gi|26326731|dbj|BAC27109.1| unnamed protein product [Mus musculus]
Length = 1046
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 187 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 246
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 247 TLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIR------------DEMMPGEWDVCVTSY 294
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 295 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 353
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 354 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 404
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 405 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMHL 460
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL ++ G RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 521 ILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN-----------APNSSKFIFMLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 570 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 629
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 630 IKLRLDSIVI 639
>gi|281344850|gb|EFB20434.1| hypothetical protein PANDA_017908 [Ailuropoda melanoleuca]
Length = 1133
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 459 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 518
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 519 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 571
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 572 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSHHRLLITGTPLQ 630
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 631 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 678
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 679 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 737
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 738 LKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 797
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 798 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 846
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 847 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 906
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 907 ERAKKKMVLDHLVI 920
>gi|149060085|gb|EDM10901.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 1 (predicted) [Rattus
norvegicus]
Length = 985
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 110 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNFPGPHMVLVPKS 169
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 170 TLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIR------------DEMMPGEWDVCVTSY 217
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 218 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 276
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 277 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 327
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 328 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 383
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL ++ G RVL+F+QMT+ LD
Sbjct: 384 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLD 443
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 444 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN-----------APNSSKFIFMLSTRAG 492
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 493 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 552
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 553 IKLRLDSIVI 562
>gi|403225017|ref|NP_001258119.1| probable global transcription activator SNF2L1 [Rattus norvegicus]
Length = 1062
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 187 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNFPGPHMVLVPKS 246
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 247 TLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIR------------DEMMPGEWDVCVTSY 294
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 295 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 353
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 354 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 404
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 405 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 460
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL ++ G RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 521 ILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFN-----------APNSSKFIFMLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 570 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 629
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 630 IKLRLDSIVI 639
>gi|334314376|ref|XP_001365054.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Monodelphis
domestica]
Length = 1975
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 198/494 (40%), Positives = 282/494 (57%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFLV
Sbjct: 625 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLFGPFLV 684
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 685 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 737
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 738 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 796
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F+D GK +E + SL +L F+L
Sbjct: 797 NSLKELWSLLHFIMPEKF----EFWEDFED--------DHGKGRENGYQSLHKVLEPFLL 844
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++VLQK+ Y IL + K L+ +R
Sbjct: 845 RRVKKDVEKSLPAKVEQILRVEMSVLQKQYYKWILTRNY-KALSKGTRGSTSGFLNIVME 903
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 904 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 963
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 964 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 1012
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 1013 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 1072
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 1073 ERAKKKMVLDHLVI 1086
>gi|189458810|ref|NP_001074814.2| chromodomain helicase DNA binding protein 2 [Mus musculus]
Length = 1827
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 210/544 (38%), Positives = 304/544 (55%), Gaps = 78/544 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G + EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GESLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRK---------------------EL 307
RR K+ + + + + E++ LQK+ Y IL + EL
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMEL 758
Query: 308 PKLLAL---------SSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
K S R + + LQ+ +SGKL++LD LL +L G+RVL+F+QM +
Sbjct: 759 KKCCNHCYLIKAPEDSERESGQEVLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVR 818
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++ST
Sbjct: 819 MLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLST 867
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 868 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIE 927
Query: 477 RAERKLRLSHNVVGD-DVVDREVKERTAVETD-------DLRSII-FGLH-LFDPKAINN 526
RA++K+ L H V+ D R V E + ++ +L +I+ FG LF K I
Sbjct: 928 RAKKKMVLDHLVIQRMDTTGRTVLENNSGRSNSNPFNKEELTAILKFGAEDLF--KEIEG 985
Query: 527 EESD 530
EES+
Sbjct: 986 EESE 989
>gi|354465712|ref|XP_003495321.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Cricetulus griseus]
gi|344238589|gb|EGV94692.1| Chromodomain-helicase-DNA-binding protein 2 [Cricetulus griseus]
Length = 1827
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 282/494 (57%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSSHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANH----------------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH + LQ+ +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKAPEENERENGQEVLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>gi|396462858|ref|XP_003836040.1| similar to chromodomain helicase (Chd1) [Leptosphaeria maculans JN3]
gi|312212592|emb|CBX92675.1| similar to chromodomain helicase (Chd1) [Leptosphaeria maculans JN3]
Length = 1610
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 226/630 (35%), Positives = 326/630 (51%), Gaps = 105/630 (16%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ Q++GL++L + G NV+L DEMGLGKT+Q +SF+++L+ + GPF+ + P
Sbjct: 470 GQLRGFQLQGLNFLAHNWCRGTNVILADEMGLGKTVQTVSFINWLRHDRRQDGPFICVVP 529
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +TP + + Y G RE R+I R KE N F+VLLT
Sbjct: 530 LSTMPAWADTFNNWTPDVNYVIYTG-REDARSIIRD-----KELLIDGNPRKTKFNVLLT 583
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ VL D FLS I W + +DEA RLKN S LY+ LR+ F P RLL+TGTPIQN L
Sbjct: 584 TYEYVLADWQFLSSIKWQFLAVDEAHRLKNRESQLYDRLRQ-FNAPSRLLITGTPIQNTL 642
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL ALM F MP DA H + L + +M+RRTK
Sbjct: 643 GELAALMDFLMPGKITVDENVDLASDDASH------------KLAELSEAIQPYMIRRTK 690
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANH-QSLQN-- 325
+K+ LPP +E ++ +Q + Y +IL + AL+ A H QSL N
Sbjct: 691 EKVEND----LPPKSEKILRVELSDIQLEYYKNILTR---NYEALNEGGAGHKQSLLNIV 743
Query: 326 -----------------------------------TASGKLVVLDLLLKKLYNSGHRVLL 350
T SGK+++LD LL KL GHRVL+
Sbjct: 744 MELKKASNHALLFPNAEAKFIRGDATKDETLKALITTSGKMMLLDRLLGKLKADGHRVLI 803
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM LDIL D+L+LR Y ++RLDG++ A ER AI HF+ A G+D +
Sbjct: 804 FSQMVHMLDILTDYLKLRNYPFQRLDGTVPAAERKIAIDHFN-----------APGSDDY 852
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ T+
Sbjct: 853 CFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQQKPVSVYRLVSKDTI 912
Query: 471 EEVIMRRAERKLRLSHNVVGDDVVDREVKE------RTAVE---TDDLRSII--FGLHLF 519
EE I+ RA K L + V DR+ KE R A E DD+ +I+ G +F
Sbjct: 913 EEEILERARNKRMLEFITIQRGVTDRQQKELNDKMSRAAAEPSSADDINNILKRRGQKMF 972
Query: 520 DPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSG---KAGRKFEVNPVALLEESDLLMH 576
+ ++ N ++ ++L +++++E + E+ +G G +F N E +D+ +
Sbjct: 973 E-QSGNQKKLEEL---DIDAVLENAEEHKTEEAAGLTSDGGAEFLKN----FEYTDVKID 1024
Query: 577 ESFASATSYPDLDEASYRSWVEKFKEASES 606
+ DLD + ++ ++K KE E+
Sbjct: 1025 LEWDDIIPKDDLD--AVKADIQKRKEEEET 1052
>gi|324500109|gb|ADY40062.1| Chromodomain-helicase-DNA-binding protein 1 [Ascaris suum]
Length = 1095
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 203/508 (39%), Positives = 285/508 (56%), Gaps = 74/508 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+EG++W++ + + +L DEMGLGKT+Q+I+FLS L GPFLV+ PL
Sbjct: 501 ELRDYQLEGVNWMLHAWSKENSCILADEMGLGKTIQSIAFLSVLFHQYDLYGPFLVVVPL 560
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLLT 154
S W E + L V+ Y+G+ R IR+ M+ + L +VLLT
Sbjct: 561 STMAAWQREFENWACDLNVVTYMGDVTSRDYIRQFEMF--------VQGTKRLKVNVLLT 612
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+++L D+ FL W +DEA RLKN S+LY L + F RLL+TGTP+QN+L
Sbjct: 613 TYEILLKDKAFLGAFEWAVLAVDEAHRLKNDESLLYRSLFD-FSTNHRLLITGTPLQNSL 671
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL+HF MP+ F + + F D H + A SL L F+LRR K
Sbjct: 672 KELWALLHFIMPNKFESWDDFEEDHHDPDHRAIA-----------SLHRKLEPFLLRRVK 720
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRK---ELPK-----------LLALS 314
+ + + LP E +T+ QK+ Y IL K EL K L+
Sbjct: 721 KDVEKS----LPAKVEQILRVDMTIQQKQYYKWILTKNYKELSKGVKGSINGFVNLIMEL 776
Query: 315 SRTANHQSL--------QNT---------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH SL +N +SGKL++LD LL +L+ +GHRVL+F+QM
Sbjct: 777 KKCCNHASLVRAYDHYEENAQARLQQLMKSSGKLILLDKLLCRLHETGHRVLIFSQMVMM 836
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+Q++L+LR++ +RLDGS+RA+ R AA+ HF+ A G+ F F++STR
Sbjct: 837 LDIVQEYLQLRRFPSQRLDGSMRADLRKAALDHFN-----------AEGSTDFCFLLSTR 885
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V LVT+ +VEE I+ R
Sbjct: 886 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQKKQVNIYRLVTKASVEEEIVER 945
Query: 478 AERKLRLSHNVVGD-DVVDREVKERTAV 504
A+RKL L H V+ D R V +++V
Sbjct: 946 AKRKLVLDHLVIQRMDTTGRTVLSKSSV 973
>gi|255726014|ref|XP_002547933.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
gi|240133857|gb|EER33412.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
Length = 1063
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 192/514 (37%), Positives = 287/514 (55%), Gaps = 66/514 (12%)
Query: 15 HDNDERDGQTPV-DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAI 73
H +DE T + ++ + +L+ +QV+GL+WLI Y ++ +L DEMGLGKTLQ I
Sbjct: 117 HQDDEDHQHTVLTESPSYVKEGKLREYQVQGLNWLISLYEDRLSGILADEMGLGKTLQTI 176
Query: 74 SFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE 133
SFL YL++ + GPF+++ P S D W E AK+TP + V+ G++E R I
Sbjct: 177 SFLGYLRYIKHIDGPFIIIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEGRAKI------ 230
Query: 134 HVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
+KEQ + FDVL+T++++VL ++G L + W Y ++DEA R+KN S L ++
Sbjct: 231 -IKEQ-----LYTAQFDVLITSFEMVLREKGALQKFRWEYIVVDEAHRIKNEDSSLSKII 284
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD--AVHSSSAPKR 251
R F RLL+TGTP+QNNL ELWAL++F +P VFG QF F++ + K
Sbjct: 285 R-LFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSAQFDDAFENQPTEDMTEEEKE 343
Query: 252 GKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKE 306
K + L +LS F+LRR K + + +LP + +T +Q Y +L K+
Sbjct: 344 KKQDQAIHELHQLLSPFLLRRVKADVEKS---LLPKIETNVYIGMTDMQVDWYKRLLEKD 400
Query: 307 L-------------PKLLALS---SRTANHQSLQNTA---------------SGKLVVLD 335
+ +LL + + NH L + A SGK+++LD
Sbjct: 401 IDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVFNSGKMIILD 460
Query: 336 LLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQS 395
+LKK G RVL+F+QM++ LDIL+D+ R+Y Y R+DGS E+R AI ++
Sbjct: 461 KMLKKFKAEGSRVLIFSQMSRLLDILEDYCYFREYEYCRIDGSTSHEDRIDAIDEYN--- 517
Query: 396 AIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQ 455
+ ++ F+F+++TRAGG+G+NL +AD VI Y+ DWNPQ D QA+ RAHRIGQ
Sbjct: 518 --------SPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQ 569
Query: 456 MNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
V VTE +EE ++ RA +KLRL V+
Sbjct: 570 KKQVKVYRFVTEMAIEEKVLERAAQKLRLDQLVI 603
>gi|401623518|gb|EJS41615.1| isw2p [Saccharomyces arboricola H-6]
Length = 1115
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 188/499 (37%), Positives = 285/499 (57%), Gaps = 69/499 (13%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ F + +L+ +QV+GL+WLI + ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 170 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GPFL++ P S D W E K+TP + VL G+++ R +I R + +
Sbjct: 230 GPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILQAR---------- 279
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
FDVL+T+Y++V+ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+T
Sbjct: 280 --FDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIR-LFYSKNRLLIT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P +FG F F+ ++S + + +Q L +L+
Sbjct: 337 GTPLQNNLHELWALLNFLLPDIFGDSAIFDEWFE---QNNSEQDQEIVVQQ---LHSVLN 390
Query: 267 AFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------P 308
F+LRR K + + +LP + +T +Q + Y S+L K++
Sbjct: 391 PFLLRRVKSDVEKS---LLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKT 447
Query: 309 KLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LL + + NH L A +GK+++LD LLK+L G RVL+
Sbjct: 448 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNAGKMIILDKLLKRLKEKGSRVLI 507
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R+Y Y R+DGS EER AI ++ ++ F
Sbjct: 508 FSQMSRLLDILEDYCYFREYEYCRIDGSTSHEERIEAIDDYN-----------KPDSEKF 556
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF+++TRAGG+G+NLVAADTVI ++ DWNPQ D QA+ RAHRIGQ V VTE+ +
Sbjct: 557 VFLLTTRAGGLGINLVAADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAI 616
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 617 EEKVIERAAQKLRLDQLVI 635
>gi|321261786|ref|XP_003195612.1| chromodomain helicase [Cryptococcus gattii WM276]
gi|317462086|gb|ADV23825.1| Chromodomain helicase, putative [Cryptococcus gattii WM276]
Length = 1502
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 198/503 (39%), Positives = 279/503 (55%), Gaps = 71/503 (14%)
Query: 23 QTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFS 82
+ P + LKP Q+ GL+WL + G N +L DEMGLGKT+Q++SFLSYL S
Sbjct: 426 KIPENPPYLACGGALKPFQLTGLNWLAYVWSKGENGILADEMGLGKTVQSVSFLSYLFHS 485
Query: 83 QMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMS 142
Q GPFLV+ PLS W S+ K+ P+L V+ Y+G R IR Q +
Sbjct: 486 QHQYGPFLVVVPLSTISAWQSQFKKWAPELNVICYMGSARSRDVIR---------QFEFG 536
Query: 143 NVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRR 202
+ L F+VLLTTY+ +L D+ L QI W +DEA RLKN S LY+ L+ F +
Sbjct: 537 PLKNLKFNVLLTTYEFILKDRQDLQQIKWQVLAVDEAHRLKNHESQLYDALKS-FWSASK 595
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
LL+TGTP+QNN+ EL ALMHF MP F N F ++ +S + KIK+ L
Sbjct: 596 LLITGTPLQNNVKELLALMHFLMPEKFQLANDF------DLNDASEDQGAKIKD----LH 645
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKL------ 310
L+ MLRR K+ +V+ LP + E++ +Q Y +IL K L
Sbjct: 646 DKLTTLMLRRLKKDVVK----ELPTKSERILRVEMSAMQTHYYKNILTKNFAVLSKGGTQ 701
Query: 311 ------LALS-SRTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGH 346
+A+ + +NH L A SGK+V LD+LL +L + GH
Sbjct: 702 QVSLMNVAMELKKASNHPYLFEGAEDRNKPANEILRGLVMNSGKMVCLDMLLSRLKSDGH 761
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDI+ D++ R Y ++RLDG++ ++ R +I HF+ A G
Sbjct: 762 RVLIFSQMVRLLDIISDYMTARGYVHQRLDGTVPSDVRKKSIEHFN-----------APG 810
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+ F F++STRAGG+G+NL ADTVI ++ D+NPQ D QA+ RAHRIGQ HV LV+
Sbjct: 811 SPDFAFLLSTRAGGLGINLETADTVIIFDSDYNPQNDLQAMARAHRIGQQRHVSIFRLVS 870
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
+ T+EE I+ RA RK+ L + ++
Sbjct: 871 KGTIEEDILERAMRKMLLEYAII 893
>gi|410989349|ref|XP_004000924.1| PREDICTED: probable global transcription activator SNF2L1 isoform 1
[Felis catus]
Length = 976
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 272/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 105 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 164
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P + V+ +VG+++ R R + P +DV +T+Y
Sbjct: 165 TLYNWMNEFKRWVPSVRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 212
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 213 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 271
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 272 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 322
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 323 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 378
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 379 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 438
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 439 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NVPNSSKFIFMLST 496
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 497 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 556
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 557 RAEIKLRLDSIVI 569
>gi|344286280|ref|XP_003414887.1| PREDICTED: LOW QUALITY PROTEIN: probable global transcription
activator SNF2L1-like [Loxodonta africana]
Length = 1016
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 196/493 (39%), Positives = 272/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 129 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 188
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 189 TLHNWMNEFKRWVPSLRVICFVGDKDARTAFIR------------DEMMPGEWDVCVTSY 236
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 237 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 295
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 296 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 346
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 347 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 402
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + SGK++VLD LL +L G RVL+F+QMT+ LD
Sbjct: 403 RKCCNHPYLFDGTEPGPPYTTDEHIVINSGKMLVLDKLLARLKEQGSRVLIFSQMTRLLD 462
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 463 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIETF--NAPNSCKFIFMLST 520
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 521 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 580
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 581 RAEIKLRLDSIVI 593
>gi|432115903|gb|ELK37046.1| Putative global transcription activator SNF2L1 [Myotis davidii]
Length = 954
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 196/493 (39%), Positives = 270/493 (54%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y G+N +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 105 LRDYQIRGLNWLISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 164
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 165 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 212
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 213 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 271
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P F + F S F K+ + +R L +L F+LRR K
Sbjct: 272 LWALLNFLLPDAFNSAEDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 322
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 323 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 378
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QM + LD
Sbjct: 379 RKCCNHPYLFDGAEPGPPYTTDEHIVNNSGKMVVLDKLLAKLKEQGSRVLIFSQMIRLLD 438
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 439 ILEDYCMWRGYEYCRLDGQTPHEEREDNFLEVELLGQREAIEAF--NAPNSSKFIFMLST 496
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 497 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 556
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 557 RAEIKLRLDSIVI 569
>gi|351714273|gb|EHB17192.1| Chromodomain-helicase-DNA-binding protein 2 [Heterocephalus glaber]
Length = 1714
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 464 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 523
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 524 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 576
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 577 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 635
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 636 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 683
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 684 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 742
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 743 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 802
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 803 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 851
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 852 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 911
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 912 ERAKKKMVLDHLVI 925
>gi|119622565|gb|EAX02160.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|119622567|gb|EAX02162.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|119622569|gb|EAX02164.1| chromodomain helicase DNA binding protein 2, isoform CRA_a [Homo
sapiens]
gi|239740390|gb|ACS13730.1| chromodomain-helicase-dna-binding protein 2 [Homo sapiens]
Length = 1739
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>gi|2645431|gb|AAB87382.1| CHD2 [Homo sapiens]
Length = 1739
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>gi|291408167|ref|XP_002720326.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1-like isoform 1 [Oryctolagus
cuniculus]
Length = 1053
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 272/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 182 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 241
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 242 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 289
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 290 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 348
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 349 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHSVLKPFLLRRIK 399
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 400 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 455
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK++VLD LL KL G RVL+F+QMT+ LD
Sbjct: 456 RKCCNHPYLFDGAEPGPPYTTDEHIVNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLD 515
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 516 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NVPNSSKFIFMLST 573
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 574 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 633
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 634 RAEIKLRLDSIVI 646
>gi|158259161|dbj|BAF85539.1| unnamed protein product [Homo sapiens]
Length = 1049
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>gi|426257617|ref|XP_004022422.1| PREDICTED: probable global transcription activator SNF2L1 [Ovis
aries]
Length = 976
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 271/493 (54%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 105 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 164
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 165 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 212
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++R+ F RLL+TGTP+QNNL E
Sbjct: 213 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRD-FKSTNRLLLTGTPLQNNLHE 271
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + F S F K+ + +R L +L F+LRR K
Sbjct: 272 LWALLNFLLPDVFNSAEDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 322
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 323 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 378
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 379 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 438
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 439 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NIPNSSKFIFMLST 496
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 497 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 556
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 557 RAEIKLRLDSIVI 569
>gi|84998236|ref|XP_953839.1| SWI/SNF family trascriptional activator protein [Theileria
annulata]
gi|65304836|emb|CAI73161.1| SWI/SNF family trascriptional activator protein, putative
[Theileria annulata]
Length = 1012
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 195/502 (38%), Positives = 284/502 (56%), Gaps = 78/502 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ + KP+Q+EGL WL+ Y+ G+N +L DEMGLGKT Q ISFL+YLK + GP +VL
Sbjct: 174 LVGQSKPYQIEGLKWLVGLYVKGLNGILADEMGLGKTFQTISFLAYLKETFGVHGPHMVL 233
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+SE+ +F P L VL+++G +E+R + YE + P +D+
Sbjct: 234 APKSTIGNWISEINRFCPSLRVLKFIGNKEERTQL--IAYE----------LDPEKYDIF 281
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+ +G L ++ W Y IIDEA R+KN S L V+R F RLL+TGTP+QN
Sbjct: 282 VTSYETCCKAKGPLGRLNWKYLIIDEAHRIKNEESKLSEVVR-LFRTEYRLLITGTPLQN 340
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-------FTSLKGIL 265
NL ELWAL++F P VF + +F + F D V PK +E+ L GIL
Sbjct: 341 NLKELWALLNFLFPVVFSSSEEFETVF-DLV----GPKELTQEEREERNLQIVARLHGIL 395
Query: 266 SAFMLRRTKQKLV----ECGHLMLPPLTEITVLQKKVYASILRKELPKL----------- 310
FMLRR+K+ ++ + L+L + ++ +QK++Y +LRK +P+L
Sbjct: 396 RPFMLRRSKKDVLSDMPQKNELLL--MVPLSAMQKQLYRDLLRKNVPELGVDDNTKSGIH 453
Query: 311 -----LALSSRTA-NHQSL-----------------QNTASGKLVVLDLLLKKLYNSGHR 347
LA+ R A NH L QN SGKL ++D L+ +L + R
Sbjct: 454 VQLLNLAMQLRKACNHPYLFEGYEDRNEDPFGEHVVQN--SGKLSLVDKLIPRLLGNSSR 511
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
+L+F+QM + LDIL+D+ +R Y Y R+DG+ +E+R I F+ ++
Sbjct: 512 ILIFSQMARMLDILEDYCRMRNYLYFRIDGNTSSEDRDYQISSFNQPDSM---------- 561
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
+F++STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ+ V LV +
Sbjct: 562 -VNIFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAIDRAHRIGQLKPVYVYRLVHQ 620
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
+T+EE I+ RA KL+L V+
Sbjct: 621 YTIEEKIIERATMKLQLDTAVI 642
>gi|298714024|emb|CBJ27256.1| probable chromatin remodelling complex ATPase chain [Ectocarpus
siliculosus]
Length = 1563
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 201/515 (39%), Positives = 294/515 (57%), Gaps = 68/515 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +Q+EGL+W++ G N +L DEMGLGKTLQ+IS L+Y++ Q GP ++L P S
Sbjct: 260 MRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSISILAYMRDFQNVTGPHIILLPKS 319
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRR-NIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
V W E +F P + VLR G +++R IR + E + +DVL+TT
Sbjct: 320 VLGNWQLEFKRFCPDIRVLRLSGTKDERAATIRNDLKPGSPEDER-------DWDVLVTT 372
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+V +++ +L++I W Y IIDEA RLKN SS+ +RE RLL+TGTP+QNNL
Sbjct: 373 YEVANIEKTYLNKIGWRYLIIDEAHRLKNESSLFSMTVRE-LTTQYRLLLTGTPLQNNLH 431
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL++F +P+VF F F V + K+ IK+ L IL FMLRR K+
Sbjct: 432 ELWALLNFLLPTVFQDSEAFSKVFDLNVDDADK-KQNMIKQ----LHKILRPFMLRRLKK 486
Query: 276 KLVECGHLMLPP------LTEITVLQKKVYASILRKELPKLLALSS-RTA---------- 318
++ + LPP T ++ +Q+KVY +L +++ + S+ RTA
Sbjct: 487 EVEKS----LPPKEETILFTSMSEVQRKVYKGVLMRDIDTINGTSAGRTAILNIVMQLRK 542
Query: 319 --NHQSL-QNTA--------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L NT GK+++LD LL +L +GHRVL+F+QMT+ +DIL
Sbjct: 543 CCNHPYLFPNTEDRNLDPMGEHLVENCGKMILLDKLLTRLKAAGHRVLVFSQMTRMMDIL 602
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D + +R+Y Y R+DG+ + R I ++ A G++ F+F++STRAGG+
Sbjct: 603 EDLMHMREYKYCRIDGNTPHDTRQDLIEEYN-----------APGSEKFIFLLSTRAGGL 651
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL +ADT I Y+ DWNPQ D QA R HRIGQ V LVTE T+EE ++ RA++K
Sbjct: 652 GINLQSADTCILYDSDWNPQADLQAQDRCHRIGQTKTVKVYRLVTEDTIEEKVVERAQQK 711
Query: 482 LRLSHNVVGDDVVDREVKERTAVETDD-LRSIIFG 515
L+L VV ++ E K +E D+ L +I FG
Sbjct: 712 LKLDAMVVQRGMLQGEKK----LEKDEMLAAIRFG 742
>gi|449471687|ref|XP_002197759.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Taeniopygia
guttata]
Length = 1794
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 283/494 (57%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFLV
Sbjct: 442 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLV 501
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + QS+ L F+
Sbjct: 502 VVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIRE--YEWIHSQSKR-----LKFNA 554
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +D+A RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 555 LITTYEILLKDKTVLGSINWAFLGVDQAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 613
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 614 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 661
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K L+ +R
Sbjct: 662 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALSKGTRGSTSGFLNIVME 720
Query: 317 ---TANH----------------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH ++LQ+ +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 721 LKKCCNHCYLIKPPEENERENGLETLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 780
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 781 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 829
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 830 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 889
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 890 ERAKKKMVLDHLVI 903
>gi|328861599|gb|EGG10702.1| hypothetical protein MELLADRAFT_22404 [Melampsora larici-populina
98AG31]
Length = 1154
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 205/525 (39%), Positives = 289/525 (55%), Gaps = 78/525 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK QV GL+WL + G N +L DEMGLGKT+Q +FLSYL + GPFLV+
Sbjct: 161 VGGTLKDFQVTGLNWLAYVWHKGQNGILADEMGLGKTVQTCAFLSYLFHTMEQYGPFLVV 220
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W + A++ P L V+ Y+G + R+ IR + K+ + F+VL
Sbjct: 221 VPLSTLPAWQMQCAQWAPDLNVVAYIGNKSSRKTIREYEFGPSKK---------IKFNVL 271
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+++L D+ LS I W Y +DEA RLK+ S LY L F + +LL+TGTP+QN
Sbjct: 272 LTTYEIILKDRADLSHIKWQYLAVDEAHRLKSSESQLYEALMS-FNIQAKLLITGTPLQN 330
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
N+ EL ALMHF P F L++ +D K KIK+ T L+ I MLRR
Sbjct: 331 NVKELLALMHFLQPDKFD-LSEGHFDLEDE------EKERKIKDLHTKLQSI----MLRR 379
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS----------- 315
K+ +V+ LP +E ++ +Q Y +IL K L + S
Sbjct: 380 LKKDVVQS----LPTKSERILRVEMSEMQMYWYKAILTKNYALLASTDSQVSLLNVAMEL 435
Query: 316 -RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ +NH L A SGK+++LD LL +L GHRVL+F+QM +
Sbjct: 436 KKASNHPFLFPGAEPKTDTKETTLKGLVVNSGKMILLDKLLTRLKAEGHRVLIFSQMVRM 495
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+ D++ LR Y ++RLDG++ +EER AI HF+ + + F F++STR
Sbjct: 496 LDIMSDYMSLRGYIFQRLDGTVASEERRKAIGHFNAPDSPD-----------FAFLLSTR 544
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV LVT+ TVEE ++ R
Sbjct: 545 AGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKNHVNVYRLVTKDTVEEDVLER 604
Query: 478 AERKLRLSHNVV------GDDVVDREVKERTAVETDDLRSII-FG 515
A+RK+ L + ++ G +V +E + +DL +I+ FG
Sbjct: 605 AKRKMILEYAIINQMDTSGKNVGKKEAPKTQQFNKEDLSAILKFG 649
>gi|403258156|ref|XP_003921642.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Saimiri
boliviensis boliviensis]
Length = 1827
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>gi|119622570|gb|EAX02165.1| chromodomain helicase DNA binding protein 2, isoform CRA_d [Homo
sapiens]
Length = 1857
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 443 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 502
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 503 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 555
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 556 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 614
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 615 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 662
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 663 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 721
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 722 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 781
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 782 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 830
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 831 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 890
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 891 ERAKKKMVLDHLVI 904
>gi|189189128|ref|XP_001930903.1| chromo domain-containing protein 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972509|gb|EDU40008.1| chromo domain-containing protein 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1570
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 225/655 (34%), Positives = 333/655 (50%), Gaps = 100/655 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ Q++G+++L + G NV+L DEMGLGKT+Q +SF+++L+ + GP + + P
Sbjct: 441 GQLRSFQLQGVNFLAHNWCRGTNVILADEMGLGKTVQTVSFINWLRHDRHQDGPMICVVP 500
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +TP + + Y G E R IR KE N + F+VLLT
Sbjct: 501 LSTMPAWADTFNNWTPDVNYVIYTGREEARAIIRD------KELLVDGNTKKIKFNVLLT 554
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ VL D FL I W + +DEA RLKN S LY+ LR+ F P RLL+TGTPIQN L
Sbjct: 555 TYEYVLADWQFLQSIKWQFLAVDEAHRLKNRDSQLYDRLRQ-FNAPCRLLITGTPIQNTL 613
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL ALM F MP +DA + L + +M+RRTK
Sbjct: 614 GELAALMDFLMPGKISVDEHVDLASEDASR------------KLAELSDAIQPYMIRRTK 661
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASIL--------------RKELPKLLALS 314
+K+ LPP + E++ +Q + Y +IL ++ L ++
Sbjct: 662 EKVEND----LPPKSEKILRVELSDIQLEYYKNILTRNYEALNEGGVGHKQSLLNIVMEL 717
Query: 315 SRTANHQSL----QN-----------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ +NH L +N T+SGK+++LD LL KL GHRVL+F+Q
Sbjct: 718 KKASNHALLFPNAENKLVKPGSSKEETLKALITSSGKMMLLDRLLGKLKADGHRVLIFSQ 777
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M LDIL D+L+LR YS++RLDG++ A +R AI HF+ A G++ + F+
Sbjct: 778 MVHMLDILTDYLKLRNYSFQRLDGTVPAADRKIAIDHFN-----------APGSEDYCFL 826
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++ T+EE
Sbjct: 827 LSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQQKPVSVYRLVSKDTIEEE 886
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKE------RTAVE---TDDLRSII--FGLHLFDPK 522
I+ RA K L + V DR+ KE R A E DD+ +I+ G +F+ +
Sbjct: 887 ILERARNKRMLEFITIQRGVTDRQQKELNDKMSRAAAEPNSADDINNILKRRGQKMFE-Q 945
Query: 523 AINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAG-------RKFEVNPVAL-LEESDLL 574
+ N ++ ++L ++S++E + EQ +G + FE V + LE D++
Sbjct: 946 SGNQKKLEEL---DIDSVLENAEEHKTEQAAGLTSDGGEEFLKNFEYTDVKIDLEWDDII 1002
Query: 575 MHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRRSPEDKQRKLEA 629
E + + D+ + +K E S A S R K+R LEA
Sbjct: 1003 PKEELEAVKA--DIQQRKDEEETQKLLEESAPRKRKAASSSAREQRAAKKRALEA 1055
>gi|118421089|ref|NP_001262.3| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Homo
sapiens]
gi|119370320|sp|O14647.2|CHD2_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 2;
Short=CHD-2; AltName: Full=ATP-dependent helicase CHD2
gi|225000176|gb|AAI72425.1| Chromodomain helicase DNA binding protein 2 [synthetic construct]
Length = 1828
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>gi|355693011|gb|EHH27614.1| Chromodomain-helicase-DNA-binding protein 2 [Macaca mulatta]
gi|355778318|gb|EHH63354.1| Chromodomain-helicase-DNA-binding protein 2 [Macaca fascicularis]
gi|380809122|gb|AFE76436.1| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Macaca
mulatta]
gi|383415421|gb|AFH30924.1| chromodomain-helicase-DNA-binding protein 2 isoform 1 [Macaca
mulatta]
Length = 1828
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>gi|410225782|gb|JAA10110.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
gi|410301988|gb|JAA29594.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
gi|410351375|gb|JAA42291.1| chromodomain helicase DNA binding protein 2 [Pan troglodytes]
Length = 1828
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>gi|449273767|gb|EMC83176.1| putative global transcription activator SNF2L1, partial [Columba
livia]
Length = 982
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +QV GL+W+I Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 107 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 166
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L + +G+++ R R + + P +DV +T+Y
Sbjct: 167 TLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDV------------MMPGEWDVCVTSY 214
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 215 EMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNLHE 273
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 274 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 324
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 325 AEVEKS----LPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQL 380
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK++VLD LL KL G RVLLF+QMT+ LD
Sbjct: 381 RKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLD 440
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 441 ILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN-----------APNSSKFIFMLSTRAG 489
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 490 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 549
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 550 IKLRLDSIVI 559
>gi|397491801|ref|XP_003816832.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2 [Pan paniscus]
Length = 1829
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>gi|406604429|emb|CCH44088.1| chromatin-remodeling complex ATPase [Wickerhamomyces ciferrii]
Length = 965
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 195/533 (36%), Positives = 294/533 (55%), Gaps = 82/533 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+ +Q++GL+WLI+ Y ++ +L DEMGLGKTLQ ISFL YL++++ GPFL++
Sbjct: 20 VHGKLREYQIQGLNWLIQLYENSLSGILADEMGLGKTLQTISFLGYLRYNKNIDGPFLII 79
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRN-IRRTMYEHVKEQSQMSNVSPLPFDV 151
P S D W E ++TP + V G +E+R + I+ T+ E FDV
Sbjct: 80 VPKSTLDNWRREFERWTPDVNVCVLQGNKEERNDLIKNTILE-------------TKFDV 126
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+T++++V+ ++ L ++ W Y ++DEA R+KN S L ++R F RLL+TGTP+Q
Sbjct: 127 LVTSFEMVIREKSALKKLAWQYIVVDEAHRIKNEESALSQIIR-LFYSKNRLLITGTPLQ 185
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NNL ELWAL++F +P VFG F F++ L +L+ F+LR
Sbjct: 186 NNLHELWALLNFILPDVFGDSEVFDQWFENQEDDQDLV--------IQQLHKVLNPFLLR 237
Query: 272 RTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLA 312
R K + + L P E+ + +Q K Y +L K++ +LL
Sbjct: 238 RVKSDVEKS----LLPKKEVNLYVGMSEMQVKWYQKLLEKDIDAVNGVVGKREGKTRLLN 293
Query: 313 LS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQM 354
+ + NH L A SGK+V+LD LLKK+ G RVL+F+QM
Sbjct: 294 IVMQLRKCCNHPYLFEGAEPGPPFTTDEHLVFNSGKMVILDKLLKKMKEQGSRVLIFSQM 353
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
++ LDIL+D+ R Y Y R+DGS E+R AAI ++ + D F+F++
Sbjct: 354 SRVLDILEDYCFFRDYEYCRIDGSTSHEDRIAAIDDYNKPDS-----------DKFIFLL 402
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
+TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VTE +EE +
Sbjct: 403 TTRAGGLGINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVMVFRFVTEDAIEEKV 462
Query: 475 MRRAERKLRLSHNVVGDDVVDREVKERTAV--ETDDLRSII-FGL-HLFDPKA 523
+ RA +KLRL V+ R V + +A+ +DL S+I FG ++F+ K+
Sbjct: 463 IERATQKLRLDQLVIQQ---GRAVNKNSAIGNNKEDLLSMIQFGAKNVFENKS 512
>gi|169607597|ref|XP_001797218.1| hypothetical protein SNOG_06857 [Phaeosphaeria nodorum SN15]
gi|160701447|gb|EAT85508.2| hypothetical protein SNOG_06857 [Phaeosphaeria nodorum SN15]
Length = 1249
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 228/659 (34%), Positives = 333/659 (50%), Gaps = 104/659 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ Q++G+++L + G NV+L DEMGLGKT+Q +SF+++L+ + GPF+ + P
Sbjct: 119 GKLRAFQLQGVNFLAHNWCRGTNVILADEMGLGKTVQTVSFMNWLRHDRRQDGPFICVVP 178
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +TP + + Y G + R IR KE N + F+VLLT
Sbjct: 179 LSTMPAWADTFNNWTPDVNYVIYTGREDARSTIRD------KELLVDGNPRKIKFNVLLT 232
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ VL D FLS I W + +DEA RLKN S LY L + F P RLL+TGTPIQN L
Sbjct: 233 TYEYVLADWQFLSSIKWQFLAVDEAHRLKNRESQLYERLLQ-FNAPSRLLITGTPIQNTL 291
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL ALM F MP T + V +S K+ E L + +M+RRTK
Sbjct: 292 GELSALMDFLMPGKI--------TVDENVDMASEDASYKLAE----LSEAIQPYMIRRTK 339
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQSLQN--- 325
+K+ LPP +E ++ +Q + Y +IL + L T + QSL N
Sbjct: 340 EKVEND----LPPKSEKILRVELSDIQLEYYKNILTRNYEALN--EGGTGHKQSLLNIVM 393
Query: 326 ----------------------------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
T SGK+++LD LL KL GHRVL+F
Sbjct: 394 ELKKASNHALLFPNAEAKFLKENATKDETLKALITTSGKMMLLDRLLTKLKADGHRVLIF 453
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QM LDIL D+L+LR Y+Y+RLDG++ A +R AI HF+ A G+D +
Sbjct: 454 SQMVHMLDILTDYLKLRNYTYQRLDGTVPASDRKIAIDHFN-----------APGSDDYC 502
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++ T+E
Sbjct: 503 FLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQQKPVSVYRLVSKDTIE 562
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDREVKE------RTAVE---TDDLRSII--FGLHLFD 520
E I+ RA K L + V DR+ +E R A E DD+ +I+ G +F+
Sbjct: 563 EEILERARNKRMLEFITIQRGVTDRQQQELNDKMSRAAAEPNSADDINNILKRRGQKMFE 622
Query: 521 PKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAG-------RKFEVNPVAL-LEESD 572
++ N ++ ++L +++++E + EQ +G + FE V L LE D
Sbjct: 623 -QSGNQKKLEEL---DIDAVLENAEEHKTEQAAGLTSDGGAEFLKNFEYTDVKLDLEWDD 678
Query: 573 LLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRRSPEDKQRKLEAAR 631
++ E + ++ + +K E S A S R K+R +EA+R
Sbjct: 679 IIPKEELEVVKA--EIQQRRDEEETQKLLEESAPRKRKAASSSAREQRAAKKRAMEASR 735
>gi|449546909|gb|EMD37878.1| chromodomain-helicase DNA-binding protein [Ceriporiopsis
subvermispora B]
Length = 1434
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/494 (39%), Positives = 271/494 (54%), Gaps = 71/494 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + G N +L DEMGLGKT+Q +SFLSYL + GPFLV+ P
Sbjct: 371 GELKDFQLTGLNWLAYLWSKGDNGILADEMGLGKTVQTVSFLSYLFHEKQQYGPFLVIVP 430
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W S+ A ++P + V+ Y+G R IR + ++ +M L +VLLT
Sbjct: 431 LSTITAWQSQFATWSPDINVITYIGTATAREVIRTHEFGQTSKKYKM-----LKMNVLLT 485
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++VL D L I W +DEA RLKN S LY LR F +LL+TGTP+QNN+
Sbjct: 486 TYEIVLRDSKELGDIKWQVLAVDEAHRLKNSESQLYEALRS-FSAASKLLITGTPLQNNV 544
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F N+F D H KIKE L L + MLRR K
Sbjct: 545 KELLSLMHFLMPEKFLLTNEF--DLTDVDHEE------KIKE----LHKQLESLMLRRLK 592
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ ++ LP E ++ LQ Y +IL K L+ ++
Sbjct: 593 KDVLTS----LPTKNERILRVEMSGLQTHFYKNILTKNFQGLVKSANGNNNISLLNIAME 648
Query: 316 --RTANHQSL--------QNT---------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L NT +SGK+V+LD LL +L GHRVL+F+QM +
Sbjct: 649 LKKAANHPYLFDGAETRTDNTEETLKGLVMSSGKMVLLDKLLARLRQDGHRVLIFSQMVR 708
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++ LR Y ++RLDG + +E R +I HF+ A G+ F F++ST
Sbjct: 709 MLDILSDYMSLRGYQHQRLDGMVSSEARKKSIAHFN-----------APGSPDFAFLLST 757
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE ++
Sbjct: 758 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLE 817
Query: 477 RAERKLRLSHNVVG 490
RA++K+ L + ++
Sbjct: 818 RAKKKMVLEYAIIN 831
>gi|327273932|ref|XP_003221733.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like [Anolis
carolinensis]
Length = 1036
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 274/490 (55%), Gaps = 70/490 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +VL P
Sbjct: 161 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 220
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E ++ P L + +G++EQR R + + P +DV +T
Sbjct: 221 KSTLHNWMNEFKRWVPTLRAVCLIGDKEQRAAFVRDV------------LLPGEWDVCVT 268
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL
Sbjct: 269 SYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNL 327
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + F S F +++ K+ E+ L +L F+LRR K
Sbjct: 328 HELWALLNFLLPDVFNSAEDFDSWF----DTNNCLGDQKLVER---LHLVLRPFLLRRIK 380
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 381 AEVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQL 436
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK+VVLD LL KL G R+L+F+QMT+ LD
Sbjct: 437 RKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRILIFSQMTRVLD 496
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG +ER A+I Y+E G + FVFM+STRAG
Sbjct: 497 ILEDYCMWRNYEYCRLDGQTPHDERQASIN----------AYNEPGSS-KFVFMLSTRAG 545
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVEE I+ RAE
Sbjct: 546 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAE 605
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 606 MKLRLDSIVI 615
>gi|330916188|ref|XP_003297327.1| hypothetical protein PTT_07688 [Pyrenophora teres f. teres 0-1]
gi|311330071|gb|EFQ94584.1| hypothetical protein PTT_07688 [Pyrenophora teres f. teres 0-1]
Length = 1580
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 230/663 (34%), Positives = 340/663 (51%), Gaps = 103/663 (15%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D +FG +L+ Q++G+++L + G NV+L DEMGLGKT+Q +SF+++L+ +
Sbjct: 446 DYIKFG---QLRSFQLQGVNFLAHNWCRGTNVILADEMGLGKTVQTVSFINWLRHDRHQD 502
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP + + PLS W +TP + + Y G E R IR KE N
Sbjct: 503 GPMICVVPLSTMPAWADTFNNWTPDVNYVIYTGREEARAIIRD------KELLVDGNTKK 556
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+ F+VLLTTY+ VL D FL I W + +DEA RLKN S LY+ LR+ F P RLL+T
Sbjct: 557 IKFNVLLTTYEYVLADWQFLQSIKWQFLAVDEAHRLKNRDSQLYDRLRQ-FNAPCRLLIT 615
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTPIQN L EL ALM F MP T + V +S K+ E L +
Sbjct: 616 GTPIQNTLGELAALMDFLMPGKI--------TVDEHVDLASEDASQKLAE----LSSAIQ 663
Query: 267 AFMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASIL--------------RKE 306
+M+RRTK+K+ LPP + E++ +Q + Y +IL ++
Sbjct: 664 PYMIRRTKEKVEND----LPPKSEKILRVELSDIQLEYYKNILTRNYEALNEGGVGHKQS 719
Query: 307 LPKLLALSSRTANHQSL----QN-----------------TASGKLVVLDLLLKKLYNSG 345
L ++ + +NH L +N T+SGK+++LD LL KL G
Sbjct: 720 LLNIVMELKKASNHALLFPNAENKLVKPGSSKEETLKALITSSGKMMLLDRLLGKLKADG 779
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
HRVL+F+QM LDIL D+L+LR YS++RLDG++ A +R AI HF+ A
Sbjct: 780 HRVLIFSQMVHMLDILTDYLKLRNYSFQRLDGTVPAADRKIAIDHFN-----------AP 828
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
G++ + F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV
Sbjct: 829 GSEDYCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQQKPVSVYRLV 888
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE------RTAVE---TDDLRSII--F 514
++ T+EE I+ RA K L + V DR+ KE R A E DD+ +I+
Sbjct: 889 SKDTIEEEILERARNKRMLEFITIQRGVTDRQQKELNDKMSRAAAEPNSADDINNILKRR 948
Query: 515 GLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAG-------RKFEVNPVAL 567
G +F+ ++ N ++ ++L ++S++E + EQ +G + FE V +
Sbjct: 949 GQKMFE-QSGNQKKLEEL---DIDSVLENAEEHKTEQAAGLTSDGGEEFLKNFEYTDVKI 1004
Query: 568 -LEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRRSPEDKQRK 626
LE D++ E + + D+ + +K E S S R K+R
Sbjct: 1005 DLEWDDIIPKEELEAVKA--DIQQRKDEEETQKLLEESAPRKRKAVSSSAREQRAAKKRA 1062
Query: 627 LEA 629
LEA
Sbjct: 1063 LEA 1065
>gi|118089662|ref|XP_420329.2| PREDICTED: probable global transcription activator SNF2L1 [Gallus
gallus]
Length = 1031
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +QV GL+W+I Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 156 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 215
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L + +G+++ R R + + P +DV +T+Y
Sbjct: 216 TLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDV------------MMPGEWDVCVTSY 263
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 264 EMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNLHE 322
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 323 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 373
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 374 AEVEKS----LPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQL 429
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK++VLD LL KL G RVLLF+QMT+ LD
Sbjct: 430 RKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLD 489
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 490 ILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN-----------APNSSKFIFMLSTRAG 538
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 539 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 598
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 599 IKLRLDSIVI 608
>gi|444730344|gb|ELW70731.1| Chromodomain-helicase-DNA-binding protein 2 [Tupaia chinensis]
Length = 1104
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 469 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 528
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 529 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 581
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 582 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 640
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 641 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 688
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 689 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 747
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 748 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 807
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 808 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 856
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 857 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 916
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 917 ERAKKKMVLDHLVI 930
>gi|328862601|gb|EGG11702.1| hypothetical protein MELLADRAFT_115234 [Melampsora larici-populina
98AG31]
Length = 1138
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 185/494 (37%), Positives = 273/494 (55%), Gaps = 73/494 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +Q++GL+W++ + G+N +L DEMGLGKTLQ ISFL YLK + GP LV+ P S
Sbjct: 203 MRDYQIQGLNWMVSLFHNGINGILADEMGLGKTLQTISFLGYLKHHRSLAGPHLVIVPKS 262
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
D W E + P ++ G +E+R I +T + FDV+LTTY
Sbjct: 263 TLDNWHREFNFWVPGFNIVSLKGSKEERNEICQT------------KILTQDFDVILTTY 310
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L ++G L ++ W Y +IDEA R+KN S+L ++R F RLL+TGTP+QNNL E
Sbjct: 311 ELCLREKGSLKRVAWEYIVIDEAHRIKNVDSMLSQIVR-LFQSRARLLITGTPLQNNLQE 369
Query: 217 LWALMHFCMPSVFGTLNQFLSTFK----DAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
LWAL++F +P VF + F + F+ SSS + +K+ L +L F+LRR
Sbjct: 370 LWALLNFLLPDVFSSSEDFDAWFQRERGTNAESSSDAENSVVKQ----LHKVLRPFLLRR 425
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSR---------- 316
K + + L P EI V +Q+K Y IL K++ + ++ +
Sbjct: 426 VKADVEKS----LLPKKEINVYVGMTEMQRKWYKMILEKDIDAVNGVTGKKEGKTRLMNV 481
Query: 317 ------TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L + A SGK+++LD LLK + G RVL+F+QM+
Sbjct: 482 VMQLRKCCNHPYLFDGAEPGPPFTTDEHLVFNSGKMIILDKLLKAMKAKGSRVLIFSQMS 541
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ R+Y Y R+DGS + EER AI ++ + G+ F+F+++
Sbjct: 542 RVLDILEDYCLFREYEYCRIDGSTQHEERIGAIDEYNKE-----------GSSKFIFLLT 590
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AD V+ ++ DWNPQ D QA+ RAHRIGQ V VTE+ VEE ++
Sbjct: 591 TRAGGLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQKKQVYVFRFVTENAVEEKVL 650
Query: 476 RRAERKLRLSHNVV 489
RA +KLRL V+
Sbjct: 651 ERAAQKLRLDQLVI 664
>gi|73951131|ref|XP_536179.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 1
[Canis lupus familiaris]
Length = 1827
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSHHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>gi|296471282|tpg|DAA13397.1| TPA: SWI/SNF related, matrix associated, actin dependent regulator
of chromatin, subfamily a, member 1 [Bos taurus]
Length = 1057
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 271/493 (54%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 186 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 245
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 246 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 293
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++R+ F RLL+TGTP+QNNL E
Sbjct: 294 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRD-FKSTNRLLLTGTPLQNNLHE 352
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + F S F K+ + +R L +L F+LRR K
Sbjct: 353 LWALLNFLLPDVFNSAEDFDSWFDTKNCLGDQKLVER---------LHTVLKPFLLRRIK 403
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 404 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 459
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 460 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NIPNSSKFIFMLST 577
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 578 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 637
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 638 RAEIKLRLDSIVI 650
>gi|330864739|ref|NP_001178471.1| probable global transcription activator SNF2L1 [Bos taurus]
Length = 1051
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 271/493 (54%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 186 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 245
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 246 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 293
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++R+ F RLL+TGTP+QNNL E
Sbjct: 294 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRD-FKSTNRLLLTGTPLQNNLHE 352
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + F S F K+ + +R L +L F+LRR K
Sbjct: 353 LWALLNFLLPDVFNSAEDFDSWFDTKNCLGDQKLVER---------LHTVLKPFLLRRIK 403
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 404 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 459
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 460 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 519
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 520 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NIPNSSKFIFMLST 577
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 578 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 637
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 638 RAEIKLRLDSIVI 650
>gi|417405705|gb|JAA49556.1| Putative chromatin remodeling complex swi/snf component swi2
[Desmodus rotundus]
Length = 1052
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 194/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I F+ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAFNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|224104242|ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222849777|gb|EEE87324.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1748
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 202/575 (35%), Positives = 308/575 (53%), Gaps = 89/575 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+EGL++L+ + NV+L DEMGLGKT+Q++S L +L+ +Q GPFLV+ P
Sbjct: 617 GKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQISGPFLVVVP 676
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W E K+ P + V+ YVG R R + + P+ F LLT
Sbjct: 677 LSTLSNWAKEFRKWLPDMNVIVYVGTRASRERVGQ----------------PIKFSALLT 720
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+VVL D+ LS+I W Y ++DEA RLKN + LY L E F +LL+TGTP+QN++
Sbjct: 721 TYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLE-FSTKNKLLITGTPLQNSV 779
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL+HF P F + + F+ +K+ + + + +L L +LRR
Sbjct: 780 EELWALLHFLDPDKFRSKDDFVHNYKNLSSFN--------ENELANLHMELRPHILRRVI 831
Query: 275 QKLVECGHLMLPP------LTEITVLQKKVYASILRKE--------------LPKLLALS 314
+ + + LPP E++ LQK+ Y IL + L ++
Sbjct: 832 KDVEKS----LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVEL 887
Query: 315 SRTANHQSLQNTA----------------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
+ NH L +A SGKLV+LD LL +L+ + HRVL+F+
Sbjct: 888 KKCCNHPFLFESADHGYGGDISTNDSSKLERIILSSGKLVILDKLLVRLHETKHRVLIFS 947
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM + LDI+ ++ LR + ++RLDGS +AE R A+ HF+ A G+D F F
Sbjct: 948 QMVRMLDIIAQYMSLRGFQFQRLDGSTKAELRQQAMEHFN-----------APGSDDFCF 996
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V VT +VEE
Sbjct: 997 LLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEE 1056
Query: 473 VIMRRAERKLRLSHNVVGD-----DVVDREVKERTAVETDDLRSII-FGLHLFDPKAINN 526
I+ RA++K+ L H V+ + +E K+ + + ++L +I+ FG + N+
Sbjct: 1057 DILERAKKKMVLDHLVIQKLNAEGRLEKKETKKGSYFDKNELSAILRFGAEELFKEDRND 1116
Query: 527 EESDDLRLS-GLNSMVEKVIAMRHEQVSGKAGRKF 560
EES LS ++ ++E+ + ++ G+ G +
Sbjct: 1117 EESKKRLLSMDIDEILERAEKVEEKEAGGEQGNEL 1151
>gi|440894888|gb|ELR47213.1| Putative global transcription activator SNF2L1, partial [Bos
grunniens mutus]
Length = 996
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 271/493 (54%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 125 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 184
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 185 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 232
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++R+ F RLL+TGTP+QNNL E
Sbjct: 233 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRD-FKSTNRLLLTGTPLQNNLHE 291
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + F S F K+ + +R L +L F+LRR K
Sbjct: 292 LWALLNFLLPDVFNSAEDFDSWFDTKNCLGDQKLVER---------LHTVLKPFLLRRIK 342
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 343 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 398
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 399 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 458
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 459 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NIPNSSKFIFMLST 516
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 517 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 576
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 577 RAEIKLRLDSIVI 589
>gi|390464184|ref|XP_002806940.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2 [Callithrix jacchus]
Length = 2054
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>gi|392593853|gb|EIW83178.1| transcription regulator [Coniophora puteana RWD-64-598 SS2]
Length = 1321
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 199/494 (40%), Positives = 271/494 (54%), Gaps = 74/494 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + GVN +L DEMGLGKT+Q +SFLSYL GPFLV+ P
Sbjct: 265 GELKDFQLTGLNWLAYSWSEGVNGILADEMGLGKTVQTVSFLSYLFHEMQQYGPFLVIVP 324
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W S+ A + P + V+ Y+G R IR YE + L +VLLT
Sbjct: 325 LSTITAWQSQFATWAPDINVITYIGTAAAREVIR--TYEFGASNKK------LKMNVLLT 376
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++VL D L+ I W I+DEA RLKN S LY LR F +LL+TGTP+QNN+
Sbjct: 377 TYELVLRDAKELADIKWHALIVDEAHRLKNSESQLYEALRS-FPSASKLLITGTPLQNNV 435
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F ++F DA H KIKE L L + MLRR K
Sbjct: 436 KELLSLMHFLMPEKFALSDEF--DLNDADHEE------KIKE----LHKQLESLMLRRLK 483
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ ++ LP +E ++ LQ Y +IL K L+ ++
Sbjct: 484 RDVLTS----LPTKSERILRVEMSALQTHFYKNILTKNFQGLVKSANGNNNISLLNIAME 539
Query: 316 --RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L + A SGK+V+LD LL +L GHRVL+F+QM +
Sbjct: 540 LKKAANHPYLFDGAEARTDNQEETLKGLVMNSGKMVLLDKLLARLRQDGHRVLIFSQMVR 599
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++ LR Y ++RLDG + ++ R +I HF+ A G+ F F++ST
Sbjct: 600 MLDILSDYMNLRGYQHQRLDGMVASDIRKKSIAHFN-----------APGSPDFAFLLST 648
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ TVEE ++
Sbjct: 649 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTVEEDVLE 708
Query: 477 RAERKLRLSHNVVG 490
RA++K+ L + ++
Sbjct: 709 RAKKKMILEYAIIN 722
>gi|389741854|gb|EIM83042.1| hypothetical protein STEHIDRAFT_160649 [Stereum hirsutum FP-91666
SS1]
Length = 1484
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 201/494 (40%), Positives = 276/494 (55%), Gaps = 76/494 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP-GPFLVLC 93
+LK Q+ GL+WL + G N +L DEMGLGKT+Q ++FLSYL F QM+ GPFLV+
Sbjct: 426 GKLKDFQLTGLNWLAYLWCHGENGILADEMGLGKTVQTVAFLSYL-FHQMNQYGPFLVIV 484
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
PLS W S+ A + P+L V+ Y+G R IR YE + L +VLL
Sbjct: 485 PLSTITAWQSQFATWAPELNVITYIGTATAREIIR--TYEFGPSNKK------LKMNVLL 536
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY++ L D L +I W +DEA RLKN S LY LR F +LL+TGTP+QNN
Sbjct: 537 TTYELTLRDSKELGEIKWQVLAVDEAHRLKNSESQLYEALRS-FSAASKLLITGTPLQNN 595
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ EL +LMHF MP F N+F DA H + KI+E L L + MLRR
Sbjct: 596 VKELLSLMHFLMPEKFALTNEF--DLNDADHET------KIQE----LHKQLESLMLRRL 643
Query: 274 KQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------ 315
K+ ++ LP +E ++ LQ Y +IL K L+ ++
Sbjct: 644 KRDVLTS----LPTKSERILRVEMSGLQTHFYKNILTKNFSALVKSANGNNNISLLNIAM 699
Query: 316 ---RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ ANH L + A SGK+V+LD LL +L + GHRVL+F+QM
Sbjct: 700 ELKKAANHPYLFDGAEVKADANEEVLKGLVMNSGKMVLLDKLLARLRSDGHRVLIFSQMV 759
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL D+L LR Y ++RLDG + +E R +I HF+ A G+ FVF++S
Sbjct: 760 RMLDILTDYLTLRGYQHQRLDGMVASEARKKSIAHFN-----------APGSPDFVFLLS 808
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ TVEE ++
Sbjct: 809 TRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTVEEDVL 868
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L + ++
Sbjct: 869 ERAKKKMVLEYAII 882
>gi|151945386|gb|EDN63629.1| ATPase component of a two subunit chromatin remodeling complex
[Saccharomyces cerevisiae YJM789]
Length = 1120
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 283/499 (56%), Gaps = 69/499 (13%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ F + +L+ +QV+GL+WLI + ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 174 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GPFL++ P S D W E K+TP + VL G+++ R +I R + +
Sbjct: 234 GPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEAR---------- 283
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
FDVL+T+Y++V+ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+T
Sbjct: 284 --FDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIR-LFYSKNRLLIT 340
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P +FG F F+ ++S + + +Q L +L+
Sbjct: 341 GTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE---QNNSEQDQEIVVQQ---LHSVLN 394
Query: 267 AFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------P 308
F+LRR K + +LP + +T +Q + Y S+L K++
Sbjct: 395 PFLLRRVK---ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKT 451
Query: 309 KLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LL + + NH L A SGK+++LD LLK+L G RVL+
Sbjct: 452 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLI 511
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R + Y R+DGS EER AI ++ ++ + F
Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNS-----------EKF 560
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF+++TRAGG+G+NLV ADTVI ++ DWNPQ D QA+ RAHRIGQ V VTE+ +
Sbjct: 561 VFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAI 620
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 621 EEKVIERAAQKLRLDQLVI 639
>gi|432090998|gb|ELK24214.1| Chromodomain-helicase-DNA-binding protein 2 [Myotis davidii]
Length = 1889
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 197/498 (39%), Positives = 282/498 (56%), Gaps = 76/498 (15%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G + EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 542 GESLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 601
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ ++ Y+G+ R IR YE + Q++ L F+
Sbjct: 602 VVPLSTLTSWQREFEIWAPEINIVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 654
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 655 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 713
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 714 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 761
Query: 271 RRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELPKLLALSSR-------- 316
RR K+ + + LP E++ LQK+ Y IL + K LA +R
Sbjct: 762 RRVKKDVEKS----LPAKVERILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLN 816
Query: 317 -------TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
NH L +N +SGKL++LD LL +L G+RVL+F
Sbjct: 817 IVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIF 876
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QM + LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F
Sbjct: 877 SQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFC 925
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVE
Sbjct: 926 FLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVE 985
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RA++K+ L H V+
Sbjct: 986 EEIIERAKKKMVLDHLVI 1003
>gi|326918376|ref|XP_003205465.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Meleagris gallopavo]
Length = 1020
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 273/490 (55%), Gaps = 70/490 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +VL P
Sbjct: 145 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 204
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E ++ P L + +G+++QR R + + P +DV +T
Sbjct: 205 KSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDV------------LLPGEWDVCVT 252
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL
Sbjct: 253 SYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNL 311
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + F S F +++ K+ E+ L +L F+LRR K
Sbjct: 312 HELWALLNFLLPDVFNSSEDFDSWF----DTNNCLGDQKLVER---LHMVLRPFLLRRIK 364
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 365 ADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQL 420
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 421 RKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLD 480
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG +ER A+I Y+E G + FVFM+STRAG
Sbjct: 481 ILEDYCMWRNYEYCRLDGQTPHDERQASIN----------AYNEPGSS-KFVFMLSTRAG 529
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVEE I+ RAE
Sbjct: 530 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAE 589
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 590 MKLRLDSIVI 599
>gi|256272525|gb|EEU07504.1| Isw2p [Saccharomyces cerevisiae JAY291]
Length = 1121
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 283/499 (56%), Gaps = 69/499 (13%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ F + +L+ +QV+GL+WLI + ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 174 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GPFL++ P S D W E K+TP + VL G+++ R +I R + +
Sbjct: 234 GPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEAR---------- 283
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
FDVL+T+Y++V+ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+T
Sbjct: 284 --FDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIR-LFYSKNRLLIT 340
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P +FG F F+ ++S + + +Q L +L+
Sbjct: 341 GTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE---QNNSEQDQEIVVQQ---LHSVLN 394
Query: 267 AFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------P 308
F+LRR K + +LP + +T +Q + Y S+L K++
Sbjct: 395 PFLLRRVK---ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKT 451
Query: 309 KLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LL + + NH L A SGK+++LD LLK+L G RVL+
Sbjct: 452 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLI 511
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R + Y R+DGS EER AI ++ ++ + F
Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNS-----------EKF 560
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF+++TRAGG+G+NLV ADTVI ++ DWNPQ D QA+ RAHRIGQ V VTE+ +
Sbjct: 561 VFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAI 620
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 621 EEKVIERAAQKLRLDQLVI 639
>gi|118781335|ref|XP_311417.3| AGAP010700-PA [Anopheles gambiae str. PEST]
gi|116130122|gb|EAA07020.3| AGAP010700-PA [Anopheles gambiae str. PEST]
Length = 1026
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 200/543 (36%), Positives = 294/543 (54%), Gaps = 80/543 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + +PGP +V+ P
Sbjct: 127 GEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKNIRNNPGPHIVIVP 186
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S WV+E ++ P + + +G++E R R + + P +DV +T
Sbjct: 187 KSTLQNWVNEFGRWCPSIRAVCLIGDQETRTAFIRDV------------LMPGEWDVCIT 234
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNNL
Sbjct: 235 SYEMCIREKAVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLLTGTPLQNNL 293
Query: 215 SELWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
ELWAL++F +P +F + + F S F + +S +R L +L F+LRR
Sbjct: 294 HELWALLNFLLPDIFNSADDFDSWFDANQCMGDNSLIER---------LHAVLKPFLLRR 344
Query: 273 TKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKE--------------LPKLLAL 313
K E +LP ++ +Q++ Y IL K+ L +L
Sbjct: 345 LKS---EVEKRLLPKKEVKIFVGLSKMQREWYTKILMKDIDVVNGAGKVEKMRLQNILMQ 401
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A +GK+VVLD LL+KL RVL+F+QMT+ L
Sbjct: 402 LRKCTNHPYLFDGAEPGPPYTTDYHLLENAGKMVVLDKLLRKLQEQDSRVLIFSQMTRML 461
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+DF R Y Y RLDG E+R I ++ +++ + F+FM+STRA
Sbjct: 462 DILEDFCHWRGYQYCRLDGQTPHEDRSNMIADYNAENSTK-----------FIFMLSTRA 510
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE+TVEE I+ RA
Sbjct: 511 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERA 570
Query: 479 ERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII-FGL-HLFDPK--AINNEESDDLR 533
E KL+L V+ +VD + T + D++ +II FG H+F + I +E+ D +
Sbjct: 571 EVKLKLDKLVIQQGRLVDNKT---TQLNKDEMLNIIRFGANHVFQSRDSEITDEDIDAIL 627
Query: 534 LSG 536
G
Sbjct: 628 QKG 630
>gi|363733106|ref|XP_001234486.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Gallus
gallus]
Length = 1001
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 273/490 (55%), Gaps = 70/490 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +VL P
Sbjct: 126 GKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 185
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E ++ P L + +G+++QR R + + P +DV +T
Sbjct: 186 KSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDV------------LLPGEWDVCVT 233
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL
Sbjct: 234 SYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNL 292
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + F S F +++ K+ E+ L +L F+LRR K
Sbjct: 293 HELWALLNFLLPDVFNSSEDFDSWF----DTNNCLGDQKLVER---LHMVLRPFLLRRIK 345
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 346 ADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQL 401
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 402 RKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLD 461
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG +ER A+I Y+E G + FVFM+STRAG
Sbjct: 462 ILEDYCMWRNYEYCRLDGQTPHDERQASIN----------AYNEPGSS-KFVFMLSTRAG 510
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVEE I+ RAE
Sbjct: 511 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAE 570
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 571 MKLRLDSIVI 580
>gi|259149779|emb|CAY86583.1| Isw2p [Saccharomyces cerevisiae EC1118]
Length = 1121
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 283/499 (56%), Gaps = 69/499 (13%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ F + +L+ +QV+GL+WLI + ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 174 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GPFL++ P S D W E K+TP + VL G+++ R +I R + +
Sbjct: 234 GPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEAR---------- 283
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
FDVL+T+Y++V+ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+T
Sbjct: 284 --FDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIR-LFYSKNRLLIT 340
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P +FG F F+ ++S + + +Q L +L+
Sbjct: 341 GTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE---QNNSEQDQEIVVQQ---LHSVLN 394
Query: 267 AFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------P 308
F+LRR K + +LP + +T +Q + Y S+L K++
Sbjct: 395 PFLLRRVK---ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKT 451
Query: 309 KLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LL + + NH L A SGK+++LD LLK+L G RVL+
Sbjct: 452 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLI 511
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R + Y R+DGS EER AI ++ ++ + F
Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNS-----------EKF 560
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF+++TRAGG+G+NLV ADTVI ++ DWNPQ D QA+ RAHRIGQ V VTE+ +
Sbjct: 561 VFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAI 620
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 621 EEKVIERAAQKLRLDQLVI 639
>gi|6324879|ref|NP_014948.1| Isw2p [Saccharomyces cerevisiae S288c]
gi|74676479|sp|Q08773.1|ISW2_YEAST RecName: Full=ISWI chromatin-remodeling complex ATPase ISW2;
AltName: Full=Imitation switch protein 2
gi|1420671|emb|CAA99622.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285815176|tpg|DAA11069.1| TPA: Isw2p [Saccharomyces cerevisiae S288c]
gi|392296632|gb|EIW07734.1| Isw2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1120
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 283/499 (56%), Gaps = 69/499 (13%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ F + +L+ +QV+GL+WLI + ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 174 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GPFL++ P S D W E K+TP + VL G+++ R +I R + +
Sbjct: 234 GPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEAR---------- 283
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
FDVL+T+Y++V+ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+T
Sbjct: 284 --FDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIR-LFYSKNRLLIT 340
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P +FG F F+ ++S + + +Q L +L+
Sbjct: 341 GTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE---QNNSEQDQEIVIQQ---LHSVLN 394
Query: 267 AFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------P 308
F+LRR K + +LP + +T +Q + Y S+L K++
Sbjct: 395 PFLLRRVK---ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKT 451
Query: 309 KLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LL + + NH L A SGK+++LD LLK+L G RVL+
Sbjct: 452 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLI 511
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R + Y R+DGS EER AI ++ ++ + F
Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNS-----------EKF 560
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF+++TRAGG+G+NLV ADTVI ++ DWNPQ D QA+ RAHRIGQ V VTE+ +
Sbjct: 561 VFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAI 620
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 621 EEKVIERAAQKLRLDQLVI 639
>gi|349581455|dbj|GAA26613.1| K7_Isw2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1120
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 283/499 (56%), Gaps = 69/499 (13%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ F + +L+ +QV+GL+WLI + ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 174 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GPFL++ P S D W E K+TP + VL G+++ R +I R + +
Sbjct: 234 GPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEAR---------- 283
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
FDVL+T+Y++V+ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+T
Sbjct: 284 --FDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIR-LFYSKNRLLIT 340
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P +FG F F+ ++S + + +Q L +L+
Sbjct: 341 GTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE---QNNSEQDQEIVIQQ---LHSVLN 394
Query: 267 AFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------P 308
F+LRR K + +LP + +T +Q + Y S+L K++
Sbjct: 395 PFLLRRVK---ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKT 451
Query: 309 KLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LL + + NH L A SGK+++LD LLK+L G RVL+
Sbjct: 452 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLI 511
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R + Y R+DGS EER AI ++ ++ + F
Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNS-----------EKF 560
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF+++TRAGG+G+NLV ADTVI ++ DWNPQ D QA+ RAHRIGQ V VTE+ +
Sbjct: 561 VFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAI 620
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 621 EEKVIERAAQKLRLDQLVI 639
>gi|451848354|gb|EMD61660.1| hypothetical protein COCSADRAFT_96653 [Cochliobolus sativus ND90Pr]
Length = 1577
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 226/670 (33%), Positives = 347/670 (51%), Gaps = 107/670 (15%)
Query: 24 TPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQ 83
T D +FG +L+ Q++G+++L + G NV+L DEMGLGKT+Q +SF+++L+ +
Sbjct: 445 TQPDYIKFG---QLRSFQLQGVNFLAHNWCRGTNVILADEMGLGKTVQTVSFINWLRHDR 501
Query: 84 MSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSN 143
GP + + PLS W +TP + + Y G RE+ RNI +KE+ + +
Sbjct: 502 RQDGPMICVVPLSTMPAWADTFNNWTPDVNYVIYTG-REEARNI-------IKEKELLVD 553
Query: 144 VSP--LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
+P + F+VLLTTY+ VL D FL I W + +DEA RLKN S LY L F P
Sbjct: 554 NNPKKVKFNVLLTTYEYVLADWQFLQSIKWQFLAVDEAHRLKNRESQLYERL-TAFNAPC 612
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSL 261
RLL+TGTPIQN L EL ALM F MP + +DA ++ L
Sbjct: 613 RLLITGTPIQNTLGELAALMDFLMPGKISVDEHVDLSSEDA------------SQKLAEL 660
Query: 262 KGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASIL------------ 303
+ +M+RRTK+K+ LPP +E ++ +Q + Y +IL
Sbjct: 661 SSAIQPYMIRRTKEKVEND----LPPKSEKILRVELSDIQLEYYKNILTRNYEALNEGGV 716
Query: 304 --RKELPKLLALSSRTANH-------------------QSLQN--TASGKLVVLDLLLKK 340
++ L ++ + +NH ++L+ T+SGK+++LD LL K
Sbjct: 717 GHKQSLLNIVMELKKASNHALLFPNAESKLVKSGCSKEETLKALITSSGKMMLLDRLLGK 776
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
L GHRVL+F+QM LDIL D+L+LR Y+++RLDG++ A ER AI HF+
Sbjct: 777 LKADGHRVLIFSQMVHMLDILTDYLKLRNYAFQRLDGTVPAAERKIAIDHFN-------- 828
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
A G++ + F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V
Sbjct: 829 ---APGSEDYCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQQKPVS 885
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE------RTAVE---TDDLRS 511
LV++ T+EE I+ RA K L + V DR+ KE R A E DD+ +
Sbjct: 886 VYRLVSKDTIEEEILERARNKRMLEFITIQRGVTDRQQKELNDKMSRAAAEPNSADDINN 945
Query: 512 II--FGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAG-------RKFEV 562
I+ G +F+ ++ N ++ ++L ++S++E + EQ +G + FE
Sbjct: 946 ILKRRGQKMFE-QSGNQKKLEEL---DIDSVLENAEEHKTEQAAGLTSDGGEEFLKNFEY 1001
Query: 563 NPVAL-LEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRRSPE 621
V + LE D++ E + + D+ + +K E + A + R
Sbjct: 1002 TDVKIDLEWDDIIPKEELEAVKA--DIQQRKDEEETQKLLEENAPRKRKAASASAREQRA 1059
Query: 622 DKQRKLEAAR 631
K+R LEA++
Sbjct: 1060 AKKRALEASQ 1069
>gi|365762966|gb|EHN04498.1| Isw2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1121
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 283/499 (56%), Gaps = 69/499 (13%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ F + +L+ +QV+GL+WLI + ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 174 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GPFL++ P S D W E K+TP + VL G+++ R +I R + +
Sbjct: 234 GPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEAR---------- 283
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
FDVL+T+Y++V+ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+T
Sbjct: 284 --FDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIR-LFYSKNRLLIT 340
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P +FG F F+ ++S + + +Q L +L+
Sbjct: 341 GTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE---QNNSEQDQEIVVQQ---LHSVLN 394
Query: 267 AFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------P 308
F+LRR K + +LP + +T +Q + Y S+L K++
Sbjct: 395 PFLLRRVK---ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKT 451
Query: 309 KLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LL + + NH L A SGK+++LD LLK+L G RVL+
Sbjct: 452 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLI 511
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R + Y R+DGS EER AI ++ ++ + F
Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNS-----------EKF 560
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF+++TRAGG+G+NLV ADTVI ++ DWNPQ D QA+ RAHRIGQ V VTE+ +
Sbjct: 561 VFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAI 620
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 621 EEKVIERAAQKLRLDQLVI 639
>gi|207340908|gb|EDZ69113.1| YOR304Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1121
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 283/499 (56%), Gaps = 69/499 (13%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ F + +L+ +QV+GL+WLI + ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 174 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GPFL++ P S D W E K+TP + VL G+++ R +I R + +
Sbjct: 234 GPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEAR---------- 283
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
FDVL+T+Y++V+ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+T
Sbjct: 284 --FDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIR-LFYSKNRLLIT 340
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P +FG F F+ ++S + + +Q L +L+
Sbjct: 341 GTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE---QNNSEQDQEIVVQQ---LHSVLN 394
Query: 267 AFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------P 308
F+LRR K + +LP + +T +Q + Y S+L K++
Sbjct: 395 PFLLRRVK---ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKT 451
Query: 309 KLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LL + + NH L A SGK+++LD LLK+L G RVL+
Sbjct: 452 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLI 511
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R + Y R+DGS EER AI ++ ++ + F
Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNS-----------EKF 560
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF+++TRAGG+G+NLV ADTVI ++ DWNPQ D QA+ RAHRIGQ V VTE+ +
Sbjct: 561 VFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAI 620
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 621 EEKVIERAAQKLRLDQLVI 639
>gi|148678936|gb|EDL10883.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mus musculus]
Length = 993
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 111 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 170
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE K+ P L + +G++EQR R + + P
Sbjct: 171 GPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 218
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 219 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 277
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 278 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 330
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 331 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 386
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 387 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 446
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 447 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 495
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 496 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 555
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 556 ERIVERAEMKLRLDSIVI 573
>gi|326924536|ref|XP_003208483.1| PREDICTED: probable global transcription activator SNF2L1-like
[Meleagris gallopavo]
Length = 1043
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +QV GL+W+I Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 168 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 227
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L + +G+++ R R + + P +DV +T+Y
Sbjct: 228 TLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDV------------MMPGEWDVCVTSY 275
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 276 EMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNLHE 334
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 335 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 385
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 386 AEVEKS----LPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQL 441
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK++VLD LL KL G RVLLF+QMT+ LD
Sbjct: 442 RKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLD 501
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 502 ILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN-----------APNSSKFIFMLSTRAG 550
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 551 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 610
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 611 IKLRLDSIVI 620
>gi|40254124|ref|NP_444354.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Mus musculus]
gi|55977469|sp|Q91ZW3.1|SMCA5_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5; AltName:
Full=Sucrose nonfermenting protein 2 homolog;
Short=mSnf2h
gi|16551316|gb|AAL25793.1|AF375046_1 ATP-dependent chromatin remodeling protein SNF2H [Mus musculus]
gi|31419851|gb|AAH53069.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mus musculus]
Length = 1051
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 169 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 228
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE K+ P L + +G++EQR R + + P
Sbjct: 229 GPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 276
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 277 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 335
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 336 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 388
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 389 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 444
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 445 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 504
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 505 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 553
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 614 ERIVERAEMKLRLDSIVI 631
>gi|156383405|ref|XP_001632824.1| predicted protein [Nematostella vectensis]
gi|156219886|gb|EDO40761.1| predicted protein [Nematostella vectensis]
Length = 1022
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/490 (39%), Positives = 273/490 (55%), Gaps = 70/490 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+CP
Sbjct: 142 GEMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKNFRNVPGPHMVICP 201
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRN-IRRTMYEHVKEQSQMSNVSPLPFDVLL 153
S W++E ++ P + + +G +EQR IR TM P +DV +
Sbjct: 202 KSTLANWMAEFERWCPSIRAVCLIGNQEQRTAFIRDTML-------------PGEWDVCV 248
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++V+ ++ + W Y +IDEA R+KN S L ++RE RLL+TGTP+QNN
Sbjct: 249 TSYEMVIREKAVFKKFAWRYIVIDEAHRIKNEKSKLSEIVRE-LRSANRLLLTGTPLQNN 307
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + + F + F +S++ + ++ E+ S +L F+LRR
Sbjct: 308 LHELWALLNFLLPDVFSSSDDFDAWF----NSNNLVEEKQLVERLHS---VLRPFLLRRL 360
Query: 274 KQKLVECGHLMLPP-----LTEITVLQKKVYASILRKE--------------LPKLLALS 314
K + + +LP T +T +Q+ Y IL K+ L +L
Sbjct: 361 KSDVEK---RLLPKKETKVYTGLTKMQRSWYTKILMKDIDVVNGAGKTDKMRLLNILMQL 417
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+ VLD LL +L G RVL+F+QMT+ LD
Sbjct: 418 RKCCNHPYLFDGAEPGPPYTTDVHLIENSGKMRVLDKLLARLKQEGSRVLIFSQMTRLLD 477
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R+Y Y RLDG EER A I F++ G+ F+FM+STRAG
Sbjct: 478 ILEDYCLWRQYDYCRLDGQTPHEERQAYINSFNMP-----------GSTKFIFMLSTRAG 526
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V ++E TVEE I+ RAE
Sbjct: 527 GLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQKKQVKVFRFISESTVEERIIERAE 586
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 587 MKLRLDAVVI 596
>gi|348582546|ref|XP_003477037.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Cavia
porcellus]
Length = 1051
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 277/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 169 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 228
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE+ ++ P L + +G++EQR R + + P
Sbjct: 229 GPHMVLVPKSTLHNWMSELKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 276
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 277 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 335
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 336 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 388
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 389 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 444
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 445 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 504
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 505 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 553
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 614 ERIVERAEMKLRLDSIVI 631
>gi|190407604|gb|EDV10871.1| ATPase component of a two subunit chromatin remodeling complex
[Saccharomyces cerevisiae RM11-1a]
Length = 1121
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 283/499 (56%), Gaps = 69/499 (13%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ F + +L+ +QV+GL+WLI + ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 174 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GPFL++ P S D W E K+TP + VL G+++ R +I R + +
Sbjct: 234 GPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEAR---------- 283
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
FDVL+T+Y++V+ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+T
Sbjct: 284 --FDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIR-LFYSKNRLLIT 340
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P +FG F F+ ++S + + +Q L +L+
Sbjct: 341 GTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE---QNNSEQDQEIVVQQ---LHSVLN 394
Query: 267 AFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------P 308
F+LRR K + +LP + +T +Q + Y S+L K++
Sbjct: 395 PFLLRRVK---ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKT 451
Query: 309 KLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LL + + NH L A SGK+++LD LLK+L G RVL+
Sbjct: 452 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLI 511
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R + Y R+DGS EER AI ++ ++ + F
Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNS-----------EKF 560
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF+++TRAGG+G+NLV ADTVI ++ DWNPQ D QA+ RAHRIGQ V VTE+ +
Sbjct: 561 VFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAI 620
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 621 EEKVIERAAQKLRLDQLVI 639
>gi|348579584|ref|XP_003475559.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Cavia
porcellus]
Length = 1674
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/495 (39%), Positives = 285/495 (57%), Gaps = 69/495 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 460 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 519
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 520 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 572
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 573 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 631
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 632 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 679
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 680 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 738
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 739 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 798
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 799 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 847
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSI-NLVTEHTVEEVI 474
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ + +++I LVT+ TVEE I
Sbjct: 848 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQRSRLVNIYRLVTKGTVEEEI 907
Query: 475 MRRAERKLRLSHNVV 489
+ RA++K+ L H V+
Sbjct: 908 IERAKKKMVLDHLVI 922
>gi|451999009|gb|EMD91472.1| hypothetical protein COCHEDRAFT_1194283 [Cochliobolus heterostrophus
C5]
Length = 1577
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 226/670 (33%), Positives = 347/670 (51%), Gaps = 107/670 (15%)
Query: 24 TPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQ 83
T D +FG +L+ Q++G+++L + G NV+L DEMGLGKT+Q +SF+++L+ +
Sbjct: 445 TQPDYIKFG---QLRSFQLQGVNFLAHNWCRGTNVILADEMGLGKTVQTVSFINWLRHDR 501
Query: 84 MSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSN 143
GP + + PLS W +TP + + Y G RE+ RNI +KE+ + +
Sbjct: 502 RQDGPMICVVPLSTMPAWADTFNNWTPDVNYVIYTG-REEARNI-------IKEKELLVD 553
Query: 144 VSP--LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
+P + F+VLLTTY+ VL D FL I W + +DEA RLKN S LY L F P
Sbjct: 554 NNPKKVKFNVLLTTYEYVLADWQFLQSIKWQFLAVDEAHRLKNRESQLYERL-TAFNAPC 612
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSL 261
RLL+TGTPIQN L EL ALM F MP + +DA ++ L
Sbjct: 613 RLLITGTPIQNTLGELAALMDFLMPGKISVDEHVDLSSEDA------------SQKLAEL 660
Query: 262 KGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASIL------------ 303
+ +M+RRTK+K+ LPP +E ++ +Q + Y +IL
Sbjct: 661 SSAIQPYMIRRTKEKVEND----LPPKSEKILRVELSDIQLEYYKNILTRNYEALNEGGV 716
Query: 304 --RKELPKLLALSSRTANH-------------------QSLQN--TASGKLVVLDLLLKK 340
++ L ++ + +NH ++L+ T+SGK+++LD LL K
Sbjct: 717 GHKQSLLNIVMELKKASNHALLFPNAESKLVKSGCSKEETLKALITSSGKMMLLDRLLGK 776
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
L GHRVL+F+QM LDIL D+L+LR Y+++RLDG++ A ER AI HF+
Sbjct: 777 LKADGHRVLIFSQMVHMLDILTDYLKLRNYAFQRLDGTVPAAERKIAIDHFN-------- 828
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
A G++ + F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V
Sbjct: 829 ---APGSEDYCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQQKPVS 885
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE------RTAVE---TDDLRS 511
LV++ T+EE I+ RA K L + V DR+ KE R A E DD+ +
Sbjct: 886 VYRLVSKDTIEEEILERARNKRMLEFITIQRGVTDRQQKELNDKMSRAAAEPNSADDINN 945
Query: 512 II--FGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAG-------RKFEV 562
I+ G +F+ ++ N ++ ++L ++S++E + EQ +G + FE
Sbjct: 946 ILKRRGQKMFE-QSGNQKKLEEL---DIDSVLENAEEHKTEQAAGLTSDGGEEFLKNFEY 1001
Query: 563 NPVAL-LEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRRSPE 621
V + LE D++ E + + D+ + +K E + A + R
Sbjct: 1002 TDVKIDLEWDDIIPKEELEAVKA--DIQQRKDEEETQKLLEENAPRKRKAASASAREQRA 1059
Query: 622 DKQRKLEAAR 631
K+R LEA++
Sbjct: 1060 AKKRALEASQ 1069
>gi|401408363|ref|XP_003883630.1| hypothetical protein NCLIV_033850 [Neospora caninum Liverpool]
gi|325118047|emb|CBZ53598.1| hypothetical protein NCLIV_033850 [Neospora caninum Liverpool]
Length = 1613
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 199/519 (38%), Positives = 289/519 (55%), Gaps = 68/519 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ ++K +Q+EGL+WL + + L +N +L DEMGLGKTLQ IS L++L+F + PGP LV+
Sbjct: 212 IEGKMKHYQIEGLNWLYQLHCLDINGILADEMGLGKTLQTISILAFLQFEKNIPGPHLVI 271
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP S D W +E+ K+ P+ R G +E+R+ + T+ + P FD+
Sbjct: 272 CPRSTLDNWFNEVKKWCPRFRPARLHGTKEERQELYDTV------------LDPGHFDIC 319
Query: 153 LTTYDVVLMDQGFL-SQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
+TTY++V+ D L S+ W Y I+DEA R+KN SVL V+R RRLL+TGTP+Q
Sbjct: 320 ITTYEMVIKDYHRLASRFQWNYLIMDEAHRIKNEKSVLSEVVRRFRPR-RRLLITGTPLQ 378
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NNL ELWAL++F MP +F F + F D ++ ++ ++ T+L IL FMLR
Sbjct: 379 NNLRELWALLNFIMPQLFDATLDFAALF-DFSRLNTEQQQHQV---ITTLHRILRPFMLR 434
Query: 272 RTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS---------- 315
R K + LPP EI + LQKK+YA IL K + L A+S
Sbjct: 435 RLKSDVAR----DLPPKREIYIFVGMSKLQKKLYADILSKNVEVLNAMSGSKTQMLNILM 490
Query: 316 ---RTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A+GK+ +LD LL +L G RVLLF+QMT+
Sbjct: 491 QLRKCCNHPYLFDGVEPGPPYVEGEHMVEAAGKMALLDKLLPRLKAEGSRVLLFSQMTRL 550
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+ D+ R + Y R+DG ER I F+ + G+ F+F++STR
Sbjct: 551 LDIVDDYCRWRGFDYCRIDGGTPGTERQERIDEFNAE-----------GSSKFLFLLSTR 599
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI ++ D+NPQ+D QA+ RAHRIGQ V+ VT TVE I+ R
Sbjct: 600 AGGLGINLATADVVILFDSDFNPQMDLQAMDRAHRIGQKKRVVVYRFVTGDTVEAKIVER 659
Query: 478 AERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FG 515
A +KL+L V+ + + + + T++L +I+ FG
Sbjct: 660 AAKKLKLDSLVIQKGRLSQSNQAQKGPSTNELHAILQFG 698
>gi|221508955|gb|EEE34524.1| chromatin remodelling complex protein SNF2L, putative [Toxoplasma
gondii VEG]
Length = 1551
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 201/519 (38%), Positives = 290/519 (55%), Gaps = 68/519 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ ++K +Q+EGL+WL + + L +N +L DEMGLGKTLQ IS L++L+F + PGP LV+
Sbjct: 195 IEGKMKHYQIEGLNWLYQLHCLDINGILADEMGLGKTLQTISILAFLQFEKNIPGPHLVI 254
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP S D W +E+ K+ P+ R G +E+R+ +YE V + P FD+
Sbjct: 255 CPRSTLDNWFNEVKKWCPRFRPARLHGTKEERQE----LYESV--------LDPGLFDIC 302
Query: 153 LTTYDVVLMDQGFL-SQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
+TTY++V+ D L S+ W Y I+DEA R+KN SVL V+R RRLL+TGTP+Q
Sbjct: 303 ITTYEMVIKDYHRLASRFQWNYLIMDEAHRIKNEKSVLSEVVRRFRPR-RRLLITGTPLQ 361
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NNL ELWAL++F MP +F F + F D ++ ++ ++ T+L IL FMLR
Sbjct: 362 NNLRELWALLNFIMPQLFDVTLDFAALF-DFSRLNTEQQQHQV---ITTLHRILRPFMLR 417
Query: 272 RTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS---------- 315
R K + LPP EI + LQKK+YA IL K + L A+S
Sbjct: 418 RLKSDVAR----DLPPKREIYIFVGMSKLQKKLYADILSKNVEVLNAMSGSKTQMLNILM 473
Query: 316 ---RTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A+GK+ +LD LL +L G RVLLF+QMT+
Sbjct: 474 QLRKCCNHPYLFDGVEPGPPYVEGEHMVEAAGKMALLDKLLPRLKAEGSRVLLFSQMTRL 533
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+ D+ R + Y R+DG ER I F+ + G+ F+F++STR
Sbjct: 534 LDIVDDYCRWRGFDYCRIDGGTPGTERQERIDEFNAE-----------GSKKFLFLLSTR 582
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI ++ D+NPQ+D QA+ RAHRIGQ V+ VT TVE I+ R
Sbjct: 583 AGGLGINLATADIVILFDSDFNPQMDLQAMDRAHRIGQKKRVVVYRFVTGDTVEAKIVER 642
Query: 478 AERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FG 515
A +KL+L V+ + + + + T++L +I+ FG
Sbjct: 643 AAKKLKLDSLVIQKGRLSQSNQAQKGPSTNELHAILQFG 681
>gi|237833381|ref|XP_002365988.1| chromatin remodeling complex protein SNF2L, putative [Toxoplasma
gondii ME49]
gi|211963652|gb|EEA98847.1| chromatin remodeling complex protein SNF2L, putative [Toxoplasma
gondii ME49]
Length = 1556
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 201/519 (38%), Positives = 290/519 (55%), Gaps = 68/519 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ ++K +Q+EGL+WL + + L +N +L DEMGLGKTLQ IS L++L+F + PGP LV+
Sbjct: 195 IEGKMKHYQIEGLNWLYQLHCLDINGILADEMGLGKTLQTISILAFLQFEKNIPGPHLVI 254
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP S D W +E+ K+ P+ R G +E+R+ +YE V + P FD+
Sbjct: 255 CPRSTLDNWFNEVKKWCPRFRPARLHGTKEERQE----LYESV--------LDPGLFDIC 302
Query: 153 LTTYDVVLMDQGFL-SQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
+TTY++V+ D L S+ W Y I+DEA R+KN SVL V+R RRLL+TGTP+Q
Sbjct: 303 ITTYEMVIKDYHRLASRFQWNYLIMDEAHRIKNEKSVLSEVVRRFRPR-RRLLITGTPLQ 361
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NNL ELWAL++F MP +F F + F D ++ ++ ++ T+L IL FMLR
Sbjct: 362 NNLRELWALLNFIMPQLFDVTLDFAALF-DFSRLNTEQQQHQV---ITTLHRILRPFMLR 417
Query: 272 RTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS---------- 315
R K + LPP EI + LQKK+YA IL K + L A+S
Sbjct: 418 RLKSDVAR----DLPPKREIYIFVGMSKLQKKLYADILSKNVEVLNAMSGSKTQMLNILM 473
Query: 316 ---RTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A+GK+ +LD LL +L G RVLLF+QMT+
Sbjct: 474 QLRKCCNHPYLFDGVEPGPPYVEGEHMVEAAGKMALLDKLLPRLKAEGSRVLLFSQMTRL 533
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+ D+ R + Y R+DG ER I F+ + G+ F+F++STR
Sbjct: 534 LDIVDDYCRWRGFDYCRIDGGTPGTERQERIDEFNAE-----------GSKKFLFLLSTR 582
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI ++ D+NPQ+D QA+ RAHRIGQ V+ VT TVE I+ R
Sbjct: 583 AGGLGINLATADIVILFDSDFNPQMDLQAMDRAHRIGQKKRVVVYRFVTGDTVEAKIVER 642
Query: 478 AERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FG 515
A +KL+L V+ + + + + T++L +I+ FG
Sbjct: 643 AAKKLKLDSLVIQKGRLSQSNQAQKGPSTNELHAILQFG 681
>gi|296478735|tpg|DAA20850.1| TPA: SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin a5 [Bos taurus]
gi|440889489|gb|ELR44647.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Bos grunniens mutus]
Length = 1052
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|221488451|gb|EEE26665.1| chromatin remodelling complex protein SNF2L, putative [Toxoplasma
gondii GT1]
Length = 1556
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 201/519 (38%), Positives = 290/519 (55%), Gaps = 68/519 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ ++K +Q+EGL+WL + + L +N +L DEMGLGKTLQ IS L++L+F + PGP LV+
Sbjct: 195 IEGKMKHYQIEGLNWLYQLHCLDINGILADEMGLGKTLQTISILAFLQFEKNIPGPHLVI 254
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP S D W +E+ K+ P+ R G +E+R+ +YE V + P FD+
Sbjct: 255 CPRSTLDNWFNEVKKWCPRFRPARLHGTKEERQE----LYESV--------LDPGLFDIC 302
Query: 153 LTTYDVVLMDQGFL-SQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
+TTY++V+ D L S+ W Y I+DEA R+KN SVL V+R RRLL+TGTP+Q
Sbjct: 303 ITTYEMVIKDYHRLASRFQWNYLIMDEAHRIKNEKSVLSEVVRRFRPR-RRLLITGTPLQ 361
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NNL ELWAL++F MP +F F + F D ++ ++ ++ T+L IL FMLR
Sbjct: 362 NNLRELWALLNFIMPQLFDVTLDFAALF-DFSRLNTEQQQHQV---ITTLHRILRPFMLR 417
Query: 272 RTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS---------- 315
R K + LPP EI + LQKK+YA IL K + L A+S
Sbjct: 418 RLKSDVAR----DLPPKREIYIFVGMSKLQKKLYADILSKNVEVLNAMSGSKTQMLNILM 473
Query: 316 ---RTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A+GK+ +LD LL +L G RVLLF+QMT+
Sbjct: 474 QLRKCCNHPYLFDGVEPGPPYVEGEHMVEAAGKMALLDKLLPRLKAEGSRVLLFSQMTRL 533
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+ D+ R + Y R+DG ER I F+ + G+ F+F++STR
Sbjct: 534 LDIVDDYCRWRGFDYCRIDGGTPGTERQERIDEFNAE-----------GSKKFLFLLSTR 582
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI ++ D+NPQ+D QA+ RAHRIGQ V+ VT TVE I+ R
Sbjct: 583 AGGLGINLATADIVILFDSDFNPQMDLQAMDRAHRIGQKKRVVVYRFVTGDTVEAKIVER 642
Query: 478 AERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FG 515
A +KL+L V+ + + + + T++L +I+ FG
Sbjct: 643 AAKKLKLDSLVIQKGRLSQSNQAQKGPSTNELHAILQFG 681
>gi|125995400|ref|NP_001075098.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Danio rerio]
gi|124481629|gb|AAI33098.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Danio rerio]
Length = 1028
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/499 (39%), Positives = 277/499 (55%), Gaps = 72/499 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + T +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 146 DSPSYVKTGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 205
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRN-IRRTMYEHVKEQSQMSNVS 145
GP +VL P S W++E ++ P L+ + +G+RE+R IR T+
Sbjct: 206 GPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIGDREERTAFIRDTLL------------- 252
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
P +DV +T+Y+++++++ + W Y +IDEA R+KN S L ++RE F RLL+
Sbjct: 253 PGEWDVCVTSYEMLIIERAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLL 311
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGIL 265
TGTP+QNNL ELWAL++F +P VF + F + F +++ K+ E+ L +L
Sbjct: 312 TGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWF----DTNNCLGDTKLVER---LHTVL 364
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKL--------- 310
F+LRR K + + L P EI + +Q++ Y IL K++ L
Sbjct: 365 RPFLLRRIKADVEKS----LLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKM 420
Query: 311 -----LALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
L + NH L + A SGK+VVLD LL KL G RVL+
Sbjct: 421 RLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLI 480
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LDIL+D+ R Y Y RLDG EER +I F+ ++ F
Sbjct: 481 FSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNS-----------SKF 529
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TV
Sbjct: 530 LFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTV 589
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE I+ RAE KLRL V+
Sbjct: 590 EERIVERAEMKLRLDSIVI 608
>gi|70993276|ref|XP_751485.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293]
gi|66849119|gb|EAL89447.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293]
gi|159125581|gb|EDP50698.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163]
Length = 1111
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 198/544 (36%), Positives = 292/544 (53%), Gaps = 81/544 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ E++ +Q+ GL+WL+ + G++ +L DEMGLGKTLQ ISFL YL+ GP LV
Sbjct: 184 IQGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYLRHVCGITGPHLVA 243
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E K+TP + VL G++E+R + + E + ++ FDV
Sbjct: 244 VPKSTLDNWKREFHKWTPDVNVLVLQGDKEERHKL---INERLLDED---------FDVC 291
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++VL ++ L + W Y IIDEA R+KN S L ++R F RLL+TGTP+QN
Sbjct: 292 VTSYEMVLREKAHLKKFAWEYIIIDEAHRIKNEESSLAQIIR-VFNSRNRLLITGTPLQN 350
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VFG F D SS + + +Q L +L F+LRR
Sbjct: 351 NLHELWALLNFLLPDVFGDSEAF-----DQWFSSQDADQDTVVQQ---LHRVLRPFLLRR 402
Query: 273 TKQKLVECGHLMLP--------PLTEITVLQKKVYASILRKELPKLLALSS--------- 315
K + + +LP P++E+ V K Y IL K++ + +
Sbjct: 403 VKSDVEKS---LLPKKEVNLYVPMSEMQV---KWYQKILEKDIDAVNGAAGKRESKTRLL 456
Query: 316 -------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L A SGK+V+LD LL ++ G RVL+F+Q
Sbjct: 457 NIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNSGKMVILDKLLARMQKQGSRVLIFSQ 516
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R Y Y R+DG+ E+R AAI ++ G+D F+F+
Sbjct: 517 MSRVLDILEDYCVFRDYKYCRIDGTTAHEDRIAAIDEYN-----------KPGSDKFIFL 565
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VTE+ +EE
Sbjct: 566 LTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVFRFVTENAIEEK 625
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII--FGLHLFDPKAINNEESDD 531
++ RA +KLRL V+ ++VK A D+L +I ++F+ K S+D
Sbjct: 626 VLERAAQKLRLDQLVIQQGRAQQQVK--NAASKDELLGMIQHGAANVFNTKGATGALSND 683
Query: 532 LRLS 535
+LS
Sbjct: 684 KQLS 687
>gi|47217344|emb|CAG11049.1| unnamed protein product [Tetraodon nigroviridis]
Length = 985
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + T +++ +QV GL+WLI Y G+N +L DEMGLGKTLQ I+ L Y+K + P
Sbjct: 102 DSPSYVKTGKMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYRNIP 161
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W++E ++ P L + +G+R++R + R + + P
Sbjct: 162 GPHMVLVPKSTLYNWMNEFKRWVPSLRAVCLIGDRDERTALIRDV------------LLP 209
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y+++++++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 210 GEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 268
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P VF + F S F +++ K+ E+ L +L
Sbjct: 269 GTPLQNNLHELWALLNFLLPDVFNSSEDFDSWF----DTNNCLGDQKLVER---LHTVLR 321
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + L P EI + +Q++ Y IL K+
Sbjct: 322 PFLLRRIKADVEKT----LLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMR 377
Query: 307 LPKLLALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + A SGK+VVLD LL KL G RVL+F
Sbjct: 378 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKLKEQGSRVLIF 437
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG EER +I F+ ++ F+
Sbjct: 438 SQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNS-----------SKFI 486
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +TE+TVE
Sbjct: 487 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRYITENTVE 546
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 547 ERIVERAEMKLRLDSIVI 564
>gi|367010340|ref|XP_003679671.1| hypothetical protein TDEL_0B03310 [Torulaspora delbrueckii]
gi|359747329|emb|CCE90460.1| hypothetical protein TDEL_0B03310 [Torulaspora delbrueckii]
Length = 1049
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/519 (37%), Positives = 289/519 (55%), Gaps = 69/519 (13%)
Query: 7 LQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGL 66
L +I D+D D ++ + +L+ +Q++GL+WLI + ++ +L DEMGL
Sbjct: 101 LMADEEIEGDDDYGDSNFVTESPSYIQHGKLRDYQIQGLNWLIALHENKLSGILADEMGL 160
Query: 67 GKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRN 126
GKTLQ ISFL +L++ + GPFLV+ P S D W E AK+TP++ + G++ R+
Sbjct: 161 GKTLQTISFLGHLRYRKGIEGPFLVIVPKSTLDNWRREFAKWTPEVNAIVLHGDKNARQE 220
Query: 127 IRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPS 186
I + + K FDVL+T+Y++V+ ++G L ++ W Y IIDEA R+KN +
Sbjct: 221 ILQDVILEAK------------FDVLITSYEMVIKEKGTLKRLAWQYIIIDEAHRIKNEA 268
Query: 187 SVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSS 246
S L ++R F RLL+TGTP+QNNL ELWAL++F +P VFG F F+ ++
Sbjct: 269 STLSQIIR-LFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEIFDEWFE---QNN 324
Query: 247 SAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYAS 301
S + + +Q L +L+ F+LRR K + +LP + +T +Q Y S
Sbjct: 325 SEEDQEVVVQQ---LHTVLNPFLLRRIK---ADVEKSLLPKIETNLYVGMTDMQIHWYKS 378
Query: 302 ILRKEL-------------PKLLALS---SRTANHQSLQNTA---------------SGK 330
+L K++ +LL + + NH L A +GK
Sbjct: 379 LLEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNAGK 438
Query: 331 LVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRH 390
++VLD LL +L G RVL+F+QM++ LDIL+D+ R+Y Y R+DGS EER AI
Sbjct: 439 MIVLDKLLHRLKEKGSRVLIFSQMSRLLDILEDYCFFREYEYCRIDGSTAHEERIEAIDE 498
Query: 391 FSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA 450
F+ + + FVF+++TRAGG+G+NLV ADTV+ Y+ DWNPQ D QA+ RA
Sbjct: 499 FNKPDS-----------EKFVFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRA 547
Query: 451 HRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
HRIGQ V VTE+ +EE ++ RA +KLRL V+
Sbjct: 548 HRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVI 586
>gi|195398205|ref|XP_002057713.1| GJ18281 [Drosophila virilis]
gi|194141367|gb|EDW57786.1| GJ18281 [Drosophila virilis]
Length = 1924
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 205/540 (37%), Positives = 295/540 (54%), Gaps = 79/540 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPL 95
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PL
Sbjct: 553 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLY-GPFLCVVPL 611
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ + R I++ + Q L F+ +LTT
Sbjct: 612 STMTAWQREFDLWAPDMNVVTYLGDVKSRELIQQYEW-------QFEGSKRLKFNCILTT 664
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 665 YEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLK 723
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP+ F T + F + +A +G +T L L ++LRR K+
Sbjct: 724 ELWALLHFIMPAKFDTWDNF------ELQHGNAEDKG-----YTRLHQQLEPYILRRVKK 772
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQK+ Y IL K L + N
Sbjct: 773 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCN 832
Query: 320 HQSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
H +L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+
Sbjct: 833 HAALIRPSEFELFGLQQDEALQMLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDV 892
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L D+L+ R +S++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG
Sbjct: 893 LADYLQKRHFSFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGG 941
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++
Sbjct: 942 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 1001
Query: 481 KLRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ ++ DDL +I+ FG LF + + EE
Sbjct: 1002 KMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFKDEQEHEEE 1061
>gi|149698191|ref|XP_001502076.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Equus
caballus]
Length = 1052
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|395834498|ref|XP_003790238.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Otolemur
garnettii]
Length = 1052
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|301777862|ref|XP_002924349.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Ailuropoda melanoleuca]
Length = 1052
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|344284165|ref|XP_003413840.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Loxodonta
africana]
Length = 1902
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 571 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 630
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 631 VVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LRFNA 683
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 684 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 742
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 743 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 790
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 791 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 849
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 850 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 909
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 910 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 958
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 959 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 1018
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 1019 ERAKKKMVLDHLVI 1032
>gi|324500144|gb|ADY40077.1| Chromodomain-helicase-DNA-binding protein 1 [Ascaris suum]
Length = 1875
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 289/521 (55%), Gaps = 77/521 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+EG++W++ + + +L DEMGLGKT+Q+I+FLS L GPFLV+ PL
Sbjct: 501 ELRDYQLEGVNWMLHAWSKENSCILADEMGLGKTIQSIAFLSVLFHQYDLYGPFLVVVPL 560
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLLT 154
S W E + L V+ Y+G+ R IR+ M+ + L +VLLT
Sbjct: 561 STMAAWQREFENWACDLNVVTYMGDVTSRDYIRQFEMF--------VQGTKRLKVNVLLT 612
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+++L D+ FL W +DEA RLKN S+LY L + F RLL+TGTP+QN+L
Sbjct: 613 TYEILLKDKAFLGAFEWAVLAVDEAHRLKNDESLLYRSLFD-FSTNHRLLITGTPLQNSL 671
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL+HF MP+ F + + F D H + A SL L F+LRR K
Sbjct: 672 KELWALLHFIMPNKFESWDDFEEDHHDPDHRAIA-----------SLHRKLEPFLLRRVK 720
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRK---ELPK-----------LLALS 314
+ + + LP E +T+ QK+ Y IL K EL K L+
Sbjct: 721 KDVEKS----LPAKVEQILRVDMTIQQKQYYKWILTKNYKELSKGVKGSINGFVNLIMEL 776
Query: 315 SRTANHQSL--------QNT---------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH SL +N +SGKL++LD LL +L+ +GHRVL+F+QM
Sbjct: 777 KKCCNHASLVRAYDHYEENAQARLQQLMKSSGKLILLDKLLCRLHETGHRVLIFSQMVMM 836
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+Q++L+LR++ +RLDGS+RA+ R AA+ HF+ A G+ F F++STR
Sbjct: 837 LDIVQEYLQLRRFPSQRLDGSMRADLRKAALDHFN-----------AEGSTDFCFLLSTR 885
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V LVT+ +VEE I+ R
Sbjct: 886 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQKKQVNIYRLVTKASVEEEIVER 945
Query: 478 AERKLRLSHNVVGD-DVVDREVKERTAVETDDLRSIIFGLH 517
A+RKL L H V+ D R V +++V S+ F H
Sbjct: 946 AKRKLVLDHLVIQRMDTTGRTVLSKSSVTNG---SVPFDKH 983
>gi|410956805|ref|XP_003985028.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Felis
catus]
Length = 1052
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|403272423|ref|XP_003928064.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Saimiri
boliviensis boliviensis]
Length = 1052
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|351713893|gb|EHB16812.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5, partial [Heterocephalus
glaber]
Length = 993
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 111 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 170
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 171 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 218
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 219 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 277
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 278 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 330
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 331 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 386
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 387 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 446
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 447 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 495
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 496 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 555
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 556 ERIVERAEMKLRLDSIVI 573
>gi|71014727|ref|XP_758754.1| hypothetical protein UM02607.1 [Ustilago maydis 521]
gi|46098544|gb|EAK83777.1| hypothetical protein UM02607.1 [Ustilago maydis 521]
Length = 1108
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 188/492 (38%), Positives = 275/492 (55%), Gaps = 72/492 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +QV+GL+W+I Y G+N +L DEMGLGKTLQ ISFL YL+ + +PG LV+ P
Sbjct: 221 GKMRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQTISFLGYLRDFRETPGFHLVVVP 280
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S D W E ++ P V+ G +E+R + + +H+ P FDVL+T
Sbjct: 281 KSTLDNWYREFHRWVPGFNVVTLKGSKEEREKV---IQDHL---------LPQDFDVLIT 328
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++ L ++ L ++ W Y +IDEA R+KN S+L ++R F RLL+TGTP+QNNL
Sbjct: 329 TYEMCLREKSALKKLSWEYIVIDEAHRIKNVDSMLSQIVR-AFNSRSRLLITGTPLQNNL 387
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELW+L++F +P VF F S FK + ++ +Q L +L F+LRR K
Sbjct: 388 MELWSLLNFLLPDVFSNSEDFESWFK----GKGDENQDQVVQQ---LHKVLRPFLLRRVK 440
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLALS- 314
+ + L P EI + +Q+K Y SIL K++ +LL +
Sbjct: 441 ADVEKS----LLPKKEINIFVGLTEMQRKWYKSILEKDIDAVNGGVGKKEGKTRLLNIVM 496
Query: 315 --SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A SGK+V+LD LL K+ G RVL+F+QM++
Sbjct: 497 QLRKCCNHPYLFDGAEPGPPFTTDEHLVDNSGKMVILDRLLHKMKQKGSRVLIFSQMSRM 556
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D+ R+Y Y R+DG ++R AAI ++ G++ FVF+++TR
Sbjct: 557 LDILEDYCLFREYKYCRIDGGTAHDDRIAAIDEYN-----------KPGSEKFVFLLTTR 605
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD V+ ++ DWNPQ D QA+ RAHRIGQ V VTEH +EE I+ R
Sbjct: 606 AGGLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTEHAIEERILDR 665
Query: 478 AERKLRLSHNVV 489
A +KLRL V+
Sbjct: 666 AAQKLRLDQLVI 677
>gi|57096815|ref|XP_532676.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 isoform 1
[Canis lupus familiaris]
Length = 1052
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|157817975|ref|NP_001100889.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Rattus norvegicus]
gi|149037939|gb|EDL92299.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 995
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 113 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 172
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 173 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 220
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 221 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 279
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 280 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 332
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 333 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 388
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 389 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 448
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 449 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 497
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 498 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 557
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 558 ERIVERAEMKLRLDSIVI 575
>gi|344291654|ref|XP_003417549.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Loxodonta
africana]
Length = 1052
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|335293809|ref|XP_003129222.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Sus scrofa]
Length = 1052
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|426345573|ref|XP_004040481.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Gorilla
gorilla gorilla]
Length = 1000
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 118 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 177
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 178 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 225
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 226 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 284
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 285 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 337
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 338 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 393
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 394 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 453
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 454 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 502
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 503 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 562
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 563 ERIVERAEMKLRLDSIVI 580
>gi|291401180|ref|XP_002716976.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a5-like [Oryctolagus cuniculus]
Length = 1051
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 169 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 228
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 229 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 276
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 277 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 335
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 336 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 388
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 389 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 444
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 445 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 504
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 505 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 553
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 614 ERIVERAEMKLRLDSIVI 631
>gi|355720696|gb|AES07016.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Mustela putorius furo]
Length = 1030
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|410294848|gb|JAA26024.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Pan troglodytes]
Length = 1052
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|397500075|ref|XP_003820752.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Pan
paniscus]
Length = 1052
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|225436589|ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
vinifera]
Length = 1764
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 206/575 (35%), Positives = 313/575 (54%), Gaps = 79/575 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+EGL++L+ + NV+L DEMGLGKT+Q++S L +L+ +Q GPFLV+ P
Sbjct: 616 GQLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIYGPFLVVVP 675
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W E K+ P L V+ YVG R R ++ + K+ + + F+ LLT
Sbjct: 676 LSTLSNWAKEFKKWLPDLNVIVYVGTRASREVCQQYEFYTNKKTGRT-----ILFNALLT 730
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+VVL D+ LS+I W Y ++DEA RLKN + LY L E F +LL+TGTP+QN++
Sbjct: 731 TYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSE-FSAKNKLLITGTPLQNSV 789
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL+HF P F + F+ +K+ + + +L L +LRR
Sbjct: 790 EELWALLHFLDPDKFKNKDDFVQNYKNLSSFNEM--------ELANLHMELRPHILRRVI 841
Query: 275 QKLVECGHLMLPP------LTEITVLQKKVYASILRKE--------------LPKLLALS 314
+ + + LPP E++ LQK+ Y IL + L ++
Sbjct: 842 KDVEKS----LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVEL 897
Query: 315 SRTANHQSLQNTA----------------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
+ NH L +A SGKLV+LD LL+KL+ + HRVL+F+
Sbjct: 898 KKCCNHPFLFESADHGYGGNRSTNDCGKLERLILSSGKLVLLDKLLEKLHETNHRVLIFS 957
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM + LDIL +++ LR + ++RLDGS +AE R A+ HF+ A G+D F F
Sbjct: 958 QMVRMLDILAEYMSLRGFQFQRLDGSTKAELRQQAMDHFN-----------APGSDDFCF 1006
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V VT +VEE
Sbjct: 1007 LLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEE 1066
Query: 473 VIMRRAERKLRLSHNVVGD-----DVVDREVKERTAVETDDLRSII-FGLHLFDPKAINN 526
I++RA++K+ L H V+ + +E K+ + + ++L +I+ FG + N
Sbjct: 1067 NILKRAKQKMVLDHLVIQKLNAEGRLEKKESKKGSYFDKNELSAILRFGAEELFKEDKNE 1126
Query: 527 EESDDLRLS-GLNSMVEKVIAMRHEQVSGKAGRKF 560
EES LS ++ ++E+ + E+ +G+ G +
Sbjct: 1127 EESKKRLLSMDIDEILERAEKV-EEKETGEEGNEL 1160
>gi|351697662|gb|EHB00581.1| Putative global transcription activator SNF2L1, partial
[Heterocephalus glaber]
Length = 996
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 196/493 (39%), Positives = 268/493 (54%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 125 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 184
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R + P +DV +T+Y
Sbjct: 185 TLHNWMNEFKRWVPSLRVICFVGDKDARAAF------------ICDEMIPGEWDVCVTSY 232
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 233 EMVIKEKSVFKKFHWRYVVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 291
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ +R L +L F+LRR K
Sbjct: 292 LWALLNFLLPDVFNSSDDFDSWFDTKNCFGDQKLVER---------LHAVLKPFLLRRIK 342
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ LPP EI + +Q++ Y IL K+ L +L
Sbjct: 343 TDVERS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 398
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL +L G RVL+F+QMT+ LD
Sbjct: 399 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLSRLKEQGSRVLIFSQMTRLLD 458
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 459 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NVPNSSKFIFMLST 516
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T+ TVEE I+
Sbjct: 517 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDDTVEERIVE 576
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 577 RAEIKLRLDSIVI 589
>gi|296195484|ref|XP_002745366.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 isoform 1
[Callithrix jacchus]
Length = 1052
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|296083825|emb|CBI24213.3| unnamed protein product [Vitis vinifera]
Length = 1539
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 206/572 (36%), Positives = 312/572 (54%), Gaps = 79/572 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+EGL++L+ + NV+L DEMGLGKT+Q++S L +L+ +Q GPFLV+ P
Sbjct: 419 GQLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIYGPFLVVVP 478
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W E K+ P L V+ YVG R R ++ + K+ + + F+ LLT
Sbjct: 479 LSTLSNWAKEFKKWLPDLNVIVYVGTRASREVCQQYEFYTNKKTGRT-----ILFNALLT 533
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+VVL D+ LS+I W Y ++DEA RLKN + LY L E F +LL+TGTP+QN++
Sbjct: 534 TYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSE-FSAKNKLLITGTPLQNSV 592
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL+HF P F + F+ +K+ + + +L L +LRR
Sbjct: 593 EELWALLHFLDPDKFKNKDDFVQNYKNLSSFNEM--------ELANLHMELRPHILRRVI 644
Query: 275 QKLVECGHLMLPP------LTEITVLQKKVYASILRKE--------------LPKLLALS 314
+ + + LPP E++ LQK+ Y IL + L ++
Sbjct: 645 KDVEKS----LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVEL 700
Query: 315 SRTANHQSLQNTA----------------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
+ NH L +A SGKLV+LD LL+KL+ + HRVL+F+
Sbjct: 701 KKCCNHPFLFESADHGYGGNRSTNDCGKLERLILSSGKLVLLDKLLEKLHETNHRVLIFS 760
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM + LDIL +++ LR + ++RLDGS +AE R A+ HF+ A G+D F F
Sbjct: 761 QMVRMLDILAEYMSLRGFQFQRLDGSTKAELRQQAMDHFN-----------APGSDDFCF 809
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V VT +VEE
Sbjct: 810 LLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEE 869
Query: 473 VIMRRAERKLRLSHNVVGD-----DVVDREVKERTAVETDDLRSII-FGLHLFDPKAINN 526
I++RA++K+ L H V+ + +E K+ + + ++L +I+ FG + N
Sbjct: 870 NILKRAKQKMVLDHLVIQKLNAEGRLEKKESKKGSYFDKNELSAILRFGAEELFKEDKNE 929
Query: 527 EESDDLRLS-GLNSMVEKVIAMRHEQVSGKAG 557
EES LS ++ ++E+ + E+ +G+ G
Sbjct: 930 EESKKRLLSMDIDEILERAEKV-EEKETGEEG 960
>gi|380022776|ref|XP_003695213.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Apis florea]
Length = 959
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 199/517 (38%), Positives = 286/517 (55%), Gaps = 76/517 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ EL+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 128 SGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHFRNIPGPHIVIV 187
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRN-IRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E K+ P L + +G+ E R IR M P +DV
Sbjct: 188 PKSTLANWMNEFKKWCPSLRAVCLIGDAETRNTFIREVMM-------------PGEWDVC 234
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++V+ ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QN
Sbjct: 235 VTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLLTGTPLQN 293
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P VF + + F S F +++S + E+ L +L F+LRR
Sbjct: 294 NLHELWSLLNFLLPDVFNSSDDFDSWF----NTNSFLGDNSLVER---LHAVLRPFLLRR 346
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLA 312
K + VE G L P EI V +Q++ Y +L K+ L +L
Sbjct: 347 LKSE-VEKG---LKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILM 402
Query: 313 LSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A GK+V+LD LL KL RVL+F+QMT+
Sbjct: 403 QLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRM 462
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D+ R + Y RLDG+ E+R I ++ A G++ F+FM+STR
Sbjct: 463 LDILEDYCHWRGFQYCRLDGNTAHEDRQRQINEYN-----------APGSEKFIFMLSTR 511
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V +TE+TVEE I+ R
Sbjct: 512 AGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVER 571
Query: 478 AERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII 513
AE KLRL V+ +VD ++TA+ D++ ++I
Sbjct: 572 AEVKLRLDKLVIQQGRLVD---AKQTALNKDEMLNMI 605
>gi|431909219|gb|ELK12808.1| Putative global transcription activator SNF2L1 [Pteropus alecto]
Length = 1012
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 196/493 (39%), Positives = 271/493 (54%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 174 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 233
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 234 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 281
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 282 EMIIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 340
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F + VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 341 LWALLNFLLSDVFNSADDFDSWFDTKNCLGDQKLVER---------LHTVLKPFLLRRIK 391
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 392 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSAGKMDKMRLLNILMQL 447
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 448 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLVKLKEQGSRVLIFSQMTRLLD 507
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE + F+FM+ST
Sbjct: 508 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAF--NVPNSSKFIFMLST 565
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 566 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 625
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 626 RAEIKLRLDSIVI 638
>gi|410442557|ref|NP_001258588.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Pan troglodytes]
gi|343962353|dbj|BAK62764.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Pan troglodytes]
Length = 1052
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTADMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|432114072|gb|ELK36119.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Myotis davidii]
Length = 1052
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|355749594|gb|EHH53993.1| hypothetical protein EGM_14722 [Macaca fascicularis]
Length = 1052
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|350403453|ref|XP_003486806.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Bombus impatiens]
Length = 959
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 199/517 (38%), Positives = 286/517 (55%), Gaps = 76/517 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ EL+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 128 SGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHFRNIPGPHIVIV 187
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRN-IRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E K+ P L + +G+ E R IR M P +DV
Sbjct: 188 PKSTLANWMNEFKKWCPSLRAVCLIGDAETRNTFIREVMM-------------PGEWDVC 234
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++V+ ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QN
Sbjct: 235 VTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLLTGTPLQN 293
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P VF + + F S F +++S + E+ L +L F+LRR
Sbjct: 294 NLHELWSLLNFLLPDVFNSSDDFDSWF----NTNSFLGDNSLVER---LHAVLRPFLLRR 346
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLA 312
K + VE G L P EI V +Q++ Y +L K+ L +L
Sbjct: 347 LKSE-VEKG---LKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILM 402
Query: 313 LSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A GK+V+LD LL KL RVL+F+QMT+
Sbjct: 403 QLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRM 462
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D+ R + Y RLDG+ E+R I ++ A G++ F+FM+STR
Sbjct: 463 LDILEDYCHWRGFQYCRLDGNTAHEDRQRQINEYN-----------APGSEKFIFMLSTR 511
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V +TE+TVEE I+ R
Sbjct: 512 AGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVER 571
Query: 478 AERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII 513
AE KLRL V+ +VD ++TA+ D++ ++I
Sbjct: 572 AEVKLRLDKLVIQQGRLVD---AKQTALNKDEMLNMI 605
>gi|328785433|ref|XP_396195.3| PREDICTED: chromatin-remodeling complex ATPase chain Iswi isoform 1
[Apis mellifera]
Length = 959
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 199/517 (38%), Positives = 286/517 (55%), Gaps = 76/517 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ EL+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 128 SGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHFRNIPGPHIVIV 187
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRN-IRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E K+ P L + +G+ E R IR M P +DV
Sbjct: 188 PKSTLANWMNEFKKWCPSLRAVCLIGDAETRNTFIREVMM-------------PGEWDVC 234
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++V+ ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QN
Sbjct: 235 VTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLLTGTPLQN 293
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P VF + + F S F +++S + E+ L +L F+LRR
Sbjct: 294 NLHELWSLLNFLLPDVFNSSDDFDSWF----NTNSFLGDNSLVER---LHAVLRPFLLRR 346
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLA 312
K + VE G L P EI V +Q++ Y +L K+ L +L
Sbjct: 347 LKSE-VEKG---LKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILM 402
Query: 313 LSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A GK+V+LD LL KL RVL+F+QMT+
Sbjct: 403 QLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRM 462
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D+ R + Y RLDG+ E+R I ++ A G++ F+FM+STR
Sbjct: 463 LDILEDYCHWRGFQYCRLDGNTAHEDRQRQINEYN-----------APGSEKFIFMLSTR 511
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V +TE+TVEE I+ R
Sbjct: 512 AGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVER 571
Query: 478 AERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII 513
AE KLRL V+ +VD ++TA+ D++ ++I
Sbjct: 572 AEVKLRLDKLVIQQGRLVD---AKQTALNKDEMLNMI 605
>gi|393905983|gb|EJD74129.1| type III restriction enzyme [Loa loa]
Length = 1138
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 200/508 (39%), Positives = 283/508 (55%), Gaps = 74/508 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+EG++W++ + + +L DEMGLGKT+Q+ISFLS L G FLV+ PL
Sbjct: 503 ELRDYQLEGVNWMLHAWTKENSCILADEMGLGKTIQSISFLSVLYHKYQLYGTFLVVVPL 562
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLLT 154
S W E + P L V+ YVG+ R IR+ +Y + + L +V+LT
Sbjct: 563 STIASWQREFETWAPDLNVVTYVGDITSRDLIRQFELY--------VQSTKRLKVNVVLT 614
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+++L D+ FL W +DEA RLKN S+LY L E F RLL+TGTP+QN+L
Sbjct: 615 TYEILLKDKFFLGSFEWTVLTVDEAHRLKNDESLLYRSLFE-FTTNHRLLVTGTPLQNSL 673
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL+HF MP F + +F + D+ H + A SL L F+LRR K
Sbjct: 674 KELWALLHFIMPEKFDSWPEFEAEHHDSDHKTIA-----------SLHRKLQPFLLRRVK 722
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRK---ELPKLLALS----------- 314
+ + + LP E +T QK+ Y IL K EL K + S
Sbjct: 723 KDVEKS----LPAKVEQILRVDMTAQQKQYYKWILTKNYKELSKGVKGSINGFVNLVMEL 778
Query: 315 SRTANHQSLQNT-----------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH SL + +SGKL++LD LL +L +GHRVL+F+QM
Sbjct: 779 KKCCNHSSLVRSYDQPEEGADARLQQLLKSSGKLILLDKLLCRLQETGHRVLIFSQMVMM 838
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+Q++L+LR++ +RLDGS+R++ R AA+ HF+ ++ + F F++STR
Sbjct: 839 LDIMQEYLQLRRFPSQRLDGSMRSDLRKAALDHFNAPNSPD-----------FCFLLSTR 887
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V LVT+ +VEE I+ R
Sbjct: 888 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQKKQVNIYRLVTKASVEEEIVER 947
Query: 478 AERKLRLSHNVVGD-DVVDREVKERTAV 504
A+RKL L H ++ D R V +T+
Sbjct: 948 AKRKLVLDHLIIQRMDTTGRTVLSKTSA 975
>gi|344229696|gb|EGV61581.1| chromatin remodelling complex ATPase chain ISW1 [Candida tenuis
ATCC 10573]
Length = 1062
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 187/493 (37%), Positives = 279/493 (56%), Gaps = 64/493 (12%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+ +Q++GL+WLI Y ++ +L DEMGLGKTLQ ISFL YL++ + GPF+V+
Sbjct: 146 VHGKLRDYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIKHIDGPFVVI 205
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E AK+TP++ V+ G +EQR +I Q+Q+ FDVL
Sbjct: 206 VPKSTLDNWRREFAKWTPEVNVVVLQGNKEQRTDIM---------QNQLLTAK---FDVL 253
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++V+ ++ L + W Y ++DEA R+KN S L ++R F RLL+TGTP+QN
Sbjct: 254 VTSFEMVIREKSQLKKFKWEYIVVDEAHRIKNEESSLSQIIR-LFYSRNRLLITGTPLQN 312
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VFG F F D P+ + L +LS F+LRR
Sbjct: 313 NLHELWALLNFLLPDVFGDSEVFDEWF-DNQGGKENPESQDQDQVVQQLHQLLSPFLLRR 371
Query: 273 TKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------PKLLALS 314
K + + +LP + +T +Q+K Y +L K++ +LL +
Sbjct: 372 VKADVEKS---LLPKIETNVYIGMTDMQRKWYRQLLEKDIDAVNGAVGKREGKTRLLNIV 428
Query: 315 ---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH L + A +GK+++LD +L K G RVL+F+QM++
Sbjct: 429 MQLRKCCNHPYLFDGAEPGPPFTTDEHLVFNAGKMIILDKMLSKFKREGSRVLIFSQMSR 488
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ LR+Y+Y R+DGS EER AI ++ A ++ F+F+++T
Sbjct: 489 LLDILEDYCFLREYNYCRIDGSTSHEERIQAIDDYN-----------APDSEKFIFLLTT 537
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL AD VI Y+ DWNPQ D QA+ RAHRIGQ V V+E+ +EE ++
Sbjct: 538 RAGGLGINLTTADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVSENAIEEKVLE 597
Query: 477 RAERKLRLSHNVV 489
RA +KLRL V+
Sbjct: 598 RAAQKLRLDQLVI 610
>gi|354473626|ref|XP_003499035.1| PREDICTED: probable global transcription activator SNF2L1
[Cricetulus griseus]
Length = 1009
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 197/493 (39%), Positives = 270/493 (54%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +QV GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 138 LRDYQVRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 197
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG++E R R + P +DV +T+Y
Sbjct: 198 TLHNWMNEFKRWVPSLRVICFVGDKEVRAAFIR------------DEMMPGEWDVCVTSY 245
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 246 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 304
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+L K
Sbjct: 305 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQRLVER---------LHAVLKPFLLHGIK 355
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 356 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 411
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL K+ G RVL+F+QMT+ LD
Sbjct: 412 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVALDKLLAKIKEQGSRVLIFSQMTRLLD 471
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 472 ILEDYCMWRGYEYCRLDGQTPHEEREDKFPEVELLGQRGAIEAF--NAPNSSKFIFMLST 529
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 530 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 589
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 590 RAEIKLRLDSIVI 602
>gi|426246999|ref|XP_004017274.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Ovis aries]
Length = 1052
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|410223740|gb|JAA09089.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Pan troglodytes]
gi|410267210|gb|JAA21571.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Pan troglodytes]
Length = 1052
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|388453347|ref|NP_001253253.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|332217318|ref|XP_003257807.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Nomascus
leucogenys]
gi|402870539|ref|XP_003899273.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Papio
anubis]
gi|355687630|gb|EHH26214.1| hypothetical protein EGK_16126 [Macaca mulatta]
gi|380783625|gb|AFE63688.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|383408717|gb|AFH27572.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
gi|384941584|gb|AFI34397.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Macaca mulatta]
Length = 1052
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|325651836|ref|NP_003592.3| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Homo sapiens]
gi|57014128|sp|O60264.1|SMCA5_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5;
Short=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin A5; AltName: Full=Sucrose
nonfermenting protein 2 homolog; Short=hSNF2H
gi|2967452|dbj|BAA25173.1| hSNF2H [Homo sapiens]
gi|18606276|gb|AAH23144.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Homo sapiens]
gi|119625476|gb|EAX05071.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Homo sapiens]
gi|168275690|dbj|BAG10565.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [synthetic construct]
gi|325463895|gb|ADZ15718.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [synthetic construct]
Length = 1052
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|281337316|gb|EFB12900.1| hypothetical protein PANDA_013661 [Ailuropoda melanoleuca]
Length = 912
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 87 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 146
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 147 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 194
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 195 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 253
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 254 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 306
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 307 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 362
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 363 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 422
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 423 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 471
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 472 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 531
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 532 ERIVERAEMKLRLDSIVI 549
>gi|327277378|ref|XP_003223442.1| PREDICTED: probable global transcription activator SNF2L1-like
[Anolis carolinensis]
Length = 1049
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 268/490 (54%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +QV GL+W+I Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 174 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 233
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L + +G+++ R R + + P +DV +T+Y
Sbjct: 234 TLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDV------------MMPGEWDVCVTSY 281
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 282 EMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNLHE 340
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + F S F K+ + +R L +L F+LRR K
Sbjct: 341 LWALLNFLLPDVFNSAEDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 391
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 392 AEVEKS----LPPKKEVKIYLGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQL 447
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK+V LD LL KL G RVL+F+QMT+ LD
Sbjct: 448 RKCCNHPYLFDGAEPGPPYTTDTHLVTNSGKMVALDKLLSKLKEQGSRVLVFSQMTRLLD 507
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + FVFM+STRAG
Sbjct: 508 ILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN-----------APNSRKFVFMLSTRAG 556
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 557 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 616
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 617 IKLRLDSIVI 626
>gi|366993054|ref|XP_003676292.1| hypothetical protein NCAS_0D03500 [Naumovozyma castellii CBS 4309]
gi|342302158|emb|CCC69931.1| hypothetical protein NCAS_0D03500 [Naumovozyma castellii CBS 4309]
Length = 1025
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 192/520 (36%), Positives = 290/520 (55%), Gaps = 73/520 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ L+P+Q++GL+WL+ + G+ +L DEMGLGKTLQ I+FL YLK+ + GPFLV+
Sbjct: 109 IHGTLRPYQIQGLNWLVSLHKNGLAGILADEMGLGKTLQTIAFLGYLKYMEGINGPFLVI 168
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ K+TP ++ G++++R ++ +KE+ + FD++
Sbjct: 169 APKSTLNNWLREINKWTPDVKAFVLQGDKQERASL-------IKEKLMTCD-----FDIV 216
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ + W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 217 VASYEIIIREKAAFKKFNWEYIIIDEAHRIKNEESLLSQVLRE-FTSRNRLLITGTPLQN 275
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F ++ + K+ +Q L +L F+LRR
Sbjct: 276 NLHELWALLNFLLPDIFSSSQDFDDWFS---SETTEEDQDKVVKQ---LHTVLQPFLLRR 329
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----------- 315
K VE L P E+ + +QKK Y IL K+L + +S
Sbjct: 330 IKND-VETSLL---PKKELNLYVGMSNMQKKWYKKILEKDLDAVNGENSSKESKTRLLNI 385
Query: 316 -----RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NH L + A S KL VLD LLKK+ G RVL+F+QM+
Sbjct: 386 VMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSKKLQVLDKLLKKMKEDGSRVLIFSQMS 445
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ R Y Y R+DGS E+R +I ++ A +D F+F+++
Sbjct: 446 RVLDILEDYCFFRGYKYCRIDGSTDHEDRIKSIDDYN-----------APDSDKFIFLLT 494
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V VT+++VEE I+
Sbjct: 495 TRAGGLGINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDNSVEEKIL 554
Query: 476 RRAERKLRLSHNVVGDD--VVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + +++ KE D L S+I
Sbjct: 555 ERATQKLRLDQLVIQQNKASMNKNKKESKKDAKDALLSMI 594
>gi|425768760|gb|EKV07276.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum PHI26]
gi|425776120|gb|EKV14354.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum Pd1]
Length = 1096
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 186/496 (37%), Positives = 279/496 (56%), Gaps = 77/496 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ EL+ +QV GL+WL+ + G++ +L DEMGLGKTLQ ISFL YL++ + GP LV+
Sbjct: 180 IHGELRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYLRYIRDINGPHLVV 239
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E AK+TP ++VL G +E+R+ + + E + E+ FDV
Sbjct: 240 VPKSTLDNWKREFAKWTPDIDVLVLQGNKEERQQL---INERLVEEE---------FDVC 287
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+++L ++ L + W Y +IDEA R+KN S L ++R F RLL+TGTP+QN
Sbjct: 288 ITSYEMILREKSHLKKFAWEYIVIDEAHRIKNEESSLSQIIR-LFNSRNRLLITGTPLQN 346
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VFG F D S+ + + +Q L +L F+LRR
Sbjct: 347 NLHELWALLNFLLPDVFGDSEAF-----DQWFSNQDSDQETVVQQ---LHRVLRPFLLRR 398
Query: 273 TKQKLVECGHLMLP--------PLTEITVLQKKVYASILRKELPKLLALSS--------- 315
K + + +LP P++E +Q++ Y IL K++ + +
Sbjct: 399 VKSDVEKS---LLPKKELNLYVPMSE---MQRRWYQKILEKDIDAVNGAAGKRESKTRLL 452
Query: 316 -------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L A SGK+V+LD LLK++ G RVL+F+Q
Sbjct: 453 NIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMVILDKLLKRMQADGSRVLIFSQ 512
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R Y+Y R+DG+ E+R AAI ++ G+D FVF+
Sbjct: 513 MSRVLDILEDYCCFRDYNYCRIDGTTAHEDRIAAIDDYN-----------KPGSDKFVFL 561
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL +AD V+ ++ DWNPQ D QA+ RAHRIGQ V +TE+ +EE
Sbjct: 562 LTTRAGGLGINLTSADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFITENAIEEK 621
Query: 474 IMRRAERKLRLSHNVV 489
++ RA +KLRL V+
Sbjct: 622 VLERAAQKLRLDQLVI 637
>gi|348524410|ref|XP_003449716.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Oreochromis
niloticus]
Length = 1036
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 192/491 (39%), Positives = 273/491 (55%), Gaps = 70/491 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
T +++ +QV GL+WLI Y G+N +L DEMGLGKTLQ I+ L Y+K + PGP +VL
Sbjct: 160 TGKMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLV 219
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W++E ++ P L + +G+R++R + R + + P +DV +
Sbjct: 220 PKSTLYNWMNEFKRWVPSLRAVCLIGDRDERTALIRDV------------LLPGEWDVCV 267
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y+++++++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNN
Sbjct: 268 TSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNN 326
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F S F +++ K+ E+ L +L F+LRR
Sbjct: 327 LHELWALLNFLLPDVFNSSEDFDSWF----DTNNCLGDQKLVER---LHTVLRPFLLRRI 379
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKL--------------LAL 313
K + + L P EI + +Q++ Y IL K++ L L
Sbjct: 380 KADVEKT----LLPKKEIKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLNVLMQ 435
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ L
Sbjct: 436 LRKCCNHPYLFDGAEPGPPYTTDIHLAVNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRML 495
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y Y RLDG EER +I F+ ++ F+FM+STRA
Sbjct: 496 DILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNS-----------SKFIFMLSTRA 544
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +TE+TVEE I+ RA
Sbjct: 545 GGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERIVERA 604
Query: 479 ERKLRLSHNVV 489
E KLRL V+
Sbjct: 605 EMKLRLDSIVI 615
>gi|56118945|ref|NP_001007993.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Xenopus (Silurana)
tropicalis]
gi|51704071|gb|AAH80870.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Xenopus (Silurana)
tropicalis]
Length = 1049
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 194/499 (38%), Positives = 275/499 (55%), Gaps = 72/499 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 166 DSPSYVKGGTLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIP 225
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W++E ++ P L + +G+++ R R + + P
Sbjct: 226 GPHMVLVPKSTLHNWMAEFKRWVPSLCAICLIGDKDHRAAFVRDV------------LLP 273
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 274 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 332
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P VF + F S F +++ K+ E+ L +L
Sbjct: 333 GTPLQNNLHELWALLNFLLPDVFNSAEDFDSWF----DTNNCLGDQKLVER---LHMVLK 385
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT--- 317
F+LRR K + + LPP EI + +Q++ Y IL K++ +L S +T
Sbjct: 386 PFLLRRIKADVEKS----LPPKKEIKIYVGLSKMQREWYTKILMKDI-DILNSSGKTDKM 440
Query: 318 ------------ANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLL 350
NH L + T SGK+VVLD LL +L G RVL+
Sbjct: 441 RLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPRLKEQGSRVLI 500
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LDIL+D+ R Y Y RLDG EER +I ++ A G+ F
Sbjct: 501 FSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQDSIIAYN-----------APGSSKF 549
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TV
Sbjct: 550 IFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRYITDNTV 609
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE I+ RAE KLRL V+
Sbjct: 610 EERIVERAEMKLRLDSIVI 628
>gi|299751086|ref|XP_001830045.2| transcription regulator [Coprinopsis cinerea okayama7#130]
gi|298409213|gb|EAU91710.2| transcription regulator [Coprinopsis cinerea okayama7#130]
Length = 1441
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 194/493 (39%), Positives = 273/493 (55%), Gaps = 75/493 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK Q+ GL+WL + G N +L DEMGLGKT+Q +SFLSYL GPFLV+ P
Sbjct: 384 GQLKDFQLTGLNWLAYIWSKGDNGILADEMGLGKTVQTVSFLSYLFHEMNQYGPFLVIVP 443
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W S+ A + P + V+ Y+G R IRR + ++ +M +VLLT
Sbjct: 444 LSTITAWQSQFATWAPDMNVVTYIGNAPARDVIRRYEFGTPPKKVKM--------NVLLT 495
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+++L D L +I W +DEA RLKN S LY LR F +LL+TGTP+QNN+
Sbjct: 496 TYELILRDAKELCEIKWQALAVDEAHRLKNSESQLYEALRS-FSAASKLLITGTPLQNNV 554
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F N+F DA H KIKE L L ++MLRR K
Sbjct: 555 RELMSLMHFLMPDKFALTNEF--DLNDADHD-------KIKE----LHQQLESYMLRRLK 601
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ ++ LP +E ++ LQ Y +IL K L+ ++
Sbjct: 602 RDVLTS----LPTKSERILRVEMSALQTHFYKNILTKNFAGLVKSANGNQNISLLNIAME 657
Query: 316 --RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L + A SGK+V+LD LL +L GHRVL+F+QM +
Sbjct: 658 LKKAANHPYLFDGAEVRTDNNEETLKGLVMSSGKMVLLDKLLARLRQDGHRVLIFSQMVR 717
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++ LR Y ++RLDG + ++ R AI HF+ +++ + F F++ST
Sbjct: 718 MLDILSDYMTLRGYQHQRLDGMVGSDLRKKAIAHFNAENSPD-----------FAFLLST 766
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE ++
Sbjct: 767 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLE 826
Query: 477 RAERKLRLSHNVV 489
RA+RK+ L + ++
Sbjct: 827 RAKRKMVLEYAII 839
>gi|40215423|gb|AAR82736.1| SD21488p [Drosophila melanogaster]
Length = 1645
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 218/585 (37%), Positives = 313/585 (53%), Gaps = 87/585 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPL 95
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PL
Sbjct: 528 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLY-GPFLCVVPL 586
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ + R I++ YE E S+ L F+ +LTT
Sbjct: 587 STMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQ--YEWQFESSKR-----LKFNCILTT 639
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 640 YEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLK 698
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F T F V +A +G +T L L ++LRR K+
Sbjct: 699 ELWALLHFIMPDKFDTWENF------EVQHGNAEDKG-----YTRLHQQLEPYILRRVKK 747
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQK+ Y IL K L + N
Sbjct: 748 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCN 807
Query: 320 HQSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
H +L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+
Sbjct: 808 HAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDV 867
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L D+L+ R + ++RLDGSI+ E R A+ HF+ A G+ F F++STRAGG
Sbjct: 868 LADYLQKRHFPFQRLDGSIKGEMRRQALDHFN-----------AEGSQDFCFLLSTRAGG 916
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++
Sbjct: 917 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 976
Query: 481 KLRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ ++ DDL +I+ FG LF + +E
Sbjct: 977 KMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFK----DEQE 1032
Query: 529 SDDLRLSGLNSMVEKVIAMRHEQVSGKAG---RKFEVNPVALLEE 570
DD + ++ ++ + R+E A F+V +A EE
Sbjct: 1033 HDDDLVCDIDEILRRA-ETRNEDPEMPADDLLSAFKVASIAAFEE 1076
>gi|449304982|gb|EMD00989.1| hypothetical protein BAUCODRAFT_192112 [Baudoinia compniacensis
UAMH 10762]
Length = 1310
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 200/514 (38%), Positives = 279/514 (54%), Gaps = 79/514 (15%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ EL+ Q+ GL++L + G NV+L DEMGLGKT+Q +SF+ +L+ + GPF
Sbjct: 168 EYIKGGELREFQIHGLNFLAHHWCKGNNVILADEMGLGKTVQTVSFMDWLRHDRGQQGPF 227
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP--L 147
+V+ PLS W +TP + + Y G R+ IR E + N +P +
Sbjct: 228 IVVVPLSTMPAWADTFNNWTPDINYVVYSGNETARKIIR--------EYELLVNGNPRKV 279
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
F+VLLTTY+ +L D GFLSQ+ W + +DEA RLKN S LY L + F P RLL+TG
Sbjct: 280 KFNVLLTTYEYILADSGFLSQLKWQFMAVDEAHRLKNRESQLYAKLMD-FGAPSRLLITG 338
Query: 208 TPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSA 267
TP+QN LSEL ALM F MP G +N L+ + +S KI E L +S
Sbjct: 339 TPMQNTLSELSALMDFLMP---GRINVDLN-----IDLTSEDASKKIAE----LTDAISP 386
Query: 268 FMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS------- 314
+M+RRTKQK+ LPP T E++ +Q + Y +IL + L A S
Sbjct: 387 YMIRRTKQKVEHD----LPPKTEKIIRVELSDVQLEYYKNILTRNYAALNAGSKAQKTSL 442
Query: 315 -------SRTANHQSLQNTA---------------------SGKLVVLDLLLKKLYNSGH 346
+ +NH + A SGK++VLD LL K GH
Sbjct: 443 LNIMMELKKASNHPFMFPNAEERFLDGKDSREDQLKALVSTSGKMIVLDRLLAKFKQEGH 502
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDIL D+L+LR + ++RLDG+I A R AI HF+ + +
Sbjct: 503 RVLIFSQMVKMLDILGDYLQLRGHQFQRLDGTIAAGARRLAIDHFNAPESQD-------- 554
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V V+
Sbjct: 555 ---FCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQKKPVTIYRFVS 611
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
+ TVEE ++ RA KL L + + V D++ +E
Sbjct: 612 KDTVEEEVLERARNKLMLEYITIQRGVTDKDARE 645
>gi|363748610|ref|XP_003644523.1| hypothetical protein Ecym_1481 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888155|gb|AET37706.1| hypothetical protein Ecym_1481 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1034
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 196/520 (37%), Positives = 285/520 (54%), Gaps = 77/520 (14%)
Query: 11 AKIIHDNDERDGQTPV--DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGK 68
A++I D + R +T V ++ + +L+ +Q+ GL+WLI + ++ +L DEMGLGK
Sbjct: 101 AELIQDEEGRLSETTVLTESPNYVKAGKLREYQIYGLNWLISLHENKLSGILADEMGLGK 160
Query: 69 TLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIR 128
TLQ ISFL YLKF + GPF+V+ P S D W E +K+TP + L G++E R +
Sbjct: 161 TLQTISFLGYLKFIKNIDGPFIVVVPKSTLDNWKREFSKWTPDVRTLILQGDKETRAKLL 220
Query: 129 RTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSV 188
+ FDVL+T+Y++V+ ++ L + W Y +IDEA R+KN S
Sbjct: 221 E------------DRILSCDFDVLITSYEMVIKEKAALKKFAWQYIVIDEAHRIKNEQST 268
Query: 189 LYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSA 248
L ++R F RLL+TGTP+QNNL ELWAL++F +P VFG F F+
Sbjct: 269 LSQIIR-LFYSKGRLLITGTPLQNNLHELWALLNFLLPDVFGESEVFDEWFQ-------- 319
Query: 249 PKRGKIKEQ---FTSLKGILSAFMLRRTKQKLVECGHLMLPPL-TEITV----LQKKVYA 300
+ K ++Q L +L F+LRR K E +LP + T + V +Q + Y
Sbjct: 320 -QNDKDQDQEVVVQQLHAVLQPFLLRRVK---AEVEKSLLPKIETNVYVGMAGMQLQWYK 375
Query: 301 SILRKEL-------------PKLLALS---SRTANHQSLQNTA---------------SG 329
S+L K++ +LL + + NH L A SG
Sbjct: 376 SLLEKDIDAVNGAVAKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPFTTDEHLIYNSG 435
Query: 330 KLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIR 389
K++VLD LLK+ G RVL+F+QM++ LDIL+D+ R+Y Y R+DGS EER AI
Sbjct: 436 KMIVLDKLLKRKQMEGSRVLIFSQMSRLLDILEDYCYFREYEYCRMDGSTSHEERIQAID 495
Query: 390 HFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQR 449
F+ A ++ F+F+++TRAGG+G+NLV ADTV+ Y+ DWNPQ D QA+ R
Sbjct: 496 DFN-----------APDSNKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDR 544
Query: 450 AHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
AHRIGQ V VTE+ +EE ++ RA +KLRL V+
Sbjct: 545 AHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVI 584
>gi|195435393|ref|XP_002065676.1| GK15574 [Drosophila willistoni]
gi|194161761|gb|EDW76662.1| GK15574 [Drosophila willistoni]
Length = 1941
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 217/584 (37%), Positives = 312/584 (53%), Gaps = 85/584 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL L Q GPFL + PLS
Sbjct: 550 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYALFKIQHLYGPFLCVVPLS 609
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E + P + V+ Y+G+ + R I++ YE E S+ L F+ +LTTY
Sbjct: 610 TMTAWQREFDLWAPDMNVVTYLGDVKSRELIQQ--YEWQFEGSKR-----LKFNCILTTY 662
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L E
Sbjct: 663 EIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLKE 721
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP F T F + +A +G +T L L ++LRR K+
Sbjct: 722 LWALLHFIMPEKFDTWENF------ELQHGNAEDKG-----YTRLHQQLEPYILRRVKKD 770
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTANH 320
+ + + + E+T LQK+ Y IL K L + NH
Sbjct: 771 VEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNH 830
Query: 321 QSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
+L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+L
Sbjct: 831 AALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVL 890
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
D+L+ R +S++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG+
Sbjct: 891 ADYLQKRHFSFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGGL 939
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++K
Sbjct: 940 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQK 999
Query: 482 LRLSHNVVGD-DVVDREVKERTA---------VETDDLRSII-FGL-HLFDPKAINNEES 529
+ L H V+ D R V +++ DDL +I+ FG LF + +E
Sbjct: 1000 MVLDHLVIQRMDTTGRTVLDKSGSGHSTNSNPFNKDDLSAILKFGAEELFK----DEQEH 1055
Query: 530 DDLRLSGLNSMVEKVIAMRHEQVSGKAG---RKFEVNPVALLEE 570
DD + ++ ++ + R+E A F+V +A EE
Sbjct: 1056 DDELVCDIDEILRRA-ETRNEDPEMPADDLLSAFKVASIAAFEE 1098
>gi|354488354|ref|XP_003506335.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Cricetulus griseus]
Length = 1042
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 160 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 219
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 220 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 267
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 268 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 326
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 327 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 379
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 380 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 435
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 436 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 495
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 496 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 544
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 545 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 604
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 605 ERIVERAEMKLRLDSIVI 622
>gi|345306756|ref|XP_001509678.2| PREDICTED: probable global transcription activator SNF2L1-like
[Ornithorhynchus anatinus]
Length = 1011
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 193/490 (39%), Positives = 269/490 (54%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +QV GL+W+I Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 136 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 195
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L + +G+++ R R + + P +DV +T+Y
Sbjct: 196 TLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDV------------MMPGEWDVCVTSY 243
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 244 EMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNLHE 302
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 303 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 353
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 354 AEVEKS----LPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQL 409
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL KL G RVL+F+QMT+ LD
Sbjct: 410 RKCCNHPYLFDGAEPGPPYTTDTHLVNNSGKMVALDKLLSKLKEQGSRVLIFSQMTRLLD 469
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 470 ILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN-----------APNSSKFIFMLSTRAG 518
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVE+ I+ RAE
Sbjct: 519 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEDRIVERAE 578
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 579 IKLRLDSIVI 588
>gi|452989426|gb|EME89181.1| hypothetical protein MYCFIDRAFT_114041, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1451
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 196/507 (38%), Positives = 274/507 (54%), Gaps = 75/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ GL++L + G NV+L DEMGLGKT+Q +SF+++L++ + GPF+V+ P
Sbjct: 377 GELREFQIHGLNFLAHHWCRGNNVILADEMGLGKTVQTVSFMNWLRYDRRQQGPFIVVVP 436
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +TP L + Y G R+ IR YE + + N + F+VLLT
Sbjct: 437 LSTMPAWADTFDNWTPDLNYVVYNGNEAARKVIRE--YELLVD----GNPKKVKFNVLLT 490
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D FLSQI W + +DEA RLKN S LY L + F P RLL+TGTP+QN L
Sbjct: 491 TYEYILADATFLSQIKWQFMAVDEAHRLKNRESQLYAKLMD-FGAPSRLLITGTPMQNTL 549
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
SEL ALM F MP T + H+S ++ L +S +M+RRTK
Sbjct: 550 SELSALMDFLMPGKIHVEENIDLT---SEHAS---------KKLAELTDAISPYMIRRTK 597
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLA---------------- 312
QK+ LPP TE + +Q + Y +IL + L A
Sbjct: 598 QKVEND----LPPKTEKIIRVELADVQLEYYKNILTRNYAALNAGNKAQKTSLLNIMMEL 653
Query: 313 -----------------LSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
L+ A L+ T+SGK++++D LL K+ GHRVL+F+Q
Sbjct: 654 KKASNHPFMFPNAEERILAGSEAREDQLKALITSSGKMMLIDQLLMKMRKDGHRVLIFSQ 713
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M + LDIL D+L+LR Y ++RLDG+I A R AI HF+ + + F F+
Sbjct: 714 MVKMLDILGDYLQLRGYQFQRLDGTIAAGPRRMAIDHFNAPDSQD-----------FCFL 762
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ TVEE
Sbjct: 763 LSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQKKPVTIYRLVSKDTVEEE 822
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKE 500
++ RA KL L + V D++ +E
Sbjct: 823 VLERARNKLMLEFITIQRGVTDKDARE 849
>gi|340939504|gb|EGS20126.1| complex ATPase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1137
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 192/497 (38%), Positives = 273/497 (54%), Gaps = 79/497 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ ++ +Q+ GL+WLI + G++ +L DEMGLGKTLQ ISFL YL+ Q GP LV
Sbjct: 181 IKGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHIQGITGPHLVA 240
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E K+TP + VL G +E+R + + + + ++ FDV
Sbjct: 241 VPKSTLDNWKREFEKWTPDVNVLVLQGAKEERHQL---INDRLIDED---------FDVC 288
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+++L ++ L + W Y IIDEA R+KN S L V+R F RLL+TGTP+QN
Sbjct: 289 ITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLSQVIR-MFSSRNRLLITGTPLQN 347
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ---FTSLKGILSAFM 269
NL ELWAL++F +P VFG + F F RG+ ++Q L +L F+
Sbjct: 348 NLHELWALLNFLLPDVFGDSDAFDQWF-----------RGQDRDQDQVVQQLHRVLRPFL 396
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKL 310
LRR K + + L P EI V +Q K Y IL K++ +L
Sbjct: 397 LRRVKSDVEKS----LLPKKEINVYIGMSEMQVKWYKKILEKDIDAVNGAGGKRESKTRL 452
Query: 311 LALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
L + + NH L A SGK++VLD LLK+L + G RVL+F+
Sbjct: 453 LNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIYNSGKMIVLDKLLKRLQSQGSRVLIFS 512
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM++ LDIL+D+ R Y Y R+DG E+R AAI ++ G+D F+F
Sbjct: 513 QMSRLLDILEDYCVFRGYKYCRIDGGTAHEDRIAAIDEYN-----------RPGSDKFIF 561
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
+++TRAGG+G+NL ADTVI Y+ DWNPQ D QA+ RAHRIGQ V+ VT++ +EE
Sbjct: 562 LLTTRAGGLGINLTTADTVILYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEE 621
Query: 473 VIMRRAERKLRLSHNVV 489
++ RA +KLRL V+
Sbjct: 622 KVLERAAQKLRLDQLVI 638
>gi|431918301|gb|ELK17528.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Pteropus alecto]
Length = 1149
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 169 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 228
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 229 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 276
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 277 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 335
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 336 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD----TNNCLGDQKLVER---LHMVLR 388
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 389 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 444
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 445 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 504
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 505 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 553
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 614 ERIVERAEMKLRLDSIVI 631
>gi|449498933|ref|XP_002192409.2| PREDICTED: probable global transcription activator SNF2L1-like
[Taeniopygia guttata]
Length = 1185
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +QV GL+W+I Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 310 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 369
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L + +G+++ R R + + P +DV +T+Y
Sbjct: 370 TLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDV------------MMPGEWDVCVTSY 417
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 418 EMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNLHE 476
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 477 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 527
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 528 GEVEKS----LPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQL 583
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK++VLD LL KL G RVLLF+QMT+ LD
Sbjct: 584 RKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLD 643
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 644 ILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN-----------APNSSKFIFMLSTRAG 692
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 693 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 752
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 753 IKLRLDSIVI 762
>gi|254584336|ref|XP_002497736.1| ZYRO0F12320p [Zygosaccharomyces rouxii]
gi|238940629|emb|CAR28803.1| ZYRO0F12320p [Zygosaccharomyces rouxii]
Length = 983
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 188/494 (38%), Positives = 280/494 (56%), Gaps = 69/494 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q++GL+WLI + ++ +L DEMGLGKTLQ ISFL + ++ + GPFL++ P
Sbjct: 64 GKLRDYQIQGLNWLISLHEHKLSGILADEMGLGKTLQTISFLGHQRYVKGIEGPFLIIVP 123
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S D W E ++TP+++VL G++++RR + + E V E FDVL++
Sbjct: 124 KSTLDNWRREFERWTPEVDVLVLHGDKDERREL---LQERVLEAK---------FDVLIS 171
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++V+ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+TGTP+QNNL
Sbjct: 172 SYEMVIKEKSTLKRVAWQYLVIDEAHRIKNEQSTLSQIIR-LFYSRNRLLITGTPLQNNL 230
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VFG F F+ ++S + + +Q L +LS F+LRR K
Sbjct: 231 HELWALLNFLLPDVFGDAEVFDDWFE---QNNSEQDQETVIQQ---LHTVLSPFLLRRVK 284
Query: 275 QKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------PKLLALS-- 314
+ +LP + +T +Q Y S+L K++ +LL +
Sbjct: 285 ---ADVEKSLLPKIETNLYVGMTEMQVHWYKSLLEKDIDAVNGVVGKREGKTRLLNIVMQ 341
Query: 315 -SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L A +GK++VLD LLKK+ G RVL+F+QM++ L
Sbjct: 342 LRKCCNHPYLFEGAEPGPPYTTDEHLVYNAGKMIVLDKLLKKMKEKGSRVLIFSQMSRLL 401
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y Y R+DGS E+R AI F+ +D FVF+++TRA
Sbjct: 402 DILEDYCYFRDYEYCRIDGSTAHEDRIEAIDEFN-----------KPDSDKFVFLLTTRA 450
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NLV ADTV+ Y+ DWNPQ D QA+ RAHRIGQ V VTE +EE ++ RA
Sbjct: 451 GGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTESAIEEKVIERA 510
Query: 479 ERKLRLSHNVVGDD 492
+KLRL V+ D
Sbjct: 511 AQKLRLDQLVIQQD 524
>gi|367003313|ref|XP_003686390.1| hypothetical protein TPHA_0G01190 [Tetrapisispora phaffii CBS 4417]
gi|357524691|emb|CCE63956.1| hypothetical protein TPHA_0G01190 [Tetrapisispora phaffii CBS 4417]
Length = 1118
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 186/493 (37%), Positives = 277/493 (56%), Gaps = 71/493 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ L+ +Q++GL+WLI Y ++ +L DEMGLGKTLQ ISFL YL++ + GPFLV+
Sbjct: 203 SGTLRDYQIQGLNWLISLYENKLSGILADEMGLGKTLQTISFLGYLRYHKQVDGPFLVIV 262
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S D W E K+TP + + G++E+R +I + K FDVL+
Sbjct: 263 PKSTLDNWRREFKKWTPDVNAVILHGDKEKRHDILQNRVLQAK------------FDVLI 310
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++++ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+TGTP+QNN
Sbjct: 311 TSYEMIIKEKNVLKKVAWEYIVIDEAHRIKNEQSSLSQIIR-LFYSRNRLLITGTPLQNN 369
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F + VF F F+ ++S + + +Q L +L+ F+LRR
Sbjct: 370 LHELWALLNFLLSDVFSDSELFDEWFE---QNNSEEDQEVVVQQ---LHTVLNPFLLRRI 423
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLALS 314
K + + L P E+ + +Q+K Y S+L K++ +LL +
Sbjct: 424 KADVEKS----LLPKIEVNLYVGMAQMQRKWYKSLLEKDIDAVNGAVTKREGKTRLLNIV 479
Query: 315 ---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH L A SGK+++LD LLK+L G RVL+F+QM++
Sbjct: 480 MQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIILDKLLKRLKEKGSRVLIFSQMSR 539
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ LR Y Y R+DGS EER AI ++ + D F+F+++T
Sbjct: 540 LLDILEDYCYLRDYEYCRIDGSTSHEERIEAIDEYNKPDS-----------DKFIFLLTT 588
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NLV ADTV+ ++ DWNPQ D QA+ RAHRIGQ V VTE+ +EE ++
Sbjct: 589 RAGGLGINLVTADTVVLFDSDWNPQADLQAMDRAHRIGQKKQVYVYRFVTENAIEEKVIE 648
Query: 477 RAERKLRLSHNVV 489
RA +KLRL V+
Sbjct: 649 RAAQKLRLDQLVI 661
>gi|410903295|ref|XP_003965129.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Takifugu rubripes]
Length = 1689
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 189/487 (38%), Positives = 280/487 (57%), Gaps = 64/487 (13%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q++GL+W+ + G + +L DEMGLGKT+Q I FL+Y+ GPFL++ PL
Sbjct: 471 ELRDYQLDGLNWMAHSWCKGNSCILADEMGLGKTIQTICFLNYMFNEHQLYGPFLLVVPL 530
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E+ + P++ V+ Y+G+ R IR + HV + + F++LLTT
Sbjct: 531 STLTSWQREIQLWAPQMNVVVYLGDISSRNMIRTHEWIHVHSKK-------MKFNILLTT 583
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL + W + +DEA RLKN S+LY + E F RLL+TGTP+QN+L
Sbjct: 584 YEILLKDKSFLGSVNWAFIGVDEAHRLKNDDSLLYKTMME-FKSNHRLLITGTPLQNSLK 642
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFMLRRTK 274
ELW+L+HF MP F + F + GK ++ +TSL L F+LRR K
Sbjct: 643 ELWSLLHFIMPDKFHSWELF------------EEEHGKGRDSGYTSLHKELEPFLLRRVK 690
Query: 275 QKLVECGHLMLPPL--TEITVLQKKVYASILR---KELPKLLALSS-----------RTA 318
+ + + + + E++ +QK+ Y IL K L K + S+ +
Sbjct: 691 KDVEKSLPAKVEQILRVEMSAIQKQYYKWILTRNYKALSKGVKGSTSGFLNIMMELKKCC 750
Query: 319 NH--------------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
NH ++LQ +SGKLV+LD LL +L GHRVL+F+QM + LDIL
Sbjct: 751 NHCYLIRLPEDDLNKTEALQQLVRSSGKLVLLDKLLIRLKERGHRVLIFSQMVRMLDILA 810
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
D+L R++ ++RLDGSI+ E R A+ HF+ A G++ F F++STRAGG+G
Sbjct: 811 DYLRSRQFLFQRLDGSIKGEMRKQALDHFN-----------AEGSEDFCFLLSTRAGGLG 859
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ +VEE I+ RA++K+
Sbjct: 860 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKM 919
Query: 483 RLSHNVV 489
L H V+
Sbjct: 920 VLDHLVI 926
>gi|307191525|gb|EFN75028.1| Chromatin-remodeling complex ATPase chain Iswi [Camponotus
floridanus]
Length = 1010
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 197/516 (38%), Positives = 286/516 (55%), Gaps = 74/516 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ EL+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 129 SGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHFRNIPGPHIVIV 188
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W++E K+ P L + +G+ E R R + + P +DV +
Sbjct: 189 PKSTLANWMNEFKKWCPSLRAVCLIGDAETRNTFIRDV------------MMPGEWDVCV 236
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++V+ ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 237 TSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTTNRLLLTGTPLQNN 295
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELW+L++F +P VF + + F S F +++S + E+ L +L F+LRR
Sbjct: 296 LHELWSLLNFLLPDVFNSSDDFDSWF----NTNSFLGDNSLVER---LHAVLRPFLLRRL 348
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K + VE G L P EI V +Q++ Y +L K+ L +L
Sbjct: 349 KSE-VEKG---LKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQ 404
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A GK+V+LD LL KL RVL+F+QMT+ L
Sbjct: 405 LRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRML 464
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R + Y RLDG+ E+R I ++ A G++ F+FM+STRA
Sbjct: 465 DILEDYCHWRCFQYCRLDGNTAHEDRQRQINEYN-----------APGSEKFIFMLSTRA 513
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V +TE+TVEE I+ RA
Sbjct: 514 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERA 573
Query: 479 ERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII 513
E KLRL V+ +VD ++TA+ D++ ++I
Sbjct: 574 EVKLRLDKLVIQQGRLVD---AKQTALNKDEMLNMI 606
>gi|297674406|ref|XP_002815220.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like,
partial [Pongo abelii]
Length = 816
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|449499854|ref|XP_002191591.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Taeniopygia
guttata]
Length = 1005
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 192/490 (39%), Positives = 270/490 (55%), Gaps = 70/490 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+ GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +VL P
Sbjct: 130 GKLRDYQIRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVP 189
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E ++ P L + +G+++QR R + + P +DV +T
Sbjct: 190 KSTLQNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDV------------LLPGEWDVCVT 237
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL
Sbjct: 238 SYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNL 296
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + F S F +++ K+ E+ L +L F+LRR K
Sbjct: 297 HELWALLNFLLPDVFNSAEDFDSWF----DTNNCLGDQKLVER---LHMVLRPFLLRRIK 349
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 350 ADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKLDKMRLLNILMQL 405
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + T SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 406 RKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLD 465
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG ER A+I F+ + FVFM+STRAG
Sbjct: 466 ILEDYCMWRNYEYCRLDGQTPHNERQASINAFNDPDS-----------SKFVFMLSTRAG 514
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVEE I+ RAE
Sbjct: 515 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAE 574
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 575 MKLRLDSIVI 584
>gi|150864381|ref|XP_001383167.2| chromatin remodeling complex Adenosinetriphosphatase
[Scheffersomyces stipitis CBS 6054]
gi|149385637|gb|ABN65138.2| chromatin remodeling complex Adenosinetriphosphatase
[Scheffersomyces stipitis CBS 6054]
Length = 1222
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 195/518 (37%), Positives = 289/518 (55%), Gaps = 74/518 (14%)
Query: 15 HDNDERDGQTPV--DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQA 72
H +DE D QT V ++ F +L+ +QV+GL+WLI + ++ +L DEMGLGKTLQ
Sbjct: 271 HQDDE-DHQTTVITESPSFVKEGKLREYQVQGLNWLISLFENRLSGILADEMGLGKTLQT 329
Query: 73 ISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY 132
ISFL YL++ + GPF+V+ P S D W E AK+TP + V+ G ++ R I +
Sbjct: 330 ISFLGYLRYIKKIDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGTKDARHEIIQ--- 386
Query: 133 EHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNV 192
+ + FDVL+T++++V+ ++ L + W Y ++DEA R+KN S L +
Sbjct: 387 ---------NKLLTADFDVLITSFEMVIREKSHLKKFRWEYIVVDEAHRIKNEDSSLSQI 437
Query: 193 LREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTF-----KDAVHSSS 247
+R F RLL+TGTP+QNNL ELWAL++F +P VFG F F +D +
Sbjct: 438 IR-VFYSKNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWFENQGGEDVDEDTR 496
Query: 248 APKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASI 302
+ K+ +Q L +LS F+LRR K VE +LP + +T +Q + Y +
Sbjct: 497 QKNQDKVVQQ---LHQLLSPFLLRRVKAD-VETS--LLPKIETNVYIGMTEMQIQWYKKL 550
Query: 303 LRKEL-------------PKLLALS---SRTANHQSLQNTA---------------SGKL 331
L K++ +LL + + NH L + A SGK+
Sbjct: 551 LEKDIDAVNGVVGKREGKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTNDEHLVFNSGKM 610
Query: 332 VVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHF 391
V+LD +L+K + G RVL+F+QM++ LDIL+D+ LR YSY R+DGS E+R AI +
Sbjct: 611 VILDKMLQKFKSEGSRVLIFSQMSRLLDILEDYCYLRDYSYCRIDGSTSHEDRIEAIDQY 670
Query: 392 SVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAH 451
+ + D F+F+++TRAGG+G+NL +AD VI Y+ DWNPQ D QA+ RAH
Sbjct: 671 NDPES-----------DKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRAH 719
Query: 452 RIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
RIGQ V VTE+ +EE ++ RA +KLRL V+
Sbjct: 720 RIGQKKQVKVYRFVTENAIEEKVLDRAAQKLRLDQLVI 757
>gi|410917974|ref|XP_003972461.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Takifugu rubripes]
Length = 1036
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 191/498 (38%), Positives = 277/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + T +++ +QV GL+WLI Y G+N +L DEMGLGKTLQ I+ L Y+K + P
Sbjct: 152 DSPSYVKTGKMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYRNIP 211
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W++E ++ P L + +G+R++R + R + + P
Sbjct: 212 GPHMVLVPKSTLYNWMNEFKRWVPSLRAVCLIGDRDERTALIRDV------------LLP 259
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y+++++++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 260 GEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 318
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P VF + F S F +++ K+ E+ L +L
Sbjct: 319 GTPLQNNLHELWALLNFLLPDVFNSAEDFDSWF----DTNNCLGDQKLVER---LHTVLR 371
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + L P E+ + +Q++ Y IL K+
Sbjct: 372 PFLLRRIKADVEKT----LLPKKELKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMR 427
Query: 307 LPKLLALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + A SGK+VVLD LL KL + G RVL+F
Sbjct: 428 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKLKDQGSRVLIF 487
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG EER +I F+ ++ F+
Sbjct: 488 SQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNS-----------SKFI 536
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI ++ DWNPQVD QA+ RAHRIGQ V +TE+TVE
Sbjct: 537 FMLSTRAGGLGINLATADVVILFDSDWNPQVDLQAMDRAHRIGQQKQVRVFRYITENTVE 596
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 597 ERIVERAEMKLRLDSIVI 614
>gi|332021363|gb|EGI61737.1| Chromatin-remodeling complex ATPase chain Iswi [Acromyrmex
echinatior]
Length = 1007
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 197/516 (38%), Positives = 286/516 (55%), Gaps = 74/516 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ EL+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 127 SGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHFRNIPGPHIVIV 186
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W++E K+ P L + +G+ E R R + + P +DV +
Sbjct: 187 PKSTLANWMNEFKKWCPTLRAVCLIGDAETRNTFIRDV------------MMPGEWDVCV 234
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++V+ ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 235 TSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTTNRLLLTGTPLQNN 293
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELW+L++F +P VF + + F S F +++S + E+ L +L F+LRR
Sbjct: 294 LHELWSLLNFLLPDVFNSSDDFDSWF----NTNSFLGDNSLVER---LHAVLRPFLLRRL 346
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K + VE G L P EI V +Q++ Y +L K+ L +L
Sbjct: 347 KSE-VEKG---LKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQ 402
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A GK+V+LD LL KL RVL+F+QMT+ L
Sbjct: 403 LRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRML 462
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R + Y RLDG+ E+R I ++ A G++ F+FM+STRA
Sbjct: 463 DILEDYCHWRCFQYCRLDGNTAHEDRQRQINEYN-----------APGSEKFIFMLSTRA 511
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V +TE+TVEE I+ RA
Sbjct: 512 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERA 571
Query: 479 ERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII 513
E KLRL V+ +VD ++TA+ D++ ++I
Sbjct: 572 EVKLRLDKLVIQQGRLVD---AKQTALNKDEMLNMI 604
>gi|221046276|dbj|BAH14815.1| unnamed protein product [Homo sapiens]
Length = 995
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 275/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 113 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 172
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 173 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 220
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R KN S L ++RE F RLL+T
Sbjct: 221 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRTKNEKSKLSEIVRE-FKTTNRLLLT 279
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 280 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 332
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 333 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 388
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 389 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 448
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 449 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 497
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 498 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 557
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 558 ERIVERAEMKLRLDSIVI 575
>gi|157427958|ref|NP_001098886.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Bos taurus]
gi|157279332|gb|AAI53226.1| SMARCA5 protein [Bos taurus]
Length = 1052
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 192/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+D+ +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDLCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>gi|119499890|ref|XP_001266702.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL
181]
gi|119414867|gb|EAW24805.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL
181]
Length = 1141
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 198/544 (36%), Positives = 292/544 (53%), Gaps = 81/544 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ E++ +QV GL+WL+ + G++ +L DEMGLGKTLQ ISFL YL+ GP LV
Sbjct: 213 IHGEMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYLRHVCGITGPHLVA 272
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E K+TP++ VL G++E+R + + E + ++ FDV
Sbjct: 273 VPKSTLDNWKREFHKWTPEVNVLVLQGDKEERHKL---INERLLDED---------FDVC 320
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++VL ++ L + W Y IIDEA R+KN S L ++R F RLL+TGTP+QN
Sbjct: 321 ITSYEMVLREKAHLKKFAWEYIIIDEAHRIKNEESSLAQIIR-VFNSRNRLLITGTPLQN 379
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VFG F D SS + + +Q L +L F+LRR
Sbjct: 380 NLHELWALLNFLLPDVFGDSEAF-----DQWFSSQDADQDTVVQQ---LHRVLRPFLLRR 431
Query: 273 TKQKLVECGHLMLP--------PLTEITVLQKKVYASILRKELPKLLALSS--------- 315
K + + +LP P++E+ V K Y IL K++ + +
Sbjct: 432 VKSDVEKS---LLPKKEVNLYVPMSEMQV---KWYQKILEKDIDAVNGAAGKRESKTRLL 485
Query: 316 -------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L A SGK+V+LD LL ++ G RVL+F+Q
Sbjct: 486 NIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNSGKMVILDKLLARMQQQGSRVLIFSQ 545
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R Y Y R+DG+ E+R AAI ++ G+D F+F+
Sbjct: 546 MSRVLDILEDYCVFRDYKYCRIDGTTAHEDRIAAIDEYN-----------KPGSDKFIFL 594
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VTE+ +EE
Sbjct: 595 LTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVFRFVTENAIEEK 654
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII--FGLHLFDPKAINNEESDD 531
++ RA +KLRL V+ ++VK A D+L +I ++F+ K +D
Sbjct: 655 VLERAAQKLRLDQLVIQQGRAQQQVK--NAASKDELLGMIQHGAANVFNTKGATGTLPND 712
Query: 532 LRLS 535
+LS
Sbjct: 713 KQLS 716
>gi|307211542|gb|EFN87620.1| Chromatin-remodeling complex ATPase chain Iswi [Harpegnathos
saltator]
Length = 1008
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 197/516 (38%), Positives = 286/516 (55%), Gaps = 74/516 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ EL+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 127 SGELRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFRSIPGPHIVIV 186
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W++E K+ P L + +G+ E R R + + P +DV +
Sbjct: 187 PKSTLANWMNEFKKWCPTLRAVCLIGDAETRNTFIRDV------------MMPGEWDVCV 234
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++V+ ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 235 TSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLLTGTPLQNN 293
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELW+L++F +P VF + + F S F +++S + E+ L +L F+LRR
Sbjct: 294 LHELWSLLNFLLPDVFNSSDDFDSWF----NTNSFLGDNSLVER---LHAVLRPFLLRRL 346
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K + VE G L P EI V +Q++ Y +L K+ L +L
Sbjct: 347 KSE-VEKG---LKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQ 402
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A GK+V+LD LL KL RVL+F+QMT+ L
Sbjct: 403 LRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLVFSQMTRML 462
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R + Y RLDG+ E+R I ++ A G++ F+FM+STRA
Sbjct: 463 DILEDYCHWRCFQYCRLDGNTAHEDRQRQINEYN-----------APGSEKFIFMLSTRA 511
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V +TE+TVEE I+ RA
Sbjct: 512 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERA 571
Query: 479 ERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII 513
E KLRL V+ +VD ++TA+ D++ ++I
Sbjct: 572 EVKLRLDKLVIQQGRLVD---AKQTALNKDEMLNMI 604
>gi|195116617|ref|XP_002002850.1| GI10771 [Drosophila mojavensis]
gi|193913425|gb|EDW12292.1| GI10771 [Drosophila mojavensis]
Length = 1908
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 206/540 (38%), Positives = 291/540 (53%), Gaps = 79/540 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPL 95
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PL
Sbjct: 541 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLY-GPFLCVVPL 599
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ + R I++ + Q L F+ +LTT
Sbjct: 600 STMTAWQREFDLWAPDMNVVTYLGDVKSRELIQQYEW-------QFEGSKRLKFNCILTT 652
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 653 YEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLK 711
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F T F + +A +G +T L L ++LRR K+
Sbjct: 712 ELWALLHFIMPEKFDTWENF------ELQHGNAEDKG-----YTRLHQQLEPYILRRVKK 760
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQK+ Y IL K L + N
Sbjct: 761 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCN 820
Query: 320 HQSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
H +L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+
Sbjct: 821 HAALIRPSEFELFGLQQDEALQVLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDV 880
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L D+L+ R +S++RLDGSI+ E R A+ HF+ A G+ F F++STRAGG
Sbjct: 881 LADYLQKRHFSFQRLDGSIKGEMRRQALDHFN-----------AEGSQDFCFLLSTRAGG 929
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++
Sbjct: 930 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 989
Query: 481 KLRLSHNVV------GDDVVDR----EVKERTAVETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ DDL +I+ FG LF + + EE
Sbjct: 990 KMVLDHLVIQRMDTTGRTVLDKSGSGHSSNSNPFNKDDLSAILKFGAEELFKDEQEHEEE 1049
>gi|198455729|ref|XP_001357539.2| GA21216 [Drosophila pseudoobscura pseudoobscura]
gi|198135371|gb|EAL24661.2| GA21216 [Drosophila pseudoobscura pseudoobscura]
Length = 1035
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 206/573 (35%), Positives = 305/573 (53%), Gaps = 88/573 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+ P
Sbjct: 135 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVP 194
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S WV+E K+ P L+ + +G+++ R R + + P +DV +T
Sbjct: 195 KSTLQNWVNEFKKWCPSLQAVCLIGDQDTRNTFIRDV------------LMPGEWDVCVT 242
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNNL
Sbjct: 243 SYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNNL 301
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + F F ++++ + T L +L F+LRR K
Sbjct: 302 HELWALLNFLLPDVFNSAEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRLK 354
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 355 SEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQL 410
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ LD
Sbjct: 411 RKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLD 470
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ + Y+Y RLDG E+R I+ ++++++ + FVFM+STRAG
Sbjct: 471 ILEDYCHWKNYNYCRLDGQTPHEDRNRQIQEYNMENSTK-----------FVFMLSTRAG 519
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RAE
Sbjct: 520 GLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAE 579
Query: 480 RKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKA--INNEESDDLRL 534
KLRL V+ G +VD + + D++ +II FG +F+ K I +E+ D +
Sbjct: 580 VKLRLDKMVIQGGRLVD---NRSSQINKDEMLNIIRFGASQVFNSKETDITDEDIDVILE 636
Query: 535 SG----------LNSMVEKVIAMRHEQVSGKAG 557
G L+SM E + +G+AG
Sbjct: 637 RGEAKTAEQKAQLDSMGESSLRTFTMDTNGEAG 669
>gi|355678659|gb|AER96176.1| chromodomain helicase DNA binding protein 2 [Mustela putorius furo]
Length = 1027
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 195/496 (39%), Positives = 280/496 (56%), Gaps = 70/496 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 468 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 527
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 528 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 580
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 581 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSHHRLLITGTPLQ 639
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKE---QFTSLKGILSAF 268
N+L ELW+L+HF MP F +F F++ GK +E Q + +L F
Sbjct: 640 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHIHKVLEPF 687
Query: 269 MLRRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR---------- 316
+LRR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 688 LLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIV 746
Query: 317 -----TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
NH L +N +SGKL++LD LL +L G+RVL+F+Q
Sbjct: 747 MELKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQ 806
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M + LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F+
Sbjct: 807 MVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFL 855
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE
Sbjct: 856 LSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEE 915
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA++K+ L H V+
Sbjct: 916 IIERAKKKMVLDHLVI 931
>gi|50551961|ref|XP_503455.1| YALI0E02332p [Yarrowia lipolytica]
gi|49649324|emb|CAG79034.1| YALI0E02332p [Yarrowia lipolytica CLIB122]
Length = 1028
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 197/543 (36%), Positives = 286/543 (52%), Gaps = 73/543 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ L+ +QV+GL+W++ Y G++ +L DEMGLGKTLQ ISFL YL++ + PGP LV
Sbjct: 151 IQGTLREYQVQGLNWMVSLYEHGLSGILADEMGLGKTLQTISFLGYLRYFRGIPGPHLVC 210
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E AK+TP++ VL G++E R Q + FDV
Sbjct: 211 VPKSTLDNWAREFAKWTPEVNVLVLQGDKEGR------------AQLIQDRLLTCDFDVC 258
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++VL ++G+L + W Y +IDEA R+KN S L ++R F RLL+TGTP+QN
Sbjct: 259 ITSYEMVLREKGYLRRFAWQYIVIDEAHRIKNEESSLSQIIR-LFHTENRLLITGTPLQN 317
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL+++ +P VF F + F + + G L IL F+LRR
Sbjct: 318 NLHELWALLNYILPDVFQDSAAFDAWFGE-------DQSGDQDAAVNQLHKILRPFLLRR 370
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K + + L P EI + +Q K Y IL K++ +LL +
Sbjct: 371 VKADVEKS----LLPKKEINLYVGMSDMQVKWYQKILEKDIDAVNGQIGKREGKTRLLNI 426
Query: 314 S---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NH L A +GK+V+LD LLK++ G RVL+F+QM+
Sbjct: 427 VMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNAGKMVILDKLLKRIQEQGSRVLIFSQMS 486
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ R Y Y R+DG E+R AI ++ + G++ FVF+++
Sbjct: 487 RVLDILEDYCLFRGYKYCRIDGQTAHEDRINAIDAYNKE-----------GSEKFVFLLT 535
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V +TE+ VEE ++
Sbjct: 536 TRAGGLGINLTTADQVVLYDSDWNPQADLQAMDRAHRIGQTKQVYVYRFITENAVEEKVI 595
Query: 476 RRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLH-LFDPKAINNEESDDLRL 534
RA +KLRL V+ +V + D L I FG +F+ +E DL +
Sbjct: 596 ERATQKLRLDKLVIQQGRSQSKVNNNAQNKDDLLNMIQFGAEKVFNRGKGEEQEEADLDI 655
Query: 535 SGL 537
+
Sbjct: 656 DDI 658
>gi|195148944|ref|XP_002015422.1| GL11075 [Drosophila persimilis]
gi|194109269|gb|EDW31312.1| GL11075 [Drosophila persimilis]
Length = 1033
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 206/573 (35%), Positives = 305/573 (53%), Gaps = 88/573 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+ P
Sbjct: 135 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVP 194
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S WV+E K+ P L+ + +G+++ R R + + P +DV +T
Sbjct: 195 KSTLQNWVNEFKKWCPSLQAVCLIGDQDTRNTFIRDV------------LMPGEWDVCVT 242
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNNL
Sbjct: 243 SYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNNL 301
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + F F ++++ + T L +L F+LRR K
Sbjct: 302 HELWALLNFLLPDVFNSAEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRLK 354
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 355 SEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQL 410
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ LD
Sbjct: 411 RKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLD 470
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ + Y+Y RLDG E+R I+ ++++++ + FVFM+STRAG
Sbjct: 471 ILEDYCHWKNYNYCRLDGQTPHEDRNRQIQEYNMENSTK-----------FVFMLSTRAG 519
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RAE
Sbjct: 520 GLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAE 579
Query: 480 RKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKA--INNEESDDLRL 534
KLRL V+ G +VD + + D++ +II FG +F+ K I +E+ D +
Sbjct: 580 VKLRLDKMVIQGGRLVD---NRSSQINKDEMLNIIRFGASQVFNSKETDITDEDIDVILE 636
Query: 535 SG----------LNSMVEKVIAMRHEQVSGKAG 557
G L+SM E + +G+AG
Sbjct: 637 RGEAKTAEQKAQLDSMGESSLRTFTMDTNGEAG 669
>gi|312074579|ref|XP_003140033.1| hypothetical protein LOAG_04448 [Loa loa]
Length = 1841
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 200/508 (39%), Positives = 283/508 (55%), Gaps = 74/508 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+EG++W++ + + +L DEMGLGKT+Q+ISFLS L G FLV+ PL
Sbjct: 503 ELRDYQLEGVNWMLHAWTKENSCILADEMGLGKTIQSISFLSVLYHKYQLYGTFLVVVPL 562
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLLT 154
S W E + P L V+ YVG+ R IR+ +Y + + L +V+LT
Sbjct: 563 STIASWQREFETWAPDLNVVTYVGDITSRDLIRQFELY--------VQSTKRLKVNVVLT 614
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+++L D+ FL W +DEA RLKN S+LY L E F RLL+TGTP+QN+L
Sbjct: 615 TYEILLKDKFFLGSFEWTVLTVDEAHRLKNDESLLYRSLFE-FTTNHRLLVTGTPLQNSL 673
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL+HF MP F + +F + D+ H + A SL L F+LRR K
Sbjct: 674 KELWALLHFIMPEKFDSWPEFEAEHHDSDHKTIA-----------SLHRKLQPFLLRRVK 722
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRK---ELPKLLALS----------- 314
+ + + LP E +T QK+ Y IL K EL K + S
Sbjct: 723 KDVEKS----LPAKVEQILRVDMTAQQKQYYKWILTKNYKELSKGVKGSINGFVNLVMEL 778
Query: 315 SRTANHQSLQNT-----------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH SL + +SGKL++LD LL +L +GHRVL+F+QM
Sbjct: 779 KKCCNHSSLVRSYDQPEEGADARLQQLLKSSGKLILLDKLLCRLQETGHRVLIFSQMVMM 838
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+Q++L+LR++ +RLDGS+R++ R AA+ HF+ ++ + F F++STR
Sbjct: 839 LDIMQEYLQLRRFPSQRLDGSMRSDLRKAALDHFNAPNSPD-----------FCFLLSTR 887
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V LVT+ +VEE I+ R
Sbjct: 888 AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQKKQVNIYRLVTKASVEEEIVER 947
Query: 478 AERKLRLSHNVVGD-DVVDREVKERTAV 504
A+RKL L H ++ D R V +T+
Sbjct: 948 AKRKLVLDHLIIQRMDTTGRTVLSKTSA 975
>gi|255947266|ref|XP_002564400.1| Pc22g03590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591417|emb|CAP97647.1| Pc22g03590 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1100
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 186/496 (37%), Positives = 277/496 (55%), Gaps = 77/496 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ EL+ +QV G++WL+ + G++ +L DEMGLGKTLQ ISFL YL++ + GP LV+
Sbjct: 188 IHGELRDYQVAGVNWLVSLHENGISGILADEMGLGKTLQTISFLGYLRYIRDINGPHLVV 247
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E AK+TP ++VL G +E+R+ + + E + E+ FDV
Sbjct: 248 VPKSTLDNWKREFAKWTPDIDVLVLQGNKEERQQL---INERLVEEE---------FDVC 295
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+++L ++ L + W Y IIDEA R+KN S L ++R F RLL+TGTP+QN
Sbjct: 296 ITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLSQIIR-LFNSRNRLLITGTPLQN 354
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VFG F F + A + +Q L +L F+LRR
Sbjct: 355 NLHELWALLNFLLPDVFGDSEAFDQWFSNQDSDQDA-----VVQQ---LHRVLRPFLLRR 406
Query: 273 TKQKLVECGHLMLP--------PLTEITVLQKKVYASILRKELPKLLALSS--------- 315
K + + +LP P++E +Q++ Y IL K++ + +
Sbjct: 407 VKSDVEKS---LLPKKELNLYVPMSE---MQRRWYQKILEKDIDAVNGAAGKRESKTRLL 460
Query: 316 -------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L A SGK+V+LD LLK++ G RVL+F+Q
Sbjct: 461 NIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMVILDKLLKRMQADGSRVLIFSQ 520
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R Y+Y R+DG+ E+R AAI ++ G+D FVF+
Sbjct: 521 MSRVLDILEDYCCFRDYNYCRIDGTTAHEDRIAAIDDYN-----------KPGSDKFVFL 569
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL +AD V+ ++ DWNPQ D QA+ RAHRIGQ V +TE +EE
Sbjct: 570 LTTRAGGLGINLTSADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFITEKAIEEK 629
Query: 474 IMRRAERKLRLSHNVV 489
++ RA +KLRL V+
Sbjct: 630 VLERAAQKLRLDQLVI 645
>gi|195058262|ref|XP_001995418.1| GH23147 [Drosophila grimshawi]
gi|193899624|gb|EDV98490.1| GH23147 [Drosophila grimshawi]
Length = 1025
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 208/573 (36%), Positives = 303/573 (52%), Gaps = 89/573 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+ P
Sbjct: 126 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVP 185
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S WV+E K+ P L + +G+++ R R + + P +DV +T
Sbjct: 186 KSTLQNWVNEFKKWCPSLHAVCLIGDQDTRNTFIRDV------------LLPGEWDVCVT 233
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNNL
Sbjct: 234 SYEMCIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNNL 292
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + F F ++++ + T L +L F+LRR K
Sbjct: 293 HELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---VTRLHAVLKPFLLRRLK 345
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 346 AEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQL 401
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ LD
Sbjct: 402 RKCTNHPYLFDGAEPGPPYTTDSHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLD 461
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y+Y RLDG E+R I+ F++ ++ + F+FM+STRAG
Sbjct: 462 ILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSTK-----------FLFMLSTRAG 510
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RAE
Sbjct: 511 GLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAE 570
Query: 480 RKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FGLH-LFDPKA--INNEESDDLRL 534
KLRL V+ G +VD R + D++ +II FG + +F K I +E+ D +
Sbjct: 571 VKLRLDKMVIQGGRLVD----NRAQLNKDEMLNIIRFGANQVFSSKETDITDEDIDVILE 626
Query: 535 SG----------LNSMVEKVIAMRHEQVSGKAG 557
G L+SM E + +G+AG
Sbjct: 627 RGEAKTAEQKAQLDSMGESSLRTFTMDTNGEAG 659
>gi|195380477|ref|XP_002048997.1| GJ21347 [Drosophila virilis]
gi|194143794|gb|EDW60190.1| GJ21347 [Drosophila virilis]
Length = 1021
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 282/518 (54%), Gaps = 76/518 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+ P
Sbjct: 126 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVP 185
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S WV+E K+ P L + +G+++ R R + + P +DV +T
Sbjct: 186 KSTLQNWVNEFKKWCPSLHAVCLIGDQDTRNTFIRDV------------LLPGDWDVCVT 233
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNNL
Sbjct: 234 SYEMCIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNNL 292
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + F F ++++ + T L +L F+LRR K
Sbjct: 293 HELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---VTRLHAVLKPFLLRRLK 345
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 346 AEVEK----RLKPKKELKIFVGLSKMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQL 401
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ LD
Sbjct: 402 RKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLD 461
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y+Y RLDG E+R I+ ++++++ + F+FM+STRAG
Sbjct: 462 ILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEYNMENSTK-----------FIFMLSTRAG 510
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RAE
Sbjct: 511 GLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAE 570
Query: 480 RKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FG 515
KLRL V+ G +VD R + D++ +II FG
Sbjct: 571 VKLRLDKMVIQGGRLVD----NRAQLNKDEMLNIIRFG 604
>gi|406862704|gb|EKD15753.1| chromodomain helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1538
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 199/508 (39%), Positives = 272/508 (53%), Gaps = 75/508 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+L+ Q+ GL++L + NV+L DEMGLGKT+Q +SF+++L+ + GPFLV+
Sbjct: 452 NGQLRDFQITGLNFLAYNWCKNKNVILADEMGLGKTVQTVSFMNWLRHDRKQEGPFLVVV 511
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
PL+ W ++P L + Y G +E RNI R YE + + NV F+VLL
Sbjct: 512 PLTTIPAWADTFEYWSPDLNYVVYNG-KESSRNIIRE-YELLSQ----GNVKKPKFNVLL 565
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y+ +L D FLSQI W + IDEA RLKN S LY L + F P RLL+TGTP+QN
Sbjct: 566 TSYEYILTDAAFLSQIKWQFLAIDEAHRLKNRESQLYQRLLD-FKAPSRLLITGTPVQNT 624
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L EL ALM F MP + T + A E+ +L + ++LRRT
Sbjct: 625 LGELSALMDFLMPGELDIEDDLDLTDEAA------------GEKIAALTNKIQPYILRRT 672
Query: 274 KQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELP------------------- 308
KQK+ LPP TE ++ +Q Y +IL +
Sbjct: 673 KQKVEND----LPPKTEKIIRVELSDVQLDYYKNILTRNYAALNEGGKGQKQSLLNIMME 728
Query: 309 ----------------KLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVLLFA 352
K+L S R +H +SGK+++LD LL KL HRVL+F+
Sbjct: 729 LKKASNHPYMFPNAEEKILKGSDRREDHLKGLIASSGKMMLLDQLLTKLKRDNHRVLIFS 788
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM + LDIL D+L+LR Y ++RLDG+I A R AI HF+ + G ND F F
Sbjct: 789 QMVRMLDILGDYLQLRGYQFQRLDGTIAAAPRRMAIDHFNAE----------GSND-FCF 837
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ TVEE
Sbjct: 838 LLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKKPVSIYRLVSKETVEE 897
Query: 473 VIMRRAERKLRLSHNVVGDDVVDREVKE 500
++ RA KL L + V D+E KE
Sbjct: 898 EVLERARNKLMLEFITIQRGVTDKEKKE 925
>gi|194855230|ref|XP_001968500.1| GG24470 [Drosophila erecta]
gi|190660367|gb|EDV57559.1| GG24470 [Drosophila erecta]
Length = 1886
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 214/585 (36%), Positives = 311/585 (53%), Gaps = 87/585 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPL 95
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PL
Sbjct: 528 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKLHHLY-GPFLCVVPL 586
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ + R I++ + Q L F+ +LTT
Sbjct: 587 STMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEW-------QFEGSKRLKFNCILTT 639
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 640 YEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLK 698
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F T + F V +A +G +T L L ++LRR K+
Sbjct: 699 ELWALLHFIMPDKFDTWDNF------EVQHGNAEDKG-----YTRLHQQLEPYILRRVKK 747
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQK+ Y IL K L + N
Sbjct: 748 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCN 807
Query: 320 HQSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
H +L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+
Sbjct: 808 HAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDV 867
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L D+L+ R + ++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG
Sbjct: 868 LADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGG 916
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++
Sbjct: 917 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 976
Query: 481 KLRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ ++ DDL +I+ FG LF + +E
Sbjct: 977 KMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFK----DEQE 1032
Query: 529 SDDLRLSGLNSMVEKVIAMRHEQVSGKAG---RKFEVNPVALLEE 570
DD + ++ ++ + R+E A F+V +A EE
Sbjct: 1033 HDDDLVCDIDEILRRA-ETRNEDPEMPADDLLSAFKVASIAAFEE 1076
>gi|322787688|gb|EFZ13700.1| hypothetical protein SINV_08345 [Solenopsis invicta]
Length = 1008
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/491 (38%), Positives = 272/491 (55%), Gaps = 70/491 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ EL+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 128 SGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHFRNIPGPHIVIV 187
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W++E K+ P L + +G+ E R R + + P +DV +
Sbjct: 188 PKSTLANWMNEFKKWCPSLRAVCLIGDAETRNTFIRDV------------MMPGEWDVCV 235
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++V+ ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 236 TSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTTNRLLLTGTPLQNN 294
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELW+L++F +P VF + + F S F +++S + E+ L +L F+LRR
Sbjct: 295 LHELWSLLNFLLPDVFNSSDDFDSWF----NTNSFLGDNSLVER---LHAVLRPFLLRRL 347
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K + VE G L P EI V +Q++ Y +L K+ L +L
Sbjct: 348 KSE-VEKG---LKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQ 403
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A GK+V+LD LL KL RVL+F+QMT+ L
Sbjct: 404 LRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRML 463
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R + Y RLDG+ E+R I ++ A G++ F+FM+STRA
Sbjct: 464 DILEDYCHWRCFQYCRLDGNTAHEDRQRQINEYN-----------APGSEKFIFMLSTRA 512
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V +TE+TVEE I+ RA
Sbjct: 513 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERA 572
Query: 479 ERKLRLSHNVV 489
E KLRL V+
Sbjct: 573 EVKLRLDKLVI 583
>gi|449018816|dbj|BAM82218.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a [Cyanidioschyzon merolae strain
10D]
Length = 1107
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 190/494 (38%), Positives = 280/494 (56%), Gaps = 67/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G+ ++P+Q+EGL+WL+R + G+N +L DEMGLGKTLQ I+ L++LK + GP LV
Sbjct: 145 GIRGTMRPYQIEGLNWLVRLHQHGINGILADEMGLGKTLQTIALLAFLKVYKGIRGPHLV 204
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ P S W E KF P V+R+ G++E+R + S + FDV
Sbjct: 205 IAPKSTLGNWNLEFEKFCPDFRVVRFHGDQEERARV------------AASQLIVNRFDV 252
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
+T+Y++ ++++ L + W Y IIDEA R+KN +SVL V+R + RLL+TGTP+Q
Sbjct: 253 CVTSYEIAILEKAVLRKFHWRYLIIDEAHRIKNENSVLSQVVR-MYNSQNRLLITGTPLQ 311
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NNL ELWAL++F +P VF + F + F+ ++ + ++ Q L +L F+LR
Sbjct: 312 NNLHELWALLNFLLPDVFSSSEDFDAWFEQVEGTTEEDAKAEMVRQ---LHAVLRPFLLR 368
Query: 272 RTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKE-------------LPKLLA 312
R K ++ LPP E +T +Q ++Y S+L+K+ L +L
Sbjct: 369 RLKSEVAR----ELPPKKERIVFVRLTKMQHELYRSLLKKDVDAISGQGGDRARLLNILM 424
Query: 313 LSSRTANHQSLQNTAS-------GKLVVLD--------LLLKKLYNSGHRVLLFAQMTQT 357
+ NH L G+ VV + LL +L GHRVL+F+QMT+
Sbjct: 425 QLRKCCNHPYLFEGVEDRTLDPFGEHVVQNSAKLALLDKLLPRLRAEGHRVLIFSQMTRM 484
Query: 358 LDILQDFL--ELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
LDIL+D+ ++R Y Y R+DGS +E R I F+ A G+D F+F++S
Sbjct: 485 LDILEDYCCEQMRGYPYCRIDGSTDSETRERMIEEFN-----------AEGSDKFIFLLS 533
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTVI Y+ DWNPQVD QA+ RAHRIGQ V + L+ E TVEE I+
Sbjct: 534 TRAGGLGINLASADTVILYDSDWNPQVDLQAMDRAHRIGQKRPVTVLRLICESTVEERIL 593
Query: 476 RRAERKLRLSHNVV 489
RRA KL++ + V+
Sbjct: 594 RRALMKLKIDNMVI 607
>gi|385302379|gb|EIF46512.1| chromatin remodelling complex atpase chain isw1 [Dekkera
bruxellensis AWRI1499]
Length = 1053
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 193/508 (37%), Positives = 279/508 (54%), Gaps = 66/508 (12%)
Query: 16 DNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISF 75
+ DE D T + + + L+ +Q+ GL+WLI Y ++ +L DEMGLGKTLQ ISF
Sbjct: 112 EEDEGDACTVLTESPSYIHGTLRDYQIAGLNWLISLYENRLSGILADEMGLGKTLQTISF 171
Query: 76 LSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV 135
L +L++ + GPFL++ P S D W E K+TP + VL G +E+R ++ +
Sbjct: 172 LGWLRYYRGIDGPFLIIVPKSTLDNWRREFNKWTPDVNVLVLQGNKEEREDL-------I 224
Query: 136 KEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE 195
K++ N FD +T+Y++V+ ++ L + W Y IIDEA R+KN S L ++R
Sbjct: 225 KDKLMQCN-----FDACVTSYEMVIREKSKLGKFRWEYIIIDEAHRIKNEQSSLSQIIR- 278
Query: 196 HFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIK 255
F RLL+TGTP+QNNL ELWAL++F +P VFG F F+ ++
Sbjct: 279 VFYSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDDQLFDEWFESEGQTNQ-------D 331
Query: 256 EQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL----- 307
+ L ILS F+LRR K VE L L +T +Q K Y +L K++
Sbjct: 332 DLVKQLHKILSPFLLRRVKSD-VETSLLPKKELNVYVGMTAMQIKWYRKLLEKDIDAVNG 390
Query: 308 --------PKLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKL 341
+LL + + NH L A SGK++VLD LLKK+
Sbjct: 391 VLGKREGKTRLLNIMMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNSGKMIVLDKLLKKM 450
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+ G RVL+F+QM++ LDIL+D+ R Y+Y R+DGS EER AI ++
Sbjct: 451 KSEGSRVLIFSQMSRLLDILEDYCYFRGYNYCRIDGSTPHEERIKAIDDYN--------- 501
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
+ +D F+F+++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V
Sbjct: 502 --SPNSDKFIFLLTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVKV 559
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV 489
LVTE+ +EE ++ RA +KLRL V+
Sbjct: 560 FRLVTENAIEEKVLERATQKLRLDQLVI 587
>gi|115389802|ref|XP_001212406.1| chromatin remodelling complex ATPase chain ISW1 [Aspergillus
terreus NIH2624]
gi|114194802|gb|EAU36502.1| chromatin remodelling complex ATPase chain ISW1 [Aspergillus
terreus NIH2624]
Length = 1119
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 187/496 (37%), Positives = 275/496 (55%), Gaps = 77/496 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V E++ +Q+ GL+WL+ + G++ +L DEMGLGKTLQ ISFL YL+ PGP LV
Sbjct: 188 VNGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYLRHVCDIPGPHLVA 247
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E K+TP++ VL G++E+R + + E + ++ FDV
Sbjct: 248 VPKSTLDNWKREFQKWTPEVNVLVLQGDKEERHKL---INERLLDED---------FDVC 295
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++VL ++ L + W Y IIDEA R+KN S L ++R F RLL+TGTP+QN
Sbjct: 296 ITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLSQIIR-VFHSRNRLLITGTPLQN 354
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VFG F D SS + + +Q L +L F+LRR
Sbjct: 355 NLHELWALLNFLLPDVFGDSEAF-----DQWFSSQDSDQDTVVQQ---LHRVLRPFLLRR 406
Query: 273 TKQKLVECGHLMLP--------PLTEITVLQKKVYASILRKELPKLLALSS--------- 315
K + + +LP P++E+ V K Y IL K++ + +
Sbjct: 407 VKSDVEKS---LLPKKEVNLYVPMSEMQV---KWYQKILEKDIDAVNGAAGKRESKTRLL 460
Query: 316 -------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L A +GK+V+LD LL ++ G RVL+F+Q
Sbjct: 461 NIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNAGKMVILDKLLSRMQKQGSRVLIFSQ 520
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R+Y+Y R+DG+ E+R AAI ++ G+D F+F+
Sbjct: 521 MSRVLDILEDYCVFREYNYCRIDGTTAHEDRIAAIDDYN-----------RPGSDKFIFL 569
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VTE+ +EE
Sbjct: 570 LTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVFRFVTENAIEEK 629
Query: 474 IMRRAERKLRLSHNVV 489
++ RA +KLRL V+
Sbjct: 630 VLERAAQKLRLDQLVI 645
>gi|134114696|ref|XP_774056.1| hypothetical protein CNBH1020 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256686|gb|EAL19409.1| hypothetical protein CNBH1020 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1514
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 197/510 (38%), Positives = 279/510 (54%), Gaps = 71/510 (13%)
Query: 16 DNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISF 75
DN + P + LKP Q+ GL+WL + G N +L DEMGLGKT+Q++SF
Sbjct: 431 DNRPTYQKIPENPPYLACGGALKPFQLTGLNWLAYVWSKGENGILADEMGLGKTVQSVSF 490
Query: 76 LSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV 135
LSYL Q GPFLV+ PLS W ++ ++ P+L V+ Y+G R IR
Sbjct: 491 LSYLFHVQHQYGPFLVVVPLSTISAWQAQFKRWAPELNVICYMGSARSRDVIR------- 543
Query: 136 KEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE 195
Q + + L F+VLLTTY+ +L D+ L QI W +DEA RLKN S LY L+
Sbjct: 544 --QFEFGPLKNLKFNVLLTTYEFILKDRQDLQQIKWQVLAVDEAHRLKNHESQLYEALKS 601
Query: 196 HFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIK 255
F +LL+TGTP+QNN+ EL ALMHF MP F N F ++ +S + KIK
Sbjct: 602 -FWSASKLLITGTPLQNNVKELLALMHFLMPEKFQLANDF------DLNDASEDQGAKIK 654
Query: 256 EQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPK 309
+ L L+ MLRR K+ +V+ LP + E++ +Q Y +IL K
Sbjct: 655 D----LHDKLTTLMLRRLKKDVVK----ELPTKSERILRVEMSAMQTHYYKNILTKNFAV 706
Query: 310 L------------LALS-SRTANHQSLQNTA-----------------SGKLVVLDLLLK 339
L +A+ + +NH L A SGK+V LD+LL
Sbjct: 707 LSKGGTQQVSLMNVAMELKKASNHPYLFEGAEDRSKPANEILRGLVMNSGKMVCLDMLLS 766
Query: 340 KLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIER 399
+L + GHRVL+F+QM + LDI+ D++ R Y ++RLDG++ ++ R +I HF+
Sbjct: 767 RLKSDGHRVLIFSQMVRLLDIISDYMTARGYVHQRLDGTVPSDVRKKSIEHFN------- 819
Query: 400 LYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV 459
A G+ F F++STRAGG+G+NL ADTVI ++ D+NPQ D QA+ RAHRIGQ HV
Sbjct: 820 ----APGSPDFAFLLSTRAGGLGINLETADTVIIFDSDYNPQNDLQAMARAHRIGQQRHV 875
Query: 460 LSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
LV++ T+EE I+ RA RK+ L + ++
Sbjct: 876 SIFRLVSKGTIEEDILERAMRKMLLEYAII 905
>gi|255719682|ref|XP_002556121.1| KLTH0H05566p [Lachancea thermotolerans]
gi|238942087|emb|CAR30259.1| KLTH0H05566p [Lachancea thermotolerans CBS 6340]
Length = 1106
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 189/506 (37%), Positives = 281/506 (55%), Gaps = 70/506 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++GL+WL+ + + +L DEMGLGKTLQ ISF+ Y+++ + GPF+V+
Sbjct: 132 VNGQLRPYQIQGLNWLVSLHQSNLAGILADEMGLGKTLQTISFIGYMRYVEKKRGPFVVI 191
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSN-VSPLPFDV 151
P S + W+ E+ ++TP++ G++E+R + +SN + FD+
Sbjct: 192 APKSTLNNWLREINRWTPEVNAFILQGDKEERAKL-------------VSNKLMACDFDI 238
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
++ +Y++++ ++ +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+Q
Sbjct: 239 VVASYEIIIKEKSSFKKIDWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQ 297
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NNL ELWAL++F +P VF F F SS +G I +Q L +L F+LR
Sbjct: 298 NNLHELWALLNFLLPDVFSDSQAFDDWFS---SESSEEDKGTIVKQ---LHTVLQPFLLR 351
Query: 272 RTKQKLVECGHLMLPPLT---EITVLQKKVYASILRKELPKLLALSS------------- 315
R K + VE L L ++ +QK+ Y IL K+L + +
Sbjct: 352 RLKNE-VETSLLPKKELNLYIGMSAMQKRWYKQILEKDLDAVNGANGSKESKTRLLNIMM 410
Query: 316 ---RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A S KL VLD LL+K G RVL+F+QM++
Sbjct: 411 QLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSAKLKVLDKLLRKFKEEGSRVLIFSQMSRL 470
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+++TR
Sbjct: 471 LDILEDYCFFRNYEYCRIDGSTAHEDRIEAIDEYN-----------APDSKKFVFLLTTR 519
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+ R
Sbjct: 520 AGGLGINLTTADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILER 579
Query: 478 AERKLRLSHNVVG---DDVVDREVKE 500
A +KLRL V+ + V ++E K+
Sbjct: 580 ATQKLRLDQLVIQQSRNGVANKEAKK 605
>gi|301604374|ref|XP_002931866.1| PREDICTED: probable global transcription activator SNF2L1 [Xenopus
(Silurana) tropicalis]
Length = 1029
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/488 (39%), Positives = 270/488 (55%), Gaps = 70/488 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +QV GL+W+I Y G+N +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 155 LRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 214
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L + +G++ R R + + P +DV +T+Y
Sbjct: 215 TLHNWMNEFKRWIPSLCAVCLIGDKNARAAFIRDV------------MMPGEWDVCVTSY 262
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 263 EMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNLHE 321
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P VF + F S F +++ K+ E+ L +L F+LRR K +
Sbjct: 322 LWALLNFLLPDVFNSAEDFDSWF----DTNNCLGDQKLVER---LHAVLKPFLLRRIKAE 374
Query: 277 LVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALSSR 316
+ + LPP E+ + +Q++ Y IL K+ L +L +
Sbjct: 375 VEKS----LPPKKEVKIYLGLGKMQREWYTKILMKDIDILNSAGKMDKMRLLNILMQLRK 430
Query: 317 TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L + A SGK+VVLD LL K G RVL+F+QMT+ LDIL
Sbjct: 431 CCNHPYLFDGAEPGPPYTTDTHLVYNSGKMVVLDKLLPKFKEQGSRVLIFSQMTRVLDIL 490
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D+ R Y Y RLDG E+R AAI F+ + + F+FM+STRAGG+
Sbjct: 491 EDYCMWRGYEYCRLDGQTPHEQREAAIETFN-----------SPNSSKFIFMLSTRAGGL 539
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE K
Sbjct: 540 GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKTVRVFRLITDNTVEERIVERAEIK 599
Query: 482 LRLSHNVV 489
LRL V+
Sbjct: 600 LRLDSIVI 607
>gi|17137266|ref|NP_477197.1| Chromodomain-helicase-DNA-binding protein 1, isoform A [Drosophila
melanogaster]
gi|75009913|sp|Q7KU24.1|CHD1_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein 1;
Short=CHD-1; AltName: Full=ATP-dependent helicase Chd1
gi|7295870|gb|AAF51170.1| Chromodomain-helicase-DNA-binding protein 1, isoform A [Drosophila
melanogaster]
Length = 1883
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 217/585 (37%), Positives = 313/585 (53%), Gaps = 87/585 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPL 95
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PL
Sbjct: 528 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLY-GPFLCVVPL 586
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ + R I++ YE E S+ L F+ +LTT
Sbjct: 587 STMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQ--YEWQFESSKR-----LKFNCILTT 639
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 640 YEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLK 698
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F T F V +A +G +T L L ++LRR K+
Sbjct: 699 ELWALLHFIMPDKFDTWENF------EVQHGNAEDKG-----YTRLHQQLEPYILRRVKK 747
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQK+ Y IL K L + N
Sbjct: 748 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCN 807
Query: 320 HQSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
H +L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+
Sbjct: 808 HAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDV 867
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L D+L+ R + ++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG
Sbjct: 868 LADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGG 916
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++
Sbjct: 917 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 976
Query: 481 KLRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ ++ DDL +I+ FG LF + +E
Sbjct: 977 KMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFK----DEQE 1032
Query: 529 SDDLRLSGLNSMVEKVIAMRHEQVSGKAG---RKFEVNPVALLEE 570
DD + ++ ++ + R+E A F+V +A EE
Sbjct: 1033 HDDDLVCDIDEILRRA-ETRNEDPEMPADDLLSAFKVASIAAFEE 1076
>gi|384252115|gb|EIE25592.1| hypothetical protein COCSUDRAFT_46779 [Coccomyxa subellipsoidea
C-169]
Length = 1022
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 196/529 (37%), Positives = 295/529 (55%), Gaps = 73/529 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +Q++GL+WLI Y G+N +L DEMGLGKTLQ IS L YL+ + GP +V+ P S
Sbjct: 146 MREYQMQGLNWLIHLYDNGINGILADEMGLGKTLQTISLLGYLQEYRGIHGPHMVIVPKS 205
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E K+ P + +++ G +E+R + +EQ+ V+ FDV++T+Y
Sbjct: 206 TLHNWINEFRKWCPSIRAVKFHGNQEER--------AYQREQT----VAVGKFDVVVTSY 253
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y IIDEA R+KN +S+L V+R F RLL+TGTP+QNNL E
Sbjct: 254 EMVIKEKNHFKKFHWRYIIIDEAHRIKNENSILSRVVRT-FKTNYRLLITGTPLQNNLHE 312
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P VF + +F F S A E + L +L F+LRR K
Sbjct: 313 LWALLNFLLPEVFSSAEKFDEWFNVQDKDSEA-------EVVSQLHKVLRPFLLRRLKSD 365
Query: 277 LVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRT------------A 318
VE G LPP E ++ +QKK YA++L+K++ + + R+
Sbjct: 366 -VEKG---LPPKKETILKIGMSEMQKKFYAALLQKDIDAINGGADRSRLLNIVMQLRKCC 421
Query: 319 NHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQD 363
NH L A SGKLV+LD LL KL + RVL+F+QMT+ LDIL+D
Sbjct: 422 NHPYLFQGAEPGPPYTTGEHLVENSGKLVLLDKLLPKLQSRDSRVLIFSQMTRLLDILED 481
Query: 364 FLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGL 423
+ R Y Y R+DG+ E+R + I F+ + G++ F+F++STRAGG+G+
Sbjct: 482 YCLYRGYKYCRIDGNTSGEDRESQIDGFNAE-----------GSEKFIFLLSTRAGGLGI 530
Query: 424 NLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLR 483
NL AD V+ ++ DWNPQ+D QA+ RAHRIGQ V E+++EE ++ +A +KLR
Sbjct: 531 NLYTADIVVLFDSDWNPQMDLQAMDRAHRIGQKKEVQVFRFCVENSIEEKVIEKAYKKLR 590
Query: 484 LSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPKAINNEESD 530
L V+ + K V DDL S++ +G + F +A N + D
Sbjct: 591 LDALVIQQGRLTENTK---TVNKDDLLSMVRYGAEMVFSSEAANITDQD 636
>gi|320581684|gb|EFW95903.1| Nucleosome remodeling factor [Ogataea parapolymorpha DL-1]
Length = 1384
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 201/518 (38%), Positives = 287/518 (55%), Gaps = 76/518 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q +SFLS+L +++ GP L
Sbjct: 355 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPHL 414
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W K+ P + V+ Y+G + R+ IR YE N + F+
Sbjct: 415 VVVPLSTVPAWQETFDKWAPDVNVIYYMGNTKSRKAIRD--YEFY----VGGNRKKVKFN 468
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLTTY+ +L D+ L W Y +DEA RLKN S LY L E F + RLL+TGTP+
Sbjct: 469 VLLTTYEYILKDRAELGSFKWQYLAVDEAHRLKNAESSLYESLSE-FKVANRLLITGTPL 527
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL AL +F MP F ++Q + + +A G IK +L+ + F+L
Sbjct: 528 QNNLKELAALCNFLMPGKF-QIDQEID-----FDTPNAEAEGYIK----ALQAEIKPFIL 577
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKE--------------LPKL 310
RR K K VE LP T E++ +Q + Y +IL K L +
Sbjct: 578 RRLK-KDVETS---LPGKTERILRVELSDIQTEYYKNILTKNYGALNQGPRGSQISLLNI 633
Query: 311 LALSSRTANH-----------------QSLQNT------ASGKLVVLDLLLKKLYNSGHR 347
+A + +NH S +N +SGK+V+LD LL KL+ GHR
Sbjct: 634 MAELKKASNHPYLFDGVEEHVLAKVGSHSRENILKGLIMSSGKMVLLDQLLNKLHRDGHR 693
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDI+ D+L+L+ +S++RLDG+I + +R AI HF+ A G+
Sbjct: 694 VLIFSQMVRILDIIGDYLQLKGHSFQRLDGTISSHKRRLAIDHFN-----------AEGS 742
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ V++
Sbjct: 743 KDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSK 802
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVE 505
TVEE ++ RA RK+ L + ++ + D K +T E
Sbjct: 803 DTVEEQVLERARRKMILEYAIISLGITDNN-KSKTKAE 839
>gi|194380928|dbj|BAG64032.1| unnamed protein product [Homo sapiens]
Length = 995
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 113 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 172
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 173 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 220
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 221 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 279
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QN+L ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 280 GTPLQNSLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 332
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 333 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 388
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 389 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 448
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 449 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 497
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 498 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 557
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 558 ERIVERAEMKLRLDSIVI 575
>gi|442625623|ref|NP_001259975.1| Chromodomain-helicase-DNA-binding protein 1, isoform C [Drosophila
melanogaster]
gi|440213244|gb|AGB92512.1| Chromodomain-helicase-DNA-binding protein 1, isoform C [Drosophila
melanogaster]
Length = 1881
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 217/585 (37%), Positives = 313/585 (53%), Gaps = 87/585 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPL 95
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PL
Sbjct: 528 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLY-GPFLCVVPL 586
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ + R I++ YE E S+ L F+ +LTT
Sbjct: 587 STMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQ--YEWQFESSKR-----LKFNCILTT 639
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 640 YEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLK 698
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F T F V +A +G +T L L ++LRR K+
Sbjct: 699 ELWALLHFIMPDKFDTWENF------EVQHGNAEDKG-----YTRLHQQLEPYILRRVKK 747
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQK+ Y IL K L + N
Sbjct: 748 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCN 807
Query: 320 HQSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
H +L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+
Sbjct: 808 HAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDV 867
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L D+L+ R + ++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG
Sbjct: 868 LADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGG 916
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++
Sbjct: 917 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 976
Query: 481 KLRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ ++ DDL +I+ FG LF + +E
Sbjct: 977 KMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFK----DEQE 1032
Query: 529 SDDLRLSGLNSMVEKVIAMRHEQVSGKAG---RKFEVNPVALLEE 570
DD + ++ ++ + R+E A F+V +A EE
Sbjct: 1033 HDDDLVCDIDEILRRA-ETRNEDPEMPADDLLSAFKVASIAAFEE 1076
>gi|386769008|ref|NP_001245851.1| Chromodomain-helicase-DNA-binding protein 1, isoform B [Drosophila
melanogaster]
gi|383291295|gb|AFH03528.1| Chromodomain-helicase-DNA-binding protein 1, isoform B [Drosophila
melanogaster]
Length = 1900
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 217/585 (37%), Positives = 313/585 (53%), Gaps = 87/585 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPL 95
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PL
Sbjct: 545 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLY-GPFLCVVPL 603
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ + R I++ YE E S+ L F+ +LTT
Sbjct: 604 STMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQ--YEWQFESSKR-----LKFNCILTT 656
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 657 YEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLK 715
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F T F V +A +G +T L L ++LRR K+
Sbjct: 716 ELWALLHFIMPDKFDTWENF------EVQHGNAEDKG-----YTRLHQQLEPYILRRVKK 764
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQK+ Y IL K L + N
Sbjct: 765 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCN 824
Query: 320 HQSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
H +L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+
Sbjct: 825 HAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDV 884
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L D+L+ R + ++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG
Sbjct: 885 LADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGG 933
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++
Sbjct: 934 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 993
Query: 481 KLRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ ++ DDL +I+ FG LF + +E
Sbjct: 994 KMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFK----DEQE 1049
Query: 529 SDDLRLSGLNSMVEKVIAMRHEQVSGKAG---RKFEVNPVALLEE 570
DD + ++ ++ + R+E A F+V +A EE
Sbjct: 1050 HDDDLVCDIDEILRRA-ETRNEDPEMPADDLLSAFKVASIAAFEE 1093
>gi|367005456|ref|XP_003687460.1| hypothetical protein TPHA_0J02060 [Tetrapisispora phaffii CBS 4417]
gi|357525764|emb|CCE65026.1| hypothetical protein TPHA_0J02060 [Tetrapisispora phaffii CBS 4417]
Length = 1075
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/544 (35%), Positives = 295/544 (54%), Gaps = 83/544 (15%)
Query: 16 DNDERDGQTPVDAAEFG-------VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGK 68
D DE D + +D EF V L+P+Q++G++WLI Y G++ +L DEMGLGK
Sbjct: 97 DIDEEDNEA-LDDVEFQFRESPSYVDGTLRPYQIQGINWLISLYKSGLSGILADEMGLGK 155
Query: 69 TLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIR 128
TLQ I+FL YL++ + PGP+LV+ P S + W+ E+ K+TP++ G++E+R +
Sbjct: 156 TLQTIAFLGYLRYIEKKPGPYLVIAPKSTLNNWLREINKWTPEVNAFILQGDKEERAGLI 215
Query: 129 RTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSV 188
+ + FD+++++Y++++ ++ +I W Y +IDEA R+KN S+
Sbjct: 216 Q------------KKLVGCDFDIVVSSYEIIIREKSAFRKIDWEYIVIDEAHRIKNEESM 263
Query: 189 LYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSA 248
L VLRE F R+L+TGTP+QNNL ELWAL++F +P +F F F + S
Sbjct: 264 LSQVLRE-FKSRNRMLITGTPLQNNLHELWALLNFLLPDIFSNAQDFDDWFS---NEGSE 319
Query: 249 PKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASI 302
+ K+ +Q L +L F+LRR K ++ L P E+ V +QKK Y I
Sbjct: 320 DDQDKVVKQ---LHTVLQPFLLRRIKSEV----ETSLLPKKELNVYVGMSTMQKKWYKQI 372
Query: 303 LRKELPKLLALSS----------------RTANHQSLQNTAS-GKLVVLDLLLKKLYNS- 344
L K++ + A S + NH L + A G D L +YNS
Sbjct: 373 LEKDIDAVNASSGNKESKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHL--VYNSA 430
Query: 345 ---------------GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIR 389
G RVL+F+QM++ LDI++D+ R Y+Y R+DGS E+R AI
Sbjct: 431 KLKVLDKLLKKFKEEGSRVLIFSQMSRLLDIMEDYCYFRNYNYCRIDGSTAHEDRIQAID 490
Query: 390 HFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQR 449
++ A +D F+F+++TRAGG+G+NL +AD VI ++ DWNPQ D QA+ R
Sbjct: 491 DYN-----------APDSDKFLFLLTTRAGGLGINLTSADVVILFDSDWNPQADLQAMDR 539
Query: 450 AHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDL 509
AHRIGQ V LVT+++VEE I+ RA +KLRL V+ + + KE + D L
Sbjct: 540 AHRIGQKKQVKVFRLVTDNSVEEKIIERATQKLRLDKLVIQQNRSGAKKKESQGDQKDAL 599
Query: 510 RSII 513
S+I
Sbjct: 600 LSMI 603
>gi|195470933|ref|XP_002087761.1| GE14968 [Drosophila yakuba]
gi|194173862|gb|EDW87473.1| GE14968 [Drosophila yakuba]
Length = 1883
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 214/585 (36%), Positives = 310/585 (52%), Gaps = 87/585 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPL 95
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PL
Sbjct: 527 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKLHHLY-GPFLCVVPL 585
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ + R I++ + Q L F+ +LTT
Sbjct: 586 STMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEW-------QFEGSKRLKFNCILTT 638
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 639 YEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLK 697
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F T F V +A +G +T L L ++LRR K+
Sbjct: 698 ELWALLHFIMPDKFDTWENF------EVQHGNAEDKG-----YTRLHQQLEPYILRRVKK 746
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQK+ Y IL K L + N
Sbjct: 747 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCN 806
Query: 320 HQSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
H +L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+
Sbjct: 807 HAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDV 866
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L D+L+ R + ++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG
Sbjct: 867 LADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGG 915
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++
Sbjct: 916 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 975
Query: 481 KLRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ ++ DDL +I+ FG LF + +E
Sbjct: 976 KMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFK----DEQE 1031
Query: 529 SDDLRLSGLNSMVEKVIAMRHEQVSGKAG---RKFEVNPVALLEE 570
DD + ++ ++ + R+E A F+V +A EE
Sbjct: 1032 HDDDLVCDIDEILRRA-ETRNEDPEMPADDLLSAFKVASIAAFEE 1075
>gi|58271342|ref|XP_572827.1| transcription regulator [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229086|gb|AAW45520.1| transcription regulator, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1519
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/510 (38%), Positives = 279/510 (54%), Gaps = 71/510 (13%)
Query: 16 DNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISF 75
DN + P + LKP Q+ GL+WL + G N +L DEMGLGKT+Q++SF
Sbjct: 436 DNRPTYQKIPENPPYLACGGALKPFQLTGLNWLAYVWSKGENGILADEMGLGKTVQSVSF 495
Query: 76 LSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV 135
LSYL Q GPFLV+ PLS W ++ ++ P+L V+ Y+G R IR
Sbjct: 496 LSYLFHVQHQYGPFLVVVPLSTISAWQAQFKRWAPELNVICYMGSARSRDVIR------- 548
Query: 136 KEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE 195
Q + + L F+VLLTTY+ +L D+ L QI W +DEA RLKN S LY L+
Sbjct: 549 --QFEFGPLKNLKFNVLLTTYEFILKDRQDLQQIKWQVLAVDEAHRLKNHESQLYEALKS 606
Query: 196 HFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIK 255
F +LL+TGTP+QNN+ EL ALMHF MP F N F ++ +S + KIK
Sbjct: 607 -FWSASKLLITGTPLQNNVKELLALMHFLMPEKFQLANDF------DLNDASEDQGAKIK 659
Query: 256 EQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPK 309
+ L L+ MLRR K+ +V+ LP + E++ +Q Y +IL K
Sbjct: 660 D----LHDKLTTLMLRRLKKDVVK----ELPTKSERILRVEMSAMQTHYYKNILTKNFAV 711
Query: 310 L------------LALS-SRTANHQSLQNTA-----------------SGKLVVLDLLLK 339
L +A+ + +NH L A SGK+V LD+LL
Sbjct: 712 LSKGGTQQVSLMNVAMELKKASNHPYLFEGAEDRSKPANEILRGLVMNSGKMVCLDMLLS 771
Query: 340 KLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIER 399
+L + GHRVL+F+QM + LDI+ D++ R Y ++RLDG++ ++ R +I HF+
Sbjct: 772 RLKSDGHRVLIFSQMVRLLDIISDYMTARGYVHQRLDGTVPSDVRKKSIEHFN------- 824
Query: 400 LYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV 459
A G+ F F++STRAGG+G+NL ADTVI ++ D+NPQ D QA+ RAHRIGQ HV
Sbjct: 825 ----APGSPDFAFLLSTRAGGLGINLETADTVIIFDSDYNPQNDLQAMARAHRIGQQRHV 880
Query: 460 LSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
LV++ T+EE I+ RA RK+ L + ++
Sbjct: 881 SIFRLVSKGTIEEDILERAMRKMLLEYAII 910
>gi|405122403|gb|AFR97170.1| transcription regulator [Cryptococcus neoformans var. grubii H99]
Length = 1523
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/489 (39%), Positives = 273/489 (55%), Gaps = 71/489 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LKP Q+ GL+WL + G N +L DEMGLGKT+Q++SFLSYL Q GPFLV+ PLS
Sbjct: 458 LKPFQLTGLNWLAYVWSKGENGILADEMGLGKTVQSVSFLSYLFHVQHQYGPFLVVVPLS 517
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W ++ K+ P L V+ Y+G R IR Q + + L F+VLLTTY
Sbjct: 518 TISAWQAQFKKWAPDLNVICYMGSARSRDVIR---------QFEFGPLKNLKFNVLLTTY 568
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ +L D+ L QI W +DEA RLKN S LY L+ F +LL+TGTP+QNN+ E
Sbjct: 569 EFILKDRQDLQQIKWQVLAVDEAHRLKNHESQLYEALKS-FWSASKLLITGTPLQNNVKE 627
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
L ALMHF MP F N F ++ +S + KIK+ L L+ MLRR K+
Sbjct: 628 LLALMHFLMPEKFQLANDF------DLNDASEDQGAKIKD----LHDKLTTLMLRRLKKD 677
Query: 277 LVECGHLMLPPLT------EITVLQKKVYASILRKELPKL------------LALS-SRT 317
+V+ LP + E++ +Q Y +IL K L +A+ +
Sbjct: 678 VVK----ELPTKSERILRVEMSAMQTHYYKNILTKNFAVLSKGGTQQVSLMNVAMELKKA 733
Query: 318 ANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
+NH L A SGK+V LD+LL +L + GHRVL+F+QM + LDI
Sbjct: 734 SNHPYLFEGAEDRNKPANEILRGLVMNSGKMVCLDMLLSRLKSDGHRVLIFSQMVRLLDI 793
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
+ D++ R Y ++RLDG++ ++ R +I HF+ A G+ F F++STRAGG
Sbjct: 794 ISDYMTARGYVHQRLDGTVPSDVRKKSIEHFN-----------APGSPDFAFLLSTRAGG 842
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ D+NPQ D QA+ RAHRIGQ HV LV++ T+EE I+ RA R
Sbjct: 843 LGINLETADTVIIFDSDYNPQNDLQAMARAHRIGQQRHVSIFRLVSKGTIEEDILERAMR 902
Query: 481 KLRLSHNVV 489
K+ L + ++
Sbjct: 903 KMLLEYAII 911
>gi|195124267|ref|XP_002006615.1| GI18485 [Drosophila mojavensis]
gi|193911683|gb|EDW10550.1| GI18485 [Drosophila mojavensis]
Length = 1020
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 194/518 (37%), Positives = 282/518 (54%), Gaps = 76/518 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+ P
Sbjct: 125 GEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVP 184
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S WV+E K+ P L + +G+++ R R + + P +DV +T
Sbjct: 185 KSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDV------------LLPGEWDVCVT 232
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNNL
Sbjct: 233 SYEMCIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNNL 291
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + F F ++++ + T L +L F+LRR K
Sbjct: 292 HELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---VTRLHAVLKPFLLRRLK 344
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 345 AEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQL 400
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ LD
Sbjct: 401 RKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLD 460
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y+Y RLDG E+R I+ ++++++ + F+FM+STRAG
Sbjct: 461 ILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEYNMENSTK-----------FIFMLSTRAG 509
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RAE
Sbjct: 510 GLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAE 569
Query: 480 RKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FG 515
KLRL V+ G +VD R + D++ +II FG
Sbjct: 570 VKLRLDKMVIQGGRLVD----NRAQLNKDEMLNIIRFG 603
>gi|432863455|ref|XP_004070075.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Oryzias latipes]
Length = 1814
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/494 (39%), Positives = 275/494 (55%), Gaps = 76/494 (15%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q++GL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL++ PL
Sbjct: 502 ELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLLVVPL 561
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ R+ IR YE V Q++ + F+ L+TT
Sbjct: 562 STLTSWQREFETWAPDMNVVVYIGDVMSRKTIRD--YEWVNHQTKR-----IRFNALITT 614
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+G L I W + +DEA RLKN S+LY L E F RLL+TGTP+QN+L
Sbjct: 615 YEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLME-FRSNHRLLITGTPLQNSLK 673
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFMLRRTK 274
ELW+L+HF MP F + F + GK ++ + SL +L F+LRR K
Sbjct: 674 ELWSLLHFLMPDKFDSWEDFED------------EHGKGRDNGYQSLHKVLEPFLLRRVK 721
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR------------ 316
+ + + LP E +T QK+ Y IL + K L+ +R
Sbjct: 722 KDVEKS----LPAKVEQILRVDMTAQQKQFYKWILTRNY-KALSKGTRGSSSGFLNIVME 776
Query: 317 ---TANH----------------QSLQNT--ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH LQ SGKLV+LD LL +L G+RVL+F+QM
Sbjct: 777 LKKCCNHCFLIKQPEDGDGEVQQDVLQGVVRGSGKLVLLDKLLTRLRERGNRVLIFSQMV 836
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL +L +++ ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 837 RMLDILAKYLTKKRFPFQRLDGSIKGEIRKQALDHFN-----------AEGSEDFCFLLS 885
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 886 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDII 945
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 946 ERAKKKMVLDHLVI 959
>gi|330803796|ref|XP_003289888.1| hypothetical protein DICPUDRAFT_154353 [Dictyostelium purpureum]
gi|325079999|gb|EGC33573.1| hypothetical protein DICPUDRAFT_154353 [Dictyostelium purpureum]
Length = 1851
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 201/507 (39%), Positives = 282/507 (55%), Gaps = 69/507 (13%)
Query: 22 GQTPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLK 80
G T +D ++A L+ +Q+EGL+WL+ ++ NV+L DEMGLGKT+Q ISFLSYL
Sbjct: 702 GFTKLDKQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLF 761
Query: 81 FSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQ 140
Q GPFLV+ PLS + W E AK+ P + ++ Y G R IR + + +
Sbjct: 762 NEQSIKGPFLVVVPLSTIENWQREFAKWAPLMNLIVYTGSSTSREIIRMHEFFTINRNGK 821
Query: 141 MSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP 200
L F VLLTTYD +L D+ L I W + +DEA RLKN SVL+ VL+ +
Sbjct: 822 KK----LNFHVLLTTYDFILKDKNILGSIKWEFLAVDEAHRLKNSESVLHEVLK-LYHTT 876
Query: 201 RRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTS 260
RLL+TGTP+QN+L ELW L++F MP+ F +L F + D K +Q
Sbjct: 877 NRLLVTGTPLQNSLKELWNLLNFLMPNKFTSLKDFQDQYSDL----------KENDQIAQ 926
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKL---- 310
L +L +LRR K+ + + LPP TE ++ +QKK Y IL K +L
Sbjct: 927 LHSVLKPHLLRRIKKDVEKS----LPPKTERILRVDLSAVQKKYYKWILTKNFQELNKGV 982
Query: 311 ----------LALSSRTANHQSL---------QNT---------ASGKLVVLDLLLKKLY 342
+ +T NH L QN ASGKLV+LD LL +L
Sbjct: 983 KGEKTTLLNIMTELKKTCNHPYLYESAKEECEQNAKDPLEAMIKASGKLVLLDKLLVRLK 1042
Query: 343 NSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYS 402
+GHRVL+F+QM + LDIL ++L+ R + ++RLDGS+ E R A+ F+ + +
Sbjct: 1043 ETGHRVLIFSQMVRMLDILAEYLKGRSFCFQRLDGSMSRENRSKAMDRFNAVDSPD---- 1098
Query: 403 EAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSI 462
F F++ST+AGG+G+NL ADTV+ ++ DWNPQ D QA RAHRIGQ NHV
Sbjct: 1099 -------FCFLLSTKAGGLGINLSTADTVVIFDSDWNPQNDLQAEARAHRIGQKNHVNIY 1151
Query: 463 NLVTEHTVEEVIMRRAERKLRLSHNVV 489
LV++ +VEE I+ RA++K+ L H V+
Sbjct: 1152 RLVSKKSVEEDILERAKQKMVLDHLVI 1178
>gi|194760843|ref|XP_001962642.1| GF14337 [Drosophila ananassae]
gi|190616339|gb|EDV31863.1| GF14337 [Drosophila ananassae]
Length = 1891
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 284/525 (54%), Gaps = 76/525 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL L GPFL + PLS
Sbjct: 526 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKVHHLYGPFLCVVPLS 585
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E + P + V+ Y+G+ + R I++ + Q L F+ +LTTY
Sbjct: 586 TMTAWQREFNLWAPDMNVVTYLGDIKSRELIQQYEW-------QFEGSKRLKFNCILTTY 638
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L E
Sbjct: 639 EIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLKE 697
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP F T F + +A +G +T L L ++LRR K+
Sbjct: 698 LWALLHFIMPEKFDTWENF------ELQHGNAEDKG-----YTRLHQQLEPYILRRVKKD 746
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTANH 320
+ + + + E+T LQK+ Y IL K L + NH
Sbjct: 747 VEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNH 806
Query: 321 QSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
+L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+L
Sbjct: 807 AALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVL 866
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
D+L+ R + ++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG+
Sbjct: 867 ADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGGL 915
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++K
Sbjct: 916 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQK 975
Query: 482 LRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FG 515
+ L H V+ G V+D+ ++ DDL +I+ FG
Sbjct: 976 MVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFG 1020
>gi|325187562|emb|CCA22100.1| Putative SWI/SNF related putative [Albugo laibachii Nc14]
Length = 1114
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 206/583 (35%), Positives = 305/583 (52%), Gaps = 94/583 (16%)
Query: 18 DERDGQTPV-------DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTL 70
D DG T V EFG +KP+Q+EGL+W++R + GVN +L DEMGLGKTL
Sbjct: 166 DLEDGHTRVTRIMHQPKTIEFGT---MKPYQLEGLNWMVRLHDSGVNGILADEMGLGKTL 222
Query: 71 QAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRT 130
Q+IS L+YL+ + GP L++ P S W+ E++++ P + +++G +E+R +R T
Sbjct: 223 QSISLLAYLREERGMTGPHLIIVPKSTVGNWMRELSRWCPSINAFKFMGSKEERAELRPT 282
Query: 131 MYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLY 190
V L FDVL+ +Y+V ++++ L +I W Y +IDEA R+KN S L
Sbjct: 283 -------------VVKLDFDVLVLSYEVAIIERPILQKILWKYLLIDEAHRVKNEHSKLS 329
Query: 191 NVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFK-DAVHSSSAP 249
V+RE F + RLL+TGTP+QNNL ELWAL++F +P +F F + F D H
Sbjct: 330 RVVRE-FKVQHRLLITGTPLQNNLHELWALLNFLLPDIFTAAEDFDAWFNVDEKHGE--- 385
Query: 250 KRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASIL 303
+ L IL F+LRR K + + LPP E ++ +Q++ Y +L
Sbjct: 386 -----ENVIKKLHTILRPFLLRRLKADV----EVQLPPKIETKLYVGLSEMQREWYMRVL 436
Query: 304 RKELPKLLALSS--------------RTANHQSLQNTA---------------SGKLVVL 334
++ L A+ + NH L A GKL +L
Sbjct: 437 HRDAAHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGPPYLEGPHLWENCGKLTLL 496
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
LL KL G R L+F QMT +DIL+D++ + Y RLDG + EER + F+
Sbjct: 497 HRLLPKLKAQGSRALIFCQMTSMMDILEDYMRYFNHEYCRLDGQTKGEERDIMMEEFN-- 554
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ G+ F F++STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIG
Sbjct: 555 ---------SPGSTTFCFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIG 605
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII- 513
Q V +++ TVEE I+ RAERKL L ++ R ++ + D+L +++
Sbjct: 606 QTKTVRVFRFISDGTVEEKIVERAERKLYLDAAIIQQ---GRLAQQNRKLSKDELMTMVR 662
Query: 514 FGL-HLFDPKA--INNEESDDLRLSG---LNSMVEKVIA-MRH 549
FG +F+ + I +++ D + G +M KV A M+H
Sbjct: 663 FGADEIFNARGSMITDDDIDAILAKGEERTEAMKSKVAADMQH 705
>gi|340728394|ref|XP_003402510.1| PREDICTED: LOW QUALITY PROTEIN: chromatin-remodeling complex ATPase
chain Iswi-like [Bombus terrestris]
Length = 959
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 198/517 (38%), Positives = 285/517 (55%), Gaps = 76/517 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ EL+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 128 SGELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHFRNIPGPHIVIV 187
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRN-IRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E K+ P L + +G+ E R IR M P +DV
Sbjct: 188 PKSTLANWMNEFKKWCPSLRAVCLIGDAETRNTFIREVMM-------------PGEWDVC 234
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++V+ ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QN
Sbjct: 235 VTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLLTGTPLQN 293
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P VF + + F S F +++S + E+ L +L F+LRR
Sbjct: 294 NLHELWSLLNFLLPDVFNSSDDFDSWF----NTNSFLGDNSLVER---LHAVLRPFLLRR 346
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLA 312
K + VE G L P EI V +Q++ Y +L K+ L +L
Sbjct: 347 LKSE-VEKG---LKPXKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILM 402
Query: 313 LSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A GK+V+LD LL KL RVL+F+QMT+
Sbjct: 403 QLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRM 462
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D+ R + Y RLDG+ E+R I ++ A ++ F+FM+STR
Sbjct: 463 LDILEDYCHWRGFQYCRLDGNTAHEDRQRQINEYN-----------APESEKFIFMLSTR 511
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V +TE+TVEE I+ R
Sbjct: 512 AGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVER 571
Query: 478 AERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII 513
AE KLRL V+ +VD ++TA+ D++ ++I
Sbjct: 572 AEVKLRLDKLVIQQGRLVD---AKQTALNKDEMLNMI 605
>gi|398410912|ref|XP_003856803.1| SNF2 family DNA-dependent chromodomain-containing ATPase
[Zymoseptoria tritici IPO323]
gi|339476688|gb|EGP91779.1| SNF2 family DNA-dependent chromodomain-containing ATPase
[Zymoseptoria tritici IPO323]
Length = 1578
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 194/507 (38%), Positives = 278/507 (54%), Gaps = 75/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ Q+ G+++L + G NV+L DEMGLGKT+Q +SF+++L+ + GPF+V+ P
Sbjct: 395 GDLREFQIHGVNFLAHHWCKGNNVILADEMGLGKTVQTVSFMNWLRNDRRQNGPFIVVVP 454
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +TP + + Y G R+ IR +H E N + F+VLLT
Sbjct: 455 LSTMPAWADTFDLWTPDINYVVYNGNEAARKIIR----DH--ELLVDGNPKKVKFNVLLT 508
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L+D GFLSQ+ W + +DEA RLKN S LY L + F P RLL+TGTP+QN L
Sbjct: 509 TYEYILVDSGFLSQLKWQFMAVDEAHRLKNRESQLYAKLMD-FGAPSRLLITGTPMQNTL 567
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
SEL ALM F MP +Q T + H+S+ + L +S +M+RRTK
Sbjct: 568 SELSALMDFLMPGKIFVDDQLDLT---SEHAST---------KLAELTDAISPYMIRRTK 615
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLA---------------- 312
QK+ LPP T E++ +Q + Y +IL + L A
Sbjct: 616 QKVEND----LPPKTEKIIRVELSDVQLEYYKNILTRNYAALNAGNKAGKTSLLNIMMEL 671
Query: 313 -----------------LSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
L+ A L+ T+SGK+++LD LL K+ GHRVL+F+Q
Sbjct: 672 KKASNHPFMFPNAEDRILAGSDARDDQLKALITSSGKMMLLDQLLTKMKRDGHRVLIFSQ 731
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M + LDIL D+L+LR + ++RLDG+I A R AI HF+ + + + F F+
Sbjct: 732 MVKMLDILGDYLQLRGHQFQRLDGTIAAGPRRMAIDHFNAKDSQD-----------FCFL 780
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ TVEE
Sbjct: 781 LSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKKPVTIYRLVSKDTVEEE 840
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKE 500
++ RA KL L + V D++ +E
Sbjct: 841 VLERARNKLMLEFITIQRGVTDKDARE 867
>gi|14028669|gb|AAK52454.1|AF325921_1 DNA-dependent ATPase SNF2H [Mus musculus]
Length = 1051
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 192/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 169 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 228
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 229 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 276
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 277 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSNLSEIVRE-FKTTNRLLLT 335
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F ++++ K+ E+ L +L
Sbjct: 336 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNSLGDQKLVER---LHMVLR 388
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 389 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 444
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL RVL+F
Sbjct: 445 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQSSRVLIF 504
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 505 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 553
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 614 ERIVERAEMKLRLDSIVI 631
>gi|427794015|gb|JAA62459.1| Putative chromatin remodeling complex swi/snf component swi2,
partial [Rhipicephalus pulchellus]
Length = 1939
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 279/489 (57%), Gaps = 69/489 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+EGL+WL + V+L DEMGLGKT+Q ISFL+YL GPFL++ PL
Sbjct: 522 ELRDYQLEGLNWLANSWCKENGVILADEMGLGKTIQTISFLTYLFNHHALYGPFLLVVPL 581
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E A+++P + V+ Y+G+ R IR + H + L F+ +LTT
Sbjct: 582 STLASWQKEFAQWSPDMNVVVYLGDVSSRSMIREHEWCHPGNKR-------LKFNAVLTT 634
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+GFL + W +DEA RLKN S+LY L E F RLL+TGTP+QN+L
Sbjct: 635 YEILLKDKGFLGNVSWAVLGVDEAHRLKNDDSLLYKSLFE-FDTNHRLLITGTPLQNSLK 693
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F + F +A H SA K +T L L F+LRR K+
Sbjct: 694 ELWALLHFIMPQKFDSWEDF-----EAEHKESADK------GYTKLHKQLEPFLLRRVKK 742
Query: 276 KLVECGHLMLPP------LTEITVLQKKVYASILRKE---LPKLLALS-----------S 315
+ + LP E+T +QK+ Y IL K L K L S
Sbjct: 743 DVEKS----LPAKVERILRVEMTTVQKQYYKWILTKNYKALSKGLKGSQSGFINIMMELK 798
Query: 316 RTANH-------------QSLQNT--ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
+ NH +LQ SGKL++LD LL +L +GHRVL+F+QM + LDI
Sbjct: 799 KCCNHAMLIRPPDNPNNLDALQQIIRGSGKLLLLDKLLCRLRETGHRVLVFSQMVRMLDI 858
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
+ D+L+LR++ ++RLDGSI+ E R A+ HF+ ++ + F F++STRAGG
Sbjct: 859 IADYLQLRRFPFQRLDGSIKGELRRQALDHFNADASQD-----------FCFLLSTRAGG 907
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTV+ ++ DWNPQ D QA RAHRIGQ N V LVT+++VEE I+ RA+R
Sbjct: 908 LGINLATADTVVIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEDIIERAKR 967
Query: 481 KLRLSHNVV 489
K+ L H V+
Sbjct: 968 KMVLDHLVI 976
>gi|332026198|gb|EGI66340.1| Chromodomain-helicase-DNA-binding protein 1 [Acromyrmex echinatior]
Length = 1821
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 211/536 (39%), Positives = 298/536 (55%), Gaps = 74/536 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+WLI + +V+L DEMGLGKT+Q I FL YL +Q GPFL++ PLS
Sbjct: 450 LRDYQMDGLNWLIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTQHLHGPFLLVVPLS 509
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W EM+++ P + + Y+G+ R IR YE + S+ L F+V+LTTY
Sbjct: 510 TMTSWQREMSQWAPDINFVTYLGDINSRNVIRE--YEWCYQDSKR-----LKFNVILTTY 562
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D+ FL + W ++DEA RLKN S+LY L E F RLL+TGTP+QN+L E
Sbjct: 563 EIVLKDKTFLGALNWAVLLVDEAHRLKNDDSLLYKALTE-FHTNHRLLITGTPLQNSLKE 621
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MPS F + +F + H ++A K ++ L L F+LRR K+
Sbjct: 622 LWALLHFIMPSKFASWEEF-----EKQHDNAAQK------GYSKLHKQLEPFILRRVKKD 670
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRKE---------------------------- 306
+ + + + E+T LQK+ Y IL K
Sbjct: 671 VEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYEALRKGVKGSTTTFLNIVIELKKCCNH 730
Query: 307 --LPKLLALSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
L K + N LQ SGKLV+LD LL +L ++GHRVL+F+QM + LDIL
Sbjct: 731 AFLTKPMDAEREKTNEDYLQQLIRGSGKLVLLDKLLVRLRDTGHRVLIFSQMVRMLDILG 790
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
++L+ R + ++RLDGSI+ E R A+ HF+ A G+ F F++STRAGG+G
Sbjct: 791 EYLQRRHFPFQRLDGSIKGELRKQALDHFN-----------AEGSQDFCFLLSTRAGGLG 839
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+ +VEE I+ RA++K+
Sbjct: 840 INLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNKVNIYRLVTKKSVEEEIVERAKQKM 899
Query: 483 RLSHNVVGD-DVVDREVKERTAVETD-------DLRSII-FGLH-LFDPKAINNEE 528
L H V+ D R V ++ T+ DL +I+ FG LF + +EE
Sbjct: 900 VLDHLVIQRMDTTGRTVLDKKNAGTNSNPFNKEDLNAILKFGAEDLFKDEEDGDEE 955
>gi|195161920|ref|XP_002021804.1| GL26702 [Drosophila persimilis]
gi|194103604|gb|EDW25647.1| GL26702 [Drosophila persimilis]
Length = 1943
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 285/525 (54%), Gaps = 76/525 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL L GPFL + PLS
Sbjct: 561 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKVHHLYGPFLCVVPLS 620
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E + P + V+ Y+G+ + R I++ + Q L F+ +LTTY
Sbjct: 621 TMTAWQREFDLWAPDMNVVTYLGDIKSREMIQQYEW-------QFEGSKRLKFNCILTTY 673
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L E
Sbjct: 674 EIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLKE 732
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP F T + F + +A +G +T L L ++LRR K+
Sbjct: 733 LWALLHFIMPEKFDTWDNF------ELQHGNAEDKG-----YTRLHQQLEPYILRRVKKD 781
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSS--------------RTANH 320
+ + + + E+T LQK+ Y IL K L + NH
Sbjct: 782 VEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKKGSTSTFLNIVIELKKCCNH 841
Query: 321 QSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
+L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+L
Sbjct: 842 AALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVL 901
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
D+L+ R + ++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG+
Sbjct: 902 ADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGGL 950
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++K
Sbjct: 951 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQK 1010
Query: 482 LRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FG 515
+ L H V+ G V+D+ ++ DDL +I+ FG
Sbjct: 1011 MVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFG 1055
>gi|334350211|ref|XP_001373609.2| PREDICTED: probable global transcription activator SNF2L1
[Monodelphis domestica]
Length = 1153
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 193/490 (39%), Positives = 269/490 (54%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +QV GL+W+I Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 169 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 228
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L + +G+++ R R + + P +DV +T+Y
Sbjct: 229 TLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDV------------MMPGEWDVCVTSY 276
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 277 EMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNLHE 335
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 336 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDHKLVER---------LHAVLKPFLLRRIK 386
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + LPP E+ + +Q++ Y IL K+ L +L
Sbjct: 387 AEVEKS----LPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQL 442
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL KL G RVL+F+QMT+ LD
Sbjct: 443 RKCCNHPYLFDGAEPGPPYTTDTHLVNNSGKMVALDKLLSKLKEQGSRVLIFSQMTRLLD 502
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 503 ILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFN-----------APNSTKFIFMLSTRAG 551
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVE+ I+ RAE
Sbjct: 552 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEDRIVERAE 611
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 612 IKLRLDSIVI 621
>gi|126331506|ref|XP_001377204.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Monodelphis
domestica]
Length = 1050
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 192/498 (38%), Positives = 274/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 168 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 227
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W++E ++ P L + +G++EQR R + + P
Sbjct: 228 GPHMVLVPKSTLHNWMNEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 275
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 276 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 334
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 335 GTPLQNNLHELWALLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 387
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 388 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 443
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL RVL+F
Sbjct: 444 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQDSRVLIF 503
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ FV
Sbjct: 504 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNS-----------SKFV 552
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 553 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 612
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 613 ERIVERAEMKLRLDSIVI 630
>gi|384485492|gb|EIE77672.1| hypothetical protein RO3G_02376 [Rhizopus delemar RA 99-880]
Length = 1497
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/497 (39%), Positives = 274/497 (55%), Gaps = 71/497 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ EL+ +Q+ G++W+ + N +L DEMGLGKT+Q ISF + L Q GPF
Sbjct: 426 EYIRGGELRDYQLHGVNWMYWLWCKNRNGILADEMGLGKTVQTISFFNVLYHKQKLYGPF 485
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
LV+ PLS +D W++E ++ P++ V+ Y+G R R IR T + +S + + F
Sbjct: 486 LVVVPLSTSDNWMNEFKQWAPEMNVICYLGNRASREAIRNTEF-------YVSGTNKIKF 538
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
++L+TTY++VL D+ L I W Y +DEA RLKN S LY L F RLL+TGTP
Sbjct: 539 NILITTYEIVLKDKDILGSIRWQYLAVDEAHRLKNSDSQLYEAL-SSFSTANRLLITGTP 597
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QN++ EL AL+ F MPS+ LS + + A + KIK LK I M
Sbjct: 598 LQNSIKELLALVRFLMPSMD------LSQYSFDLDVEDANQEEKIKALHEQLKSI----M 647
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS-------- 315
LRR K+ + + LP TE ++ +QK Y IL + LA S
Sbjct: 648 LRRLKKDVEKS----LPNKTERILRVQLSEMQKSYYKGILTRNF-DFLASSCENKKQWLN 702
Query: 316 ------RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
+ +NH L A SGK+V+LD LL ++ GHRVL+F+
Sbjct: 703 IAVELKKASNHPFLFPDAEKHTMDRMEQLKGLVENSGKMVLLDKLLTRMKTDGHRVLIFS 762
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM LDIL D++ LR + ++RLDGS + EER AI HF+ A + FVF
Sbjct: 763 QMVMMLDILSDYMTLRGHPFQRLDGSTKPEERNKAIEHFN-----------APDSPDFVF 811
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++STRAGG+G+NLV ADTVI ++ DWNPQ D QA+ RAHRIGQ V V++ T+EE
Sbjct: 812 LLSTRAGGMGINLVTADTVIIFDSDWNPQNDLQAMSRAHRIGQTKSVNVYRFVSKGTMEE 871
Query: 473 VIMRRAERKLRLSHNVV 489
I+ RA+RK+ L + ++
Sbjct: 872 DIIERAKRKMVLEYCII 888
>gi|427794013|gb|JAA62458.1| Putative chromatin remodeling complex swi/snf component swi2,
partial [Rhipicephalus pulchellus]
Length = 1946
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 201/489 (41%), Positives = 279/489 (57%), Gaps = 69/489 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+EGL+WL + V+L DEMGLGKT+Q ISFL+YL GPFL++ PL
Sbjct: 522 ELRDYQLEGLNWLANSWCKENGVILADEMGLGKTIQTISFLTYLFNHHALYGPFLLVVPL 581
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E A+++P + V+ Y+G+ R IR + H + L F+ +LTT
Sbjct: 582 STLASWQKEFAQWSPDMNVVVYLGDVSSRSMIREHEWCHPGNKR-------LKFNAVLTT 634
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+GFL + W +DEA RLKN S+LY L E F RLL+TGTP+QN+L
Sbjct: 635 YEILLKDKGFLGNVSWAVLGVDEAHRLKNDDSLLYKSLFE-FDTNHRLLITGTPLQNSLK 693
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F + F +A H SA K +T L L F+LRR K+
Sbjct: 694 ELWALLHFIMPQKFDSWEDF-----EAEHKESADK------GYTKLHKQLEPFLLRRVKK 742
Query: 276 KLVECGHLMLPP------LTEITVLQKKVYASILRKE---LPKLLALS-----------S 315
+ + LP E+T +QK+ Y IL K L K L S
Sbjct: 743 DVEKS----LPAKVERILRVEMTTVQKQYYKWILTKNYKALSKGLKGSQSGFINIMMELK 798
Query: 316 RTANH-------------QSLQNT--ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
+ NH +LQ SGKL++LD LL +L +GHRVL+F+QM + LDI
Sbjct: 799 KCCNHAMLIRPPDNPNNLDALQQIIRGSGKLLLLDKLLCRLRETGHRVLVFSQMVRMLDI 858
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
+ D+L+LR++ ++RLDGSI+ E R A+ HF+ ++ + F F++STRAGG
Sbjct: 859 IADYLQLRRFPFQRLDGSIKGELRRQALDHFNADASQD-----------FCFLLSTRAGG 907
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTV+ ++ DWNPQ D QA RAHRIGQ N V LVT+++VEE I+ RA+R
Sbjct: 908 LGINLATADTVVIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEDIIERAKR 967
Query: 481 KLRLSHNVV 489
K+ L H V+
Sbjct: 968 KMVLDHLVI 976
>gi|354486534|ref|XP_003505435.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Cricetulus griseus]
Length = 873
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 193/485 (39%), Positives = 265/485 (54%), Gaps = 68/485 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EG++WL + + +LGDEMGLGKT Q I+ L YL GPFL+LCPLS
Sbjct: 18 LRSYQLEGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALLVYLVGRLNDEGPFLILCPLS 77
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V W E+ +F P L + YVG +E+R ++++ + + F VLLTTY
Sbjct: 78 VLSNWKEELERFAPGLSCVTYVGGKEERAHLQQGLQQEPH------------FHVLLTTY 125
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L D FL W +DEA RLKN SS+L+ L E F + RLL+TGTP+QN+L E
Sbjct: 126 EICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSE-FSVVFRLLLTGTPVQNSLQE 184
Query: 217 LWALMHFCMPSVFG--TLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
L++L+ P +F + F+ ++D S + + L+ + + K
Sbjct: 185 LYSLLSVVEPDLFCREQVEDFVQRYQDIEKESKSANELHRLLRPFLLRRVKAQVATELPK 244
Query: 275 QKLVECGHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRTANHQSLQNT-------- 326
+ V H M + LQK+ Y +IL K+L A + A LQN
Sbjct: 245 KTEVVIYHGM-------SALQKQYYKAILMKDLD---AFENEMAKKVKLQNVLTQLRKCV 294
Query: 327 ----------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDF 364
ASGKL +LD LL LY+ GHRVLLF+QMT LDILQD+
Sbjct: 295 DHPYLFDGVEPEPFEIGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDY 354
Query: 365 LELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLN 424
++ R YSYER+DGS+R EER AI++F G FVF++STRAGGVG+N
Sbjct: 355 MDYRGYSYERVDGSVRGEERHLAIKNF-------------GKEPIFVFLLSTRAGGVGMN 401
Query: 425 LVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRL 484
L AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A KL+L
Sbjct: 402 LTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQL 461
Query: 485 SHNVV 489
++ V+
Sbjct: 462 TNMVM 466
>gi|198473015|ref|XP_001356144.2| GA17649 [Drosophila pseudoobscura pseudoobscura]
gi|198139261|gb|EAL33204.2| GA17649 [Drosophila pseudoobscura pseudoobscura]
Length = 1943
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 199/525 (37%), Positives = 285/525 (54%), Gaps = 76/525 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL L GPFL + PLS
Sbjct: 561 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKVHHLYGPFLCVVPLS 620
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E + P + V+ Y+G+ + R I++ + Q L F+ +LTTY
Sbjct: 621 TMTAWQREFDLWAPDMNVVTYLGDIKSREMIQQYEW-------QFEGSKRLKFNCILTTY 673
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L E
Sbjct: 674 EIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLKE 732
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP F T + F + +A +G +T L L ++LRR K+
Sbjct: 733 LWALLHFIMPEKFDTWDNF------ELQHGNAEDKG-----YTRLHQQLEPYILRRVKKD 781
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSS--------------RTANH 320
+ + + + E+T LQK+ Y IL K L + NH
Sbjct: 782 VEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKKGSTSTFLNIVIELKKCCNH 841
Query: 321 QSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
+L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+L
Sbjct: 842 AALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVL 901
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
D+L+ R + ++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG+
Sbjct: 902 ADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGGL 950
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++K
Sbjct: 951 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQK 1010
Query: 482 LRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FG 515
+ L H V+ G V+D+ ++ DDL +I+ FG
Sbjct: 1011 MVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFG 1055
>gi|412991118|emb|CCO15963.1| SNF2 super family [Bathycoccus prasinos]
Length = 970
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 203/576 (35%), Positives = 312/576 (54%), Gaps = 78/576 (13%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+FG ++ +Q+EGL+W+I+ + G+N +L DEMGLGKTLQ IS L YL + GP
Sbjct: 112 KFGT---MRQYQIEGLNWMIKLFDQGINGILADEMGLGKTLQTISLLGYLHEYRGITGPH 168
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
LV+ P S W++E ++ P L V ++ G +E R E+ + ++ P F
Sbjct: 169 LVVVPKSTLGNWMNEFKRWCPVLRVFKFHGNQEAR------------EEQKRDSMRPGGF 216
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
DV +T+Y++V+ ++ L + W Y +IDEA RLKN S L LR R+L+TGTP
Sbjct: 217 DVCVTSYEMVIKEKSALKKFHWRYIVIDEAHRLKNEKSRLAVTLR-MLSCNNRMLITGTP 275
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL ELWAL++F +P VF F D ++ + G + L +L F+
Sbjct: 276 LQNNLHELWALLNFLLPEVFAVAGDF-----DDFFANVEDEDGGSVDVVQQLHKVLRPFL 330
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR------- 316
LRR K ++ + LPP E ++ LQK++Y IL+K++ + + S R
Sbjct: 331 LRRLKAEVEKS----LPPKKETILKIGMSDLQKQIYKRILQKDIDVVNSGSDRARLLNMV 386
Query: 317 -----TANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
NH L T SGKL++LD LL KL G RVL+F+QMT+
Sbjct: 387 MQLRKCCNHPYLFEGAEPGPPFMTGEHLVTTSGKLILLDKLLPKLQQRGSRVLIFSQMTR 446
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LD+L+D+L R Y Y R+DG+ + R +I ++ G + FVF++ST
Sbjct: 447 LLDVLEDYLMYRGYQYCRIDGNTDGQIREDSIEEYN-----------RPGTEKFVFLLST 495
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI Y+ DWNPQ+D QA+ RAHRIGQ V T+++VEE ++
Sbjct: 496 RAGGLGINLATADTVILYDSDWNPQMDLQAMDRAHRIGQKKEVSVFRFCTDNSVEEKVIE 555
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNEESDDLRL 534
+A +KL L V+ + + K +V DDL +++ +G ++FD A+ + ++D +
Sbjct: 556 KAYKKLALDALVIQQGRLQQNAK---SVNKDDLANMVRYGAENIFDSTAVTDLTAED--V 610
Query: 535 SGLNSMVEKVIAMRHEQVSGKAGR--KFEVNPVALL 568
+ + E+ +E++SG + KF +N A L
Sbjct: 611 DAIIAKGEEATKQLNEKMSGFTDKALKFSMNADASL 646
>gi|395542615|ref|XP_003773222.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Sarcophilus
harrisii]
Length = 1041
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/498 (38%), Positives = 274/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 159 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 218
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W++E ++ P L + +G++EQR R + + P
Sbjct: 219 GPHMVLVPKSTLHNWMNEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 266
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 267 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 325
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 326 GTPLQNNLHELWALLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 378
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 379 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 434
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL RVL+F
Sbjct: 435 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQDSRVLIF 494
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I Y+E + FV
Sbjct: 495 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSIN----------AYNEPNSS-KFV 543
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 544 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 603
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 604 ERIVERAEMKLRLDSIVI 621
>gi|194883574|ref|XP_001975876.1| GG20326 [Drosophila erecta]
gi|190659063|gb|EDV56276.1| GG20326 [Drosophila erecta]
Length = 1027
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 305/574 (53%), Gaps = 88/574 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+
Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E K+ P L + +G+++ R R + + P +DV +
Sbjct: 185 PKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDV------------LMPGEWDVCV 232
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNN 291
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F F ++++ + T L +L F+LRR
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRL 344
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K ++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 345 KAEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQ 400
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ L
Sbjct: 401 LRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRML 460
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y+Y RLDG E+R I+ F++ ++ + F+FM+STRA
Sbjct: 461 DILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSTK-----------FLFMLSTRA 509
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RA
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 479 ERKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FGLH-LFDPKA--INNEESDDL- 532
E KLRL V+ G +VD + + D++ +II FG + +F K I +E+ D +
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQ---LNKDEMLNIIRFGANQVFSSKETDITDEDIDVIL 626
Query: 533 ---------RLSGLNSMVEKVIAMRHEQVSGKAG 557
+ + L+SM E + +G+AG
Sbjct: 627 ERGEAKTAEQKAALDSMGESSLRTFTMDTNGEAG 660
>gi|195485258|ref|XP_002091017.1| GE12485 [Drosophila yakuba]
gi|194177118|gb|EDW90729.1| GE12485 [Drosophila yakuba]
Length = 1027
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 305/574 (53%), Gaps = 88/574 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+
Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E K+ P L + +G+++ R R + + P +DV +
Sbjct: 185 PKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDV------------LMPGEWDVCV 232
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNN 291
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F F ++++ + T L +L F+LRR
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRL 344
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K ++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 345 KAEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQ 400
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ L
Sbjct: 401 LRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRML 460
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y+Y RLDG E+R I+ F++ ++ + F+FM+STRA
Sbjct: 461 DILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAK-----------FLFMLSTRA 509
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RA
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 479 ERKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FGLH-LFDPKA--INNEESDDL- 532
E KLRL V+ G +VD + + D++ +II FG + +F K I +E+ D +
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQ---LNKDEMLNIIRFGANQVFSSKETDITDEDIDVIL 626
Query: 533 ---------RLSGLNSMVEKVIAMRHEQVSGKAG 557
+ + L+SM E + +G+AG
Sbjct: 627 ERGEAKTAEQKAALDSMGESSLRTFTMDTNGEAG 660
>gi|345324924|ref|XP_001513276.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5
[Ornithorhynchus anatinus]
Length = 1051
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 192/498 (38%), Positives = 274/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 169 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 228
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W++E ++ P L + +G++EQR R + + P
Sbjct: 229 GPHMVLVPKSTLHNWMNEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 276
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 277 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 335
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 336 GTPLQNNLHELWALLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 388
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 389 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 444
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL RVL+F
Sbjct: 445 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQDSRVLIF 504
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ FV
Sbjct: 505 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNS-----------SKFV 553
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 614 ERIVERAEMKLRLDSIVI 631
>gi|195333840|ref|XP_002033594.1| GM21414 [Drosophila sechellia]
gi|194125564|gb|EDW47607.1| GM21414 [Drosophila sechellia]
Length = 1027
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 205/574 (35%), Positives = 305/574 (53%), Gaps = 88/574 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+
Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E K+ P L + +G+++ R R + + P +DV +
Sbjct: 185 PKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDV------------LMPGEWDVCV 232
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNN 291
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F F ++++ + T L +L F+LRR
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRL 344
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K ++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 345 KAEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQ 400
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ L
Sbjct: 401 LRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRML 460
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y+Y RLDG E+R I+ F++ ++ + F+FM+STRA
Sbjct: 461 DILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAK-----------FLFMLSTRA 509
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RA
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 479 ERKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FGLH-LFDPKA--INNEESDDL- 532
E KLRL V+ G +VD + + D++ +II FG + +F K I +E+ D +
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQ---LNKDEMLNIIRFGANQVFSSKETDITDEDIDVIL 626
Query: 533 ---------RLSGLNSMVEKVIAMRHEQVSGKAG 557
+ + L+SM E + +G+AG
Sbjct: 627 ERGEAKTAEQKAALDSMGESSLRTFTMDTNGEAG 660
>gi|383866448|ref|XP_003708682.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Megachile rotundata]
Length = 1009
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 196/516 (37%), Positives = 285/516 (55%), Gaps = 74/516 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ EL+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 128 SGELRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFRNIPGPHIVIV 187
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W++E K+ P L + +G+ E R R + + P +DV +
Sbjct: 188 PKSTLANWMNEFKKWCPTLRAVCLIGDAETRNTFIRDV------------MMPGEWDVCV 235
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++V+ ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 236 TSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLLTGTPLQNN 294
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELW+L++F +P VF + + F S F +++S + E+ L +L F+LRR
Sbjct: 295 LHELWSLLNFLLPDVFNSSDDFDSWF----NTNSFLGDNSLVER---LHAVLRPFLLRRL 347
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K + VE G L P EI V +Q++ Y +L K+ L +L
Sbjct: 348 KSE-VEKG---LKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQ 403
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A GK+V+LD LL KL RVL+F+QMT+ L
Sbjct: 404 LRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVILDKLLPKLQQQESRVLIFSQMTRML 463
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R + Y RLDG+ E+R I ++ A ++ F+FM+STRA
Sbjct: 464 DILEDYCHWRGFQYCRLDGNTAHEDRQRQINEYN-----------APESEKFIFMLSTRA 512
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V +TE+TVEE I+ RA
Sbjct: 513 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERA 572
Query: 479 ERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII 513
E KLRL V+ +VD ++TA+ D++ ++I
Sbjct: 573 EVKLRLDKLVIQQGRLVD---AKQTALNKDEMLNMI 605
>gi|1448983|gb|AAC37264.1| chromodomain-helicase-DNA-binding protein [Drosophila melanogaster]
Length = 1883
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 217/585 (37%), Positives = 312/585 (53%), Gaps = 87/585 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPL 95
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PL
Sbjct: 528 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLY-GPFLCVVPL 586
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ + R I++ YE E S+ L F+ +LTT
Sbjct: 587 STMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQ--YEWQFESSKR-----LKFNCILTT 639
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 640 YEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLK 698
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F T F V +A +G T L L ++LRR K+
Sbjct: 699 ELWALLHFIMPDKFDTWENF------EVQHGNAEDKG-----HTRLHQQLEPYILRRVKK 747
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQK+ Y IL K L + N
Sbjct: 748 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCN 807
Query: 320 HQSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
H +L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+
Sbjct: 808 HAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDV 867
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L D+L+ R + ++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG
Sbjct: 868 LADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGG 916
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++
Sbjct: 917 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 976
Query: 481 KLRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ ++ DDL +I+ FG LF + +E
Sbjct: 977 KMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFK----DEQE 1032
Query: 529 SDDLRLSGLNSMVEKVIAMRHEQVSGKAG---RKFEVNPVALLEE 570
DD + ++ ++ + R+E A F+V +A EE
Sbjct: 1033 HDDDLVCDIDEILRRA-ETRNEDPEMPADDLLSAFKVASIAAFEE 1076
>gi|403172667|ref|XP_003331803.2| chromodomain-helicase-DNA-binding protein 1 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
gi|375169944|gb|EFP87384.2| chromodomain-helicase-DNA-binding protein 1 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 1824
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 203/526 (38%), Positives = 284/526 (53%), Gaps = 79/526 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK QV GL+WL + G N +L DEMGLGKT+Q +FLSYL + GPFL++
Sbjct: 461 VGGTLKDFQVTGLNWLAYVWHKGQNGILADEMGLGKTVQTCAFLSYLFHTMEQYGPFLIV 520
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W + A++ P L V+ Y+G + R+ IR + K+ + F++L
Sbjct: 521 VPLSTLPAWQMQCAQWAPDLNVIAYIGNKVSRQTIREYEFGPPKK---------MKFNIL 571
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+++L D+ L+ I W Y +DEA RLK+ S LY L F + +LL+TGTP+QN
Sbjct: 572 LTTYEIILKDRAELAHIKWQYLAVDEAHRLKSSESQLYEALMS-FNIQSKLLITGTPLQN 630
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
++ EL ALMHF P F D K KIK+ L L + MLRR
Sbjct: 631 SVKELLALMHFLQPDKFDLSEGHFDLEDDE-------KEIKIKD----LHNKLQSIMLRR 679
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS----------- 315
K+ +V+ LP +E ++ LQ Y +IL + L + S
Sbjct: 680 LKKDVVQS----LPTKSERILRVEMSELQMFWYKAILTRNYAALASSDSQVSLLNIAMEL 735
Query: 316 -RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ +NH L A SGK+++LD LL +L GHRVL+F+QM +
Sbjct: 736 KKASNHPFLFPGAEPMTDSKEAALRGVVVNSGKMILLDKLLTRLKAEGHRVLIFSQMVRM 795
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDI+ D++ R Y ++RLDG++ +EER AI HF+ A G+ F F++STR
Sbjct: 796 LDIMSDYMSYRGYIFQRLDGTVPSEERRKAIGHFN-----------APGSPDFAFLLSTR 844
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV LVT+ TVEE ++ R
Sbjct: 845 AGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKNHVNVYRLVTKDTVEEDVLER 904
Query: 478 AERKLRLSHNVV------GDDVVDREV-KERTAVETDDLRSII-FG 515
A+RK+ L + ++ G V +E K T DDL +I+ FG
Sbjct: 905 AKRKMILEYAIINQMDTSGKHVGRKEASKPETTFNKDDLSAILKFG 950
>gi|194756516|ref|XP_001960523.1| GF13400 [Drosophila ananassae]
gi|190621821|gb|EDV37345.1| GF13400 [Drosophila ananassae]
Length = 1027
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 193/519 (37%), Positives = 282/519 (54%), Gaps = 75/519 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+
Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E K+ P L + +G++E R R + + P +DV +
Sbjct: 185 PKSTLQNWVNEFKKWCPTLRAVCLIGDQEARNTFIRDV------------LMPGEWDVCV 232
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNN 291
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F F ++++ + T L +L F+LRR
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRL 344
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K ++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 345 KAEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQ 400
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ L
Sbjct: 401 LRKCTNHPYLFDGAEPGPPYTTDTHLIYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRML 460
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y+Y RLDG E+R I+ +++ ++ + F+FM+STRA
Sbjct: 461 DILEDYCHWRGYNYCRLDGQTPHEDRNRQIQEYNMDNSTK-----------FIFMLSTRA 509
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RA
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 479 ERKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FG 515
E KLRL V+ G +VD + + D++ +II FG
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQ---LNKDEMLNIIRFG 605
>gi|50285639|ref|XP_445248.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524552|emb|CAG58154.1| unnamed protein product [Candida glabrata]
Length = 1115
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 191/518 (36%), Positives = 278/518 (53%), Gaps = 71/518 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+ +QV+GL+WL+ + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 171 INGQLRDYQVQGLNWLVSLDKNRIAGILADEMGLGKTLQTISFLGYLRYIKKIPGPFLVI 230
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ K+TP++ G++E+R + + + FDV+
Sbjct: 231 APKSTLNNWLREINKWTPEVNAFILQGDKEERARLIQDKF------------MACDFDVV 278
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ ++ W Y +IDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 279 IASYEIIIREKAAFRKMNWEYIMIDEAHRIKNEESMLSQVLRE-FHSKNRLLITGTPLQN 337
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F K K L +L F+LRR
Sbjct: 338 NLHELWALLNFLLPDIFSDSQDFDEWFSKETDEEDQEKIVK------QLHTVLQPFLLRR 391
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----------- 315
K VE L P E+ V +QKK Y IL K++ + A S
Sbjct: 392 IKSD-VETSLL---PKKELNVYVGMSPMQKKWYRQILEKDIDAVNADSGSKESKTRLLNI 447
Query: 316 -----RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NH L + A S KL VLD LL+KL +G RVL+F+QM+
Sbjct: 448 VMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSEKLKVLDKLLRKLKEAGSRVLIFSQMS 507
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ R+Y Y R+DGS E+R AI ++ A + F+F+++
Sbjct: 508 RVLDILEDYCYFREYEYCRIDGSTAHEDRIEAIDEYN-----------APDSKKFLFLLT 556
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AD V+ ++ DWNPQ D QA+ RAHRIGQ V VT+++VEE I+
Sbjct: 557 TRAGGLGINLTTADVVVLFDSDWNPQADLQAMDRAHRIGQKKQVRVFRFVTDNSVEEKIL 616
Query: 476 RRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + + KE D L S+I
Sbjct: 617 ERATQKLRLDQLVIQQNRPTNKKKENKNDSKDALLSMI 654
>gi|393217337|gb|EJD02826.1| transcription regulator [Fomitiporia mediterranea MF3/22]
Length = 1457
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 201/493 (40%), Positives = 273/493 (55%), Gaps = 71/493 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + G N +L DEMGLGKT+Q ++FLSYL GPFLV+ P
Sbjct: 403 GELKDFQLTGLNWLAYLWSKGENGILADEMGLGKTVQTVAFLSYLFHQHNQYGPFLVIVP 462
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W + A + P L V+ Y+G R IR YE E S+ V +VLLT
Sbjct: 463 LSTITAWQMQFAAWAPDLNVICYIGSSRSREVIRN--YEVYAEPSKSKKVK---MNVLLT 517
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+++L D L I W +DEA RLKN S LY LR F +LL+TGTP+QNN+
Sbjct: 518 TYELILRDAAMLGDIKWQALAVDEAHRLKNSESQLYEALRT-FHAASKLLITGTPLQNNV 576
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F N+F DA H + KIKE L L + MLRR K
Sbjct: 577 KELLSLMHFLMPEKFALTNEF--DLADADHEA------KIKE----LHKQLESLMLRRLK 624
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ +V+ LP +E ++ LQ Y +IL K L+ ++
Sbjct: 625 RDVVKS----LPTKSERILRVEMSALQTHFYKNILTKNYQGLVKSANGNGNISLLNIAME 680
Query: 316 --RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L + A SGK+V+LD LL KL GHRVL+F+QM +
Sbjct: 681 LKKAANHPYLFDGAENRSDNREETLKGLVMSSGKMVLLDKLLAKLKQDGHRVLIFSQMVR 740
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++ LR Y+++RLDG++ +E R +I HF+ A G+ F F++ST
Sbjct: 741 MLDILSDYMSLRGYTHQRLDGTVSSEVRKKSIAHFN-----------ADGSSDFAFLLST 789
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE ++
Sbjct: 790 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVNVYRFVSKDTMEEDVLE 849
Query: 477 RAERKLRLSHNVV 489
RA+RK+ L + ++
Sbjct: 850 RAKRKMVLEYAII 862
>gi|17737463|ref|NP_523719.1| imitation SWI, isoform A [Drosophila melanogaster]
gi|24653132|ref|NP_725203.1| imitation SWI, isoform B [Drosophila melanogaster]
gi|24653134|ref|NP_725204.1| imitation SWI, isoform C [Drosophila melanogaster]
gi|6647560|sp|Q24368.1|ISWI_DROME RecName: Full=Chromatin-remodeling complex ATPase chain Iswi;
AltName: Full=CHRAC 140 kDa subunit; AltName:
Full=Nucleosome-remodeling factor 140 kDa subunit;
Short=NURF-140; AltName: Full=Protein imitation swi
gi|439197|gb|AAA19868.1| ISWI protein [Drosophila melanogaster]
gi|7303422|gb|AAF58479.1| imitation SWI, isoform A [Drosophila melanogaster]
gi|21627326|gb|AAM68637.1| imitation SWI, isoform B [Drosophila melanogaster]
gi|21627327|gb|AAM68638.1| imitation SWI, isoform C [Drosophila melanogaster]
gi|206597326|gb|ACI15757.1| FI04427p [Drosophila melanogaster]
Length = 1027
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 297/554 (53%), Gaps = 78/554 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+
Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E K+ P L + +G+++ R R + + P +DV +
Sbjct: 185 PKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDV------------LMPGEWDVCV 232
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNN 291
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F F ++++ + T L +L F+LRR
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRL 344
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K ++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 345 KAEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQ 400
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ L
Sbjct: 401 LRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRML 460
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y+Y RLDG E+R I+ F++ ++ + F+FM+STRA
Sbjct: 461 DILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAK-----------FLFMLSTRA 509
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RA
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 479 ERKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FGLH-LFDPKA--INNEESDDLR 533
E KLRL V+ G +VD + + D++ +II FG + +F K I +E+ D +
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQ---LNKDEMLNIIRFGANQVFSSKETDITDEDIDVIL 626
Query: 534 LSGLNSMVEKVIAM 547
G E+ A+
Sbjct: 627 ERGEAKTAEQKAAL 640
>gi|384875322|gb|AFI26247.1| imitation SWI [Drosophila melanogaster]
gi|384875323|gb|AFI26248.1| imitation SWI [Drosophila melanogaster]
gi|384875324|gb|AFI26249.1| imitation SWI [Drosophila melanogaster]
Length = 1027
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 193/519 (37%), Positives = 282/519 (54%), Gaps = 75/519 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+
Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E K+ P L + +G+++ R R + + P +DV +
Sbjct: 185 PKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDV------------LMPGEWDVCV 232
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNN 291
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F F ++++ + T L +L F+LRR
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRL 344
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K ++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 345 KAEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQ 400
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ L
Sbjct: 401 LRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRML 460
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y+Y RLDG E+R I+ F++ ++ + F+FM+STRA
Sbjct: 461 DILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAK-----------FLFMLSTRA 509
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RA
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 479 ERKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FG 515
E KLRL V+ G +VD + + D++ +II FG
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQ---LNKDEMLNIIRFG 605
>gi|20151803|gb|AAM11261.1| RH13158p [Drosophila melanogaster]
Length = 1027
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 297/554 (53%), Gaps = 78/554 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+
Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E K+ P L + +G+++ R R + + P +DV +
Sbjct: 185 PKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDV------------LMPGEWDVCV 232
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNN 291
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F F ++++ + T L +L F+LRR
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRL 344
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K ++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 345 KAEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQ 400
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ L
Sbjct: 401 LRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRML 460
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y+Y RLDG E+R I+ F++ ++ + F+FM+STRA
Sbjct: 461 DILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAK-----------FLFMLSTRA 509
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RA
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 479 ERKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FGLH-LFDPKA--INNEESDDLR 533
E KLRL V+ G +VD + + D++ +II FG + +F K I +E+ D +
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQ---LNKDEMLNIIRFGANQVFSSKETDITDEDIDVIL 626
Query: 534 LSGLNSMVEKVIAM 547
G E+ A+
Sbjct: 627 ERGEAKTAEQKAAL 640
>gi|363749203|ref|XP_003644819.1| hypothetical protein Ecym_2256 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888452|gb|AET38002.1| Hypothetical protein Ecym_2256 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1058
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 190/519 (36%), Positives = 283/519 (54%), Gaps = 73/519 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V L+P+Q++GL+WL+ + + +L DEMGLGKTLQ I+FL YL++ + PGPFLV+
Sbjct: 134 VNGTLRPYQIQGLNWLVSLHKNQLAGILADEMGLGKTLQTIAFLGYLRYVEGKPGPFLVI 193
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ K+TP+++ G++++R + + + F+++
Sbjct: 194 APKSTLNNWLREIKKWTPEVDAFILQGDKDERAKMCQ------------ERLLACDFEIV 241
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ +I W Y +IDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 242 VASYEIIIKEKASFKKIDWEYVVIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 300
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTS-LKGILSAFMLR 271
NL ELWAL++F +P +F F F S+ G+ K+ L IL F+LR
Sbjct: 301 NLHELWALLNFLLPDIFSDSAAFDEWF-------SSETTGEDKDTIVKQLHTILQPFLLR 353
Query: 272 RTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLA 312
R K + L P E+ + +Q+K Y IL K++ +LL
Sbjct: 354 RIKNDV----ETSLLPKKELNLYVGMASMQRKWYKQILEKDIDAVNGANRSKESKTRLLN 409
Query: 313 LS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQM 354
+ + NH L + A S KL VLD LLKKL + G RVL+F+QM
Sbjct: 410 IMMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSAKLKVLDRLLKKLKSDGSRVLIFSQM 469
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
++ LDIL+D+ R Y Y R+DGS E+R AI ++ A + F+F++
Sbjct: 470 SRLLDILEDYCYFRGYEYCRIDGSTAHEDRIEAIDEYN-----------APESKKFIFLL 518
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
+TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I
Sbjct: 519 TTRAGGLGINLTTADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKI 578
Query: 475 MRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
+ RA +KLRL V+ KE D+L S+I
Sbjct: 579 LERATQKLRLDQLVIQQGRAGVLKKESAKGAKDELLSMI 617
>gi|71033631|ref|XP_766457.1| DNA-dependent ATPase [Theileria parva strain Muguga]
gi|68353414|gb|EAN34174.1| DNA-dependent ATPase, putative [Theileria parva]
Length = 1253
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 198/514 (38%), Positives = 286/514 (55%), Gaps = 76/514 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ + KP+Q+EGL WL+ Y+ G+N +L DEMGLGKT Q ISFL+YLK + GP +VL
Sbjct: 171 LVGQSKPYQIEGLKWLVGLYVKGLNGILADEMGLGKTFQTISFLAYLKETFSVHGPHMVL 230
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQR------------RNIRRTMYEHV-KEQS 139
P S W+SE+ +F P L VL+++G +E+R +I T YE K +
Sbjct: 231 APKSTIGNWISEIHRFCPSLRVLKFIGNKEERAQLIAYELDPEKYDIFVTSYETCCKAKG 290
Query: 140 QMSNVSPLPFDVLLTTYDVVLMDQG--FLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHF 197
+ N S F + + Y+ + + G FL ++ W Y IIDEA R+KN S L V+R F
Sbjct: 291 PLGNFSHY-FYLYNSHYNCLTLQYGLIFLGKLDWKYLIIDEAHRIKNEESKLSEVVR-LF 348
Query: 198 LMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIK-- 255
RLL+TGTP+QNNL ELWAL++F P VF + +F + F P+ + +
Sbjct: 349 KTEYRLLITGTPLQNNLKELWALLNFLFPVVFSSSEEFETVFDLVGPKELTPEERESRNL 408
Query: 256 EQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPK 309
+ L GIL FMLRR+K+ ++ +PP E+ + +QK++Y +LRK +P+
Sbjct: 409 QIVARLHGILRPFMLRRSKKDVLSD----MPPKNELLLMVPLSAMQKQLYRDLLRKNVPE 464
Query: 310 L----------------LALSSRTA-NHQSL-----------------QNTASGKLVVLD 335
L LA+ R A NH L QN SGKL ++D
Sbjct: 465 LGTDDSTKSGIHVQLLNLAMQLRKACNHPYLFEGYEDRNEDPFGEHVVQN--SGKLCLVD 522
Query: 336 LLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQS 395
L+ +L + R+L+F+QM + LDIL+D+ +R Y Y R+DG+ E+R I F+
Sbjct: 523 KLIPRLLGNSSRILIFSQMARMLDILEDYCRMRNYLYFRIDGNTSGEDRDYQISSFN--- 579
Query: 396 AIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQ 455
+ E+ N +F++STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ
Sbjct: 580 -----HPESKVN---IFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAIDRAHRIGQ 631
Query: 456 MNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
+ V LV ++T+EE I+ RA KL+L V+
Sbjct: 632 LKPVYVYRLVHQYTIEEKIIERATLKLQLDTAVI 665
>gi|403218419|emb|CCK72909.1| hypothetical protein KNAG_0M00560 [Kazachstania naganishii CBS
8797]
Length = 1058
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 192/520 (36%), Positives = 288/520 (55%), Gaps = 71/520 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ EL+ +QV+GL+WL+ + + +L DEMGLGKTLQ ISFL YL++ + GPFLV+
Sbjct: 136 IDGELRDYQVQGLNWLVALHKSELAGILADEMGLGKTLQTISFLGYLRYIEKKRGPFLVI 195
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ K+TP ++ G++++R + ++E+ + FDV+
Sbjct: 196 APKSTLNNWLREINKWTPGVDAFILQGDKDERSKL-------IQER-----LMTCKFDVV 243
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ + W Y +IDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 244 IASYEIIIREKASFRKFDWEYIMIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 302
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S + +K+ L +L F+LRR
Sbjct: 303 NLHELWALLNFLLPDIFSESQDFDDWFSSESSSDEKNQENIVKQ----LHTVLQPFLLRR 358
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K VE L P E+ V +QK+ Y +IL K+L +LL +
Sbjct: 359 IKSD-VETSLL---PKQELNVYVGMSAMQKRWYKNILEKDLDAVNGANGAKESKTRLLNI 414
Query: 314 S---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NH L + A S KL VLD LL+KL +G RVL+F+QM+
Sbjct: 415 VMQLRKCCNHPYLFDGAEPGPPYTTDEHLVFNSEKLRVLDTLLRKLRENGSRVLIFSQMS 474
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ R Y Y R+DGS E+R AI ++ A + F+F+++
Sbjct: 475 RVLDILEDYCYFRDYEYCRIDGSTAHEDRIEAIDEYN-----------APDSKKFIFLLT 523
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V VT+++VEE I+
Sbjct: 524 TRAGGLGINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDNSVEEKIL 583
Query: 476 RRAERKLRLSHNVVGDD--VVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + ++++ KE D L S+I
Sbjct: 584 ERATQKLRLDQLVIQHNKTSLNKQKKENKNEAKDALLSMI 623
>gi|115727572|ref|XP_788696.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 isoform 2
[Strongylocentrotus purpuratus]
gi|390338037|ref|XP_003724706.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5
[Strongylocentrotus purpuratus]
Length = 1019
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 273/499 (54%), Gaps = 72/499 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ ++ E++ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 127 ESPKYIKNGEMRDYQVRGLNWLISLYEHGINGILADEMGLGKTLQTISLLGYMKHYRHIP 186
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
P L++CP S W++E ++ P L + +G ++QR R + + P
Sbjct: 187 SPHLIICPKSTLANWMAECERWCPSLRAVCLIGNQDQRSAFIRDV------------MMP 234
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++ + ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 235 GEWDVCITSYEMAIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 293
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGI 264
GTP+QNNL ELWAL++F +P VF + F + F +D + +S T L +
Sbjct: 294 GTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFSTQDCLGDNSL---------VTRLHAV 344
Query: 265 LSAFMLRRTKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKE------------- 306
L F+LRR K E +LP ++++Q++ Y IL K+
Sbjct: 345 LRPFLLRRLKS---EVEKALLPKKETKMYVGMSIMQREWYTKILMKDIDVVNGAGKSDKM 401
Query: 307 -LPKLLALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
L +L + NH L + A SGK+ VLD LL KL G RVL+
Sbjct: 402 RLMNILMHLRKCGNHPYLFDGAEPGPPYTTDKHLVENSGKMSVLDKLLPKLKEQGSRVLI 461
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LDIL+D+ R ++Y RLDG ER +I +F++ + + F
Sbjct: 462 FSQMTRLLDILEDYCVWRGHNYCRLDGQTPHAERQESINNFNMPDS-----------EKF 510
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF++STRAGG+G+NL AD V+ Y+ DWNPQVD QA+ RAHRIGQ V ++E+TV
Sbjct: 511 VFLLSTRAGGLGINLATADIVVLYDSDWNPQVDLQAMDRAHRIGQKKQVHVFRFISENTV 570
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE I+ RAE KLRL + V+
Sbjct: 571 EERIVERAEMKLRLDNIVI 589
>gi|392574038|gb|EIW67175.1| hypothetical protein TREMEDRAFT_69728 [Tremella mesenterica DSM
1558]
Length = 1260
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/488 (40%), Positives = 272/488 (55%), Gaps = 70/488 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELKP Q+ GL+WL + G N +L DEMGLGKT+Q++SFLSYL +Q GPFLV+ P
Sbjct: 224 GELKPFQLTGLNWLAYLWCKGENGILADEMGLGKTVQSVSFLSYLFHTQHQYGPFLVVVP 283
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W S+ + P L V+ Y+G R IR Q++ + L F+VLLT
Sbjct: 284 LSTISAWQSQFRIWAPDLNVVSYMGSAASREVIR---------QTEFGPLRALRFNVLLT 334
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L QI W +DEA RLKN S LY L+ F RLL+TGTP+QNN+
Sbjct: 335 TYEFILKDRADLGQIKWQALAVDEAHRLKNHESQLYEALKS-FSTASRLLITGTPLQNNV 393
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL ALMHF MP F N F T D + KIK+ L L MLRR K
Sbjct: 394 KELLALMHFLMPERFQLANDFDLTDVD--------QEAKIKD----LHEKLGTLMLRRLK 441
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYA----SILRKELPKLLALSS------RTA 318
+ +V+ LP + E++ +Q Y ++L K + ++L + + +
Sbjct: 442 KDVVK----ELPTKSEKILRVELSPMQTHYYKITNFAVLSKGGTQQVSLMNIAMELKKAS 497
Query: 319 NHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L + A SGK+V+LD LL +L GHRVL+F+QM + LDI+
Sbjct: 498 NHPYLFDGAEDRSKSIHEILRGLVMNSGKMVLLDKLLTRLKADGHRVLIFSQMVRLLDII 557
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
D+L R Y ++RLDG++ ++ R +I HF+ A G+ F F++STRAGG+
Sbjct: 558 SDYLSARGYVFQRLDGTVPSDVRKKSIEHFN-----------APGSPDFAFLLSTRAGGL 606
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI ++ D+NPQ D QA+ RAHRIGQ HV V++ T+EE I+ RA RK
Sbjct: 607 GINLETADTVIIFDSDYNPQNDLQAMARAHRIGQQRHVSIYRFVSKGTIEEDILERARRK 666
Query: 482 LRLSHNVV 489
+ L + ++
Sbjct: 667 MILEYAII 674
>gi|395545881|ref|XP_003774825.1| PREDICTED: probable global transcription activator SNF2L1
[Sarcophilus harrisii]
Length = 1004
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/490 (39%), Positives = 265/490 (54%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +QV GL+W+I Y GVN +L DEMGLGKTLQ IS L YLK + GP +VL P S
Sbjct: 123 LRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTISLLGYLKHYRNVVGPHMVLVPKS 182
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W+SE ++ P ++ + +GERE R R + P ++V +T+Y
Sbjct: 183 TLHNWMSEFKRWVPSIQAVCLIGERETRATFIR------------DTIIPGEWEVCVTSY 230
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 231 EMVIKERALFKRFNWHYLVIDEAHRIKNEKSKLSEIIRE-FKTTNRLLLTGTPLQNNLHE 289
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + F S F K+ + +R L +L F+LRR K
Sbjct: 290 LWALLNFLLPDVFNSSEDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 340
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS------------- 315
++ LPP E+ + +Q++ Y IL K++ L ++
Sbjct: 341 AEV----ERTLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSVGKTDKMRLLNILMQL 396
Query: 316 -RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL KL RVL+F+QMT+ LD
Sbjct: 397 RKCCNHPYLFDGAEPGPPYTTDAHIVNNSGKMVALDKLLAKLKEQESRVLIFSQMTRLLD 456
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG ER AI F+ A + F+FM+STRAG
Sbjct: 457 ILEDYCMWRGYEYCRLDGQTPHGEREEAIEVFN-----------APNSTKFIFMLSTRAG 505
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVE+ I+ RAE
Sbjct: 506 GLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEDRIVERAE 565
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 566 IKLRLDSIVI 575
>gi|300175679|emb|CBK21222.2| unnamed protein product [Blastocystis hominis]
Length = 523
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 282/487 (57%), Gaps = 65/487 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +Q++ L+WL+ ++ LG+N +L DEMGLGKTL+ IS L +LK GP L+L P S
Sbjct: 1 MRSYQIDALNWLLHQHQLGLNSILADEMGLGKTLETISLLGFLKQYLSISGPHLILVPKS 60
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
WV+E+ KF P L VLR+ G +E+R +++ + E K++S +DVL+TTY
Sbjct: 61 TLGNWVNEIQKFCPSLRVLRFHGTKEERIDLKPMVRE--KDRS---------WDVLITTY 109
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ ++++G + W Y +IDEA RLKN +S L VLR+ F + RLL+TGTP+QNNL E
Sbjct: 110 EMCVIEKGLFQSVDWNYLVIDEAHRLKNENSKLSLVLRQ-FSVKNRLLLTGTPLQNNLHE 168
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F MP +FG+ + F F +S K I++ L +L FMLRR K
Sbjct: 169 LWALLNFLMPEIFGSQSVFHDMFNLEEDASLQQKEQMIQQ----LHQVLEPFMLRRLKSD 224
Query: 277 LVECGHLMLPPLTE------ITVLQKKVYASIL-------------RKELPKLLALSSRT 317
+ LPP E ++ +QK++Y +L R L LL +
Sbjct: 225 VEHS----LPPKIETILYVGMSSMQKELYKKVLVNDYESIVNSRAERSHLLNLLMQLRKV 280
Query: 318 ANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
A H L T GK+V+LD LLK+L G RVLLF+QM + LDIL+
Sbjct: 281 AGHPYLFEGVEDRSLDPMGEHVITNCGKMVLLDKLLKRLKEKGSRVLLFSQMRRVLDILE 340
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
D+ +R + Y R+DGS + +R I F+ +++ + FVF++STRAGG+G
Sbjct: 341 DYCNIRGFEYCRIDGSTESVDREEEINSFNAENSTK-----------FVFLLSTRAGGLG 389
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
+NL ADTVI Y+ DWNPQ+D QA RAHRIGQ V LVTE TVEE+I+ RA+ KL
Sbjct: 390 INLATADTVILYDSDWNPQMDLQAEDRAHRIGQKKTVNVYRLVTEGTVEEMIVERAKLKL 449
Query: 483 RLSHNVV 489
RL V+
Sbjct: 450 RLDTLVI 456
>gi|193596661|ref|XP_001945595.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Acyrthosiphon pisum]
Length = 1048
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 188/492 (38%), Positives = 273/492 (55%), Gaps = 72/492 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
EL+ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 157 NGELRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVIV 216
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQR-RNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S WV+E K+ P + + +G+R+ R + IR T P +DV
Sbjct: 217 PKSTLQNWVNEFKKWCPTIRTVCMIGDRDTRVKFIRETFI-------------PGDWDVC 263
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++++ ++ L +I W Y +IDEA R+KN S L ++RE F RLL+TGTP+QN
Sbjct: 264 ITSYEMIIRERAVLRKIQWRYLVIDEAHRIKNEKSKLSEIIRE-FETTNRLLLTGTPLQN 322
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF + + F F ++++ + E+ L +L F+LRR
Sbjct: 323 NLHELWALLNFLLPDVFNSSDDFDQWF----NTNNCFGDNALIER---LHAVLRPFLLRR 375
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLA 312
K ++ + L P E+ V LQ++ Y +L K+ L +L
Sbjct: 376 LKSEVEK----RLKPKKEVKVYVGLSKLQREWYTKVLMKDIDVVNGAGKVEKMRLQNILM 431
Query: 313 LSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ +NH L + A GK+VV D LLK L RVL+F+QMT+
Sbjct: 432 QLRKCSNHPYLFDGAEPGPPYTTDEHIVFNCGKMVVFDKLLKALKEQDSRVLVFSQMTRM 491
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
+DIL+D++ + Y+Y RLDG E+R I ++ ++ FVF++STR
Sbjct: 492 MDILEDYMHWKGYNYCRLDGQTPHEDRQRQINEYNEPNS-----------KKFVFILSTR 540
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE+TVEE I+ R
Sbjct: 541 AGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVER 600
Query: 478 AERKLRLSHNVV 489
AE KLRL V+
Sbjct: 601 AEVKLRLDKLVI 612
>gi|300122317|emb|CBK22889.2| unnamed protein product [Blastocystis hominis]
Length = 698
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 281/487 (57%), Gaps = 65/487 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +Q++ L+WL+ ++ LG+N +L DEMGLGKTL+ IS L +LK GP L+L P S
Sbjct: 1 MRSYQIDALNWLLHQHQLGLNSILADEMGLGKTLETISLLGFLKQYLSISGPHLILVPKS 60
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
WV+E+ KF P L VLR+ G +E+R +++ + E K++S +DVL+TTY
Sbjct: 61 TLGNWVNEIQKFCPSLRVLRFHGTKEERIDLKPMVRE--KDRS---------WDVLITTY 109
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ ++++G + W Y +IDEA RLKN +S L VLR F + RLL+TGTP+QNNL E
Sbjct: 110 EMCVIEKGLFQSVDWNYLVIDEAHRLKNENSKLSLVLR-RFSVKNRLLLTGTPLQNNLHE 168
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F MP +FG+ + F F +S K I++ L +L FMLRR K
Sbjct: 169 LWALLNFLMPEIFGSQSVFHDMFNLEEDASLQQKEQMIQQ----LHQVLEPFMLRRLKSD 224
Query: 277 LVECGHLMLPPLTE------ITVLQKKVYASIL-------------RKELPKLLALSSRT 317
+ LPP E ++ +QK++Y +L R L LL +
Sbjct: 225 VEHS----LPPKIETILYVGMSSMQKELYKKVLVNDYESIVNSRAERSHLLNLLMQLRKV 280
Query: 318 ANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
A H L T GK+V+LD LLK+L G RVLLF+QM + LDIL+
Sbjct: 281 AGHPYLFEGVEDRSLDPMGEHVITNCGKMVLLDKLLKRLKEKGSRVLLFSQMRRVLDILE 340
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
D+ +R + Y R+DGS + +R I F+ +++ + FVF++STRAGG+G
Sbjct: 341 DYCNIRGFEYCRIDGSTESVDREEEINSFNAENSTK-----------FVFLLSTRAGGLG 389
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
+NL ADTVI Y+ DWNPQ+D QA RAHRIGQ V LVTE TVEE+I+ RA+ KL
Sbjct: 390 INLATADTVILYDSDWNPQMDLQAEDRAHRIGQKKTVNVYRLVTEGTVEEMIVERAKLKL 449
Query: 483 RLSHNVV 489
RL V+
Sbjct: 450 RLDTLVI 456
>gi|407926482|gb|EKG19449.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 1597
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 212/583 (36%), Positives = 307/583 (52%), Gaps = 87/583 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ +L+ Q+ G+S+L + G N +L DEMGLGKT+Q +SF+++L+ + GPF
Sbjct: 449 EYIKFGQLRDFQLRGVSFLAYHWCKGDNAILADEMGLGKTVQTVSFMNWLRHDRGQQGPF 508
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
+V+ PLS W + P + + Y G R+ IR YE + + N F
Sbjct: 509 VVVVPLSTLPAWAETFDNWAPDMNYVVYNGNEASRKIIRE--YEMLVD----GNPKRTKF 562
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
VLLTTY+ VL D FLSQI W + +DEA RLKN S LY L + F P RLL+TGTP
Sbjct: 563 HVLLTTYEFVLADSTFLSQIKWQFMAVDEAHRLKNRESQLYAKLMD-FGAPSRLLITGTP 621
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QN L EL ALM F MP + + + S KI E L +S +M
Sbjct: 622 MQNTLGELSALMDFIMPGMI--------EVDENIDLQSETASQKIAE----LTNAISPYM 669
Query: 270 LRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKEL---------PKLLALS 314
+RRTKQK+ LPP T E++ LQ + Y +IL + PK L+
Sbjct: 670 IRRTKQKVEND----LPPKTEKIIRVELSDLQLEYYKNILTRNYAALNQNGKGPKQSLLN 725
Query: 315 -----SRTANH-------------------QSLQN--TASGKLVVLDLLLKKLYNSGHRV 348
+ +NH + L+ T+SGK+++LD LL KL HRV
Sbjct: 726 IMMELKKASNHPYMFPGAEERMLAGNYRREEQLKALVTSSGKMMLLDRLLTKLKKDNHRV 785
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL D+L+LR Y ++RLDG+I + +R AI HF+ Q + +
Sbjct: 786 LVFSQMVKMLDILGDYLQLRGYQFQRLDGTITSGQRRQAIDHFNAQDSQD---------- 835
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ N V LV++
Sbjct: 836 -FCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQKNPVTVYRLVSKD 894
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVDREVKE------RTAVE---TDDLRSII--FGLH 517
TVEE ++ RA KL L + + V D+ KE R E +DD+ I+ G
Sbjct: 895 TVEEEVLERARNKLMLEYITIQRAVTDKGDKEAFDRAARAVAEPTSSDDINRILKKRGQK 954
Query: 518 LFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKF 560
+F+ + N ++ ++L + + E+ + E ++ G +F
Sbjct: 955 MFE-QTGNQKKLEELDIDAVLENAEEHKTEQPEGITTDGGEEF 996
>gi|121708636|ref|XP_001272197.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1]
gi|119400345|gb|EAW10771.1| SNF2 family helicase/ATPase, putative [Aspergillus clavatus NRRL 1]
Length = 1121
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/544 (35%), Positives = 290/544 (53%), Gaps = 81/544 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ E++ +QV GL+WL+ + G++ +L DEMGLGKTLQ ISFL YL+ GP LV
Sbjct: 193 IHGEMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYLRHVCDITGPHLVA 252
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E K+TP++ VL G++E+R + + E + ++ FDV
Sbjct: 253 VPKSTLDNWKREFHKWTPEVNVLVLQGDKEERHKL---INERLLDED---------FDVC 300
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++VL ++ L + W Y IIDEA R+KN S L ++R F RLL+TGTP+QN
Sbjct: 301 ITSYEMVLREKAHLKKFAWEYIIIDEAHRIKNEESSLAQIIR-VFNSRNRLLITGTPLQN 359
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VFG F F + + G L +L F+LRR
Sbjct: 360 NLHELWALLNFLLPDVFGDSEAFDQWF--------SGQDGDQDTVVQQLHRVLRPFLLRR 411
Query: 273 TKQKLVECGHLMLP--------PLTEITVLQKKVYASILRKELPKLLALSS--------- 315
K + + +LP P++E +Q K Y IL K++ + +
Sbjct: 412 VKSDVEKS---LLPKKEVNLYVPMSE---MQIKWYQKILEKDIDAVNGAAGKRESKTRLL 465
Query: 316 -------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L A SGK+V+LD LL ++ G RVL+F+Q
Sbjct: 466 NIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMVILDKLLARMQRQGSRVLIFSQ 525
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R Y Y R+DG+ E+R AAI ++ G++ F+F+
Sbjct: 526 MSRVLDILEDYCVFRDYKYCRIDGTTAHEDRIAAIDDYN-----------KPGSEKFIFL 574
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ +TE +EE
Sbjct: 575 LTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVFRFITEDAIEEK 634
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII--FGLHLFDPKAINNEESDD 531
++ RA +KLRL V+ ++VK A D+L +I ++F+ K + S+D
Sbjct: 635 VLERAAQKLRLDQLVIQQGRAQQQVK--NAASKDELLGMIQHGAANVFNTKGATSTLSND 692
Query: 532 LRLS 535
+LS
Sbjct: 693 KQLS 696
>gi|119173796|ref|XP_001239291.1| hypothetical protein CIMG_10313 [Coccidioides immitis RS]
gi|392869498|gb|EJB11843.1| chromodomain helicase [Coccidioides immitis RS]
Length = 1520
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 208/539 (38%), Positives = 290/539 (53%), Gaps = 80/539 (14%)
Query: 6 RLQVAAKIIHDNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEM 64
R V++++ + R P+ +F +LK QV+G++++ ++ G NV+L DEM
Sbjct: 434 RPPVSSRLESNQSTRSAFEPIHGTPDFVCNGQLKDFQVKGVNFMAYNWVRGRNVVLADEM 493
Query: 65 GLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQR 124
GLGKT+Q ++F+++L+ + GPF+V+ PLS W +TP L + Y G E
Sbjct: 494 GLGKTVQTVTFINWLRHVRNQQGPFIVVVPLSTMPSWAETFDYWTPDLNYVVYSGN-EAS 552
Query: 125 RNIRRTMYEHVKEQSQM--SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRL 182
RNI +KE + N+ F VLLTTY+ VL+D FLSQI W + +DEA RL
Sbjct: 553 RNI-------IKEYELLVDGNIKRPKFHVLLTTYEYVLVDASFLSQIKWQFLAVDEAHRL 605
Query: 183 KNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDA 242
KN S LY L E F P RLL+TGTP+QNNL EL ALM F LN L +
Sbjct: 606 KNRDSQLYAKLVE-FKSPSRLLITGTPVQNNLGELSALMDF--------LNPGLIEIDEN 656
Query: 243 VHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLT------EITVLQK 296
+ SS K+ E L + FMLRRTK K VE LPP + E++ +Q
Sbjct: 657 MDLSSEAASVKLAE----LTKAIQPFMLRRTKSK-VESD---LPPKSEKIIRVELSDVQL 708
Query: 297 KVYASILRK---------------------ELPK--------------LLALSSRTANHQ 321
+ Y +IL K EL K +L S+R +
Sbjct: 709 EYYKNILTKNYAALNQGAKGQKQSLLNIMMELKKASNHPFMFANAEDRILQGSTRREDAL 768
Query: 322 SLQNTASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRA 381
T+SGK+++LD LL KL N GHRVL+F+QM + LDIL D+++ R ++Y+RLDG+I A
Sbjct: 769 RALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMVRMLDILADYMDARGFAYQRLDGTIAA 828
Query: 382 EERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQ 441
R +I HF+ + + F F++STRAGG+G+NL+ ADTVI ++ DWNPQ
Sbjct: 829 GPRRLSIEHFNAPDSTD-----------FAFLLSTRAGGLGINLMTADTVILFDSDWNPQ 877
Query: 442 VDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
D QA+ RAHRIGQ V LV++ TVEE ++ RA KL L + V D+E E
Sbjct: 878 ADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEATE 936
>gi|20152037|gb|AAM11378.1| LD39323p [Drosophila melanogaster]
Length = 1101
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 216/580 (37%), Positives = 309/580 (53%), Gaps = 87/580 (15%)
Query: 42 VEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPLSVTDG 100
++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PLS
Sbjct: 1 MDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLY-GPFLCVVPLSTMTA 59
Query: 101 WVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVL 160
W E + P + V+ Y+G+ + R I++ YE E S+ L F+ +LTTY++VL
Sbjct: 60 WQREFDLWAPDMNVVTYLGDIKSRELIQQ--YEWQFESSKR-----LKFNCILTTYEIVL 112
Query: 161 MDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWAL 220
D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L ELWAL
Sbjct: 113 KDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLKELWAL 171
Query: 221 MHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVEC 280
+HF MP F T F V +A +G +T L L ++LRR K+ + +
Sbjct: 172 LHFIMPDKFDTWENF------EVQHGNAEDKG-----YTRLHQQLEPYILRRVKKDVEKS 220
Query: 281 GHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTANHQSL- 323
+ + E+T LQK+ Y IL K L + NH +L
Sbjct: 221 LPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCNHAALI 280
Query: 324 -----------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFL 365
Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+L D+L
Sbjct: 281 RPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYL 340
Query: 366 ELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNL 425
+ R + ++RLDGSI+ E R A+ HF+ A G+ F F++STRAGG+G+NL
Sbjct: 341 QKRHFPFQRLDGSIKGEMRRQALDHFN-----------AEGSQDFCFLLSTRAGGLGINL 389
Query: 426 VAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLS 485
ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++K+ L
Sbjct: 390 ATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQKMVLD 449
Query: 486 HNVV------GDDVVDREVKERTA----VETDDLRSII-FGL-HLFDPKAINNEESDDLR 533
H V+ G V+D+ ++ DDL +I+ FG LF + +E DD
Sbjct: 450 HLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFK----DEQEHDDDL 505
Query: 534 LSGLNSMVEKVIAMRHEQVSGKAG---RKFEVNPVALLEE 570
+ ++ ++ + R+E A F+V +A EE
Sbjct: 506 VCDIDEILRRA-ETRNEDPEMPADDLLSAFKVASIAAFEE 544
>gi|432950977|ref|XP_004084701.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Oryzias latipes]
Length = 996
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 189/498 (37%), Positives = 275/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +++ +QV GL+WLI Y G+N +L DEMGLGKTLQ I+ L Y+K + P
Sbjct: 156 DSPSYVKAGKMRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTIALLGYMKHYRNIP 215
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W++E ++ P L + +G+R +R + R + + P
Sbjct: 216 GPHMVLVPKSTLYNWMNEFKRWVPSLRAVCLIGDRNERTALIRDV------------LLP 263
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y+++++++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 264 GEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 322
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P VF + F S F +++ K+ E+ L +L
Sbjct: 323 GTPLQNNLHELWALLNFLLPDVFNSSEDFDSWF----DTNNCLGDQKLVER---LHTVLR 375
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKL---------- 310
F+LRR K + + L P E+ + +Q++ Y IL K++ L
Sbjct: 376 PFLLRRIKADVEKT----LLPKKEVKIYVGLSKMQREWYTKILMKDIDILNSAGKMDKMR 431
Query: 311 ----LALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLF 351
L + NH L + A SGK+VVLD LL K+ G RVL+F
Sbjct: 432 LLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMVVLDKLLPKMKVQGSRVLIF 491
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG EER +I ++ ++ + F+
Sbjct: 492 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQISINAYNEPNSTK-----------FI 540
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +TE+TVE
Sbjct: 541 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVE 600
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 601 ERIVERAEMKLRLDSIVI 618
>gi|303324465|ref|XP_003072220.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111930|gb|EER30075.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320037260|gb|EFW19198.1| chromodomain helicase hrp1 [Coccidioides posadasii str. Silveira]
Length = 1520
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 208/539 (38%), Positives = 290/539 (53%), Gaps = 80/539 (14%)
Query: 6 RLQVAAKIIHDNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEM 64
R V++++ + R P+ +F +LK QV+G++++ ++ G NV+L DEM
Sbjct: 434 RPPVSSRLESNQSTRSAFEPIHGTPDFVCNGQLKDFQVKGVNFMAYNWVRGRNVVLADEM 493
Query: 65 GLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQR 124
GLGKT+Q ++F+++L+ + GPF+V+ PLS W +TP L + Y G E
Sbjct: 494 GLGKTVQTVTFINWLRHVRNQQGPFIVVVPLSTMPSWAETFDYWTPDLNYVVYSGN-EAS 552
Query: 125 RNIRRTMYEHVKEQSQM--SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRL 182
RNI +KE + N+ F VLLTTY+ VL+D FLSQI W + +DEA RL
Sbjct: 553 RNI-------IKEYELLVDGNIKRPKFHVLLTTYEYVLVDASFLSQIKWQFLAVDEAHRL 605
Query: 183 KNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDA 242
KN S LY L E F P RLL+TGTP+QNNL EL ALM F LN L +
Sbjct: 606 KNRDSQLYAKLVE-FKSPSRLLITGTPVQNNLGELSALMDF--------LNPGLIEIDEN 656
Query: 243 VHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLT------EITVLQK 296
+ SS K+ E L + FMLRRTK K VE LPP + E++ +Q
Sbjct: 657 MDLSSEAASVKLAE----LTKAIQPFMLRRTKSK-VESD---LPPKSEKIIRVELSDVQL 708
Query: 297 KVYASILRK---------------------ELPK--------------LLALSSRTANHQ 321
+ Y +IL K EL K +L S+R +
Sbjct: 709 EYYKNILTKNYAALNQGAKGQKQSLLNIMMELKKASNHPFMFANAEDRILQGSTRREDAL 768
Query: 322 SLQNTASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRA 381
T+SGK+++LD LL KL N GHRVL+F+QM + LDIL D+++ R ++Y+RLDG+I A
Sbjct: 769 RALITSSGKMMLLDQLLAKLKNDGHRVLIFSQMVRMLDILADYMDARGFAYQRLDGTIAA 828
Query: 382 EERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQ 441
R +I HF+ + + F F++STRAGG+G+NL+ ADTVI ++ DWNPQ
Sbjct: 829 GPRRLSIEHFNAPDSTD-----------FAFLLSTRAGGLGINLMTADTVILFDSDWNPQ 877
Query: 442 VDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
D QA+ RAHRIGQ V LV++ TVEE ++ RA KL L + V D+E E
Sbjct: 878 ADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEATE 936
>gi|428673166|gb|EKX74079.1| helicase family member protein [Babesia equi]
Length = 932
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/493 (38%), Positives = 275/493 (55%), Gaps = 70/493 (14%)
Query: 38 KPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSV 97
KP+Q+EGL WL+ + G+N +L DEMGLGKT Q IS ++YLK S GP LVL P S
Sbjct: 107 KPYQLEGLRWLVGLHNKGLNGILADEMGLGKTFQTISLMAYLKESCGIDGPHLVLAPKST 166
Query: 98 TDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYD 157
W++E+ +F P L VL+++G +E+R + + K +DV++T+Y+
Sbjct: 167 IGNWINEINRFCPSLRVLKFIGNKEERAYLINNELDQDK------------YDVIVTSYE 214
Query: 158 VVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSEL 217
+ L ++ W Y IIDEA R+KN S L V+R F RLL+TGTP+QNNL EL
Sbjct: 215 TCCKTKRALCKLDWKYIIIDEAHRIKNEESKLSEVVR-MFQTEYRLLITGTPLQNNLKEL 273
Query: 218 WALMHFCMPSVFGTLNQFLSTFKDAVHS---SSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
WAL++F P VF + +F F D V + A + + + L IL FMLRR+K
Sbjct: 274 WALLNFLFPEVFASSEEFEQVF-DLVGPKELTQAERESRNLQIIARLHEILRPFMLRRSK 332
Query: 275 QKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKL----------------LA 312
+ ++ +PP E+ + +QK++Y +LRK +P+L LA
Sbjct: 333 KDVL----TEMPPKNELLLMVPLSAMQKQLYRDLLRKNVPELGAEDNTKSGLQVQLLNLA 388
Query: 313 LSSRTA-NHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ R A NH L + +GKL ++D LL +L S R+L+F+QM +
Sbjct: 389 MQLRKACNHPYLFDGYEDRNDDPFGEHLVENAGKLNLVDKLLHRLLKSNSRILIFSQMAR 448
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ +R Y Y R+DG+ +E+R I F+ A ++ +F++ST
Sbjct: 449 MLDILEDYCRMRGYLYFRIDGNTSSEDRDHQISSFN-----------APDSEVSIFLLST 497
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ+ V LV E+T+EE I+
Sbjct: 498 RAGGLGINLATADVVILYDSDWNPQVDLQAIDRAHRIGQLKPVHVYRLVHEYTIEEKIIE 557
Query: 477 RAERKLRLSHNVV 489
RA KL+L V+
Sbjct: 558 RATLKLQLDSAVI 570
>gi|336384082|gb|EGO25230.1| hypothetical protein SERLADRAFT_361029 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1260
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/494 (39%), Positives = 269/494 (54%), Gaps = 74/494 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + G N +L DEMGLGKT+Q ++F+SYL GPFLV+ P
Sbjct: 206 GELKDFQLTGLNWLAYLWSKGENGILADEMGLGKTVQTVAFISYLFHEMHQYGPFLVIVP 265
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W ++ A + P + V+ Y+G R IR YE + L +VLLT
Sbjct: 266 LSTITAWQTQFAAWAPDINVITYIGTAAAREVIR--TYEFGPSNKR------LKMNVLLT 317
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++ L D L+ I W +DEA RLKN S LY LR F +LL+TGTP+QNN+
Sbjct: 318 TYELTLRDAKDLADIKWHALAVDEAHRLKNSESQLYEALRS-FSAASKLLITGTPLQNNV 376
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F N+F DA H + KIKE L L + MLRR K
Sbjct: 377 KELLSLMHFLMPEKFALSNEF--DLNDADHEA------KIKE----LHEQLESLMLRRLK 424
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ ++ LP +E ++ LQ Y +IL K L+ ++
Sbjct: 425 RDVLTS----LPTKSERILRVEMSALQTHFYKNILTKNFQGLIKSANGNNNISLLNIAME 480
Query: 316 --RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L + A SGK+V+LD L+ +L GHRVL+F+QM +
Sbjct: 481 LKKAANHPYLFDGAEVRTDNSEETLKGLVMNSGKMVLLDKLMVRLRQDGHRVLIFSQMVR 540
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++ LR Y ++RLDG + +E R +I HF+ A G+ F F++ST
Sbjct: 541 MLDILSDYMSLRGYQHQRLDGMVASEARKKSIAHFN-----------APGSPDFAFLLST 589
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE ++
Sbjct: 590 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLE 649
Query: 477 RAERKLRLSHNVVG 490
RA++K+ L + ++
Sbjct: 650 RAKKKMVLEYAIIN 663
>gi|410074857|ref|XP_003955011.1| hypothetical protein KAFR_0A04410 [Kazachstania africana CBS 2517]
gi|372461593|emb|CCF55876.1| hypothetical protein KAFR_0A04410 [Kazachstania africana CBS 2517]
Length = 1085
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/491 (36%), Positives = 276/491 (56%), Gaps = 63/491 (12%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+ +QV+GL+WL+ + G+ +L DEMGLGKTLQ ++FL YLK+ + GPFLV+
Sbjct: 125 VNGKLRSYQVQGLNWLVSLHNDGLAGILADEMGLGKTLQTVAFLGYLKYIENIDGPFLVI 184
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP+++ G++E+R+ + +T + P FD++
Sbjct: 185 APKSTLNNWLREINRWTPEVDAFVLQGDKEERQEMIKT------------KLLPCDFDIV 232
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ + W Y +IDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 233 IASYEIIIREKSAFKKFNWEYIVIDEAHRIKNEESMLSQVLRE-FTSKNRLLITGTPLQN 291
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F ++ + +K+ L IL F+LRR
Sbjct: 292 NLHELWALLNFLLPDIFSNSQDFDEWFSSEGSNNEENQELIVKQ----LHTILQPFLLRR 347
Query: 273 TKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL-------------PKLLALS-- 314
K VE L L ++ +QKK Y IL K++ +LL +
Sbjct: 348 IKSD-VETSLLPKKELNLYVGMSSMQKKWYRQILEKDIDAVNGSNGNKESKTRLLNIVMQ 406
Query: 315 -SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A S KL VLD LL K+ G RVL+F+QM++ L
Sbjct: 407 LRKCCNHPYLFDGAEPGPPYTTDEHLVYNSAKLKVLDKLLTKMKMEGSRVLIFSQMSRLL 466
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y Y R+DGS E+R +I ++ A ++ F+F+++TRA
Sbjct: 467 DILEDYCFFRGYQYCRIDGSTDHEDRIRSIDEYN-----------APDSEKFLFLLTTRA 515
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V VT+++VEE I+ RA
Sbjct: 516 GGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDNSVEEKILERA 575
Query: 479 ERKLRLSHNVV 489
+KL+L V+
Sbjct: 576 TQKLKLDQLVI 586
>gi|326426828|gb|EGD72398.1| chromodomain helicase DNA binding protein 1 [Salpingoeca sp. ATCC
50818]
Length = 1534
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 196/530 (36%), Positives = 289/530 (54%), Gaps = 83/530 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++G+SWL R + G +V+L DEMGLGKT+Q+I FLSYL Q GPFL++ PLS
Sbjct: 583 LRDYQLQGVSWLARSWCDGNSVILADEMGLGKTIQSIVFLSYLFNVQRVYGPFLIVVPLS 642
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E+ K+ P + + YVG + R IR + ++ + F+VLLTTY
Sbjct: 643 TIMAWSRELHKWAPAMNTIVYVGNKASREAIRDHEF--------YNDRGKIKFNVLLTTY 694
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL---REHFLMPRRLLMTGTPIQNN 213
+ V + L QI W ++DEA RLKN S+L+ L R F RLL+TGTP+QN+
Sbjct: 695 EKVNTNLDDLQQIRWAALVVDEAHRLKNHESMLHQALSDLRHDF----RLLVTGTPLQNS 750
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ ELWAL+HF MP F + +F + ++A + +L + +++RR
Sbjct: 751 MKELWALLHFIMPRTFASWEEFEERYGGLGDDAAANHK-----MLQTLHEDIKPYLIRRV 805
Query: 274 KQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------ 315
K+ + + LP E ++ QK++Y I+ K L +L
Sbjct: 806 KKDVEKS----LPKKVEKILRVGLSQSQKQIYKHIITKNYTALRSLKKGQKSSLVNVIME 861
Query: 316 --RTANHQSLQNTA-------------------SGKLVVLDLLLKKLYNSGHRVLLFAQM 354
+ NH SL + A SGKL++LD LL++L++ GHRVL+F+QM
Sbjct: 862 LKKCCNHASLIDQAPLSNPDVSPTENMRNLLKGSGKLILLDKLLQRLHDKGHRVLIFSQM 921
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
LD+L +L ++ Y ++RLDG+I E R AI HF+ A G+ F F++
Sbjct: 922 VLMLDVLATYLMMKGYPFQRLDGNIPNERRKQAIDHFN-----------APGSADFCFIL 970
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STRAGG+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ V V+++TVEE I
Sbjct: 971 STRAGGLGVNLATADTVIIFDSDWNPQNDLQAQARAHRIGQTRQVNIYRFVSKNTVEEDI 1030
Query: 475 MRRAERKLRLSHNVV------GDDVVDREVKERTAVE--TDDLRSII-FG 515
+ RA++K+ L H V+ G V++ + K+ VE ++L +II FG
Sbjct: 1031 LERAKKKMVLDHLVIQRMDTTGSSVLNLQKKKSGGVEYNKEELDAIIKFG 1080
>gi|395332947|gb|EJF65325.1| hypothetical protein DICSQDRAFT_79369 [Dichomitus squalens LYAD-421
SS1]
Length = 1441
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 194/493 (39%), Positives = 272/493 (55%), Gaps = 74/493 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + G N +L DEMGLGKT+Q++SFLSYL + GPFLV+ P
Sbjct: 383 GELKDFQLTGLNWLAYLWSKGENGILADEMGLGKTVQSVSFLSYLFHERRQYGPFLVIVP 442
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W S+ A + P L V+ Y+G R R+ YE + L +VLLT
Sbjct: 443 LSTITAWQSQFATWAPDLHVVTYIGSAAARAVARK--YEFGPSSKK------LKMNVLLT 494
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++ L D L +I W ++DEA RLKN S LY LR F ++L+TGTP+QNN+
Sbjct: 495 TYEITLRDVKELGEIKWQMLMVDEAHRLKNSESQLYEALR-GFSAASKVLITGTPLQNNV 553
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F N+F DA H KIKE L L + MLRR K
Sbjct: 554 KELLSLMHFLMPEKFLLTNEF--DLTDADHEV------KIKE----LHKQLESLMLRRLK 601
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ ++ LP +E ++ +Q Y +IL K L+ ++
Sbjct: 602 RDVLTS----LPTKSERILRVEMSAMQTHFYKNILTKNFQALVKSANGNNNISLLNIAME 657
Query: 316 --RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L A SGK+V+LD LL +L HRVL+F+QM +
Sbjct: 658 LKKAANHPFLFEGAETRSNNDEEVLKGLVMSSGKMVLLDKLLHRLRADNHRVLIFSQMVR 717
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDI+ D++ LR Y ++RLDG++ +E+R +I+HF+ A G+ F F++ST
Sbjct: 718 MLDIMSDYMTLRGYQHQRLDGTVASEQRKKSIQHFN-----------APGSPDFAFLLST 766
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE I+
Sbjct: 767 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDILE 826
Query: 477 RAERKLRLSHNVV 489
RA++K+ L + ++
Sbjct: 827 RAKKKMVLEYAII 839
>gi|427782997|gb|JAA56950.1| Putative chromatin remodeling complex swi/snf component swi2
[Rhipicephalus pulchellus]
Length = 1022
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/490 (38%), Positives = 271/490 (55%), Gaps = 70/490 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + GP +V+ P
Sbjct: 145 GELRDYQIRGLNWMISLYEHGINGILADEMGLGKTLQTISLLGYMKHYRNINGPHMVIVP 204
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W+SE ++ P L + +G++ R + R + P +DV +T
Sbjct: 205 KSTLANWMSEFERWCPSLRTVCLIGDQNARAALIR------------DTLMPGEWDVCVT 252
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++V+ ++ L + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL
Sbjct: 253 SYEMVIREKAVLKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNNL 311
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + F + F ++++ + E+ L +L F+LRR K
Sbjct: 312 HELWALLNFLLPDVFNSSEDFDAWF----NTNNCLGDNHLVER---LHAVLRPFLLRRLK 364
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + LPP E+ + +Q++ Y L K+ L +L
Sbjct: 365 SEVEK----KLPPKKEVKIYVGLSKMQREWYTKCLLKDIDVVNGAGKVDKMRLLNILMQL 420
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A GK+V+LD LL KL G RVL+F+QMT+ LD
Sbjct: 421 RKCCNHPYLFDGAEPGPPYTTDEHIVYNCGKMVILDKLLPKLKAQGSRVLIFSQMTRMLD 480
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R+Y Y RLDG EER +I F+ ++ D F+FM+STRAG
Sbjct: 481 ILEDYCLWRRYGYCRLDGQTPHEERTLSINEFNKPNS-----------DKFLFMLSTRAG 529
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI ++ DWNPQVD QA+ RAHRIGQ V ++TE+TVEE I+ RAE
Sbjct: 530 GLGINLATADVVILFDSDWNPQVDLQAMDRAHRIGQTKAVRVFRMITENTVEERIVERAE 589
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 590 VKLRLDTVVI 599
>gi|148228303|ref|NP_001083868.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a, member 5 [Xenopus laevis]
gi|49899007|gb|AAH76715.1| ISWI protein [Xenopus laevis]
Length = 1046
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 192/499 (38%), Positives = 275/499 (55%), Gaps = 72/499 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 163 DSPAYVKSGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIP 222
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W++E ++ P L + +G+++ R R + + P
Sbjct: 223 GPHMVLVPKSTLHNWMAEFKRWVPSLCAVCLIGDKDHRAAFVRDV------------LLP 270
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 271 GEWDVCVTSYEMLIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 329
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P VF + F S F +++ K+ E+ L +L
Sbjct: 330 GTPLQNNLHELWALLNFLLPDVFNSSEDFDSWF----DTNNCLGDQKLVER---LHMVLK 382
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT--- 317
F+LRR K + + L P EI + +Q++ Y IL K++ +L S +T
Sbjct: 383 PFLLRRIKADVEKS----LKPKKEIKIYVGLSKMQREWYTKILMKDI-DILNSSGKTDKM 437
Query: 318 ------------ANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLL 350
NH L + T SGK++VLD LL KL RVL+
Sbjct: 438 RLLNILMQLRKCCNHPYLFDGAEPGPPYTTDLHLATNSGKMMVLDKLLPKLKEQDSRVLI 497
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LDIL+D+ R Y Y RLDG EER +I ++ A G+ F
Sbjct: 498 FSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQESIIAYN-----------APGSTKF 546
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TV
Sbjct: 547 IFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV 606
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE I+ RAE KLRL V+
Sbjct: 607 EERIVERAEMKLRLDSIVI 625
>gi|367040973|ref|XP_003650867.1| chromatin-remodeling complex ATPase-like protein [Thielavia
terrestris NRRL 8126]
gi|346998128|gb|AEO64531.1| chromatin-remodeling complex ATPase-like protein [Thielavia
terrestris NRRL 8126]
Length = 1125
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 289/540 (53%), Gaps = 84/540 (15%)
Query: 17 NDERDG---QTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAI 73
NDE+ G +T + + ++ +Q+ GL+WLI + G++ +L DEMGLGKTLQ I
Sbjct: 163 NDEKHGGSAETVFRESPAFIHGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTI 222
Query: 74 SFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE 133
+FL YL+ GP L+ P S D W E AK+TP++ VL G +E+R + + E
Sbjct: 223 AFLGYLRHIMGITGPHLITVPKSTLDNWNREFAKWTPEVNVLVLQGAKEERHQL---INE 279
Query: 134 HVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
+ ++S FDV +T+Y+++L ++ L + W Y IIDEA R+KN S L V+
Sbjct: 280 RLVDES---------FDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQVI 330
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGK 253
R F RLL+TGTP+QNNL ELWAL++F +P VFG F F G+
Sbjct: 331 R-MFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFS-----------GQ 378
Query: 254 IKEQFT---SLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILR 304
++Q T L +L F+LRR K + + L P E+ V +Q K Y IL
Sbjct: 379 DRDQDTVVQQLHRVLRPFLLRRVKSDVEKS----LLPKKEVNVYVGMSEMQVKWYQKILE 434
Query: 305 KEL-------------PKLLALS---SRTANHQSLQNTA---------------SGKLVV 333
K++ +LL + + NH L A SGK++V
Sbjct: 435 KDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNSGKMLV 494
Query: 334 LDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSV 393
LD LLK+L G RVL+F+QM++ LDIL+D+ R Y Y R+DGS +R AAI ++
Sbjct: 495 LDKLLKRLQKQGSRVLIFSQMSRLLDILEDYCVFRGYKYCRIDGSTAHADRIAAIDEYNK 554
Query: 394 QSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRI 453
+ D F+F+++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRI
Sbjct: 555 PDS-----------DKFIFLLTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRI 603
Query: 454 GQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
GQ V+ VT++ +EE ++ RA +KLRL V+ +V + A D+L S+I
Sbjct: 604 GQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQQGRA--QVATKAAANKDELLSMI 661
>gi|312374256|gb|EFR21846.1| hypothetical protein AND_16272 [Anopheles darlingi]
Length = 1024
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 201/543 (37%), Positives = 290/543 (53%), Gaps = 80/543 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + + GP +V+ P
Sbjct: 129 GEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKNVRNNHGPHIVIVP 188
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S WV+E ++ P L + +G++E R R + + P +DV +T
Sbjct: 189 KSTLQNWVNEFGRWCPSLRPVCLIGDQETRNAFIRDV------------LMPGEWDVCIT 236
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNNL
Sbjct: 237 SYEMCIREKAVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTANRLLLTGTPLQNNL 295
Query: 215 SELWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
ELWAL++F +P +F + F S F + +S +R L +L F+LRR
Sbjct: 296 HELWALLNFLLPDIFNSAEDFDSWFDANQCMGDNSLIER---------LHAVLKPFLLRR 346
Query: 273 TKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKE--------------LPKLLAL 313
K E +LP ++ +Q++ Y IL K+ L +L
Sbjct: 347 LKS---EVEKRLLPKKEVKIFVGLSKMQREWYTKILMKDIDVVNGAGKVEKMRLQNILMQ 403
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+VVLD LL+KL RVL+F+QMT+ L
Sbjct: 404 LRKCTNHPYLFDGAEPGPPYTTDYHLLENSGKMVVLDKLLRKLQEQESRVLIFSQMTRML 463
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+DF R Y Y RLDG E+R I ++ A + F+FM+STRA
Sbjct: 464 DILEDFCHWRGYHYCRLDGQTPHEDRSNMIADYN-----------APDSKKFIFMLSTRA 512
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE+TVEE I+ RA
Sbjct: 513 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERA 572
Query: 479 ERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII-FGL-HLFDPK--AINNEESDDLR 533
E KL+L V+ +VD + + + D++ +II FG H+F + I +E+ D +
Sbjct: 573 EVKLKLDKLVIQQGRLVDNKTNQ---LNKDEMLNIIRFGANHVFQSRDSEITDEDIDAIL 629
Query: 534 LSG 536
G
Sbjct: 630 QKG 632
>gi|302681469|ref|XP_003030416.1| hypothetical protein SCHCODRAFT_58011 [Schizophyllum commune H4-8]
gi|300104107|gb|EFI95513.1| hypothetical protein SCHCODRAFT_58011 [Schizophyllum commune H4-8]
Length = 1312
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/494 (38%), Positives = 274/494 (55%), Gaps = 68/494 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + G+N +L DEMGLGKT+Q++S++S+L S GPFLV+ P
Sbjct: 239 GELKDFQLTGLNWLAFTWSHGLNGILADEMGLGKTVQSVSYISWLFHSMQVYGPFLVVVP 298
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W ++ A + P + V+ Y+G R+ IR YE + L +V+LT
Sbjct: 299 LSTITAWQAQFASWAPDISVIPYIGHATSRQIIRN--YEFSGPPVITFDPRRLKVNVILT 356
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++VL D +L QI W ++DEA RLKN S LY L F +LL+TGTP+QNN+
Sbjct: 357 TYEMVLKDANYLGQIKWQSLLVDEAHRLKNSESELYKTLMS-FNCANKLLITGTPLQNNV 415
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL ALMHF P F ++F DA H +E+ +L LS F+LRR K
Sbjct: 416 KELLALMHFLHPERFSLDSEF--DLNDADH----------EEKIQNLHKELSNFLLRRVK 463
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ ++ LP +E ++ LQ Y +IL + L+ ++
Sbjct: 464 KDVLAS----LPTKSERILRVEMSTLQTTFYKNILTRNFQGLVRSANGNSNISLLNIVME 519
Query: 316 --RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L + A SGK+V+LD LL +L GHRVL+F+QM +
Sbjct: 520 LKKAANHPFLFDGAELRSDDNEATLKGLVMNSGKMVLLDKLLARLRQDGHRVLIFSQMVR 579
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++ LR Y ++RLDG+I ++ R A+ HF++ G+ F F++ST
Sbjct: 580 MLDILSDYMSLRGYIHQRLDGTIASDARKKAMAHFNMP-----------GSPDFAFLLST 628
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ TVEE I+
Sbjct: 629 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTVEEEILE 688
Query: 477 RAERKLRLSHNVVG 490
+A+ K+ L + ++
Sbjct: 689 KAKAKMVLEYAIIN 702
>gi|410920960|ref|XP_003973951.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Takifugu rubripes]
Length = 632
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 201/500 (40%), Positives = 283/500 (56%), Gaps = 69/500 (13%)
Query: 24 TPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFS 82
T D ++G+ +LK +Q+ G+ WL + + +LGDEMGLGKT QAIS L Y+ +
Sbjct: 7 THRDIEKWGLRGIQLKSYQLNGVHWLSKCFNKQQGCILGDEMGLGKTCQAISLLLYVSGA 66
Query: 83 QMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMS 142
+ GPFLVL PLSV + W E KF P L+VL Y G++ +R + Q++M
Sbjct: 67 LRNKGPFLVLSPLSVLENWRKEF-KFAPSLKVLCYKGDKARRAEL----------QTEMD 115
Query: 143 NVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRR 202
+ FDVLLTTY++ L D FL + W ++DEA RLKN S L+ L+ F + R
Sbjct: 116 SQG---FDVLLTTYELCLKDASFLRRFTWAVLVVDEAHRLKNQFSKLHQSLKA-FSVKFR 171
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLN--QFLSTFKDAVHSSSAPKRGKIKEQFTS 260
LL+TGTPIQNNL EL++L++F P+ F N F++++ + H +
Sbjct: 172 LLLTGTPIQNNLQELYSLLNFIQPTTFKADNTDNFITSYCNLQHQPALA---------AE 222
Query: 261 LKGILSAFMLRRTKQKL-VECGHLM-LPPLTEITVLQKKVYASILRKELP---------- 308
L+ L F+LRR K ++ +E + M L +T LQKK Y ++L K+L
Sbjct: 223 LQERLEPFLLRRVKGEVDIEVPNKMELVIYHGMTALQKKYYKAVLMKDLEAFQNDHGHKN 282
Query: 309 ---KLLALSSRTANHQSLQN--------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
+L + NH L + ASGKL +L+ +L L+ +GHRVLL+
Sbjct: 283 RLLNILINLRKCVNHPYLFDGVEPEPFKTGKQFIEASGKLSLLNNILSVLHKNGHRVLLY 342
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDI+QD+++ YSYERLDGSIR E+R A+++FS ND F+
Sbjct: 343 SQMTRMLDIVQDYMDYMDYSYERLDGSIRGEDRDQAVKNFS-------------SNDIFI 389
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++ST+AGGVGLNL AADTVIF + D+NP D QA R HRIGQ V I L+ TVE
Sbjct: 390 FLLSTKAGGVGLNLTAADTVIFIDSDFNPHNDLQAAARCHRIGQNRPVKIIRLIGRDTVE 449
Query: 472 EVIMRRAERKLRLSHNVVGD 491
E++ RA KL L+ V+ D
Sbjct: 450 EIMYCRAVSKLNLTKTVIED 469
>gi|294659312|ref|XP_461680.2| DEHA2G03102p [Debaryomyces hansenii CBS767]
gi|199433866|emb|CAG90128.2| DEHA2G03102p [Debaryomyces hansenii CBS767]
Length = 1590
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 187/508 (36%), Positives = 277/508 (54%), Gaps = 84/508 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W++ + +N +L DEMGLGKT+Q IS L+YL + GPFLV+
Sbjct: 692 VGGTLKEYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLIEIKKISGPFLVI 751
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P ++ + Y G QR+ + +H +V F +L
Sbjct: 752 VPLSTLTNWNIEFEKWAPGVKKITYKGTPTQRK-----VLQH--------DVKSGNFQIL 798
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTT++ ++ D+ LS++ W + IIDE R+KN +S L L H+ RL++TGTP+QN
Sbjct: 799 LTTFEYIIKDRNLLSKVKWVHMIIDEGHRMKNANSKLSETLTHHYHSDYRLILTGTPLQN 858
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT-----SLKGILSA 267
NL ELWAL++F +P +F ++ F F ++ + ++ E+ T L +L
Sbjct: 859 NLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRP 918
Query: 268 FMLRRTK-----------QKLVECGHLMLPPLTEITVLQKKVYASILRKEL--------- 307
F+LRR K +K+V+C +++ LQ K+Y +L+ +
Sbjct: 919 FLLRRLKKDVEKDLPNKVEKVVKC---------KMSSLQSKLYQQMLKYNILYASKPGEG 969
Query: 308 --PKLLALSS-------RTANH-------QSLQNTAS----------GKLVVLDLLLKKL 341
P L+ ++ + NH ++L N AS GK +LD +L K
Sbjct: 970 DKPVLIKNANNQIMQLRKICNHPFVYEEVENLINPASETNDQIWRVAGKFELLDKVLPKF 1029
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
NSGHRVL+F QMTQ +DI++DFL LR Y RLDGS +A++R ++ F+
Sbjct: 1030 KNSGHRVLIFFQMTQIMDIMEDFLRLRGMKYMRLDGSTKADDRTGLLKLFN--------- 1080
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
A +D F F++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ N V
Sbjct: 1081 --APNSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRI 1138
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV 489
+ L+TE +VEE+I+ RA KL + V+
Sbjct: 1139 LRLITEDSVEEMILERAHAKLEIDGKVI 1166
>gi|453089622|gb|EMF17662.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 1534
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 274/507 (54%), Gaps = 75/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ GL++L + G NV+L DEMGLGKT+Q +SF+++L+ + GPF+V+ P
Sbjct: 387 GELREFQIHGLNFLAHHWCRGNNVILADEMGLGKTVQTVSFMNWLRHDRRQQGPFVVVVP 446
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +TP L + Y G R+ IR YE + + N + F+VLLT
Sbjct: 447 LSTMPAWADTFNNWTPDLNYVVYNGNEASRKIIRE--YELLVD----GNPKKVKFNVLLT 500
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D FLSQ+ W + +DEA RLKN S LY L + F RLL+TGTP+QN L
Sbjct: 501 TYEYILADAPFLSQLKWQFMAVDEAHRLKNRESQLYAKLMD-FGAASRLLITGTPMQNTL 559
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL ALM F MP +DA ++ + L +S +M+RRTK
Sbjct: 560 GELSALMDFLMPGKIHVDEHIDLMSEDA------------SKKLSELTEAISPYMIRRTK 607
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
QK+ LPP T E++ +Q + Y +IL + L A S
Sbjct: 608 QKVEND----LPPKTEKIIRVELSDVQLEYYKNILTRNYAALNAGSKGAKTSLLNIMMEL 663
Query: 315 SRTANH-------------------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ +NH + L+ T+SGK+++LD LL K+ GHRVL+F+Q
Sbjct: 664 KKASNHPFLFPAAEDRILAGSDSRDEQLKALITSSGKMMLLDQLLTKMKKDGHRVLIFSQ 723
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M + LD+L D+L+LR Y ++RLDG+I A R AI HF+ + G+ F F+
Sbjct: 724 MVKMLDLLGDYLQLRGYQFQRLDGTIAAGPRRMAIDHFNAE-----------GSQDFCFL 772
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V V++ TVEE
Sbjct: 773 LSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQKKPVTIYRFVSKDTVEEE 832
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKE 500
++ RA KL L + V D++ ++
Sbjct: 833 VLERARNKLMLEFITIQRGVTDKDARD 859
>gi|443894508|dbj|GAC71856.1| chromatin remodeling complex WSTF-ISWI, small subunit [Pseudozyma
antarctica T-34]
Length = 1106
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/490 (38%), Positives = 274/490 (55%), Gaps = 72/490 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +QV+GL+W+I Y G+N +L DEMGLGKTLQ ISFL YL+ + +PG LV+ P S
Sbjct: 229 MRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQTISFLGYLRDFRNTPGFHLVVVPKS 288
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
D W E ++ P V+ G +E+R + +++H+ P FDVL+TTY
Sbjct: 289 TLDNWYREFQRWVPGFNVVTLKGSKEERDEV---IHKHL---------LPQDFDVLITTY 336
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L ++ L ++ W Y IIDEA R+KN S+L ++R F RLL+TGTP+QNNL E
Sbjct: 337 EMCLREKSALKKLSWEYIIIDEAHRIKNVDSMLSQIVRA-FNSRSRLLITGTPLQNNLME 395
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LW+L++F +P VF F S FK + ++ +Q L +L F+LRR K
Sbjct: 396 LWSLLNFLLPDVFSNSEDFESWFK----GKGDENQDQVVQQ---LHKVLRPFLLRRVKAD 448
Query: 277 LVECGHLMLPPLTEI------TVLQKKVYASILRKEL-------------PKLLALS--- 314
+ + L P EI T +Q+K Y SIL K++ +LL +
Sbjct: 449 VEKS----LLPKKEINLFVGLTEMQRKWYKSILEKDIDAVNGGVGKKEGKTRLLNIVMQL 504
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A S K+ LD LL+K+ +G RVL+F+QM++ LD
Sbjct: 505 RKCCNHPYLFDGAEPGPPFTTDEHLVFNSDKMKKLDKLLRKMKANGSRVLIFSQMSRMLD 564
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y+Y R+DG E+R AAI ++ G++ FVF+++TRAG
Sbjct: 565 ILEDYCLFRDYAYCRIDGGTAHEDRIAAIDEYN-----------KPGSEKFVFLLTTRAG 613
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD V+ ++ DWNPQ D QA+ RAHRIGQ V VTE+ +EE I+ RA
Sbjct: 614 GLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTENAIEERILERAA 673
Query: 480 RKLRLSHNVV 489
+KLRL V+
Sbjct: 674 QKLRLDQLVI 683
>gi|410078704|ref|XP_003956933.1| hypothetical protein KAFR_0D01520 [Kazachstania africana CBS 2517]
gi|372463518|emb|CCF57798.1| hypothetical protein KAFR_0D01520 [Kazachstania africana CBS 2517]
Length = 1028
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 190/501 (37%), Positives = 282/501 (56%), Gaps = 71/501 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
++ F + +L+ +Q++GL+WLI + ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 121 TESPSFVKSGKLRDYQIQGLNWLISLHEHKLSGILADEMGLGKTLQTISFLGYLRYVKKI 180
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFLV+ P S W E K+TP++ V G++E RR I +++ + E
Sbjct: 181 DGPFLVIVPKSTLHNWKREFNKWTPEVNVCVLHGDKEARREI---VHDTILEAK------ 231
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR-RLL 204
FD L+T+Y++V+ ++ L +I W Y IIDEA R+KN S L ++R L R RLL
Sbjct: 232 ---FDALVTSYEMVIREKSDLRKIAWQYLIIDEAHRIKNEQSALSQIIR--LLYSRNRLL 286
Query: 205 MTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGI 264
+TGTP+QNNL ELWAL++F +P VFG F F+ ++S + + +Q L +
Sbjct: 287 ITGTPLQNNLHELWALLNFLLPDVFGDSEIFEEWFE---QNNSEEDQEVLVQQ---LHTV 340
Query: 265 LSAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL------------ 307
L+ F+LRR K + +LP + +T +Q + Y S+L K++
Sbjct: 341 LNPFLLRRIK---ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREG 397
Query: 308 -PKLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRV 348
+LL + + NH L A SGK+++LD LLK+L G R+
Sbjct: 398 KTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKAKGSRL 457
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM++ LDIL+D+ R Y Y R+DGS EER AI ++ +
Sbjct: 458 LIFSQMSRLLDILEDYCYFRDYEYCRIDGSTSHEERIEAIDEYNKPDS-----------S 506
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
FVF+++TRAGG+G+NLV ADTV+ Y+ DWNPQ D QA+ RAHRIGQ V VTE+
Sbjct: 507 KFVFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVYVYRFVTEN 566
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
+EE ++ RA +KLRL V+
Sbjct: 567 AIEEKVIERAAQKLRLDQLVI 587
>gi|11035016|gb|AAG01537.2|AF292095_1 imitation switch ISWI [Xenopus laevis]
Length = 1046
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 191/499 (38%), Positives = 275/499 (55%), Gaps = 72/499 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 163 DSPAYVKSGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRSIP 222
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W++E ++ P L + +G+++ R R + + P
Sbjct: 223 GPHMVLVPKSTLHNWMAEFKRWVPSLCAVCLIGDKDHRAAFVRDV------------LLP 270
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 271 GEWDVCVTSYEMLIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 329
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P VF + F S F +++ K+ E+ L +L
Sbjct: 330 GTPLQNNLHELWALLNFLLPDVFNSSEDFDSWF----DTNNCLGDQKLVER---LHMVLK 382
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT--- 317
F+LRR K + + L P EI + +Q++ Y IL K++ +L S +T
Sbjct: 383 PFLLRRIKADVEKS----LKPKKEIKIYVGLSKMQREWYTKILMKDI-DILNSSGKTDKM 437
Query: 318 ------------ANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLL 350
NH L + T SGK++VLD LL KL R+L+
Sbjct: 438 RLLNILMQLRKCCNHPYLFDGAEPGPPYTTDLHLATNSGKMMVLDKLLPKLKEQDSRILI 497
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LDIL+D+ R Y Y RLDG EER +I ++ A G+ F
Sbjct: 498 FSQMTRVLDILEDYCMWRNYEYCRLDGQTPHEERQESIIAYN-----------APGSTKF 546
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TV
Sbjct: 547 IFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTV 606
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE I+ RAE KLRL V+
Sbjct: 607 EERIVERAEMKLRLDSIVI 625
>gi|378729701|gb|EHY56160.1| chromodomain-helicase-DNA-binding protein 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 1563
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 199/508 (39%), Positives = 271/508 (53%), Gaps = 79/508 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ Q+ G+++L ++ G NV+L DEMGLGKT+Q ++FLS+L+ ++ GPFLV+ PLS
Sbjct: 460 LRDFQMTGVNFLAYNWVKGKNVVLADEMGLGKTVQTVAFLSWLRHNRGQQGPFLVVVPLS 519
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W + P + + Y G + R IR YE + + NV F VLLTTY
Sbjct: 520 TMPAWADTFDMWAPDINYVIYNGNQNSRNIIRD--YELLPD----GNVRHPRFHVLLTTY 573
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ VL D FL+QI W + +DEA RLKN S LY+ LRE F P RLL+TGTP+QNNL E
Sbjct: 574 EYVLHDASFLNQIKWQFMAVDEAHRLKNRDSQLYDRLRE-FKAPARLLITGTPVQNNLGE 632
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
L AL F P V T ++A + L + +MLRRTKQK
Sbjct: 633 LSALFDFLNPGVVNIDENMDLTTEEA------------SAKIAQLTEDIKPYMLRRTKQK 680
Query: 277 LVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRTANHQSLQN----- 325
+ + LPP T E++ +Q + Y +IL K L + QSL N
Sbjct: 681 VEKD----LPPKTEKIIRVELSDIQLEYYKNILTKNYAALNQGAK--GQKQSLLNIMMEL 734
Query: 326 --------------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
T+SGK+++LD LL KL GHRVL+F+Q
Sbjct: 735 KKASNHPFMFPSAEERLVPEGARRDEVLRALVTSSGKMMLLDQLLTKLKRDGHRVLIFSQ 794
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M + LDIL D++E R ++Y+RLDG+I A R AI HF+ A ++ F F+
Sbjct: 795 MVKMLDILGDYMEYRGHAYQRLDGTIAAAPRRIAIDHFN-----------APDSNDFCFL 843
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ TVEE
Sbjct: 844 LSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQQKPVSVYRLVSKETVEEE 903
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKER 501
I+ RA KL L + V D + + R
Sbjct: 904 ILERARNKLMLEFLTIQRGVTDEKAQAR 931
>gi|367030403|ref|XP_003664485.1| chromatin-remodeling complex ATPase-like protein [Myceliophthora
thermophila ATCC 42464]
gi|347011755|gb|AEO59240.1| chromatin-remodeling complex ATPase-like protein [Myceliophthora
thermophila ATCC 42464]
Length = 1125
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 194/515 (37%), Positives = 280/515 (54%), Gaps = 82/515 (15%)
Query: 18 DERDG---QTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAIS 74
DE+DG +T + + ++ +Q+ GL+WLI + G++ +L DEMGLGKTLQ I+
Sbjct: 164 DEKDGGSAETVFRESPPFIQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTIA 223
Query: 75 FLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEH 134
FL YL+ GP LV P S D W E K+TP++ VL G +E+R + + +
Sbjct: 224 FLGYLRHIMGITGPHLVTVPKSTLDNWKREFEKWTPEVNVLVLQGAKEERHQL---INDR 280
Query: 135 VKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR 194
+ +++ FDV +T+Y+++L ++ L + W Y IIDEA R+KN S L V+R
Sbjct: 281 LVDEN---------FDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQVIR 331
Query: 195 EHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKI 254
F RLL+TGTP+QNNL ELWAL++F +P VFG F F G+
Sbjct: 332 -MFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFS-----------GQD 379
Query: 255 KEQFT---SLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRK 305
++Q T L +L F+LRR K + + L P EI V +Q K Y IL K
Sbjct: 380 RDQDTVVQQLHRVLRPFLLRRVKSDVEKS----LLPKKEINVYIGMSEMQVKWYQKILEK 435
Query: 306 EL-------------PKLLALS---SRTANHQSLQNTA---------------SGKLVVL 334
++ +LL + + NH L A +GK+VVL
Sbjct: 436 DIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIYNAGKMVVL 495
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LLK++ G RVL+F+QM++ LDIL+D+ R Y Y R+DGS E+R AAI ++
Sbjct: 496 DKLLKRIQKQGSRVLIFSQMSRLLDILEDYCVFRGYKYCRIDGSTAHEDRIAAIDEYN-- 553
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
G+D F+F+++TRAGG+G+NL AD VI Y+ DWNPQ D QA+ RAHRIG
Sbjct: 554 ---------KPGSDKFIFLLTTRAGGLGINLTTADIVILYDSDWNPQADLQAMDRAHRIG 604
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
Q V+ VT++ +EE ++ RA +KLRL V+
Sbjct: 605 QTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVI 639
>gi|296417472|ref|XP_002838381.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634311|emb|CAZ82572.1| unnamed protein product [Tuber melanosporum]
Length = 1069
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 189/518 (36%), Positives = 283/518 (54%), Gaps = 63/518 (12%)
Query: 21 DGQTP---VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS 77
DG T ++ +F +++ +Q+ GL+WLI + G++ +L DEMGLGKTLQ ISFL
Sbjct: 116 DGGTAAIFTESPKFIKGGQMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLG 175
Query: 78 YLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKE 137
YL++ GP L+ P S D W E K+TP ++VL G +E+R+ + + +
Sbjct: 176 YLRYVAGIKGPHLITVPKSTLDNWKREFEKWTPDVKVLVLQGTKEERQKLIQEL------ 229
Query: 138 QSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHF 197
V FD L+T+Y+++L ++ L + W Y I+DEA R+KN S L ++R F
Sbjct: 230 ------VLTDGFDCLVTSYEMILREKTHLKKFAWEYIIVDEAHRIKNEESALAQIIR-LF 282
Query: 198 LMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ 257
RLL+TGTP+QNNL ELWAL++F +P VFG F F++ + G
Sbjct: 283 NSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSAAFDEWFEN--------QGGDQDVV 334
Query: 258 FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITVLQKKV----YASILRKELPKLLAL 313
L +L F+LRR K + + L P E+ +L+K + A R+ +LL +
Sbjct: 335 VQQLHKVLRPFLLRRVKSDVEKS----LLPKKEVNILEKDIDAVNGAGGKRESKTRLLNI 390
Query: 314 S---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NH L A SGK+V+LD LLK++ RVL+F+QM+
Sbjct: 391 VMQLRKCCNHPYLFEGAEPGPPYTTDEHIIDNSGKMVMLDKLLKRMKAQKSRVLIFSQMS 450
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ R+Y Y R+DGS E+R AI ++ G++ F+F+++
Sbjct: 451 RQLDILEDYCVFREYPYCRIDGSTAHEDRITAIDEYN-----------KPGSEKFIFLLT 499
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VTE+ +EE ++
Sbjct: 500 TRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVMVFRFVTENAIEEKVL 559
Query: 476 RRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ ++ K A D+L S+I
Sbjct: 560 ERAAQKLRLDQLVIQQGRSQQQAK--AAANKDELLSMI 595
>gi|391347377|ref|XP_003747940.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5-like
[Metaseiulus occidentalis]
Length = 1049
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 272/499 (54%), Gaps = 72/499 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ ++ EL+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K +
Sbjct: 160 ESPKYITGGELRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFRNIN 219
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W +E ++ P L + +G++E R + R + K
Sbjct: 220 GPHMVLVPKSTLANWEAEFERWCPSLRTVILIGDQEARNTLIRDVVMQEK---------- 269
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DVL+T+Y++V+ ++G L + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 270 --WDVLITSYEMVIREKGVLKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 326
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFK-DAVHSSSAPKRGKIKEQFTSLKGIL 265
GTP+QNNL ELWAL++F +P VF + F S F ++V ++ L +L
Sbjct: 327 GTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFSTNSVFGD--------QDLVERLHAVL 378
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELP----------- 308
F+LRR K ++ LPP E+ + +Q++ Y L K++
Sbjct: 379 RPFLLRRLKSEV----EKKLPPKKEVKIYVGLSKMQREWYTKCLMKDIDVVNGAGKVDKM 434
Query: 309 ---KLLALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+L + NH L + A GK+VVLD LL +L G RVL+
Sbjct: 435 RLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNCGKMVVLDKLLPRLKEQGSRVLI 494
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LDIL+D+ R + Y RLDG E+R +I ++ G++ F
Sbjct: 495 FSQMTRMLDILEDYCYWRNWQYCRLDGQTPHEDRTKSIIEYN-----------RPGSEKF 543
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VFM+STRAGG+G+NL AD VI ++ DWNPQ D QA+ RAHRIGQ+ V VTE+T+
Sbjct: 544 VFMLSTRAGGLGINLYTADIVILFDSDWNPQADLQAMDRAHRIGQLKPVKVFRFVTENTI 603
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE I+ +AE KLRL V+
Sbjct: 604 EERIVEKAEVKLRLDKMVI 622
>gi|70995269|ref|XP_752395.1| chromodomain helicase (Chd1) [Aspergillus fumigatus Af293]
gi|66850030|gb|EAL90357.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus
Af293]
Length = 1523
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 202/513 (39%), Positives = 278/513 (54%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 443 FLQNGELKDFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFIAWLRHVRRQQGPFI 502
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP--LP 148
V+ PLS W +TP L + Y G RTM +K+ M + +P
Sbjct: 503 VVVPLSTMPSWAETFDNWTPDLNYVVYNGNEAA-----RTM---LKDYELMIDGNPRRAK 554
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL D FLSQ W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 555 FNVLLTTYEYVLQDSTFLSQFKWQFMAVDEAHRLKNRDSQLYQKLLE-FKSPARLLITGT 613
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL ALM F P G ++ + +A +S ++ +L + +
Sbjct: 614 PIQNNLAELSALMDFLNP---GVIDVDVDMDLNAEAAS---------QKLAALTNAIQPY 661
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKEL--------------- 307
MLRRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 662 MLRRTKSK-VESD---LPPKTEKIIRVELSDVQLEYYKNILTKNYAALNDGAQGQKQSLL 717
Query: 308 --------------------PKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
K+L S+R + T+SGK+++LD LL KL GHR
Sbjct: 718 NIMMELKKASNHPFMFPNAEAKILEGSTRREDVLRALITSSGKMMLLDQLLAKLKRDGHR 777
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LD+L D++E R YSY+RLDG+I A R AI HF+ A G+
Sbjct: 778 VLIFSQMVKMLDLLGDYMESRGYSYQRLDGTIPAASRRLAIEHFN-----------APGS 826
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 827 SDFCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 886
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 887 DTVEEEVIERARNKLLLEFITIQRGVTDKEASE 919
>gi|115491355|ref|XP_001210305.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624]
gi|114197165|gb|EAU38865.1| hypothetical protein ATEG_00219 [Aspergillus terreus NIH2624]
Length = 1459
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 202/513 (39%), Positives = 280/513 (54%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ NV+L DEMGLGKT+Q ++F+S+L+ + GPF+
Sbjct: 432 FVQNGELKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFISWLRHVRRQQGPFV 491
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL--P 148
V+ PLS W +TP L + Y G E RN+ ++E M + +P
Sbjct: 492 VVVPLSTMPSWADTFDNWTPDLNYIVYNGN-EAARNV-------LREHELMIDGNPKRPK 543
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL+D FLSQ W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 544 FNVLLTTYEYVLLDSSFLSQFKWQFMAVDEAHRLKNRESQLYQKLLE-FRSPARLLITGT 602
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL AL+ F P G ++ + +A +S ++ L + F
Sbjct: 603 PIQNNLAELSALLDFLNP---GLVDIDVDMDLNAEAAS---------QKLAELTKAIQPF 650
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRK----------------- 305
MLRRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 651 MLRRTKSK-VESD---LPPKTEKIIRVELSDIQLEYYKNILTKNYAALNEGTKGQKQSLL 706
Query: 306 ----ELPK--------------LLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
EL K +L S+R + T+SGK+++LD LL KL GHR
Sbjct: 707 NIMMELKKASNHPFMFPNAEARILEGSTRREDILRAMITSSGKMMLLDQLLAKLKRDGHR 766
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LD+L +++E R Y Y+RLDG+I A R AI HF+ A G+
Sbjct: 767 VLIFSQMVKMLDLLGEYMEFRGYQYQRLDGTIAAASRRLAIEHFN-----------APGS 815
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 816 SDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSK 875
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 876 DTVEEEVIERARNKLLLEFITIQRGVTDKEASE 908
>gi|195430100|ref|XP_002063095.1| GK21565 [Drosophila willistoni]
gi|194159180|gb|EDW74081.1| GK21565 [Drosophila willistoni]
Length = 1026
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 192/519 (36%), Positives = 282/519 (54%), Gaps = 75/519 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ E++ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+
Sbjct: 125 SGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E K+ P L + +G+++ R R + + P +DV +
Sbjct: 185 PKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDV------------LLPGEWDVCV 232
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNN 291
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F F ++++ + T L +L F+LRR
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRL 344
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K ++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 345 KAEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDIVNGAGKVEKMRLQNILMQ 400
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+ +LD LL KL RVL+F+QMT+ L
Sbjct: 401 LRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQESRVLIFSQMTRML 460
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y+Y RLDG E+R I+ ++++++ + F+FM+STRA
Sbjct: 461 DILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEYNMENSTK-----------FIFMLSTRA 509
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RA
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 479 ERKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FG 515
E KLRL V+ G +VD + + D++ +II FG
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQ---LNKDEMLNIIRFG 605
>gi|258570209|ref|XP_002543908.1| CHD1 protein [Uncinocarpus reesii 1704]
gi|237904178|gb|EEP78579.1| CHD1 protein [Uncinocarpus reesii 1704]
Length = 1358
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 202/519 (38%), Positives = 279/519 (53%), Gaps = 89/519 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F +LK QV+G++++ ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF
Sbjct: 453 DFICNGKLKDFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHMRNQQGPF 512
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM--SNVSPL 147
+V+ PLS W +TP L + Y G E RNI +KE + N+
Sbjct: 513 IVVVPLSTMPSWAETFDYWTPDLNYVVYSGN-EASRNI-------IKEYELLVDGNIKRP 564
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
F VLLTTY+ VL+D FLSQI W + +DEA RLKN S LY L E F P RLL+TG
Sbjct: 565 KFHVLLTTYEYVLVDASFLSQIRWQFLAVDEAHRLKNRDSQLYAKLLE-FKSPSRLLITG 623
Query: 208 TPIQNNLSELWALMHFCMPSVFG-----TLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
TP+QNNL EL ALM F P + L+ +++FK L
Sbjct: 624 TPVQNNLGELSALMDFLNPGLIEIDEDMDLSSEMASFK-----------------LAELT 666
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-- 314
+ FMLRRTK K VE LPP + E++ +Q + Y +IL K L S
Sbjct: 667 KAIQPFMLRRTKSK-VETD---LPPKSEKIIRVELSDVQLEYYKNILTKNYAALNQGSKG 722
Query: 315 ------------SRTANH---------QSLQN------------TASGKLVVLDLLLKKL 341
+ +NH + LQ T+SGK+++LD LL KL
Sbjct: 723 QKQSLLNIMMELKKASNHPFMFANAEERILQGSTRREDALRALITSSGKMMLLDQLLAKL 782
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
N GHRVL+F+QM + LDIL D++E R ++Y+RLDG+I A R +I HF+ + +
Sbjct: 783 KNDGHRVLIFSQMVRMLDILADYMEARNFAYQRLDGTIAAGPRRLSIEHFNSPDSTD--- 839
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V
Sbjct: 840 --------FAFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSV 891
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
LV++ TVEE ++ RA KL L + V D+E E
Sbjct: 892 YRLVSKDTVEEEVIERARNKLLLEFITIQRGVTDKEATE 930
>gi|153791718|ref|NP_001093467.1| probable global transcription activator SNF2L1 [Danio rerio]
Length = 1036
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 270/488 (55%), Gaps = 71/488 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 143 LRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 202
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L+ + +G +++R R + + P +DV +T+Y
Sbjct: 203 TLHNWMNEFKRWVPTLKAVCLIGNKDERAAFIRDV------------MMPGEWDVCVTSY 250
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L + RE F RLL+TGTP+QNNL E
Sbjct: 251 EMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIARE-FKTTNRLLLTGTPLQNNLHE 309
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LW+L++F +P VF + + F S F ++ K+ E+ L +L F+LRR K +
Sbjct: 310 LWSLLNFLLPDVFNSASDFDSWF-----DTNCLGDQKLVER---LHAVLRPFLLRRIKAE 361
Query: 277 LVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALSSR 316
+ + LPP E+ + +Q++ Y IL K+ L +L +
Sbjct: 362 VEKS----LPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRK 417
Query: 317 TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L + A SGK+V LD LL K+ G RVL+F+QMT+ LDIL
Sbjct: 418 CCNHPYLFDGAEPGPPYTTDTHLVINSGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDIL 477
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D+ R + Y RLDG+ E R AI F+ A + F+FM+STRAGG+
Sbjct: 478 EDYCMWRGFEYCRLDGNTPHEAREQAIDAFN-----------APNSSKFIFMLSTRAGGL 526
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE K
Sbjct: 527 GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFRLITDNTVEERIVERAEMK 586
Query: 482 LRLSHNVV 489
LRL V+
Sbjct: 587 LRLDSIVI 594
>gi|388853645|emb|CCF52817.1| probable ISW2-ATPase component of a two subunit chromatin
remodeling complex [Ustilago hordei]
Length = 1113
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 183/490 (37%), Positives = 272/490 (55%), Gaps = 72/490 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +Q++GL+W+I Y G+N +L DEMGLGKTLQ ISFL YL+ + +PG LV+ P S
Sbjct: 228 MRDYQIQGLNWMISLYHNGINGILADEMGLGKTLQTISFLGYLRDLRDTPGFHLVVVPKS 287
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
D W E ++ P V+ G +E+R + + H+ FDVL+TTY
Sbjct: 288 TLDNWYREFQRWVPGFNVVTLKGAKEERGQV---IQNHLLSGD---------FDVLITTY 335
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ L ++ L ++ W Y +IDEA R+KN S+L ++R F RLL+TGTP+QNNL E
Sbjct: 336 EMCLREKSALKKLSWEYIVIDEAHRIKNVDSILSQIVRA-FNSRSRLLITGTPLQNNLME 394
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LW+L++F +P VF F + FK + ++ +Q L +L F+LRR K
Sbjct: 395 LWSLLNFLLPDVFSNSEDFETWFK----GKGDENQDQVVQQ---LHKVLRPFLLRRVKAD 447
Query: 277 LVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLALS--- 314
+ + L P EI + +Q++ Y SIL K++ +LL +
Sbjct: 448 VEKS----LLPKKEINIFVGLTDMQRRWYKSILEKDIDAVNGGVGRKQGKTRLLNIVMQL 503
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V+LD LL+K+ G RVL+F+QM++ LD
Sbjct: 504 RKCCNHPYLFDGAEPGPPFTTDEHLVDNSGKMVILDRLLRKMKEKGSRVLIFSQMSRMLD 563
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R+Y Y R+DG E+R AAI ++ + + F+F+++TRAG
Sbjct: 564 ILEDYCLFREYQYCRIDGGTAHEDRIAAIDDYNQPDS-----------EKFIFLLTTRAG 612
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD V+ ++ DWNPQ D QA+ RAHRIGQ V VTEH +EE I+ RA
Sbjct: 613 GLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFVTEHAIEERILDRAA 672
Query: 480 RKLRLSHNVV 489
+KLRL V+
Sbjct: 673 QKLRLDQLVI 682
>gi|116201585|ref|XP_001226604.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88177195|gb|EAQ84663.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1125
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 187/497 (37%), Positives = 275/497 (55%), Gaps = 79/497 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ ++ +Q+ GL+WLI + G++ +L DEMGLGKTLQ ISFL YL+ + GP LV
Sbjct: 182 IQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHIMGTTGPHLVT 241
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E A++TP++ VL G +E+R+ + + E + +++ FDV
Sbjct: 242 VPKSTLDNWKREFARWTPEVNVLVLQGAKEERQQL---INERLVDEN---------FDVC 289
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+++L ++ L + W Y IIDEA R+KN S L V+R F RLL+TGTP+QN
Sbjct: 290 ITSYEMILREKAHLRKFAWEYIIIDEAHRIKNEESSLAQVIR-MFNSRNRLLITGTPLQN 348
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT---SLKGILSAFM 269
NL ELWAL++F +P VFG F F G+ ++Q T L +L F+
Sbjct: 349 NLHELWALLNFLLPDVFGDAEAFDQWFS-----------GQDRDQDTVVQQLHRVLRPFL 397
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKL 310
LRR K + + L P E+ V +Q K Y IL K++ +L
Sbjct: 398 LRRVKSDVEKS----LLPKKEVNVYIGMSEMQVKWYQKILEKDIDAVNGAGGKRESKTRL 453
Query: 311 LALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
L + + NH L A +GK++VLD LLK++ G RVL+F+
Sbjct: 454 LNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNAGKMIVLDKLLKRMQKQGSRVLIFS 513
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM++ LDIL+D+ R+Y Y R+DGS E+R AAI ++ + + FVF
Sbjct: 514 QMSRLLDILEDYCVFRQYKYCRIDGSTAHEDRIAAIDDYNKPDS-----------EKFVF 562
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
+++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VT++ +EE
Sbjct: 563 LLTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEE 622
Query: 473 VIMRRAERKLRLSHNVV 489
++ RA +KLRL V+
Sbjct: 623 KVLERAAQKLRLDQLVI 639
>gi|357616571|gb|EHJ70266.1| hypothetical protein KGM_18078 [Danaus plexippus]
Length = 988
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 198/539 (36%), Positives = 292/539 (54%), Gaps = 71/539 (13%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
E++ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 127 NGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKNFKNVPGPHIVIV 186
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRR-NIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E K+ P L + +G++E R IR T+ P +DV
Sbjct: 187 PKSTLTNWMNEFKKWCPSLRAVCLIGDQETRNIFIRETLM-------------PGNWDVC 233
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++++ ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QN
Sbjct: 234 ITSYEMIIREKSVFKKFNWRYMVIDEAHRIKNEKSKLSELLRE-FKSMNRLLLTGTPLQN 292
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF + + F + F ++++A ++ + L +L F+LRR
Sbjct: 293 NLHELWALLNFLLPDVFNSSDDFDAWF----NTNAALGDNQL---VSRLHAVLRPFLLRR 345
Query: 273 TKQKLVECGHLMLPPLTEITV--LQKKVYASILRKE--------------LPKLLALSSR 316
K ++ + I + +Q++ Y +L K+ L +L +
Sbjct: 346 LKAEVEKKLKPKKELKVYIGLSKMQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRK 405
Query: 317 TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L + A GKL +LD LL KL RVL+F+QMT+ LDIL
Sbjct: 406 CCNHPYLFDGAEPGPPYTTDEHLVYNCGKLAILDKLLPKLQEQESRVLIFSQMTRMLDIL 465
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D+ R+Y Y RLDG E+R I ++ A G++ F+FM+STRAGG+
Sbjct: 466 EDYCLWRQYKYCRLDGQTPHEDRNRQIEEYN-----------AEGSEKFIFMLSTRAGGL 514
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQM V L+TE+TVEE I+ RAE K
Sbjct: 515 GINLTTADVVIIYDSDWNPQMDLQAMDRAHRIGQMKQVRVFRLITENTVEEKIVERAEVK 574
Query: 482 LRLSHNVVGDDVVDREVKERTAVETDDLRSII--FGLHLFDPK--AINNEESDDLRLSG 536
LRL V+ R V + + D++ ++I H+F K I +E+ D + G
Sbjct: 575 LRLDKLVIQS---GRLVDIKNQLNKDEMLNMIRHGANHVFSSKDSEITDEDIDSILAKG 630
>gi|156848828|ref|XP_001647295.1| hypothetical protein Kpol_1002p85 [Vanderwaltozyma polyspora DSM
70294]
gi|156117980|gb|EDO19437.1| hypothetical protein Kpol_1002p85 [Vanderwaltozyma polyspora DSM
70294]
Length = 1070
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 191/517 (36%), Positives = 286/517 (55%), Gaps = 69/517 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ L+P+QV+G++W+I + G+ +L DEMGLGKTLQ I+FL Y+++ + PGPFLV+
Sbjct: 136 IDGTLRPYQVQGVNWMISLHKFGLAGILADEMGLGKTLQTITFLGYMRYIEKKPGPFLVI 195
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ K+TP + G++E+R NI Q+++ + + FD+
Sbjct: 196 APKSTLNNWLREINKWTPDVNAFILQGDKEERANII---------QNKLISCN---FDIA 243
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ +I W Y +IDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 244 IASYEIIIREKAAFRKIDWEYIVIDEAHRIKNEESLLSQVLRE-FTSRNRLLITGTPLQN 302
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + KI +Q L +L F+LRR
Sbjct: 303 NLHELWALLNFLLPDIFSDSQDFDDWFS---SQSTDDDQEKIVKQ---LHTVLQPFLLRR 356
Query: 273 TKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL-------------PKLLALS-- 314
K VE L L ++ +Q+K Y IL K+L +LL +
Sbjct: 357 IKND-VETSLLPKKELNLYVGMSSMQRKWYKQILEKDLDAVNGANGNKESKTRLLNIVMQ 415
Query: 315 -SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQMTQ 356
+ +NH L + A G D L +YNS G RVL+F+QM++
Sbjct: 416 LRKCSNHPYLFDGAEPGPPYTTDEHL--VYNSEKLLVLDKLLKKLKAEGSRVLIFSQMSR 473
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R Y Y R+DGS E+R AI ++ A ++ F+F+++T
Sbjct: 474 ILDILEDYCYFRGYEYCRIDGSTAHEDRIQAIDDYN-----------APDSNKFLFLLTT 522
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+
Sbjct: 523 RAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 582
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + KE + D L S+I
Sbjct: 583 RATQKLRLDQLVIQQNRTPVNKKENRNDQKDALLSMI 619
>gi|392570143|gb|EIW63316.1| transcription regulator [Trametes versicolor FP-101664 SS1]
Length = 1445
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 190/493 (38%), Positives = 270/493 (54%), Gaps = 74/493 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + G N +L DEMGLGKT+Q++SFLSYL + GPFLV+ P
Sbjct: 386 GELKDFQLTGLNWLAYLWSKGENGILADEMGLGKTVQSVSFLSYLFHERRQYGPFLVIVP 445
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W S+ A + P + V+ Y+G R R+ + + L +VLLT
Sbjct: 446 LSTITAWQSQFATWAPDMHVVAYIGGAAARSTARQYEF--------GPSAKKLKMNVLLT 497
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++ L D L +I W ++DEA RLKN S LY L F ++L+TGTP+QNN+
Sbjct: 498 TYEITLRDVKELGEIKWQVLMVDEAHRLKNSESQLYEAL-SGFSAASKVLITGTPLQNNV 556
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F N+F DA H KIKE L L + MLRR K
Sbjct: 557 KELLSLMHFLMPEKFQLTNEF--DLADADHEV------KIKE----LHKQLESLMLRRLK 604
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ ++ LP +E ++ LQ Y +IL K L+ ++
Sbjct: 605 RDVLTS----LPTKSERILRVEMSALQTHFYKNILTKNFQALVKSANGNNNISLLNIAME 660
Query: 316 --RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L + A SGKLV+LD LL +L GHRVL+F+QM +
Sbjct: 661 LKKAANHPYLFDGAEVRTDNSDEILKGLVMSSGKLVLLDKLLARLRQDGHRVLIFSQMVR 720
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++++R Y ++RLDG + ++ R +I HF+ + G+ F F++ST
Sbjct: 721 MLDILSDYMQMRGYQHQRLDGMVSSDARKKSIAHFN-----------SPGSPDFAFLLST 769
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE ++
Sbjct: 770 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLE 829
Query: 477 RAERKLRLSHNVV 489
RA++K+ L + ++
Sbjct: 830 RAKKKMVLEYAII 842
>gi|429963291|gb|ELA42835.1| hypothetical protein VICG_00150 [Vittaforma corneae ATCC 50505]
Length = 810
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 199/557 (35%), Positives = 297/557 (53%), Gaps = 88/557 (15%)
Query: 4 KERLQVAAKIIHDND-----------ERDGQTPVDAAEFG-----VTAELKPHQVEGLSW 47
K+ ++ AK I DN+ E PV+A F V L+ +Q+EGL+W
Sbjct: 3 KKTMRKYAKFIADNEFLKEFMPDVDLEDADSEPVEAYIFTYSPKYVRVTLRDYQIEGLNW 62
Query: 48 LIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAK 107
LI+ + G+N +L DEMGLGKTLQ I+FL YLKF + L+ P S W E +K
Sbjct: 63 LIKMHENGINCILADEMGLGKTLQTIAFLGYLKFVKDEKNKHLIAVPKSCLQNWHDEFSK 122
Query: 108 FTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLS 167
F P+++V I T +K++S++ + +D +LTTY++ L + +L
Sbjct: 123 FIPEMKV-----------KIFHTSKSEIKKESKV--LIDKNYDAILTTYEMCLFAKSYLK 169
Query: 168 QIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPS 227
+ W Y IIDEA RLKN +S L ++R F RLL+TGTP+QNN+ ELWAL++F +P
Sbjct: 170 DVNWSYIIIDEAHRLKNENSQLSKIVR-LFNFKHRLLLTGTPLQNNIHELWALLNFIVPD 228
Query: 228 VFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPP 287
F +F + +A K ++ L+ +L F LRR K + + +LM
Sbjct: 229 FFSNSEKFENYVLNA---------DKEEKSIEKLRNVLQLFFLRREKIDVEK--NLMAKK 277
Query: 288 LTEITV----LQKKVYASILRKELP-------------KLLALSSRTANHQSLQNTA--- 327
I +Q++ Y SIL+K+L ++ + NH L A
Sbjct: 278 YVNIYCPLSGMQREWYKSILKKDLSGIYLDRGIKTTLLNIVMQLKKCCNHPYLFEGAEPE 337
Query: 328 -----------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLD 376
SGK+++LD LL +L + G RVL+F+QM+Q LDIL+D+ R YSY R+D
Sbjct: 338 PFETGEHLIYNSGKMIILDKLLSRLKSKGSRVLIFSQMSQMLDILEDYAVFRDYSYCRID 397
Query: 377 GSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQ 436
G +E+R AAI ++ A +D F+F+++TRAGG+G+NL ADTVI ++
Sbjct: 398 GKTSSEDRTAAIEAYN-----------ALDSDKFLFLLTTRAGGLGINLYTADTVIIFDS 446
Query: 437 DWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDR 496
DWNPQ D QA RAHRIGQ V +T++T+EE I RA++KL+L D ++ +
Sbjct: 447 DWNPQADLQAQDRAHRIGQKKQVHVFRFITDNTIEEGIYLRAQQKLKLD-----DILIQK 501
Query: 497 EVKERTAVETDDLRSII 513
E K +V ++L I+
Sbjct: 502 EHKINHSVTENELMDIL 518
>gi|159131149|gb|EDP56262.1| chromodomain helicase (Chd1), putative [Aspergillus fumigatus
A1163]
Length = 1523
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 202/513 (39%), Positives = 278/513 (54%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 443 FLQNGELKDFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFIAWLRHVRRQQGPFI 502
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP--LP 148
V+ PLS W +TP L + Y G RTM +K+ M + +P
Sbjct: 503 VVVPLSTMPSWAETFDNWTPDLNYVVYNGNEAA-----RTM---LKDYELMIDGNPRRAK 554
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL D FLSQ W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 555 FNVLLTTYEYVLQDSTFLSQFKWQFMAVDEAHRLKNRDSQLYQKLLE-FKSPARLLITGT 613
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL ALM F P G ++ + +A +S ++ +L + +
Sbjct: 614 PIQNNLAELSALMDFLNP---GVIDVDVDMDLNAEAAS---------QKLAALTNAIQPY 661
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKEL--------------- 307
MLRRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 662 MLRRTKSK-VESD---LPPKTEKIIRVELSDVQLEYYKNILTKNYAALNDGAQGQKQSLL 717
Query: 308 --------------------PKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
K+L S+R + T+SGK+++LD LL KL GHR
Sbjct: 718 NIMMELKKASNHPFMFPNAEAKILEGSTRREDVLRALITSSGKMMLLDQLLAKLKRDGHR 777
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LD+L D++E R YSY+RLDG+I A R AI HF+ A G+
Sbjct: 778 VLIFSQMVKMLDLLGDYMESRGYSYQRLDGTIPAASRRLAIEHFN-----------APGS 826
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 827 SDFCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 886
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 887 DTVEEEVIERARNKLLLEFITIQRGVTDKEASE 919
>gi|345562119|gb|EGX45191.1| hypothetical protein AOL_s00173g292 [Arthrobotrys oligospora ATCC
24927]
Length = 1147
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 271/496 (54%), Gaps = 76/496 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +QV GL+WLI + G++ +L DEMGLGKTLQ ISF+ YL+F Q GP LV+
Sbjct: 172 IQGQMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTISFVGYLRFIQDIKGPHLVI 231
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP--FD 150
P S D W E A++ P++ L G +++R+ ++ N LP FD
Sbjct: 232 VPKSTLDNWKREFARWIPEIHTLVLQGAKDERQ--------------ELINQRLLPQDFD 277
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
V +T+Y++V+ ++ L + W Y I+DEA R+KN S L ++R F RLL+TGTP+
Sbjct: 278 VCITSYEMVMREKHHLKKFAWKYIIVDEAHRIKNEESSLSKIVR-MFESRGRLLITGTPL 336
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL ELWAL++F +P VF + F F+ + H L +L F+L
Sbjct: 337 QNNLHELWALLNFLLPDVFSSSEAFDEWFESSGHDQDTV--------VLQLHKVLRPFLL 388
Query: 271 RRTKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKELPKLLALS----------- 314
RR K + + +LP ++ +Q K Y +IL K++ L +
Sbjct: 389 RRVKADVEKS---LLPKKECNLYVGMSDMQIKQYRNILEKDIDALNGQNIGKRESKTRLL 445
Query: 315 ------SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L + A SGK+VVLD LLK++ G RVL+F+Q
Sbjct: 446 NIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVFNSGKMVVLDKLLKRMQEKGSRVLIFSQ 505
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R++ Y R+DGS E+R +AI ++ G++ F+F+
Sbjct: 506 MSRVLDILEDYCMFREFKYNRIDGSTAHEDRISAIDEYN-----------KPGSEKFIFL 554
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V +TE+ +EE
Sbjct: 555 LTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVHVYRFITENAIEEK 614
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA +KLRL V+
Sbjct: 615 IIERAAQKLRLDQLVI 630
>gi|403216874|emb|CCK71370.1| hypothetical protein KNAG_0G03130 [Kazachstania naganishii CBS
8797]
Length = 1047
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 278/500 (55%), Gaps = 69/500 (13%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
++ +F L+ +Q++GL+WLI + ++ +L DEMGLGKTLQ I+FL YL++ +
Sbjct: 112 TESPKFVEGGTLRDYQIQGLNWLISLHENKLSGILADEMGLGKTLQTIAFLGYLRYVKNV 171
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFLV+ P S D W E K+TP++ + G++E R I + K
Sbjct: 172 EGPFLVVVPKSTLDNWRREFNKWTPEVTAVVLQGDKESRGEIMNDVVMEAK--------- 222
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
FDVL+T+Y++++ ++ L + W Y IIDEA R+KN S L ++R F RLL+
Sbjct: 223 ---FDVLITSYEMIIREKNILKKFAWQYIIIDEAHRIKNEQSALSQIIR-LFYSKNRLLI 278
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGIL 265
TGTP+QNNL ELWAL++F +P VFG F F A +++ + +++ L +L
Sbjct: 279 TGTPLQNNLHELWALLNFLLPDVFGDSEVFDEWF--AENNTEQDQEVLVQQ----LHAVL 332
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL------------- 307
+ F+LRR K + + +LP + +T +Q + Y S+L +++
Sbjct: 333 NPFLLRRVKADVEKS---LLPKIETNVYVGMTDMQVQWYKSLLERDIDAVNGAVGKREGK 389
Query: 308 PKLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVL 349
+LL + + NH L A SGK+++LD LLK+L G RVL
Sbjct: 390 TRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVL 449
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM++ LDIL+D+ R Y R+DGS EER AI ++ + D
Sbjct: 450 IFSQMSRLLDILEDYCYFRDLEYCRIDGSTAHEERIEAIDDYNKPDS-----------DK 498
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF+++TRAGG+G+NLV ADTVI ++ DWNPQ D QA+ RAHRIGQ V VTE+
Sbjct: 499 FVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENA 558
Query: 470 VEEVIMRRAERKLRLSHNVV 489
+EE ++ RA +KLRL V+
Sbjct: 559 IEEKVIERAAQKLRLDQLVI 578
>gi|443721916|gb|ELU11024.1| hypothetical protein CAPTEDRAFT_167753 [Capitella teleta]
Length = 1643
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 195/493 (39%), Positives = 273/493 (55%), Gaps = 70/493 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q++GL+W++ + +V+L DEMGLGKT+Q ISF++ L GPFLV
Sbjct: 373 GRGLELRDYQLDGLNWMLNSWCKNNSVILADEMGLGKTIQVISFINSLMNLHQLYGPFLV 432
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E A + + V+ Y+G+ R IR + H+ + L F+V
Sbjct: 433 VVPLSTIASWQKEFALWAEDINVVVYLGDVSSRNMIREHEWCHLGNKR-------LKFNV 485
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
LLTTY+++L D+ FL + W + +DEA RLKN S+LY L F R+L+TGTP+Q
Sbjct: 486 LLTTYEILLKDKSFLGGVSWSFLGVDEAHRLKNDDSLLYKSLIS-FNTNMRMLITGTPLQ 544
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
N+L ELW+L+HF MPS F F K SA K G F +L L F+LR
Sbjct: 545 NSLKELWSLLHFIMPSKFHKWEDFEHKHK------SADKTG-----FRNLHQELEPFLLR 593
Query: 272 RTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRT-------- 317
R K+ + + LP T E++ +QK+ Y IL K K L+ R+
Sbjct: 594 RVKKDVEKS----LPAKTEQILRVEMSNIQKQYYKWILTKNY-KALSKGGRSNVSSFVNI 648
Query: 318 -------ANHQSLQNTAS-------GK-------LVVLDLLLKKLYNSGHRVLLFAQMTQ 356
NH L GK ++LD LL +L SGHRVL+F+QM +
Sbjct: 649 VMELKKCCNHGHLVRNPDLSDPAFKGKDPLEVIVKILLDKLLMRLKESGHRVLIFSQMVR 708
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL ++L +R++ ++RLDGSI+ E R A+ HF+ A G+D F F++ST
Sbjct: 709 LLDILAEYLTMRRFQFQRLDGSIKGEVRKQAMEHFN-----------AEGSDDFCFLLST 757
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ V LVT+ +VEE I+
Sbjct: 758 RAGGLGVNLATADTVIIFDSDWNPQNDLQAQARAHRIGQKKQVSVYRLVTKGSVEEDIVE 817
Query: 477 RAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 818 RAKKKMVLDHLVI 830
>gi|328699200|ref|XP_001946170.2| PREDICTED: chromatin-remodeling complex ATPase chain Iswi-like
[Acyrthosiphon pisum]
Length = 1051
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 186/492 (37%), Positives = 272/492 (55%), Gaps = 72/492 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
EL+ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 157 NGELRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVIV 216
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQR-RNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S WV+E K+ P + + +G+R+ R + IR T P +DV
Sbjct: 217 PKSTLQNWVNEFKKWCPTIRTVCMIGDRDTRVKFIRETFI-------------PGDWDVC 263
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y++++ ++ L +I W Y +IDEA R+KN S L ++RE F RLL+TGTP+QN
Sbjct: 264 ITSYEMIICERAVLRKIQWRYLVIDEAHRIKNEKSKLSEIIRE-FETTNRLLLTGTPLQN 322
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF + + F F ++++ + E+ L +L F+LRR
Sbjct: 323 NLHELWALLNFLLPDVFNSSDDFDQWF----NTNNCFGDNALIER---LHAVLRPFLLRR 375
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLA 312
K ++ + L P E+ V LQ++ Y +L K+ L +L
Sbjct: 376 LKAEVEK----RLKPKKEVKVYVGLSKLQREWYTKVLMKDIDVVNGAGKVEKMRLQNILM 431
Query: 313 LSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ +NH L + GK+VV D LLK L RVL+F+QMT+
Sbjct: 432 QLRKCSNHPYLFDGVEPGPPYTTDEHIVFNCGKMVVFDKLLKALKEQDSRVLVFSQMTRM 491
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
+DIL+D++ + Y+Y RLDG E+R I ++ ++ FVF++STR
Sbjct: 492 MDILEDYMHWKGYNYCRLDGQTPHEDRQRQINEYNEPNS-----------KKFVFILSTR 540
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
+GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE+TVEE I+ R
Sbjct: 541 SGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVER 600
Query: 478 AERKLRLSHNVV 489
AE KLRL V+
Sbjct: 601 AEVKLRLDKLVI 612
>gi|254567734|ref|XP_002490977.1| Nucleosome remodeling factor that functions in regulation of
transcription elongation [Komagataella pastoris GS115]
gi|238030774|emb|CAY68697.1| Nucleosome remodeling factor that functions in regulation of
transcription elongation [Komagataella pastoris GS115]
Length = 1387
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 192/502 (38%), Positives = 278/502 (55%), Gaps = 69/502 (13%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
EL+ Q+ GL+W+ + N +L DEMGLGKT+Q +SFLS+L F++ GP LV+
Sbjct: 350 NGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIFARRQYGPHLVVV 409
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP-FDVL 152
PLS W K+ P + + Y+G R+ IR YE + S P F+VL
Sbjct: 410 PLSTVPAWQETFEKWAPSVNTIYYMGNTNSRKMIRD--YEFF-----LPGKSKKPKFNVL 462
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ +L D+ L Q W + +DEA RLKN S LY L + F + RLL+TGTP+QN
Sbjct: 463 LTTYEYILKDRAELGQFKWQFLAVDEAHRLKNAESSLYESLFD-FKIANRLLITGTPLQN 521
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
N+ EL AL++F MP F T+ Q + ++S + IK+ L+ + F+LRR
Sbjct: 522 NIKELAALVNFLMPGKF-TIEQEID-----FETASEEQETYIKD----LQSKIHPFILRR 571
Query: 273 TKQKLVECGHLMLPPL--TEITVLQKKVYASILRKEL------PK--------LLALSSR 316
K+ + + H + E++ LQ Y +IL K PK ++A +
Sbjct: 572 LKKDVEKSLHSKTERILRVELSDLQTHYYKNILTKNYAALNAGPKEAQISLLNVMAELKK 631
Query: 317 TANHQSLQNTA-----------------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
T+NH L + A SGK+V+LD LL +L GHRVL+F+Q
Sbjct: 632 TSNHPYLFDGAEEQVLANLGSSSRENIFRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQ 691
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M + LDIL D+L + YS++RLDG++ + R AI HF+ A G+ FVF+
Sbjct: 692 MVRMLDILGDYLTFKGYSFQRLDGTVPSARRRVAIDHFN-----------ADGSQDFVFL 740
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ V++ TVEE
Sbjct: 741 LSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEE 800
Query: 474 IMRRAERKLRLSHNVVGDDVVD 495
++ RA +K+ L + ++ + D
Sbjct: 801 VLERARKKMILEYAIISLGISD 822
>gi|226290256|gb|EEH45740.1| chromodomain helicase hrp3 [Paracoccidioides brasiliensis Pb18]
Length = 1521
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 206/513 (40%), Positives = 280/513 (54%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
+ + ELK QV+G++++ ++ G NV+L DEMGLGKT+Q ++F+S+L+ + GPF+
Sbjct: 459 YVMNGELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFISWLRHVRNQQGPFI 518
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W +TP L + Y G E RNI + YE + + NV F
Sbjct: 519 VVVPLSTMPSWAETFDNWTPDLNYVVYNGN-EVSRNIIKD-YELLMD----GNVRRPKFH 572
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLTTY+ VL+D FLSQI W + +DEA RLKN S LY+ L E F P RLL+TGTP+
Sbjct: 573 VLLTTYEYVLVDATFLSQIKWQFMAVDEAHRLKNRDSQLYSRLVE-FKSPSRLLITGTPV 631
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL ALM F LN L D + S K+ E S++ +ML
Sbjct: 632 QNNLGELSALMDF--------LNPGLIQIDDDMDLSCEAASVKLAELTKSIQ----PYML 679
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRTANHQSLQ 324
RRTK K VE LPP + E++ +Q + Y +IL K L S QSL
Sbjct: 680 RRTKSK-VESD---LPPKSEKIIRVELSDVQLEYYKNILTKNYAALNQGSK--GQKQSLL 733
Query: 325 N-------------------------------------TASGKLVVLDLLLKKLYNSGHR 347
N T+SGK+++LD LL KL GHR
Sbjct: 734 NIMMELKKASNHPFMFPNAESRILEGKTGREEMMRAIITSSGKMMLLDQLLAKLRKDGHR 793
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++++R Y+Y+RLDG+I A R +I HF+ + N
Sbjct: 794 VLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRRLSIEHFNAPDS----------N 843
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
D F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 844 D-FAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSK 902
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 903 DTVEEEVLERARNKLLLEFITIQRGVTDKEAIE 935
>gi|328872835|gb|EGG21202.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
Length = 1993
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 182/498 (36%), Positives = 282/498 (56%), Gaps = 79/498 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LKP+Q++GL W++ Y +N +L DEMGLGKT+Q I+ ++YL + + GP+LV+ P
Sbjct: 992 GQLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALITYLMEKKQNKGPYLVVVP 1051
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W E +K+ PK+ + Y G++E +R+++Y+ ++++P F+VL+T
Sbjct: 1052 LSTLANWGQEFSKWAPKVLKVLYYGKKE----VRKSLYD--------THIAPTKFNVLVT 1099
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ ++ D+ LS+I W Y IIDE R+KN SS L +L + R+L+TGTP+QN+L
Sbjct: 1100 TYEYIIKDKNMLSKIKWNYLIIDEGHRMKNYSSKLSIILGNAYHSRYRILLTGTPLQNSL 1159
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSAFM 269
ELWAL++F +P++F +++ F F ++ A ++ ++ E+ L +L F+
Sbjct: 1160 PELWALLNFLLPNIFDSVDDFEQWF----NAPFAGEKLEMNEEEQLLIIQRLHKVLRPFL 1215
Query: 270 LRRTK-----------QKLVECGHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRTA 318
LRR K +K+++C E++ Q K+Y I K + KL
Sbjct: 1216 LRRLKTEVETQLPDKVEKVLKC---------EMSAFQAKMYQLIRSKSVNKLNQEEGAPR 1266
Query: 319 NHQSLQNT---------------------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
+ L+NT ++GK +LD +L KL SGHRVL+F
Sbjct: 1267 LARGLKNTLVQLRKVCNHPYLFYDEEYAIDEYMIRSAGKFDLLDKILPKLKASGHRVLIF 1326
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT +DIL+ + + Y Y RLDGS ++EER + F+ A G+D F+
Sbjct: 1327 SQMTHLIDILEHYFTYKGYKYLRLDGSTKSEERGPMLNLFN-----------APGSDLFI 1375
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+GLNL ADTVI ++ DWNPQ+D QA RAHRIGQ V + LVT ++VE
Sbjct: 1376 FVLSTRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVKVLRLVTVNSVE 1435
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RA K L ++
Sbjct: 1436 EKILARAIFKKELDKKII 1453
>gi|328352490|emb|CCA38889.1| chromodomain-helicase-DNA-binding protein 1 [Komagataella pastoris
CBS 7435]
Length = 1387
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 192/502 (38%), Positives = 278/502 (55%), Gaps = 69/502 (13%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
EL+ Q+ GL+W+ + N +L DEMGLGKT+Q +SFLS+L F++ GP LV+
Sbjct: 350 NGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIFARRQYGPHLVVV 409
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP-FDVL 152
PLS W K+ P + + Y+G R+ IR YE + S P F+VL
Sbjct: 410 PLSTVPAWQETFEKWAPSVNTIYYMGNTNSRKMIRD--YEFF-----LPGKSKKPKFNVL 462
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ +L D+ L Q W + +DEA RLKN S LY L + F + RLL+TGTP+QN
Sbjct: 463 LTTYEYILKDRAELGQFKWQFLAVDEAHRLKNAESSLYESLFD-FKIANRLLITGTPLQN 521
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
N+ EL AL++F MP F T+ Q + ++S + IK+ L+ + F+LRR
Sbjct: 522 NIKELAALVNFLMPGKF-TIEQEID-----FETASEEQETYIKD----LQSKIHPFILRR 571
Query: 273 TKQKLVECGHLMLPPL--TEITVLQKKVYASILRKEL------PK--------LLALSSR 316
K+ + + H + E++ LQ Y +IL K PK ++A +
Sbjct: 572 LKKDVEKSLHSKTERILRVELSDLQTHYYKNILTKNYAALNAGPKEAQISLLNVMAELKK 631
Query: 317 TANHQSLQNTA-----------------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
T+NH L + A SGK+V+LD LL +L GHRVL+F+Q
Sbjct: 632 TSNHPYLFDGAEEQVLANLGSSSRENIFRGLIMSSGKMVLLDKLLTRLKKDGHRVLIFSQ 691
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M + LDIL D+L + YS++RLDG++ + R AI HF+ A G+ FVF+
Sbjct: 692 MVRMLDILGDYLTFKGYSFQRLDGTVPSARRRVAIDHFN-----------ADGSQDFVFL 740
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ V++ TVEE
Sbjct: 741 LSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTVEEE 800
Query: 474 IMRRAERKLRLSHNVVGDDVVD 495
++ RA +K+ L + ++ + D
Sbjct: 801 VLERARKKMILEYAIISLGISD 822
>gi|119495934|ref|XP_001264742.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL
181]
gi|119412904|gb|EAW22845.1| chromodomain helicase (Chd1), putative [Neosartorya fischeri NRRL
181]
Length = 1523
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 201/513 (39%), Positives = 278/513 (54%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 443 FLQNGELKDFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFIAWLRHVRRQQGPFI 502
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP--LP 148
V+ PLS W ++P L + Y G RTM +K+ M + +P
Sbjct: 503 VVVPLSTMPSWAETFDNWSPDLNYVVYNGNEAA-----RTM---LKDYELMIDGNPRRAK 554
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL D FLSQ W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 555 FNVLLTTYEYVLQDSTFLSQFKWQFMAVDEAHRLKNRDSQLYQKLLE-FRSPARLLITGT 613
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL ALM F P G ++ + +A +S ++ +L + +
Sbjct: 614 PIQNNLAELSALMDFLNP---GVIDVDVDMDLNAEAAS---------QKLAALTNAIQPY 661
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKEL--------------- 307
MLRRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 662 MLRRTKSK-VESD---LPPKTEKIIRVELSDVQLEYYKNILTKNYAALNDGAQGQKQSLL 717
Query: 308 --------------------PKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
K+L S+R + T+SGK+++LD LL KL GHR
Sbjct: 718 NIMMELKKASNHPFMFPNAEAKILEGSTRREDVLRALITSSGKMMLLDQLLAKLKRDGHR 777
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LD+L D++E R YSY+RLDG+I A R AI HF+ A G+
Sbjct: 778 VLIFSQMVKMLDLLGDYMESRGYSYQRLDGTIPAASRRLAIEHFN-----------APGS 826
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 827 SDFCFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 886
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 887 DTVEEEVIERARNKLLLEFITIQRGVTDKEASE 919
>gi|307109767|gb|EFN58004.1| hypothetical protein CHLNCDRAFT_34395 [Chlorella variabilis]
Length = 1019
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 192/534 (35%), Positives = 296/534 (55%), Gaps = 75/534 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +Q++GL+WLI Y G+N +L DEMGLGKTLQ IS L YL+ + GP +V+ P
Sbjct: 115 GKMREYQLQGLNWLIHLYDNGINGILADEMGLGKTLQTISLLGYLREFRGITGPHMVIVP 174
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E ++ P ++ +++ G RE+R N + + P FDV++T
Sbjct: 175 KSTLHNWLNEFKRWCPVIKAVKFHGNREERENQKNGI------------CQPGKFDVVVT 222
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++V+ ++ + W Y IIDEA R+KN +S L V+R R+L+TGTP+QNNL
Sbjct: 223 SYEMVIKEKNHWRKFHWRYIIIDEAHRIKNENSRLSQVVR-LLKTNYRMLITGTPLQNNL 281
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + +F F+ K G+ E L +L F+LRR K
Sbjct: 282 HELWALLNFLLPEVFSSAEKFDEWFQ-----MGDSKEGEA-EVVQQLHKVLRPFLLRRLK 335
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRT----------- 317
+ + LPP E ++ +Q+K YA++L+K++ + + R+
Sbjct: 336 SDVEKS----LPPKKETILKIGMSEMQRKYYAALLQKDMDAVTGGADRSRLLNIVMQLRK 391
Query: 318 -ANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L A +GK+V+LD LL KL + G RVL+F+QMT+ +DIL
Sbjct: 392 CCNHPYLFQGAEPGPPYLTGDHLVENAGKMVLLDKLLPKLQSRGSRVLIFSQMTRMIDIL 451
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D+ R+Y Y R+DG+ E+R +S I+ +GG FVF++STRAGG+
Sbjct: 452 EDYCLYRQYGYCRIDGNTSGEDR---------ESQIDDYNKASGGR--FVFLLSTRAGGL 500
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE---VIMRRA 478
G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V T+H++EE ++ +A
Sbjct: 501 GINLYTADIVILYDSDWNPQMDLQAMDRAHRIGQKKEVQVFRFCTDHSIEEKATCVIEKA 560
Query: 479 ERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLH-LFDPKAINNEESD 530
+KLRL V+ R V+ +V +DL S++ +G +F +A N + D
Sbjct: 561 YKKLRLDALVIQQ---GRLVENTKSVNKEDLLSMVRYGAERVFSSEAANITDED 611
>gi|225682812|gb|EEH21096.1| chromodomain helicase hrp1 [Paracoccidioides brasiliensis Pb03]
Length = 1521
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 206/513 (40%), Positives = 280/513 (54%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
+ + ELK QV+G++++ ++ G NV+L DEMGLGKT+Q ++F+S+L+ + GPF+
Sbjct: 459 YVMNGELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFISWLRHVRNQQGPFI 518
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W +TP L + Y G E RNI + YE + + NV F
Sbjct: 519 VVVPLSTMPSWAETFDNWTPDLNYVVYNGN-EVSRNIIKD-YELLMD----GNVRRPKFH 572
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLTTY+ VL+D FLSQI W + +DEA RLKN S LY+ L E F P RLL+TGTP+
Sbjct: 573 VLLTTYEYVLVDATFLSQIKWQFMAVDEAHRLKNRDSQLYSRLVE-FKSPSRLLITGTPV 631
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL ALM F LN L D + S K+ E S++ +ML
Sbjct: 632 QNNLGELSALMDF--------LNPGLIQIDDDMDLSCEAASVKLAELTKSIQ----PYML 679
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRTANHQSLQ 324
RRTK K VE LPP + E++ +Q + Y +IL K L S QSL
Sbjct: 680 RRTKSK-VESD---LPPKSEKIIRVELSDVQLEYYKNILTKNYAALNQGSK--GQKQSLL 733
Query: 325 N-------------------------------------TASGKLVVLDLLLKKLYNSGHR 347
N T+SGK+++LD LL KL GHR
Sbjct: 734 NIMMELKKASNHPFMFPNAESRILEGKTGREEMMRAIITSSGKMMLLDQLLAKLRKDGHR 793
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++++R Y+Y+RLDG+I A R +I HF+ + N
Sbjct: 794 VLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRRLSIEHFNAPDS----------N 843
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
D F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 844 D-FAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSK 902
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 903 DTVEEEVLERARNKLLLEFITIQRGVTDKEAIE 935
>gi|190348362|gb|EDK40804.2| hypothetical protein PGUG_04902 [Meyerozyma guilliermondii ATCC
6260]
Length = 1034
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 190/515 (36%), Positives = 286/515 (55%), Gaps = 72/515 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+WLI Y ++ +L DEMGLGKTLQ I+FL YL++ + GPF+++ P S
Sbjct: 122 LREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTIAFLGYLRYIKNIDGPFIIIVPKS 181
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
D W E A++TP+++ + G ++ R E +K ++ FDVL+T++
Sbjct: 182 TLDNWRREFARWTPEVKAVVLQGNKDDRA-------EFIKNCLLQAD-----FDVLITSF 229
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ L + W Y ++DEA R+KN S L ++R F RLL+TGTP+QNNL E
Sbjct: 230 EMVMREKSQLKKFRWQYIVVDEAHRIKNEDSSLSQIIR-LFYSKNRLLITGTPLQNNLHE 288
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P VFG F F+ S + + G + L +LS F+LRR K
Sbjct: 289 LWALLNFLLPDVFGDSEVFDEWFE----SQGSKEEGNQDKVVQQLHKVLSPFLLRRVKSD 344
Query: 277 LVECGHLMLPPL-----TEITVLQKKVYASILRKEL-------------PKLLALS---S 315
VE +LP + +T +Q + Y +L K++ +LL +
Sbjct: 345 -VETS--LLPKIETNVYCGMTEMQIRWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLR 401
Query: 316 RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
+ NH L + A SGK+++LD +LKK G RVL+F+QM++ LDI
Sbjct: 402 KCCNHPYLFDGAEPGPPYTTDEHLAYNSGKMIILDKMLKKFREQGSRVLIFSQMSRLLDI 461
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L+D+ LR Y Y R+DGS E+R AI ++ A +D F+F+++TRAGG
Sbjct: 462 LEDYCYLRDYEYCRIDGSTAHEDRIEAIDSYN-----------APDSDKFIFLLTTRAGG 510
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL +AD VI Y+ DWNPQ D QA+ RAHRIGQ V VTE+ +EE ++ RA +
Sbjct: 511 LGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVLERAAQ 570
Query: 481 KLRLSHNVVGDDVVDREVKERTAV--ETDDLRSII 513
KLRL V+ R+V A+ DDL +I
Sbjct: 571 KLRLDQLVIQQ---GRQVTNANAIGNSKDDLLGMI 602
>gi|268553029|ref|XP_002634497.1| Hypothetical protein CBG08287 [Caenorhabditis briggsae]
Length = 1480
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/497 (38%), Positives = 279/497 (56%), Gaps = 72/497 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+LKP+Q++GL W++ Y +N +L DEMGLGKT+Q IS L+YL + + GP+LV+ PL
Sbjct: 530 QLKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLLTYLMEVKQNNGPYLVIVPL 589
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W SE AK+ P ++ + Y G ++ RR + + Q+ V F+VL+TT
Sbjct: 590 STLSNWQSEFAKWAPNVKSVIYKGTKDARRRV----------EGQIRKVD---FNVLMTT 636
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+ V+ ++ L +I W Y IIDE RLKN +S L N+L F RLL+TGTP+QN L
Sbjct: 637 YEYVIKEKSLLGKIRWKYMIIDEGHRLKNHNSKLTNMLNGFFHAQHRLLLTGTPLQNKLP 696
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ----FTSLKGILSAFMLR 271
ELWAL++F +PS+F + + F F +A +++ K +E+ L +L F+LR
Sbjct: 697 ELWALLNFLLPSIFSSCDTFEQWF-NAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLR 755
Query: 272 RTKQKLVECGHLMLPPLTE------ITVLQKKVY------------ASILRKELPKLLAL 313
R K K VE LP TE ++ LQK +Y AS + L +
Sbjct: 756 RLK-KEVESE---LPDKTEYVIKCDMSALQKVIYRHMKKGLLLDAKASSGARSLSNTIVH 811
Query: 314 SSRTANH----QSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
+ NH Q+++++ +GKL +LD +L KL SGHRVL+F
Sbjct: 812 LRKLCNHPFLFQNIEDSCRAHWKVNEVNGKELMRVAGKLELLDRILPKLKASGHRVLMFF 871
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QMT+ +DI +DFL R Y+Y RLDGS + +ER + LY+ A ++ F+F
Sbjct: 872 QMTKMMDIFEDFLHFRNYTYLRLDGSTKPDERGDLL----------SLYN-APDSEYFLF 920
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
M+STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ V + L+T ++VEE
Sbjct: 921 MLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEE 980
Query: 473 VIMRRAERKLRLSHNVV 489
++ A KL + V+
Sbjct: 981 KMLAVARYKLNVDEKVI 997
>gi|296414511|ref|XP_002836943.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632788|emb|CAZ81134.1| unnamed protein product [Tuber melanosporum]
Length = 1444
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/520 (36%), Positives = 274/520 (52%), Gaps = 79/520 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q++GL+WL + G N +L DEMGLGKT+Q ++F+S+L+ + GPFLV+ P
Sbjct: 426 GELRDFQMKGLNWLAYNWTNGNNGILADEMGLGKTVQTVAFMSWLRHDRHQHGPFLVVVP 485
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W + + P + + Y G + R IR+ YE + ++ + F+ ++T
Sbjct: 486 LSTVPSWAETLENWAPDMNFIVYTGTGKAREVIRK--YEMFAD----PGMTKVKFNCMVT 539
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D L I W + +DEA RLKN S LY+ L F P RLL+TGTP+QNNL
Sbjct: 540 TYEYILNDFATLGNIKWQFLAVDEAHRLKNKESALYDKL-NVFKAPCRLLITGTPLQNNL 598
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL+ F MP N KDA Q L+ L +MLRR K
Sbjct: 599 KELGALVDFLMPGKISIDNDVDLQSKDA------------GRQIEQLQQALKPYMLRRVK 646
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRTANHQSLQNT-- 326
+ + + LP T E++ +Q + Y +I+ + L A + T QSL N
Sbjct: 647 KSVEKS----LPGKTEKIIRVELSDVQTEYYKAIITRNYAALNAGA--TGPKQSLLNIVM 700
Query: 327 -----------------------------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
+SGK+V+LD LL KL HRVL+F
Sbjct: 701 ELKKISNHPFMFPPAEQRILGGSNRREDVLKALIMSSGKMVLLDQLLTKLKADNHRVLVF 760
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QM LDIL D+L L+ +S++RLDG+I A R AI HF+ + + F
Sbjct: 761 SQMVHMLDILADYLNLKGFSFQRLDGTIAAGPRRIAIDHFNAPESPD-----------FC 809
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ HV+ LV++ T+E
Sbjct: 810 FLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQKAHVMVYRLVSKDTIE 869
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRS 511
E ++ RA K+ L H V+ V D+ + ++ +TD L S
Sbjct: 870 EEVLERARNKMILEHLVISLGVTDKGITDKVKKKTDRLES 909
>gi|405976812|gb|EKC41296.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Crassostrea gigas]
Length = 1371
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/493 (37%), Positives = 267/493 (54%), Gaps = 74/493 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + P P LV+C
Sbjct: 494 AGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHYKHIPSPHLVIC 553
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W +E ++ P + + +G ++QR R + + P +DV +
Sbjct: 554 PKSTLANWQAEFKRWCPSIRAVCLIGNQDQRTAFIRDV------------MMPGDWDVCI 601
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNN
Sbjct: 602 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNN 660
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFK--DAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
L ELWAL++F +P VF + F S F + + ++ +R L +L F+LR
Sbjct: 661 LHELWALLNFLLPDVFNSSEDFDSWFNTNNCIGDTALVER---------LHEVLRPFLLR 711
Query: 272 RTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLL 311
R K + + L P EI + +Q++ Y IL K+ L +L
Sbjct: 712 RLKSDVEKA----LLPKKEIKIFVGLSKMQREWYTKILMKDIDVVNGAGKSDKMRLLNIL 767
Query: 312 ALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L + A SGK+ +LD LL KL + RVL+F+QMT+
Sbjct: 768 MQLRKCANHPYLFDGAEPGPPYTTDKHLFENSGKMAILDKLLPKLQDQDSRVLIFSQMTR 827
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R Y Y RLDG E+R I F++ ++ F+FM+ST
Sbjct: 828 MLDILEDYCHWRGYDYCRLDGQTPHEDRTKYINDFNMPNS-----------SKFIFMLST 876
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
R+GG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +TE+TVEE I+
Sbjct: 877 RSGGLGINLATADIVIIYDSDWNPQVDLQAMDRAHRIGQKKQVKVFRFITENTVEERIVE 936
Query: 477 RAERKLRLSHNVV 489
+AE KLRL + V+
Sbjct: 937 KAEMKLRLDNVVI 949
>gi|169612371|ref|XP_001799603.1| hypothetical protein SNOG_09308 [Phaeosphaeria nodorum SN15]
gi|160702496|gb|EAT83500.2| hypothetical protein SNOG_09308 [Phaeosphaeria nodorum SN15]
Length = 1333
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/544 (35%), Positives = 293/544 (53%), Gaps = 49/544 (9%)
Query: 12 KIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQ 71
+I H N E Q A V LK +QV+GL W++ Y +N +L DEMGLGKT+Q
Sbjct: 527 EIAHRNKEEVTQ----QASILVGGTLKEYQVKGLQWMVSLYNNNLNGILADEMGLGKTIQ 582
Query: 72 AISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTM 131
IS ++YL + PGP+LV+ PLS W +E K+ P + + Y G QR+
Sbjct: 583 TISLITYLIEKKRQPGPYLVIVPLSTLTNWNNEFEKWAPTVSKITYKGPPNQRK-----Q 637
Query: 132 YEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYN 191
Y+ Q F VLLTTY+ ++ D+ LS+I W + I+DE R+KN S L
Sbjct: 638 YQQQIRWGQ--------FQVLLTTYEFIIKDRPILSKIKWVHMIVDEGHRMKNAGSKLSV 689
Query: 192 VLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKR 251
+ +++ RL++TGTP+QNNL+ELWA+++F +P++F + F F ++ +
Sbjct: 690 TITQYYTTRYRLILTGTPLQNNLTELWAMLNFVLPTIFKSATSFDEWFNTPFANTGGQDK 749
Query: 252 GKIKEQ-----FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITVLQKKVYASILRKE 306
++ E+ L +L F+LRR K K VE P + L+K + ++
Sbjct: 750 MELTEEEQLLVIKRLHKVLRPFLLRRLK-KDVEKDLPDKDPKAASSSLRKLCNHPFVFEQ 808
Query: 307 LPKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLE 366
+ +++ + T + L ASGK +LD +L K +GHRVL+F QMTQ ++I++D+L
Sbjct: 809 VEEVMNPTKSTND---LLWRASGKFELLDRILPKFEKTGHRVLMFFQMTQIMNIMEDYLR 865
Query: 367 LRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLV 426
LR Y RLDG+ +A++R ++ F+ A + F F++STRAGG+GLNL
Sbjct: 866 LRGMKYMRLDGATKADDRSELLKEFN-----------APNSPYFCFLLSTRAGGLGLNLQ 914
Query: 427 AADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSH 486
ADTVI Y+ DWNP D QA RAHRIGQ N V + L+T ++VEE I+ RA KL +
Sbjct: 915 TADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERANYKLDMDG 974
Query: 487 NVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIA 546
V+ D + T++ R + + L +A + E +++ LN +I
Sbjct: 975 KVIQAGKFDNK-------STNEERDAMLRIMLESAEAAESLEQEEMDDDDLN-----LIM 1022
Query: 547 MRHE 550
MR+E
Sbjct: 1023 MRNE 1026
>gi|295669680|ref|XP_002795388.1| chromodomain helicase hrp3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285322|gb|EEH40888.1| chromodomain helicase hrp3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1520
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 206/510 (40%), Positives = 278/510 (54%), Gaps = 79/510 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
ELK QV+G++++ ++ G NV+L DEMGLGKT+Q ++F+S+L+ + GPF+V+
Sbjct: 461 NGELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFISWLRHVRNQQGPFIVVV 520
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
PLS W +TP L + Y G E RNI + YE + + NV F VLL
Sbjct: 521 PLSTMPSWAETFDNWTPDLNYVVYNGN-EVSRNIIKD-YELLMD----GNVRRPKFHVLL 574
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+ VL+D FLSQI W + +DEA RLKN S LY+ L E F P RLL+TGTP+QNN
Sbjct: 575 TTYEYVLVDATFLSQIKWQFMAVDEAHRLKNRDSQLYSRLVE-FKSPSRLLITGTPVQNN 633
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L EL ALM F LN L D + S K+ E S++ +MLRRT
Sbjct: 634 LGELSALMDF--------LNPGLIQIDDDMDLSCEAAGVKLAELTKSIQ----PYMLRRT 681
Query: 274 KQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRTANHQSLQN-- 325
K K VE LPP + E++ +Q + Y +IL K L S QSL N
Sbjct: 682 KSK-VESD---LPPKSEKIIRVELSDVQLEYYKNILTKNYAALNQGSK--GQKQSLLNIM 735
Query: 326 -----------------------------------TASGKLVVLDLLLKKLYNSGHRVLL 350
T+SGK+++LD LL KL GHRVL+
Sbjct: 736 MELKKASNHPFMFPNAESRILEGKTGREEMMRAIITSSGKMMLLDQLLAKLRKDGHRVLI 795
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM + LDIL D++++R Y+Y+RLDG+I A R +I HF+ + ND F
Sbjct: 796 FSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRRLSIEHFNAPDS----------ND-F 844
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++ TV
Sbjct: 845 AFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTV 904
Query: 471 EEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
EE ++ RA KL L + V D+E E
Sbjct: 905 EEEVLERARNKLLLEFITIQRGVTDKEAIE 934
>gi|328786333|ref|XP_001120496.2| PREDICTED: chromodomain-helicase-DNA-binding protein 1 [Apis
mellifera]
Length = 1667
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 300/541 (55%), Gaps = 75/541 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G L+ +Q++GL+W+I + +V+L DEMGLGKT+Q I FL YL + GPFL+
Sbjct: 347 GRDLTLRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTHQLYGPFLL 406
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W EM+++ P + + Y+G+ R IR + + ++ L F+
Sbjct: 407 VVPLSTMTSWQREMSQWAPDMNFVTYLGDVTSRNVIREYEWCYSSKR--------LKFNA 458
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
+LTTY++VL D+ FL + W ++DEA RLKN S+LY L E F RLL+TGTP+Q
Sbjct: 459 ILTTYEIVLKDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAE-FHTNHRLLITGTPLQ 517
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
N+L ELWAL+HF MP+ FG+ +F + H ++A K ++ L L F+LR
Sbjct: 518 NSLKELWALLHFIMPTKFGSWEEF-----EKEHDNAAQK------GYSKLHKQLEPFILR 566
Query: 272 RTKQKLVECGHLMLPPL--TEITVLQKKVYASILRK---------------------ELP 308
R K+ + + + + E+T LQK+ Y IL K EL
Sbjct: 567 RVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTMTFLNIVIELK 626
Query: 309 KLLA---LSSRTANHQSLQNT--------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
K L+ T N + N SGKLV+LD LL +L +GHRVL+F+QM +
Sbjct: 627 KCCNHAFLTKPTENERKDNNEDYLQQLIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRM 686
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL ++L+ + + ++RLDGSI+ E R A+ HF+ A G+ F F++STR
Sbjct: 687 LDILGEYLQKKHFPFQRLDGSIKGELRKQALDHFN-----------AEGSQDFCFLLSTR 735
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+++VEE I+ R
Sbjct: 736 AGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVER 795
Query: 478 AERKLRLSHNVVGD-DVVDREVKERTAVETD-------DLRSII-FGLH-LFDPKAINNE 527
A++K+ L H V+ D R V ++ T+ DL +I+ FG LF + +E
Sbjct: 796 AKQKMVLDHLVIQRMDTTGRTVLDKKNAGTNNNPFNKEDLNAILKFGAEDLFKDEEDGDE 855
Query: 528 E 528
E
Sbjct: 856 E 856
>gi|340380649|ref|XP_003388834.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 homolog
[Amphimedon queenslandica]
Length = 1451
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 205/545 (37%), Positives = 288/545 (52%), Gaps = 83/545 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L P+Q+EG++W+ + N +L DEMGLGKT+Q ISFL L + GPFL+ PLS
Sbjct: 217 LHPYQLEGINWIRFSWAQNTNTILADEMGLGKTIQTISFLYSLVKEGHTNGPFLISAPLS 276
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV--------KEQSQMSNVSPLP 148
W E + P L V+ Y G ++ R IR + V K+ ++ P+
Sbjct: 277 TIINWEREFEFWAPDLYVVTYHGSKDNRAIIREHEFSFVSGAVKGTSKQLQRVKKDLPIK 336
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLT+Y+ V +D L I W ++DEA RLKN S + VL + + + +LL+TGT
Sbjct: 337 FNVLLTSYEYVSVDATVLQSINWAVLVVDEAHRLKNNQSKFFRVLSQ-YKIKYKLLLTGT 395
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QNNL EL+ L++F F +L +F F D ++Q + L +L+
Sbjct: 396 PLQNNLEELFHLLNFLSRDNFNSLEEFQEEFADISK----------EDQVSKLHDMLAPH 445
Query: 269 MLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSR------ 316
+LRR K +++ +P TE+ V +QKK Y IL K KL ++
Sbjct: 446 LLRRLKADVLKN----IPSKTELIVRVDLAPMQKKFYRWILTKNFEKLNTKGAKPVSLIN 501
Query: 317 -------TANHQSLQNTA--------------------SGKLVVLDLLLKKLYNSGHRVL 349
+NH L TA SGKL+VL+ +LKKL SGHRVL
Sbjct: 502 IMMDLKKCSNHPYLFPTAAEEAPLTAGGYYEGTALIASSGKLIVLEKMLKKLKESGHRVL 561
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QMT+ LDIL+DFLE Y YER+DG + ER Q I+R A G +
Sbjct: 562 IFSQMTKMLDILEDFLEHLSYKYERIDGGVTGSER---------QQCIDRF--NAPGAEQ 610
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL +ADTVI ++ DWNP D QA RAHRIGQ N V+ VT ++
Sbjct: 611 FVFLLSTRAGGLGINLASADTVIIFDSDWNPHNDVQAFSRAHRIGQANKVMIYRFVTRNS 670
Query: 470 VEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDLRSIIFGLH-LFDPKAI 524
VEE + A+RK+ L+H VV G + +R E DD+ + FG LF +
Sbjct: 671 VEERVCEVAKRKMMLTHLVVRGGLGSTTNQPSLSKR---ELDDI--LKFGTQDLFKDQGQ 725
Query: 525 NNEES 529
+ EES
Sbjct: 726 DGEES 730
>gi|390602569|gb|EIN11962.1| hypothetical protein PUNSTDRAFT_99321 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1434
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/493 (38%), Positives = 267/493 (54%), Gaps = 74/493 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK Q+ GL+WL + G N +L DEMGLGKT+Q +SF+SYL GPFLV+ P
Sbjct: 385 GKLKDFQLTGLNWLAYLWSKGENGILADEMGLGKTVQTVSFISYLFHEMQQYGPFLVIVP 444
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W S+ A + P + V+ Y+G R IR YE + L +VLLT
Sbjct: 445 LSTITAWQSQFATWAPDINVITYIGTAAARDVIR--TYEFGPSNKK------LKMNVLLT 496
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++ L D L +I W +DEA RLKN S LY LR F +LL+TGTP+QNN+
Sbjct: 497 TYELTLRDSKELGEIKWQMLAVDEAHRLKNSESQLYEALRS-FSAASKLLITGTPLQNNV 555
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F N+F D H +E+ L L + MLRR K
Sbjct: 556 KELLSLMHFLMPEKFALTNEF--DLTDVDH----------EEKIKDLHKQLESLMLRRLK 603
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALS-------------- 314
+ ++ LP +E ++ LQ + Y +IL K L+ +
Sbjct: 604 RDVLTS----LPTKSERILRVEMSALQTQFYKNILTKNFQGLMKSAHGNSQISLLNIAVE 659
Query: 315 -SRTANHQSL--------QNT---------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L +N +SGK+V+LD LL +L GHRVL+F+QM +
Sbjct: 660 LKKAANHPFLFDGVEGKTENAEETLKGLVMSSGKMVLLDKLLARLRQDGHRVLIFSQMVR 719
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++ LR Y ++RLDG + +E R +I HF+ ++ + F F++ST
Sbjct: 720 MLDILSDYMSLRGYLHQRLDGMVASEARKKSIAHFNAPNSPD-----------FAFLLST 768
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE ++
Sbjct: 769 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLE 828
Query: 477 RAERKLRLSHNVV 489
RA++K+ L + ++
Sbjct: 829 RAKKKMVLEYAII 841
>gi|349576620|dbj|GAA21791.1| K7_Isw1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1129
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/517 (37%), Positives = 282/517 (54%), Gaps = 69/517 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++G++WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 192 VNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVI 251
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP + G++E+R + + + FDV+
Sbjct: 252 APKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQ------------KKLLGCDFDVV 299
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 300 IASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 358
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + KI +Q L +L F+LRR
Sbjct: 359 NLHELWALLNFLLPDIFSDAQDFDDWFS---SESTEEDQDKIVKQ---LHTVLQPFLLRR 412
Query: 273 TKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL-------------PKLLALS-- 314
K VE L L ++ +QKK Y IL K+L +LL +
Sbjct: 413 IKSD-VETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQ 471
Query: 315 -SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQMTQ 356
+ NH L + A G D L +YN+ G RVL+F+QM++
Sbjct: 472 LRKCCNHPYLFDGAEPGPPYTTDEHL--VYNAAKLQVLDKLLKKLKGEGSRVLIFSQMSR 529
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+++T
Sbjct: 530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYN-----------APDSKKFVFLLTT 578
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+
Sbjct: 579 RAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 638
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + + KE A D L S+I
Sbjct: 639 RATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMI 675
>gi|348686800|gb|EGZ26614.1| hypothetical protein PHYSODRAFT_476581 [Phytophthora sojae]
Length = 1095
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 189/521 (36%), Positives = 281/521 (53%), Gaps = 79/521 (15%)
Query: 8 QVAAKIIHDNDE----RDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDE 63
Q A+ + D D+ R Q P +FG +KP+Q+EGL+W+IR + GVN +L DE
Sbjct: 128 QADAQALQDMDDARYTRITQQP-SIIKFGT---MKPYQLEGLNWMIRLHDSGVNGILADE 183
Query: 64 MGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQ 123
MGLGKTLQ+IS L+YL+ ++ GP +++ P S W+ E+ ++ P ++ +++G +++
Sbjct: 184 MGLGKTLQSISLLAYLREARGIEGPHIIIVPKSTVGNWMRELKRWCPSIKAFKFMGSKDE 243
Query: 124 RRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLK 183
R R T+ + FD L+ +Y+V ++++ L +I W Y +IDEA R+K
Sbjct: 244 RALQRETVIKQ-------------DFDALVLSYEVAIIEKAILQKIRWRYLLIDEAHRVK 290
Query: 184 NPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAV 243
N +S L V+RE F + RLL+TGTP+QNNL ELWAL++F +P VF F S F
Sbjct: 291 NENSKLSRVVRE-FKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDSEDFDSWF---- 345
Query: 244 HSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKK 297
+ ++ + L IL F+LRR K + LPP E ++ +Q++
Sbjct: 346 ---NVDEQEGQENVIKKLHTILRPFLLRRLKSDVEHS----LPPKIETKLYVGLSEMQRE 398
Query: 298 VYASILRKELPKLLALSS--------------RTANHQSLQNTA---------------S 328
Y +L ++ L A+ + NH L A
Sbjct: 399 WYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGPPYQEGPHLWENC 458
Query: 329 GKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAI 388
GK+ +L LL KL G RVL+F QMT +DIL+D++ + Y RLDGS + E+R +
Sbjct: 459 GKMTLLHKLLPKLQAQGSRVLIFCQMTSMMDILEDYMRYFGHDYCRLDGSTKGEDRDNMM 518
Query: 389 RHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQ 448
F+ A G+ F F++STRAGG+G+NL AD VI ++ DWNPQVD QA+
Sbjct: 519 EEFN-----------APGSSKFCFLLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMD 567
Query: 449 RAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
RAHRIGQ V +T+ TVEE I+ RAERKL L ++
Sbjct: 568 RAHRIGQTKIVRVFRFITDGTVEEKIVERAERKLYLDAAII 608
>gi|6319722|ref|NP_009804.1| chromatin-remodeling ATPase ISW1 [Saccharomyces cerevisiae S288c]
gi|2506238|sp|P38144.2|ISW1_YEAST RecName: Full=ISWI chromatin-remodeling complex ATPase ISW1
gi|1872131|emb|CAA85208.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285810576|tpg|DAA07361.1| TPA: chromatin-remodeling ATPase ISW1 [Saccharomyces cerevisiae
S288c]
Length = 1129
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/517 (37%), Positives = 282/517 (54%), Gaps = 69/517 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++G++WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 192 VNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVI 251
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP + G++E+R + + + FDV+
Sbjct: 252 APKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQ------------KKLLGCDFDVV 299
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 300 IASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 358
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + KI +Q L +L F+LRR
Sbjct: 359 NLHELWALLNFLLPDIFSDAQDFDDWFS---SESTEEDQDKIVKQ---LHTVLQPFLLRR 412
Query: 273 TKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL-------------PKLLALS-- 314
K VE L L ++ +QKK Y IL K+L +LL +
Sbjct: 413 IKSD-VETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQ 471
Query: 315 -SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQMTQ 356
+ NH L + A G D L +YN+ G RVL+F+QM++
Sbjct: 472 LRKCCNHPYLFDGAEPGPPYTTDEHL--VYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 529
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+++T
Sbjct: 530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYN-----------APDSKKFVFLLTT 578
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+
Sbjct: 579 RAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 638
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + + KE A D L S+I
Sbjct: 639 RATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMI 675
>gi|392301095|gb|EIW12184.1| Isw1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1069
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/517 (37%), Positives = 283/517 (54%), Gaps = 69/517 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++G++WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 132 VNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVI 191
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP + G++E+R + Q ++ FDV+
Sbjct: 192 APKSTLNNWLREINRWTPDVNAFILQGDKEERAELI---------QKKLLGCD---FDVV 239
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 240 IASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 298
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + KI +Q L +L F+LRR
Sbjct: 299 NLHELWALLNFLLPDIFSDAQDFDDWFS---SESTEEDQDKIVKQ---LHTVLQPFLLRR 352
Query: 273 TKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL-------------PKLLALS-- 314
K VE L L ++ +QKK Y IL K+L +LL +
Sbjct: 353 IKSD-VETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQ 411
Query: 315 -SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQMTQ 356
+ NH L + A G D L +YN+ G RVL+F+QM++
Sbjct: 412 LRKCCNHPYLFDGAEPGPPYTTDEHL--VYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 469
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+++T
Sbjct: 470 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYN-----------APDSKKFVFLLTT 518
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+
Sbjct: 519 RAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 578
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + + KE A D L S+I
Sbjct: 579 RATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMI 615
>gi|290878263|emb|CBK39322.1| Isw1p [Saccharomyces cerevisiae EC1118]
Length = 1069
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/517 (37%), Positives = 283/517 (54%), Gaps = 69/517 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++G++WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 132 VNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVI 191
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP + G++E+R + Q ++ FDV+
Sbjct: 192 APKSTLNNWLREINRWTPDVNAFILQGDKEERAELI---------QKKLLGCD---FDVV 239
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 240 IASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 298
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + KI +Q L +L F+LRR
Sbjct: 299 NLHELWALLNFLLPDIFSDAQDFDDWFS---SESTEEDQDKIVKQ---LHTVLQPFLLRR 352
Query: 273 TKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL-------------PKLLALS-- 314
K VE L L ++ +QKK Y IL K+L +LL +
Sbjct: 353 IKSD-VETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQ 411
Query: 315 -SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQMTQ 356
+ NH L + A G D L +YN+ G RVL+F+QM++
Sbjct: 412 LRKCCNHPYLFDGAEPGPPYTTDEHL--VYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 469
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+++T
Sbjct: 470 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYN-----------APDSKKFVFLLTT 518
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+
Sbjct: 519 RAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 578
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + + KE A D L S+I
Sbjct: 579 RATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMI 615
>gi|151946631|gb|EDN64853.1| ATPase component of a four subunit chromatin remodeling complex
[Saccharomyces cerevisiae YJM789]
gi|190408605|gb|EDV11870.1| ATPase component of a four subunit chromatin remodeling complex
[Saccharomyces cerevisiae RM11-1a]
Length = 1129
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/517 (37%), Positives = 282/517 (54%), Gaps = 69/517 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++G++WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 192 VNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVI 251
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP + G++E+R + + + FDV+
Sbjct: 252 APKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQ------------KKLLGCDFDVV 299
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 300 IASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 358
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + KI +Q L +L F+LRR
Sbjct: 359 NLHELWALLNFLLPDIFSDAQDFDDWFS---SESTEEDQDKIVKQ---LHTVLQPFLLRR 412
Query: 273 TKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL-------------PKLLALS-- 314
K VE L L ++ +QKK Y IL K+L +LL +
Sbjct: 413 IKSD-VETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQ 471
Query: 315 -SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQMTQ 356
+ NH L + A G D L +YN+ G RVL+F+QM++
Sbjct: 472 LRKCCNHPYLFDGAEPGPPYTTDEHL--VYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 529
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+++T
Sbjct: 530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYN-----------APDSKKFVFLLTT 578
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+
Sbjct: 579 RAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 638
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + + KE A D L S+I
Sbjct: 639 RATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMI 675
>gi|323310031|gb|EGA63226.1| Isw1p [Saccharomyces cerevisiae FostersO]
Length = 1069
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 194/517 (37%), Positives = 283/517 (54%), Gaps = 69/517 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++G++WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 132 VNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVI 191
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP + G++E+R + Q ++ FDV+
Sbjct: 192 APKSTLNNWLREINRWTPDVNAFILQGDKEERAELI---------QKKLLGCD---FDVV 239
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 240 IASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 298
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + KI +Q L +L F+LRR
Sbjct: 299 NLHELWALLNFLLPDIFSDAQDFDDWFS---SESTEEDQDKIVKQ---LHTVLQPFLLRR 352
Query: 273 TKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL-------------PKLLALS-- 314
K VE L L ++ +QKK Y IL K+L +LL +
Sbjct: 353 IKSD-VETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQ 411
Query: 315 -SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQMTQ 356
+ NH L + A G D L +YN+ G RVL+F+QM++
Sbjct: 412 LRKCCNHPYLFDGAEPGPPYTTDEHL--VYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 469
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+++T
Sbjct: 470 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYN-----------APDSKKFVFLLTT 518
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+
Sbjct: 519 RAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 578
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + + KE A D L S+I
Sbjct: 579 RATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMI 615
>gi|195582827|ref|XP_002081227.1| GD10909 [Drosophila simulans]
gi|194193236|gb|EDX06812.1| GD10909 [Drosophila simulans]
Length = 1001
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 201/574 (35%), Positives = 304/574 (52%), Gaps = 88/574 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+
Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E K+ P L + G+++ R R + + P +DV +
Sbjct: 185 PKSTLQNWVNEFKKWCPSLRAVCLFGDQDTRNTFIRDV------------LMPGEWDVCV 232
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L+ ++RE F +++TGTP+QNN
Sbjct: 233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLFEIMRE-FKGGDNIIITGTPLQNN 291
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F F ++++ + T L +L F+LRR
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRL 344
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K ++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 345 KAEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQ 400
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ L
Sbjct: 401 LRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRML 460
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y+Y RLDG E+R I+ F++ ++ + F+FM+STRA
Sbjct: 461 DILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAK-----------FLFMLSTRA 509
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RA
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 479 ERKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FGLH-LFDPKA--INNEESDDL- 532
E KLRL V+ G +VD + + D++ +II FG + +F K I +E+ D +
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQ---LNKDEMLNIIRFGANQVFSSKETDITDEDIDVIL 626
Query: 533 ---------RLSGLNSMVEKVIAMRHEQVSGKAG 557
+ + L+SM E + +G+AG
Sbjct: 627 ERGEAKTAEQKAALDSMGESSLRTFTMDTNGEAG 660
>gi|365766942|gb|EHN08431.1| Isw1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1129
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 193/517 (37%), Positives = 282/517 (54%), Gaps = 69/517 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++G++WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 192 VNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVI 251
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP + G++E+R + + + FDV+
Sbjct: 252 APKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQ------------KKLLGCDFDVV 299
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 300 IASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 358
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + KI +Q L +L F+LRR
Sbjct: 359 NLHELWALLNFLLPDIFSDAQDFDDWFS---SESTEEDQDKIVKQ---LHTVLQPFLLRR 412
Query: 273 TKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL-------------PKLLALS-- 314
K VE L L ++ +QKK Y IL K+L +LL +
Sbjct: 413 IKSD-VETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQ 471
Query: 315 -SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQMTQ 356
+ NH L + A G D L +YN+ G RVL+F+QM++
Sbjct: 472 LRKCCNHPYLFDGAEPGPPYTTDEHL--VYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 529
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+++T
Sbjct: 530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYN-----------APDSKKFVFLLTT 578
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+
Sbjct: 579 RAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 638
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + + KE A D L S+I
Sbjct: 639 RATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMI 675
>gi|325089685|gb|EGC42995.1| chromodomain helicase [Ajellomyces capsulatus H88]
Length = 1552
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 274/513 (53%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 469 FVQNGELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRHQQGPFI 528
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM--SNVSPLP 148
V+ PLS W +TP L + Y G E RNI +KE + N+
Sbjct: 529 VVVPLSTMPSWAETFDNWTPDLNYVVYNGN-ETSRNI-------IKEYELLIDGNIKRPK 580
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY+ VL+D FLSQI W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 581 FHVLLTTYEYVLVDAAFLSQIKWQFMAVDEAHRLKNRESQLYAKLVE-FKSPSRLLITGT 639
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QNNL EL ALM F P + Q ++S + L + +
Sbjct: 640 PVQNNLGELSALMDFLNPGLI----QIDDDMDLGCEAASV--------KLAELTKSIQPY 687
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKL------------ 310
MLRRTK K VE LPP + E++ +Q + Y +IL K L
Sbjct: 688 MLRRTKSK-VESD---LPPKSEKIIRVELSDIQLEYYKNILTKNYAALNQGGKGQKQSLL 743
Query: 311 ---------------------LALSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHR 347
L +T + ++ T+SGK+++LD LL KL GHR
Sbjct: 744 NIMMELKKASNHPFMFPNAESRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDGHR 803
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++++R Y+Y+RLDG+I A R +I HF+ + +
Sbjct: 804 VLIFSQMVRMLDILADYMDIRGYAYQRLDGTIAAGPRRLSIEHFNAPESSD--------- 854
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 855 --FAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 912
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 913 DTVEEEVLERARNKLLLEFITIQRGVTDKEATE 945
>gi|67521594|ref|XP_658859.1| hypothetical protein AN1255.2 [Aspergillus nidulans FGSC A4]
gi|40746692|gb|EAA65848.1| hypothetical protein AN1255.2 [Aspergillus nidulans FGSC A4]
gi|259488424|tpe|CBF87846.1| TPA: chromodomain helicase (Chd1), putative (AFU_orthologue;
AFUA_1G10290) [Aspergillus nidulans FGSC A4]
Length = 1517
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 200/513 (38%), Positives = 279/513 (54%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +LK QV+G++++ ++ NV+L DEMGLGKT+Q ++F+S+L+ + GPF+
Sbjct: 440 FLHNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFISWLRHVRRQQGPFV 499
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL--P 148
V+ PLS W ++P L + Y G E RN+ +KE M + +P
Sbjct: 500 VVVPLSTMPSWAETFDNWSPDLNYVVYNGN-EASRNV-------LKEYELMVDGNPRRPK 551
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL+D FLSQ W + +DEA RLKN S LY L+E F P RLL+TGT
Sbjct: 552 FNVLLTTYEYVLVDSSFLSQFNWQFMAVDEAHRLKNRDSQLYIKLQE-FNSPARLLITGT 610
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL AL+ F P + ++ D +S A E+ L +S F
Sbjct: 611 PIQNNLAELSALLDFLNPGL-------VNVDADMDLNSEA-----ASEKLAELTKAISPF 658
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELP-------------- 308
MLRRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 659 MLRRTKTK-VESD---LPPKTEKIIRVELSDVQLEYYKNILTKNYAALNEGTKGQKQSLL 714
Query: 309 ---------------------KLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
K+L S+R + T+SGK+++LD LL KL GHR
Sbjct: 715 NIMMELKKASNHPFMFPSAETKILEGSTRREDVLRALITSSGKMMLLDQLLAKLKRDGHR 774
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++E R Y+Y+RLDG+I + R AI H++ + +
Sbjct: 775 VLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIPSASRRLAIEHYNAPDSSD--------- 825
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 826 --FAFILSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSK 883
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 884 DTVEEEVIERARNKLLLEFITIQRGVTDKEASE 916
>gi|383850784|ref|XP_003700954.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Megachile rotundata]
Length = 1797
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 205/536 (38%), Positives = 298/536 (55%), Gaps = 75/536 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+W+I + +V+L DEMGLGKT+Q I FL YL + GPFL++ PLS
Sbjct: 446 LRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTHQLYGPFLLVVPLS 505
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W EM+++ P + + Y+G+ R IR + + ++ L F+ +LTTY
Sbjct: 506 TMTSWQREMSQWAPDMNFVTYLGDVTSRNVIREYEWCYSSKR--------LKFNAILTTY 557
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D+ FL + W ++DEA RLKN S+LY L E F RLL+TGTP+QN+L E
Sbjct: 558 EIVLKDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAE-FHTNHRLLITGTPLQNSLKE 616
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP+ F + +F + H ++A K ++ L L F+LRR K+
Sbjct: 617 LWALLHFIMPAKFASWEEF-----EKEHDNAAQK------GYSKLHKQLEPFILRRVKKD 665
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRK---------------------ELPKLLA- 312
+ + + + E+T LQK+ Y IL K EL K
Sbjct: 666 VEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTMTFLNIVIELKKCCNH 725
Query: 313 --LSSRTANHQSLQNT--------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
L+ T N + N SGKLV+LD LL +L +GHRVL+F+QM + LDIL
Sbjct: 726 AFLTKPTENEKKESNEDYLQQLIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRMLDILG 785
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
++L+ R + ++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG+G
Sbjct: 786 EYLQKRHFPFQRLDGSIKGELRKQALDHFNAE-----------GSQDFCFLLSTRAGGLG 834
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+++VEE I+ RA++K+
Sbjct: 835 INLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKM 894
Query: 483 RLSHNVVGD-DVVDREVKERTAVETD-------DLRSII-FGLH-LFDPKAINNEE 528
L H V+ D R V ++ T+ DL +I+ FG LF + +EE
Sbjct: 895 VLDHLVIQRMDTTGRTVLDKKNAGTNNNPFNKEDLNAILKFGAEDLFKDEEDGDEE 950
>gi|380014625|ref|XP_003691326.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Apis florea]
Length = 1795
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 204/536 (38%), Positives = 297/536 (55%), Gaps = 75/536 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+W+I + +V+L DEMGLGKT+Q I FL YL + GPFL++ PLS
Sbjct: 446 LRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTHQLYGPFLLVVPLS 505
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W EM+++ P + + Y+G+ R IR + + ++ L F+ +LTTY
Sbjct: 506 TMTSWQREMSQWAPDMNFVTYLGDVTSRNVIREYEWCYSSKR--------LKFNAILTTY 557
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D+ FL + W ++DEA RLKN S+LY L E F RLL+TGTP+QN+L E
Sbjct: 558 EIVLKDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAE-FHTNHRLLITGTPLQNSLKE 616
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP+ FG+ +F + H ++A K ++ L L F+LRR K+
Sbjct: 617 LWALLHFIMPTKFGSWEEF-----EKEHDNAAQK------GYSKLHKQLEPFILRRVKKD 665
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLA---------------------- 312
+ + + + E+T LQK+ Y IL K L
Sbjct: 666 VEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTMTFLNIVIEXKKCCNH 725
Query: 313 --LSSRTANHQSLQNT--------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
L+ T N + N SGKLV+LD LL +L +GHRVL+F+QM + LDIL
Sbjct: 726 AFLTKPTENERKDNNEDYLQQLIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRMLDILG 785
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
++L+ + + ++RLDGSI+ E R A+ HF+ A G+ F F++STRAGG+G
Sbjct: 786 EYLQKKHFPFQRLDGSIKGELRKQALDHFN-----------AEGSQDFCFLLSTRAGGLG 834
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+++VEE I+ RA++K+
Sbjct: 835 INLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKM 894
Query: 483 RLSHNVVGD-DVVDREVKERTAVETD-------DLRSII-FGLH-LFDPKAINNEE 528
L H V+ D R V ++ T+ DL +I+ FG LF + +EE
Sbjct: 895 VLDHLVIQRMDTTGRTVLDKKNAGTNNNPFNKEDLNAILKFGAEDLFKDEEDGDEE 950
>gi|323349632|gb|EGA83848.1| Isw1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1101
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 193/520 (37%), Positives = 283/520 (54%), Gaps = 75/520 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++G++WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 164 VNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVI 223
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP + G++E+R + Q ++ FDV+
Sbjct: 224 APKSTLNNWLREINRWTPDVNAFILQGDKEERAELI---------QKKLLGCD---FDVV 271
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 272 IASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 330
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + KI +Q L +L F+LRR
Sbjct: 331 NLHELWALLNFLLPDIFSDAQDFDDWFS---SESTEEDQDKIVKQ---LHTVLQPFLLRR 384
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K + L P E+ + +QKK Y IL K+L +LL +
Sbjct: 385 IKSDV----ETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNI 440
Query: 314 S---SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQ 353
+ NH L + A G D L +YN+ G RVL+F+Q
Sbjct: 441 MMQLRKCCNHPYLFDGAEPGPPYTTDEHL--VYNAAKLQVLDKLLKKLKEXGSRVLIFSQ 498
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+
Sbjct: 499 MSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYN-----------APDSKKFVFL 547
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE
Sbjct: 548 LTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEK 607
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
I+ RA +KLRL V+ + + KE A D L S+I
Sbjct: 608 ILERATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMI 647
>gi|256272897|gb|EEU07865.1| Isw1p [Saccharomyces cerevisiae JAY291]
Length = 1129
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 193/517 (37%), Positives = 282/517 (54%), Gaps = 69/517 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++G++WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 192 VNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVI 251
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP + G++E+R + + + FDV+
Sbjct: 252 APKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQ------------KKLLGCDFDVV 299
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 300 IASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 358
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + KI +Q L +L F+LRR
Sbjct: 359 NLHELWALLNFLLPDIFSDAQDFDDWFS---SESTEEDQDKIVKQ---LHTVLQPFLLRR 412
Query: 273 TKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL-------------PKLLALS-- 314
K VE L L ++ +QKK Y IL K+L +LL +
Sbjct: 413 IKSD-VETSLLPKKELNLYVGMSSVQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQ 471
Query: 315 -SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQMTQ 356
+ NH L + A G D L +YN+ G RVL+F+QM++
Sbjct: 472 LRKCCNHPYLFDGAEPGPPYTTDEHL--VYNAAKLQVLDKLLKKLKGEGSRVLIFSQMSR 529
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+++T
Sbjct: 530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYN-----------APDSKKFVFLLTT 578
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+
Sbjct: 579 RAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 638
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + + KE A D L S+I
Sbjct: 639 RATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMI 675
>gi|224001476|ref|XP_002290410.1| atpase-like protein [Thalassiosira pseudonana CCMP1335]
gi|220973832|gb|EED92162.1| atpase-like protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 873
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 193/488 (39%), Positives = 273/488 (55%), Gaps = 65/488 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
+ P+Q+EGL+W+I+ + G+N +L DEMGLGKTLQ IS L+YL+ ++ GP +V+ P S
Sbjct: 1 MHPYQLEGLNWMIKLHDHGINGILADEMGLGKTLQTISLLAYLREARGVKGPHIVIVPKS 60
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V W+ E K+ P ++ +R G +E+R+ VK FD L+ +Y
Sbjct: 61 VVGNWIKEFRKWCPSIKAIRMGGTKEERQKA-------VKNDLVPDATGKYNFDALVCSY 113
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ VL ++ L +IPW Y IIDEA R+KN +S L +R RLL+TGTP+QNNL E
Sbjct: 114 EAVLKEKSALGKIPWRYLIIDEAHRIKNENSSLSQAVR-LLNTGFRLLITGTPLQNNLHE 172
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P VFG QF F S + K G+ + L +L FM+RR K K
Sbjct: 173 LWALLNFLLPEVFGDAEQFDEWF------SMSGKEGQ-ENVIKKLHTVLRPFMMRRVK-K 224
Query: 277 LVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS--------------R 316
V CG LPP E +T +Q+ Y +LRK+ +L AL +
Sbjct: 225 DVACG---LPPKKETKLFIGLTEMQQDWYKRVLRKDAHELNALGGPSHARLQNVLMHLRK 281
Query: 317 TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L + A SGK+ +L+ LL KL G RVL+F+QMT+ LDI+
Sbjct: 282 VCNHPYLFDGAEQGPPFSDGPHLWENSGKMQLLNKLLPKLKAKGSRVLIFSQMTRVLDIM 341
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D+L L + Y R+DG+ E+R + + F+ A G+ F F++STRAGG+
Sbjct: 342 EDYLRLVGHEYCRIDGNTDGEKRDSQMEEFN-----------APGSSKFCFLLSTRAGGL 390
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL AD VI ++ DWNPQVD QA+ RAHRIGQ V ++E TVEE I+ RA++K
Sbjct: 391 GINLATADIVILFDSDWNPQVDLQAMDRAHRIGQTKPVQVFRFISEGTVEEKIIERADKK 450
Query: 482 LRLSHNVV 489
L L V+
Sbjct: 451 LFLDAAVI 458
>gi|357602534|gb|EHJ63440.1| chromodomain-helicase-DNA-binding protein 1 [Danaus plexippus]
Length = 1822
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 204/542 (37%), Positives = 286/542 (52%), Gaps = 82/542 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+WLI + +V+L DEMGLGKT+Q I FL YL SQ GPFL + PLS
Sbjct: 468 LRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPLS 527
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E A++ P + V+ Y+G+ R IR+ + ++ L F+ +LTTY
Sbjct: 528 TMTAWQREFAQWAPDINVVTYIGDVTSRDIIRQFEW-------SFASSKRLKFNAILTTY 580
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+++L D+ FL W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L E
Sbjct: 581 EILLKDRQFLRSFSWACLLVDEAHRLKNDDSLLYKALKE-FETNHRLLVTGTPLQNSLKE 639
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP F T +F +DA + L L F+LRR K+
Sbjct: 640 LWALLHFIMPYKFETWEEFEKDHEDAATKG-----------YEKLHKQLEPFILRRQKKD 688
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRKELPKL--------------LALSSRTANH 320
+ + + + E+T +QK+ Y IL K L + + NH
Sbjct: 689 VEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSALRKGVKGSINTFINIVIELKKCCNH 748
Query: 321 ------QSLQNTASGKLVVLDLLLKKLYNSG----------------HRVLLFAQMTQTL 358
+ ++ AS L D + K L SG HRVL+F+QM + L
Sbjct: 749 ALLTKPEDFESRAS--LATTDAVEKLLRGSGKLLLLDKLLCRLKETGHRVLIFSQMVRML 806
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL ++L+ R + ++RLDGSI+ E R A+ HF+ A G+ F F++STRA
Sbjct: 807 DILAEYLQRRHFPFQRLDGSIKGEIRKQALDHFN-----------AEGSQDFCFLLSTRA 855
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA
Sbjct: 856 GGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERA 915
Query: 479 ERKLRLSHNVVGD-DVVDREV-KERTAVET--------DDLRSII-FGL-HLFDPKAINN 526
+RK+ L H V+ D R V +R A T +DL +I+ FG LF N+
Sbjct: 916 KRKMVLDHLVIQRMDTTGRTVLNKRDATGTSANNPFNKEDLNAILKFGAEELFKDDDEND 975
Query: 527 EE 528
E+
Sbjct: 976 ED 977
>gi|167517477|ref|XP_001743079.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778178|gb|EDQ91793.1| predicted protein [Monosiga brevicollis MX1]
Length = 751
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 190/494 (38%), Positives = 274/494 (55%), Gaps = 67/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G + L+ +QV+G++WL + + +V+L DEMGLGKT+Q+ ++L+YL SQ+ GPFLV
Sbjct: 157 GTSLHLRDYQVDGVNWLAQAWHRETSVILADEMGLGKTIQSSTYLAYLFHSQLQYGPFLV 216
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS WV E+ ++ P++EV+ Y G R R R ++ KE L F+V
Sbjct: 217 VVPLSTMHAWVKELRRWAPQMEVVAYHGNRHNREQARVLEFDR-KE--------GLQFNV 267
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
LLTT++ V+ D LS+ W ++DEA RLKN S L+ L++ R+L+TGTP+Q
Sbjct: 268 LLTTFETVVSDVDVLSKYRWTSLLVDEAHRLKNEESALHVSLKQ-LQHDHRILITGTPLQ 326
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
N++ ELWAL+ F MP F T L HS R K L L ++LR
Sbjct: 327 NSMKELWALLSFIMPQAFPTWEVSLQDDLKREHSLGDHTRLK------RLHDDLKPYLLR 380
Query: 272 RTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS---------- 315
R K+ + + LP E ++ Q++ Y +IL + +L +
Sbjct: 381 RVKKDVEKS----LPAKVERILRVDLSSRQQQYYKTILTRNYTELRDIKKSKSSNLLNIV 436
Query: 316 ----RTANHQSLQNTA----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NH +L + SGKL++LD LL +L SGHRVL+F+QM
Sbjct: 437 MELKKCCNHTNLIDDGLDNQGGPDPLTRLLRGSGKLILLDKLLTRLKESGHRVLIFSQMV 496
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
LD+L +L LR+Y Y+RLDG+ + E+R AI HF+ A G+ F F++S
Sbjct: 497 VMLDVLAYYLALRQYQYQRLDGNTKHEQRKRAINHFN-----------AEGSTDFAFLLS 545
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL ADTVI Y+ DWNPQ D QA RAHRIGQ V LV++ TVEE I+
Sbjct: 546 TRAGGLGVNLATADTVIIYDSDWNPQNDLQAQARAHRIGQTKQVNIYRLVSKSTVEEDIL 605
Query: 476 RRAERKLRLSHNVV 489
+RA++K+ L H V+
Sbjct: 606 QRAKQKMVLDHLVI 619
>gi|239613379|gb|EEQ90366.1| chromodomain helicase [Ajellomyces dermatitidis ER-3]
Length = 1513
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 274/515 (53%), Gaps = 83/515 (16%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 465 FVQNGELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRNQQGPFI 524
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM--SNVSPLP 148
V+ PLS W +TP L + Y G E RNI +KE + NV
Sbjct: 525 VVVPLSTMPSWAETFDNWTPDLNYVVYNGN-EAARNI-------IKEYELLIDGNVRRPK 576
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY+ VL+D FLSQI W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 577 FHVLLTTYEYVLVDATFLSQIKWQFMAVDEAHRLKNRESQLYAKLFE-FKSPSRLLITGT 635
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QNNL EL ALM F P + Q ++S + L + +
Sbjct: 636 PVQNNLGELSALMDFLNPGLI----QIDEDMDLGCEAASV--------KLAELTKSIQPY 683
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRTANHQS 322
MLRRTK K VE LPP + E++ +Q + Y +IL K L S QS
Sbjct: 684 MLRRTKSK-VESD---LPPKSEKIIRVELSDIQLEYYKNILTKNYAALNQGSK--GQKQS 737
Query: 323 LQN-------------------------------------TASGKLVVLDLLLKKLYNSG 345
L N T+SGK+++LD LL KL G
Sbjct: 738 LLNIMMELKKASNHPFMFPNAESRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDG 797
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
HRVL+F+QM + LDIL D++++R Y+Y+RLDG+I A R +I HF+ +
Sbjct: 798 HRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRRLSIEHFNAPES--------- 848
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
ND F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV
Sbjct: 849 -ND-FAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLV 906
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
++ TVEE ++ RA KL L + V D+E E
Sbjct: 907 SKDTVEEEVLERARNKLLLEFITIQRGVTDKEATE 941
>gi|225559675|gb|EEH07957.1| chromodomain helicase hrp3 [Ajellomyces capsulatus G186AR]
Length = 1552
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 274/513 (53%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 469 FVQNGELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRHQQGPFI 528
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM--SNVSPLP 148
V+ PLS W +TP L + Y G E RNI +KE + N+
Sbjct: 529 VVVPLSTMPSWAETFDNWTPDLNYVVYNGN-ETSRNI-------IKEYELLIDGNIKRPK 580
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY+ VL+D FLSQI W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 581 FHVLLTTYEYVLVDAAFLSQIKWQFMAVDEAHRLKNRESQLYAKLVE-FKSPSRLLITGT 639
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QNNL EL ALM F P + Q ++S + L + +
Sbjct: 640 PVQNNLGELSALMDFLNPGLI----QIDDDMDLGCEAASV--------KLAELTKSIQPY 687
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKL------------ 310
MLRRTK K VE LPP + E++ +Q + Y +IL K L
Sbjct: 688 MLRRTKSK-VESD---LPPKSEKIIRVELSDIQLEYYKNILTKNYAALNQGGKGQKQSLL 743
Query: 311 ---------------------LALSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHR 347
L +T + ++ T+SGK+++LD LL KL GHR
Sbjct: 744 NIMMELKKASNHPFMFPNAESRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDGHR 803
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++++R Y+Y+RLDG+I A R +I HF+ + +
Sbjct: 804 VLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRRLSIEHFNAPESSD--------- 854
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 855 --FAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 912
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 913 DTVEEEVLERARNKLLLEFITIQRGVTDKEATE 945
>gi|327351880|gb|EGE80737.1| chromodomain helicase hrp3 [Ajellomyces dermatitidis ATCC 18188]
Length = 1549
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 274/515 (53%), Gaps = 83/515 (16%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 465 FVQNGELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRNQQGPFI 524
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM--SNVSPLP 148
V+ PLS W +TP L + Y G E RNI +KE + NV
Sbjct: 525 VVVPLSTMPSWAETFDNWTPDLNYVVYNGN-EAARNI-------IKEYELLIDGNVRRPK 576
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY+ VL+D FLSQI W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 577 FHVLLTTYEYVLVDATFLSQIKWQFMAVDEAHRLKNRESQLYAKLFE-FKSPSRLLITGT 635
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QNNL EL ALM F P + Q ++S + L + +
Sbjct: 636 PVQNNLGELSALMDFLNPGLI----QIDEDMDLGCEAASV--------KLAELTKSIQPY 683
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRTANHQS 322
MLRRTK K VE LPP + E++ +Q + Y +IL K L S QS
Sbjct: 684 MLRRTKSK-VESD---LPPKSEKIIRVELSDIQLEYYKNILTKNYAALNQGSK--GQKQS 737
Query: 323 LQN-------------------------------------TASGKLVVLDLLLKKLYNSG 345
L N T+SGK+++LD LL KL G
Sbjct: 738 LLNIMMELKKASNHPFMFPNAESRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDG 797
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
HRVL+F+QM + LDIL D++++R Y+Y+RLDG+I A R +I HF+ +
Sbjct: 798 HRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRRLSIEHFNAPES--------- 848
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
ND F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV
Sbjct: 849 -ND-FAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLV 906
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
++ TVEE ++ RA KL L + V D+E E
Sbjct: 907 SKDTVEEEVLERARNKLLLEFITIQRGVTDKEATE 941
>gi|429860886|gb|ELA35603.1| chromatin remodelling complex atpase chain isw1 [Colletotrichum
gloeosporioides Nara gc5]
Length = 1121
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 268/499 (53%), Gaps = 83/499 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ ++ +QV GL+WLI + G++ +L DEMGLGKTLQ ISFL YL+ GP +V+
Sbjct: 179 IQGTMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHIMDITGPHIVI 238
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI--RRTMYEHVKEQSQMSNVSPLPFD 150
P S D W E K+TP++ VL G +E+R N+ R + E FD
Sbjct: 239 VPKSTLDNWKREFEKWTPEVNVLVLQGAKEERHNLINDRLVSED--------------FD 284
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
V +T+Y++VL ++ L + W Y IIDEA R+KN S L V+R F RLL+TGTP+
Sbjct: 285 VCITSYEMVLREKAHLRKFAWEYIIIDEAHRIKNEESSLAQVIR-LFNSRNRLLITGTPL 343
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT---SLKGILSA 267
QNNL ELWAL++F +P VFG F F G+ ++Q T L +L
Sbjct: 344 QNNLHELWALLNFLLPDVFGDSEAFDQWFS-----------GQDRDQDTVVQQLHRVLRP 392
Query: 268 FMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS------ 315
F+LRR K + + L P E+ V +Q K Y IL K++ + +
Sbjct: 393 FLLRRVKSDVEKS----LLPKKEVNVYLGMSEMQIKWYQKILEKDIDAVNGANGKRESKT 448
Query: 316 ----------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+ NH L A +GK+VVLD LL ++ G RVL+
Sbjct: 449 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNAGKMVVLDKLLNRMQKQGSRVLI 508
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R+Y Y R+DG E+R AAI ++ G++ F
Sbjct: 509 FSQMSRLLDILEDYCVFRQYKYCRIDGGTAHEDRIAAIDEYN-----------KPGSEKF 557
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+F+++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VT++ +
Sbjct: 558 IFLLTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAI 617
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 618 EEKVLERAAQKLRLDQLVI 636
>gi|261194801|ref|XP_002623805.1| chromodomain helicase [Ajellomyces dermatitidis SLH14081]
gi|239588343|gb|EEQ70986.1| chromodomain helicase [Ajellomyces dermatitidis SLH14081]
Length = 1513
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 202/515 (39%), Positives = 274/515 (53%), Gaps = 83/515 (16%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 465 FVQNGELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRNQQGPFI 524
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM--SNVSPLP 148
V+ PLS W +TP L + Y G E RNI +KE + NV
Sbjct: 525 VVVPLSTMPSWAETFDNWTPDLNYVVYNGN-EAARNI-------IKEYELLIDGNVRRPK 576
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY+ VL+D FLSQI W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 577 FHVLLTTYEYVLVDATFLSQIKWQFMAVDEAHRLKNRESQLYAKLFE-FKSPSRLLITGT 635
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QNNL EL ALM F P + Q ++S + L + +
Sbjct: 636 PVQNNLGELSALMDFLNPGLI----QIDEDMDLGCEAASV--------KLAELTKSIQPY 683
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRTANHQS 322
MLRRTK K VE LPP + E++ +Q + Y +IL K L S QS
Sbjct: 684 MLRRTKSK-VESD---LPPKSEKIIRVELSDIQLEYYKNILTKNYAALNQGSK--GQKQS 737
Query: 323 LQN-------------------------------------TASGKLVVLDLLLKKLYNSG 345
L N T+SGK+++LD LL KL G
Sbjct: 738 LLNIMMELKKASNHPFMFPNAESRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDG 797
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
HRVL+F+QM + LDIL D++++R Y+Y+RLDG+I A R +I HF+ +
Sbjct: 798 HRVLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRRLSIEHFNAPES--------- 848
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
ND F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV
Sbjct: 849 -ND-FAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLV 906
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
++ TVEE ++ RA KL L + V D+E E
Sbjct: 907 SKDTVEEEVLERARNKLLLEFITIQRGVTDKEATE 941
>gi|156086702|ref|XP_001610760.1| SNF2 helicase [Babesia bovis T2Bo]
gi|154798013|gb|EDO07192.1| SNF2 helicase, putative [Babesia bovis]
Length = 894
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 192/495 (38%), Positives = 275/495 (55%), Gaps = 74/495 (14%)
Query: 38 KPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSV 97
KP+Q+EGL WL+ Y +N +L DEMGLGKT Q IS L+YLK S+ G LV+ P S
Sbjct: 87 KPYQLEGLRWLVGLYDRNMNGILADEMGLGKTFQTISLLAYLKESRGIDGLHLVIAPKST 146
Query: 98 TDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYD 157
W++E+ +F P L VL+++G +E+R M H + S+ +DV++T+Y+
Sbjct: 147 IGNWINEINRFCPDLRVLKFIGNKEERS----YMVSHELDSSK--------YDVIVTSYE 194
Query: 158 VVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSEL 217
+ LS++ + Y IIDEA R+KN S L V+R F RLL+TGTP+QNNL EL
Sbjct: 195 TCCKAKNALSKLQFHYIIIDEAHRIKNEESKLSEVVRV-FHTEYRLLITGTPLQNNLKEL 253
Query: 218 WALMHFCMPSVFGTLNQFLSTF-----KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
WAL++F P VF + +F + F KD + +I L IL FMLRR
Sbjct: 254 WALLNFLFPEVFASSEEFEAEFDLVGPKDLSQEERESRNLRI---VARLHEILRPFMLRR 310
Query: 273 TKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKL---------------- 310
+K+ ++ +PP TE+ + +QK++Y +LR+ +P L
Sbjct: 311 SKKDVLTD----MPPKTELLLMIPLSAMQKRLYKDLLRRTVPDLGAEDSHSSVVKVQLLN 366
Query: 311 LALSSRTA-NHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQM 354
LA+ R A NH L +GKL V+D LL++L + R+L+F+QM
Sbjct: 367 LAMQLRKACNHPYLFEGWEDRDADPFGEHLVENAGKLNVVDKLLRRLLKANSRILIFSQM 426
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
+ LDIL+D+ +R YSY R+DG+ EER I F+ ++ + +F++
Sbjct: 427 ARMLDILEDYCRMRGYSYFRIDGNTSGEERDDQISSFNDPNS-----------EVSIFLL 475
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V LV E+T+EE I
Sbjct: 476 STRAGGLGINLATADVVILYDSDWNPQVDLQAIDRAHRIGQSKTVHVYRLVHEYTIEEKI 535
Query: 475 MRRAERKLRLSHNVV 489
+ RA KL+L V+
Sbjct: 536 IERATIKLQLDSAVI 550
>gi|45199055|ref|NP_986084.1| AFR537Wp [Ashbya gossypii ATCC 10895]
gi|44985130|gb|AAS53908.1| AFR537Wp [Ashbya gossypii ATCC 10895]
Length = 1025
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 194/516 (37%), Positives = 290/516 (56%), Gaps = 70/516 (13%)
Query: 11 AKIIHDNDERDGQTPV-DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKT 69
A+++ D ++ T V ++ F +L+ +Q+ GL+WLI + ++ +L DEMGLGKT
Sbjct: 101 AELMQDEEQHMETTVVTESPSFVKAGKLRDYQIYGLNWLISLHENKLSGILADEMGLGKT 160
Query: 70 LQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR 129
LQ ISFL YL+F + GPF+V+ P S D W E AK+TP++ + G+RE R +
Sbjct: 161 LQTISFLGYLRFIKDIDGPFIVVVPKSTLDNWKREFAKWTPEVNTIVLHGDRETRTQL-- 218
Query: 130 TMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVL 189
++E+ + FDVL+T+Y++V+ ++ L + W Y +IDEA R+KN S L
Sbjct: 219 -----IEER-----ILTCDFDVLITSYEMVIKEKAILKKFAWQYIVIDEAHRIKNEQSTL 268
Query: 190 YNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAP 249
++R F RLL+TGTP+QNNL ELWAL++F +P VFG F F+ + A
Sbjct: 269 SQIIR-LFYSKSRLLITGTPLQNNLHELWALLNFLLPDVFGESEVFDEWFQ---QNEKAQ 324
Query: 250 KRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILR 304
+ + +Q L +L F+LRR K + + +LP + +T +Q + Y S+L
Sbjct: 325 DQEIVVQQ---LHAVLQPFLLRRVKADVEKS---LLPKIETNVYVGMTAMQLQWYRSLLE 378
Query: 305 KEL-------------PKLLALS---SRTANHQSLQNTA---------------SGKLVV 333
K++ +LL + + NH L A SGK++V
Sbjct: 379 KDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIYNSGKMIV 438
Query: 334 LDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSV 393
LD LLK+ G RVL+F+QM++ LDIL+D+ R + Y R+DG+ EER AAI F+
Sbjct: 439 LDKLLKRKKKEGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGATSHEERIAAIDEFN- 497
Query: 394 QSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRI 453
A + F+F+++TRAGG+G+NLV ADTV+ Y+ DWNPQ D QA+ RAHRI
Sbjct: 498 ----------AHDSKKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRI 547
Query: 454 GQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
GQ V LVTE+ +EE ++ RA +KLRL V+
Sbjct: 548 GQKKQVHVYRLVTENAIEEKVIERAAQKLRLDQLVI 583
>gi|170092399|ref|XP_001877421.1| chromodomain-helicase DNA-binding protein [Laccaria bicolor
S238N-H82]
gi|164647280|gb|EDR11524.1| chromodomain-helicase DNA-binding protein [Laccaria bicolor
S238N-H82]
Length = 1291
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 191/493 (38%), Positives = 266/493 (53%), Gaps = 74/493 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + G N +L DEMGLGKT+Q ++FLSYL GPFLV+ P
Sbjct: 281 GELKDFQLTGLNWLAYLWSKGENGILADEMGLGKTVQTVAFLSYLFHEMHQYGPFLVIVP 340
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W ++ A + P + V+ Y+G R IR + ++ +M +VLLT
Sbjct: 341 LSTITAWQTQFAAWAPDMNVITYIGTAAAREVIRTHEFGPSNKKLKM--------NVLLT 392
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++ L D L I W +DEA RLKN S LY LR F +LL+TGTP+QNN+
Sbjct: 393 TYELTLRDSKELGDIKWQALAVDEAHRLKNSESQLYEALRS-FSAASKLLITGTPLQNNV 451
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F N+F D H KIKE L L + MLRR K
Sbjct: 452 KELLSLMHFLMPEKFALTNEF--DLTDIDHEE------KIKE----LHEQLESLMLRRLK 499
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ ++ LP +E ++ LQ Y +IL K L+ ++
Sbjct: 500 KDVLTS----LPTKSERILRVEMSALQTHFYKNILTKNFAGLVKSANGNNNISLLNIAME 555
Query: 316 --RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L + A SGK+V+LD LL +L GHRVL+F+QM +
Sbjct: 556 LKKAANHPYLFDGAEVRTDNNEETLKGLVMNSGKMVLLDKLLARLRQDGHRVLIFSQMVR 615
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++ LR Y ++RLDG + +E R +I HF+ G+ F F++ST
Sbjct: 616 MLDILSDYMSLRGYLHQRLDGMVASEARKKSIAHFNTP-----------GSPDFAFLLST 664
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE ++
Sbjct: 665 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLE 724
Query: 477 RAERKLRLSHNVV 489
RA++K+ L + ++
Sbjct: 725 RAKKKMVLEYAII 737
>gi|224003061|ref|XP_002291202.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972978|gb|EED91309.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 1008
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/492 (37%), Positives = 281/492 (57%), Gaps = 65/492 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +Q+EGL+W+IR GVN +L DEMGLGKT+Q+IS L Y+ + GP L++ P
Sbjct: 139 GKMRQYQLEGLNWMIRLQENGVNGILADEMGLGKTMQSISILVYMLEYKQDTGPHLIIVP 198
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E+A++ PKL +++ G +++R +I + + ++ + ++V +T
Sbjct: 199 KSTLSNWMNELARWGPKLNAVKFHGTKDERLDIAENILQPGQKDEKRK------WNVCVT 252
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR-RLLMTGTPIQNN 213
TY+V +++ ++ W Y IIDEA RLKN +S ++R L R RLL+TGTP+QNN
Sbjct: 253 TYEVCNLERNVFNKFAWSYLIIDEAHRLKNEASTFSKIVRT--LETRFRLLLTGTPLQNN 310
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + +QF F + A ++ K+ + L IL FMLRR
Sbjct: 311 LHELWALLNFLVPDVFASADQFDEWFN--LDIDDADEKNKL---ISQLHKILRPFMLRRL 365
Query: 274 KQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLAL---SSRTA------ 318
K + + LPP TE ++ +QKK+Y IL +++ L SRTA
Sbjct: 366 KADVEKS----LPPKTEMILFTGMSAMQKKLYKDILMRDVDTLTGKGGSGSRTAVLNIVM 421
Query: 319 ---------------NHQSLQNTA------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+SL SGK+V+LD LL +L GHRVLLF QMT+
Sbjct: 422 QLRKCAGHPYLFPGIEDRSLPPLGEHLVENSGKMVLLDKLLIRLKERGHRVLLFTQMTRI 481
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D++ +R + Y R+DG+ E+R I ++ + + F+F++STR
Sbjct: 482 LDILEDYMHMRGFQYCRIDGNTTYEDREERIDEYNKPDS-----------EKFLFLLSTR 530
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI ++ DWNPQ D QA RAHRIGQ V +VTE T+E+ ++ R
Sbjct: 531 AGGLGINLQTADVVILFDSDWNPQADLQAQDRAHRIGQKRTVQVFRIVTEDTIEQKVVER 590
Query: 478 AERKLRLSHNVV 489
A++KL+L VV
Sbjct: 591 AQQKLKLDAMVV 602
>gi|50293735|ref|XP_449279.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528592|emb|CAG62253.1| unnamed protein product [Candida glabrata]
Length = 1476
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 312/559 (55%), Gaps = 84/559 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++F+S+L F++ GP LV+ P
Sbjct: 389 GELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHLVVVP 448
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR--TMYEHVKEQSQMSNVSPLPFDVL 152
LS W+ K+ P ++V+ Y+G ++ R+I R Y + K + + + F+VL
Sbjct: 449 LSTMPAWIETFEKWAPDIDVICYMGN-QKSRDIEREYEFYSNPKGKGKKQ----IKFNVL 503
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TTY+ +L D+ L I W + +DEA RLKN S LY L F + RLL+TGTP+QN
Sbjct: 504 MTTYEYILKDRAELGSIKWQFLAVDEAHRLKNAESSLYESLNS-FKVANRLLITGTPLQN 562
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT-SLKGILSAFMLR 271
N+ EL AL++F MP F T++Q + F++ + + +EQ+ L L F+LR
Sbjct: 563 NIKELAALVNFLMPGRF-TIDQEID-FEN---------QDEEQEQYIRDLHKRLQPFILR 611
Query: 272 RTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS---------- 315
R K+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 612 RLKKDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGRFSMLNIM 667
Query: 316 ----RTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGH 346
+ +NH L ++A SGK+V+LD LL +L GH
Sbjct: 668 NTLMKASNHPYLFDSAEEKVLEKFGAGNMSRENILRGLIMSSGKMVLLDKLLTRLKKDGH 727
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDIL D+L ++ +++RLDG++ + +R AI HF+ A G
Sbjct: 728 RVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSNQRRIAIDHFN-----------APG 776
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+D FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ LV+
Sbjct: 777 SDDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVS 836
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVD-REVKERTAVETDDLRSII-FGL-HLFDPKA 523
+ TVEE ++ RA +K+ L + ++ V D + ++T +L I+ FG ++F K
Sbjct: 837 KDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKTEPSAGELSEILKFGAGNMFAAKD 896
Query: 524 INNEESDDLRLSGLNSMVE 542
N ++ +DL L + S E
Sbjct: 897 -NQKKLEDLNLDDVLSHAE 914
>gi|240279419|gb|EER42924.1| chromodomain helicase hrp3 [Ajellomyces capsulatus H143]
Length = 1540
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 274/513 (53%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 457 FVQNGELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRHQQGPFI 516
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM--SNVSPLP 148
V+ PLS W +TP L + Y G E RNI +KE + N+
Sbjct: 517 VVVPLSTMPSWAETFDNWTPDLNYVVYNGN-ETSRNI-------IKEYELLIDGNIKRPK 568
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY+ VL+D FLSQI W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 569 FHVLLTTYEYVLVDAAFLSQIKWQFMAVDEAHRLKNRESQLYAKLVE-FKSPSRLLITGT 627
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QNNL EL ALM F P + Q ++S + L + +
Sbjct: 628 PVQNNLGELSALMDFLNPGLI----QIDDDMDLGCEAASV--------KLAELTKSIQPY 675
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKL------------ 310
MLRRTK K VE LPP + E++ +Q + Y +IL K L
Sbjct: 676 MLRRTKSK-VESD---LPPKSEKIIRVELSDIQLEYYKNILTKNYAALNQGGKGQKQSLL 731
Query: 311 ---------------------LALSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHR 347
L +T + ++ T+SGK+++LD LL KL GHR
Sbjct: 732 NIMMELKKASNHPFMFPNAESRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDGHR 791
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++++R Y+Y+RLDG+I A R +I HF+ + +
Sbjct: 792 VLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRRLSIEHFNAPESSD--------- 842
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 843 --FAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 900
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 901 DTVEEEVLERARNKLLLEFITIQRGVTDKEATE 933
>gi|154280933|ref|XP_001541279.1| hypothetical protein HCAG_03376 [Ajellomyces capsulatus NAm1]
gi|150411458|gb|EDN06846.1| hypothetical protein HCAG_03376 [Ajellomyces capsulatus NAm1]
Length = 1552
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 196/513 (38%), Positives = 274/513 (53%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 469 FVQNGELKEFQVKGVNFMAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRHQQGPFI 528
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM--SNVSPLP 148
V+ PLS W +TP L + Y G E RNI +KE + N+
Sbjct: 529 VVVPLSTMPSWAETFDNWTPDLNYVVYNGN-ETSRNI-------IKEYELLIDGNIKRPK 580
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY+ VL+D FLSQI W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 581 FHVLLTTYEYVLVDAAFLSQIKWQFMAVDEAHRLKNRESQLYAKLVE-FKSPSRLLITGT 639
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QNNL EL ALM F P + Q ++S + L + +
Sbjct: 640 PVQNNLGELSALMDFLNPGLI----QIDDDMDLGCEAASV--------KLAELTKSIQPY 687
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKL------------ 310
MLRRTK K VE LPP + E++ +Q + Y +IL K L
Sbjct: 688 MLRRTKSK-VESD---LPPKSEKIIRVELSDIQLEYYKNILTKNYAALNQGGKGQKQSLL 743
Query: 311 ---------------------LALSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHR 347
L +T + ++ T+SGK+++LD LL KL GHR
Sbjct: 744 NIMMELKKASNHPFMFPNAESRILEGKTGREEMMRALITSSGKMMLLDQLLAKLKKDGHR 803
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++++R Y+Y+RLDG+I A R +I HF+ + +
Sbjct: 804 VLIFSQMVRMLDILADYMDVRGYAYQRLDGTIAAGPRRLSIEHFNAPESSD--------- 854
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 855 --FAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 912
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 913 DTVEEEVLERARNKLLLEFITIQRGVTDKEATE 945
>gi|308493124|ref|XP_003108752.1| hypothetical protein CRE_11128 [Caenorhabditis remanei]
gi|308248492|gb|EFO92444.1| hypothetical protein CRE_11128 [Caenorhabditis remanei]
Length = 1496
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 194/525 (36%), Positives = 290/525 (55%), Gaps = 80/525 (15%)
Query: 8 QVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLG 67
+V K++ ++ G P T +LKP+Q++GL W++ Y +N +L DEMGLG
Sbjct: 514 KVKEKVVKQHETMGGGDP--------TLQLKPYQLKGLEWMVSLYNNNLNGILADEMGLG 565
Query: 68 KTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI 127
KT+Q IS L+YL + + GP+LV+ PLS W SE AK+ P ++ + Y G ++ RR +
Sbjct: 566 KTIQTISLLTYLMEVKQNNGPYLVIVPLSTLSNWQSEFAKWAPNVKSVIYKGTKDARRRV 625
Query: 128 RRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSS 187
++Q+ V F+VL+TTY+ V+ ++ L +I W Y IIDE RLKN +S
Sbjct: 626 ----------EAQIKRVD---FNVLMTTYEYVIKEKALLGKIRWKYMIIDEGHRLKNHNS 672
Query: 188 VLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSS 247
L ++L F RLL+TGTP+QN L ELWAL++F +PS+F + + F F +A +++
Sbjct: 673 KLTSMLNGFFKAQHRLLLTGTPLQNKLPELWALLNFLLPSIFSSCDTFEQWF-NAPFATT 731
Query: 248 APKRGKIKEQ----FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKK 297
K +E+ L +L F+LRR K K VE LP TE ++ LQK
Sbjct: 732 GEKVELNQEETMLIIRRLHKVLRPFLLRRLK-KEVESE---LPDKTEYVIKCDMSALQKV 787
Query: 298 VYASILR------------KELPKLLALSSRTANH----QSLQNTA-------------- 327
+Y + + + L + + NH Q+++++
Sbjct: 788 IYRHMKKGLLLDAKMSSGARSLSNTIVHLRKLCNHPFLFQNIEDSCRAHWKVNEVSGKDL 847
Query: 328 ---SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEER 384
+GKL +LD +L KL +GHRVL+F QMT+ +DI +DFL R Y+Y RLDGS + +ER
Sbjct: 848 MRVAGKLELLDRILPKLKATGHRVLMFFQMTKMMDIFEDFLHFRNYTYLRLDGSTKPDER 907
Query: 385 FAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 444
+ LY+ A ++ F+FM+STRAGG+GLNL ADTVI ++ DWNP D
Sbjct: 908 GDLL----------SLYN-APDSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDM 956
Query: 445 QALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
QA RAHRIGQ V + L+T ++VEE ++ A KL + V+
Sbjct: 957 QAQDRAHRIGQKKEVRVLRLITANSVEEKMLAVARYKLNVDEKVI 1001
>gi|440297057|gb|ELP89787.1| CHD3-type chromatin-remodeling factor PICKLE, putative [Entamoeba
invadens IP1]
Length = 1343
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 194/514 (37%), Positives = 282/514 (54%), Gaps = 72/514 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+ +Q+EG++WL + VNV+L DEMGLGKT+Q I+FL +L GP LV+ PL
Sbjct: 379 KLRDYQIEGVNWLTYAFSKNVNVILADEMGLGKTIQTITFLRHLYDKCNYVGPHLVVVPL 438
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP-FDVLLT 154
S + W E AK+ P++ + Y G+ E R IR+T +M + S P F+VLLT
Sbjct: 439 STINNWAKEFAKWAPRMNCIVYTGDGESRAIIRKT---------EMESTSKKPKFNVLLT 489
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
T+++V+ DQG L+ W Y +DEA RLKN LY L + +LL+TGTP+QN L
Sbjct: 490 TFELVIKDQGLLNLYHWGYLAVDEAHRLKNAEGQLYEALL-NLHTECKLLITGTPLQNTL 548
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELW+L+HF P F F T H +A E+ L ++LRR K
Sbjct: 549 KELWSLLHFLHPEQFPNFEDFEKT-----HKVNAA------EELQKFHSELKPYILRRMK 597
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKE--------------LPKLLALS 314
+++ + LPP E ++ LQK+ Y I+ K L ++
Sbjct: 598 KEVEKS----LPPKKERILRVGLSGLQKQYYRWIITKNESALKKAVKQQKMSLMNIMIEL 653
Query: 315 SRTANHQSLQNTA-----------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQD 363
+ NH L N + GK+V+LD LL +L GHRVL+F+QM + LDIL +
Sbjct: 654 KKLCNHPLLINQSISYDEQGLIESCGKMVLLDKLLVELKKDGHRVLIFSQMVRMLDILAE 713
Query: 364 FLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGL 423
+++ R +SY+RLDGS+ E R A+ F+ + + + F F++STRAGG+G+
Sbjct: 714 YMKKRGFSYQRLDGSMGKEPRQRAMEQFNAKDSRD-----------FCFLLSTRAGGLGI 762
Query: 424 NLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLR 483
NL +ADTVI Y+ DWNPQ D QA R HRIGQ V LVTE +VEE I+ A++K+
Sbjct: 763 NLTSADTVIIYDSDWNPQNDLQAQARCHRIGQEKMVNIYRLVTEGSVEEKILMSAKKKMV 822
Query: 484 LSHNVVGDDVVDREVKE-RTAVETDDLRSII-FG 515
L H V+ ++++ K + + E D++ II FG
Sbjct: 823 LDHLVI--QTMEKKKKNGKESFEKDEIDRIIKFG 854
>gi|344305047|gb|EGW35279.1| hypothetical protein SPAPADRAFT_64429 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1000
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 180/500 (36%), Positives = 268/500 (53%), Gaps = 69/500 (13%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D+ + +L+P+Q++GL+WLI Y ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 122 TDSPGYIHNGKLRPYQIQGLNWLISLYENNLSGILADEMGLGKTLQTISFLGYLRYIRNI 181
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP +V+ P S D W E ++ P ++VL G++E+R + R NV
Sbjct: 182 NGPHIVIAPKSTLDNWRREFNRWIPDIKVLVVQGDKEERAELIR------------DNVL 229
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
FDV++ +Y++V+ ++ + W Y IIDEA R+KN S+L ++R F RLL+
Sbjct: 230 TCNFDVIIASYEIVIREKSTFKKFDWEYIIIDEAHRIKNEESLLSQIIR-MFHSKNRLLI 288
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGIL 265
TGTP+QNNL ELWAL++F +P VF + F D P + + L +L
Sbjct: 289 TGTPLQNNLRELWALLNFILPDVFADNDSF-----DEWFHQDNPNEDEDNKVIVQLHKVL 343
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL------------ 307
F+LRR K + + L P E+ V +QK Y IL K++
Sbjct: 344 KPFLLRRIKADVEKS----LLPKKELNVYVKMSDMQKNWYQKILEKDIDAVNGANKKESK 399
Query: 308 PKLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVL 349
+LL + + NH L A S K+++LD LLKK G RVL
Sbjct: 400 TRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSEKMIILDKLLKKFKQEGSRVL 459
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM++ LDIL+D+ R++ Y R+DGS +R AI ++ + +
Sbjct: 460 IFSQMSRMLDILEDYCYFREFEYCRIDGSTEHSDRINAIDEYNKPDS-----------EK 508
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF+++TRAGG+G+NL AD VI ++ DWNPQ D QA+ RAHRIGQ V +TE+
Sbjct: 509 FVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVKVFRFITENA 568
Query: 470 VEEVIMRRAERKLRLSHNVV 489
+EE ++ RA +KLRL V+
Sbjct: 569 IEEKVLERATQKLRLDQLVI 588
>gi|403414793|emb|CCM01493.1| predicted protein [Fibroporia radiculosa]
Length = 1441
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 196/493 (39%), Positives = 266/493 (53%), Gaps = 74/493 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK Q+ GL+WL + G N +L DEMGLGKT+Q +SFLSYL GPFLV+ P
Sbjct: 380 GQLKDFQLTGLNWLAYLWSKGENGILADEMGLGKTVQTVSFLSYLFHEMRQYGPFLVIVP 439
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W S+ A + P L V+ Y+G R IR YE + L +VLLT
Sbjct: 440 LSTITAWQSQFATWAPDLNVITYIGTAAAREVIR--GYEFGPSNKK------LRMNVLLT 491
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++ L D L I W +DEA RLKN S LY LR F +LL+TGTP+QNN+
Sbjct: 492 TYEITLRDSKELGDIKWQVLSVDEAHRLKNSESQLYEALRS-FSAASKLLITGTPLQNNV 550
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F N+F D H KIKE L L + MLRR K
Sbjct: 551 KELLSLMHFLMPEKFHLSNEF--DLTDVDHEE------KIKE----LHKQLESLMLRRLK 598
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ ++ LP +E ++ LQ Y +IL K L+ ++
Sbjct: 599 RDVL----TELPTKSERILRVEMSGLQTHFYKNILTKNFQGLVKSANGNNNISLLNIAME 654
Query: 316 --RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L + A SGK+V+LD LL +L GHRVL+F+QM +
Sbjct: 655 LKKAANHPYLFDGAETKTDNEEETLKGLVMSSGKMVLLDKLLARLRQDGHRVLIFSQMVR 714
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++ +R Y ++RLDG I +E R AI HF+ + G+ F F++ST
Sbjct: 715 MLDILTDYMVMRGYQHQRLDGMISSELRKKAIAHFN-----------SPGSTDFAFLLST 763
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE ++
Sbjct: 764 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLE 823
Query: 477 RAERKLRLSHNVV 489
RA++K+ L + ++
Sbjct: 824 RAKKKMVLEYAII 836
>gi|452982807|gb|EME82565.1| hypothetical protein MYCFIDRAFT_137581 [Pseudocercospora fijiensis
CIRAD86]
Length = 1079
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 184/492 (37%), Positives = 273/492 (55%), Gaps = 73/492 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +QV GL+WLI + G++ +L DEMGLGKTLQ ISF+ YL+F Q GP LV P
Sbjct: 154 GEMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTISFIGYLRFWQGITGPHLVAVP 213
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S D W E AK+ P++ VL G +E+R +E + ++ + FDV +T
Sbjct: 214 KSTLDNWKREFAKWIPEINVLVLQGAKEER-------HELINDR-----LVDEKFDVCIT 261
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y+++L ++ L + W Y IIDEA R+KN S L ++R F RLL+TGTP+QNNL
Sbjct: 262 SYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQIIR-IFNSRNRLLITGTPLQNNL 320
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VFG F S F ++ A + +++ L +L F+LRR K
Sbjct: 321 HELWALLNFLLPDVFGDSEAFDSWF----NNQDADQDTVVQQ----LHRVLRPFLLRRVK 372
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS------------- 315
+ + L P E+ + +Q K Y SIL K++ + +
Sbjct: 373 SDVEKS----LLPKKEMNLYVGMSEMQIKWYKSILEKDIDAVNGAAGNKESKTRLLNIVM 428
Query: 316 ---RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A S K+V+LD LL ++ G RVL+F+QM++
Sbjct: 429 QLRKCCNHPYLFDGAEPGPPYTTDEHLVFNSAKMVMLDKLLNRMQAQGSRVLIFSQMSRV 488
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D+ +R Y Y R+DGS E+R AAI ++ + G++ F+F+++TR
Sbjct: 489 LDILEDYSVMRGYKYCRIDGSTAHEDRIAAIDDYNKE-----------GSEKFLFLLTTR 537
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD V+ ++ DWNPQ D QA+ RAHRIGQ V +TE +EE ++ R
Sbjct: 538 AGGLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVHVFRFITEKAIEEKVLER 597
Query: 478 AERKLRLSHNVV 489
A +KLRL V+
Sbjct: 598 AAQKLRLDQLVI 609
>gi|341899885|gb|EGT55820.1| hypothetical protein CAEBREN_20391 [Caenorhabditis brenneri]
Length = 1499
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 191/497 (38%), Positives = 279/497 (56%), Gaps = 72/497 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+LKP+Q++GL W++ Y +N +L DEMGLGKT+Q IS L+YL + + GP+LV+ PL
Sbjct: 533 QLKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLLTYLMEVKQNNGPYLVIVPL 592
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W SE AK+ P + + Y G ++ RR + + Q+ V F+VL+TT
Sbjct: 593 STLSNWQSEFAKWAPNVRTVTYKGTKDARRRV----------EGQIKRVD---FNVLMTT 639
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+ V+ ++ L +I W Y IIDE RLKN +S L ++L F RLL+TGTP+QN L
Sbjct: 640 YEYVIKEKTLLGKIRWKYMIIDEGHRLKNHNSKLTSMLNGFFHAQHRLLLTGTPLQNKLP 699
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ----FTSLKGILSAFMLR 271
ELWAL++F +PS+F + + F F +A +++ K +E+ L +L F+LR
Sbjct: 700 ELWALLNFLLPSIFSSCDTFEQWF-NAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLR 758
Query: 272 RTKQKLVECGHLMLPPLTE------ITVLQKKVY------------ASILRKELPKLLAL 313
R K K VE LP TE ++ LQK +Y AS + L +
Sbjct: 759 RLK-KEVESE---LPDKTEYVIKCDMSALQKVIYRHMKKGLLLDARASSGARSLSNTIVH 814
Query: 314 SSRTANH----QSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
+ NH Q+++++ +GKL +LD +L KL +GHRVL+F
Sbjct: 815 LRKLCNHPFLFQNIEDSCRAHWKVNEVNGKELMRVAGKLELLDRILPKLKATGHRVLMFF 874
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QMT+ +DI +DFL R+Y+Y RLDGS + +ER + LY+ A ++ F+F
Sbjct: 875 QMTKMMDIFEDFLHFRQYTYLRLDGSTKPDERGDLLS----------LYN-APDSEYFLF 923
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
M+STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ V + L+T ++VEE
Sbjct: 924 MLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEE 983
Query: 473 VIMRRAERKLRLSHNVV 489
++ A KL + V+
Sbjct: 984 KMLAVARYKLNVDEKVI 1000
>gi|341877976|gb|EGT33911.1| hypothetical protein CAEBREN_09020 [Caenorhabditis brenneri]
Length = 1499
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 191/497 (38%), Positives = 279/497 (56%), Gaps = 72/497 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+LKP+Q++GL W++ Y +N +L DEMGLGKT+Q IS L+YL + + GP+LV+ PL
Sbjct: 533 QLKPYQLKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLLTYLMEVKQNNGPYLVIVPL 592
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W SE AK+ P + + Y G ++ RR + + Q+ V F+VL+TT
Sbjct: 593 STLSNWQSEFAKWAPNVRTVTYKGTKDARRRV----------EGQIKRVD---FNVLMTT 639
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+ V+ ++ L +I W Y IIDE RLKN +S L ++L F RLL+TGTP+QN L
Sbjct: 640 YEYVIKEKTLLGKIRWKYMIIDEGHRLKNHNSKLTSMLNGFFHAQHRLLLTGTPLQNKLP 699
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ----FTSLKGILSAFMLR 271
ELWAL++F +PS+F + + F F +A +++ K +E+ L +L F+LR
Sbjct: 700 ELWALLNFLLPSIFSSCDTFEQWF-NAPFATTGEKVELNQEETMLIIRRLHKVLRPFLLR 758
Query: 272 RTKQKLVECGHLMLPPLTE------ITVLQKKVY------------ASILRKELPKLLAL 313
R K K VE LP TE ++ LQK +Y AS + L +
Sbjct: 759 RLK-KEVESE---LPDKTEYVIKCDMSALQKVIYRHMKKGLLLDARASSGARSLSNTIVH 814
Query: 314 SSRTANH----QSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
+ NH Q+++++ +GKL +LD +L KL +GHRVL+F
Sbjct: 815 LRKLCNHPFLFQNIEDSCRAHWKVNEVNGKELMRVAGKLELLDRILPKLKATGHRVLMFF 874
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QMT+ +DI +DFL R+Y+Y RLDGS + +ER + LY+ A ++ F+F
Sbjct: 875 QMTKMMDIFEDFLHFRQYTYLRLDGSTKPDERGDLLS----------LYN-APDSEYFLF 923
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
M+STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ V + L+T ++VEE
Sbjct: 924 MLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEE 983
Query: 473 VIMRRAERKLRLSHNVV 489
++ A KL + V+
Sbjct: 984 KMLAVARYKLNVDEKVI 1000
>gi|374109315|gb|AEY98221.1| FAFR537Wp [Ashbya gossypii FDAG1]
Length = 1025
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 194/516 (37%), Positives = 290/516 (56%), Gaps = 70/516 (13%)
Query: 11 AKIIHDNDERDGQTPV-DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKT 69
A+++ D ++ T V ++ F +L+ +Q+ GL+WLI + ++ +L DEMGLGKT
Sbjct: 101 AELMQDEEQHMETTVVTESPSFVKAGKLRDYQIYGLNWLISLHENKLSGILADEMGLGKT 160
Query: 70 LQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR 129
LQ ISFL YL+F + GPF+V+ P S D W E AK+TP++ + G+RE R +
Sbjct: 161 LQTISFLGYLRFIKDIDGPFIVVVPKSTLDNWKREFAKWTPEVNTIVLHGDRETRTQL-- 218
Query: 130 TMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVL 189
++E+ + FDVL+T+Y++V+ ++ L + W Y +IDEA R+KN S L
Sbjct: 219 -----IEER-----ILTCDFDVLITSYEMVIKEKAILKKFAWQYIVIDEAHRIKNEQSTL 268
Query: 190 YNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAP 249
++R F RLL+TGTP+QNNL ELWAL++F +P VFG F F+ + A
Sbjct: 269 SQIIR-LFYSKSRLLITGTPLQNNLHELWALLNFLLPDVFGESEVFDEWFQ---QNEKAQ 324
Query: 250 KRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILR 304
+ + +Q L +L F+LRR K + + +LP + +T +Q + Y S+L
Sbjct: 325 DQEIVVQQ---LHAVLQPFLLRRVKADVEKS---LLPKIETNVYVGMTAMQLQWYRSLLE 378
Query: 305 KEL-------------PKLLALS---SRTANHQSLQNTA---------------SGKLVV 333
K++ +LL + + NH L A SGK++V
Sbjct: 379 KDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIYNSGKMIV 438
Query: 334 LDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSV 393
LD LLK+ G RVL+F+QM++ LDIL+D+ R + Y R+DG+ EER AAI F+
Sbjct: 439 LDKLLKRKKKEGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGATSHEERIAAIDEFN- 497
Query: 394 QSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRI 453
A + F+F+++TRAGG+G+NLV ADTV+ Y+ DWNPQ D QA+ RAHRI
Sbjct: 498 ----------AHDSKKFIFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRI 547
Query: 454 GQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
GQ V LVTE+ +EE ++ RA +KLRL V+
Sbjct: 548 GQKKQVHVYRLVTENAIEEKVIERAAQKLRLDQLVI 583
>gi|328868808|gb|EGG17186.1| chromo domain-containing protein [Dictyostelium fasciculatum]
Length = 1716
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 194/490 (39%), Positives = 273/490 (55%), Gaps = 66/490 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q++GL+WLI + NV+L DEMGLGKT+Q ISF+SYL Q GP+LV+ P
Sbjct: 600 GKLRDYQMDGLNWLIHSWFNNTNVILADEMGLGKTIQTISFISYLYNVQQMSGPYLVVVP 659
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS + W E AK+ P + ++ Y G R I+ YE + Q L F+VLLT
Sbjct: 660 LSTIENWQREFAKWAPSMNLIVYTGSAGSRDIIKE--YEFYQYQY---GKKKLNFNVLLT 714
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TYD +L D+ L I W Y +DEA RLKN S+L+ VL+ F RLL+TGTP+QN++
Sbjct: 715 TYDFILKDKQVLGSIKWEYLAVDEAHRLKNNESMLHEVLK-FFKTGNRLLVTGTPLQNSM 773
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELW L++F MP+ F +L F + D K K+Q L L +LRR K
Sbjct: 774 KELWNLLNFLMPNKFHSLKDFQDQWSDL----------KEKDQIAELHNELKPHLLRRIK 823
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKL--------------LALS 314
+++ + LP TE ++ LQKK Y IL+K +L +
Sbjct: 824 KEVEKS----LPAKTERILRVDLSPLQKKYYRLILKKNFQELNKGVKGEKTSLLNIVVEL 879
Query: 315 SRTANHQSLQNTASGKLV--VLDLLLK-------------KLYNSGHRVLLFAQMTQTLD 359
+T NH L +A + LD L+K +L +GHRVL+F+QM + LD
Sbjct: 880 KKTCNHPYLFESAENENYNDSLDALIKGSGKLILLDKLLIRLKETGHRVLIFSQMVRMLD 939
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL +L+ R + ++RLDGS+ E+R A+ F+ A G+ F F++STRAG
Sbjct: 940 ILARYLKHRGFLFQRLDGSMSREKRSQAMDRFN-----------AEGSPDFCFLLSTRAG 988
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL ADTV+ ++ D+NPQ D QA RAHRIGQ N V LVT+ TVEE I+ RA+
Sbjct: 989 GLGINLSTADTVVIFDSDYNPQNDLQAEARAHRIGQKNAVNIYRLVTKKTVEEDILERAK 1048
Query: 480 RKLRLSHNVV 489
+K+ L H V+
Sbjct: 1049 QKMVLDHLVI 1058
>gi|452848207|gb|EME50139.1| hypothetical protein DOTSEDRAFT_68860 [Dothistroma septosporum
NZE10]
Length = 1602
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 272/507 (53%), Gaps = 75/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ GL++L + G NV+L DEMGLGKT+Q +F+++L+ + GPF+V+ P
Sbjct: 449 GELREFQIHGLNFLAHHWCKGNNVILADEMGLGKTVQTCAFINWLRHDRRQQGPFIVVVP 508
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +TP + + Y G R+ IR YE + + N + F+VLLT
Sbjct: 509 LSTMPAWADTFNNWTPDVNYVVYNGNEAARKIIRE--YELLVD----GNPKKVKFNVLLT 562
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D FLSQ+ W + +DEA RLKN S LY L + F P RLL+TGTP+QN L
Sbjct: 563 TYEYILADATFLSQLKWQFMAVDEAHRLKNRESQLYAKLLD-FNAPSRLLITGTPMQNTL 621
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL ALM F MP T + H+S + L +S +M+RRTK
Sbjct: 622 GELSALMDFLMPGKIHVEENIDLT---SEHAS---------RKLAELTDAISPYMIRRTK 669
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
QK+ LPP T E++ +Q + Y +IL + L A +
Sbjct: 670 QKVEND----LPPKTEKIIRVELSDVQLEYYKNILTRNYAALNAGAKAGKTSLLNIMMEL 725
Query: 315 SRTANHQSL-QN--------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ +NH + QN T+SGKL++LD LL K+ GHRVL+F+Q
Sbjct: 726 KKASNHPFMFQNAEERLLAGSESREDLLKAMITSSGKLMLLDQLLTKMKKDGHRVLIFSQ 785
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M + LDIL D+L LR + ++RLDG+I A R AI HF+ + + F F+
Sbjct: 786 MVKMLDILGDYLALRGHQFQRLDGTIAAGPRRMAIDHFNAPDSQD-----------FTFL 834
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V V++ TVEE
Sbjct: 835 LSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQKKPVTIYRFVSKDTVEEE 894
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKE 500
++ RA KL L + V D++ ++
Sbjct: 895 VLERARNKLMLEFITIQRGVTDKDARD 921
>gi|301785221|ref|XP_002928025.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like,
partial [Ailuropoda melanoleuca]
Length = 1114
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 193/494 (39%), Positives = 275/494 (55%), Gaps = 81/494 (16%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ NIR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEI-------------NIRE--YEWIHSQTKR-----LKFNA 578
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 579 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSHHRLLITGTPLQ 637
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 638 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 685
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 686 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 744
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 745 LKKCCNHCYLIKPPEENERENGQEVLLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 804
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 805 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 853
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 854 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 913
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 914 ERAKKKMVLDHLVI 927
>gi|361126616|gb|EHK98608.1| putative Chromodomain helicase hrp3 [Glarea lozoyensis 74030]
Length = 1268
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 207/557 (37%), Positives = 293/557 (52%), Gaps = 91/557 (16%)
Query: 20 RDGQTPV-DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSY 78
R P+ + + + +L+ Q+ GL++L + NV+L DEMGLGKT+Q ++F ++
Sbjct: 405 RSAHVPIREQPSYIMNGQLRAFQMTGLNFLAYNWTKNKNVILADEMGLGKTVQTVAFTNW 464
Query: 79 LKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ 138
L+ + GPFL++ PL+ W + P L + Y G+ R IR YE + +
Sbjct: 465 LRNDRNQQGPFLIVVPLTTIPAWADTFDNWAPDLNYVIYNGKEAARATIRE--YELLID- 521
Query: 139 SQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFL 198
N F+VLLT+Y+ +L D FL+QI W + +DEA RLKN S LY L + F
Sbjct: 522 ---GNPKRPKFNVLLTSYEYILADSSFLAQIKWQFMAVDEAHRLKNRESQLYVKLLD-FK 577
Query: 199 MPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF 258
P RLL+TGTP+QN L EL ALM F MP L +D S+ A E+
Sbjct: 578 APSRLLITGTPVQNTLGELSALMDFLMPGE-------LQIEEDMDLSAEAA-----GEKI 625
Query: 259 TSLKGILSAFMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASIL--------- 303
+L + ++LRRTKQK+ LPP T E++ +Q + Y +IL
Sbjct: 626 AALTKDIEPYILRRTKQKVEND----LPPKTEKIIRVELSDVQLEYYKNILTRNYKALNE 681
Query: 304 -----RKELPKLLALSSRTANHQSLQNTA---------------------SGKLVVLDLL 337
++ L ++ + +NH + A SGK+++LD L
Sbjct: 682 GSKGQKQSLLNIMMELKKASNHPYMFPNAEDKIIKGSTRRDDQLKGLIASSGKMMLLDRL 741
Query: 338 LKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAI 397
L KL GHRVL+F+QM + LDIL D+L+LR Y ++RLDG+I A R AI HF+ +
Sbjct: 742 LAKLKRDGHRVLIFSQMVKMLDILGDYLQLRSYQFQRLDGTIAAAPRRLAIDHFNAE--- 798
Query: 398 ERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMN 457
G ND F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ
Sbjct: 799 -------GSND-FCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKK 850
Query: 458 HVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIF--G 515
V LV++ TVEE I+ RA KL L + V D+E KE LR F G
Sbjct: 851 PVSIYRLVSKETVEEEILERARNKLMLEFVTIQRGVTDKERKE--------LREKAFKKG 902
Query: 516 LHLFDPKAINNEESDDL 532
+ + DPK+ SDD+
Sbjct: 903 VMVDDPKS-----SDDI 914
>gi|321469421|gb|EFX80401.1| hypothetical protein DAPPUDRAFT_318579 [Daphnia pulex]
Length = 1037
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 203/583 (34%), Positives = 306/583 (52%), Gaps = 85/583 (14%)
Query: 24 TPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFS 82
T D + F + E++ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K
Sbjct: 122 TRFDTSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHY 181
Query: 83 QMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMS 142
+ GP +V+ P S W++E K+ P L + G++E R NI R
Sbjct: 182 RNINGPHMVIVPKSTLANWMNEFKKWCPTLRAVCLTGDQETRANIVR------------D 229
Query: 143 NVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRR 202
+ P +D +T+Y++V+ ++ + W Y +IDEA R+KN S L ++RE F R
Sbjct: 230 EIMPGEWDACVTSYEIVMKERAVFKKFNWRYMVIDEAHRIKNEKSKLSEIVRE-FKTSNR 288
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFK--DAVHSSSAPKRGKIKEQFTS 260
LL+TGTP+QNNL ELWAL++F +P +F F F + + S R
Sbjct: 289 LLITGTPLQNNLHELWALLNFLLPDIFNNSEDFDEWFNANNCLGDDSLIHR--------- 339
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------- 306
L +L F+LRR K ++ + L P E+ V +Q+++Y IL ++
Sbjct: 340 LHAVLRPFLLRRLKAEVEK----RLKPKKEVKVYIGLSKMQREMYTKILMRDIDIVNGAG 395
Query: 307 ------LPKLLALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSG 345
L +L + NH L + A GK+V+LD LL KL G
Sbjct: 396 KLEKMRLQNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVYNCGKMVILDKLLPKLKAQG 455
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
RVL+F+QMT+ LDIL+D+ R Y+Y RLDGS E+R I ++ A
Sbjct: 456 SRVLIFSQMTRMLDILEDYSLWRGYNYCRLDGSTPHEDRHRQIEEYN-----------AP 504
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
+ F+FM+STRAGG+G+NL AD V+ ++ DWNPQ+D QA+ RAHRIGQ+ V +
Sbjct: 505 DSKKFLFMLSTRAGGLGINLATADVVVLFDSDWNPQMDLQAMDRAHRIGQLKQVRVFRFI 564
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDD-VVDREVKERTAVETDDLRSII--FGLHLFDPK 522
T++TVEE I+ +AE KLRL V+ ++D K +A+ D++ ++I H+F K
Sbjct: 565 TDNTVEEKIVEKAEVKLRLDKLVIQQGRLLD---KTNSALNKDEMLNMIRHGADHVFASK 621
Query: 523 --AINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVN 563
I +E+ + + N E +A R E++ + R F ++
Sbjct: 622 DSDITDEDIESILAKSENRTQE--VAERLEKLGESSLRNFTLD 662
>gi|294655844|ref|XP_002770188.1| DEHA2C08294p [Debaryomyces hansenii CBS767]
gi|199430649|emb|CAG86104.4| DEHA2C08294p [Debaryomyces hansenii CBS767]
Length = 1034
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 191/546 (34%), Positives = 295/546 (54%), Gaps = 71/546 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q++GL+WLI Y ++ +L DEMGLGKTLQ ISFL YL++ + GP +++
Sbjct: 149 IHGKLRPYQIQGLNWLISLYENNLSGILADEMGLGKTLQTISFLGYLRYMRNINGPHIII 208
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E A++TP + VL G+++ R +E ++++ + FDV+
Sbjct: 209 VPKSTLDNWAREFARWTPDVRVLVLQGDKDSR-------HELIQKR-----LLACDFDVV 256
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+++Y++V+ ++ + W Y IIDEA R+KN S+L ++R F RLL+TGTP+QN
Sbjct: 257 VSSYEIVIREKASFRKFAWEYIIIDEAHRIKNEESLLSQIIR-MFHSRNRLLITGTPLQN 315
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VFG F F++ GK ++ L +L F+LRR
Sbjct: 316 NLHELWALLNFILPDVFGDSETFDQWFQNDNKDEHG--NGKEEDVILQLHKVLQPFLLRR 373
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL------------PKLLALS 314
K + + L P E+ + +Q+K Y IL K++ +LL +
Sbjct: 374 IKSDVEKS----LLPKQEVNLYVSMSDMQRKWYQKILEKDIDAVNGANKKESKTRLLNIV 429
Query: 315 ---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH L A S K+++LD LLKK G RVL+F+QM++
Sbjct: 430 MQLRKCCNHPYLFEGAEPGPPFTTDEHLVYNSQKMIILDKLLKKFKQEGSRVLIFSQMSR 489
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDI++D+ R Y Y R+DG +R AI Y+E G + FVF+++T
Sbjct: 490 MLDIMEDYCMFRDYEYCRIDGQTDHADRVNAIDE----------YNEPGSS-KFVFLLTT 538
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL AD VI ++ DWNPQ D QA+ RAHRIGQ V V+E+ +EE ++
Sbjct: 539 RAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVRVFRFVSENAIEEKVLE 598
Query: 477 RAERKLRLSHNVV--GDDVVDREVKERTAVETDDLRSII--FGLHLFDP-KAINNEESDD 531
RA +KLRL V+ G + + + A D+L ++I +F A N E +DD
Sbjct: 599 RATQKLRLDQLVIQQGRNAGNIGQQSNKATSKDELLTMIQHGAAEIFSKDSASNGENADD 658
Query: 532 LRLSGL 537
+ + +
Sbjct: 659 VDIDSI 664
>gi|307182228|gb|EFN69559.1| Chromodomain-helicase-DNA-binding protein 1 [Camponotus floridanus]
Length = 1831
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 198/487 (40%), Positives = 279/487 (57%), Gaps = 64/487 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++G++W+I + +V+L DEMGLGKT+Q I FL YL +Q GPFL++ PLS
Sbjct: 462 LRDYQMDGVNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTQQLHGPFLLVVPLS 521
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W EMA + P + + Y+G+ R IR YE S+ L F+V+LTTY
Sbjct: 522 TMTSWQREMALWAPDMNFVIYLGDVNSRNVIRE--YEWCYRGSKR-----LKFNVILTTY 574
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D+ L + W ++DEA RLKN S+LY L E F RLL+TGTP+QN+L E
Sbjct: 575 EIVLKDKALLGALNWAVLLVDEAHRLKNDDSLLYKALSE-FHTNHRLLITGTPLQNSLKE 633
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP+ F + +F + H ++A K ++ L L F+LRR K+
Sbjct: 634 LWALLHFIMPTKFVSWEEF-----EKQHDNAAQK------GYSKLHKQLEPFILRRVKKD 682
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRKE---LPKLLALSSRT-----------ANH 320
+ + + + E+T LQK+ Y IL K L K + SS T NH
Sbjct: 683 VEKSLPAKIEQILRVEMTSLQKQYYKWILTKNYDALRKGMKGSSSTFLNIVIELKKCCNH 742
Query: 321 QSLQNT------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
L SGKLV+LD LL +L ++GHRVL+F+QM + LDIL
Sbjct: 743 AFLTKPNEAEREKGNGDYLQTLIRGSGKLVLLDKLLVRLRDTGHRVLIFSQMVKMLDILS 802
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
++L+ R + ++RLDGSI+ E R A+ HF+ A G+ F F++STRAGG+G
Sbjct: 803 EYLQKRHFPFQRLDGSIKGELRKQALDHFN-----------AEGSQDFCFLLSTRAGGLG 851
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+++VEE I+ RA++K+
Sbjct: 852 INLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNKVNIYRLVTKNSVEEEIVERAKQKM 911
Query: 483 RLSHNVV 489
L H V+
Sbjct: 912 VLDHLVI 918
>gi|134076845|emb|CAK45266.1| unnamed protein product [Aspergillus niger]
Length = 1504
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 201/513 (39%), Positives = 273/513 (53%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +LK QV+G++++ ++ NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 431 FLQNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFINWLRHVRRQQGPFV 490
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL--P 148
V+ PLS W +TP L + Y G R +R E M + +P
Sbjct: 491 VVVPLSTMPSWAETFDYWTPDLNYVVYNGNEAARTVLR--------EHELMVDGNPRRPK 542
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL+D FLSQ W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 543 FNVLLTTYEYVLLDSAFLSQFKWQFMAVDEAHRLKNRESQLYLKLLE-FRSPARLLITGT 601
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL AL+ F P + + A H + L + F
Sbjct: 602 PIQNNLAELSALLDFLNPGLVHIDADMDLNAEAASH------------KLAELTKAIQPF 649
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRK----------------- 305
MLRRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 650 MLRRTKSK-VESD---LPPKTEKIIRVELSDVQLEYYKNILTKNYAALNDGARGQKQSLL 705
Query: 306 ----ELPK--------------LLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
EL K +L S+R + T+SGK+++LD LL KL GHR
Sbjct: 706 NIMMELKKASNHPFMFPNAEARILEGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHR 765
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++E R Y+Y+RLDG+I A R AI H Y+ G N
Sbjct: 766 VLIFSQMVKMLDILGDYMEFRGYTYQRLDGTIPAAARRLAIEH----------YNAPGSN 815
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
D F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 816 D-FAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 874
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 875 DTVEEEVIERARNKLLLEFITIQRGVTDKEATE 907
>gi|317030844|ref|XP_001392337.2| chromodomain helicase (Chd1) [Aspergillus niger CBS 513.88]
gi|350629509|gb|EHA17882.1| hypothetical protein ASPNIDRAFT_55859 [Aspergillus niger ATCC 1015]
Length = 1516
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 201/513 (39%), Positives = 273/513 (53%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +LK QV+G++++ ++ NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 443 FLQNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFINWLRHVRRQQGPFV 502
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL--P 148
V+ PLS W +TP L + Y G R +R E M + +P
Sbjct: 503 VVVPLSTMPSWAETFDYWTPDLNYVVYNGNEAARTVLR--------EHELMVDGNPRRPK 554
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL+D FLSQ W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 555 FNVLLTTYEYVLLDSAFLSQFKWQFMAVDEAHRLKNRESQLYLKLLE-FRSPARLLITGT 613
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL AL+ F P + + A H + L + F
Sbjct: 614 PIQNNLAELSALLDFLNPGLVHIDADMDLNAEAASH------------KLAELTKAIQPF 661
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRK----------------- 305
MLRRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 662 MLRRTKSK-VESD---LPPKTEKIIRVELSDVQLEYYKNILTKNYAALNDGARGQKQSLL 717
Query: 306 ----ELPK--------------LLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
EL K +L S+R + T+SGK+++LD LL KL GHR
Sbjct: 718 NIMMELKKASNHPFMFPNAEARILEGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHR 777
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++E R Y+Y+RLDG+I A R AI H Y+ G N
Sbjct: 778 VLIFSQMVKMLDILGDYMEFRGYTYQRLDGTIPAAARRLAIEH----------YNAPGSN 827
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
D F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 828 D-FAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 886
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 887 DTVEEEVIERARNKLLLEFITIQRGVTDKEATE 919
>gi|146413953|ref|XP_001482947.1| hypothetical protein PGUG_04902 [Meyerozyma guilliermondii ATCC
6260]
Length = 1034
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 190/515 (36%), Positives = 285/515 (55%), Gaps = 72/515 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+WLI Y ++ +L DEMGLGKTLQ I+FL YL++ + GPF+++ P S
Sbjct: 122 LREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTIAFLGYLRYIKNIDGPFIIIVPKS 181
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
D W E A++TP+++ + G ++ R E +K ++ FDVL+T++
Sbjct: 182 TLDNWRREFARWTPEVKAVVLQGNKDDRA-------EFIKNCLLQAD-----FDVLITSF 229
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ L + W Y ++DEA R+KN S L ++R F RLL+TGTP+QNNL E
Sbjct: 230 EMVMREKSQLKKFRWQYIVVDEAHRIKNEDSSLSQIIR-LFYSKNRLLITGTPLQNNLHE 288
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P VFG F F+ S + + G + L +LS F+LRR K
Sbjct: 289 LWALLNFLLPDVFGDSEVFDEWFE----SQGSKEEGNQDKVVQQLHKVLSPFLLRRVKSD 344
Query: 277 LVECGHLMLPPL-----TEITVLQKKVYASILRKEL-------------PKLLALS---S 315
VE +LP + +T +Q + Y +L K++ +LL +
Sbjct: 345 -VETS--LLPKIETNVYCGMTEMQIRWYKKLLEKDIDAVNGVVGKREGKTRLLNIVMQLR 401
Query: 316 RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
+ NH L + A SGK+++LD +LKK G RVL+F+QM++ LDI
Sbjct: 402 KCCNHPYLFDGAEPGPPYTTDEHLAYNSGKMIILDKMLKKFREQGSRVLIFSQMSRLLDI 461
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L+D+ LR Y Y R+DGS E+R AI ++ A D F+F+++TRAGG
Sbjct: 462 LEDYCYLRDYEYCRIDGSTAHEDRIEAIDLYN-----------APDLDKFIFLLTTRAGG 510
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL +AD VI Y+ DWNPQ D QA+ RAHRIGQ V VTE+ +EE ++ RA +
Sbjct: 511 LGINLTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVLERAAQ 570
Query: 481 KLRLSHNVVGDDVVDREVKERTAV--ETDDLRSII 513
KLRL V+ R+V A+ DDL +I
Sbjct: 571 KLRLDQLVIQQ---GRQVTNANAIGNSKDDLLGMI 602
>gi|62898724|dbj|BAD97216.1| chromodomain helicase DNA binding protein 1-like variant [Homo
sapiens]
Length = 702
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 229/641 (35%), Positives = 320/641 (49%), Gaps = 112/641 (17%)
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL 147
PFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 1 PFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR------- 49
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+TG
Sbjct: 50 -FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTG 107
Query: 208 TPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGIL 265
TPIQN+L EL++L+ F P +F + F+ ++D S E + L +L
Sbjct: 108 TPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASELHKLL 158
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTAN 319
F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + TA
Sbjct: 159 QPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENETAK 211
Query: 320 HQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHRVL 349
LQN ASGKL +LD LL LY+ GHRVL
Sbjct: 212 KVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVL 271
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
LF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 272 LFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQPI 318
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+ T
Sbjct: 319 FVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQDDLQAAARAHRIGQNKSVKVIRLIGRDT 378
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNE 527
VEE++ R+A KL+L++ ++ ++ A L I+ FGL L + +
Sbjct: 379 VEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMD 438
Query: 528 ESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPD 587
E D + G + V G ++ N + L E D S S+
Sbjct: 439 EIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQ 498
Query: 588 LDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK------- 626
L + ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 499 L-VSLQKTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAK 557
Query: 627 ----LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 558 RRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 598
>gi|367043642|ref|XP_003652201.1| CHD1-like protein [Thielavia terrestris NRRL 8126]
gi|346999463|gb|AEO65865.1| CHD1-like protein [Thielavia terrestris NRRL 8126]
Length = 1675
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 202/510 (39%), Positives = 273/510 (53%), Gaps = 74/510 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ GL++L + G NV+L DEMGLGKT+Q +SFLS+L+ + GPFLV+ P
Sbjct: 453 GELREFQMRGLNFLALNWTRGNNVILADEMGLGKTVQTVSFLSWLRNDRGQEGPFLVVAP 512
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LSV W + P L + Y+G R NIR+ YE + N F+VLLT
Sbjct: 513 LSVIPAWCDTFNHWAPDLNYVVYLGPEAARSNIRQ--YELFID----GNPKKTKFNVLLT 566
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+YD +L D L I W +DEA RLKN S LY L F +P ++L+TGTPIQNNL
Sbjct: 567 SYDYILADVDHLKGIKWQVLAVDEAHRLKNRESQLYVKL-NSFGVPCKVLITGTPIQNNL 625
Query: 215 SELWALMHFCMPS--VFGTLNQFLSTFKD---AVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+EL AL+ F P + + LST + KR K +E+ L ++ F+
Sbjct: 626 AELSALLDFLNPGKVLIDEELELLSTADNKEVTDEQQDEAKRLKTQEKLRELHNSIAPFI 685
Query: 270 LRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRTANH-QS 322
LRRTK+ VE LPP T E++ +Q + Y +IL + ALS + H QS
Sbjct: 686 LRRTKE-TVESD---LPPKTEKIIRVELSDVQLEYYKNILTR---NYAALSDASNGHKQS 738
Query: 323 LQN-------------------------------------TASGKLVVLDLLLKKLYNSG 345
L N T+SGK+++LD LL KL G
Sbjct: 739 LLNIMMELKKVSNHPYMFQGAEERVLGGSTRREDQIKGLITSSGKMMLLDQLLAKLKKDG 798
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
HRVL+F+QM + LDIL D+L +R Y ++RLDG+I A R AI HF+ + +
Sbjct: 799 HRVLIFSQMVKMLDILGDYLRVRGYQFQRLDGTIPAGPRRMAINHFNAEDS--------- 849
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
D F F++STRAGG+G+NL+ ADTVI Y+ DWNPQ D QA+ RAHRIGQ V LV
Sbjct: 850 --DDFCFLLSTRAGGLGINLMTADTVIIYDSDWNPQADLQAMARAHRIGQKKPVNVYRLV 907
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDDVVD 495
+ T+EE ++ RA KL L + + V D
Sbjct: 908 AKQTIEEEVVTRARNKLFLEYLTIQAGVTD 937
>gi|444318089|ref|XP_004179702.1| hypothetical protein TBLA_0C03810 [Tetrapisispora blattae CBS 6284]
gi|387512743|emb|CCH60183.1| hypothetical protein TBLA_0C03810 [Tetrapisispora blattae CBS 6284]
Length = 1069
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 181/490 (36%), Positives = 273/490 (55%), Gaps = 71/490 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++G++WLI + G+ +L DEMGLGKTLQ I+FL YL++ + PGPFLV+ P S
Sbjct: 137 LRSYQIQGVNWLISLHKNGLAGILADEMGLGKTLQTITFLGYLRYVEKKPGPFLVIAPKS 196
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
+ W+ E+ K+TP + G++ +R + +T + F++++ +Y
Sbjct: 197 TLNNWLREINKWTPDVNAFILQGDKVERSELIKT------------KLLECDFEIVVASY 244
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++++ ++ +I W Y +IDEA R+KN S+L VLRE F RLL+TGTP+QNNL E
Sbjct: 245 EIIIREKAAFRKIDWEYIVIDEAHRIKNEESMLSQVLRE-FSSRNRLLITGTPLQNNLHE 303
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P +F + F S F + S + KI +Q L +L F+LRR K
Sbjct: 304 LWALLNFLLPDIFSSSEDFDSWFS---SNESEEDQDKIVKQ---LHTVLQPFLLRRIKSD 357
Query: 277 LVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLALS--- 314
+ L P E+ + +QKK Y IL K+L +LL +
Sbjct: 358 V----ETSLLPKKELNLYVGMSNMQKKWYKQILEKDLDAVNGSNGNKESKTRLLNIVMQL 413
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A S KL VLD LL+K+ G RVL+F+QM++ LD
Sbjct: 414 RKCCNHPYLFDGAEPGPPYTTDEHLVYNSAKLNVLDKLLEKVKEEGSRVLIFSQMSRVLD 473
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
I++D+ R Y Y R+DG E+R AAI ++ A + F+F+++TRAG
Sbjct: 474 IMEDYCYFRGYEYCRIDGQTAHEDRIAAIDEYN-----------APDSSKFIFLLTTRAG 522
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD V+ ++ DWNPQ D QA+ RAHRIGQ V VT+++VEE I+ RA
Sbjct: 523 GLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQKKQVKVYRFVTDNSVEEKILERAT 582
Query: 480 RKLRLSHNVV 489
+KL+L V+
Sbjct: 583 QKLKLDQLVI 592
>gi|221480872|gb|EEE19293.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii
GT1]
gi|221501605|gb|EEE27375.1| transcription regulatory protein SNF2, putative [Toxoplasma gondii
VEG]
Length = 1200
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 197/535 (36%), Positives = 295/535 (55%), Gaps = 69/535 (12%)
Query: 38 KPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSV 97
KP+Q+EGL+WLI+ + G+N +L DEMGLGKT Q IS L++LK + GP LVL P S
Sbjct: 258 KPYQLEGLNWLIQLHERGMNGILADEMGLGKTYQTISLLAFLKEGKGVDGPHLVLAPKST 317
Query: 98 TDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM-----SNVSPLPFDVL 152
W++E KF P + +R +G++E RR RT E +E ++ V P DV+
Sbjct: 318 IGNWMTEFRKFCPSINAVRVLGDKETRR---RTPDEDGEEGAKEEKEEDDGVLPDRVDVV 374
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ ++++ ++ W Y IIDEA R+KN SS L R F RLL+TGTP+QN
Sbjct: 375 VTSFEMCILERAQFLKVDWEYIIIDEAHRIKNESSKLAQTAR-LFNTKHRLLLTGTPLQN 433
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-------FTSLKGIL 265
NL ELWAL++F PS+F + +F F D + A +E+ T L IL
Sbjct: 434 NLRELWALLNFLFPSLFSSSAEFEHLF-DLTGTGEAGSEMTAEEREERNMKIVTRLHRIL 492
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKL--------- 310
FMLRR K+++++ +PP E+ + +QK++Y +L K + L
Sbjct: 493 RPFMLRRVKKEVLK----EMPPKKELLLVVPLSAMQKQLYKDLLTKNVAALQGAEGAGRT 548
Query: 311 ----LALSSRTA-NHQSLQNT---------------ASGKLVVLDLLLKKLYNSGHRVLL 350
LA+ R A NH L + +GKL D LL++L R L+
Sbjct: 549 QLLNLAMQLRKACNHPYLFDGYESEHADPFGEHVIENAGKLRFCDRLLRRLIQENRRCLI 608
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F QMT+ +DIL+D+ +R + Y R+DG+ +ER I F+ A G+D
Sbjct: 609 FTQMTKMIDILEDYCRIRLFKYCRIDGNTSGDERDRQIEAFN-----------APGSDIP 657
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+F++STRAGG+G+NL ADTVI Y+ DWNPQVD QA+ R HRIGQ + V LV EHT+
Sbjct: 658 IFLLSTRAGGLGINLATADTVILYDSDWNPQVDLQAMDRVHRIGQKSAVNVYRLVHEHTI 717
Query: 471 EEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKA 523
E+ I+ RA KL+L ++ + + ++ + ++L +++ FG H+F A
Sbjct: 718 EQKIIERAMLKLQLDTAIIQQGRLSDQQNQQKQLSKNELMTMVQFGADHIFKSGA 772
>gi|409045016|gb|EKM54497.1| hypothetical protein PHACADRAFT_258377 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1433
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 191/494 (38%), Positives = 268/494 (54%), Gaps = 74/494 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + G N +L DEMGLGKT+Q++SFL+YL GPFLV+ P
Sbjct: 376 GELKDFQLTGLNWLAYLWSNGENGILADEMGLGKTVQSVSFLAYLFHEMRQFGPFLVIVP 435
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W S+ A + P L V+ Y+G R IR + ++ +M +VLLT
Sbjct: 436 LSTITAWQSQFATWGPDLNVITYIGNANAREVIRTFEFGPSNKKLKM--------NVLLT 487
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++ L D LS I W +DEA RLKN S LY LR F ++L+TGTP+QNN+
Sbjct: 488 TYELTLRDARELSDIKWQVLAVDEAHRLKNSESQLYEALRA-FSAASKVLITGTPLQNNV 546
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F N+F D H KIKE L L A MLRR K
Sbjct: 547 KELLSLMHFLMPEKFHLSNEF--DLTDVDHEE------KIKE----LHKQLEALMLRRLK 594
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS------------- 315
+ ++ LP + E++ LQ +Y +IL K L+ ++
Sbjct: 595 KDVLTS----LPTKSERILRVEMSALQTHLYKNILTKNFQGLIKSANGNTNISLLNIAME 650
Query: 316 --RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L SGK+V+LD LL +L HRVL+F+QM +
Sbjct: 651 LKKAANHPYLFEGVEPESATSEELLKGLVMNSGKIVLLDKLLARLRQDSHRVLIFSQMVR 710
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LD+L ++++LR Y ++RLDG + +E R +I HF+ A G+ F F++ST
Sbjct: 711 MLDLLSEYMQLRGYQFQRLDGMVSSEARKKSIAHFN-----------APGSPDFAFLLST 759
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE ++
Sbjct: 760 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLE 819
Query: 477 RAERKLRLSHNVVG 490
RA++K+ L + ++
Sbjct: 820 RAKKKMVLEYAIIN 833
>gi|380486064|emb|CCF38946.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1119
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 269/499 (53%), Gaps = 83/499 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +QV GL+WLI + G++ +L DEMGLGKTLQ I+FL YL+ GP +V+
Sbjct: 178 IQGQMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTIAFLGYLRHIMGITGPHIVI 237
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI--RRTMYEHVKEQSQMSNVSPLPFD 150
P S D W E K+TP++ VL G +E+R + R + E FD
Sbjct: 238 VPKSTLDNWKREFEKWTPEVHVLVLQGAKEERNALINDRLVNED--------------FD 283
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
V +T+Y++VL ++G L + W Y IIDEA R+KN S L V+R F RLL+TGTP+
Sbjct: 284 VCITSYEMVLREKGHLKKFAWEYIIIDEAHRIKNEESSLAQVIR-VFNSRNRLLITGTPL 342
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT---SLKGILSA 267
QNNL ELWAL++F +P VFG F F G+ ++Q T L +L
Sbjct: 343 QNNLHELWALLNFLLPDVFGDSEAFDQWFS-----------GREQDQDTVVQQLHRVLRP 391
Query: 268 FMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS------ 315
F+LRR K + + L P E+ V +Q K Y IL K++ + +
Sbjct: 392 FLLRRVKSDVEKS----LLPKKEVNVYLGMSEMQIKWYQKILEKDIDAVNGANGKRESKT 447
Query: 316 ----------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+ NH L A +GK+VVLD LL ++ G RVL+
Sbjct: 448 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIYNAGKMVVLDKLLTRMRKQGSRVLI 507
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R+Y Y R+DG E+R AAI ++ G++ F
Sbjct: 508 FSQMSRLLDILEDYCVFREYKYCRIDGGXAHEDRIAAIDEYN-----------KPGSEKF 556
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+F+++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VT++ +
Sbjct: 557 IFLLTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAI 616
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 617 EEKVLERAAQKLRLDQLVI 635
>gi|156845729|ref|XP_001645754.1| hypothetical protein Kpol_1010p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156116422|gb|EDO17896.1| hypothetical protein Kpol_1010p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 661
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 189/489 (38%), Positives = 280/489 (57%), Gaps = 69/489 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+WLI + ++ +L DE GLGKTLQ ISFL YL++ + GPFLV+ P S
Sbjct: 145 LRDYQIQGLNWLISLHENNLSGILADETGLGKTLQTISFLGYLRYIKKIDGPFLVIVPKS 204
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
D W E K+TP+++ + G++E R + + + K FDVL+T+Y
Sbjct: 205 TLDNWRREFNKWTPEVKAVVLHGDKETRNTLLQDVILEAK------------FDVLITSY 252
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ L +I W Y +IDEA R+KN S L ++R F RLL+TGTP+QNNL E
Sbjct: 253 EMVIKEKSTLKKIAWYYIVIDEAHRIKNEQSALSQIIR-LFYSKNRLLITGTPLQNNLHE 311
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P VFG F F+ +++ + + +Q L +L+ F+LRR K
Sbjct: 312 LWALLNFLLPDVFGDAALFDEWFE---QNNNDEDQEVVVQQ---LHSVLNPFLLRRIKAD 365
Query: 277 LVECGHLMLPPL-----TEITVLQKKVYASILRKEL-------------PKLLALS---S 315
+ + +LP + +T +Q+K Y S+L K++ +LL +
Sbjct: 366 VEKS---LLPKIETNLYVGMTQMQRKWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLR 422
Query: 316 RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
+ NH L A SGK+++LD LLKKL SG RVL+F+QM++ LDI
Sbjct: 423 KCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIILDKLLKKLKESGSRVLIFSQMSRLLDI 482
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L+D+ R Y+Y R+DGS EER AI ++ + D FVF+++TRAGG
Sbjct: 483 LEDYCYFRGYNYCRIDGSTSHEERIEAIDEYNEPDS-----------DKFVFLLTTRAGG 531
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NLV ADTV+ Y+ DWNPQ D QA+ RAHRIGQ V VTE+ +EE ++ RA +
Sbjct: 532 LGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQ 591
Query: 481 KLRLSHNVV 489
KLRL V+
Sbjct: 592 KLRLDQLVI 600
>gi|350400735|ref|XP_003485940.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Bombus
impatiens]
Length = 1797
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 207/541 (38%), Positives = 301/541 (55%), Gaps = 75/541 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G L+ +Q++GL+W+I + +V+L DEMGLGKT+Q I FL YL + GPFL+
Sbjct: 442 GRDLTLRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTHQLYGPFLL 501
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W EM+++ P + + Y+G+ R IR + + ++ L F+
Sbjct: 502 VVPLSTMTSWQREMSQWAPDMNFVTYLGDVTSRNVIREYEWCYSSKR--------LKFNA 553
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
+LTTY++VL D+ FL + W ++DEA RLKN S+LY L E F RLL+TGTP+Q
Sbjct: 554 ILTTYEIVLKDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAE-FHTNHRLLITGTPLQ 612
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
N+L ELWAL+HF MP+ F + +F + H ++A K ++ L L F+LR
Sbjct: 613 NSLKELWALLHFIMPTKFNSWEEF-----EKEHDNAAQK------GYSKLHKQLEPFILR 661
Query: 272 RTKQKLVECGHLMLPPL--TEITVLQKKVYASILRK---------------------ELP 308
R K+ + + + + E+T LQK+ Y IL K EL
Sbjct: 662 RVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTMTFLNIVIELK 721
Query: 309 KLL--------ALSSRTANHQS-LQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
K S R N++ LQ SGKLV+LD LL +L +GHRVL+F+QM +
Sbjct: 722 KCCNHAFLTKPTESERKDNNEDYLQQLIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRM 781
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL ++L+ + + ++RLDGSI+ E R A+ HF+ A G+ F F++STR
Sbjct: 782 LDILGEYLQKKHFPFQRLDGSIKGELRKQALDHFN-----------AEGSQDFCFLLSTR 830
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+++VEE I+ R
Sbjct: 831 AGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVER 890
Query: 478 AERKLRLSHNVVGD-DVVDREVKERTAVETD-------DLRSII-FGLH-LFDPKAINNE 527
A++K+ L H V+ D R V ++ + T+ DL +I+ FG LF + +E
Sbjct: 891 AKQKMVLDHLVIQRMDTTGRTVLDKKSAGTNNNPFNKEDLNAILKFGAEDLFKDEEDGDE 950
Query: 528 E 528
E
Sbjct: 951 E 951
>gi|302833439|ref|XP_002948283.1| hypothetical protein VOLCADRAFT_80059 [Volvox carteri f.
nagariensis]
gi|300266503|gb|EFJ50690.1| hypothetical protein VOLCADRAFT_80059 [Volvox carteri f.
nagariensis]
Length = 1091
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 191/516 (37%), Positives = 285/516 (55%), Gaps = 69/516 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+W+I Y G+N +L DEMGLGKTLQ IS ++YL + GP +V+ P S
Sbjct: 170 LREYQMQGLNWMIHLYDNGINGILADEMGLGKTLQTISLVAYLYEYRGITGPHIVITPKS 229
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
WV+E +F P + V ++ G E+R H KE S +P FDV++T+Y
Sbjct: 230 TLGNWVNEFRRFCPIIRVTKFHGNNEERM--------HQKE----STCAPGRFDVVVTSY 277
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y IIDEA R+KN +S L V+R+ RLL+TGTP+QNNL E
Sbjct: 278 EMVIKEKNHFKRFHWRYIIIDEAHRIKNENSRLSQVVRQ-LKTNYRLLITGTPLQNNLHE 336
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P +F + +F F ++ S K ++ +Q L +L F+LRR K
Sbjct: 337 LWALLNFLLPEIFSSAEKFEEWF--SMGDGSKEKEAEVVQQ---LHKVLRPFLLRRVKSD 391
Query: 277 LVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRT------------A 318
VE G LPP E ++ +QKK YA++L+K++ L + R
Sbjct: 392 -VERG---LPPKKETILKIGMSDMQKKWYAALLQKDIDALNGGADRAKLLNVVMQLRKCC 447
Query: 319 NHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQD 363
NH L A SGKLV+LD LL +L RVL+F+QMT+ +DIL+D
Sbjct: 448 NHPYLFQGAEPGPPFITGEHLIENSGKLVLLDKLLPRLKERDSRVLIFSQMTRMIDILED 507
Query: 364 FLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGL 423
+ R Y Y R+DG+ ++R I F+ ++ F+F++STRAGG+G+
Sbjct: 508 YCLYRGYGYCRIDGNTGGDDRDNMIDEFNKPNS-----------SKFIFLLSTRAGGLGI 556
Query: 424 NLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLR 483
NL AD V+ Y+ DWNPQ+D QA+ RAHRIGQ V E+++EE ++ +A +KLR
Sbjct: 557 NLATADIVVLYDSDWNPQMDLQAMDRAHRIGQKKEVQVFRFCIENSIEEKVIEKAYKKLR 616
Query: 484 LSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL 518
L V+ + T V DDL +++ +G L
Sbjct: 617 LDALVIQQGRLTE--NNATKVNKDDLINMVRYGAEL 650
>gi|367020200|ref|XP_003659385.1| CDH1-like protein [Myceliophthora thermophila ATCC 42464]
gi|347006652|gb|AEO54140.1| CDH1-like protein [Myceliophthora thermophila ATCC 42464]
Length = 1670
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 201/507 (39%), Positives = 277/507 (54%), Gaps = 68/507 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q++GL++L + G NV+L DEMGLGKT+Q +SFLS+L+ + GPFLV+ P
Sbjct: 451 GELREFQLKGLNFLALNWTRGNNVILADEMGLGKTVQTVSFLSWLRNDRGQEGPFLVVAP 510
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LSV W + P L + Y+G R NIR YE + N F+VL+T
Sbjct: 511 LSVIPAWCDTFNNWAPDLNYVVYLGPEAARANIRE--YELFID----GNPKKTKFNVLVT 564
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+YD +L D L I W +DEA RLKN S LY L F +P R+L+TGTPIQNNL
Sbjct: 565 SYDYILADAETLKGIKWQVLAVDEAHRLKNRESQLYYKL-NSFGIPCRVLITGTPIQNNL 623
Query: 215 SELWALMHFCMPS--VFGTLNQFLSTF--KDAV-HSSSAPKRGKIKEQFTSLKGILSAFM 269
+EL AL+ F P + + LS+ KDA + +R K +E+ L ++ F+
Sbjct: 624 AELSALLDFLNPGKVLIDEELELLSSADNKDATDEEQNEARRLKTQEKLRELHSAIAPFI 683
Query: 270 LRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRK------------------ 305
LRRTK+ VE LPP T E++ +Q + Y +IL +
Sbjct: 684 LRRTKE-TVESD---LPPKTEKIIRVELSDVQLEYYKNILTRNYAALRDASNGHKQSLLN 739
Query: 306 ---ELPK--------------LLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRV 348
EL K +LA S+R + T+SGK+++LD LL KL GHRV
Sbjct: 740 IMMELKKVSNHPYMFQGAEERVLAGSTRREDQIKGLITSSGKMMLLDQLLAKLKKDGHRV 799
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL D+L +R Y ++RLDG+I A R AI HF+ + + +
Sbjct: 800 LIFSQMVKMLDILGDYLRVRGYQFQRLDGTIPAGPRRMAINHFNAEDS-----------E 848
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+G+NL+ ADTVI Y+ DWNPQ D QA+ RAHRIGQ V LV +
Sbjct: 849 DFCFLLSTRAGGLGINLMTADTVIIYDSDWNPQADLQAMARAHRIGQKKPVSVYRLVAKQ 908
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVD 495
T+EE ++ RA KL L + + V D
Sbjct: 909 TIEEEVVNRARNKLFLEYLTIQAGVTD 935
>gi|358372937|dbj|GAA89538.1| chromodomain helicase [Aspergillus kawachii IFO 4308]
Length = 1504
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 201/513 (39%), Positives = 273/513 (53%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +LK QV+G++++ ++ NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 432 FLQNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFINWLRHVRRQQGPFV 491
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL--P 148
V+ PLS W +TP L + Y G R +R E M + +P
Sbjct: 492 VVVPLSTMPSWAETFDHWTPDLNYVVYNGNEAARTVLR--------EHELMVDGNPRRPK 543
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL+D FLSQ W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 544 FNVLLTTYEYVLLDSTFLSQFKWQFMAVDEAHRLKNRESQLYLKLLE-FRSPARLLITGT 602
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL AL+ F P + + A H + L + F
Sbjct: 603 PIQNNLAELSALLDFLNPGLVHIDADMDLNAEAASH------------KLAELTKAIQPF 650
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRK----------------- 305
MLRRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 651 MLRRTKSK-VESD---LPPKTEKIIRVELSDVQLEYYKNILTKNYAALNDGARGQKQSLL 706
Query: 306 ----ELPK--------------LLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
EL K +L S+R + T+SGK+++LD LL KL GHR
Sbjct: 707 NIMMELKKASNHPFMFPNAEARILEGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHR 766
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++E R Y+Y+RLDG+I A R AI H Y+ G N
Sbjct: 767 VLIFSQMVKMLDILGDYMEFRGYTYQRLDGTIPAAARRLAIEH----------YNAPGSN 816
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
D F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 817 D-FAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 875
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 876 DTVEEEVIERARNKLLLEFITIQRGVTDKEASE 908
>gi|301095371|ref|XP_002896786.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108669|gb|EEY66721.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1092
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/521 (35%), Positives = 279/521 (53%), Gaps = 79/521 (15%)
Query: 8 QVAAKIIHDNDE----RDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDE 63
Q A+ + D D+ R Q P +FG +KP+Q+EGL+W+IR + GVN +L DE
Sbjct: 124 QADAQALQDMDDARYTRITQQP-SIIKFGT---MKPYQLEGLNWMIRLHDSGVNGILADE 179
Query: 64 MGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQ 123
MGLGKTLQ+IS L+YL+ ++ GP +++ P S W+ E+ ++ P ++ +++G +++
Sbjct: 180 MGLGKTLQSISLLAYLREARGIEGPHIIIVPKSTVGNWMRELKRWCPSIKAFKFMGSKDE 239
Query: 124 RRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLK 183
R R T+ FD L+ +Y+V ++++ L +I W Y +IDEA R+K
Sbjct: 240 RAVQRETVVRQ-------------DFDALVLSYEVAIIEKSILQKIKWKYLLIDEAHRVK 286
Query: 184 NPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAV 243
N +S L V+RE F + RLL+TGTP+QNNL ELWAL++F +P VF F + F
Sbjct: 287 NENSKLSKVVRE-FKVEHRLLITGTPLQNNLHELWALLNFLLPDVFSDSEDFDAWF---- 341
Query: 244 HSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKK 297
+ ++ + L IL F+LRR K + LPP E ++ +Q++
Sbjct: 342 ---NVDEQEGQENVIKKLHTILRPFLLRRLKADVEHS----LPPKIETKLYVGLSEMQRE 394
Query: 298 VYASILRKELPKLLALSS--------------RTANHQSLQNTA---------------S 328
Y +L ++ L A+ + NH L A
Sbjct: 395 WYMRVLHRDATHLNAIGGSDRVRLLNILMQLRKVCNHPYLFEGAEPGPPYQEGPHLWENC 454
Query: 329 GKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAI 388
GK+ +L LL KL G RVL+F QMT +DIL+D++ + Y RLDGS + E+R +
Sbjct: 455 GKMTLLHKLLPKLQAQGSRVLIFCQMTSMMDILEDYMRYFSHDYCRLDGSTKGEDRDNMM 514
Query: 389 RHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQ 448
F+ G+ F F++STRAGG+G+NL AD VI ++ DWNPQVD QA+
Sbjct: 515 EEFN-----------EPGSSKFCFLLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMD 563
Query: 449 RAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
RAHRIGQ V +T+ TVEE I+ RAERKL L ++
Sbjct: 564 RAHRIGQTKIVRVFRFITDGTVEEKIVERAERKLYLDAAII 604
>gi|452819764|gb|EME26817.1| chromatin remodeling complex SWI/SNF component, Snf2 [Galdieria
sulphuraria]
Length = 1502
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 271/497 (54%), Gaps = 69/497 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK +Q++GL WL+ Y+ +N +L DEMGLGKT+QAI+ L+YL + + GPFL++ PLS
Sbjct: 790 LKQYQIQGLQWLVSLYVNHLNGILADEMGLGKTIQAIALLAYLVEKKNNSGPFLIVVPLS 849
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E K+ P L V+ + G+R+Q R+++Y+ V + PL F+V LTT+
Sbjct: 850 TLSNWELEFEKWAPSLHVVVFKGDRKQ----RKSLYDTV--------IQPLNFNVCLTTF 897
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ V + L ++ W Y I+DE R+KN S + +L + F RLLMTGTP+QN+LSE
Sbjct: 898 EFVSRGKNLLGKVEWNYLIVDEGHRMKNHESRITAILSQQFKSRSRLLMTGTPLQNSLSE 957
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT-----SLKGILSAFMLR 271
LW+L++F +P++F + F S F A +S ++ + E+ T L +L F+LR
Sbjct: 958 LWSLLNFVLPNIFSSSETFESWFA-APFASIPGEKADLSEEETLLIIRRLHQVLRPFLLR 1016
Query: 272 RTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELPKLLALSSR--------- 316
R K ++ G LP L EI+ QK VY ILR + LS R
Sbjct: 1017 RLKSDVLRMGD-QLPTKQEHVILCEISAWQKMVYRRILRGQKVVFTGLSGRRRHDFLSNP 1075
Query: 317 ------TANHQSLQNT------------------ASGKLVVLDLLLKKLYNSGHRVLLFA 352
ANH L ASGK + D+LL+K +GHRVL+F
Sbjct: 1076 AMQLRKMANHPYLFYEDYSEELMLGNRDSEELFRASGKFYMFDMLLQKFLRTGHRVLVFN 1135
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QMT+ +D+ + L R ++ RLDGS ++E R + F+ I V
Sbjct: 1136 QMTRVIDLQERLLRFRGINFLRLDGSTKSEMRRNIVEEFNRSDTI-----------YHVL 1184
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
+++TRAGG+G+NL +ADTVI ++ DWNPQ+D QA RAHRIGQ VL + +V +T+EE
Sbjct: 1185 LLTTRAGGLGVNLQSADTVIIFDSDWNPQMDLQAQDRAHRIGQDKEVLVLRIVAANTIEE 1244
Query: 473 VIMRRAERKLRLSHNVV 489
I+ RA K + V+
Sbjct: 1245 RILERASYKKDMEQKVI 1261
>gi|67538946|ref|XP_663247.1| hypothetical protein AN5643.2 [Aspergillus nidulans FGSC A4]
gi|40743546|gb|EAA62736.1| hypothetical protein AN5643.2 [Aspergillus nidulans FGSC A4]
gi|259484887|tpe|CBF81492.1| TPA: SNF2 family helicase/ATPase, putative (AFU_orthologue;
AFUA_4G13460) [Aspergillus nidulans FGSC A4]
Length = 1111
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/494 (37%), Positives = 272/494 (55%), Gaps = 73/494 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ E++ +Q+ GL+WL+ + G++ +L DEMGLGKTLQ ISF+ YL+ GP LV
Sbjct: 189 IQGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQTISFIGYLRHLCDITGPHLVA 248
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E K+TP++ VL G++E+R + + E + ++ FDV
Sbjct: 249 VPKSTLDNWKREFHKWTPEVNVLVLQGDKEERHKL---INERLLDED---------FDVC 296
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+++L ++ L + W Y IIDEA R+KN S L ++R F RLL+TGTP+QN
Sbjct: 297 ITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQIIRV-FNSRNRLLITGTPLQN 355
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VFG F D S+ + + +Q L +L F+LRR
Sbjct: 356 NLHELWALLNFLLPDVFGDSEAF-----DQWFSNQEADQDTVVQQ---LHRVLRPFLLRR 407
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K + + L P E+ + +Q K Y IL K++ +LL +
Sbjct: 408 VKSDVEKS----LLPKKEVNLYVPMSSMQVKWYQKILEKDIDAVNGAGGKKESKTRLLNI 463
Query: 314 S---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NH L A SGK+V+LD LL ++ G RVL+F+QM+
Sbjct: 464 VMQLRKCCNHPYLFEGAEEGPPYTNDVHIINNSGKMVILDKLLARMQAQGSRVLIFSQMS 523
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ LRKY Y R+DG+ E+R AAI ++ + D F+F+++
Sbjct: 524 RVLDILEDYCALRKYQYCRIDGTTAHEDRIAAIDEYNKPDS-----------DKFIFLLT 572
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ +TE +EE ++
Sbjct: 573 TRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFITESAIEERVL 632
Query: 476 RRAERKLRLSHNVV 489
RA +KLRL V+
Sbjct: 633 ERAAQKLRLDQLVI 646
>gi|443692402|gb|ELT93996.1| hypothetical protein CAPTEDRAFT_18898 [Capitella teleta]
Length = 910
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 189/510 (37%), Positives = 275/510 (53%), Gaps = 75/510 (14%)
Query: 20 RDGQTPV-----DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAIS 74
R TPV + + E++ +QV GL+W+I Y G+N +L DEMGLGKTLQ IS
Sbjct: 41 RKASTPVITRFESSPSYIKGGEMRDYQVRGLNWMISLYEHGINGILADEMGLGKTLQTIS 100
Query: 75 FLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEH 134
L Y+K + P P L++ P S W++E+ ++ P L + +G++E+R + R
Sbjct: 101 LLGYMKHYRNIPSPHLIIAPKSTLMNWMAELERWCPTLRSICLIGDQEKRAAMIR----- 155
Query: 135 VKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR 194
+ P +DV +++Y++V+ ++ + W Y +IDEA R+KN S L ++R
Sbjct: 156 -------DEILPGEWDVCVSSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVR 208
Query: 195 EHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKI 254
E F RLL+TGTP+QNNL ELWAL++F +P VF + + F S F ++S+ + +
Sbjct: 209 E-FKSASRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWF----NTSNCFENDDL 263
Query: 255 KEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-- 306
T L +L F+LRR K + + L P E V +Q++ Y IL K+
Sbjct: 264 ---VTRLHAVLRPFLLRRIKADVEK----RLLPKKETKVYIGLSKMQREWYTKILMKDID 316
Query: 307 ------------LPKLLALSSRTANHQSLQNTA---------------SGKLVVLDLLLK 339
L +L + NH L + A GK+V+LD LL
Sbjct: 317 VVNGAGKSDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDQHLVDNCGKMVLLDKLLP 376
Query: 340 KLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIER 399
KL RVL+F+QMT+ LDIL+D+ + Y+Y RLDG E+R +I F+
Sbjct: 377 KLQEQDSRVLIFSQMTRILDILEDYCYWKNYNYCRLDGQTAHEDRQKSINEFN------- 429
Query: 400 LYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV 459
A + FVFM+STRAGG+G+NL AD V+ ++ DWNPQVD QA+ RAHRIGQ V
Sbjct: 430 ----APNSTKFVFMLSTRAGGLGINLATADVVVLFDSDWNPQVDLQAMDRAHRIGQKKQV 485
Query: 460 LSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
+TE+TVEE I+ RAE KLRL V+
Sbjct: 486 RVFRFLTENTVEERIVERAEMKLRLDSVVI 515
>gi|444321550|ref|XP_004181431.1| hypothetical protein TBLA_0F03770 [Tetrapisispora blattae CBS 6284]
gi|387514475|emb|CCH61912.1| hypothetical protein TBLA_0F03770 [Tetrapisispora blattae CBS 6284]
Length = 1507
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 209/587 (35%), Positives = 313/587 (53%), Gaps = 80/587 (13%)
Query: 23 QTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFS 82
Q + +F EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++F+S+L +S
Sbjct: 382 QKLTEQPDFIHGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIYS 441
Query: 83 QMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMS 142
+ GP LV+ PLS W K+ P L + Y+G + R IR YE Q
Sbjct: 442 RKQQGPHLVVVPLSTMPAWQETFEKWAPGLNCIYYMGNEKSRETIRD--YEFYT-NPQAK 498
Query: 143 NVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRR 202
L F+VLLTTY+ +L DQ L I W + +DEA RLKN S LY L F + R
Sbjct: 499 TKKHLKFNVLLTTYEYILKDQPVLGNIKWQFLAVDEAHRLKNAESSLYEALNS-FKVGNR 557
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT-SL 261
LL+TGTP+QNN+ EL AL++F MP F T++Q + F++ + K +E++ +L
Sbjct: 558 LLITGTPLQNNIKELAALVNFLMPGRF-TIDQEID-FEN---------QDKEQEEYIRNL 606
Query: 262 KGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS 315
L F+LRR K+ + + LP TE ++ +Q Y +IL K L A S
Sbjct: 607 HERLQPFILRRLKKDVEKS----LPSKTERILRVELSDIQTDYYKNILTKNYSALTAGSK 662
Query: 316 --------------RTANHQSLQNTA-------------------------SGKLVVLDL 336
+ +NH L N A SGK+V+LD
Sbjct: 663 GGQFSLLNIMNELKKASNHPYLFNNAEERVLQKFGDGNMSKENILRGLIMSSGKMVLLDK 722
Query: 337 LLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSA 396
LL +L GHRVL+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ +
Sbjct: 723 LLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS 782
Query: 397 IERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQM 456
ND FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ
Sbjct: 783 ----------ND-FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQK 831
Query: 457 NHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVD-REVKERTAVETDDLRSII-F 514
NHV+ LV++ TVEE ++ RA +K+ L + ++ V D +++++ T +L I+ F
Sbjct: 832 NHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKLQKKNEPNTAELSEILKF 891
Query: 515 GL-HLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKF 560
G ++F K N ++ +DL L + E I S G +F
Sbjct: 892 GAGNMFAAKD-NQKKLEDLNLDDVLEHAEDHITTPEIGESHLGGEEF 937
>gi|296826190|ref|XP_002850934.1| chromatin remodelling complex ATPase chain ISW1 [Arthroderma otae
CBS 113480]
gi|238838488|gb|EEQ28150.1| chromatin remodelling complex ATPase chain ISW1 [Arthroderma otae
CBS 113480]
Length = 1113
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 193/543 (35%), Positives = 288/543 (53%), Gaps = 79/543 (14%)
Query: 11 AKIIHDNDERDGQTPV---DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLG 67
A+++ D ++R G+T + F E++ +Q+ GL+WL+ + G++ +L DEMGLG
Sbjct: 163 AELLKD-EKRGGKTETVFQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLG 221
Query: 68 KTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI 127
KTLQ ISFL YL+ GP LV P S D W E K+TP + VL G +++R +
Sbjct: 222 KTLQTISFLGYLRHICGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQL 281
Query: 128 RRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSS 187
+ E + ++ FDV +T+Y+++L ++ L + W Y IIDEA R+KN S
Sbjct: 282 ---INERLVDEK---------FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEES 329
Query: 188 VLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSS 247
L ++R F RLL+TGTP+QNNL ELWAL++F +P VFG F D S+
Sbjct: 330 SLSQIIR-VFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAF-----DQWFSNQ 383
Query: 248 APKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYAS 301
+ + +Q L +L F+LRR K + + L P E+ + +Q K Y
Sbjct: 384 EADQDTVVQQ---LHRVLRPFLLRRVKSDVEKS----LLPKKELNLYVGMSEMQVKWYQK 436
Query: 302 ILRKELPKLLALSS----------------RTANHQSLQNTA---------------SGK 330
IL K++ + + NH L A SGK
Sbjct: 437 ILEKDIDAVNGAQGNRESKTRLVNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIDNSGK 496
Query: 331 LVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRH 390
+V+LD LL +L+ G RVL+F+QM++ LDIL+D+ R + Y R+DGS E+R AI
Sbjct: 497 MVILDKLLSRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDRIQAIDE 556
Query: 391 FSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA 450
++ G++ FVF+++TRAGG+G+NL AD VI ++ DWNPQ D QA+ RA
Sbjct: 557 YN-----------RPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRA 605
Query: 451 HRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLR 510
HRIGQ V+ +TE +EE ++ RA +KLRL V+ ++ K A D+L
Sbjct: 606 HRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQQQAK--NAASKDELL 663
Query: 511 SII 513
S+I
Sbjct: 664 SMI 666
>gi|340710938|ref|XP_003394039.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Bombus terrestris]
Length = 1796
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 202/536 (37%), Positives = 295/536 (55%), Gaps = 75/536 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+W+I + +V+L DEMGLGKT+Q I FL YL + GPFL++ PLS
Sbjct: 446 LRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTHQLYGPFLLVVPLS 505
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W EM+++ P + + Y+G+ R IR + + ++ L F+ +LTTY
Sbjct: 506 TMTSWQREMSQWAPDMNFVTYLGDVTSRNVIREYEWCYSSKR--------LKFNAILTTY 557
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D+ FL + W ++DEA RLKN S+LY L E F RLL+TGTP+QN+L E
Sbjct: 558 EIVLKDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALAE-FHTNHRLLITGTPLQNSLKE 616
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP+ F + +F + H ++A K ++ L L F+LRR K+
Sbjct: 617 LWALLHFIMPTKFNSWEEF-----EKEHDNAAQK------GYSKLHKQLEPFILRRVKKD 665
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRKE---------------------------- 306
+ + + + E+T LQK+ Y IL K
Sbjct: 666 VEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTMTFLNIVIEXKKCCNH 725
Query: 307 --LPKLLALSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
L K + N LQ SGKLV+LD LL +L +GHRVL+F+QM + LDIL
Sbjct: 726 AFLTKPTESERKDNNEDYLQQLIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRMLDILG 785
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
++L+ + + ++RLDGSI+ E R A+ HF+ A G+ F F++STRAGG+G
Sbjct: 786 EYLQKKHFPFQRLDGSIKGELRKQALDHFN-----------AEGSQDFCFLLSTRAGGLG 834
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+++VEE I+ RA++K+
Sbjct: 835 INLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKM 894
Query: 483 RLSHNVV------GDDVVDREV--KERTAVETDDLRSII-FGLH-LFDPKAINNEE 528
L H V+ G V+D++ +DL +I+ FG LF + +EE
Sbjct: 895 VLDHLVIQRMDTTGRTVLDKKXAGTNNNPFNKEDLNAILKFGAEDLFKDEEDGDEE 950
>gi|451854271|gb|EMD67564.1| hypothetical protein COCSADRAFT_290415 [Cochliobolus sativus ND90Pr]
Length = 1390
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 299/593 (50%), Gaps = 98/593 (16%)
Query: 16 DNDERDGQTPVDAAEFG--------------VTAELKPHQVEGLSWLIRRYLLGVNVLLG 61
DN++R G+ D E V LK +Q++GL W+I Y +N +L
Sbjct: 521 DNEDRPGKRKTDYYEIAHRIKEEVTEQATNLVGGTLKEYQLKGLQWMISLYNNNLNGILA 580
Query: 62 DEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGER 121
DEMGLGKT+Q IS ++YL + PGP+LV+ PLS W +E K+ P + + Y G
Sbjct: 581 DEMGLGKTIQTISLITYLIEKKRQPGPYLVIVPLSTLTNWTNEFEKWAPSVSKIVYKGPP 640
Query: 122 EQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ Y+ Q F VLLTTY+ ++ D+ LS+I W + I+DE R
Sbjct: 641 NARKQ-----YQQQIRWGQ--------FQVLLTTYEFIIKDRPILSKIKWVHMIVDEGHR 687
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
+KN S L + +++ RL++TGTP+QNNL+ELWA+++F +P++F + F F
Sbjct: 688 MKNAGSKLSMTITQYYSTRYRLILTGTPLQNNLTELWAMLNFVLPTIFKSATSFDEWFNT 747
Query: 242 AVHSSSAPKRGKIKEQ-----FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE------ 290
++ + ++ E+ L +L F+LRR K+ + + LP TE
Sbjct: 748 PFANTGGQDKMELTEEEQLLVIRRLHKVLRPFLLRRLKRDVEKD----LPDKTERVIKCN 803
Query: 291 ITVLQKKVYASILR----------------KELPKLLALSSRTANH-------QSLQNT- 326
+ LQ K+Y ++ + L +L + NH + + N
Sbjct: 804 FSTLQAKLYKQLVTHNRLMVSDGKGGKTGMRGLSNMLMQLRKLCNHPFVFEEVEDVMNPT 863
Query: 327 ---------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDG 377
++GK +LD +L K +GHRVL+F QMTQ ++I++D+L LR Y RLDG
Sbjct: 864 KGTNDLLWRSAGKFELLDRILPKFQATGHRVLMFFQMTQIMNIMEDYLRLRGMQYLRLDG 923
Query: 378 SIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQD 437
+ +A++R +R F+ A + F F++STRAGG+GLNL ADTVI Y+ D
Sbjct: 924 ATKADDRSDLLRLFN-----------APNSPYFCFLLSTRAGGLGLNLQTADTVIIYDSD 972
Query: 438 WNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDRE 497
WNP D QA RAHRIGQ N V + L+T ++VEE I+ RA KL + V+ D +
Sbjct: 973 WNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVEEKILERANYKLDMDGKVIQAGKFDNK 1032
Query: 498 VKERTAVETDDLRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHE 550
K DD R + + L +A + E +++ LN I MRHE
Sbjct: 1033 SK-------DDERDAMLRIMLESAEAAESLEQEEMDDDDLNQ-----IMMRHE 1073
>gi|302660586|ref|XP_003021971.1| hypothetical protein TRV_03919 [Trichophyton verrucosum HKI 0517]
gi|291185893|gb|EFE41353.1| hypothetical protein TRV_03919 [Trichophyton verrucosum HKI 0517]
Length = 1500
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 277/509 (54%), Gaps = 74/509 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F +LK Q++G+++L ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF
Sbjct: 432 DFIQNGQLKEFQIKGVNFLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPF 491
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
+V+ PLS W +TP + + Y G RR I+ YE + + N+ F
Sbjct: 492 IVIVPLSTMPAWSETFDYWTPDVNYIVYSGPEPARRIIKD--YELLAD----GNLKRPKF 545
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ VL D FL+QI W + IDEA RLKN S LY L + F RLL+TGTP
Sbjct: 546 NVLLTTYEYVLQDASFLNQIKWQFMAIDEAHRLKNRDSQLYTKLLD-FKSSCRLLITGTP 604
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL ALM F P V +++ + +A + + L + +M
Sbjct: 605 VQNNLGELSALMDFLNPGVI-EIDENMDLNSEAASA-----------KLADLTQAIQPYM 652
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL-----------PKLLA 312
LRRTK K+ LPP +E ++ +Q ++Y +IL K P LL
Sbjct: 653 LRRTKSKV----ESELPPKSEKIIRVELSDVQLELYKNILTKNYDALNHGGKGPKPSLLN 708
Query: 313 L-----------------------SSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
+ S+R + T+SGK++VLD LL KL N GHRVL
Sbjct: 709 IMMELKKASNHPFMFWGPEEQAGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVL 768
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + L+IL ++++ R ++Y+RLDG+I A R AI H++ A G+
Sbjct: 769 IFSQMVRMLNILANYMDARGFNYQRLDGTIAAGPRRLAIEHYN-----------APGSTD 817
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ T
Sbjct: 818 FTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDT 877
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREV 498
VEE ++ RA KL L + V D E
Sbjct: 878 VEEEVLERARNKLLLEFITIQRGVTDNEA 906
>gi|281203782|gb|EFA77978.1| myb domain-containing protein [Polysphondylium pallidum PN500]
Length = 2536
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 198/510 (38%), Positives = 276/510 (54%), Gaps = 70/510 (13%)
Query: 25 PVDAAEFGVTAE-------LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS 77
P EF + E L+P+Q++GL+WL + N +LGDEMGLGKT+Q++S +
Sbjct: 420 PSGWKEFTASPEYFKKGRLLRPYQLQGLNWLSFCWYQKRNSILGDEMGLGKTVQSVSIIE 479
Query: 78 YLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKE 137
L+ +Q GPFL + PL+ W E +T + +VL Y + R IR + +
Sbjct: 480 TLRKTQGIRGPFLCVAPLTTIPHWKREFESWTDQ-KVLVYHDHGQARPIIRDYEFYYTDS 538
Query: 138 QSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHF 197
+ + +NV+ F+ L+TTY++V+ D+ LS+I W Y +IDEA RLKN S L N LR +
Sbjct: 539 KGRTTNVTK--FNTLITTYEMVISDRAQLSKIHWRYLVIDEAHRLKNKSCKLTNELRT-Y 595
Query: 198 LMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ 257
LL+TGTP+QNN ELW+L++F P F L +FL F D K EQ
Sbjct: 596 KYDHLLLLTGTPLQNNTQELWSLLNFMEPEKFAHLEEFLEEFGDL----------KQAEQ 645
Query: 258 FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEI--TVLQKKVYASILRKEL-------- 307
T L+ +L ++LRR K+ + + + E+ T +QKK Y +I K
Sbjct: 646 VTKLQEVLRPYLLRRMKENVEKSIAPKEETIVEVELTTIQKKYYRAIYEKNFTFLRKGGK 705
Query: 308 ---PKLLALS---SRTANHQSL-------------QNT---------ASGKLVVLDLLLK 339
P LL + + NH L +N+ ASGKLV++D LL
Sbjct: 706 GNGPSLLNIMMELRKCCNHPYLIKGAEDSETSMLMKNSDAIYHKLIQASGKLVLIDKLLP 765
Query: 340 KLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIER 399
KL H+VL+F+QM LDIL D+L R Y +ER+DGSI+AE+R AAI FS
Sbjct: 766 KLKAGNHKVLIFSQMVSVLDILDDYLTFRGYLHERIDGSIKAEDRQAAIDRFS------- 818
Query: 400 LYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV 459
A +D FVF++ TRAGG+G+NL AADTVI ++ DWNPQ D QA R HRIGQ V
Sbjct: 819 ----APDSDRFVFLLCTRAGGMGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMV 874
Query: 460 LSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
LVT +T E ++ RA +KL L V+
Sbjct: 875 KVYRLVTRNTYERIMFDRASKKLGLDRAVL 904
>gi|242025432|ref|XP_002433128.1| helicase, putative [Pediculus humanus corporis]
gi|212518669|gb|EEB20390.1| helicase, putative [Pediculus humanus corporis]
Length = 942
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 176/456 (38%), Positives = 254/456 (55%), Gaps = 69/456 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
E+K +Q+ GL+W+I Y +N +L DEMGLGKTLQ IS L Y+K + PGP +V+
Sbjct: 130 NGEMKDYQIRGLNWMISLYENDINGILADEMGLGKTLQTISLLGYMKHYRQIPGPHMVIV 189
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W+ E K+ P ++ + +G+ E R R + + P +DV +
Sbjct: 190 PKSTLANWMIEFKKWCPSIKAICLIGDAEARNTFIRDV------------LLPGAWDVCV 237
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++V+ ++G +I W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNN
Sbjct: 238 TSYEMVIKERGVFKKINWRYMVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLTGTPLQNN 296
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + + F S F ++++ + E+ L +L F+LRR
Sbjct: 297 LHELWALLNFLLPDVFNSSDDFDSWF----NTNTFMGDNALIER---LHAVLRPFLLRR- 348
Query: 274 KQKLVECGHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRTANHQSLQNTASGKLVV 333
L+ E+ K L AN GK+V+
Sbjct: 349 -----------------------------LKSEVEKKLKPKKEVAN--------CGKMVI 371
Query: 334 LDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSV 393
LD LL +L + RVL+F+QMT+ LDIL+D+ + Y Y RLDG+ E+R I ++
Sbjct: 372 LDKLLPRLQDQDSRVLIFSQMTRMLDILEDYCFWKGYKYCRLDGNTSHEDRQRQINEYN- 430
Query: 394 QSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRI 453
A ++ F+FM+STRAGG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRI
Sbjct: 431 ----------APNSEKFIFMLSTRAGGLGINLATADVVILYDSDWNPQMDLQAMDRAHRI 480
Query: 454 GQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
GQ+ V L+TE+TVEE I+ RAE KLRL V+
Sbjct: 481 GQLKEVRVFRLITENTVEEKIVERAEVKLRLDKLVI 516
>gi|196008026|ref|XP_002113879.1| hypothetical protein TRIADDRAFT_27056 [Trichoplax adhaerens]
gi|190584283|gb|EDV24353.1| hypothetical protein TRIADDRAFT_27056, partial [Trichoplax
adhaerens]
Length = 871
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 200/543 (36%), Positives = 282/543 (51%), Gaps = 84/543 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L +Q+EGL+WL + + +L DEMGLGKT+QAISFL+ L GPFL+ PLS
Sbjct: 259 LHAYQLEGLNWLRFSWAEETDTILADEMGLGKTIQAISFLNSLFMENHCKGPFLISVPLS 318
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSN--VSP-----LPF 149
W E + P L V+ YVG+++ R+ IR + ++ N V P L F
Sbjct: 319 TVVNWEREFEMWAPNLYVVSYVGDKDCRKVIREHEFYRDEQSDSKGNKAVKPKKKSFLKF 378
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
VLLT+Y+++ +D L I W I+DEA RLKN S + VL + + +LL+TGTP
Sbjct: 379 HVLLTSYELITIDAPILQSIDWKVLIVDEAHRLKNNQSKFFRVLSS-YKLGYKLLLTGTP 437
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL ELW L++F P F + F F+D ++Q L +L +
Sbjct: 438 LQNNLEELWNLLNFLSPDRFNSWQDFSMKFEDISK----------EDQIKKLNELLGPHL 487
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSL 323
LRR K +++ +P +E+ V +QK Y IL + AL+SR H SL
Sbjct: 488 LRRMKADVMK----GIPEKSEVIVRIDLTSMQKTYYKYILTRNFE---ALNSRGNKHVSL 540
Query: 324 QNT------------------------------------ASGKLVVLDLLLKKLYNSGHR 347
N A GKL+VL+ +LKKL +G+R
Sbjct: 541 SNIVMELKKCCNHPYLIPSASEDAPTNIDGTYHLSPLVQACGKLIVLEKMLKKLKETGNR 600
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QMT+ LDIL+DFL+ Y YER+DGS ER A I F+ +A +
Sbjct: 601 VLIFSQMTKMLDILEDFLDGLNYEYERIDGSTSGNERQALIDKFNAPNATQ--------- 651
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 652 --FCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQSNKVMIYRFVTR 709
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNE 527
+VEE I + A++K+ L+H +V + + T E DD+ + FG + N+E
Sbjct: 710 FSVEERITQVAKKKMMLTHLIVRPGLGSSQSGALTKQELDDI--LKFGTK----ELFNDE 763
Query: 528 ESD 530
+S+
Sbjct: 764 DSE 766
>gi|164448642|ref|NP_001106734.1| chromodomain-helicase-DNA-binding protein 1 [Bombyx mori]
gi|269969346|sp|A9X4T1.1|CHD1_BOMMO RecName: Full=Chromodomain-helicase-DNA-binding protein 1;
Short=CHD-1; AltName: Full=ATP-dependent helicase CHD1
gi|89213694|gb|ABD64154.1| CHD1 [Bombyx mori]
Length = 1365
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/489 (39%), Positives = 272/489 (55%), Gaps = 66/489 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+WLI + +V+L DEMGLGKT+Q I FL YL SQ GPFL + PLS
Sbjct: 205 LRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQHLYGPFLCVVPLS 264
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E ++ P + V+ Y+G+ R IR+ + S+ L F+ +LTTY
Sbjct: 265 TMTAWQREFQQWAPDINVVTYIGDVSSRDIIRQFEW-------SFSSSKRLKFNAILTTY 317
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+++L D+ FL W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L E
Sbjct: 318 EILLKDRQFLRSFSWACLLVDEAHRLKNDDSLLYKALKE-FDTNHRLLVTGTPLQNSLKE 376
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP F + F +DA + L L F+LRR K+
Sbjct: 377 LWALLHFIMPYKFESWEDFEKDHEDAATKG-----------YEKLHKQLEPFILRRQKKD 425
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRK---------------------ELPKLL-- 311
+ + + + E+T +QK+ Y IL K EL K
Sbjct: 426 VEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSALRKGVKGSINTFINIVIELKKCCNH 485
Query: 312 ALSSRTANHQSLQNTA-----------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
AL ++ + +S + A SGKL++LD LL +L +GHRVL+F+QM + LDI
Sbjct: 486 ALLTKPEDFESRASLATSDAVEKLLRGSGKLLLLDKLLCRLKETGHRVLIFSQMVRMLDI 545
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L ++L+ R + ++RLDGSI+ E R A+ HF+ A G+ F F++STRAGG
Sbjct: 546 LAEYLQRRHFPFQRLDGSIKGELRKQALDHFN-----------AEGSQDFCFLLSTRAGG 594
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA+R
Sbjct: 595 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKR 654
Query: 481 KLRLSHNVV 489
K+ L H V+
Sbjct: 655 KMVLDHLVI 663
>gi|254586715|ref|XP_002498925.1| ZYRO0G21780p [Zygosaccharomyces rouxii]
gi|238941819|emb|CAR29992.1| ZYRO0G21780p [Zygosaccharomyces rouxii]
Length = 1094
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 180/496 (36%), Positives = 270/496 (54%), Gaps = 75/496 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V L+ +Q++GL+WLI + G+ +L DEMGLGKTLQ I+FL YL++ + PGPF ++
Sbjct: 133 VKGSLRSYQIQGLNWLISLHTNGLAGILADEMGLGKTLQTIAFLGYLRYIEKVPGPFFII 192
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP--FD 150
P S + W+ E+ +TP+ G +E+R S++ N L FD
Sbjct: 193 APKSTLNNWIREINHWTPEFNAFIMQGTKEER--------------SELVNKRLLACDFD 238
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
+++ +Y++ + ++ ++ W Y IIDEA R+KN S+L VLRE F RLL+TGTP+
Sbjct: 239 IVVASYEITIREKSSFKKMDWQYVIIDEAHRIKNEESMLSQVLRE-FSSRNRLLITGTPL 297
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL ELWAL++F +P +F F F + + + +K+ L +L F+L
Sbjct: 298 QNNLHELWALLNFLLPDIFSNSEDFDEWF--SSEGTEEDQENIVKQ----LHTVLHPFLL 351
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS--------- 315
RR K + + L P E+ V +QK Y IL K+L + A
Sbjct: 352 RRIKSDVEKS----LLPKKELNVYVGMSTMQKTWYKQILEKDLDAVNASGGQKESKTRLL 407
Query: 316 -------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L + A S KL VLD LL+K+ G RVL+F+Q
Sbjct: 408 NIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNSAKLKVLDKLLRKMKEQGSRVLIFSQ 467
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ LR+Y Y R+DGS E+R +I ++ + + F+F+
Sbjct: 468 MSRLLDILEDYCFLREYDYCRIDGSTDHEDRIRSIDEYNRPDS-----------NKFLFL 516
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V VT+++VE+
Sbjct: 517 LTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTDNSVEDK 576
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA +KLRL V+
Sbjct: 577 ILERATQKLRLDQLVI 592
>gi|401842508|gb|EJT44686.1| ISW1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1069
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/520 (37%), Positives = 281/520 (54%), Gaps = 75/520 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V L+P+QV+G++WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 132 VDGRLRPYQVQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVI 191
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP + G++E R + Q ++ FDV+
Sbjct: 192 APKSTLNNWLREINRWTPDVNAFILQGDKEGRAELI---------QKKLLGCD---FDVV 239
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 240 VASYEIIIREKSPLKKIDWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 298
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + I Q L +L F+LRR
Sbjct: 299 NLHELWALLNFLLPDIFSDAQDFDDWFS---SESTEEDQDNIVRQ---LHTVLQPFLLRR 352
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K VE L P E+ + +QK+ Y IL K+L +LL +
Sbjct: 353 IKSD-VETSLL---PKKELNLYVGMSNMQKRWYKKILEKDLDAVNGSNGGKESKTRLLNI 408
Query: 314 S---SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQ 353
+ NH L + A G D L +YN+ G RVL+F+Q
Sbjct: 409 MMQLRKCCNHPYLFDGAEPGPPYTTDEHL--IYNAAKLLVLDKLLKKLKEEGSRVLIFSQ 466
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ RKY Y R+DGS E+R AI ++ + + FVF+
Sbjct: 467 MSRVLDILEDYCFFRKYDYCRIDGSTAHEDRIQAIDDYNEPDS-----------EKFVFL 515
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE
Sbjct: 516 LTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEK 575
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
I+ RA +KLRL V+ + + KE A D L S+I
Sbjct: 576 ILERATQKLRLDQLVIQQNRTSSKKKENKADSKDALLSMI 615
>gi|238498532|ref|XP_002380501.1| chromodomain helicase (Chd1), putative [Aspergillus flavus
NRRL3357]
gi|220693775|gb|EED50120.1| chromodomain helicase (Chd1), putative [Aspergillus flavus
NRRL3357]
Length = 1446
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 198/513 (38%), Positives = 272/513 (53%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ NV+L DEMGLGKT+Q +SF+++L+ + GPF+
Sbjct: 441 FLRNGELKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVSFINWLRHVRRQQGPFV 500
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL--P 148
V+ PLS W +TP L + Y G R +R E M + +P
Sbjct: 501 VVVPLSTMPSWAETFDNWTPDLNYVVYNGNEAARTVLR--------EHELMIDGNPRRPK 552
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL+D FLSQ W + IDEA RLKN S LY L E F P RLL+TGT
Sbjct: 553 FNVLLTTYEYVLLDSSFLSQFKWQFMAIDEAHRLKNRESQLYAKLLE-FRSPARLLITGT 611
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL AL+ F P + DA +A ++ L + F
Sbjct: 612 PIQNNLAELSALLDFLNPGLVDI---------DADMDLNAE---AASQKLAELTKAIQPF 659
Query: 269 MLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKEL--------------- 307
MLRRTK K VE LPP E++ +Q + Y +IL K
Sbjct: 660 MLRRTKSK-VESD---LPPKVEKIIRVELSDVQLEYYKNILTKNYAALNDGAKGQKQSLL 715
Query: 308 --------------------PKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
K+L S+R + T+SGK+++LD LL KL GHR
Sbjct: 716 NIMMELKKASNHPFMFPNAEAKILDGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHR 775
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LD+L +++E R Y+Y+RLDG+I A R AI H++ A G+
Sbjct: 776 VLIFSQMVKMLDLLGEYMEFRGYTYQRLDGTIPAASRRLAIEHYN-----------APGS 824
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 825 SDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 884
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 885 DTVEEEVIERARNKLLLEFITIQRGVTDKEASE 917
>gi|327308272|ref|XP_003238827.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892]
gi|326459083|gb|EGD84536.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892]
Length = 1113
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/543 (35%), Positives = 291/543 (53%), Gaps = 79/543 (14%)
Query: 11 AKIIHDNDERDGQTPV---DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLG 67
A+++ D ++R G+T + F E++ +Q+ GL+WL+ + G++ +L DEMGLG
Sbjct: 163 AELLKD-EKRGGKTETVFQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLG 221
Query: 68 KTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI 127
KTLQ ISFL YL+ GP LV P S D W E K+TP + VL G +++R +
Sbjct: 222 KTLQTISFLGYLRHICGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQL 281
Query: 128 RRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSS 187
+ E + ++ FDV +T+Y+++L ++ L + W Y IIDEA R+KN S
Sbjct: 282 ---INERLVDEK---------FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEES 329
Query: 188 VLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSS 247
L ++R F RLL+TGTP+QNNL ELWAL++F +P VFG F D S+
Sbjct: 330 SLSQIIR-VFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAF-----DQWFSNQ 383
Query: 248 APKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYAS 301
+ + +Q L +L F+LRR K + + L P E+ + +Q K Y
Sbjct: 384 EADQDTVVQQ---LHRVLRPFLLRRVKSDVEKS----LLPKKELNLYVGMSEMQVKWYQK 436
Query: 302 ILRKEL-------------PKLLALS---SRTANHQSLQNTA---------------SGK 330
IL K++ +LL + + NH L A SGK
Sbjct: 437 ILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIDNSGK 496
Query: 331 LVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRH 390
+V+LD LL +L+ G RVL+F+QM++ LDIL+D+ R + Y R+DGS E+R AI
Sbjct: 497 MVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDRIQAIDE 556
Query: 391 FSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA 450
++ G++ FVF+++TRAGG+G+NL AD VI ++ DWNPQ D QA+ RA
Sbjct: 557 YN-----------RPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRA 605
Query: 451 HRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLR 510
HRIGQ V+ +TE +EE ++ RA +KLRL V+ ++ K A D+L
Sbjct: 606 HRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQQQAK--NAASKDELL 663
Query: 511 SII 513
S+I
Sbjct: 664 SMI 666
>gi|195124269|ref|XP_002006616.1| GI18484 [Drosophila mojavensis]
gi|193911684|gb|EDW10551.1| GI18484 [Drosophila mojavensis]
Length = 603
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 183/504 (36%), Positives = 277/504 (54%), Gaps = 67/504 (13%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F V +L+ +Q+ GL+WLI Y G+N +L DEMGLGKTLQ IS L Y++ + GP L
Sbjct: 35 FIVNGKLRDYQLRGLNWLILLYENGINGILADEMGLGKTLQTISLLGYIRNVKHQAGPHL 94
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ P S W++E + P L+V+ ++G+++ R+ I+ M ++ K + +D
Sbjct: 95 VVAPKSTLANWMNEFEHWCPSLKVICFIGDKKTRKTIKAKMPKNEK----------VKWD 144
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
V +T+YD+ L ++ FL W Y +IDE R+KN ++++ +RE F RLL+TGTP+
Sbjct: 145 VCVTSYDMCLRERSFLKSFSWQYLVIDEGHRIKNENALISGKVRE-FHSTNRLLLTGTPL 203
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL ELWAL++F +P VF + F F G+ L ++ F+L
Sbjct: 204 QNNLHELWALLNFLLPDVFNSSEDFDEWFNTNSCLGDDVLVGR-------LHAVIKPFLL 256
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS--------- 315
RR K + VE L P E+ + +Q++ Y +L ++ + +
Sbjct: 257 RRLKSE-VEAN---LLPKKEVNIYVGLSRMQREWYRKLLLNDIDVMTCYGTISKMRVMNI 312
Query: 316 -----RTANH-------QSLQNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH + L T SGK+++LD LL KL G RVL+F+QMT+
Sbjct: 313 IMQLRKCVNHPYLFEGVEELPYTTDSNLLKNSGKMLILDKLLMKLQEQGSRVLIFSQMTR 372
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ RK+ Y RLDG E+R IR ++++++ + F+FM+ST
Sbjct: 373 MLDILEDYCNWRKFDYCRLDGQTPHEDRDKLIREYNMENSPK-----------FIFMLST 421
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+ E TV+E I+
Sbjct: 422 RAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLIAEKTVDEKILE 481
Query: 477 RAERKLRLSHNVVGDDVVDREVKE 500
A KLRL V+ + V ++ K+
Sbjct: 482 HANIKLRLDRKVIQNGVNNQPDKQ 505
>gi|317155731|ref|XP_001825326.2| chromodomain helicase (Chd1) [Aspergillus oryzae RIB40]
Length = 1513
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 198/513 (38%), Positives = 272/513 (53%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ NV+L DEMGLGKT+Q +SF+++L+ + GPF+
Sbjct: 441 FLRNGELKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVSFINWLRHVRRQQGPFV 500
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL--P 148
V+ PLS W +TP L + Y G R +R E M + +P
Sbjct: 501 VVVPLSTMPSWAETFDNWTPDLNYVVYNGNEAARTVLR--------EHELMIDGNPRRPK 552
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL+D FLSQ W + IDEA RLKN S LY L E F P RLL+TGT
Sbjct: 553 FNVLLTTYEYVLLDSSFLSQFKWQFMAIDEAHRLKNRESQLYAKLLE-FRSPARLLITGT 611
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL AL+ F P + DA +A ++ L + F
Sbjct: 612 PIQNNLAELSALLDFLNPGLVDI---------DADMDLNAE---AASQKLAELTKAIQPF 659
Query: 269 MLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKEL--------------- 307
MLRRTK K VE LPP E++ +Q + Y +IL K
Sbjct: 660 MLRRTKSK-VESD---LPPKVEKIIRVELSDVQLEYYKNILTKNYAALNDGAKGQKQSLL 715
Query: 308 --------------------PKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
K+L S+R + T+SGK+++LD LL KL GHR
Sbjct: 716 NIMMELKKASNHPFMFPNAEAKILDGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHR 775
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LD+L +++E R Y+Y+RLDG+I A R AI H++ A G+
Sbjct: 776 VLIFSQMVKMLDLLGEYMEFRGYTYQRLDGTIPAASRRLAIEHYN-----------APGS 824
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 825 SDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 884
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 885 DTVEEEVIERARNKLLLEFITIQRGVTDKEASE 917
>gi|83774068|dbj|BAE64193.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1471
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 198/513 (38%), Positives = 272/513 (53%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ NV+L DEMGLGKT+Q +SF+++L+ + GPF+
Sbjct: 399 FLRNGELKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVSFINWLRHVRRQQGPFV 458
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL--P 148
V+ PLS W +TP L + Y G R +R E M + +P
Sbjct: 459 VVVPLSTMPSWAETFDNWTPDLNYVVYNGNEAARTVLR--------EHELMIDGNPRRPK 510
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL+D FLSQ W + IDEA RLKN S LY L E F P RLL+TGT
Sbjct: 511 FNVLLTTYEYVLLDSSFLSQFKWQFMAIDEAHRLKNRESQLYAKLLE-FRSPARLLITGT 569
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL AL+ F P + DA +A ++ L + F
Sbjct: 570 PIQNNLAELSALLDFLNPGLVDI---------DADMDLNAE---AASQKLAELTKAIQPF 617
Query: 269 MLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKEL--------------- 307
MLRRTK K VE LPP E++ +Q + Y +IL K
Sbjct: 618 MLRRTKSK-VESD---LPPKVEKIIRVELSDVQLEYYKNILTKNYAALNDGAKGQKQSLL 673
Query: 308 --------------------PKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
K+L S+R + T+SGK+++LD LL KL GHR
Sbjct: 674 NIMMELKKASNHPFMFPNAEAKILDGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHR 733
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LD+L +++E R Y+Y+RLDG+I A R AI H++ A G+
Sbjct: 734 VLIFSQMVKMLDLLGEYMEFRGYTYQRLDGTIPAASRRLAIEHYN-----------APGS 782
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 783 SDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 842
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 843 DTVEEEVIERARNKLLLEFITIQRGVTDKEASE 875
>gi|391865405|gb|EIT74689.1| chromodomain-helicase DNA-binding protein [Aspergillus oryzae
3.042]
Length = 1519
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 198/513 (38%), Positives = 272/513 (53%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ NV+L DEMGLGKT+Q +SF+++L+ + GPF+
Sbjct: 447 FLRNGELKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVSFINWLRHVRRQQGPFV 506
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL--P 148
V+ PLS W +TP L + Y G R +R E M + +P
Sbjct: 507 VVVPLSTMPSWAETFDNWTPDLNYVVYNGNEAARTVLR--------EHELMIDGNPRRPK 558
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL+D FLSQ W + IDEA RLKN S LY L E F P RLL+TGT
Sbjct: 559 FNVLLTTYEYVLLDSSFLSQFKWQFMAIDEAHRLKNRESQLYAKLLE-FRSPARLLITGT 617
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL AL+ F P + DA +A ++ L + F
Sbjct: 618 PIQNNLAELSALLDFLNPGLVDI---------DADMDLNAE---AASQKLAELTKAIQPF 665
Query: 269 MLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKEL--------------- 307
MLRRTK K VE LPP E++ +Q + Y +IL K
Sbjct: 666 MLRRTKSK-VESD---LPPKVEKIIRVELSDVQLEYYKNILTKNYAALNDGAKGQKQSLL 721
Query: 308 --------------------PKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
K+L S+R + T+SGK+++LD LL KL GHR
Sbjct: 722 NIMMELKKASNHPFMFPNAEAKILDGSTRREDVLRAMITSSGKMMLLDQLLAKLKRDGHR 781
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LD+L +++E R Y+Y+RLDG+I A R AI H++ A G+
Sbjct: 782 VLIFSQMVKMLDLLGEYMEFRGYTYQRLDGTIPAASRRLAIEHYN-----------APGS 830
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 831 SDFAFILSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 890
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 891 DTVEEEVIERARNKLLLEFITIQRGVTDKEASE 923
>gi|315054985|ref|XP_003176867.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum
CBS 118893]
gi|311338713|gb|EFQ97915.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum
CBS 118893]
Length = 1114
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/543 (35%), Positives = 291/543 (53%), Gaps = 79/543 (14%)
Query: 11 AKIIHDNDERDGQTPV---DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLG 67
A+++ D ++R G+T + F E++ +Q+ GL+WL+ + G++ +L DEMGLG
Sbjct: 163 AELLKD-EKRGGKTETVFQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLG 221
Query: 68 KTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI 127
KTLQ ISFL YL+ GP LV P S D W E K+TP + VL G +++R +
Sbjct: 222 KTLQTISFLGYLRHICGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQL 281
Query: 128 RRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSS 187
+ E + ++ FDV +T+Y+++L ++ L + W Y IIDEA R+KN S
Sbjct: 282 ---INERLVDEK---------FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEES 329
Query: 188 VLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSS 247
L ++R F RLL+TGTP+QNNL ELWAL++F +P VFG F D S+
Sbjct: 330 SLSQIIR-VFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAF-----DQWFSNQ 383
Query: 248 APKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYAS 301
+ + +Q L +L F+LRR K + + L P E+ + +Q K Y
Sbjct: 384 EADQDTVVQQ---LHRVLRPFLLRRVKSDVEKS----LLPKKELNLYVGMSEMQVKWYQK 436
Query: 302 ILRKEL-------------PKLLALS---SRTANHQSLQNTA---------------SGK 330
IL K++ +LL + + NH L A SGK
Sbjct: 437 ILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIDNSGK 496
Query: 331 LVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRH 390
+V+LD LL +L+ G RVL+F+QM++ LDIL+D+ R + Y R+DGS E+R AI
Sbjct: 497 MVILDKLLTRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDRIQAIDE 556
Query: 391 FSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA 450
++ G++ FVF+++TRAGG+G+NL AD VI ++ DWNPQ D QA+ RA
Sbjct: 557 YN-----------RPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRA 605
Query: 451 HRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLR 510
HRIGQ V+ +TE +EE ++ RA +KLRL V+ ++ K A D+L
Sbjct: 606 HRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQQQAK--NAASKDELL 663
Query: 511 SII 513
S+I
Sbjct: 664 SMI 666
>gi|327299934|ref|XP_003234660.1| chromodomain helicase [Trichophyton rubrum CBS 118892]
gi|326463554|gb|EGD89007.1| chromodomain helicase [Trichophyton rubrum CBS 118892]
Length = 1558
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 277/509 (54%), Gaps = 74/509 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F +LK Q++G+++L ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF
Sbjct: 494 DFIQNGQLKEFQIKGVNFLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPF 553
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
+V+ PLS W +TP + + Y G RR I+ YE + + N+ F
Sbjct: 554 IVIVPLSTMPAWSETFDYWTPDVNYIVYSGPEPARRIIKD--YELLAD----GNLKRPKF 607
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ VL D FL+QI W + IDEA RLKN S LY L + F RLL+TGTP
Sbjct: 608 NVLLTTYEYVLQDASFLNQIKWQFMAIDEAHRLKNRDSQLYTKLLD-FKSSCRLLITGTP 666
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL ALM F P V +++ + +A + + L + +M
Sbjct: 667 VQNNLGELSALMDFLNPGVI-EIDENMDLNSEAASA-----------KLADLTQAIQPYM 714
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL-----------PKLLA 312
LRRTK K+ LPP +E ++ +Q ++Y +IL K P LL
Sbjct: 715 LRRTKSKV----ESELPPKSEKIIRVELSDVQLELYKNILTKNYDALNHGGKGPKPSLLN 770
Query: 313 L-----------------------SSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
+ S+R + T+SGK++VLD LL KL N GHRVL
Sbjct: 771 IMMELKKASNHPFMFWGPEEQAGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVL 830
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + L+IL ++++ R ++Y+RLDG+I A R AI H++ A G+
Sbjct: 831 IFSQMVRMLNILANYMDARGFNYQRLDGTIAAGPRRLAIEHYN-----------APGSTD 879
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ T
Sbjct: 880 FTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDT 939
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREV 498
VEE ++ RA KL L + V D E
Sbjct: 940 VEEEVLERARNKLLLEFITIQRGVTDNEA 968
>gi|302496981|ref|XP_003010491.1| hypothetical protein ARB_03192 [Arthroderma benhamiae CBS 112371]
gi|291174034|gb|EFE29851.1| hypothetical protein ARB_03192 [Arthroderma benhamiae CBS 112371]
Length = 1504
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 277/509 (54%), Gaps = 74/509 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F +LK Q++G+++L ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF
Sbjct: 432 DFIQNGQLKEFQIKGVNFLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPF 491
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
+V+ PLS W +TP + + Y G RR I+ YE + + N+ F
Sbjct: 492 IVIVPLSTMPAWSETFDYWTPDVNYIVYSGPEPARRIIKD--YELLAD----GNLKRPKF 545
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ VL D FL+QI W + IDEA RLKN S LY L + F RLL+TGTP
Sbjct: 546 NVLLTTYEYVLQDASFLNQIKWQFMAIDEAHRLKNRDSQLYTKLLD-FKSSCRLLITGTP 604
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL ALM F P V +++ + +A + + L + +M
Sbjct: 605 VQNNLGELSALMDFLNPGVI-EIDENMDLNSEAASA-----------KLADLTQAIQPYM 652
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL-----------PKLLA 312
LRRTK K+ LPP +E ++ +Q ++Y +IL K P LL
Sbjct: 653 LRRTKSKV----ESELPPKSEKIIRVELSDVQLELYKNILTKNYDALNHGGKGPKPSLLN 708
Query: 313 L-----------------------SSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
+ S+R + T+SGK++VLD LL KL N GHRVL
Sbjct: 709 IMMELKKASNHPFMFWGPEEQAGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVL 768
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + L+IL ++++ R ++Y+RLDG+I A R AI H++ A G+
Sbjct: 769 IFSQMVRMLNILANYMDARGFNYQRLDGTIAAGPRRLAIEHYN-----------APGSTD 817
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ T
Sbjct: 818 FTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDT 877
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREV 498
VEE ++ RA KL L + V D E
Sbjct: 878 VEEEVLERARNKLLLEFITIQRGVTDNEA 906
>gi|389640599|ref|XP_003717932.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
70-15]
gi|351640485|gb|EHA48348.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
70-15]
gi|440471071|gb|ELQ40108.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
Y34]
gi|440481393|gb|ELQ61986.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
P131]
Length = 1128
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 183/493 (37%), Positives = 268/493 (54%), Gaps = 71/493 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ ++ +Q+ GL+WLI + G++ +L DEMGLGKTLQ ISFL YL+ GP LV+
Sbjct: 182 IQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHIMGITGPHLVI 241
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E K+TP++ VL G +E+R + + E + ++S FDV
Sbjct: 242 VPKSTLDNWKREFGKWTPEVNVLVLQGAKEERAAL---IAERLVDES---------FDVC 289
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+++L ++ L + W Y IIDEA R+KN S L V+R F RLL+TGTP+QN
Sbjct: 290 ITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIR-LFNSRNRLLITGTPLQN 348
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
N+ ELWAL++F +P VFG F D S + +Q L +L F+LRR
Sbjct: 349 NIHELWALLNFLLPDVFGDSEAF-----DQWFSGEGQDSDTVVQQ---LHRVLRPFLLRR 400
Query: 273 TKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKELPKLLALSS------------ 315
K + + +LP ++T +Q+ Y IL K++ + +
Sbjct: 401 VKADVEKS---LLPKKEVNLYLKMTEMQRTWYQKILEKDIDAVNGANGKRESKTRLLNIV 457
Query: 316 ----RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH L A SGK+VVLD LLK+L G RVL+F+QM++
Sbjct: 458 MQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNSGKMVVLDKLLKRLKAQGSRVLIFSQMSR 517
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R+Y Y R+DG E+R AAI ++ G++ FVF+++T
Sbjct: 518 VLDILEDYCVFREYKYSRIDGGTAHEDRIAAIDEYN-----------KPGSEKFVFLLTT 566
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL AD VI ++ DWNPQ D QA+ RAHRIGQ V + ++T+EE ++
Sbjct: 567 RAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVYVYRFLVDNTIEEKVLE 626
Query: 477 RAERKLRLSHNVV 489
RA +KL L V+
Sbjct: 627 RAAQKLHLDRLVI 639
>gi|302504248|ref|XP_003014083.1| hypothetical protein ARB_07803 [Arthroderma benhamiae CBS 112371]
gi|291177650|gb|EFE33443.1| hypothetical protein ARB_07803 [Arthroderma benhamiae CBS 112371]
Length = 1128
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 195/543 (35%), Positives = 291/543 (53%), Gaps = 79/543 (14%)
Query: 11 AKIIHDNDERDGQTPV---DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLG 67
A+++ D ++R G+T + F E++ +Q+ GL+WL+ + G++ +L DEMGLG
Sbjct: 154 AELLKD-EKRGGKTETVFQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLG 212
Query: 68 KTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI 127
KTLQ ISFL YL+ GP LV P S D W E K+TP + VL G +++R +
Sbjct: 213 KTLQTISFLGYLRHICGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQL 272
Query: 128 RRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSS 187
+ E + ++ FDV +T+Y+++L ++ L + W Y IIDEA R+KN S
Sbjct: 273 ---INERLVDEK---------FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEES 320
Query: 188 VLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSS 247
L ++R F RLL+TGTP+QNNL ELWAL++F +P VFG F D S+
Sbjct: 321 SLSQIIR-VFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAF-----DQWFSNQ 374
Query: 248 APKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYAS 301
+ + +Q L +L F+LRR K + + L P E+ + +Q K Y
Sbjct: 375 EADQDTVVQQ---LHRVLRPFLLRRVKSDVEKS----LLPKKELNLYVGMSEMQVKWYQK 427
Query: 302 ILRKEL-------------PKLLALS---SRTANHQSLQNTA---------------SGK 330
IL K++ +LL + + NH L A SGK
Sbjct: 428 ILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIDNSGK 487
Query: 331 LVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRH 390
+V+LD LL +L+ G RVL+F+QM++ LDIL+D+ R + Y R+DGS E+R AI
Sbjct: 488 MVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDRIQAIDE 547
Query: 391 FSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA 450
++ G++ FVF+++TRAGG+G+NL AD VI ++ DWNPQ D QA+ RA
Sbjct: 548 YN-----------RPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRA 596
Query: 451 HRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLR 510
HRIGQ V+ +TE +EE ++ RA +KLRL V+ ++ K A D+L
Sbjct: 597 HRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQQQAK--NAASKDELL 654
Query: 511 SII 513
S+I
Sbjct: 655 SMI 657
>gi|315053040|ref|XP_003175894.1| chromodomain helicase hrp3 [Arthroderma gypseum CBS 118893]
gi|311341209|gb|EFR00412.1| chromodomain helicase hrp3 [Arthroderma gypseum CBS 118893]
Length = 1559
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 277/509 (54%), Gaps = 74/509 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F +LK Q++G+++L ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF
Sbjct: 494 DFIQNGQLKEFQIKGVNFLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPF 553
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
+V+ PLS W +TP + + Y G RR I+ YE + + N+ F
Sbjct: 554 IVIVPLSTMPAWSETFDYWTPDVNYIVYSGPEPARRIIKD--YELLTD----GNLKRPKF 607
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ VL D FL+QI W + IDEA RLKN S LY L + F RLL+TGTP
Sbjct: 608 NVLLTTYEYVLQDASFLNQIKWQFMAIDEAHRLKNRDSQLYTKLLD-FKSSCRLLITGTP 666
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL ALM F P V +++ + +A + + L + +M
Sbjct: 667 VQNNLGELSALMDFLNPGVI-EIDENMDLNSEAASA-----------KLADLTQAIQPYM 714
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL-----------PKLLA 312
LRRTK K+ LPP +E ++ +Q ++Y +IL K P LL
Sbjct: 715 LRRTKSKV----ESELPPKSEKIIRVELSDVQLELYKNILTKNYDALNHGGKGPKPSLLN 770
Query: 313 L-----------------------SSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
+ S+R + T+SGK++VLD LL KL N GHRVL
Sbjct: 771 IMMELKKASNHPFMFWGPEDQAGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVL 830
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + L+IL ++++ R ++Y+RLDG+I A R AI H++ A G+
Sbjct: 831 IFSQMVRMLNILANYMDARGFNYQRLDGTIAAGPRRLAIEHYN-----------APGSTD 879
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ T
Sbjct: 880 FTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDT 939
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREV 498
VEE ++ RA KL L + V D E
Sbjct: 940 VEEEVLERARNKLLLEFITIQRGVTDNEA 968
>gi|195380475|ref|XP_002048996.1| GJ21345 [Drosophila virilis]
gi|194143793|gb|EDW60189.1| GJ21345 [Drosophila virilis]
Length = 714
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/533 (35%), Positives = 287/533 (53%), Gaps = 75/533 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ +S + YLK + GP LV+ P
Sbjct: 135 GEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTVSLIGYLKHFKNQSGPHLVVVP 194
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E + P L + +G+ + R+ R + + +DV +T
Sbjct: 195 KSTLQNWMNEFKHWCPSLNAVCLIGDLKSRKTFIRDV------------LVSGNWDVCIT 242
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ L ++ L W Y ++DEA R+KN + L ++RE F RLL+TGTP+QNNL
Sbjct: 243 SYEMCLREKSALKSFHWQYLVMDEAHRIKNEKTKLAEIIRE-FNSANRLLLTGTPLQNNL 301
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VF + F F +++S + + L +L F+LRR K
Sbjct: 302 HELWALLNFLLPDVFNSSEDFDEWF----NTNSCLGDETL---VSRLHAVLKPFLLRRLK 354
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
++ + L P E + LQ++ Y +L K+ L +L
Sbjct: 355 SEVEKS----LKPKKETKIFVGMSKLQREWYTKLLLKDIDVVNGAGKIEKMRLQNILVHL 410
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+++LD LL KL G RVL+F+QMT+ LD
Sbjct: 411 RKCTNHPYLFDGAEPGPPYTTDEHLVNDSGKMIILDKLLPKLQEQGSRVLIFSQMTRMLD 470
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y+Y RLDG E+R I+ ++++ + + F+F++STRAG
Sbjct: 471 ILEDYCAWRNYNYCRLDGKTEHEDRNQMIQEYNMEKSTK-----------FIFLLSTRAG 519
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V LVTE+TV+E I+ RAE
Sbjct: 520 GLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLVTENTVDEKIVERAE 579
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLH-LFDPKAINNEESD 530
KLRL V+ R ++ T D++ +II FG +F+ +NN + D
Sbjct: 580 VKLRLDRMVIQ---AGRVLENHTQPGKDEILNIIRFGAKDIFNNMDMNNMDED 629
>gi|308806421|ref|XP_003080522.1| chromatin-remodelling complex ATPase ISWI2 (ISS) [Ostreococcus
tauri]
gi|116058982|emb|CAL54689.1| chromatin-remodelling complex ATPase ISWI2 (ISS) [Ostreococcus
tauri]
Length = 1036
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/488 (37%), Positives = 265/488 (54%), Gaps = 65/488 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +Q+ GL+W+IR + G+N +L DEMGLGKTLQ IS L YL + GP +V+ P
Sbjct: 171 GKMREYQLAGLNWMIRLFDHGINGILADEMGLGKTLQTISLLGYLHEYRGITGPHMVVVP 230
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E ++ P + ++ G E+R ++ + P FDV +T
Sbjct: 231 KSTLGNWMNEFKRWCPVIRTFKFHGNAEEREALKAKY------------LVPGGFDVCVT 278
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++V+ ++ L + W Y IIDEA RLKN +S L VLR R+L+TGTP+QNNL
Sbjct: 279 SYEMVIKEKNALKRFHWRYIIIDEAHRLKNENSRLSLVLR-TMSANNRMLITGTPLQNNL 337
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VFG QF F + +++ L +L F+LRR K
Sbjct: 338 HELWALLNFLLPEVFGNAGQFEEWFGNVEDGEEGGSDAVVQQ----LHKVLRPFLLRRLK 393
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRT----------- 317
++ LPP E +T +QK Y IL+K++ + + + R+
Sbjct: 394 TEV----ETSLPPKKETILKIGMTEMQKTFYKRILQKDIDIVNSGADRSRLLNIVMQLRK 449
Query: 318 -ANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L A SGKL +LD LL +L G RVL+F+QMT+ LDIL
Sbjct: 450 CCNHPYLFQGAEPGPPYITGDHLIESSGKLALLDKLLPRLMERGSRVLIFSQMTRLLDIL 509
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D++ R+Y Y R+DGS E R I F+ + G++ F F++STRAGG+
Sbjct: 510 EDYMMYRRYQYCRIDGSTDGETRENHIDAFNKE-----------GSEKFAFLLSTRAGGL 558
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI Y+ DWNPQ+D QA+ RAHRIGQ V T+ +VEE ++ +A +K
Sbjct: 559 GINLATADTVIIYDSDWNPQMDLQAMDRAHRIGQKKEVQVFRFCTDGSVEEKVIEKAYKK 618
Query: 482 LRLSHNVV 489
L L V+
Sbjct: 619 LALDALVI 626
>gi|326480845|gb|EGE04855.1| chromodomain helicase hrp3 [Trichophyton equinum CBS 127.97]
Length = 1558
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 277/509 (54%), Gaps = 74/509 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F +LK Q++G+++L ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF
Sbjct: 494 DFIQNGQLKEFQIKGVNFLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPF 553
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
+V+ PLS W +TP + + Y G RR I+ YE + + N+ F
Sbjct: 554 IVIVPLSTMPAWSETFDYWTPDVNYIVYSGPEPARRIIKD--YELLAD----GNLKRPKF 607
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ VL D FL+QI W + IDEA RLKN S LY L + F RLL+TGTP
Sbjct: 608 NVLLTTYEYVLQDASFLNQIKWQFMAIDEAHRLKNRDSQLYTKLLD-FKSSCRLLITGTP 666
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL ALM F P V +++ + +A + + L + +M
Sbjct: 667 VQNNLGELSALMDFLNPGVI-EIDENMDLNSEAASA-----------KLADLTQAIQPYM 714
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL-----------PKLLA 312
LRRTK K+ LPP +E ++ +Q ++Y +IL K P LL
Sbjct: 715 LRRTKSKV----ESELPPKSEKIIRVELSDVQLELYKNILTKNYDALNHGGKGPKPSLLN 770
Query: 313 L-----------------------SSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
+ S+R + T+SGK++VLD LL KL N GHRVL
Sbjct: 771 IMMELKKASNHPFMFWGPEEQAGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVL 830
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + L+IL ++++ R ++Y+RLDG+I A R AI H++ A G+
Sbjct: 831 IFSQMVRMLNILANYMDARGFNYQRLDGTIAAGPRRLAIEHYN-----------APGSTD 879
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ T
Sbjct: 880 FTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDT 939
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREV 498
VEE ++ RA KL L + V D E
Sbjct: 940 VEEEVLERARNKLLLEFITIQRGVTDNEA 968
>gi|326476226|gb|EGE00236.1| chromodomain helicase [Trichophyton tonsurans CBS 112818]
Length = 1558
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 192/509 (37%), Positives = 277/509 (54%), Gaps = 74/509 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F +LK Q++G+++L ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF
Sbjct: 494 DFIQNGQLKEFQIKGVNFLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPF 553
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
+V+ PLS W +TP + + Y G RR I+ YE + + N+ F
Sbjct: 554 IVIVPLSTMPAWSETFDYWTPDVNYIVYSGPEPARRIIKD--YELLAD----GNLKRPKF 607
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ VL D FL+QI W + IDEA RLKN S LY L + F RLL+TGTP
Sbjct: 608 NVLLTTYEYVLQDASFLNQIKWQFMAIDEAHRLKNRDSQLYTKLLD-FKSSCRLLITGTP 666
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL ALM F P V +++ + +A + + L + +M
Sbjct: 667 VQNNLGELSALMDFLNPGVI-EIDENMDLNSEAASA-----------KLADLTQAIQPYM 714
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL-----------PKLLA 312
LRRTK K+ LPP +E ++ +Q ++Y +IL K P LL
Sbjct: 715 LRRTKSKV----ESELPPKSEKIIRVELSDVQLELYKNILTKNYDALNHGGKGPKPSLLN 770
Query: 313 L-----------------------SSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
+ S+R + T+SGK++VLD LL KL N GHRVL
Sbjct: 771 IMMELKKASNHPFMFWGPEEQAGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVL 830
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + L+IL ++++ R ++Y+RLDG+I A R AI H++ A G+
Sbjct: 831 IFSQMVRMLNILANYMDARGFNYQRLDGTIAAGPRRLAIEHYN-----------APGSTD 879
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ T
Sbjct: 880 FTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDT 939
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREV 498
VEE ++ RA KL L + V D E
Sbjct: 940 VEEEVLERARNKLLLEFITIQRGVTDNEA 968
>gi|405975395|gb|EKC39961.1| Chromodomain-helicase-DNA-binding protein 1 [Crassostrea gigas]
Length = 1787
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 212/539 (39%), Positives = 298/539 (55%), Gaps = 81/539 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++G++WL+ + +V+L DEMGLGKT+Q I FLS L + GP +++ PLS
Sbjct: 517 LRDYQLDGVNWLMHTWSKENSVILADEMGLGKTIQTIGFLSILYNTFQVYGPNVLVVPLS 576
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E + P++ V+ Y+G+ R IR + H S L F+VL+TTY
Sbjct: 577 TIAAWQREFKLWAPEMNVVIYLGDISSRNKIREHEWCH-------SGNKRLKFNVLVTTY 629
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+++L D+ FL + W I+DEA RLKN S+LY L E F RLL+TGTP+QN+L E
Sbjct: 630 EILLKDKSFLGSVNWATLIVDEAHRLKNDDSLLYKTLFE-FNSNHRLLITGTPLQNSLKE 688
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP F F SSA K G F +L L +F+LRR K+
Sbjct: 689 LWALLHFIMPDKFYKWADFEEKH------SSAQKTG-----FVNLHKELESFLLRRVKKD 737
Query: 277 LVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLA-----LSS---------R 316
+ + LP TE ++ +QK+ Y IL K L +SS +
Sbjct: 738 VEKS----LPAKTEQILRVEMSSIQKQYYRWILTKNYKALSKGLKGNVSSFVNIIMELKK 793
Query: 317 TANHQSLQN--------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
NH L SGKL++LD LL +L SGHRVL+F+QM + LDIL
Sbjct: 794 CCNHSQLIRPPEEEFSDRLASLVKGSGKLILLDKLLLRLKESGHRVLIFSQMVRMLDILA 853
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
++L++R + Y+RLDGS+R + R A+ HF+ A G++ F F++STRAGG+G
Sbjct: 854 EYLQMRHFQYQRLDGSVRGDLRKQAMDHFN-----------AEGSEDFCFLLSTRAGGLG 902
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+++VEE I+ RA+RK+
Sbjct: 903 VNLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVSVYRLVTKNSVEEDIVERAKRKM 962
Query: 483 RLSHNVV------GDDVVDREV--KERTAVETDDLRSII-FGL-HLFDPKAINNEESDD 531
L H V+ G V++R + T D+L SI+ FG LF N+E+ D+
Sbjct: 963 VLDHLVIQRMDTTGRTVLNRGIPSSNSTPFNKDELTSILKFGAEELFKE---NDEDEDE 1018
>gi|401882858|gb|EJT47099.1| chromatin remodelling complex ATPase chain [Trichosporon asahii
var. asahii CBS 2479]
gi|406700517|gb|EKD03684.1| chromatin remodelling complex ATPase chain [Trichosporon asahii
var. asahii CBS 8904]
Length = 1069
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/501 (35%), Positives = 274/501 (54%), Gaps = 70/501 (13%)
Query: 25 PVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQM 84
P + + +++ +QV+GL+W++ + G+N +L DEMGLGKTLQ ISFL YLKF +
Sbjct: 176 PTSSRRARLGGKMRDYQVQGLNWMVSLHHNGINGILADEMGLGKTLQTISFLGYLKFHRG 235
Query: 85 SPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNV 144
GP L++ P S D W E+ ++ P VL G +E+R + S +
Sbjct: 236 INGPHLIVVPKSTLDNWAREVERWVPGFRVLVLQGTKEERAELIN------------SKI 283
Query: 145 SPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLL 204
FDVL+++Y++ L ++ L + W Y IIDEA R+KN S+L ++R F RLL
Sbjct: 284 LTQQFDVLISSYEMCLREKSTLRKFSWEYIIIDEAHRIKNVDSLLSQIIRT-FASRGRLL 342
Query: 205 MTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGI 264
+TGTP+QNNL ELWAL++F +P VF + F FK S + + +Q L +
Sbjct: 343 ITGTPLQNNLQELWALLNFILPDVFSSSEDFDEWFK----SQPGDEPDAVVKQ---LHKV 395
Query: 265 LSAFMLRRTKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKEL------------ 307
L F+LRR K + H +LP +T +Q+K Y +L K++
Sbjct: 396 LRPFLLRRVK---ADVEHSLLPKKEINLYVGMTEMQRKWYRMLLEKDIDAVNGAGGKKEG 452
Query: 308 -PKLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRV 348
+LL + + NH L + A +GK+++LD LLK + G RV
Sbjct: 453 KTRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVDNAGKMIILDKLLKSMKAKGSRV 512
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM++ LDIL+D+ + R + Y R+DG+ E+R AI ++ A ++
Sbjct: 513 LIFSQMSRVLDILEDYCQFRGHKYCRIDGNTAHEDRINAIDEYN-----------APDSE 561
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F+F+++TRAGG+G+NLV AD V+ ++ DWNPQ D QA+ RAHRIGQ V +T+
Sbjct: 562 KFIFLLTTRAGGLGINLVTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITQD 621
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
+EE I+ RA +KL+L V+
Sbjct: 622 AIEERILERATQKLKLDQLVI 642
>gi|198430685|ref|XP_002130660.1| PREDICTED: hypothetical protein [Ciona intestinalis]
Length = 1867
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 187/500 (37%), Positives = 273/500 (54%), Gaps = 80/500 (16%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +L+ +Q++G++WL + G +V+L DEMGLGKT+Q+ISFLSYL + G FL
Sbjct: 500 FQGKLQLRDYQLQGVNWLAHSWCKGNSVILADEMGLGKTIQSISFLSYLYHTHELYGLFL 559
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY----EHVKEQSQMSNVSP 146
++ PLS W E + P + V+ Y+G++ R IR + +H K
Sbjct: 560 IIVPLSTMTSWQVEFQTWAPYMNVIVYMGDQSSRATIREVEWMFPNKHYK---------- 609
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
F+ +LT+Y+++L D+ FL W +DEA RLKN S+LY L+E F RLL+T
Sbjct: 610 --FNAVLTSYEILLKDKSFLGSHSWAVIAVDEAHRLKNDDSLLYRSLKE-FKSNHRLLIT 666
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QN+L ELWAL+HF MP F T + F S +TSL +L
Sbjct: 667 GTPLQNSLKELWALLHFIMPDKFETWSDFEEEHAKNRDSG-----------YTSLHKVLQ 715
Query: 267 AFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLL-----ALSS 315
F+LRR K+++ + LP E ++ LQK+ Y +L K L + +S
Sbjct: 716 PFLLRRVKKEVEKS----LPSKVEQILRVPMSSLQKQYYKWLLTKNYAALTKGGRGSFTS 771
Query: 316 ---------RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVL 349
+ NH L SGK+++LD LL +L +GHRVL
Sbjct: 772 FCNIIMELKKCCNHAFLVKAPETEATSSEMLLKVLLRNSGKMILLDKLLIRLKENGHRVL 831
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDI+Q++L +R+ ++RLDGS+ ++ R A+ HF+ A G++
Sbjct: 832 IFSQMVRMLDIIQEYLVVRRLQFQRLDGSVSSDLRRRALDHFN-----------AEGSED 880
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL ADTVI ++ DWNP D QA RAHRIGQ N V LV +
Sbjct: 881 FCFLLSTRAGGLGINLATADTVIIFDSDWNPMNDLQAQARAHRIGQKNQVNIYRLVCAGS 940
Query: 470 VEEVIMRRAERKLRLSHNVV 489
VEE I+ RA++K+ L H V+
Sbjct: 941 VEEDIIERAKKKMVLDHLVI 960
>gi|145349184|ref|XP_001419020.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579250|gb|ABO97313.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 956
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 185/488 (37%), Positives = 264/488 (54%), Gaps = 66/488 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +Q+ GL+W+IR + G+N +L DEMGLGKTLQ IS L YL + GP +V+ P
Sbjct: 90 GKMREYQIAGLNWMIRLFDHGINGILADEMGLGKTLQTISLLGYLAEYRGVTGPHMVVVP 149
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E ++ P + ++ G E+R E + + P FDV +T
Sbjct: 150 KSTLGNWMNEFKRWCPMIRTFKFHGNAEER------------EAQKAKFLVPGGFDVCVT 197
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++V+ ++ L + W Y IIDEA RLKN +S L VLR F R+L+TGTP+QNNL
Sbjct: 198 SYEMVIKEKTALKKFHWRYIIIDEAHRLKNENSRLSIVLRT-FSANNRMLITGTPLQNNL 256
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VFG QF F + G + Q L +L F+LRR K
Sbjct: 257 HELWALLNFLLPEVFGNAGQFDEWFANVEDGEGGS--GAVVSQ---LHKVLRPFLLRRLK 311
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRT----------- 317
++ LPP E +T +QK Y IL+K++ + + + R+
Sbjct: 312 TEV----ETSLPPKKETILKIGMTEMQKTFYKRILQKDIDIVNSGADRSRLLNIVMQLRK 367
Query: 318 -ANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L A SGKL +LD LL +L G RVL+F+QMT+ LDIL
Sbjct: 368 CCNHPYLFQGAEPGPPYITGDHLIESSGKLALLDKLLPRLMQRGSRVLIFSQMTRLLDIL 427
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D+L R Y Y R+DGS R I F+ + G++ F F++STRAGG+
Sbjct: 428 EDYLMYRNYQYCRIDGSTDGAVREDHIDAFNKE-----------GSEKFCFLLSTRAGGL 476
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI Y+ DWNPQ+D QA+ RAHRIGQ V T+ +VEE ++ +A +K
Sbjct: 477 GINLATADTVIIYDSDWNPQMDLQAMDRAHRIGQKKEVQVFRFCTDGSVEEKVIEKAYKK 536
Query: 482 LRLSHNVV 489
L L V+
Sbjct: 537 LALDALVI 544
>gi|307210254|gb|EFN86904.1| Chromodomain-helicase-DNA-binding protein 1 [Harpegnathos saltator]
Length = 1825
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 203/536 (37%), Positives = 293/536 (54%), Gaps = 75/536 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+W+I + +V+L DEMGLGKT+Q I FL YL +Q GPFL++ PLS
Sbjct: 451 LRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQTICFLYYLFHTQQLYGPFLLVVPLS 510
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W EM+++ P + + Y+G+ R IR E + L F+ +LTTY
Sbjct: 511 TMTSWQREMSQWAPDMNFVTYLGDVSSRNVIR--------EHEWCYSTKRLKFNAILTTY 562
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D+ FL + W ++DEA RLKN S+LY L E F RLL+TGTP+QN+L E
Sbjct: 563 EIVLKDKTFLGALNWAVLLVDEAHRLKNDDSLLYKALAE-FHTNHRLLITGTPLQNSLKE 621
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP F + +F + H ++A K ++ L L F+LRR K+
Sbjct: 622 LWALLHFIMPVKFNSWEEF-----EKEHENAAQK------GYSKLHKQLEPFILRRVKKD 670
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRKE---------------------------- 306
+ + + + E+T +QK+ Y IL K
Sbjct: 671 VEKSLPAKVEQILRVEMTSVQKQYYKWILTKNYSALRKGTKGSTMTFLNIVIELKKCCNH 730
Query: 307 --LPKLLALSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
L K + +N LQ SGKLV+LD LL +L GHRVL+F+QM + LDI+
Sbjct: 731 AFLTKPTEYERKDSNEDYLQQLIRGSGKLVLLDKLLVRLREKGHRVLIFSQMVRMLDIIG 790
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
++L+ + + ++RLDGSI+ E R A+ HF+ A G+ F F++STRAGG+G
Sbjct: 791 EYLQKKHFPFQRLDGSIKGELRKQALDHFN-----------AEGSTDFCFLLSTRAGGLG 839
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+++VEE I+ RA++K+
Sbjct: 840 INLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKM 899
Query: 483 RLSHNVVGD-DVVDREVKERTAVETD-------DLRSII-FGLH-LFDPKAINNEE 528
L H V+ D R V ++ T+ DL +I+ FG LF + +EE
Sbjct: 900 VLDHLVIQRMDTTGRTVLDKKNAGTNSNPFNKEDLNAILKFGAEDLFKDEEDGDEE 955
>gi|403177018|ref|XP_003335615.2| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172692|gb|EFP91196.2| adenosinetriphosphatase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1125
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 266/500 (53%), Gaps = 84/500 (16%)
Query: 21 DGQTPVDAAEFGVT--------AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQA 72
D Q+ D F T ++ +QV+GL+W+I + G+N +L DEMGLGKTLQ
Sbjct: 199 DSQSAADDEPFVFTESPSYVKGGTMRDYQVQGLNWMISLFHNGINGILADEMGLGKTLQT 258
Query: 73 ISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY 132
ISFL YLK + GP LV+ P S D WV E + P +++ G +++R +I +
Sbjct: 259 ISFLGYLKHHRSLSGPHLVIVPKSTLDNWVREFDFWVPGFKLVSLKGSKDERGDICQQ-- 316
Query: 133 EHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNV 192
+L +DV IPW Y +IDEA R+KN S+L +
Sbjct: 317 ------------------ILAQDFDV----------IPWEYIVIDEAHRIKNVDSMLSQI 348
Query: 193 LREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTF---KDAVHSSSAP 249
+R F RLL+TGTP+QNNL ELWAL++F +P VF + F + F ++ SS+
Sbjct: 349 VR-LFQSRSRLLITGTPLQNNLQELWALLNFLLPDVFSSSEDFDAWFERKRNGAEDSSSD 407
Query: 250 KRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASIL 303
+ +Q L +L F+LRR K + + L P EI V +Q+K Y IL
Sbjct: 408 AENSVVKQ---LHKVLRPFLLRRVKSDVEKS----LLPKKEINVYVGMTEMQRKWYKMIL 460
Query: 304 RKELPKLLALSSRTANHQSLQNTA--------------SGKLVVLDLLLKKLYNSGHRVL 349
K++ L + NH L + A SGK+++LD LLK + G RVL
Sbjct: 461 EKDIDAL----RKCCNHPYLFDGAESPPFTTDEHLVYNSGKMIILDKLLKAMKAKGSRVL 516
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM++ LDIL+D+ R+Y Y R+DG E+R AI ++ + G+
Sbjct: 517 IFSQMSRVLDILEDYCFFRQYEYCRIDGQTAHEDRIGAIDEYNKE-----------GSSK 565
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF+++TRAGG+G+NL AD V+ ++ DWNPQ D QA+ RAHRIGQ V VTE+
Sbjct: 566 FVFLLTTRAGGLGINLTTADIVVLFDSDWNPQADLQAMDRAHRIGQKKQVYVFRFVTENA 625
Query: 470 VEEVIMRRAERKLRLSHNVV 489
VEE ++ RA +KLRL V+
Sbjct: 626 VEEKVLERAAQKLRLDQLVI 645
>gi|310792871|gb|EFQ28332.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 1119
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 184/499 (36%), Positives = 269/499 (53%), Gaps = 83/499 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +QV GL+WLI + G++ +L DEMGLGKTLQ ISFL YL+ GP +V+
Sbjct: 178 IKGQMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHIMGITGPHIVI 237
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI--RRTMYEHVKEQSQMSNVSPLPFD 150
P S D W E K+TP++ VL G +E+R + R + E FD
Sbjct: 238 VPKSTLDNWKREFEKWTPEVNVLVLQGAKEERNALINDRLVNED--------------FD 283
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
V +T+Y+++L ++ L + W Y IIDEA R+KN S L V+R F RLL+TGTP+
Sbjct: 284 VCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIR-VFNSRNRLLITGTPL 342
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT---SLKGILSA 267
QNNL ELWAL++F +P VFG F F G+ ++Q T L +L
Sbjct: 343 QNNLHELWALLNFLLPDVFGDSEAFDQWFS-----------GREQDQDTVVQQLHRVLRP 391
Query: 268 FMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS------ 315
F+LRR K + + L P E+ + +Q K Y IL K++ + +
Sbjct: 392 FLLRRVKSDVEKS----LLPKKEVNLYLGMSDMQVKWYQKILEKDIDAVNGANGKRESKT 447
Query: 316 ----------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+ NH L A +GK+VVLD LL ++ G RVL+
Sbjct: 448 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNAGKMVVLDKLLARMQKQGSRVLI 507
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R+Y Y R+DG E+R AAI ++ G++ F
Sbjct: 508 FSQMSRLLDILEDYCVFREYKYCRIDGGTAHEDRIAAIDEYN-----------KPGSEKF 556
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+F+++TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VT++ +
Sbjct: 557 IFLLTTRAGGLGINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAI 616
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 617 EEKVLERAAQKLRLDQLVI 635
>gi|341896012|gb|EGT51947.1| CBN-ISW-1 protein [Caenorhabditis brenneri]
Length = 1009
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 267/499 (53%), Gaps = 71/499 (14%)
Query: 27 DAAEFGV-TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D + F + E++ +QV GL+WL +N +L DEMGLGKTLQ IS L Y+K +
Sbjct: 121 DKSPFYIENGEMRDYQVRGLNWLASLQHNNINGILADEMGLGKTLQTISLLGYMKHYKNK 180
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
P LV+ P S W +E K+ P ++ + +G+ E R + +T+ +
Sbjct: 181 ASPHLVIVPKSTLQNWANEFKKWCPSIKAVVLIGDEEARNRVLQTV------------IL 228
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
P FDV TTY+++L +G L ++ W Y IIDEA R+KN S L +RE RLL+
Sbjct: 229 PQDFDVCCTTYEMMLKVKGQLKKLRWKYIIIDEAHRIKNEKSKLSETVRE-LNSENRLLI 287
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGIL 265
TGTP+QNNL ELWAL++F +P +F + + F S F + S + + L +L
Sbjct: 288 TGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNT-------DLVQRLHKVL 340
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE------------- 306
F+LRR K + + L P E+ V +Q++ Y +L K+
Sbjct: 341 QPFLLRRIKSDVEKS----LLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKA 396
Query: 307 -LPKLLALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
L +L + NH L + A SGK+VVLD LL KL G RVL+
Sbjct: 397 RLMNILMHLRKCVNHPYLFDGAEPGPPYTTDQHLVDNSGKMVVLDKLLVKLKEQGSRVLI 456
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+Q ++ LD+L+D+ R Y Y RLDGS E+R AI ++ A + F
Sbjct: 457 FSQFSRMLDLLEDYCWWRHYDYCRLDGSTPHEDRSNAIEAYN-----------APDSKKF 505
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+FM++TRAGG+G+NL AD VI Y+ DWNPQ D QA+ RAHRIGQ V L+TE+TV
Sbjct: 506 IFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTV 565
Query: 471 EEVIMRRAERKLRLSHNVV 489
+E I+ +AE KLRL + V+
Sbjct: 566 DERIIEKAEAKLRLDNIVI 584
>gi|388583467|gb|EIM23769.1| hypothetical protein WALSEDRAFT_56274 [Wallemia sebi CBS 633.66]
Length = 1162
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 271/500 (54%), Gaps = 77/500 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +++ +QV+GL+W+I + G+N +L DEMGLGKTLQ ISFL+YLK + G L
Sbjct: 184 FIQNCQMRDYQVQGLNWMIGLHHNGINGILADEMGLGKTLQTISFLAYLKHFKDISGYHL 243
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V P S D W E K+ P +V+ G +E+R I VKE ++ P FD
Sbjct: 244 VCVPKSTLDNWAREFTKWCPDFKVVVLQGNKEEREKI-------VKE-----SILPGDFD 291
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VL+ +Y++ L ++ + ++ W Y IIDEA R+KN +S+L ++R F RLL+TGTP+
Sbjct: 292 VLIASYEICLREKSAIKRLSWEYIIIDEAHRIKNANSLLSQIVR-IFNSRNRLLITGTPL 350
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTF---KDAVHSSSAPKRGKIKEQFTSLKGILSA 267
QNNL ELWAL++F +P VF + F F +D +S E L +L
Sbjct: 351 QNNLQELWALLNFLLPDVFSSAEDFDDWFTNNRDGKENSD--------EVVKQLHKVLRP 402
Query: 268 FMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALSS------ 315
F+LRR K + + L P EI T +Q+K Y I+ K++ + + S
Sbjct: 403 FLLRRVKADVEKS----LLPKKEINLYVGLTDMQRKWYKGIIEKDIDLVNGMGSSKKEGK 458
Query: 316 -----------RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVL 349
+ NH L + A SGK+++LD LLK + G RVL
Sbjct: 459 TRLLNIVMQLRKCCNHPYLFDGAEPGPPYTTDEHLVFNSGKMLILDKLLKSMKAKGSRVL 518
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM++ LDIL+D+ R Y Y R+DG ++R +AI ++ + G++
Sbjct: 519 IFSQMSRVLDILEDYCMFRDYQYCRIDGQTSHDDRISAIDEYNKE-----------GSEK 567
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
++F+++TRAGG+G+ L AD V+ Y+ DWNPQ D QA+ RAHRIGQ V VTE
Sbjct: 568 YIFLLTTRAGGLGITLNTADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVYVFRFVTEDA 627
Query: 470 VEEVIMRRAERKLRLSHNVV 489
VEE I+ RA +KLRL V+
Sbjct: 628 VEERILERAAQKLRLDQLVI 647
>gi|402085293|gb|EJT80191.1| ISWI chromatin-remodeling complex ATPase ISW2 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1125
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 272/493 (55%), Gaps = 71/493 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ ++ +Q+ GL+WLI + G++ +L DEMGLGKTLQ ISFL YL+ GP LV+
Sbjct: 182 IQGTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHIMDITGPHLVI 241
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E+A++TP++ VL G +E+R + + + + ++ FDV
Sbjct: 242 VPKSTLDNWKREIARWTPEVNVLVLQGAKEERAAL---INDRLVDED---------FDVC 289
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+++L ++ L + W Y IIDEA R+KN S L V+R F RLL+TGTP+QN
Sbjct: 290 VTSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQVIR-LFNSRNRLLITGTPLQN 348
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
N+ ELWAL++F +P VFG F D S + +Q L +L F+LRR
Sbjct: 349 NIHELWALLNFLLPDVFGDSEAF-----DQWFSGEGKDSDTVVQQ---LHRVLRPFLLRR 400
Query: 273 TKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKELPKLLALSS------------ 315
K + + +LP ++T +Q+ Y IL K++ + +
Sbjct: 401 VKSDVEKS---LLPKKEVNLYLKMTEMQRNWYQKILEKDIDAVNGANGKRESKTRLLNIV 457
Query: 316 ----RTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH L A +GK+V+LD LLK+L + G RVL+F+QM++
Sbjct: 458 MQLRKCCNHPYLFEGAEPGPPYTTDEHLVYNAGKMVILDKLLKRLQSQGSRVLIFSQMSR 517
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R+Y Y R+DGS E+R AAI ++ G++ FVF+++T
Sbjct: 518 VLDILEDYCVFREYKYCRIDGSTAHEDRIAAIDDYN-----------KPGSEKFVFLLTT 566
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL AD VI Y+ DWNPQ D QA+ RAHRIGQ V+ + ++T+EE ++
Sbjct: 567 RAGGLGINLTTADIVILYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFLIDNTIEEKVLE 626
Query: 477 RAERKLRLSHNVV 489
RA +KL L V+
Sbjct: 627 RAAQKLHLDRLVI 639
>gi|171677949|ref|XP_001903925.1| hypothetical protein [Podospora anserina S mat+]
gi|170937043|emb|CAP61702.1| unnamed protein product [Podospora anserina S mat+]
Length = 1057
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 186/497 (37%), Positives = 270/497 (54%), Gaps = 79/497 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ ++ +QV GL+WLI + G++ +L DEMGLGKTLQ ISFL YL+ GP L+
Sbjct: 150 INGTMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHIMGITGPHLIT 209
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E AK+TP++ VL G +E+R + + + + ++ FDV
Sbjct: 210 VPKSTLDNWKREFAKWTPEVNVLILQGAKEERHQL---INDRLVDED---------FDVC 257
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+++L ++ L + W Y IIDEA R+KN S L V+R F RLL+TGTP+QN
Sbjct: 258 ITSYEMILREKAHLRKFAWEYIIIDEAHRIKNEESSLAQVIR-MFNSRNRLLITGTPLQN 316
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT---SLKGILSAFM 269
NL ELWAL++F +P VFG F F G+ ++Q T L +L F+
Sbjct: 317 NLHELWALLNFLLPDVFGDSEAFDQWFS-----------GQDRDQDTVVQQLHKVLRPFL 365
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKL 310
LRR K + + L P E+ V +Q K Y IL K++ +L
Sbjct: 366 LRRVKSDVEKS----LLPKKEVNVYIGMSEMQVKWYKRILEKDIDAVNGAGGKRESKTRL 421
Query: 311 LALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
L + + NH L A SGK+++LD LLK++ RVL+F+
Sbjct: 422 LNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIILDKLLKRMQAQDSRVLIFS 481
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM++ LDIL+D+ R Y Y R+DG E+R AAI ++ G++ F+F
Sbjct: 482 QMSRLLDILEDYCVFRGYKYCRIDGGTAHEDRIAAIDEYN-----------KPGSEKFIF 530
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
+++TRAGG+G+NL AD VI Y+ DWNPQ D QA+ RAHRIGQ V+ VT++ +EE
Sbjct: 531 LLTTRAGGLGINLTTADIVILYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEE 590
Query: 473 VIMRRAERKLRLSHNVV 489
++ RA +KLRL V+
Sbjct: 591 KVLERAAQKLRLDQLVI 607
>gi|302811536|ref|XP_002987457.1| hypothetical protein SELMODRAFT_158748 [Selaginella moellendorffii]
gi|300144863|gb|EFJ11544.1| hypothetical protein SELMODRAFT_158748 [Selaginella moellendorffii]
Length = 1292
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 200/549 (36%), Positives = 295/549 (53%), Gaps = 82/549 (14%)
Query: 13 IIHDNDERDGQTPVD-AAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQ 71
+ HD + TP D EF V L P+Q+EGL++L + G V+L DEMGLGKT+Q
Sbjct: 244 VDHDKRRQKAFTPYDKTPEFVVGGVLHPYQLEGLNFLRYAWQQGKPVILADEMGLGKTIQ 303
Query: 72 AISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTM 131
ISFL+ L +S P L++ PLS W E + + P++ ++ Y+G + R IR+
Sbjct: 304 TISFLTSLLHEGVSL-PHLIVAPLSTLRNWEREFSIWAPQMSIVTYIGSAQAREIIRQKE 362
Query: 132 YEHVKE------QSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNP 185
+ KE + S + F+VLLT+Y++V D L I W I+DE RLKN
Sbjct: 363 FFLPKERKPEKGKKNASRQRRVKFNVLLTSYEMVNTDSAVLKPIKWECLIVDEGHRLKNK 422
Query: 186 SSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHS 245
S L+ L ++ R+L+TGTP+QNNL EL+ LM+F S F +L +F FKD H
Sbjct: 423 DSKLFQTLH-NYSTYSRVLLTGTPLQNNLDELFTLMYFLDSSKFSSLEEFQLEFKDINH- 480
Query: 246 SSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVY 299
+EQ L +LS+ +LRR K+ +++ LPP E+ V +QK Y
Sbjct: 481 ---------EEQVQRLHTMLSSHLLRRVKKDVLK----ELPPKKELIVRVELSAIQKDYY 527
Query: 300 ASILRK--------------------ELPKLLA-------LSSRTANHQSLQNT---ASG 329
++L + EL K+ A + T + ++Q T ASG
Sbjct: 528 RAVLTRNYEVLSRHSGVQVSLNNLVMELRKICAHPFLLDGVEEETEDEDAVQKTLVEASG 587
Query: 330 KLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIR 389
KL++LD + KL GHRVL+++Q + LDIL+D+L + ++YER+DG + +R
Sbjct: 588 KLLLLDKMTTKLKAEGHRVLIYSQFQRVLDILEDWLAYKNWNYERIDGKVSGADR----- 642
Query: 390 HFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQR 449
QS I+R A G+ F F++STRAGG+G+NL ADTV+ Y+ DWNP D QA+ R
Sbjct: 643 ----QSRIDRF--NAPGSKIFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADMQAMAR 696
Query: 450 AHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG------------DDVVDRE 497
AHR+GQ + V+ L+T T+EE +M+ +++K+ L H VVG DD++
Sbjct: 697 AHRMGQTSKVMIYRLITRGTIEERMMQLSKKKMVLEHLVVGRMKTQILNQEELDDILRYG 756
Query: 498 VKERTAVET 506
KE A ET
Sbjct: 757 AKELFADET 765
>gi|121701939|ref|XP_001269234.1| chromodomain helicase (Chd1), putative [Aspergillus clavatus NRRL
1]
gi|119397377|gb|EAW07808.1| chromodomain helicase (Chd1), putative [Aspergillus clavatus NRRL
1]
Length = 1506
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 199/513 (38%), Positives = 279/513 (54%), Gaps = 79/513 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+G++++ ++ NV+L DEMGLGKT+Q ++F+++L+ + GPF+
Sbjct: 430 FLQNGELKDFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFIAWLRHVRRQQGPFI 489
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL--P 148
V+ PLS W ++P L + Y G E RN+ +K+ M + +P
Sbjct: 490 VVVPLSTMPSWAETFDNWSPDLNYIVYNGN-EAARNM-------LKDHELMIDGNPRRSR 541
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F+VLLTTY+ VL D FLSQ W + +DEA RLKN S LY L E F P RLL+TGT
Sbjct: 542 FNVLLTTYEYVLQDAAFLSQFKWQFMAVDEAHRLKNRDSQLYQKLLE-FKSPARLLITGT 600
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
PIQNNL+EL ALM F P G ++ + +A +S ++ L + +
Sbjct: 601 PIQNNLAELAALMDFLNP---GVIDVDVDMDLNAEAAS---------QKLAELTNAIQPY 648
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRK----------------- 305
MLRRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 649 MLRRTKSK-VESD---LPPKTEKIIRVELSDVQLEYYKNILTKNYAALNDGAKGQKQSLL 704
Query: 306 ----ELPK--------------LLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHR 347
EL K +L S+R + T+SGK+++LD LL KL GHR
Sbjct: 705 NIMMELKKASNHPFMFPNAEARILEGSTRREDILRALITSSGKMMLLDQLLAKLKRDGHR 764
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LD+L D++E R Y+Y+RLDG+I A R AI HF+ + +
Sbjct: 765 VLIFSQMVKMLDLLGDYMESRGYTYQRLDGTIPAVSRRLAIEHFNAPDSSD--------- 815
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 816 --FCFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSK 873
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
TVEE ++ RA KL L + V D+E E
Sbjct: 874 DTVEEEVIERARNKLLLEFITIQRGVTDKEASE 906
>gi|302796603|ref|XP_002980063.1| hypothetical protein SELMODRAFT_177985 [Selaginella moellendorffii]
gi|300152290|gb|EFJ18933.1| hypothetical protein SELMODRAFT_177985 [Selaginella moellendorffii]
Length = 1274
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 200/549 (36%), Positives = 295/549 (53%), Gaps = 82/549 (14%)
Query: 13 IIHDNDERDGQTPVD-AAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQ 71
+ HD + TP D EF V L P+Q+EGL++L + G V+L DEMGLGKT+Q
Sbjct: 244 VDHDKRRQKAFTPYDKTPEFVVGGVLHPYQLEGLNFLRYAWQQGKPVILADEMGLGKTIQ 303
Query: 72 AISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTM 131
ISFL+ L +S P L++ PLS W E + + P++ ++ Y+G + R IR+
Sbjct: 304 TISFLTSLLHEGVSL-PHLIVAPLSTLRNWEREFSIWAPQMSIVTYIGSAQAREIIRQKE 362
Query: 132 YEHVKE------QSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNP 185
+ KE + S + F+VLLT+Y++V D L I W I+DE RLKN
Sbjct: 363 FFLPKERKPEKGKKNASRQRRVKFNVLLTSYEMVNTDSAVLKPIKWECLIVDEGHRLKNK 422
Query: 186 SSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHS 245
S L+ L ++ R+L+TGTP+QNNL EL+ LM+F S F +L +F FKD H
Sbjct: 423 DSKLFQTLH-NYSTYSRVLLTGTPLQNNLDELFTLMYFLDSSKFSSLEEFQLEFKDINH- 480
Query: 246 SSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVY 299
+EQ L +LS+ +LRR K+ +++ LPP E+ V +QK Y
Sbjct: 481 ---------EEQVQRLHTMLSSHLLRRVKKDVLK----ELPPKKELIVRVELSAIQKDYY 527
Query: 300 ASILRK--------------------ELPKLLA-------LSSRTANHQSLQNT---ASG 329
++L + EL K+ A + T + ++Q T ASG
Sbjct: 528 RAVLTRNYEVLSRHSGVQVSLNNLVMELRKICAHPFLLDGVEEETEDEDAVQKTLVEASG 587
Query: 330 KLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIR 389
KL++LD + KL GHRVL+++Q + LDIL+D+L + ++YER+DG + +R
Sbjct: 588 KLLLLDKMTTKLKAEGHRVLIYSQFQRVLDILEDWLAYKNWNYERIDGKVSGADR----- 642
Query: 390 HFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQR 449
QS I+R A G+ F F++STRAGG+G+NL ADTV+ Y+ DWNP D QA+ R
Sbjct: 643 ----QSRIDRF--NAPGSKIFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADMQAMAR 696
Query: 450 AHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG------------DDVVDRE 497
AHR+GQ + V+ L+T T+EE +M+ +++K+ L H VVG DD++
Sbjct: 697 AHRMGQTSKVMIYRLITRGTIEERMMQLSKKKMVLEHLVVGRMKTQILNQEELDDILRYG 756
Query: 498 VKERTAVET 506
KE A ET
Sbjct: 757 AKELFADET 765
>gi|428671399|gb|EKX72317.1| helicase family member protein [Babesia equi]
Length = 1548
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 182/481 (37%), Positives = 274/481 (56%), Gaps = 54/481 (11%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
+ +L+ +Q++GL+WL+ Y +N + DEMGLGKT+Q I+ L+YLK + G +V
Sbjct: 568 SLNGKLRKYQMDGLNWLVSLYNNKLNGIFADEMGLGKTIQTIALLAYLKDHKGISGVHMV 627
Query: 92 LCPLSVTDG-WVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP-F 149
L PLS G W +E+ + P ++ Y G +E R+++R YE N S P F
Sbjct: 628 LAPLSTLHGNWKNELENWFPSCKICIYEGTKEYRKSMRNRWYE---------NGSCRPNF 678
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
DVLLTT +L D+ +L +I W Y I+DEA RLKNP+S L VL + F++ RRL +TGTP
Sbjct: 679 DVLLTTDSFILRDKTYLRKICWEYLIVDEAHRLKNPNSKLVKVLNQGFVVNRRLALTGTP 738
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTS--------- 260
+QN+L ELWAL++F MP +F + F F + S K ++ S
Sbjct: 739 LQNDLHELWALLNFLMPELFASSKNFDEWFNVPLGSIVRTKDTDTQQAALSEEEQLLIID 798
Query: 261 -LKGILSAFMLRRTKQKLVE-----CGHLMLPPLTEITVLQKKVYASILRKELP--KLLA 312
+ IL F+LRR K ++ + +++ P++ I Q ++Y + +E K++
Sbjct: 799 RIHKILKPFLLRREKYEVADEVPLNFEYVVCCPMSGI---QTRLYEFLSSRETTHNKMIQ 855
Query: 313 LSSRTANHQSLQN-----------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
L + NH L + GK +LD++L +L+ GHRVL+F+QMT LDIL
Sbjct: 856 L-RKVINHPYLYCPGNFPCNDNIIMSCGKFAMLDIILARLFQVGHRVLIFSQMTSLLDIL 914
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+ +L R Y Y RLDGS+ +++R ++ F+ +++ FVF++ST+AG +
Sbjct: 915 EVYLRYRNYQYLRLDGSLNSDQRVDRLKKFNEENS-----------PYFVFILSTKAGAL 963
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
GLNL ADTVI Y+ DWNPQVD QA R HRIGQ + V++I VT +T+EE I++ K
Sbjct: 964 GLNLQTADTVIIYDSDWNPQVDIQAKSRVHRIGQKSQVITIRFVTPNTIEENILKSTSVK 1023
Query: 482 L 482
L
Sbjct: 1024 L 1024
>gi|365990235|ref|XP_003671947.1| hypothetical protein NDAI_0I01350 [Naumovozyma dairenensis CBS 421]
gi|343770721|emb|CCD26704.1| hypothetical protein NDAI_0I01350 [Naumovozyma dairenensis CBS 421]
Length = 1135
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 183/496 (36%), Positives = 276/496 (55%), Gaps = 75/496 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ EL+P+Q++GL+WL+ + G+ +L DEMGLGKTLQ I+FL YL++ + GPFLV+
Sbjct: 117 IHGELRPYQIQGLNWLVSLHTNGIAGILADEMGLGKTLQTIAFLGYLRYMENINGPFLVI 176
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ K+TP ++ G++++R +I +K++ + FD++
Sbjct: 177 APKSTLNNWLREINKWTPDVKAFVLQGDKQERADI-------IKDK-----LLTCDFDIV 224
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++ + ++ L ++ W Y +IDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 225 VASYEITIREKAALKKMNWQYIVIDEAHRIKNEESLLSQVLRE-FTSRNRLLITGTPLQN 283
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F +S + K+ +Q L +L F+LRR
Sbjct: 284 NLHELWALLNFLLPDIFSDSQDFDDWFS---SETSEEDQDKVVKQ---LHTVLQPFLLRR 337
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K VE L P E+ + +QKK Y IL K+L +LL +
Sbjct: 338 IKSD-VETSLL---PKKELNLYVGMSSMQKKWYKQILEKDLDAVNGSNPNKESKTRLLNI 393
Query: 314 S---SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQ 353
+ NH L + A G D L +YNS G RVL+F+Q
Sbjct: 394 VMQLRKCCNHPYLFDGAEPGPPYTTDEHL--VYNSAKLKVLDKLLKKMKEEGSRVLIFSQ 451
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R Y Y R+DGS E+R +I ++ + +D F+F+
Sbjct: 452 MSRVLDILEDYCFFRGYKYCRIDGSTDHEDRIKSIDDYN-----------SPDSDKFIFL 500
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V VT ++VEE
Sbjct: 501 LTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTNNSVEEK 560
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA +KLRL V+
Sbjct: 561 ILERATQKLRLDQLVI 576
>gi|405123294|gb|AFR98059.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Cryptococcus neoformans var. grubii H99]
Length = 1430
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 208/595 (34%), Positives = 315/595 (52%), Gaps = 96/595 (16%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK +QV+GL W+I Y +N +L DEMGLGKT+Q IS ++YL + PGPFLV+ PLS
Sbjct: 566 LKDYQVKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIVPLS 625
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E ++ P + L G +RR Y ++ + F V LTTY
Sbjct: 626 TLTNWTMEFERWAPAVRTLILKGSPA----VRREAYPRLR---------AVDFQVCLTTY 672
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ ++ ++ LS+I W + IIDE R+KN S L L E++ RL++TGTP+QNNL E
Sbjct: 673 EYIIKERPLLSRIKWIHMIIDEGHRMKNVKSKLSQTLNEYYSSRYRLILTGTPLQNNLPE 732
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSAFMLR 271
LWAL++F +P +F ++ F F +A +++ ++ ++ E+ L +L F+LR
Sbjct: 733 LWALLNFVLPKIFNSVKSFDEWF-NAPFANTGGEKMEMNEEEALLVVKRLHKVLRPFLLR 791
Query: 272 RTKQKLVECGHLMLPP------LTEITVLQKKVYASILR-KELPKLLALSSRTANHQSLQ 324
R K K VE LP T+++ LQ K+Y S+ + K LP ++++ + Q+LQ
Sbjct: 792 RLK-KDVES---ELPDKVEKVIYTKMSALQWKLYESVQKYKTLPTDMSVA-KPQKRQNLQ 846
Query: 325 NT---------------------------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
N +GK +LD +L KL+ +GH+VL+F
Sbjct: 847 NALMQLRKICNHPYVFREVDEDFTVGNTTDEQIIRVAGKFELLDRILPKLFKTGHKVLIF 906
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
QMT+ + I+ DF + R + Y RLDGS +AE+R + F+ ++ + V
Sbjct: 907 FQMTEIMTIVSDFFDYRGWKYCRLDGSTKAEDRQTLLSTFNDPNSPYQ-----------V 955
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+GLNL +ADTVI Y+ DWNP D QA RAHRIGQ V + L++ TVE
Sbjct: 956 FILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQDRAHRIGQKKEVRVLRLISSGTVE 1015
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEESDD 531
E+++ RA+RKL + V+ D EV T E + L F D +NEE+++
Sbjct: 1016 ELVLARAQRKLEIDGKVIQAGKFD-EVT--TGAEYEALLQKAFETSAED----DNEETNE 1068
Query: 532 LRLSGLNSM-------VEKVIAMRHEQVSGK------AGRKFEVNPVALLEESDL 573
L LN + +E AM +E+ K +G + E+ P L++ES+L
Sbjct: 1069 LDDDELNELLARGDNELEIFTAMDNERKERKLADWRASGSRGEL-PPPLMQESEL 1122
>gi|303283790|ref|XP_003061186.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226457537|gb|EEH54836.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 962
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 182/488 (37%), Positives = 272/488 (55%), Gaps = 67/488 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +Q+ GL+W+IR + G+N +L DEMGLGKTLQ IS L YL + GP +V+ P
Sbjct: 99 GKMREYQLAGLNWMIRLFDHGINGILADEMGLGKTLQTISLLGYLSEYRGITGPHMVVVP 158
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E ++ P + ++ G EQR+ ++ Y H FDVL+T
Sbjct: 159 KSTLGNWMNEFKRWCPMIRAFKFHGNAEQRQ-AQKDEYMHAG-----------GFDVLVT 206
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++++ ++ L + W Y IIDEA R+KN +S L +R F RLL+TGTP+QNNL
Sbjct: 207 SYEMIIKEKNALKKFHWRYCIIDEAHRIKNENSRLSKTMR-MFSCNNRLLITGTPLQNNL 265
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VFG+ QF F + + + E L +L F+LRR K
Sbjct: 266 HELWALLNFLLPEVFGSAGQFEEWF------GTGEEGAENVEVVQQLHKVLRPFLLRRLK 319
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKEL---------PKLLALS---SR 316
++ + LPP E+ + +QK Y L+K++ +LL + +
Sbjct: 320 AEVEKN----LPPKKEMILKVAMSDMQKDYYKKALQKDIEVVNRGGDRSRLLNMVMQLRK 375
Query: 317 TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L A SGK+V+LD LL +L G RVL+F+QMT+ LDIL
Sbjct: 376 CCNHPYLFQGAEPGPPYFTGEHIIENSGKMVLLDKLLTRLKEKGSRVLIFSQMTRLLDIL 435
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D++ R++ Y R+DG+ E+R AI ++ A G++ F F++STRAGG+
Sbjct: 436 EDYMIYRQHKYCRIDGNTSGEDRENAIDGYN-----------APGSEKFAFLLSTRAGGL 484
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NLV ADTVI Y+ DWNPQ+D QA+ RAHRIGQ V T+ +VEE ++ +A +K
Sbjct: 485 GINLVTADTVIIYDSDWNPQMDLQAMDRAHRIGQTREVSVFRFCTDMSVEEKVIEKAYKK 544
Query: 482 LRLSHNVV 489
L L V+
Sbjct: 545 LALDALVI 552
>gi|365987878|ref|XP_003670770.1| hypothetical protein NDAI_0F02090 [Naumovozyma dairenensis CBS 421]
gi|343769541|emb|CCD25527.1| hypothetical protein NDAI_0F02090 [Naumovozyma dairenensis CBS 421]
Length = 1084
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 186/496 (37%), Positives = 276/496 (55%), Gaps = 75/496 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+ +Q++GL+WLI + + +L DEMGLGKTLQ ISFL YL++ + PGPF+V+
Sbjct: 137 INGQLRTYQIQGLNWLISLHHYKLAGILADEMGLGKTLQTISFLGYLRYVEKIPGPFIVI 196
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ K+TP+++ G++++R + VKE+ + P FDV+
Sbjct: 197 APKSTLNNWLREINKWTPEVDAFILQGDKDERNQL-------VKER-----LLPCKFDVV 244
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++V+ ++ + W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 245 IASYEIVIKEKSSFRKFDWQYIIIDEAHRIKNEESLLSQVLRE-FTSSNRLLITGTPLQN 303
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F ++ + KI +Q L +L F+LRR
Sbjct: 304 NLHELWALLNFLLPDIFADSQDFDEWFS---SETTEDDQDKIVKQ---LHTVLQPFLLRR 357
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K VE L P E+ + +QKK Y IL K++ +LL +
Sbjct: 358 LKND-VETSLL---PKKELNLYVGMSSMQKKWYKQILEKDIDAVNGSNVNKESKTRLLNI 413
Query: 314 S---SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQ 353
+ NH L + A G D L +YNS G RVL+F+Q
Sbjct: 414 VMQLRKCCNHPYLFDGAEPGPPYTTDEHL--IYNSAKLKVLDKLLKKMKEEGSRVLIFSQ 471
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R Y Y R+DGS E+R AI ++ A ++ F+F+
Sbjct: 472 MSRVLDILEDYCYFRGYKYCRIDGSTDHEDRIQAIDDYN-----------APDSEKFIFL 520
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL +A+ V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT ++VEE
Sbjct: 521 LTTRAGGLGINLTSANIVVLYDSDWNPQADLQAMDRAHRIGQKKQVRVFRLVTNNSVEEK 580
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA +KLRL V+
Sbjct: 581 ILERATQKLRLDQLVI 596
>gi|67606806|ref|XP_666775.1| chromatin remodelling complex protein SNF2L [Cryptosporidium
hominis TU502]
gi|54657830|gb|EAL36543.1| chromatin remodelling complex protein SNF2L [Cryptosporidium
hominis]
Length = 1292
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 209/591 (35%), Positives = 310/591 (52%), Gaps = 101/591 (17%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+T ++K +Q+EGL+W+ + Y +N +L DEMGLGKTLQ IS L +LK + GP ++L
Sbjct: 160 ITGKMKFYQLEGLNWMFQLYKHNINGILADEMGLGKTLQTISILGFLKSTFKVEGPHIIL 219
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI------------RRTMY-------- 132
P S D W E+ ++ P L V++ G+R+ R I T+Y
Sbjct: 220 TPRSTLDNWFCELKRWCPSLRVVKLHGDRQLRDEIFSSLLFPGSKVSAGTLYCNESNELA 279
Query: 133 ---EHVKEQSQMSNVSP-----------LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDE 178
E E Q S P L ++V LTT+++ + ++ L +I W Y I+DE
Sbjct: 280 EDEEKDVELRQNSEERPTFANFDYNDGNLHYNVCLTTFEMAIKEKWRLQKISWKYCILDE 339
Query: 179 AQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLST 238
A R+KN S+L V+R RLL+TGTP+QNNL ELW+L++F MP++F + F S
Sbjct: 340 AHRIKNEKSLLSEVVR-LLKSKNRLLITGTPLQNNLRELWSLLNFLMPNLFSSSEDFESL 398
Query: 239 FKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV----- 293
F + S ++ IK +L IL FMLRR K + LPP E+ V
Sbjct: 399 FDFSKLESDDQQKCVIK----TLHQILRPFMLRRLKADV----ERDLPPKRELYVYIGLS 450
Query: 294 -LQKKVYASILRKELPKLLALSS-------------RTANHQSLQN-------------- 325
LQKK+Y+ +L + L L + SS +T NH L +
Sbjct: 451 KLQKKIYSELLTRNLDVLNSASSNKTQMLNLLMQLRKTCNHPYLFDGVEPGPPYVEGFHM 510
Query: 326 -TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEER 384
ASGK+V+L LL KL++ G RVLLF+QMT+ LDI+ D+L Y Y R+DGS ER
Sbjct: 511 VEASGKMVLLHKLLPKLFSQGSRVLLFSQMTRLLDIIDDYLRWSGYPYCRIDGSTPGIER 570
Query: 385 FAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 444
I F+ + G++ +F++STRAGG+G+NL AD VI ++ D+NPQ+D
Sbjct: 571 QERIDIFNKE-----------GSEKLIFLLSTRAGGIGINLATADVVILFDSDFNPQMDL 619
Query: 445 QALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAV 504
QA+ RAHRIGQ V VTE TVEE I+ RA +KL+L ++ ++ +A
Sbjct: 620 QAMDRAHRIGQKKPVTVYRFVTEKTVEERIVERAAKKLKLDSLIIQQGLISN--ASHSAP 677
Query: 505 ETDDLRSII-FG----LHLFDPKAINNEESDDL------RLSGLNSMVEKV 544
+ +L +I FG H D ++ +E+ D + R + +N+ ++K+
Sbjct: 678 DNRELHEMIQFGAQEVYHTRDSSSVTDEDIDTILAAAQERTNEMNAKMKKL 728
>gi|296815930|ref|XP_002848302.1| chromodomain helicase hrp3 [Arthroderma otae CBS 113480]
gi|238841327|gb|EEQ30989.1| chromodomain helicase hrp3 [Arthroderma otae CBS 113480]
Length = 1524
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 191/509 (37%), Positives = 276/509 (54%), Gaps = 74/509 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F +LK Q++G+++L ++ G NV+L DEMGLGKT+Q ++F+++L+ + GPF
Sbjct: 466 DFIQNGQLKEFQIKGVNFLAYNWVRGRNVVLADEMGLGKTVQTVAFINWLRHVRQQQGPF 525
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
+V+ PLS W +TP + + Y G RR I+ YE + + N+ F
Sbjct: 526 IVIVPLSTMPAWSETFDLWTPDVNYIVYSGPEPARRIIKE--YELLTD----GNLKRPKF 579
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ VL D FL+QI W + IDEA RLKN S LY L + F RLL+TGTP
Sbjct: 580 NVLLTTYEYVLQDASFLNQIKWQFMAIDEAHRLKNRESQLYTKLLD-FKSSCRLLITGTP 638
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL ALM F P +++ + +A + + L + +M
Sbjct: 639 VQNNLGELSALMDFLNPGAI-DIDENMDLNSEAASA-----------KLAELTQAIQPYM 686
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL-----------PKLLA 312
LRRTK K+ LPP +E ++ +Q ++Y +IL K P LL
Sbjct: 687 LRRTKSKV----ESELPPKSEKIIRVELSDVQLELYKNILTKNYDALNHGGKGPKPSLLN 742
Query: 313 L-----------------------SSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
+ S+R + T+SGK++VLD LL KL N GHRVL
Sbjct: 743 IMMELKKASNHPFMFWGAEDQAGGSTRREDQLKALVTSSGKMMVLDQLLTKLKNDGHRVL 802
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + L+IL ++++ R ++Y+RLDG+I A R AI H++ A G+
Sbjct: 803 IFSQMVRMLNILANYMDARGFNYQRLDGTIAAGPRRLAIEHYN-----------APGSTD 851
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ T
Sbjct: 852 FTFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDT 911
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREV 498
VEE ++ RA KL L + V D E
Sbjct: 912 VEEEVLERARNKLLLEFITIQRGVTDNEA 940
>gi|429966476|gb|ELA48473.1| hypothetical protein VCUG_00082 [Vavraia culicis 'floridensis']
Length = 833
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 269/494 (54%), Gaps = 69/494 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ L+ +Q+EG++WLI + +N +L DEMGLGKTLQ I+FL YLK + P L++
Sbjct: 63 IRGTLREYQIEGVNWLISMHEKNINCILADEMGLGKTLQTITFLGYLKNFLKNKAPHLLI 122
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S+ W +E KF P + + + + ++ + M N + +DV+
Sbjct: 123 VPKSLLHNWKAEFTKFLPSFRLFIFHASQAEIKDT----------EENMENTN---YDVV 169
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TTY++ + + +I WCY +IDEA R+KN +S+L ++R F RLL+TGTP+QN
Sbjct: 170 ITTYEMCISAKKVFQRIQWCYLVIDEAHRIKNEASLLSKIVR-IFRCEHRLLLTGTPLQN 228
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
N+ ELWAL++F P +F Q F+ + K+G I + L+ +L F LRR
Sbjct: 229 NVHELWALLNFLDPKLFKDPEQ----FEKWITQMENDKKGGIDQ----LRKVLQLFFLRR 280
Query: 273 TKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKELPKLLALSS------------ 315
K+ + +LP ++T +Q+ +Y IL K+L LL
Sbjct: 281 EKR---DVEKTLLPKKVINLYPQLTTMQRNLYKMILEKDLTPLLNKREVKSSLLNVVIQL 337
Query: 316 -RTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + SGK++ LD LL ++ RVL+F QMT+TLD
Sbjct: 338 RKCCNHPYLFDGMEPGPPYTTDEHLVYNSGKMMYLDKLLTEMKRRNSRVLIFTQMTRTLD 397
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ +R+Y Y R+DGS A ER AI F+ +++ + F+F++STRAG
Sbjct: 398 ILEDYCTMREYEYRRIDGSTSAAERGEAIDEFNAENS-----------EIFIFLLSTRAG 446
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQ+D QA RAHRIGQ V +TE T+EE I+ RA
Sbjct: 447 GLGINLATADIVIMYDSDWNPQIDLQAQDRAHRIGQTKQVFVFKFITESTIEEKIIYRAL 506
Query: 480 RKLRLSHNVVGDDV 493
+KL+L +V +++
Sbjct: 507 KKLKLDEILVKNNL 520
>gi|242015095|ref|XP_002428209.1| Chromo domain protein, putative [Pediculus humanus corporis]
gi|212512770|gb|EEB15471.1| Chromo domain protein, putative [Pediculus humanus corporis]
Length = 1795
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 202/535 (37%), Positives = 294/535 (54%), Gaps = 72/535 (13%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+ +Q++GL+WL+ + + +L DEMGLGKT+Q I FL YL + GPFL++ PL
Sbjct: 433 QLRDYQLDGLNWLVHSWCKENSAILADEMGLGKTIQTICFLYYLFRTHQVYGPFLLVVPL 492
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + + P++ + Y+G+ R IR + H + L + +LTT
Sbjct: 493 STMTSWQREFSLWAPEMNFVIYLGDVNSRNIIRDYEWWH-------TGTKRLKINAVLTT 545
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ FL I W ++DEA RLKN S+LY L E F RLL+TGTP+QN+L
Sbjct: 546 YEIVLKDKAFLGCISWAALLVDEAHRLKNDDSLLYKALTE-FDTNHRLLITGTPLQNSLK 604
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F F + H +A K + L L F+LRR K+
Sbjct: 605 ELWALLHFIMPDKFAKWEDF-----EREHDHTAQK------GYAKLHAQLEPFILRRVKK 653
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRK---------------------ELPK--- 309
+ + + + E++ LQK+ Y IL K EL K
Sbjct: 654 DVEKSLPSKVEQILRVEMSSLQKQYYKWILTKNYSALRKGVKGSTTTFNNIVIELKKCCN 713
Query: 310 --LLALSSRTANHQSLQNT------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
L S T N + ++ SGKLV+LD LL +L + HRVL+F+QM + LDIL
Sbjct: 714 HAFLTKPSETENKSNEADSLQMLLRGSGKLVLLDKLLVRLKETNHRVLIFSQMVRMLDIL 773
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
++L+LR++ ++RLDGSI+ E R A+ HF+ +++++ F F++STRAGG+
Sbjct: 774 AEYLQLRRFQFQRLDGSIKGEIRKQALDHFNAENSMD-----------FCFLLSTRAGGL 822
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+++VEE I+ RA++K
Sbjct: 823 GINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIIERAKKK 882
Query: 482 LRLSHNVV------GDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNEE 528
+ L H V+ G V+D++ T DL +I+ FG LF + +EE
Sbjct: 883 MVLDHLVIQRMDTTGRTVLDKKGSSVTPFNKGDLTAILKFGAEELFKDEEDGDEE 937
>gi|357480785|ref|XP_003610678.1| Chromatin remodeling complex subunit [Medicago truncatula]
gi|355512013|gb|AES93636.1| Chromatin remodeling complex subunit [Medicago truncatula]
Length = 1063
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 180/491 (36%), Positives = 271/491 (55%), Gaps = 66/491 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+P+Q+EGL W++ + +N +L DEMGLGKT+Q IS +++L + GPFL++ P
Sbjct: 361 GELRPYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAHLMEYKGVTGPFLIVAP 420
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
+V WV+E A + P + + Y G ++R+ I+ + K F+VLLT
Sbjct: 421 KAVLPNWVNEFATWAPSITAVLYDGRMDERKAIKEEISGEGK------------FNVLLT 468
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
YD+++ D+ FL +I W Y I+DE RLKN L L + + RRLL+TGTPIQN+L
Sbjct: 469 HYDLIMRDKAFLKKIHWKYLIVDEGHRLKNHECALARTLDNSYHIERRLLLTGTPIQNSL 528
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTS---------LKGIL 265
ELW+L++F +P++F ++ F F +AP ++ T L ++
Sbjct: 529 QELWSLLNFLLPNIFNSVQNFEDWF-------NAPFADRVDVSLTDEEQLLIIRRLHQVI 581
Query: 266 SAFMLRRTKQKLVEC--GHLMLPPLTEITVLQKKVYASIL-------------RKELPKL 310
F+LRR K ++ + G + +++ QK Y + K L L
Sbjct: 582 RPFILRRKKAEVEKFLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDYGSGKSKSLQNL 641
Query: 311 LALSSRTANHQSL--QN----------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L N ASGK +LD LL KL +GHRVLLF+QMT+ +
Sbjct: 642 TMQLRKCCNHPYLFVGNYDIYRREEIVRASGKFELLDRLLPKLRRAGHRVLLFSQMTRLM 701
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+ +L+L Y + RLDGS + EER + ++ F+ A + F+F++STRA
Sbjct: 702 DILEVYLQLHDYKFLRLDGSTKTEERGSLLKKFN-----------APDSPYFMFLLSTRA 750
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ V LV+ ++EEVI+ RA
Sbjct: 751 GGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERA 810
Query: 479 ERKLRLSHNVV 489
++K+ + V+
Sbjct: 811 KQKMGIDAKVI 821
>gi|134117101|ref|XP_772777.1| hypothetical protein CNBK1510 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255395|gb|EAL18130.1| hypothetical protein CNBK1510 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1409
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 207/595 (34%), Positives = 315/595 (52%), Gaps = 96/595 (16%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK +QV+GL W+I Y +N +L DEMGLGKT+Q IS ++YL + PGPFLV+ PLS
Sbjct: 545 LKDYQVKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIVPLS 604
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E ++ P + L G +RR Y ++ + F V LTTY
Sbjct: 605 TLTNWTMEFERWAPAVRTLILKGSPA----VRREAYPRLRA---------IDFQVCLTTY 651
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ ++ ++ LS+I W + IIDE R+KN S L L E++ RL++TGTP+QNNL E
Sbjct: 652 EYIIKERPLLSRIKWIHMIIDEGHRMKNVKSKLSQTLNEYYSSRYRLILTGTPLQNNLPE 711
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSAFMLR 271
LWAL++F +P +F ++ F F +A +++ ++ ++ E+ L +L F+LR
Sbjct: 712 LWALLNFVLPKIFNSVKSFDEWF-NAPFANTGGEKMEMNEEEALLVVKRLHKVLRPFLLR 770
Query: 272 RTKQKLVECGHLMLPP------LTEITVLQKKVYASILR-KELPKLLALSSRTANHQSLQ 324
R K K VE LP T+++ LQ K+Y S+ + K LP ++++ + Q+LQ
Sbjct: 771 RLK-KDVES---ELPDKVEKVIYTKMSALQWKLYESVQKYKTLPTDMSVA-KPQKRQNLQ 825
Query: 325 NT---------------------------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
N +GK +LD +L KL+ +GH+VL+F
Sbjct: 826 NALMQLRKICNHPYVFREVDEDFTVGNTTDEQIIRVAGKFELLDRILPKLFKTGHKVLIF 885
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
QMT+ + I+ DF + R + Y RLDGS +AE+R + F+ ++ + V
Sbjct: 886 FQMTEIMTIVSDFFDFRGWKYCRLDGSTKAEDRQTLLSTFNDPNSPYQ-----------V 934
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+GLNL +ADTVI Y+ DWNP D QA RAHRIGQ V + L++ TVE
Sbjct: 935 FILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQDRAHRIGQKKEVRVLRLISSGTVE 994
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEESDD 531
E+++ RA+RKL + V+ D EV T E + L F + +NEE+++
Sbjct: 995 ELVLARAQRKLEIDGKVIQAGKFD-EVT--TGAEYEALLQKAFETSAEE----DNEETNE 1047
Query: 532 LRLSGLNSMVEK-------VIAMRHEQVSGK------AGRKFEVNPVALLEESDL 573
L LN ++ + AM +E+ K +G K E+ P L++ES+L
Sbjct: 1048 LDDDELNELLARGDNELGIFTAMDNERKERKIAEWRASGSKGEL-PPPLMQESEL 1101
>gi|328867660|gb|EGG16042.1| myb domain-containing protein [Dictyostelium fasciculatum]
Length = 1999
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 217/625 (34%), Positives = 321/625 (51%), Gaps = 104/625 (16%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +L+P+Q+EGL+WL + N +LGDEMGLGKT+Q++S + L+ GPFL
Sbjct: 456 FKNGNKLRPYQLEGLNWLSFCWHQRRNSMLGDEMGLGKTVQSVSIIETLRSVHGIRGPFL 515
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIR-RTMYEHVKEQSQMSNVSPLPF 149
+ PL+ W E +T + VL Y + R+ IR + + +NV+ F
Sbjct: 516 CIAPLTTIPHWKREFEAWTTQ-SVLVYHDTGDARQTIRDHEFFYPTANNKKNNNVTK--F 572
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+ L+TTY++++ D+ FLS+I W Y +IDEA RLKN S L N LR + LL+TGTP
Sbjct: 573 NTLITTYEMIISDRSFLSKINWKYVVIDEAHRLKNKSCRLTNELRT-YNYGHLLLLTGTP 631
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
IQNN ELW+L++F P F + ++FL F D K EQ T L+ +L ++
Sbjct: 632 IQNNTQELWSLLNFLQPEKFASCDEFLVEFGDL----------KQAEQVTKLQAVLKPYI 681
Query: 270 LRRTKQKLVECGHLMLPPLTEI--TVLQKKVYASILRKEL---------PKLLAL----- 313
LRR K+ + + + E+ T +QKK Y +I K P LL +
Sbjct: 682 LRRMKENVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLRKGGKGPSLLNIMMELR 741
Query: 314 -----------------------SSRTANHQSLQNT-------ASGKLVVLDLLLKKLYN 343
+ TA +S Q+ +SGKLV++D LL KL
Sbjct: 742 KCCNHPYLIKGAEKSEMADLQIKNGVTAAGKSAQDAVYERLIQSSGKLVLVDKLLPKLRA 801
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
GH+VL+F+QM LDIL D+L R Y +ER+DGSI+ +R AAI FS +
Sbjct: 802 GGHKVLIFSQMVMVLDILDDYLTYRGYPHERIDGSIKGNDRQAAIDRFSKK--------- 852
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
G+D+FVF++ T+AGG+G+NL AADTVI ++ DWNPQ D QA R HRIGQ V
Sbjct: 853 --GSDSFVFLLCTKAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYR 910
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDD--LRSIIFGLH 517
LVT +T E+++ RA +KL L V+ + +E +E ET D LR +G++
Sbjct: 911 LVTRNTYEKIMFDRASKKLSLDKVVLTKMNNSSNIPQEGEENPDKETIDSLLR---YGVY 967
Query: 518 LFDPKAINNEESDDLRL--SGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLM 575
AI ++E R ++ ++++ ++ E + +P+A +
Sbjct: 968 -----AIKDDEGASERFYEEDIDRILDRSTVVKQE----------DFDPLA-----NSFS 1007
Query: 576 HESFASATSYPDLDEASYRSWVEKF 600
SF S+TS D+D W +KF
Sbjct: 1008 TASFCSSTSTKDIDVMDPDFW-DKF 1031
>gi|323454538|gb|EGB10408.1| hypothetical protein AURANDRAFT_23375, partial [Aureococcus
anophagefferens]
Length = 685
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 195/546 (35%), Positives = 288/546 (52%), Gaps = 78/546 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++P+Q+EGL+W+IR G+N +L DEMGLGKTLQ+IS L +L ++ GP LVL
Sbjct: 121 IAGKMRPYQLEGLNWMIRLQEHGMNGILADEMGLGKTLQSISVLGWLAEAKGVKGPHLVL 180
Query: 93 CPLSVTDGWVSEMAKFTPK-LEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
P S W++E A++ P+ L+ +R+ G + +R R + + + +DV
Sbjct: 181 VPKSTLGNWMNEFARWCPEMLKAVRFHGSKPEREAFVRDVLKPGCAPGERD------WDV 234
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
+TTY+V + L ++ W + IIDEA R+KN +S+ R RRLL+TGTP+Q
Sbjct: 235 CVTTYEVANAEARALEKLSWRFVIIDEAHRIKNEASLFARTARS-LRAERRLLVTGTPLQ 293
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NNL ELWAL++F +P VF + +QF F V A K T L +L F+LR
Sbjct: 294 NNLHELWALLNFLLPDVFASSDQFDEWFDLDVEDEDAK-----KTMITQLHKLLRPFVLR 348
Query: 272 RTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQSLQN 325
R K + + LPP TE ++V QK+VY S+L+++ LLA +
Sbjct: 349 RLKVDVEKS----LPPKTETILFTGLSVSQKQVYKSLLKRD-ASLLAGPEAGGDRAG--- 400
Query: 326 TASGKLVVLDLLLKKLYN---------------------------------------SGH 346
+ K+ + + L+K N GH
Sbjct: 401 ASRAKMANIAMQLRKCCNHPYLFQGVEDRNLDPLGDHVVANCGKLVLLDKLLAKLKDRGH 460
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QMT LD+L+DF+ +R Y Y R+DG+ EER I ++ A
Sbjct: 461 RVLVFSQMTALLDVLEDFMAMRDYEYCRIDGNTSYEERDDLIEAYN-----------APN 509
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+D FVF++STRAGG+G+NL ADTV+ Y+ DWNPQ D QA+ RAHRIGQ V LVT
Sbjct: 510 SDKFVFLLSTRAGGLGINLQTADTVVLYDSDWNPQADLQAMDRAHRIGQKKPVHVYRLVT 569
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDD-LRSIIFGLHLFDPKAIN 525
+T+EE I+ RA++KL+L VV ++ KE D+ L ++ FG +
Sbjct: 570 ANTIEEKIVERAKKKLKLDAMVVQQGRLNNAKKELQGPSKDEMLEAVTFGASAIFRSGDS 629
Query: 526 NEESDD 531
N+ +DD
Sbjct: 630 NDVTDD 635
>gi|452000190|gb|EMD92652.1| hypothetical protein COCHEDRAFT_1100498 [Cochliobolus heterostrophus
C5]
Length = 1373
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 192/563 (34%), Positives = 289/563 (51%), Gaps = 84/563 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL + PGP+LV+
Sbjct: 535 VGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKRQPGPYLVI 594
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W +E K+ P + + Y G R+ Y+ Q F VL
Sbjct: 595 VPLSTLTNWTNEFEKWAPSVSKIVYKGPPNARKQ-----YQQQIRWGQ--------FQVL 641
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS+I W + I+DE R+KN S L + +++ RL++TGTP+QN
Sbjct: 642 LTTYEFIIKDRPILSKIKWVHMIVDEGHRMKNAGSKLSMTITQYYSTRYRLILTGTPLQN 701
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL+ELWA+++F +P++F + F F ++ + ++ E+ L +L
Sbjct: 702 NLTELWAMLNFVLPTIFKSATSFDEWFNTPFANTGGQDKMELTEEEQLLVIRRLHKVLRP 761
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR----------------K 305
F+LRR K+ + + LP TE + LQ K+Y ++ +
Sbjct: 762 FLLRRLKRDVEKD----LPDKTERVIKCNFSTLQAKLYKQLVTHNRLMVSDGKGGKTGMR 817
Query: 306 ELPKLLALSSRTANH-----------------QSLQNTASGKLVVLDLLLKKLYNSGHRV 348
L +L + NH L ++GK +LD +L K +GHRV
Sbjct: 818 GLSNMLMQLRKLCNHPFVFEEVEDVINPTKGTNDLLWRSAGKFELLDRILPKFQATGHRV 877
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F QMTQ ++I++D+L LR Y RLDG+ +A++R +R F+ A +
Sbjct: 878 LMFFQMTQIMNIMEDYLRLRGMQYLRLDGATKADDRSDLLRLFN-----------APDSP 926
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V + L+T +
Sbjct: 927 YFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSN 986
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEE 528
+VEE I+ RA KL + V+ D + K DD R + + L +A + E
Sbjct: 987 SVEEKILERANYKLDMDGKVIQAGKFDNKSK-------DDERDAMLRIMLESAEAAESLE 1039
Query: 529 SDDLRLSGLNSMVEKVIAMRHEQ 551
+++ LN I MRHE+
Sbjct: 1040 QEEMDDDDLNQ-----IMMRHEE 1057
>gi|440492849|gb|ELQ75382.1| Chromatin remodeling complex WSTF-ISWI, small subunit
[Trachipleistophora hominis]
Length = 833
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 265/494 (53%), Gaps = 69/494 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ L+ +Q+EG++WLI + +N +L DEMGLGKTLQ I+FL YLK + P L++
Sbjct: 63 IRGTLREYQIEGVNWLISMHEKNINCILADEMGLGKTLQTITFLGYLKSFLKNDTPHLLI 122
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S+ W +E KF P + + HV+ + + +DV+
Sbjct: 123 VPKSLLHNWKAEFKKFLPSFRLFTFHAS-------------HVEIKEMEETMENTNYDVV 169
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TTY++ + + +I WCY +IDEA R+KN +S+L ++R F RLL+TGTP+QN
Sbjct: 170 ITTYEMCISAKKVFQRIQWCYLVIDEAHRIKNEASLLSKIVR-IFRCEHRLLLTGTPLQN 228
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
N+ ELWAL++F P +F QF + + +G I + L+ +L F LRR
Sbjct: 229 NVHELWALLNFLDPKLFKDPEQF----EKWITQMENDNKGGIDQ----LRKVLQLFFLRR 280
Query: 273 TKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKELPKLLALSS------------ 315
K+ + +LP ++T +Q+ +Y IL K+L LL
Sbjct: 281 EKR---DVEKTLLPKKVINLYPQLTAMQRNLYKMILEKDLTPLLHKREIKSSLLNVVIQL 337
Query: 316 -RTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + SGK+V LD LL ++ RVL+F QMT+ LD
Sbjct: 338 RKCCNHPYLFDGMEPGPPYTTDEHLVYNSGKMVYLDKLLTEMKRRNSRVLIFTQMTRMLD 397
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ +R+Y Y R+DGS A ER AI F+ +++ D FVF++STRAG
Sbjct: 398 ILEDYCTMREYEYRRIDGSTSAAERGEAIDDFNAENS-----------DVFVFLLSTRAG 446
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQ+D QA RAHRIGQ V +TE+T+EE I+ RA
Sbjct: 447 GLGINLATADIVIMYDSDWNPQIDLQAQDRAHRIGQTKQVFVFKFITENTIEEKIIYRAL 506
Query: 480 RKLRLSHNVVGDDV 493
+KL+L +V +++
Sbjct: 507 KKLKLDEILVKNNL 520
>gi|330799785|ref|XP_003287922.1| hypothetical protein DICPUDRAFT_55110 [Dictyostelium purpureum]
gi|325082056|gb|EGC35551.1| hypothetical protein DICPUDRAFT_55110 [Dictyostelium purpureum]
Length = 1271
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 269/491 (54%), Gaps = 63/491 (12%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LKP+Q++GL W++ Y +N +L DEMGLGKT+Q I+ +SYL + + GP+LV+ P
Sbjct: 261 GKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSYLIEVKKNNGPYLVVVP 320
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W E AK+ PK++ + Y G++ R++ YE +SP F+V++T
Sbjct: 321 LSTLTNWGQEFAKWAPKIKAVLYYGDKP----TRKSRYEE--------EISPGQFNVVVT 368
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ ++ D+ L +I W Y IIDE R+KN +S L +L ++ RLL+TGTP+QN+L
Sbjct: 369 TYEYIIKDKNQLCKIKWNYLIIDEGHRMKNYTSKLSVILGTNYHSRYRLLLTGTPLQNSL 428
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF---TSLKGILSAFMLR 271
ELWAL++F +P++F + F F + +EQ L +L F+LR
Sbjct: 429 PELWALLNFLLPNIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQLLIIQRLHKVLRPFLLR 488
Query: 272 RTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQSLQN 325
R K+++ LP E ++ Q+K+Y I K L + L+N
Sbjct: 489 RLKKEV----EAQLPDKVEKVLKCDMSAFQQKMYDLIKDKGFTAGSGLDGNPKLAKGLKN 544
Query: 326 TA---------------------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
T +GK +LD LL KL +GHRVL+F+QMTQ +
Sbjct: 545 TYVQLRKICNHPYLFYDEEYPIDDNLIRYAGKFDLLDRLLPKLKAAGHRVLIFSQMTQLI 604
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
+IL+ F R + Y RLDGS ++EER ++ F+ A ++ F+F++STRA
Sbjct: 605 NILEVFFAYRDFKYLRLDGSTKSEERGPLLQLFN-----------APNSEYFIFVLSTRA 653
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+GLNL ADTVI ++ DWNPQ+D QA RAHRIGQ V + LVT H+VEE I+ RA
Sbjct: 654 GGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVRVLRLVTLHSVEENILARA 713
Query: 479 ERKLRLSHNVV 489
K L ++
Sbjct: 714 NFKKELDKKII 724
>gi|440792199|gb|ELR13427.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 2160
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 318/634 (50%), Gaps = 77/634 (12%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
++ EF L+ +Q+EGL+WL+ + N +L DEMGLGKT+Q+IS + +L +
Sbjct: 304 TESPEFKDGNRLRAYQLEGLNWLVFNWYQRRNSILADEMGLGKTVQSISTMWHLFTVEKI 363
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFLV+ PLS W E+ +T + V+ Y G R IR+ + ++ + + +
Sbjct: 364 RGPFLVIAPLSTIGHWKREVENWT-DMNVIVYHGSSAAREVIRKYEWNYLDAKGR-AIPG 421
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
++VL+TTY+++L D L I W YT+IDEA RLKN +S L L + + LL+
Sbjct: 422 LFKWNVLVTTYEMILADSALLKTIDWRYTVIDEAHRLKNKNSKLLIEL-QTYSFSDILLL 480
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGIL 265
TGTP+QNN ELW+L++F P F + F++ F D K +Q L +L
Sbjct: 481 TGTPLQNNTEELWSLLNFLDPEKFHSSEDFMTDFGDL----------KQTQQVQGLHDLL 530
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEI--TVLQKKVYASILRKE------------LPKLL 311
+LRR K+ + + + E+ TV QKK Y +I K +P +L
Sbjct: 531 KPHLLRRMKEHVEKSIAPKEETIVEVELTVTQKKYYKAIYEKNTAFLTKGCSGGNVPNML 590
Query: 312 ALS---SRTANHQSLQN---------------------TASGKLVVLDLLLKKLYNSGHR 347
+ + NH L N +SGKLV++D LL KL + GH+
Sbjct: 591 NIMMQLRKCCNHPYLINGVESQILNGLSDPESIYQMLIKSSGKLVLIDKLLPKLISGGHK 650
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL+D+L RK++YER+DG +R +R AAI F + G+
Sbjct: 651 VLIFSQMVRVLDILEDYLNFRKFTYERIDGGVRGNDRQAAIDRFCKK-----------GS 699
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
D VF++ TRAGGVG+NL AADTVI ++ DWNPQ D QA R HRIGQ V L+T
Sbjct: 700 DRNVFLLCTRAGGVGINLTAADTVIIFDSDWNPQNDIQAQARCHRIGQTQMVKVYRLITR 759
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETD-DLRSI--IFGLHLFDPKAI 524
T E + RA KL L V+G +RE ++ E D + I + +D
Sbjct: 760 GTYERHMFERASLKLGLDQAVLGKMAENREDEKAGGEEKKLDKKEIDALLKYGAYDVFRE 819
Query: 525 NNEESDDLRLSGLNSMVEK-VIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASAT 583
+E + ++ ++E+ ++ E G+ G A SF SA+
Sbjct: 820 GQDEGEQYYEEDIDKILERSSFTLKPESQGGEPGGALSAFSKA-----------SFCSAS 868
Query: 584 SYPDLDEASYRSWVEKFKEASESSSNTIAESGRR 617
S PD+D W + EA+++ + ++G R
Sbjct: 869 SAPDVDLDDPDFWKKILPEAAQNVPDPSIQTGSR 902
>gi|238879188|gb|EEQ42826.1| chromo domain protein 1 [Candida albicans WO-1]
Length = 1410
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 197/560 (35%), Positives = 303/560 (54%), Gaps = 84/560 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q ++FLS+L +++ GP L
Sbjct: 356 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHL 415
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP-F 149
V+ PLS W K+ P + + Y+G E R+ IR + ++ N + P F
Sbjct: 416 VVVPLSTVPAWQETFEKWAPDVNCVYYLGNGEARKTIR---------EYELYNQNRKPKF 466
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ +L D+ L W + +DEA RLKN S LY L+ F + RLL+TGTP
Sbjct: 467 NVLLTTYEYILKDKNELGAFKWQFLAVDEAHRLKNAESSLYEALK-GFKVSNRLLITGTP 525
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF-TSLKGILSAF 268
+QNN+ EL AL +F MP F T++Q + + + S +EQ+ L+ +S F
Sbjct: 526 LQNNVKELAALCNFLMPGKF-TIDQEIDF--ETIDSE--------QEQYIKDLQKKISPF 574
Query: 269 MLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALS-------- 314
+LRR K+ + + LP +E ++ +Q + Y +I+ K L A +
Sbjct: 575 ILRRLKKDVEKS----LPSKSERILRVELSDIQTEYYKNIITKNYAALNAGNRGSQISLL 630
Query: 315 ------SRTANH-----------------QSLQNT------ASGKLVVLDLLLKKLYNSG 345
+ +NH S +NT +SGK+V+L+ LL +L G
Sbjct: 631 NIMSELKKASNHPYLFDGAEDKVLDKAGSSSRENTLKGIVMSSGKMVLLEQLLSRLRKEG 690
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
HRVL+F+QM + LDIL D++ ++ Y ++RLDG++ + +R AI HF+ A
Sbjct: 691 HRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKRKIAIDHFN-----------AP 739
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
G+ F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV V
Sbjct: 740 GSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFV 799
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVE--TDDLRSII-FGLHLFDPK 522
++ TVEE I+ RA +K+ L + ++ + D K + E T++L I+ FG +
Sbjct: 800 SKDTVEEQILERARKKMVLEYAIISLGITDPSAKNGSKTEPSTNELSQILKFGAGTMFKE 859
Query: 523 AINNEESDDLRLSGLNSMVE 542
N ++ ++L L + S E
Sbjct: 860 NNNQQKLENLNLDDVLSHAE 879
>gi|357134639|ref|XP_003568924.1| PREDICTED: probable chromatin-remodeling complex ATPase chain-like
[Brachypodium distachyon]
Length = 1101
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 197/531 (37%), Positives = 293/531 (55%), Gaps = 73/531 (13%)
Query: 22 GQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKF 81
G T + A + +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL
Sbjct: 214 GGTRLLAQPSCINGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHE 273
Query: 82 SQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM 141
+ GP +V+ P S W+ E+A+F P L ++++G E+R +IR +
Sbjct: 274 FRGITGPHMVVAPKSTLGNWMKEIARFCPILRAVKFLGNPEERNHIRENL---------- 323
Query: 142 SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
++P FDV +T++++ + ++ L + W Y IIDEA R+KN +S+L +R F
Sbjct: 324 --LAPGKFDVCVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNY 380
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSL 261
RLL+TGTP+QNNL ELW+L++F +P +F + TF + S + ++ +Q L
Sbjct: 381 RLLITGTPLQNNLHELWSLLNFLLPEIFSSA----ETFDEWFQISGENDQHEVVQQ---L 433
Query: 262 KGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS 315
+L F+LRR K VE G LPP E ++ +QK+ Y ++L+K+L + A
Sbjct: 434 HKVLRPFLLRRLKSD-VEKG---LPPKKETILKVGMSEMQKQYYRALLQKDLEVINAGGE 489
Query: 316 R------------TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRV 348
R NH L A +GK+V+LD LL KL RV
Sbjct: 490 RKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMVLLDKLLPKLKARDSRV 549
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QMT+ LDIL+D+L R Y Y R+DG+ ++R A+I F+ G++
Sbjct: 550 LIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDDRDASIEAFN-----------KPGSE 598
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
FVF++STRAGG+G+NL AD V+ Y+ DWNPQVD QA RAHRIGQ V TE+
Sbjct: 599 KFVFLLSTRAGGLGINLATADIVVLYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEY 658
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL 518
T+EE ++ RA +KL L V+ + E+ AV D+L ++ FG +
Sbjct: 659 TIEEKVIERAYKKLALDALVIQQG----RLAEQKAVNKDELLQMVRFGAEM 705
>gi|66359998|ref|XP_627177.1| SNF2L ortholog with a SWI/SNF2 like ATpase and a Myb domain
[Cryptosporidium parvum Iowa II]
gi|46228591|gb|EAK89461.1| SNF2L ortholog with a SWI/SNF2 like ATpase and a Myb domain
[Cryptosporidium parvum Iowa II]
Length = 1308
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 209/591 (35%), Positives = 310/591 (52%), Gaps = 101/591 (17%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+T ++K +Q+EGL+W+ + Y +N +L DEMGLGKTLQ IS L +LK + GP ++L
Sbjct: 160 ITGKMKFYQLEGLNWMFQLYKHNINGILADEMGLGKTLQTISILGFLKSTFKVEGPHIIL 219
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI------------RRTMY-------- 132
P S D W E+ ++ P L V++ G+R+ R I T+Y
Sbjct: 220 TPRSTLDNWFCELKRWCPSLRVVKLHGDRQLRDEIFSSLLFPGSKVSAGTLYCNESNEPA 279
Query: 133 ---EHVKEQSQMSNVSP-----------LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDE 178
E E Q S P L ++V LTT+++ + ++ L +I W Y I+DE
Sbjct: 280 EDEEKDVELRQNSEERPTFANFDYNDGNLHYNVCLTTFEMAIKEKWRLQKISWKYCILDE 339
Query: 179 AQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLST 238
A R+KN S+L V+R RLL+TGTP+QNNL ELW+L++F MP++F + F S
Sbjct: 340 AHRIKNEKSLLSEVVR-LLKSKNRLLITGTPLQNNLRELWSLLNFLMPNLFSSSEDFESL 398
Query: 239 FKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV----- 293
F + S ++ IK +L IL FMLRR K + LPP E+ V
Sbjct: 399 FDFSKLESDDQQKCVIK----TLHQILRPFMLRRLKADV----ERDLPPKRELYVYIGLS 450
Query: 294 -LQKKVYASILRKELPKLLALSS-------------RTANHQSLQN-------------- 325
LQKK+Y+ +L + L L + SS +T NH L +
Sbjct: 451 KLQKKIYSELLTRNLDVLNSASSNKTQMLNLLMQLRKTCNHPYLFDGVEPGPPYVEGFHM 510
Query: 326 -TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEER 384
ASGK+V+L LL KL++ G RVLLF+QMT+ LDI+ D+L Y Y R+DGS ER
Sbjct: 511 VEASGKMVLLHKLLPKLFSQGSRVLLFSQMTRLLDIIDDYLRWCGYPYCRIDGSTPGIER 570
Query: 385 FAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 444
I F+ + G++ +F++STRAGG+G+NL AD VI ++ D+NPQ+D
Sbjct: 571 QERIDIFNKE-----------GSEKLIFLLSTRAGGIGINLATADVVILFDSDFNPQMDL 619
Query: 445 QALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAV 504
QA+ RAHRIGQ V VTE TVEE I+ RA +KL+L ++ ++ +A
Sbjct: 620 QAMDRAHRIGQKKPVTVYRFVTEKTVEERIVERAAKKLKLDSLIIQQGLISN--ASHSAP 677
Query: 505 ETDDLRSII-FG----LHLFDPKAINNEESDDL------RLSGLNSMVEKV 544
+ +L +I FG H D ++ +E+ D + R + +N+ ++K+
Sbjct: 678 DNRELHEMIQFGAQEVYHTRDSSSVTDEDIDTILAAAQERTNEMNAKMKKL 728
>gi|321263831|ref|XP_003196633.1| chromatin structure remodeling complex protein STH1 [Cryptococcus
gattii WM276]
gi|317463110|gb|ADV24846.1| Chromatin structure remodeling complex protein STH1, putative
[Cryptococcus gattii WM276]
Length = 1430
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 226/684 (33%), Positives = 349/684 (51%), Gaps = 116/684 (16%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK +QV+GL W+I Y +N +L DEMGLGKT+Q IS ++YL + PGPFLV+ PLS
Sbjct: 566 LKDYQVKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIVPLS 625
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E ++ P + L G +RR Y ++ + F V LTTY
Sbjct: 626 TLTNWTMEFERWAPAVRTLILKGSPA----VRREAYPRLR---------AVDFQVCLTTY 672
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ ++ ++ LS+I W + IIDE R+KN S L L E++ RL++TGTP+QNNL E
Sbjct: 673 EYIIKERPLLSRIKWIHMIIDEGHRMKNVKSKLSQTLNEYYSSRYRLILTGTPLQNNLPE 732
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSAFMLR 271
LWAL++F +P +F ++ F F +A +++ ++ ++ E+ L +L F+LR
Sbjct: 733 LWALLNFVLPKIFNSVKSFDEWF-NAPFANTGGEKMEMNEEEALLVVKRLHKVLRPFLLR 791
Query: 272 RTKQKLVECGHLMLPP------LTEITVLQKKVYASILR-KELPKLLALSSRTANHQSLQ 324
R K K VE LP T+++ LQ K+Y S+ + K LP ++++ + Q+LQ
Sbjct: 792 RLK-KDVES---ELPDKVEKVIYTKMSALQWKLYESVQKYKTLPTDMSVA-KPQKRQNLQ 846
Query: 325 NT---------------------------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
N +GK +LD +L KL+ +GH+VL+F
Sbjct: 847 NALMQLRKICNHPYVFREVDEDFTVGNTTDEQIIRVAGKFELLDRILPKLFKTGHKVLIF 906
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
QMT+ + I+ DF + R + Y RLDGS +AE+R + F+ ++ + V
Sbjct: 907 FQMTEIMTIVSDFFDYRGWKYCRLDGSTKAEDRQTLLSTFNDPNSPYQ-----------V 955
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+GLNL +ADTVI Y+ DWNP D QA RAHRIGQ V + L++ TVE
Sbjct: 956 FILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQDRAHRIGQKKEVRVLRLISSGTVE 1015
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEESDD 531
E+++ RA+RKL + V+ D EV T E + L F D +NEE+++
Sbjct: 1016 ELVLARAQRKLEIDGKVIQAGKFD-EVT--TGAEYEALLQKAFETSAED----DNEETNE 1068
Query: 532 LRLSGLNSMVEK-------VIAMRHEQVSGK------AGRKFEVNPVALLEESDLL---- 574
L LN ++ + M +E+ K +G K E+ P L++ES+L
Sbjct: 1069 LDDDELNELLARGDNELDIFTEMDNERKERKLADWRASGGKGEL-PPPLMQESELPPFYR 1127
Query: 575 ------MHESFAS----ATSYPDLDEASYRSWV--EKFKEASESSSNTIAESGRRRSPED 622
M E A+ + E Y + ++F A E+S + + ++ R+
Sbjct: 1128 RDIGQEMAEELANEEEQGRGRRNKGEVRYTDGLTDDQFIAALENSDDDVEDAADRK---- 1183
Query: 623 KQRKLEAARRKAEEKKLAKWEANG 646
++R + A RK + LA+ EA G
Sbjct: 1184 RKRAEKKAERKRMNEVLAQAEAEG 1207
>gi|340372667|ref|XP_003384865.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Amphimedon queenslandica]
Length = 1669
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 188/515 (36%), Positives = 275/515 (53%), Gaps = 70/515 (13%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+ +Q++G++WL+ + +V+L DEMGLGKT+Q ISFLS L GP+LV+ PL
Sbjct: 594 QLRDYQLDGVNWLVSSWCKNNSVILADEMGLGKTIQTISFLSSLFHIYNLYGPYLVVVPL 653
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + + P + L Y+G+ R+ I+ T + H + F+V++TT
Sbjct: 654 STLPSWQREFSLWAPSMNTLVYIGDVTSRKMIQDTEWAHAN--------GNIKFNVVITT 705
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL + W ++DEA RLKN S+LY L F RLL+TGTP+QN+L
Sbjct: 706 YEILLKDKDFLGDVSWAVLVVDEAHRLKNDDSLLYKTL-NMFHTNHRLLVTGTPLQNSLK 764
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELW+L+HF M F + +F K A H +SL L ++LRR K+
Sbjct: 765 ELWSLIHFIMKDKFPSWEEFEEEHK-AYHEGDT-------SNLSSLHQQLEPYLLRRIKK 816
Query: 276 KLVECGHLMLPP------LTEITVLQKKVYASILRKELPKL--------------LALSS 315
+ + LP E++ +QK+ Y IL + L L
Sbjct: 817 DVEKS----LPSKVEQILRVEMSSVQKQYYRWILTRNYKALSKGVKGSITGFINVLMELK 872
Query: 316 RTANHQSLQNT---------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
+ NH + T SGKL +LD LL +L GHRVL+F+QM + LDI
Sbjct: 873 KCCNHVYIVRTPDTPEVKDPLQSLLRGSGKLYLLDKLLVRLKEKGHRVLIFSQMVRMLDI 932
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L ++++ R + Y+RLDGSI ++R +I HF+ A G+ F F++STRAGG
Sbjct: 933 LAEYMKFRHFLYQRLDGSITGQQRKESIDHFN-----------AEGSQDFCFLLSTRAGG 981
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTV+ ++ DWNPQ D QA RAHRIGQ V VT ++VEE I+ RA+R
Sbjct: 982 LGVNLATADTVVIFDSDWNPQNDLQAQARAHRIGQTKQVNIYRFVTRNSVEEDIIERAKR 1041
Query: 481 KLRLSHNVVGD-DVVDREVKERTAVETDDLRSIIF 514
K+ L H V+ D R + T +D R++ F
Sbjct: 1042 KMVLDHLVIQRMDTTGRTILSHTT--SDQGRNVPF 1074
>gi|326478017|gb|EGE02027.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97]
Length = 1113
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 290/543 (53%), Gaps = 79/543 (14%)
Query: 11 AKIIHDNDERDGQTPV---DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLG 67
A+++ D ++R G+T + F E++ +Q+ GL+WL+ + G++ +L DEMGLG
Sbjct: 163 AELLKD-EKRGGKTETVFQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLG 221
Query: 68 KTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI 127
KTLQ ISFL YL+ GP LV P S D W E K+TP + VL G +++R +
Sbjct: 222 KTLQTISFLGYLRHICGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQL 281
Query: 128 RRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSS 187
+ E + ++ FDV +T+Y+++L ++ L + W Y IIDEA R+KN S
Sbjct: 282 ---INERLVDEK---------FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEES 329
Query: 188 VLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSS 247
L ++R F RLL+TGTP+QNNL ELWAL++F +P VFG F D S+
Sbjct: 330 SLSQIIR-VFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAF-----DQWFSNQ 383
Query: 248 APKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYAS 301
+ + +Q L +L F+LRR K + + L P E+ + +Q K Y
Sbjct: 384 EADQDTVVQQ---LHRVLRPFLLRRVKSDVEKS----LLPKKELNLYVGMSEMQVKWYQK 436
Query: 302 ILRKEL-------------PKLLALS---SRTANHQSLQNTA---------------SGK 330
IL K++ +LL + + NH L A SGK
Sbjct: 437 ILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIDNSGK 496
Query: 331 LVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRH 390
+V+LD LL +L+ G RVL+F+QM++ LDIL+D+ R + Y R+DGS E+R AI
Sbjct: 497 MVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDRIQAIDE 556
Query: 391 FSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA 450
++ G+ FVF+++TRAGG+G+NL AD VI ++ DWNPQ D QA+ RA
Sbjct: 557 YN-----------RPGSKKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRA 605
Query: 451 HRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLR 510
HRIGQ V+ +TE +EE ++ RA +KLRL V+ ++ K A ++L
Sbjct: 606 HRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQQQAK--NAASKNELL 663
Query: 511 SII 513
S+I
Sbjct: 664 SMI 666
>gi|294659674|ref|XP_462077.2| DEHA2G12496p [Debaryomyces hansenii CBS767]
gi|199434146|emb|CAG90563.2| DEHA2G12496p [Debaryomyces hansenii CBS767]
Length = 1405
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 197/549 (35%), Positives = 289/549 (52%), Gaps = 79/549 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q +SFLS+L +++ GP L
Sbjct: 350 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPHL 409
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W K++P L + Y+G E RRN+R YE + N P F+
Sbjct: 410 VVVPLSTVPAWQETFEKWSPDLNCIYYLGNTESRRNLRN--YEFYQ-----GNNKP-KFN 461
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
+LLTTY+ +L D+ L I W + +DEA RLKN S LY L+ F + RLL+TGTP+
Sbjct: 462 ILLTTYEYILKDRNELGAIKWQFLAVDEAHRLKNAESSLYESLK-SFKVTNRLLITGTPL 520
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNN+ EL AL +F MP F + S + IK+ L+ + F+L
Sbjct: 521 QNNIKELAALCNFLMPGKFNIEQEI------DFESPDDQQEQYIKD----LQKKIQPFIL 570
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS---------- 314
RR K+ + + LP T E++ LQ Y +I+ K L A +
Sbjct: 571 RRLKKDVEKS----LPSKTERILRVELSDLQTDYYKNIITKNYSALNAGNKGSQISLLNV 626
Query: 315 ----SRTANHQSLQNTA-----------------------SGKLVVLDLLLKKLYNSGHR 347
+ +NH L + A SGK+V+L+ LL +L GHR
Sbjct: 627 MSELKKASNHPYLFDGAEERALAKANSNARDNVLRGIIMSSGKMVLLEQLLTRLKKEGHR 686
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D+L ++ Y ++RLDG I + +R +I HF+ A +
Sbjct: 687 VLIFSQMVRMLDILGDYLSIKGYQFQRLDGGIPSSQRRISIDHFN-----------APDS 735
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV V++
Sbjct: 736 KDFAFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVSK 795
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVD-REVKERTAVETDDLRSII-FGLHLFDPKAIN 525
TVEE I+ RA +K+ L + ++ + D K +T ++L I+ FG + N
Sbjct: 796 DTVEEEILERARKKMILEYAIISLGITDPSSTKSKTEPSANELTQILKFGAGNMFRENDN 855
Query: 526 NEESDDLRL 534
++ +DL L
Sbjct: 856 QKKLEDLNL 864
>gi|357125031|ref|XP_003564199.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like
[Brachypodium distachyon]
Length = 1334
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 285/561 (50%), Gaps = 96/561 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
EF L P+Q+EGL++L + + V+LGDEMGLGKT+Q+I+FL+ + S+ + GP
Sbjct: 272 EFLSGGTLHPYQLEGLNFLRYSWSINKRVILGDEMGLGKTIQSIAFLASV--SEDNFGPH 329
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY------------EHVKE 137
LV+ PLS W E A + P++ V+ Y G R NIR+ + +
Sbjct: 330 LVVAPLSTLRNWEREFATWAPQMNVVMYSGSSAARENIRKYEFYFPKDKPKKLKKKKSSS 389
Query: 138 QSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHF 197
+ S + FDVLLT+Y+++ MD L I W I+DE RLKN S L+ +L++ +
Sbjct: 390 SNDEKKQSRIKFDVLLTSYEMINMDSAVLKTIEWECMIVDEGHRLKNKDSKLFGLLKD-Y 448
Query: 198 LMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ 257
R+L+TGTP+QNNL EL+ LMHF FG++ FKD +Q
Sbjct: 449 PTQHRVLLTGTPVQNNLDELFMLMHFLEGETFGSIADLQEEFKDINQD----------KQ 498
Query: 258 FTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELPKLL 311
L G+L +LRR K+ +++ LPP E+T QK+ Y +IL K
Sbjct: 499 VEKLHGMLKPHLLRRFKKDVMK----DLPPKKELILRVELTSKQKEYYKAILTK---NYA 551
Query: 312 ALSSRTANHQSLQNT---------------------------------ASGKLVVLDLLL 338
LS R H SL N SGK+ +LD ++
Sbjct: 552 VLSRRGGGHVSLINVVMELRKLCCHGFMTDEPDTDPESPEEGLRRLLDCSGKMQLLDKMM 611
Query: 339 KKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIE 398
KL GHRVL+++Q LD+L+D+L R +SYER+DG I ER I F+ +++ +
Sbjct: 612 VKLKEQGHRVLIYSQFQHMLDLLEDYLSYRNWSYERIDGKIGGAERQIRIDRFNAKNSTK 671
Query: 399 RLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ N
Sbjct: 672 -----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNK 720
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLSHNVVG-------------DDVVDREVKERTAVE 505
V+ LV + T+EE +M+ ++K+ L H VVG DD++ KE +
Sbjct: 721 VMIYRLVCKGTIEERMMQLTKKKMVLEHLVVGRLTKASNVNQEELDDIIRHGSKELFDDD 780
Query: 506 TDDLRSIIFGLHLFDPKAINN 526
DD +H +D I+N
Sbjct: 781 NDDEAGKSLQIH-YDDTLIDN 800
>gi|326473172|gb|EGD97181.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818]
Length = 1113
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 194/543 (35%), Positives = 290/543 (53%), Gaps = 79/543 (14%)
Query: 11 AKIIHDNDERDGQTPV---DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLG 67
A+++ D ++R G+T + F E++ +Q+ GL+WL+ + G++ +L DEMGLG
Sbjct: 163 AELLKD-EKRGGKTETVFQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLG 221
Query: 68 KTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNI 127
KTLQ ISFL YL+ GP LV P S D W E K+TP + VL G +++R +
Sbjct: 222 KTLQTISFLGYLRHICGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQL 281
Query: 128 RRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSS 187
+ E + ++ FDV +T+Y+++L ++ L + W Y IIDEA R+KN S
Sbjct: 282 ---INERLVDEK---------FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEES 329
Query: 188 VLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSS 247
L ++R F RLL+TGTP+QNNL ELWAL++F +P VFG F D S+
Sbjct: 330 SLSQIIR-VFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAF-----DQWFSNQ 383
Query: 248 APKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYAS 301
+ + +Q L +L F+LRR K + + L P E+ + +Q K Y
Sbjct: 384 EADQDTVVQQ---LHRVLRPFLLRRVKSDVEKS----LLPKKELNLYVGMSEMQVKWYQK 436
Query: 302 ILRKEL-------------PKLLALS---SRTANHQSLQNTA---------------SGK 330
IL K++ +LL + + NH L A SGK
Sbjct: 437 ILEKDIDAVNGAQGNRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIDNSGK 496
Query: 331 LVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRH 390
+V+LD LL +L+ G RVL+F+QM++ LDIL+D+ R + Y R+DGS E+R AI
Sbjct: 497 MVILDKLLNRLFKQGSRVLIFSQMSRVLDILEDYCVFRGHEYCRIDGSTAHEDRIQAIDE 556
Query: 391 FSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA 450
++ G+ FVF+++TRAGG+G+NL AD VI ++ DWNPQ D QA+ RA
Sbjct: 557 YN-----------RPGSKKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRA 605
Query: 451 HRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLR 510
HRIGQ V+ +TE +EE ++ RA +KLRL V+ ++ K A ++L
Sbjct: 606 HRIGQTKQVVVFRFITEKAIEEKVLERAAQKLRLDQLVIQQGRAQQQAK--NAASKNELL 663
Query: 511 SII 513
S+I
Sbjct: 664 SMI 666
>gi|58260538|ref|XP_567679.1| hypothetical protein CNK02030 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229760|gb|AAW46162.1| hypothetical protein CNK02030 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1558
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 207/595 (34%), Positives = 315/595 (52%), Gaps = 96/595 (16%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK +QV+GL W+I Y +N +L DEMGLGKT+Q IS ++YL + PGPFLV+ PLS
Sbjct: 694 LKDYQVKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIEKKKQPGPFLVIVPLS 753
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E ++ P + L G +RR Y ++ + F V LTTY
Sbjct: 754 TLTNWTMEFERWAPAVRTLILKGSPA----VRREAYPRLRA---------IDFQVCLTTY 800
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ ++ ++ LS+I W + IIDE R+KN S L L E++ RL++TGTP+QNNL E
Sbjct: 801 EYIIKERPLLSRIKWIHMIIDEGHRMKNVKSKLSQTLNEYYSSRYRLILTGTPLQNNLPE 860
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSAFMLR 271
LWAL++F +P +F ++ F F +A +++ ++ ++ E+ L +L F+LR
Sbjct: 861 LWALLNFVLPKIFNSVKSFDEWF-NAPFANTGGEKMEMNEEEALLVVKRLHKVLRPFLLR 919
Query: 272 RTKQKLVECGHLMLPP------LTEITVLQKKVYASILR-KELPKLLALSSRTANHQSLQ 324
R K K VE LP T+++ LQ K+Y S+ + K LP ++++ + Q+LQ
Sbjct: 920 RLK-KDVES---ELPDKVEKVIYTKMSALQWKLYESVQKYKTLPTDMSVA-KPQKRQNLQ 974
Query: 325 NT---------------------------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
N +GK +LD +L KL+ +GH+VL+F
Sbjct: 975 NALMQLRKICNHPYVFREVDEDFTVGNTTDEQIIRVAGKFELLDRILPKLFKTGHKVLIF 1034
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
QMT+ + I+ DF + R + Y RLDGS +AE+R + F+ ++ + V
Sbjct: 1035 FQMTEIMTIVSDFFDFRGWKYCRLDGSTKAEDRQTLLSTFNDPNSPYQ-----------V 1083
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+GLNL +ADTVI Y+ DWNP D QA RAHRIGQ V + L++ TVE
Sbjct: 1084 FILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQDRAHRIGQKKEVRVLRLISSGTVE 1143
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEESDD 531
E+++ RA+RKL + V+ D EV T E + L F + +NEE+++
Sbjct: 1144 ELVLARAQRKLEIDGKVIQAGKFD-EVT--TGAEYEALLQKAFETSAEE----DNEETNE 1196
Query: 532 LRLSGLNSMVEK-------VIAMRHEQVSGK------AGRKFEVNPVALLEESDL 573
L LN ++ + AM +E+ K +G K E+ P L++ES+L
Sbjct: 1197 LDDDELNELLARGDNELGIFTAMDNERKERKIAEWRASGSKGEL-PPPLMQESEL 1250
>gi|242767903|ref|XP_002341462.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC
10500]
gi|218724658|gb|EED24075.1| chromodomain helicase (Chd1), putative [Talaromyces stipitatus ATCC
10500]
Length = 1499
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 195/509 (38%), Positives = 272/509 (53%), Gaps = 75/509 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +LK QV+GL++L + NV+L DEMGLGKT+Q I+F+++L+ ++ GPF+
Sbjct: 438 FLQNGQLKDFQVKGLNFLAYNWSRNQNVVLADEMGLGKTVQTIAFMNWLRHIRIQDGPFI 497
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W +TP + + Y G R+ I+ YE +K+ N F+
Sbjct: 498 VVVPLSTIPSWSETFDYWTPDVNYVVYTGSSAARQIIKD--YELMKD----GNPRKPKFN 551
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLTT++ MD FL Q PW + +DEA RLKN S LY L + F P RLL+TGTPI
Sbjct: 552 VLLTTFEYANMDFDFLRQFPWQFMAVDEAHRLKNRESNLYANLLD-FRSPARLLITGTPI 610
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL+EL ALM F P + + D SS A E+ L+ L ML
Sbjct: 611 QNNLAELSALMDFLNPGL-------VEVEVDMDLSSEA-----ASEKLAKLQNTLKPLML 658
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKEL----------------- 307
RRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 659 RRTKSK-VETD---LPPKTEKIIRVELSDVQLEYYKNILTKNYAALNEGANGQKQSLLNI 714
Query: 308 ------------------PKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
KLL ++R + + T+SGK+++LD LL KL GHRVL
Sbjct: 715 MMELKKASNHPFMFPNAEAKLLEGNTRREDLLRIMITSSGKMMLLDQLLAKLKRDGHRVL 774
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D++ R Y Y+RLDG+I A R A+ HF+ + +
Sbjct: 775 IFSQMVKMLDILGDYMRFRGYQYQRLDGTISATNRRVAMEHFNAPDSSD----------- 823
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ T
Sbjct: 824 FAFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDT 883
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREV 498
+EE ++ RA KL L + + +++V
Sbjct: 884 IEEEVLERARNKLMLEFITIQRGLTEKDV 912
>gi|50312307|ref|XP_456186.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645322|emb|CAG98894.1| KLLA0F24838p [Kluyveromyces lactis]
Length = 1062
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 190/499 (38%), Positives = 278/499 (55%), Gaps = 77/499 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +L+ +QV GL+WLI + ++ +L DEMGLGKTLQ+ISFL YL++ + GP++
Sbjct: 130 FIKEGKLRDYQVYGLNWLISLHESKLSGILADEMGLGKTLQSISFLGYLRYIKGIEGPYI 189
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ P S D W E AK+TP+++ + G+++ R+ + T + FD
Sbjct: 190 VIVPKSTLDNWQREFAKWTPEVKTVILQGDKDFRKELIET------------KILTCNFD 237
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VL+T+Y++VL ++ L + W Y +IDEA R+KN S L V+R F RLL+TGTP+
Sbjct: 238 VLITSYEMVLKEKLTLKRFAWEYILIDEAHRIKNEQSALSQVIR-LFYSKNRLLITGTPL 296
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ---FTSLKGILSA 267
QNNL ELWAL++F +P VFG F F+ + GK ++Q L +L
Sbjct: 297 QNNLHELWALLNFLLPDVFGDSEVFDEWFQ---------QNGKEEDQEVVVQQLHSVLQP 347
Query: 268 FMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKEL-------------P 308
F+LRR K ++ + L P EI T +Q + Y S+L K++
Sbjct: 348 FLLRRVKSEVEKS----LLPKKEINLYVGMTDMQIEWYKSLLEKDIDAVNGAVGKREGKT 403
Query: 309 KLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LL + + NH L A SGK++VLD LLKK G RVL+
Sbjct: 404 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIVLDKLLKKKKEQGSRVLI 463
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R Y Y R+DGS +ER AI ++ ++ + F
Sbjct: 464 FSQMSRLLDILEDYCYFRGYEYCRIDGSTSHDERVEAIDEYNKPNS-----------EKF 512
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+F+++TRAGG+G+NLV ADTV+ Y+ DWNPQ D QA+ RAHRIGQ V VTE+ +
Sbjct: 513 IFLLTTRAGGLGINLVTADTVVLYDSDWNPQADLQAMDRAHRIGQKKQVFVYRFVTENAI 572
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 573 EEKVIERAAQKLRLDQLVI 591
>gi|378732337|gb|EHY58796.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
Length = 1120
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/492 (37%), Positives = 269/492 (54%), Gaps = 73/492 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ +Q+ GL+WLI + G++ +L DEMGLGKTLQ ISFL YL+ GP L++ P
Sbjct: 195 GEMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHICGIKGPHLIIVP 254
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S D W E K+TP ++VL G +++R + V E+ FDV +T
Sbjct: 255 KSTLDNWAREFKKWTPDVDVLVLQGAKDERHALINDRL--VDEK----------FDVCIT 302
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y+++L ++ L + W Y I+DEA R+KN S L ++R F RLL+TGTP+QNNL
Sbjct: 303 SYEMILREKAHLKKFAWEYIIVDEAHRIKNEESSLAQIIR-VFSSRNRLLITGTPLQNNL 361
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VFG F S F S+ + + +Q L +L F+LRR K
Sbjct: 362 HELWALLNFLLPDVFGDSEAFDSWF-----SNQNEDQDTVVQQ---LHRVLRPFLLRRVK 413
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLALS- 314
+ + L P E+ + +Q + Y IL K++ +LL +
Sbjct: 414 SDVEKS----LLPKKELNLYVGMSEMQVRWYKKILEKDIDAVNGAGGKRESKTRLLNIVM 469
Query: 315 --SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L A SGK+++LD +LK++ G RVL+F+QM++
Sbjct: 470 QLRKCCNHPYLFEGAEPGPPYTTDEHLVYNSGKMIILDKILKRMKEEGSRVLIFSQMSRV 529
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D+ R + Y R+DG E+R AAI ++ G++ FVF+++TR
Sbjct: 530 LDILEDYCVFRGHQYCRIDGGTAHEDRIAAIDEYN-----------KPGSEKFVFLLTTR 578
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI Y+ DWNPQ D QA+ RAHRIGQ V VTE+ +EE ++ R
Sbjct: 579 AGGLGINLTTADIVILYDSDWNPQADLQAMDRAHRIGQTKQVKVFRFVTENAIEEKVLER 638
Query: 478 AERKLRLSHNVV 489
A +KLRL V+
Sbjct: 639 AAQKLRLDQLVI 650
>gi|357129858|ref|XP_003566577.1| PREDICTED: chromatin structure-remodeling complex subunit
snf21-like [Brachypodium distachyon]
Length = 1122
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 269/487 (55%), Gaps = 58/487 (11%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V EL+P+Q+EGL W++ + +N +L DEMGLGKT+Q I+ ++YL + PGP L++
Sbjct: 429 VGGELRPYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEKKEVPGPHLIV 488
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P +V W +E ++ P + + Y G ++R+++R T + F+VL
Sbjct: 489 APKAVLPNWSNEFKQWAPSIGTILYDGRPDERKSLRETNFGG-------------QFNVL 535
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LT YD++L D+ FL ++ W Y I+DE RLKN L L +L+ RRLL+TGTPIQN
Sbjct: 536 LTHYDLILKDKKFLKKVHWNYLIVDEGHRLKNHECALARTLVSGYLIRRRLLLTGTPIQN 595
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
+L ELW+L++F +P++F + F F + + L +L F+LRR
Sbjct: 596 SLQELWSLLNFILPNIFNSSGNFEEWFNAPFACDVSLNDEEQLLIIHRLHQVLRPFLLRR 655
Query: 273 TKQKLVECGHLMLPPLTEI------TVLQKKVYASIL------------RKELPKLLALS 314
K ++ + LP T++ + QK Y + K L L
Sbjct: 656 KKDEVEK----YLPSKTQVILKCDFSAWQKAYYEQVTSKGRVALGSGLKSKALQNLSMQL 711
Query: 315 SRTANHQSL--QN----------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
+ NH L +N ASGK +LD LL KL +GHRVLLF+QMT+ L++L+
Sbjct: 712 RKCCNHPYLFVENYNMYQREEIVRASGKFELLDRLLPKLRKAGHRVLLFSQMTKLLNVLE 771
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
+L++ + Y RLDGS + EER + F+ + + + F+F++STRAGG+G
Sbjct: 772 VYLQMHSFKYMRLDGSTKTEERGKLLADFNKKDS-----------EYFIFLLSTRAGGLG 820
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
LNL ADTVI ++ DWNPQ+D+QA RAHRIGQ N V LV+ ++EE I+ RA++K+
Sbjct: 821 LNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKNEVRVFVLVSVGSIEEEILDRAKQKM 880
Query: 483 RLSHNVV 489
+ V+
Sbjct: 881 GIDAKVI 887
>gi|68468949|ref|XP_721533.1| hypothetical protein CaO19.3035 [Candida albicans SC5314]
gi|68469498|ref|XP_721262.1| hypothetical protein CaO19.10553 [Candida albicans SC5314]
gi|46443171|gb|EAL02455.1| hypothetical protein CaO19.10553 [Candida albicans SC5314]
gi|46443453|gb|EAL02735.1| hypothetical protein CaO19.3035 [Candida albicans SC5314]
Length = 1410
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 197/560 (35%), Positives = 303/560 (54%), Gaps = 84/560 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q ++FLS+L +++ GP L
Sbjct: 356 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHL 415
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP-F 149
V+ PLS W K+ P + + Y+G E R+ IR + ++ N + P F
Sbjct: 416 VVVPLSTVPAWQETFEKWAPDVNCVYYLGNGEARKTIR---------EYELYNQNRKPKF 466
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ +L D+ L W + +DEA RLKN S LY L+ F + RLL+TGTP
Sbjct: 467 NVLLTTYEYILKDKNELGAFKWQFLAVDEAHRLKNAESSLYEALK-GFKVSNRLLITGTP 525
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF-TSLKGILSAF 268
+QNN+ EL AL +F MP F T++Q + + + S +EQ+ L+ +S F
Sbjct: 526 LQNNVKELAALCNFLMPGKF-TIDQEIDF--ETIDSE--------QEQYIKDLQKKISPF 574
Query: 269 MLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALS-------- 314
+LRR K+ + + LP +E ++ +Q + Y +I+ K L A +
Sbjct: 575 ILRRLKKDVEKS----LPSKSERILRVELSDIQTEYYKNIITKNYAALNAGNRGSQISLL 630
Query: 315 ------SRTANHQSL-----------------QNT------ASGKLVVLDLLLKKLYNSG 345
+ +NH L +NT +SGK+V+L+ LL +L G
Sbjct: 631 NIMSELKKASNHPYLFDGAEDKVLDKAGSPSRENTLKGIVMSSGKMVLLEQLLSRLRKEG 690
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
HRVL+F+QM + LDIL D++ ++ Y ++RLDG++ + +R AI HF+ A
Sbjct: 691 HRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKRKIAIDHFN-----------AP 739
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
G+ F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV V
Sbjct: 740 GSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFV 799
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVE--TDDLRSII-FGLHLFDPK 522
++ TVEE I+ RA +K+ L + ++ + D K + E T++L I+ FG +
Sbjct: 800 SKDTVEEQILERARKKMVLEYAIISLGITDPSAKNGSKTEPSTNELSQILKFGAGTMFKE 859
Query: 523 AINNEESDDLRLSGLNSMVE 542
N ++ ++L L + S E
Sbjct: 860 NNNQQKLENLNLDDVLSHAE 879
>gi|156551567|ref|XP_001601734.1| PREDICTED: chromatin-remodeling complex ATPase chain Iswi [Nasonia
vitripennis]
Length = 879
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 191/512 (37%), Positives = 278/512 (54%), Gaps = 74/512 (14%)
Query: 38 KPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSV 97
K +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L Y+K + GP +V+ P +
Sbjct: 3 KDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHFRNINGPHIVVVPKTT 62
Query: 98 TDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYD 157
W++E K+ P L + +G+ + R R + + P +DV +T+Y+
Sbjct: 63 LANWMNEFKKWCPSLRTVFLIGDSDTRNAFIRDV------------MLPGEWDVCVTSYE 110
Query: 158 VVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSEL 217
+VL ++ + W Y ++DEA RLKN S L +LRE RLL+TGTP+QNNL EL
Sbjct: 111 MVLREKWVFKKFNWRYMVVDEAHRLKNEKSKLSEILRE-CKTANRLLLTGTPLQNNLHEL 169
Query: 218 WALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKL 277
W+L++F +P VF + F S F +++S + E+ L +L F+LRR K ++
Sbjct: 170 WSLLNFLLPDVFNSSEDFDSWF----NTNSFLGDNTLIER---LHAVLRPFLLRRLKSEV 222
Query: 278 VECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALSSRT 317
+ L P EI V +Q++ Y +L K+ L +L +
Sbjct: 223 EKA----LKPKKEIKVYIGLSKMQREWYTKVLMKDIDIVNGAGKIEKMRLQNILMQLRKC 278
Query: 318 ANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQ 362
NH L + A GKLV+LD LL KL RVL+F+QMT+ LDIL+
Sbjct: 279 CNHPYLFDGAEPGPPYTTDEHLVYNCGKLVILDKLLPKLQQQQSRVLIFSQMTRMLDILE 338
Query: 363 DFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVG 422
D+ R Y Y RLDG+ E+R I ++ A G++ F+FM+STRAGG+G
Sbjct: 339 DYCHWRCYQYCRLDGNTAHEDRQRQINEYN-----------APGSEKFIFMLSTRAGGLG 387
Query: 423 LNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V +TE+TVEE I+ RAE KL
Sbjct: 388 INLATADVVIIYDSDWNPQMDLQAMDRAHRIGQQKQVRVFRFITENTVEEKIVERAEVKL 447
Query: 483 RLSHNVVGDD-VVDREVKERTAVETDDLRSII 513
RL V+ ++D ++ A+ D++ +II
Sbjct: 448 RLDKLVIQQGRLID---AKQNALNKDEMLNII 476
>gi|190347873|gb|EDK40225.2| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC
6260]
Length = 1367
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 191/530 (36%), Positives = 289/530 (54%), Gaps = 80/530 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q I+FLS+L +++ GP L
Sbjct: 325 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTIAFLSWLIYARRQNGPHL 384
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W K+ P + + Y+G E R IR YE + + + F+
Sbjct: 385 VVVPLSTIPAWQETFEKWAPDVNCIYYLGNTESRATIRD--YE-------LYDGKKIKFN 435
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
V+LTTY+ +L D+ L I W + +DEA RLKN S LY LR F + RLL+TGTP+
Sbjct: 436 VMLTTYEYILKDRNELGSIKWQFLAVDEAHRLKNAESSLYESLRS-FRVANRLLITGTPL 494
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNN+ EL AL +F +P F ++Q + + A + IKE L+ + ++L
Sbjct: 495 QNNIKELAALCNFLLPGRF-NIDQEID-----FETPDAEQEKYIKE----LQQNIKPYIL 544
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRK------------------- 305
RR K+ + + LP T E++ +Q Y +I+ K
Sbjct: 545 RRLKKDVEKS----LPSKTERILRVELSDMQTDYYKNIITKNYSALNAGNSGSQISLLNV 600
Query: 306 --ELPK--------------LLALSSRTANHQSLQN---TASGKLVVLDLLLKKLYNSGH 346
EL K +L S+ +AN +S+ +SGK+V+L+ LL +L GH
Sbjct: 601 MAELKKASNHPYLFDGAEERVLGTSTSSANRESVLRGMIMSSGKMVLLEQLLTRLRKEGH 660
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDIL D+L ++ Y+++RLDG I + +R +I HF+ A
Sbjct: 661 RVLIFSQMVRMLDILGDYLSIKGYAFQRLDGGIPSSQRRISIDHFN-----------APD 709
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+ FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV V+
Sbjct: 710 SRDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVS 769
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FG 515
+ T+EE I+ RA +K+ L + ++ + D K ++ +++L I+ FG
Sbjct: 770 KDTIEEEILERARKKMILEYAIISLGITDPSKKSKSEPNSNELSQILKFG 819
>gi|357132133|ref|XP_003567687.1| PREDICTED: probable chromatin-remodeling complex ATPase chain-like
[Brachypodium distachyon]
Length = 1099
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 210/603 (34%), Positives = 320/603 (53%), Gaps = 85/603 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS + YL + GP +V+
Sbjct: 219 INGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEFKGITGPHMVV 278
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+ E+A+F P L ++++G E+R +IR + + P FDV
Sbjct: 279 APKSTLGNWMKEIARFCPILRAVKFLGNPEERNHIREKL------------LQPGKFDVC 326
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 327 VTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNYRLLITGTPLQN 385
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 386 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 438
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 439 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQL 494
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A +GK+V+LD LL KL + RVL+F+QMT+ LD
Sbjct: 495 RKCCNHPYLFQGAEPGPPYTTGDHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 554
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 555 ILEDYLMYRGYQYCRIDGNTGGEDRDASIDAFN-----------KPGSEKFVFLLSTRAG 603
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD V+ Y+ DWNPQ D QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 604 GLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 663
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLH-LFDPK--AINNEESDDLRLS 535
+KL L V+ + E+ +V DDL ++ FG +F K I +E+ D +
Sbjct: 664 KKLALDALVIQQG----RLAEQKSVNKDDLLQMVRFGAEKVFSSKDSTITDEDIDRIIAK 719
Query: 536 GLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRS 595
G E M+ + KF+++ A L + D E + PD + +
Sbjct: 720 GEEITAELDAKMKK---FTEDAIKFKMDDTAELYDFDDDKEE------NKPDFKKIVGDN 770
Query: 596 WVE 598
W+E
Sbjct: 771 WIE 773
>gi|347829336|emb|CCD45033.1| similar to chromatin remodelling complex ATPase chain ISW1
[Botryotinia fuckeliana]
Length = 1130
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/497 (36%), Positives = 273/497 (54%), Gaps = 79/497 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +QV GL+WL+ + G++ +L DEMGLGKTLQ ISFL YL+ GP L++
Sbjct: 182 IQGQMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYLRHIMDITGPHLIV 241
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E ++TP++ VL G +E+R N+ + E + ++ FDV
Sbjct: 242 VPKSTLDNWKREFIRWTPEVNVLVLQGAKEERNNL---INERLIDEK---------FDVC 289
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+++L ++ L + W Y IIDEA R+KN S L V+R F RLL+TGTP+QN
Sbjct: 290 ITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIR-LFNSRNRLLITGTPLQN 348
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT---SLKGILSAFM 269
NL ELWAL++F +P VFG F F G+ ++Q T L +L F+
Sbjct: 349 NLHELWALLNFLLPDVFGDAEAFDQWFS-----------GQQEDQDTVVQQLHRVLRPFL 397
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKL 310
LRR K + + L P E+ + +Q K Y IL K++ +L
Sbjct: 398 LRRVKADVEKS----LLPKKEVNLYIGMSDMQVKWYKKILEKDIDAVNGAGGKRESKTRL 453
Query: 311 LALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
L + + NH L A +GK+V+LD LL ++ +G RVL+F+
Sbjct: 454 LNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNAGKMVMLDKLLTRMKKAGSRVLIFS 513
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM++ LDIL+D+ R+Y Y R+DG E+R AI ++ + + FVF
Sbjct: 514 QMSRLLDILEDYCVFREYKYCRIDGGTAHEDRIQAIDDYNKPDS-----------EKFVF 562
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
+++TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VTE+ +EE
Sbjct: 563 LLTTRAGGLGINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTENAIEE 622
Query: 473 VIMRRAERKLRLSHNVV 489
++ RA +KLRL V+
Sbjct: 623 KVLERAAQKLRLDQLVI 639
>gi|189190262|ref|XP_001931470.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973076|gb|EDU40575.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1273
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 290/562 (51%), Gaps = 84/562 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL + PGP+LV+
Sbjct: 435 VGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKRQPGPYLVI 494
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W +E K+ P + + Y G R+ Y+ Q F VL
Sbjct: 495 VPLSTLTNWTNEFEKWAPSVTKIVYKGPPNSRKQ-----YQQQIRWGQ--------FQVL 541
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS+I W + I+DE R+KN S L + +++ RL++TGTP+QN
Sbjct: 542 LTTYEFIIKDRPVLSKIKWVHMIVDEGHRMKNAGSKLSMTITQYYTTRYRLILTGTPLQN 601
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL+ELWA+++F +P++F + F F ++ + ++ E+ L +L
Sbjct: 602 NLTELWAMLNFVLPTIFKSATSFDEWFNTPFANTGGQDKMELTEEEQLLVIRRLHKVLRP 661
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR----------------K 305
F+LRR K+ + + LP TE + LQ K+Y ++ +
Sbjct: 662 FLLRRLKRDVEKD----LPDKTERVIKCNFSTLQAKLYKQLVTHNRLMVSDGKGGKTGMR 717
Query: 306 ELPKLLALSSRTANH-------QSLQNT----------ASGKLVVLDLLLKKLYNSGHRV 348
L +L + NH + + N A+GK +LD +L K +GHRV
Sbjct: 718 GLSNMLMQLRKLCNHPFVFEEVEDVMNPTKGTNDLLWRAAGKFELLDRILPKFQATGHRV 777
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F QMTQ ++I++D+L LR Y RLDG+ +A++R +R F+ A +
Sbjct: 778 LMFFQMTQIMNIMEDYLRLRGMMYLRLDGATKADDRSDLLRLFN-----------APDSP 826
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V + L+T +
Sbjct: 827 YFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSN 886
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEE 528
+VEE I+ RA KL + V+ D + K DD R + + L +A + E
Sbjct: 887 SVEEKILERANYKLDMDGKVIQAGKFDNKSK-------DDERDAMLRIMLESAEAAESLE 939
Query: 529 SDDLRLSGLNSMVEKVIAMRHE 550
+++ LN I MRH+
Sbjct: 940 QEEMDDDDLNQ-----IMMRHD 956
>gi|50547625|ref|XP_501282.1| YALI0C00363p [Yarrowia lipolytica]
gi|49647149|emb|CAG81577.1| YALI0C00363p [Yarrowia lipolytica CLIB122]
Length = 1320
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/543 (36%), Positives = 294/543 (54%), Gaps = 83/543 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++FLS+L +++ GP LV+ P
Sbjct: 296 GELRDFQLTGINWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLVYARKQHGPHLVVVP 355
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W + P + L Y+G E R+ +R + ++ N P F+VLLT
Sbjct: 356 LSTVPAWQETFEFWAPGINYLAYLGNTESRKALRDHEF-----YNKTGNKKP-KFNVLLT 409
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L I W Y +DEA RLKN S LY L+E F + RLL+TGTP+QNN+
Sbjct: 410 TYEYILKDRAELGSIKWQYLAVDEAHRLKNAESALYESLKE-FRVANRLLITGTPLQNNI 468
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL+ F MP G L L + + G I+E L L F+LRR K
Sbjct: 469 KELAALVDFLMP---GKLTIDLEI---NFENPDEEQEGYIRE----LHKRLQPFILRRLK 518
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS------------- 315
+ + + LP T E++ +Q+ Y +I+ K L A ++
Sbjct: 519 KDVEKS----LPSKTERILRVEMSDMQQDYYKNIISKNYTALNAGATGGHQMSLLNIMTE 574
Query: 316 --RTANHQSLQNTA------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L TA SGK+V+LD LL +L GHRVL
Sbjct: 575 LKKASNHPYLFPTAESKFLSLAENGASRENVFRGMIMTSGKMVLLDKLLTQLKKDGHRVL 634
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L+++ Y ++RLDG++ + R AI H Y+ ND
Sbjct: 635 IFSQMVRMLDILGDYLQIKGYQFQRLDGTVPSATRRIAIDH----------YNAPDSND- 683
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ V++ T
Sbjct: 684 FVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDT 743
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDR--EVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
VEE ++ RA +K+ L + ++ + D+ ++T T +L I+ FG ++F KA +
Sbjct: 744 VEEQVLERARKKMILEYAIISLGITDKGSSNNKKTEPSTSELSEILKFGAGNMF--KAND 801
Query: 526 NEE 528
N++
Sbjct: 802 NQD 804
>gi|440294401|gb|ELP87418.1| chromodomain helicase hrp1, putative [Entamoeba invadens IP1]
Length = 1234
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/538 (34%), Positives = 290/538 (53%), Gaps = 70/538 (13%)
Query: 19 ERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSY 78
ER +++ + L+ +Q+EG +W++ + G +L DEMGLGKT+Q ++FL +
Sbjct: 272 ERVWNKKIESPVYKNNNTLRSYQLEGHNWMVYNWCKGRGCILADEMGLGKTVQVVTFLEH 331
Query: 79 LKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ 138
L Q GPFL++ PL + + W E++++T L V+ Y G +E R+ +++ + + E+
Sbjct: 332 LHSYQKLHGPFLIVMPLGMVEHWHREISEWTD-LNVILYSGSKENRKLVKKYEWFYTDEE 390
Query: 139 SQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFL 198
N + F+V++TTY+ ++ D L QI W +IDEAQRLKN S L L
Sbjct: 391 GN-KNTNQTKFNVMVTTYETLIADFEDLQQISWFVVVIDEAQRLKNKDSKLLKTL-SSLK 448
Query: 199 MPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF 258
++L+TGTPIQNNL ELW L+++ P FG+L +F + + ++ EQ
Sbjct: 449 TDHKILLTGTPIQNNLGELWTLLNYIEPKKFGSLEEFDKMYGNIDNNP---------EQV 499
Query: 259 TSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRK------- 305
T L+ + F+LRR K + + +PP E+T++QK+ Y ++ K
Sbjct: 500 TELQKSIKPFLLRRVKSDVEKS----IPPKEETVIEVELTMVQKQYYRALYEKNREFLNK 555
Query: 306 --------ELPKLLALSSRTANHQSL------QNTA----------------SGKLVVLD 335
L L+ + NH L ++TA SGKLV+LD
Sbjct: 556 GCVGSNMPNLQNLMMQLRKVCNHPYLISGVEEKDTAQFAENSEEYFKQLIKSSGKLVLLD 615
Query: 336 LLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQS 395
LL KLY H+VL+F+Q+ + L+I++ +L+ + Y YERLDGSIRA +R Q+
Sbjct: 616 KLLPKLYEDKHKVLIFSQLKKVLNIIEKYLKYKGYLYERLDGSIRALDR---------QN 666
Query: 396 AIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQ 455
AI+R + + FVF++ TRAGG G+NL ADTVI Y+ DWNPQ D QA R HRIGQ
Sbjct: 667 AIDRFMNPEM--NKFVFLLCTRAGGFGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQ 724
Query: 456 MNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
V LV+++T E + RA +KL L V+ + + KE+T + ++ S++
Sbjct: 725 KKEVKVYRLVSKNTYERYMFERASKKLGLDQAVLANVTSSNDSKEKTQLSKAEIESLL 782
>gi|19114572|ref|NP_593660.1| ATP-dependent DNA helicase Hrp1 [Schizosaccharomyces pombe 972h-]
gi|15214054|sp|Q9US25.1|HRP1_SCHPO RecName: Full=Chromodomain helicase hrp1; AltName:
Full=ATP-dependent helicase hrp1
gi|6714825|emb|CAB66168.1| ATP-dependent DNA helicase Hrp1 [Schizosaccharomyces pombe]
Length = 1373
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 273/505 (54%), Gaps = 75/505 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ Q+ G++W+ + N +L DEMGLGKT+Q + FLSYL S GPFL++ P
Sbjct: 388 GEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVP 447
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +A +TP L + Y G E R NIR YE +N L F++LLT
Sbjct: 448 LSTVPAWQETLANWTPDLNSICYTGNTESRANIRE--YEFYLS----TNSRKLKFNILLT 501
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L+ I W Y IDEA RLKN S LY L + F RLL+TGTP+QNNL
Sbjct: 502 TYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQ-FRTANRLLITGTPLQNNL 560
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +L++F MP F ++ +A + I++ L+ L F+LRR K
Sbjct: 561 KELASLVNFLMPGKFYIRDEL------NFDQPNAEQERDIRD----LQERLQPFILRRLK 610
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS------------- 315
+ + + LP + E++ +Q + Y +IL K L +
Sbjct: 611 KDVEKS----LPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVE 666
Query: 316 --RTANHQSLQNTA----------------------SGKLVVLDLLLKKLYNSGHRVLLF 351
+ +NH L A SGK+V+LD LL++L + GHRVL+F
Sbjct: 667 LKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVLIF 726
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QM + L+IL +++ LR Y+Y+RLDG+I A R +I HF+ + + FV
Sbjct: 727 SQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPD-----------FV 775
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV +++ TVE
Sbjct: 776 FLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVE 835
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDR 496
E I+ RA RK+ L + ++ V ++
Sbjct: 836 EDILERARRKMILEYAIISLGVTEK 860
>gi|156043545|ref|XP_001588329.1| hypothetical protein SS1G_10776 [Sclerotinia sclerotiorum 1980]
gi|154695163|gb|EDN94901.1| hypothetical protein SS1G_10776 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1086
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/497 (36%), Positives = 274/497 (55%), Gaps = 79/497 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +QV GL+WL+ + G++ +L DEMGLGKTLQ ISFL YL+ GP L++
Sbjct: 186 IQGQMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYLRHIMDITGPHLIV 245
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E A++TP++ VL G +++R + + E + ++ FDV
Sbjct: 246 VPKSTLDNWKREFARWTPEVNVLVLQGAKDERNTL---INERLIDEK---------FDVC 293
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+++L ++ L + W Y IIDEA R+KN S L V+R F RLL+TGTP+QN
Sbjct: 294 ITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIR-LFNSRNRLLITGTPLQN 352
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT---SLKGILSAFM 269
NL ELWAL++F +P VFG F F G+ ++Q T L +L F+
Sbjct: 353 NLHELWALLNFLLPDVFGDAEAFDQWFS-----------GQQEDQDTVVQQLHRVLRPFL 401
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKL 310
LRR K + + L P EI + +Q K Y IL K++ +L
Sbjct: 402 LRRVKADVEKS----LLPKKEINLYIGMSDMQVKWYKKILEKDIDAVNGAGGKRESKTRL 457
Query: 311 LALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
L + + NH L A +GK+V+LD LL ++ +G RVL+F+
Sbjct: 458 LNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNAGKMVMLDKLLTRMKKAGSRVLIFS 517
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM++ LDIL+D+ R++ Y R+DG E+R AI ++ G++ FVF
Sbjct: 518 QMSRLLDILEDYCVFREFKYCRIDGGTAHEDRIQAIDDYN-----------KPGSEKFVF 566
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
+++TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VTE+ +EE
Sbjct: 567 LLTTRAGGLGINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTENAIEE 626
Query: 473 VIMRRAERKLRLSHNVV 489
++ RA +KLRL V+
Sbjct: 627 KVLERAAQKLRLDQLVI 643
>gi|218188229|gb|EEC70656.1| hypothetical protein OsI_01941 [Oryza sativa Indica Group]
Length = 1259
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 295/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 227 IKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 286
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+ E+ +F P L ++++G E+R +IR + + P FDV
Sbjct: 287 APKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENL------------LQPGKFDVC 334
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 335 VTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMR-IYNTNYRLLITGTPLQN 393
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 394 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 446
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 447 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKRLLNIAMQL 502
Query: 317 --TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L A +GK+V+LD LL KL + RVL+F+QMT+ LD
Sbjct: 503 RKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 562
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 563 ILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFN-----------KPGSEKFVFLLSTRAG 611
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD V+ Y+ DWNPQ D QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 612 GLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 671
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V DDL ++ FG + F K I +E+ D +
Sbjct: 672 KKLALDALVIQQG----RLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 727
Query: 536 GLNSMVE 542
G + E
Sbjct: 728 GEETTAE 734
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 19/189 (10%)
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STR
Sbjct: 822 LDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFN-----------KPGSEKFVFLLSTR 870
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD V+ Y+ DWNPQ D QA RAHRIGQ V TE+T+EE ++ R
Sbjct: 871 AGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 930
Query: 478 AERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLR 533
A +KL L V+ + E+ V DDL ++ FG + F K I +E+ D +
Sbjct: 931 AYKKLALDALVIQQG----RLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDIDRII 986
Query: 534 LSGLNSMVE 542
G + E
Sbjct: 987 AKGEETTAE 995
>gi|242057381|ref|XP_002457836.1| hypothetical protein SORBIDRAFT_03g014780 [Sorghum bicolor]
gi|241929811|gb|EES02956.1| hypothetical protein SORBIDRAFT_03g014780 [Sorghum bicolor]
Length = 1070
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 294/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 190 IKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 249
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+ E+ +F P L ++++G E+R +IR + + P FDV
Sbjct: 250 APKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRDNL------------LQPGKFDVC 297
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 298 VTSFEMAIKEKSTLRRFSWRYIIIDEAHRIKNENSLLSKTMR-IYNTNYRLLITGTPLQN 356
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 357 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 409
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 410 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKRLLNIAMQL 465
Query: 317 --TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L A +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 466 RKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 525
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 526 ILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFN-----------RPGSEKFVFLLSTRAG 574
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD V+ Y+ DWNPQ D QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 575 GLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 634
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V DDL ++ FG + F K I +E+ D +
Sbjct: 635 KKLALDALVIQQG----RLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 690
Query: 536 GLNSMVE 542
G + E
Sbjct: 691 GEETTAE 697
>gi|328865462|gb|EGG13848.1| myb domain-containing protein [Dictyostelium fasciculatum]
Length = 1157
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 191/518 (36%), Positives = 274/518 (52%), Gaps = 78/518 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +Q+ GL+WLI+ Y G+N +L DEMGLGKTLQ IS L YL + GP L++ P S
Sbjct: 218 MRDYQIYGLNWLIQLYERGINGILADEMGLGKTLQTISLLGYLSEYKGIRGPHLIIAPKS 277
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
GW E + P L V+++ G +++R I+ + K FDV +TTY
Sbjct: 278 TLSGWCKEFRNWCPFLRVVKFHGNKDERAEIKENQLVYKK------------FDVCITTY 325
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y IIDEA R+KN +SVL +R F RLL+TGTP+QNNL E
Sbjct: 326 EMVIKEKAVFKKFSWRYIIIDEAHRIKNENSVLSKGVR-LFNSQFRLLITGTPLQNNLHE 384
Query: 217 LWALMHFCMPSVFGTLNQFLSTFK-DAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
LWAL++F +P VF + F F D V + +E L +L F+LRR K
Sbjct: 385 LWALLNFLLPDVFTSSEDFDKWFNLDQVDNQ--------QEVIDKLHKVLRPFLLRRIKS 436
Query: 276 KLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALS--------------- 314
++ + LPP EI + +Q++ Y S+L K+ L +
Sbjct: 437 EVEKS----LPPKKEIKLFVGMSTMQREWYKSLLTKDFEALHGIGVKGGSGKVKLLNICM 492
Query: 315 --SRTANHQSLQNTA--------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+V+LD LL +L G RVL+F+QM + L
Sbjct: 493 QLRKACNHPYLFDGAEEQPYTTGEHIIDNSGKMVMLDRLLARLKQRGSRVLIFSQMARML 552
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D++ R Y Y R+DG +E R I F+ A G++ F F+++TRA
Sbjct: 553 DILEDYMMYRDYKYCRIDGGTDSESRENNIETFN-----------APGSELFAFLLTTRA 601
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+ L AD V+ ++ DWNPQVD QA RAHRIGQ V VTE ++EE ++ +A
Sbjct: 602 GGLGITLNTADIVVLFDSDWNPQVDLQAQDRAHRIGQTKPVTVYRFVTESSMEEKMVEKA 661
Query: 479 ERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FG 515
E KL L V+ R V+ A D+L S+I FG
Sbjct: 662 EMKLHLDAAVIQQ---GRLVEANKAANPDELLSMIRFG 696
>gi|115462129|ref|NP_001054664.1| Os05g0150300 [Oryza sativa Japonica Group]
gi|54291826|gb|AAV32194.1| putative ATPase [Oryza sativa Japonica Group]
gi|113578215|dbj|BAF16578.1| Os05g0150300 [Oryza sativa Japonica Group]
gi|222630218|gb|EEE62350.1| hypothetical protein OsJ_17139 [Oryza sativa Japonica Group]
Length = 1158
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 200/541 (36%), Positives = 299/541 (55%), Gaps = 76/541 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 281 IKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 340
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+ E+ +F P L ++++G E+R +IR + + P FDV
Sbjct: 341 APKSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENL------------LVPGKFDVC 388
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 389 VTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMR-IYNTNYRLLITGTPLQN 447
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + TF D S + ++ +Q L +L F+LRR
Sbjct: 448 NLHELWSLLNFLLPEIFSSA----ETFDDWFQISGENDQHEVVQQ---LHKVLRPFLLRR 500
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 501 LKSD-VEKG---LPPKKETILKVGMSEMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQL 556
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 557 RKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 616
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L + Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 617 ILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFN-----------KPGSEKFVFLLSTRAG 665
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 666 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 725
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ AV D+L ++ FG + F K I +E+ D +
Sbjct: 726 KKLALDALVIQQG----RLAEQKAVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 781
Query: 536 G 536
G
Sbjct: 782 G 782
>gi|334185118|ref|NP_187252.2| Homeotic gene regulator [Arabidopsis thaliana]
gi|332640808|gb|AEE74329.1| Homeotic gene regulator [Arabidopsis thaliana]
Length = 1102
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 178/496 (35%), Positives = 275/496 (55%), Gaps = 75/496 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ +Q+EGL W++ + +N +L DEMGLGKT+Q IS ++YL ++ PGP+L++ P
Sbjct: 401 GELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAP 460
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
+V WV+E A + P + Y G E+R+ IR + K F+VL+T
Sbjct: 461 KAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGK------------FNVLIT 508
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
YD+++ D+ FL +I W Y I+DE RLKN S L L + + RRLL+TGTPIQN+L
Sbjct: 509 HYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSL 568
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAP--KRGKI----KEQFT---SLKGIL 265
ELW+L++F +P +F ++ F F +AP RG + +E+ L ++
Sbjct: 569 QELWSLLNFLLPHIFNSVQNFEEWF-------NAPFADRGNVSLTDEEELLIIHRLHHVI 621
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV-LQKKVYASILRKELPKL--LALSSRTANHQS 322
F+LRR K ++ + LP T++ + + + K++ + + L + + +S
Sbjct: 622 RPFILRRKKDEVEK----FLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKS 677
Query: 323 LQN-----------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
LQN ASGK +LD LL KL +GHR+LLF+Q
Sbjct: 678 LQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKFELLDRLLPKLRKAGHRILLFSQ 737
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MT+ +D+L+ +L L Y Y RLDG+ + ++R ++ F+ + F+F+
Sbjct: 738 MTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDS-----------PYFMFL 786
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ V LV+ +VEEV
Sbjct: 787 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEV 846
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA++K+ + V+
Sbjct: 847 ILERAKQKMGIDAKVI 862
>gi|330796151|ref|XP_003286132.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum]
gi|325083877|gb|EGC37318.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum]
Length = 2186
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 191/493 (38%), Positives = 268/493 (54%), Gaps = 65/493 (13%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+P+Q+EGL+WL + N +LGDEMGLGKT+Q++S L L+ + GPFLV+ PL
Sbjct: 491 KLRPYQLEGLNWLRYCWFNQRNSILGDEMGLGKTVQSVSILETLRKAHDIRGPFLVVAPL 550
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
+ W E +T + L Y R +R + + + +NV + F+VL+TT
Sbjct: 551 TTIPHWKREFENWT-DMNSLVYHDTGAGRPILRNYEFYFKDKSGKPTNV--VKFNVLITT 607
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE-HFLMPRRLLMTGTPIQNNL 214
Y++ + D+ +LS+I W Y +IDEA RLKN L + L+ HF LL+TGTP+QNN
Sbjct: 608 YEMAISDRSYLSKIKWKYLVIDEAHRLKNKQCKLTSELKTYHF--DHLLLLTGTPLQNNT 665
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F PS F L +FL F D K EQ + L+ +L ++LRR K
Sbjct: 666 QELWALLNFLEPSKFNKLAEFLVEFGDL----------KQAEQVSKLQNLLKPYLLRRMK 715
Query: 275 QKLVECGHLMLPPLTEI--TVLQKKVYASILRKEL------------PKLLALS---SRT 317
+++ + + E+ T++QKK Y +I K P LL + +
Sbjct: 716 ERVEKSIAPKEETIVEVELTMVQKKYYRAIYEKNFAFLRKNCKGQQGPSLLNIMMELRKC 775
Query: 318 ANHQSLQN---------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
NH L ASGKLV++D LL KL GH+VL+F+QM
Sbjct: 776 CNHPYLIKGVEHSETNEISEKDEVYTKLIQASGKLVLVDKLLPKLKAGGHKVLIFSQMVS 835
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D+L R Y +ER+DGSI+ +R AAI FS + D FVF++ T
Sbjct: 836 VLDILDDYLTFRGYPHERIDGSIKGNDRQAAIDRFSKPDS-----------DRFVFLLCT 884
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL AADTVI ++ DWNPQ D QA R HRIGQ V LVT++T E ++
Sbjct: 885 RAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYRLVTKNTYERLMFD 944
Query: 477 RAERKLRLSHNVV 489
RA +KL L V+
Sbjct: 945 RASKKLGLDRVVL 957
>gi|14091823|gb|AAK53826.1|AC011806_3 Putative SWI/SNF related, matrix associated, actin dependent
regulator of chromatin [Oryza sativa]
gi|15528681|dbj|BAB64747.1| putative DNA-dependent ATPase [Oryza sativa Japonica Group]
Length = 1122
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 295/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 227 IKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 286
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+ E+ +F P L ++++G E+R +IR + + P FDV
Sbjct: 287 APKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENL------------LQPGKFDVC 334
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 335 VTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMR-IYNTNYRLLITGTPLQN 393
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 394 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 446
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 447 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKRLLNIAMQL 502
Query: 317 --TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L A +GK+V+LD LL KL + RVL+F+QMT+ LD
Sbjct: 503 RKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 562
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 563 ILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFN-----------KPGSEKFVFLLSTRAG 611
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD V+ Y+ DWNPQ D QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 612 GLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 671
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V DDL ++ FG + F K I +E+ D +
Sbjct: 672 KKLALDALVIQQG----RLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 727
Query: 536 GLNSMVE 542
G + E
Sbjct: 728 GEETTAE 734
>gi|154316737|ref|XP_001557689.1| hypothetical protein BC1G_03786 [Botryotinia fuckeliana B05.10]
Length = 1130
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 183/497 (36%), Positives = 272/497 (54%), Gaps = 79/497 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +QV GL+WL+ + G++ +L DEMGLGKTLQ ISFL YL+ GP L++
Sbjct: 182 IQGQMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISFLGYLRHIMDITGPHLIV 241
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S D W E ++TP++ VL G +E+R N+ + E + ++ FDV
Sbjct: 242 VPKSTLDNWKREFIRWTPEVNVLVLQGAKEERNNL---INERLIDEK---------FDVC 289
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T Y+++L ++ L + W Y IIDEA R+KN S L V+R F RLL+TGTP+QN
Sbjct: 290 ITRYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIR-LFNSRNRLLITGTPLQN 348
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT---SLKGILSAFM 269
NL ELWAL++F +P VFG F F G+ ++Q T L +L F+
Sbjct: 349 NLHELWALLNFLLPDVFGDAEAFDQWFS-----------GQQEDQDTVVQQLHRVLRPFL 397
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKL 310
LRR K + + L P E+ + +Q K Y IL K++ +L
Sbjct: 398 LRRVKADVEKS----LLPKKEVNLYIGMSDMQVKWYKKILEKDIDAVNGAGGKRESKTRL 453
Query: 311 LALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
L + + NH L A +GK+V+LD LL ++ +G RVL+F+
Sbjct: 454 LNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVFNAGKMVMLDKLLTRMKKAGSRVLIFS 513
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM++ LDIL+D+ R+Y Y R+DG E+R AI ++ + + FVF
Sbjct: 514 QMSRLLDILEDYCVFREYKYCRIDGGTAHEDRIQAIDDYNKPDS-----------EKFVF 562
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
+++TRAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V+ VTE+ +EE
Sbjct: 563 LLTTRAGGLGINLTSADIVVLYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTENAIEE 622
Query: 473 VIMRRAERKLRLSHNVV 489
++ RA +KLRL V+
Sbjct: 623 KVLERAAQKLRLDQLVI 639
>gi|401625980|gb|EJS43951.1| chd1p [Saccharomyces arboricola H-6]
Length = 1470
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/506 (36%), Positives = 278/506 (54%), Gaps = 74/506 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + G N +L DEMGLGKT+Q ++F+S+L F++ GP +++ P
Sbjct: 376 GELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVP 435
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W+ K+ P L + Y+G ++ R IR YE Q + F+VLLT
Sbjct: 436 LSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIRE--YEFYT-NPQAKGKKTMKFNVLLT 492
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L I W Y +DEA RLKN S LY L F + R+L+TGTP+QNN+
Sbjct: 493 TYEYILKDRAELGSIKWQYMAVDEAHRLKNAESSLYESLNS-FKVANRMLITGTPLQNNI 551
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL++F MP F T++Q + F++ +E L + F+LRR K
Sbjct: 552 KELAALVNFLMPGRF-TIDQEID-FENQDEEQ--------EEYIHDLHRRIQPFILRRLK 601
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 602 KDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNEL 657
Query: 315 SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L + A SGK+V+LD LL +L GHRVL
Sbjct: 658 KKASNHPYLFDNAEERVLQKFGDGKMTRENILRGLIMSSGKMVLLDQLLTRLKKDGHRVL 717
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + ND
Sbjct: 718 IFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS----------ND- 766
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++ T
Sbjct: 767 FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDT 826
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD 495
VEE ++ RA +K+ L + ++ V D
Sbjct: 827 VEEEVLERARKKMILEYAIISLGVTD 852
>gi|241948531|ref|XP_002416988.1| ATP-dependent chromodomain helicase, putative; chromodomain protein
1, putative [Candida dubliniensis CD36]
gi|223640326|emb|CAX44576.1| ATP-dependent chromodomain helicase, putative [Candida dubliniensis
CD36]
Length = 1406
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 196/560 (35%), Positives = 303/560 (54%), Gaps = 84/560 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q ++FLS+L +++ GP L
Sbjct: 352 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHL 411
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP-F 149
V+ PLS W K+ P + + Y+G E R+ +R + ++ N + P F
Sbjct: 412 VVVPLSTVPAWQETFEKWAPDVNCVYYMGNGEARKTVR---------EYELYNQNNKPKF 462
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ +L D+ L W + +DEA RLKN S LY L+ F + RLL+TGTP
Sbjct: 463 NVLLTTYEYILKDRTELGAFKWQFLAVDEAHRLKNAESSLYEALK-SFRVSNRLLITGTP 521
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF-TSLKGILSAF 268
+QNN+ EL AL +F MP F T++Q + + + S +EQ+ L+ +S F
Sbjct: 522 LQNNVKELAALCNFLMPGKF-TIDQEIDF--ETIDSE--------QEQYIKDLQKKISPF 570
Query: 269 MLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALS-------- 314
+LRR K+ + + LP +E ++ +Q + Y +I+ K L A +
Sbjct: 571 ILRRLKKDVEKS----LPSKSERILRVELSDIQTEYYKNIITKNYAALNAGNRGSQISLL 626
Query: 315 ------SRTANH-----------------QSLQNT------ASGKLVVLDLLLKKLYNSG 345
+ +NH S +NT +SGK+V+L+ LL +L G
Sbjct: 627 NIMSELKKASNHPYLFDGAEEKVLDKEGSHSRENTLKGIVMSSGKMVLLEQLLSRLKKEG 686
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
HRVL+F+QM + LDIL D++ ++ Y ++RLDG++ + +R AI HF+ A
Sbjct: 687 HRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKRKIAIDHFN-----------AL 735
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
G+ F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV V
Sbjct: 736 GSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFV 795
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVE--TDDLRSII-FGLHLFDPK 522
++ TVEE I+ RA +K+ L + ++ + D K + E T++L I+ FG +
Sbjct: 796 SKDTVEEQILERARKKMVLEYAIISLGITDPNAKSSSKTEPSTNELSQILKFGAGTMFKE 855
Query: 523 AINNEESDDLRLSGLNSMVE 542
N ++ ++L L + S E
Sbjct: 856 NNNQQKLENLNLDDVLSHAE 875
>gi|406607606|emb|CCH41077.1| Chromodomain-helicase-DNA-binding protein [Wickerhamomyces
ciferrii]
Length = 1487
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 200/582 (34%), Positives = 301/582 (51%), Gaps = 87/582 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q +SFLS+L +++ GP
Sbjct: 345 KFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPH 404
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
+V+ PLS W K++P L + Y+G E R+ IR YE N + F
Sbjct: 405 IVVVPLSTIPAWQETFEKWSPDLNCVYYLGNTEARKTIRD--YE-------FYNNKKIKF 455
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ +L D L I W + +DEA RLKN S LY L F + RLL+TGTP
Sbjct: 456 NVLLTTYEYILKDASELGSIKWQFLAVDEAHRLKNAESSLYESLN-SFKVSNRLLITGTP 514
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT-SLKGILSAF 268
+QNN+ EL AL++F MP F + D HS+ +E + L+ + F
Sbjct: 515 LQNNIKELAALVNFLMPGKFEIDEEI-----DFEHSNDD------QENYIRDLQNKVKPF 563
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKL------------ 310
+LRR K+ + + LP T E++ LQ + Y +IL K L
Sbjct: 564 ILRRLKKDVEKS----LPSKTERILRVELSDLQTQYYKNILTKNYAALNQGSKGAHVSLL 619
Query: 311 --LALSSRTANHQSLQNTA----------------------------SGKLVVLDLLLKK 340
++ + +NH L + A SGK+V+LD LL +
Sbjct: 620 NVMSELKKASNHPYLFDAAEDQVLAKFGSSLNGVHSREDILRGMIMSSGKMVLLDQLLTR 679
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
L GHRVL+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + +
Sbjct: 680 LKKDGHRVLIFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNEPDSTD-- 737
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+
Sbjct: 738 ---------FVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVM 788
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVK-ERTAVETDDLRSII-FGLHL 518
V++ TVEE ++ RA +K+ L + ++ V D K ++ T +L I+ FG
Sbjct: 789 VYRFVSKDTVEEEVLERARKKMILEYAIISLGVTDGTGKSKKNEPSTGELSEILKFGAGN 848
Query: 519 FDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKF 560
+ N ++ +DL L + + E + S G +F
Sbjct: 849 MFKASDNQKKLEDLNLDDVLNHAEDHVTTPEMGESNLGGEEF 890
>gi|6671969|gb|AAF23228.1|AC013454_15 putative transcriptional regulator [Arabidopsis thaliana]
Length = 1132
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 178/496 (35%), Positives = 275/496 (55%), Gaps = 75/496 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ +Q+EGL W++ + +N +L DEMGLGKT+Q IS ++YL ++ PGP+L++ P
Sbjct: 431 GELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAP 490
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
+V WV+E A + P + Y G E+R+ IR + K F+VL+T
Sbjct: 491 KAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGK------------FNVLIT 538
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
YD+++ D+ FL +I W Y I+DE RLKN S L L + + RRLL+TGTPIQN+L
Sbjct: 539 HYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSL 598
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAP--KRGKI----KEQFT---SLKGIL 265
ELW+L++F +P +F ++ F F +AP RG + +E+ L ++
Sbjct: 599 QELWSLLNFLLPHIFNSVQNFEEWF-------NAPFADRGNVSLTDEEELLIIHRLHHVI 651
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV-LQKKVYASILRKELPKL--LALSSRTANHQS 322
F+LRR K ++ + LP T++ + + + K++ + + L + + +S
Sbjct: 652 RPFILRRKKDEVEK----FLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKS 707
Query: 323 LQN-----------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
LQN ASGK +LD LL KL +GHR+LLF+Q
Sbjct: 708 LQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKFELLDRLLPKLRKAGHRILLFSQ 767
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MT+ +D+L+ +L L Y Y RLDG+ + ++R ++ F+ + F+F+
Sbjct: 768 MTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDS-----------PYFMFL 816
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ V LV+ +VEEV
Sbjct: 817 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEV 876
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA++K+ + V+
Sbjct: 877 ILERAKQKMGIDAKVI 892
>gi|414877443|tpg|DAA54574.1| TPA: putative chromatin-remodeling factor family [Zea mays]
Length = 913
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 298/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 33 IKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIAGPHMVV 92
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+ E+ +F P L ++++G E+R +IR + + P FDV
Sbjct: 93 APKSTLGNWMKEIQRFCPILRAVKFLGNPEERNHIRDNL------------LQPGKFDVC 140
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 141 VTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMR-IYNTNYRLLITGTPLQN 199
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 200 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 252
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 253 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKRLLNIAMQL 308
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 309 RKCCNHPYLFQGAEPGPPYTTGEHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 368
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ + G++ FVF++STRAG
Sbjct: 369 ILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFN-----------SPGSEKFVFLLSTRAG 417
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD V+ Y+ DWNPQ D QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 418 GLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 477
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V DDL ++ FG + F K I +E+ D +
Sbjct: 478 KKLALDALVIQQG----RLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 533
Query: 536 GLNSMVE 542
G + E
Sbjct: 534 GEETTAE 540
>gi|391331672|ref|XP_003740267.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Metaseiulus occidentalis]
Length = 1925
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 198/558 (35%), Positives = 286/558 (51%), Gaps = 82/558 (14%)
Query: 21 DGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLK 80
DGQ P E G +L P+Q+EG++WL + + +L DEMGLGKT+Q I+FL L
Sbjct: 679 DGQPPY-VVENG--NQLHPYQLEGINWLRFSWSQRTDTILADEMGLGKTIQTITFLYSLY 735
Query: 81 FSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQ 140
+S GPFLV PLS W E + P++ V+ YVG+++ R IR + + +
Sbjct: 736 KEGLSRGPFLVAVPLSTLINWEREFELWAPEMYVVTYVGDKDSRAVIRENEFSFEDKAVR 795
Query: 141 MSNV-------SPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
SN +P+ F LLT+Y+++ MDQ L I W ++DEA RLK+ S + VL
Sbjct: 796 SSNKVFKMKKDAPIKFHCLLTSYELISMDQALLGSIDWHVLVVDEAHRLKSNQSKFFKVL 855
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGK 253
+ + + +LL+TGTP+QNNL EL+ LM+F P+ F L FL+ F D
Sbjct: 856 SQ-YPIRYKLLLTGTPLQNNLEELFHLMNFLSPANFNDLQGFLNEFADIAK--------- 905
Query: 254 IKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE- 306
+EQ L +L +LRR K ++ +P +E V +QKK Y IL +
Sbjct: 906 -EEQVKKLHDLLGCHLLRRLKADVL----TGMPSKSEFIVRVELSPIQKKYYKWILTRNY 960
Query: 307 ------------------------------LPKLLALSSRTANHQSLQNT---ASGKLVV 333
P A + R AN N+ + GK++V
Sbjct: 961 DALSIKGGGQSVSLLNIMMDLKKCCNHPFLFPAAQAEAERLANGAFTVNSLVKSCGKMIV 1020
Query: 334 LDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSV 393
+ +++ L GHRVL+F+QMT+ LD+L+DFLE Y YER+DG I R AI F+
Sbjct: 1021 MQKMMRLLKEQGHRVLIFSQMTKMLDLLEDFLEGEGYKYERIDGGITGTMRQEAIDRFNK 1080
Query: 394 QSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRI 453
A + F F++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHR+
Sbjct: 1081 PDA-----------EQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRL 1129
Query: 454 GQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
GQ N V+ VT +VEE + + A++K+ L+H VV + + + E DD+ +
Sbjct: 1130 GQTNKVMIYRFVTRASVEERVTQVAKKKMMLTHLVVRPGMGRQGNAAMSKQELDDI--LR 1187
Query: 514 FGLHLFDPKAINNEESDD 531
FG + +EE DD
Sbjct: 1188 FGTE----ELFKDEEGDD 1201
>gi|125550862|gb|EAY96571.1| hypothetical protein OsI_18476 [Oryza sativa Indica Group]
Length = 1157
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 200/541 (36%), Positives = 299/541 (55%), Gaps = 76/541 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 280 IKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 339
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+ E+ +F P L ++++G E+R +IR + + P FDV
Sbjct: 340 APKSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENL------------LVPGKFDVC 387
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 388 VTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMR-IYNTNYRLLITGTPLQN 446
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + TF D S + ++ +Q L +L F+LRR
Sbjct: 447 NLHELWSLLNFLLPEIFSSA----ETFDDWFQISGENDQHEVVQQ---LHKVLRPFLLRR 499
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 500 LKSD-VEKG---LPPKKETILKVGMSEMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQL 555
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 556 RKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 615
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L + Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 616 ILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFN-----------KPGSEKFVFLLSTRAG 664
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 665 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 724
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ AV D+L ++ FG + F K I +E+ D +
Sbjct: 725 KKLALDALVIQQG----RLAEQKAVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 780
Query: 536 G 536
G
Sbjct: 781 G 781
>gi|449444997|ref|XP_004140260.1| PREDICTED: transcription regulatory protein SNF2-like [Cucumis
sativus]
gi|449481192|ref|XP_004156109.1| PREDICTED: transcription regulatory protein SNF2-like [Cucumis
sativus]
Length = 1092
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 184/485 (37%), Positives = 269/485 (55%), Gaps = 56/485 (11%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+P+Q+EGL W++ + +N +L DEMGLGKT+Q IS ++YL + GP L++ P
Sbjct: 389 GELRPYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLMEYKDVTGPHLIVAP 448
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
+V W+ E + P + + Y G +E+R+ I+ + K F VL+T
Sbjct: 449 KAVLPNWIHEFTTWAPSIAAVLYDGRQEERKAIKEELLSEGK------------FCVLIT 496
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
YD+++ D+ FL +I W Y I+DE RLKN L L + + RRLL+TGTPIQN+L
Sbjct: 497 HYDLIMRDKSFLKKIHWYYMIVDEGHRLKNRDCALAQTL-AGYQIKRRLLLTGTPIQNSL 555
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT--SLKGILSAFMLRR 272
ELW+L++F +P +F ++ F F S +E L ++ F+LRR
Sbjct: 556 QELWSLLNFLLPHIFNSVQNFQEWFNAPFADRSDVTLTDEEELLIIRRLHHVIRPFILRR 615
Query: 273 TKQK----LVECGHLMLPPLTEITVLQKKVY---ASILR--------KELPKLLALSSRT 317
K + L E ++L +++ QK Y SI R K L L +
Sbjct: 616 KKDEVEKYLPEKSQVILK--CDMSAWQKVYYQQVTSIGRVDTGSGKSKSLQNLTMQLRKC 673
Query: 318 ANHQSL-----QNT--------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDF 364
NH L N ASGK +LD LL KL+ +GHRVLLF+QMT+ +DIL+ +
Sbjct: 674 CNHPYLFILGDYNIWRKEEIIRASGKFELLDRLLPKLHRAGHRVLLFSQMTRLMDILEIY 733
Query: 365 LELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLN 424
L+L ++ Y RLDGS + EER A ++ F+ A + F+F++STRAGG+GLN
Sbjct: 734 LQLHEFRYLRLDGSTKTEERGALVKQFN-----------APDSPFFMFLLSTRAGGLGLN 782
Query: 425 LVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRL 484
L ADTVI ++ DWNPQ+D+QA RAHRIGQ V LV+ +VEEVI+ RA++K+ +
Sbjct: 783 LQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVILERAKQKMGI 842
Query: 485 SHNVV 489
V+
Sbjct: 843 DAKVI 847
>gi|401840653|gb|EJT43386.1| CHD1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1468
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 182/506 (35%), Positives = 275/506 (54%), Gaps = 74/506 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + G N +L DEMGLGKT+Q ++F+S+L F++ GP +++ P
Sbjct: 374 GELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVP 433
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W+ K++P L + Y+G ++ R IR YE Q + F+VLLT
Sbjct: 434 LSTMPAWLDTFEKWSPDLNCICYMGNQKSRDTIRE--YEFYT-NPQAKGKKTMKFNVLLT 490
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L I W + +DEA RLKN S LY L F + R+L+TGTP+QNN+
Sbjct: 491 TYEYILKDRAELGGIKWQFMAVDEAHRLKNAESSLYESLNS-FKVANRMLITGTPLQNNI 549
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL++F MP F + +DA +E L + F+LRR K
Sbjct: 550 KELAALVNFLMPGRFTIDQEIDFENQDAEQ----------EEYIHDLHRRIQPFILRRLK 599
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 600 KDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNEL 655
Query: 315 SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L + A SGK+V+LD LL +L GHRVL
Sbjct: 656 KKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVL 715
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + ND
Sbjct: 716 IFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS----------ND- 764
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++ T
Sbjct: 765 FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDT 824
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD 495
VEE ++ RA +K+ L + ++ V D
Sbjct: 825 VEEEVLERARKKMILEYAIISLGVTD 850
>gi|115436572|ref|NP_001043044.1| Os01g0367900 [Oryza sativa Japonica Group]
gi|57012942|sp|Q7G8Y3.2|ISW2_ORYSJ RecName: Full=Probable chromatin-remodeling complex ATPase chain;
AltName: Full=ISW2-like; AltName: Full=Sucrose
nonfermenting protein 2 homolog
gi|54290802|dbj|BAD61441.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group]
gi|57900237|dbj|BAD88342.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group]
gi|58737200|dbj|BAD89475.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group]
gi|113532575|dbj|BAF04958.1| Os01g0367900 [Oryza sativa Japonica Group]
gi|215740512|dbj|BAG97168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618445|gb|EEE54577.1| hypothetical protein OsJ_01780 [Oryza sativa Japonica Group]
Length = 1107
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 295/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 227 IKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 286
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+ E+ +F P L ++++G E+R +IR + + P FDV
Sbjct: 287 APKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENL------------LQPGKFDVC 334
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 335 VTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMR-IYNTNYRLLITGTPLQN 393
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 394 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 446
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 447 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKRLLNIAMQL 502
Query: 317 --TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L A +GK+V+LD LL KL + RVL+F+QMT+ LD
Sbjct: 503 RKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 562
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 563 ILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFN-----------KPGSEKFVFLLSTRAG 611
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD V+ Y+ DWNPQ D QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 612 GLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 671
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V DDL ++ FG + F K I +E+ D +
Sbjct: 672 KKLALDALVIQQG----RLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 727
Query: 536 GLNSMVE 542
G + E
Sbjct: 728 GEETTAE 734
>gi|218197912|gb|EEC80339.1| hypothetical protein OsI_22408 [Oryza sativa Indica Group]
Length = 4284
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 191/485 (39%), Positives = 265/485 (54%), Gaps = 74/485 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+ GL WL+ Y +N +L DEMGLGKT+Q IS L YL ++ GPFLV+ P
Sbjct: 1014 GKLREYQMNGLRWLVSLYNNNLNGILADEMGLGKTVQVISLLCYLMETKNDRGPFLVVVP 1073
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
SV GW SE+ + P + + Y G E+RR + + M H K F+VLLT
Sbjct: 1074 SSVLPGWESELNFWAPSINKIAYAGPPEERRKLFKEMIVHQK------------FNVLLT 1121
Query: 155 TYDVVL--MDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
TY+ ++ D+ LS+I W Y IIDE R+KN S L L+ H+ RLL+TGTP+QN
Sbjct: 1122 TYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYRSSHRLLLTGTPLQN 1180
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSS------------------------SA 248
NL ELWAL++F +P++F + F F S+ SA
Sbjct: 1181 NLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDSSTEEVENELPEKIERLVRCWPSA 1240
Query: 249 PKRGKIKEQFTSLKGILSAFMLRRTKQKLVE----CGHLMLPPLTEITVLQKKVYASILR 304
++ IK +L GI A +R ++E C H P L+++ V + + Y + R
Sbjct: 1241 YQKLLIKRVEENLGGI-GAVKVRSVHNTVMELRNICNH---PYLSQLHVEEIEGY--LPR 1294
Query: 305 KELPKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDF 364
LP +L L GKL +LD LL KL +GHRVLLF+ MT+ LD+++D+
Sbjct: 1295 HYLPSILRLC--------------GKLEMLDRLLPKLKATGHRVLLFSTMTRLLDVMEDY 1340
Query: 365 LELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLN 424
L +KY Y RLDG +ER A I F+ ++ AF+F++S RAGGVG+N
Sbjct: 1341 LVWKKYKYLRLDGHTSGQERGALIDKFNNPNS-----------QAFIFLLSIRAGGVGVN 1389
Query: 425 LVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRL 484
L AADTVI ++ DWNPQVD QA RAHRIGQ VL + L T TVEE + AE KL +
Sbjct: 1390 LQAADTVIIFDTDWNPQVDLQAQARAHRIGQKKEVLVLRLETVQTVEEQVRASAEHKLGV 1449
Query: 485 SHNVV 489
++ +
Sbjct: 1450 ANQSI 1454
>gi|357447407|ref|XP_003593979.1| Chromatin remodeling complex subunit [Medicago truncatula]
gi|355483027|gb|AES64230.1| Chromatin remodeling complex subunit [Medicago truncatula]
Length = 1066
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 300/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS + YL + GP +V+
Sbjct: 187 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEFRGIKGPHMVV 246
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G E+RR+IR + K FDV
Sbjct: 247 APKSTLGNWMNEIRRFCPILRAVKFLGNPEERRHIREDLLVAGK------------FDVC 294
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 295 VTSFEMAIKEKSTLRRFSWRYIIIDEAHRIKNENSLLSKTMR-IYNTNYRLLITGTPLQN 353
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 354 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 406
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ LQK+ Y ++L+K+L +LL ++
Sbjct: 407 LKSD-VEKG---LPPKKETILKVGMSQLQKQYYKALLQKDLEVVNAGGERKRLLNIAMQL 462
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L T++GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 463 RKCCNHPYLFQGAEPGPPYTTGDHLITSAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 522
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ ++R A+I F+ G++ FVF++STRAG
Sbjct: 523 ILEDYLMFRGYQYCRIDGNTGGDDRDASIDAFN-----------KPGSEKFVFLLSTRAG 571
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 572 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 631
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ FG + F K I +E+ D +
Sbjct: 632 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 687
Query: 536 GLNSMVE 542
G + E
Sbjct: 688 GEEATAE 694
>gi|222635334|gb|EEE65466.1| hypothetical protein OsJ_20855 [Oryza sativa Japonica Group]
Length = 4273
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 181/465 (38%), Positives = 258/465 (55%), Gaps = 61/465 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+ GL WL+ Y +N +L DEMGLGKT+Q IS L YL ++ GPFLV+ P
Sbjct: 997 GKLREYQMNGLRWLVSLYNNNLNGILADEMGLGKTVQVISLLCYLMETKNDRGPFLVVVP 1056
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
SV GW SE+ + P + + Y G E+RR + + M H K F+VLLT
Sbjct: 1057 SSVLPGWESELNFWAPSINKIAYAGPPEERRKLFKEMIVHQK------------FNVLLT 1104
Query: 155 TYDVVL--MDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
TY+ ++ D+ LS+I W Y IIDE R+KN S L L+ H+ RLL+TGTP+QN
Sbjct: 1105 TYEYLMNKHDRPKLSKIQWHYIIIDEGHRIKNASCKLNADLK-HYRSSHRLLLTGTPLQN 1163
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTS-----LKGILSA 267
NL ELWAL++F +P++F + F F S+ +++ + ++ SA
Sbjct: 1164 NLEELWALLNFLLPNIFNSSEDFSQWFNKPFESNGDSSTEEVENELPEKIERLVRCWPSA 1223
Query: 268 F---MLRRTKQKLVECGHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRTANHQSLQ 324
+ +++R ++ L G + K+ + R LP +L L
Sbjct: 1224 YQKLLIKRVEENLGGIGAV-------------KIEGYLPRHYLPSILRLC---------- 1260
Query: 325 NTASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEER 384
GKL +LD LL KL +GHRVLLF+ MT+ LD+++D+L +KY Y RLDG +ER
Sbjct: 1261 ----GKLEMLDRLLPKLKATGHRVLLFSTMTRLLDVMEDYLVWKKYKYLRLDGHTSGQER 1316
Query: 385 FAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDK 444
A I F+ ++ AF+F++S RAGGVG+NL AADTVI ++ DWNPQVD
Sbjct: 1317 GALIDKFNNPNS-----------QAFIFLLSIRAGGVGVNLQAADTVIIFDTDWNPQVDL 1365
Query: 445 QALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
QA RAHRIGQ VL + L T TVEE + AE KL +++ +
Sbjct: 1366 QAQARAHRIGQKKEVLVLRLETVQTVEEQVRASAEHKLGVANQSI 1410
>gi|297833338|ref|XP_002884551.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330391|gb|EFH60810.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1130
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 177/496 (35%), Positives = 275/496 (55%), Gaps = 75/496 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ +Q+EGL W++ + +N +L DEMGLGKT+Q IS ++YL ++ PGP+L++ P
Sbjct: 430 GELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAP 489
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
+V WV+E A + P + Y G E+R+ IR + K F+VL+T
Sbjct: 490 KAVLPNWVNEFATWVPSIAAFLYDGRLEERKAIREKIAGEGK------------FNVLIT 537
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
YD+++ D+ FL +I W Y I+DE RLKN S L L + + RRLL+TGTPIQN+L
Sbjct: 538 HYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESALAKTLVTGYRIKRRLLLTGTPIQNSL 597
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAP--KRGKI----KEQFT---SLKGIL 265
ELW+L++F +P +F ++ F F +AP RG + +E+ L ++
Sbjct: 598 QELWSLLNFLLPHIFNSVQNFEEWF-------NAPFADRGNVSLTDEEELLIIHRLHHVI 650
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV-LQKKVYASILRKELPKL--LALSSRTANHQS 322
F+LRR K ++ + LP T++ + + + K++ + + L + + +S
Sbjct: 651 RPFILRRKKDEVEK----FLPGKTQVILKCDMSAWQKVYYKQVTDMGRVGLQTGSGKSKS 706
Query: 323 LQN-----------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
LQN ASGK +LD LL KL +GHR+LLF+Q
Sbjct: 707 LQNLTMQLRKCCNHPYLFVGGDYNMWKKPEIVRASGKFELLDRLLPKLRKAGHRILLFSQ 766
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MT+ +D+L+ +L L Y Y RLDG+ + ++R ++ F+ + F+F+
Sbjct: 767 MTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFNEPDS-----------PYFMFL 815
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ V LV+ ++EEV
Sbjct: 816 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEV 875
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA++K+ + V+
Sbjct: 876 ILERAKQKMGIDAKVI 891
>gi|426197234|gb|EKV47161.1| chromodomain-helicase DNA-binding protein [Agaricus bisporus var.
bisporus H97]
Length = 1298
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 189/494 (38%), Positives = 267/494 (54%), Gaps = 74/494 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + G N +L DEMGLGKT+Q ++F+S+L GPFLV+ P
Sbjct: 248 GELKDFQLTGLNWLAYVWSNGDNGILADEMGLGKTVQTVAFISWLFHEMQQYGPFLVIVP 307
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W + + P + V+ Y+G R IR + ++ +M +VLLT
Sbjct: 308 LSTITAWQMQFNLWAPDINVITYIGTAPAREVIRTHEFGPSNKKLKM--------NVLLT 359
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++ L D L I W +DEA RLKN S LY LR F +LL+TGTP+QNN+
Sbjct: 360 TYELTLRDAKELVDIKWQLLAVDEAHRLKNSESQLYEALR-CFSAASKLLITGTPLQNNV 418
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +LMHF MP F N+F DA H KIKE L L + MLRR K
Sbjct: 419 RELLSLMHFLMPDKFALTNEF--DLNDADHEE------KIKE----LHLQLESLMLRRLK 466
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ ++ LP +E ++ LQ Y +IL K L+ ++
Sbjct: 467 RDVLTS----LPTKSERILRVEMSALQTHFYKNILTKNFAGLVKSANGNNNISLLNIAME 522
Query: 316 --RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ ANH L + A SGK+V+LD LL +L GHRVL+F+QM +
Sbjct: 523 LKKAANHPYLFDGAETRSDSNEETLKGLVMNSGKMVLLDKLLARLRQDGHRVLIFSQMVR 582
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++ LR Y ++RLDG + +E+R +I HF+ A G+ F F++ST
Sbjct: 583 MLDILSDYMSLRGYIHQRLDGMVASEQRKKSIAHFN-----------APGSPDFAFLLST 631
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL A+TVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE ++
Sbjct: 632 RAGGLGINLETANTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVLE 691
Query: 477 RAERKLRLSHNVVG 490
RA++K+ L + ++
Sbjct: 692 RAKKKMVLEYAIIN 705
>gi|353227245|emb|CCA77762.1| probable CHD1-transcriptional regulator [Piriformospora indica DSM
11827]
Length = 1415
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 194/492 (39%), Positives = 269/492 (54%), Gaps = 71/492 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + G N +L DEMGLGKT+Q ++FLSYL +Q GPFLV+ P
Sbjct: 385 GELKDFQLTGLNWLAFLWHHGDNGVLADEMGLGKTVQTVAFLSYLFHAQQQYGPFLVVVP 444
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W S+ A + P L V+ Y+G R IR YE + + +V+LT
Sbjct: 445 LSTITAWQSQFAYWAPDLNVVCYMGSAPAREVIRE--YEFGANFPKR-----IKANVVLT 497
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++VL D + I W +DEA RLKN S LY L +LL+TGTP+QNN+
Sbjct: 498 TYEMVLKDAVEMQAIRWQCIAVDEAHRLKNSESQLYQAL-TGCSAASKLLITGTPLQNNV 556
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL ALMHF MP F + F D + KIKE L L +MLRR K
Sbjct: 557 KELLALMHFLMPDKFSLASNFELNDPD--------QESKIKE----LHKDLEKYMLRRMK 604
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKL------------LAL-SS 315
++++ LP TE ++ Q +Y +IL + L +A+
Sbjct: 605 AEVIKS----LPTKTERILRVELSATQANLYKNILTRNFAALAKGGTTNISLLNIAMECK 660
Query: 316 RTANH--------QSLQNT---------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ ANH Q +N +SGKLV+LD LL +L GHRVL+F+QM + L
Sbjct: 661 KAANHPFLFEGVEQPAENKEEAFKNLLMSSGKLVLLDKLLARLKADGHRVLIFSQMVRML 720
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
+IL D++ LR Y ++RLDG++ ++ R +I HF+ A G+ F F++STRA
Sbjct: 721 NILSDYMALRGYIFQRLDGNVSSDMRKKSIEHFN-----------APGSPDFAFLLSTRA 769
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL ADTVI Y+ DWNPQ D QA+ RAHRIGQ HV LV++ T+EE I+ RA
Sbjct: 770 GGLGINLETADTVIIYDSDWNPQNDLQAMARAHRIGQKAHVNVYRLVSKDTMEEDILERA 829
Query: 479 ERKLRLSHNVVG 490
++K+ L + ++
Sbjct: 830 KKKMVLEYAIIN 841
>gi|167392422|ref|XP_001740146.1| chromodomain helicase DNA binding protein [Entamoeba dispar SAW760]
gi|165895824|gb|EDR23413.1| chromodomain helicase DNA binding protein, putative [Entamoeba dispar
SAW760]
Length = 1623
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 192/524 (36%), Positives = 290/524 (55%), Gaps = 80/524 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EGL+WL+ + G +L DEMGLGKT+Q ++F +L+ Q PGPFLV+ PLS
Sbjct: 649 LRSYQMEGLNWLVFNWCRGKGCILADEMGLGKTVQVVAFFEHLRSFQKLPGPFLVVTPLS 708
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV-KEQSQMSNVSPLPFDVLLTT 155
+ W E+ ++T + V+ Y+G +E R+ I+ + ++ K++ ++S + F L+TT
Sbjct: 709 TLEHWRREINEWT-DMNVVVYLGTKENRQLIQHYEWFYLNKDEKEIS--KQIKFHALITT 765
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP--RRLLMTGTPIQNN 213
Y++++ D LSQI W T++DEAQRLKN SS L L E +P ++L+TGTPIQNN
Sbjct: 766 YEMIMSDYEILSQIRWQVTVVDEAQRLKNKSSKLNKTLTE---IPSYHKILLTGTPIQNN 822
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ ELW L++F P F +L F F DA K + +L+ + ++LRR
Sbjct: 823 IDELWTLLNFINPENFPSLENFHEKFGDA----------KTADGVKALQTEIQPYLLRRV 872
Query: 274 KQKLVECGHLMLPPLTEI------TVLQKKVYASILRKE---------------LPKLLA 312
K + + +PP EI T++QKK Y ++ K L L+
Sbjct: 873 KGNVEKS----IPPKEEILIEVELTLVQKKYYRALYDKNREFLNKGCVGSNVPHLQNLMI 928
Query: 313 LSSRTANH---------QSLQNT------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
+ NH + + N +SGK+V+LD LL KL GH+VL+F
Sbjct: 929 QLRKVCNHPFLIPGVEEKEIANPEDPESYAQELIKSSGKMVLLDKLLPKLNTDGHKVLIF 988
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+Q+ LDIL+ +L +KY+YERLDGS+R+ +R Q+AI+R + FV
Sbjct: 989 SQLKGVLDILEKYLSYKKYTYERLDGSVRSNDR---------QNAIDRFMK----GERFV 1035
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++ TRAGG+G+NL ADTVI Y+ DWNPQ D QA R HRIGQ V LV+++T E
Sbjct: 1036 FLLCTRAGGIGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVKVYRLVSKNTYE 1095
Query: 472 EVIMRRAERKLRLSHNVVGD-DVVDREV-KERTAVETDDLRSII 513
+ RA KL L ++ + + EV KE + +D+ S++
Sbjct: 1096 RYMFERASMKLGLDQAILSNINNTPGEVNKENEKLSKEDITSLL 1139
>gi|297737012|emb|CBI26213.3| unnamed protein product [Vitis vinifera]
Length = 1110
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 271/488 (55%), Gaps = 59/488 (12%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+P+Q+EGL W++ + +N +L DEMGLGKT+Q IS ++YL ++ GP L++ P
Sbjct: 398 GELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLVENKGVTGPHLIVAP 457
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
+V WV+E + + P + + Y G ++R+ +R + K F+VL+T
Sbjct: 458 KAVLPNWVNEFSTWAPSIAAVLYDGRLDERKALREEISGEGK------------FNVLIT 505
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
YD+++ D+ FL +I W Y I+DE RLKN L L + + RRLL+TGTPIQN+L
Sbjct: 506 HYDLIMRDKAFLKKIDWHYMIVDEGHRLKNHECALARTLVSGYQIQRRLLLTGTPIQNSL 565
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT--SLKGILSAFMLRR 272
ELW+L++F +PS+F ++ F F S +E L ++ F+LRR
Sbjct: 566 QELWSLLNFLLPSIFNSVTNFEEWFNAPFADRSDVSLTDEEELLIIHRLHHVIRPFILRR 625
Query: 273 TKQKLVEC--GHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRTANHQSLQN----- 325
K ++ + G + +++ QK Y + +L + + L + + +SLQN
Sbjct: 626 KKDEVEKYLPGKTQVILKCDMSAWQKAYYHQV--TDLGR-VGLDTGSGKSKSLQNLSMQL 682
Query: 326 ------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
ASGK +LD LL KL +GHRVLLF+QMT+ +DIL
Sbjct: 683 RKCCNHPYLFVGDYNIWQKKEEMVRASGKFELLDRLLPKLQKAGHRVLLFSQMTRLMDIL 742
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+ +L++ + Y RLDGS + EER ++ F+ A + F+F++STRAGG+
Sbjct: 743 EIYLQMNEIKYLRLDGSTKTEERGTKLKQFN-----------APDSPYFMFLLSTRAGGL 791
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ V LV+ ++EEVI+ RA++K
Sbjct: 792 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 851
Query: 482 LRLSHNVV 489
+ + V+
Sbjct: 852 MGIDAKVI 859
>gi|365760981|gb|EHN02659.1| Chd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1468
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 183/506 (36%), Positives = 281/506 (55%), Gaps = 74/506 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + G N +L DEMGLGKT+Q ++F+S+L F++ GP +++ P
Sbjct: 374 GELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVP 433
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W+ K++P L + Y+G ++ R IR YE Q + F+VLLT
Sbjct: 434 LSTMPAWLDTFEKWSPDLNCICYMGNQKSRDTIRE--YEFYT-NPQAKGKKTMKFNVLLT 490
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L I W + +DEA RLKN S LY L F + R+L+TGTP+QNN+
Sbjct: 491 TYEYILKDRAELGGIKWQFMAVDEAHRLKNAESSLYESLNS-FKVANRMLITGTPLQNNI 549
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL++F MP F T++Q + F++ + + +E L + F+LRR K
Sbjct: 550 KELAALVNFLMPGRF-TIDQEID-FEN--------QDAEQEEYIHDLHRRIQPFILRRLK 599
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 600 KDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNEL 655
Query: 315 SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L + A SGK+V+LD LL +L GHRVL
Sbjct: 656 KKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVL 715
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + ND
Sbjct: 716 IFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS----------ND- 764
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++ T
Sbjct: 765 FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDT 824
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD 495
VEE ++ RA +K+ L + ++ V D
Sbjct: 825 VEEEVLERARKKMILEYAIISLGVTD 850
>gi|378756035|gb|EHY66060.1| transcription activator [Nematocida sp. 1 ERTm2]
Length = 862
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 191/516 (37%), Positives = 280/516 (54%), Gaps = 78/516 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+T L+ +Q+EGL+WLI Y +N +L DEMGLGKTLQ IS L YL ++ + P L++
Sbjct: 66 ITGTLRHYQIEGLNWLINMYEKKINCILADEMGLGKTLQTISLLGYLYTAKKNKLPNLLI 125
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W +E KF P ++ + + R++IR ++ + L +
Sbjct: 126 VPKSTLQNWKNEFKKFMPGVKTIIF---HCSRKDIR----------TKAKELQELDYIAC 172
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP--RRLLMTGTPI 210
+TTY++ L + L + W Y +IDEA R+KN +VL V+R ++P RLL+TGTP+
Sbjct: 173 ITTYEMCLAGKTQLQSVEWQYIVIDEAHRIKNEQTVLSKVVR---IIPCAHRLLLTGTPL 229
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDA-VHSSSAPKRGKIKEQFTSLKGILSAFM 269
QNN+ ELWAL++F P VF F DA V SSS E L+ +L F+
Sbjct: 230 QNNIHELWALLNFLAPEVFSDGEGF-----DAWVESSSNDVDN---ETVDKLRNLLGLFI 281
Query: 270 LRRTKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKELPKLLALSSR-------- 316
LRR K + + +LP T +T +Q+ Y IL K+ L+ S+
Sbjct: 282 LRREKADVEKS---LLPKKIINLYTPLTEMQRTWYKMILEKDAENLVNEGSKMQLMNIVC 338
Query: 317 ----TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
NH L + A SGK+++LD LL L G RVL+F+QMT+
Sbjct: 339 QLRKCCNHPYLFDGAEPGPPYTTGEHIIDNSGKMLILDKLLVHLKQKGSRVLIFSQMTRM 398
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D+ LR++ Y R+DGS E+R AI F+ ++ + F+F++STR
Sbjct: 399 LDILEDYCNLRQHEYCRIDGSTSTEDRCEAIEEFNKPNS-----------EMFIFLLSTR 447
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL AD VI Y+ DWNPQ+D QA RAHRIGQ V N +TE+T+EE I+ R
Sbjct: 448 AGGLGINLATADVVIVYDNDWNPQMDLQAQDRAHRIGQKKQVFVFNFLTENTIEEKILER 507
Query: 478 AERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
A +KL+L + +V + K+ A+ ++L SI+
Sbjct: 508 AMKKLKLD-----EIIVQNQKKKDNAISQNELLSIL 538
>gi|407040391|gb|EKE40105.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
nuttalli P19]
Length = 1243
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 185/490 (37%), Positives = 274/490 (55%), Gaps = 68/490 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+ +Q+EG++W+ + NV+L DEMGLGKT+Q I+F+ +L + GPFLV+
Sbjct: 346 VKNKLRDYQIEGVNWITYAFSQNTNVILADEMGLGKTVQTITFIKHLYDNYNIIGPFLVI 405
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRT-MYEHVKEQSQMSNVSPLPFDV 151
PLS W E K+ PKL + Y G+ E R IR+T M+ + K + F+V
Sbjct: 406 VPLSTISNWSKEFNKWAPKLNCVVYTGDGESRAIIRKTEMFGNKK--------GTIKFNV 457
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
LLT++++V+ DQ +Q W YT++DEA RLKN LY VL +LL+TGTP+Q
Sbjct: 458 LLTSFELVIKDQDVFNQFHWKYTVVDEAHRLKNNEGQLYEVLM-RTTTENKLLITGTPLQ 516
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
N L ELW+L+HF P F + +F T+ +V + E+ + L ++LR
Sbjct: 517 NTLKELWSLLHFLHPKKFISFEEFEKTY--SVEGT---------EEINKIHNELKPYLLR 565
Query: 272 RTKQKLVECGHLMLPP------LTEITVLQKKVYASILRK-------------------- 305
R K+ + + LPP E++ +QK+ Y I+ K
Sbjct: 566 RMKKDVEKS----LPPKKERILRVELSPIQKQYYRWIITKNSDALKKAVQQQKTSLMNIC 621
Query: 306 -ELPKLLA---LSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
EL KL L + N ++ +N + GK+++LD LL KL +GHRVL+F+QM + LD
Sbjct: 622 MELKKLCNHPILINELMNSENEENLIQSCGKMILLDKLLVKLKETGHRVLIFSQMVRMLD 681
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
+L ++L R ++Y+RLDG++ E R A+ HF+ + + + FVF++STRAG
Sbjct: 682 VLSNYLHFRGFNYQRLDGAMGREARQRAMDHFNAKDSTD-----------FVFLLSTRAG 730
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL ADTVI Y+ DWNPQ D QA R HRIGQ V L TE T+EE I+ A+
Sbjct: 731 GLGINLTTADTVIIYDSDWNPQNDLQAQARCHRIGQEKTVNIYRLATEGTIEEKILLSAK 790
Query: 480 RKLRLSHNVV 489
+KL L H ++
Sbjct: 791 KKLVLDHLII 800
>gi|453083597|gb|EMF11642.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 1439
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 176/506 (34%), Positives = 271/506 (53%), Gaps = 82/506 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL + GP+LV+
Sbjct: 565 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKRQHGPYLVI 624
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W SE ++ P + + Y G QR+N ++Q + N F VL
Sbjct: 625 VPLSTLTNWNSEFERWAPSVNRIVYKGPPAQRKNF--------QQQIRYGN-----FQVL 671
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS+I W + I+DE R+KN S L + + +++ R+++TGTP+QN
Sbjct: 672 LTTYEFIIKDRPILSKIKWLHMIVDEGHRMKNAQSKLSSTISQYYHTRYRIILTGTPLQN 731
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL+ELWA+++F +P++F + F F ++ + ++ E+ L +L
Sbjct: 732 NLTELWAMLNFVLPNIFKSAKSFDEWFNTPFANTGGGDKMELTEEESILVIRRLHKVLRP 791
Query: 268 FMLRRTK-----------QKLVECGHLMLPPLTEITVLQKKVYASIL------------- 303
F+LRR K +++++C ++ LQ K+Y ++
Sbjct: 792 FLLRRLKKDVEKDLPDKQERVIKCN---------LSALQAKLYKQLMLHNRINVIGADGK 842
Query: 304 ---RKELPKLLALSSRTANH-------------QSLQNT----ASGKLVVLDLLLKKLYN 343
+ L +L + NH Q + N +GK +LD +L K
Sbjct: 843 KTGMRGLSNMLMQLRKLCNHPFVFEEVEDQMNPQKMTNDLIWRTAGKFELLDRVLPKFKA 902
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
+GHRVLLF QMTQ ++I++DFL R Y RLDGS +A++R ++ F+
Sbjct: 903 TGHRVLLFFQMTQIMNIMEDFLRFRGIKYLRLDGSTKADDRSELLKLFN----------- 951
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
A ++ F F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V +
Sbjct: 952 APDSEYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILR 1011
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVV 489
L+T ++VEE I+ RA+ KL + V+
Sbjct: 1012 LITSNSVEEKILERAQYKLDMDGKVI 1037
>gi|406695986|gb|EKC99283.1| chromatin structure remodeling complex protein STH1 [Trichosporon
asahii var. asahii CBS 8904]
Length = 1432
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 271/497 (54%), Gaps = 72/497 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL + PGPFLV+ PLS
Sbjct: 550 LKDYQIKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIEQKHQPGPFLVIVPLS 609
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E ++ P ++ L G +RR +Y ++ F V LTTY
Sbjct: 610 TLTNWTLEFERWAPAVKTLILKGSP----TVRRELYPRIRAGD---------FQVCLTTY 656
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ ++ ++ L++I W + IIDE RLKN S L L E++ RL++TGTP+QNNL E
Sbjct: 657 EYIIKERPLLAKIKWVHMIIDEGHRLKNIKSKLSQTLNEYYSTRHRLILTGTPLQNNLPE 716
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSAFMLR 271
LWAL++F +P +F ++ F F ++ ++ ++ E+ L +L F+LR
Sbjct: 717 LWALLNFVLPKIFNSVKSFDEWFNAPFANTGGQEKMEMNEEEALLVVKRLHKVLRPFLLR 776
Query: 272 RTKQKLVECGHLMLPP------LTEITVLQKKVYASILR-KELPKLLALSS--RTANHQ- 321
R K K VE LP T+++ LQ K+Y S+ + K LP L+ R AN Q
Sbjct: 777 RLK-KDVES---ELPDKVEKVIYTKMSALQWKLYESVKKYKTLPTDLSSGKPRRQANLQN 832
Query: 322 ----------------------SLQNT-------ASGKLVVLDLLLKKLYNSGHRVLLFA 352
S+ NT SGK +LD LL KL+ +GH+VL+F
Sbjct: 833 AIMQLRKICNHPFVFREVDEDFSVGNTVDEQIVRTSGKFELLDRLLPKLFATGHKVLIFF 892
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QMT+ + I+ D+ + R + Y RLDGS +AEER + F+ + + VF
Sbjct: 893 QMTEIMSIIADYFDYRGWKYCRLDGSTKAEERQQLLSTFNDPDSPYQ-----------VF 941
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++STRAGG+GLNL +ADTVI Y+ DWNP D QA RAHRIGQ V + L++ TVEE
Sbjct: 942 ILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQDRAHRIGQKKEVRVLRLISSGTVEE 1001
Query: 473 VIMRRAERKLRLSHNVV 489
++++RA+ KL + V+
Sbjct: 1002 LVLQRAQAKLEIDGKVI 1018
>gi|449496695|ref|XP_004160200.1| PREDICTED: LOW QUALITY PROTEIN: putative chromatin-remodeling
complex ATPase chain-like [Cucumis sativus]
Length = 1073
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 192/520 (36%), Positives = 289/520 (55%), Gaps = 73/520 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 194 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEYRGITGPHMVV 253
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G ++RR+IR + K FDV
Sbjct: 254 APKSTLGNWMNEIRRFCPVLRAVKFLGNPDERRDIRENLLVAGK------------FDVC 301
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 302 VTSFEMAIKEKSCLRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYNTNYRLLITGTPLQN 360
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 361 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 413
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 414 LKSD-VEKG---LPPXKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQL 469
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L T++GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 470 RKCCNHPYLFQGAEPGPPYTTGDHLITSAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 529
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 530 ILEDYLMFRGYYYCRIDGNTGGEDRDASIDAFN-----------KPGSEKFVFLLSTRAG 578
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 579 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 638
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL 518
+KL L V+ + E+ V D+L ++ FG +
Sbjct: 639 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEM 674
>gi|401884177|gb|EJT48349.1| chromatin structure remodeling complex protein STH1 [Trichosporon
asahii var. asahii CBS 2479]
Length = 1432
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 271/497 (54%), Gaps = 72/497 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL + PGPFLV+ PLS
Sbjct: 550 LKDYQIKGLQWMISLYNNRLNGILADEMGLGKTIQTISLITYLIEQKHQPGPFLVIVPLS 609
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E ++ P ++ L G +RR +Y ++ F V LTTY
Sbjct: 610 TLTNWTLEFERWAPAVKTLILKGSP----TVRRELYPRIRAGD---------FQVCLTTY 656
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ ++ ++ L++I W + IIDE RLKN S L L E++ RL++TGTP+QNNL E
Sbjct: 657 EYIIKERPLLAKIKWVHMIIDEGHRLKNIKSKLSQTLNEYYSTRHRLILTGTPLQNNLPE 716
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSAFMLR 271
LWAL++F +P +F ++ F F ++ ++ ++ E+ L +L F+LR
Sbjct: 717 LWALLNFVLPKIFNSVKSFDEWFNAPFANTGGQEKMEMNEEEALLVVKRLHKVLRPFLLR 776
Query: 272 RTKQKLVECGHLMLPP------LTEITVLQKKVYASILR-KELPKLLALSS--RTANHQ- 321
R K K VE LP T+++ LQ K+Y S+ + K LP L+ R AN Q
Sbjct: 777 RLK-KDVES---ELPDKVEKVIYTKMSALQWKLYESVKKYKTLPTDLSSGKPRRQANLQN 832
Query: 322 ----------------------SLQNT-------ASGKLVVLDLLLKKLYNSGHRVLLFA 352
S+ NT SGK +LD LL KL+ +GH+VL+F
Sbjct: 833 AIMQLRKICNHPFVFREVDEDFSVGNTVDEQIVRTSGKFELLDRLLPKLFATGHKVLIFF 892
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QMT+ + I+ D+ + R + Y RLDGS +AEER + F+ + + VF
Sbjct: 893 QMTEIMSIIADYFDYRGWKYCRLDGSTKAEERQQLLSTFNDPDSPYQ-----------VF 941
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++STRAGG+GLNL +ADTVI Y+ DWNP D QA RAHRIGQ V + L++ TVEE
Sbjct: 942 ILSTRAGGLGLNLQSADTVIIYDTDWNPHADLQAQDRAHRIGQKKEVRVLRLISSGTVEE 1001
Query: 473 VIMRRAERKLRLSHNVV 489
++++RA+ KL + V+
Sbjct: 1002 LVLQRAQAKLEIDGKVI 1018
>gi|359477501|ref|XP_002281240.2| PREDICTED: transcription regulatory protein SNF2-like [Vitis
vinifera]
Length = 1114
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 271/488 (55%), Gaps = 59/488 (12%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+P+Q+EGL W++ + +N +L DEMGLGKT+Q IS ++YL ++ GP L++ P
Sbjct: 409 GELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLVENKGVTGPHLIVAP 468
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
+V WV+E + + P + + Y G ++R+ +R + K F+VL+T
Sbjct: 469 KAVLPNWVNEFSTWAPSIAAVLYDGRLDERKALREEISGEGK------------FNVLIT 516
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
YD+++ D+ FL +I W Y I+DE RLKN L L + + RRLL+TGTPIQN+L
Sbjct: 517 HYDLIMRDKAFLKKIDWHYMIVDEGHRLKNHECALARTLVSGYQIQRRLLLTGTPIQNSL 576
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT--SLKGILSAFMLRR 272
ELW+L++F +PS+F ++ F F S +E L ++ F+LRR
Sbjct: 577 QELWSLLNFLLPSIFNSVTNFEEWFNAPFADRSDVSLTDEEELLIIHRLHHVIRPFILRR 636
Query: 273 TKQKLVEC--GHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRTANHQSLQN----- 325
K ++ + G + +++ QK Y + +L + + L + + +SLQN
Sbjct: 637 KKDEVEKYLPGKTQVILKCDMSAWQKAYYHQV--TDLGR-VGLDTGSGKSKSLQNLSMQL 693
Query: 326 ------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
ASGK +LD LL KL +GHRVLLF+QMT+ +DIL
Sbjct: 694 RKCCNHPYLFVGDYNIWQKKEEMVRASGKFELLDRLLPKLQKAGHRVLLFSQMTRLMDIL 753
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+ +L++ + Y RLDGS + EER ++ F+ A + F+F++STRAGG+
Sbjct: 754 EIYLQMNEIKYLRLDGSTKTEERGTKLKQFN-----------APDSPYFMFLLSTRAGGL 802
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ V LV+ ++EEVI+ RA++K
Sbjct: 803 GLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQK 862
Query: 482 LRLSHNVV 489
+ + V+
Sbjct: 863 MGIDAKVI 870
>gi|345559941|gb|EGX43071.1| hypothetical protein AOL_s00215g680 [Arthrobotrys oligospora ATCC
24927]
Length = 1478
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 183/534 (34%), Positives = 282/534 (52%), Gaps = 90/534 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +LK +Q++GL W++ + +N +L DEMGLGKT+Q IS +++L + GPFLV+
Sbjct: 582 VGGKLKDYQLKGLQWMVSLFNNNLNGILADEMGLGKTIQTISLVTHLIEKKNVTGPFLVI 641
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P ++ + Y G R+ + + V F +
Sbjct: 642 VPLSTLTNWTLEFEKWAPSIKKIVYKGPPLARK-------------AHQAQVRSGDFQAV 688
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS+I W Y I+DE R+KN S L L +++ RL++TGTP+QN
Sbjct: 689 LTTYEYIIKDRPVLSKIKWAYMIVDEGHRMKNSESKLSFTLTTYYICRYRLILTGTPLQN 748
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELWAL++F +P++F ++ F F ++ + ++ E+ L +L
Sbjct: 749 NLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDKMELTEEEALLIIRRLHKVLRP 808
Query: 268 FMLRRTK-----------QKLVECGHLMLPPLTEITVLQKKVYASILR------------ 304
F+LRR K +K+V+C + + LQ K+Y + +
Sbjct: 809 FLLRRLKKDVEAELPDKVEKVVKC---------KFSALQAKLYNQMKQSGAIFVASENQK 859
Query: 305 ------KELPKLLALSSRTANH----QSLQNTAS-------------GKLVVLDLLLKKL 341
K L +L + NH + ++N S GK +LD LL K
Sbjct: 860 SGRVSIKGLSNMLMQLRKICNHPFVFEDVENAISPGPLANDLLWRTAGKFELLDRLLPKF 919
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+ +GHR+L+F QMTQ ++I++DFL R + + RLDGS +A++R ++ F+
Sbjct: 920 FAAGHRILMFFQMTQIMNIMEDFLNFRGWKFMRLDGSTKADDRSVMLKDFN--------- 970
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
A G+D +F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 971 --APGSDYLIFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 1028
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVK--ERTAVETDDLRSII 513
+ L+T ++VEE I+ RA+ KL + V+ D + K ER A+ LRS++
Sbjct: 1029 LRLITSNSVEEKILSRAQYKLDIDGKVIQAGKFDNKSKDEERDAL----LRSLL 1078
>gi|365990922|ref|XP_003672290.1| hypothetical protein NDAI_0J01550 [Naumovozyma dairenensis CBS 421]
gi|343771065|emb|CCD27047.1| hypothetical protein NDAI_0J01550 [Naumovozyma dairenensis CBS 421]
Length = 1520
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 189/528 (35%), Positives = 284/528 (53%), Gaps = 76/528 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++F+S+L F++ GP L++ P
Sbjct: 399 GELRDFQLTGVNWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLVFARRQNGPHLIVVP 458
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W K+ P L V+ Y+G +E R IR + E ++ F+VLLT
Sbjct: 459 LSTMPAWQETFEKWAPALNVIYYMGNQESRDTIRDYEFYTNPEAKGKKHIK---FNVLLT 515
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L I W + +DEA RLKN S LY L F + RLL+TGTP+QNN+
Sbjct: 516 TYEYILKDRSLLGGIKWQFLAVDEAHRLKNAESSLYESLNS-FKVSNRLLITGTPLQNNI 574
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL++F MP F ++Q + K +E L+ L ++LRR K
Sbjct: 575 KELAALVNFLMPDRF-MIDQEIDFEKQDEEQ---------EEYIRDLQKRLQPYILRRLK 624
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP T E++ LQ + Y +IL K L A S
Sbjct: 625 KDVEKS----LPSKTERILRVELSDLQTEYYKNILTKNYSALTAGSKGGRFSLLNVMNEL 680
Query: 315 SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L + A SGK+V+LD LL +L GHRVL
Sbjct: 681 KKASNHPYLFDNAEERVLEKFGAGNSSRENVLRGLLMSSGKMVLLDKLLTRLKKDGHRVL 740
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + +
Sbjct: 741 IFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRTSIDHFNAPDSTDD---------- 790
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
VF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++ T
Sbjct: 791 -VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDT 849
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD-REVKERTAVETDDLRSII-FG 515
VEE ++ RA +K+ L + ++ V D ++ K+ T +L I+ FG
Sbjct: 850 VEEEVLERARKKMILEYAIISLGVTDGKKRKQATEPNAGELSEILKFG 897
>gi|209877571|ref|XP_002140227.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
muris RN66]
gi|209555833|gb|EEA05878.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
muris RN66]
Length = 1100
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 186/496 (37%), Positives = 273/496 (55%), Gaps = 65/496 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LKP+Q+EGL+WLI Y G+N +L DEMGLGKT Q IS L+YLK + G L+L P
Sbjct: 168 GQLKPYQLEGLNWLIYLYESGLNGILADEMGLGKTFQTISLLAYLKEYRNIDGVHLILSP 227
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E+ +F P ++ L++ G E+R + R + + ++V++T
Sbjct: 228 KSTLGNWINEINRFCPCIKTLKFHGNSEERNILMRKILTNEDNNK--------DYNVIVT 279
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ L ++ + + + IIDEA R+KN SS L ++R + RLL+TGTP+QN+L
Sbjct: 280 SYEMCLREKSWFMKKRFHSVIIDEAHRIKNESSKLSQIVR-NLETKFRLLITGTPLQNSL 338
Query: 215 SELWALMHFCMPSVFGTLNQF-----LSTFKDAVHS-SSAPKRGKIKEQFTSLKGILSAF 268
ELW+L++F P +F + ++F L + D S K K E L IL F
Sbjct: 339 KELWSLLNFLFPEIFSSSDEFETLFDLQSINDNFSDLSQEQKEKKSFEIIERLHKILRPF 398
Query: 269 MLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKL------------ 310
MLRR K ++ + +PP EI T +Q+ +Y IL K + L
Sbjct: 399 MLRRIKSEV----EIDIPPKKEILLYVPLTNMQRTLYRDILSKNIDALQERDSGGRVRLI 454
Query: 311 -LALSSRTA-NHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
LA+ R A NH L + SGK+++LD L KKL +G R+L+F+Q
Sbjct: 455 NLAMQLRKACNHPYLFDGYEDKNEDPFGEHVIENSGKMIMLDRLTKKLLQNGSRILIFSQ 514
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M + LDIL+DF +RKY Y R+DG+ E+R I F+ ++ D +F+
Sbjct: 515 MARILDILEDFCYMRKYKYCRIDGNTSTEDRDTQISDFNKPNS-----------DISIFL 563
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L E+T+EE
Sbjct: 564 LSTRAGGLGVNLATADIVIIYDSDWNPQVDLQAMDRAHRIGQKKPVYIYRLFHENTIEEK 623
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA KL+L ++
Sbjct: 624 ILERANLKLQLESAII 639
>gi|67478494|ref|XP_654639.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56471706|gb|EAL49253.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708079|gb|EMD47606.1| chromodomain helicase DNA binding protein, putative [Entamoeba
histolytica KU27]
Length = 1262
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 185/490 (37%), Positives = 274/490 (55%), Gaps = 68/490 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+ +Q+EG++W+ + NV+L DEMGLGKT+Q I+F+ +L + GPFLV+
Sbjct: 365 VKNKLRDYQIEGVNWITYAFSQNTNVILADEMGLGKTVQTITFIRHLYDNYNIIGPFLVI 424
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRT-MYEHVKEQSQMSNVSPLPFDV 151
PLS W E K+ PKL + Y G+ E R IR+T M+ + K + F+V
Sbjct: 425 VPLSTISNWSKEFNKWAPKLNCVVYTGDGESRAIIRKTEMFGNKK--------GTIKFNV 476
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
LLT++++V+ DQ +Q W YT++DEA RLKN LY VL +LL+TGTP+Q
Sbjct: 477 LLTSFELVIKDQDVFNQFHWKYTVVDEAHRLKNNEGQLYEVLM-RTTTENKLLITGTPLQ 535
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
N L ELW+L+HF P F + +F T+ +V + E+ + L ++LR
Sbjct: 536 NTLKELWSLLHFLHPKKFISFEEFEKTY--SVEGT---------EEINKIHNELKPYLLR 584
Query: 272 RTKQKLVECGHLMLPP------LTEITVLQKKVYASILRK-------------------- 305
R K+ + + LPP E++ +QK+ Y I+ K
Sbjct: 585 RMKKDVEKS----LPPKKERILRVELSPIQKQYYRWIITKNSDALKKAVQQQKTSLMNIC 640
Query: 306 -ELPKLLA---LSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
EL KL L + N ++ +N + GK+++LD LL KL +GHRVL+F+QM + LD
Sbjct: 641 MELKKLCNHPILINELMNSENEENLIQSCGKMILLDKLLVKLKETGHRVLIFSQMVRMLD 700
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
+L ++L R ++Y+RLDG++ E R A+ HF+ + + + FVF++STRAG
Sbjct: 701 VLSNYLHFRGFNYQRLDGAMGREARQRAMDHFNAKDSTD-----------FVFLLSTRAG 749
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL ADTVI Y+ DWNPQ D QA R HRIGQ V L TE T+EE I+ A+
Sbjct: 750 GLGINLTTADTVIIYDSDWNPQNDLQAQARCHRIGQEKTVNIYRLATEGTIEEKILLSAK 809
Query: 480 RKLRLSHNVV 489
+KL L H ++
Sbjct: 810 KKLVLDHLII 819
>gi|212542839|ref|XP_002151574.1| chromodomain helicase (Chd1), putative [Talaromyces marneffei ATCC
18224]
gi|210066481|gb|EEA20574.1| chromodomain helicase (Chd1), putative [Talaromyces marneffei ATCC
18224]
Length = 1497
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 190/510 (37%), Positives = 273/510 (53%), Gaps = 77/510 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +LK QV+GL++L + NV+L DEMGLGKT+Q I+F+++L+ + GPF+
Sbjct: 438 FLQNGQLKDFQVKGLNFLAYNWSRNQNVVLADEMGLGKTVQTIAFINWLRHVRGQDGPFI 497
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W +TP + + Y G + R+ ++ YE +K+ N F+
Sbjct: 498 VVVPLSTIPSWSETFEYWTPDVNYIVYTGSSQARQILKD--YELMKD----GNPRKPKFN 551
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
V+LTT++ MD FL Q PW + +DEA RLKN S LY L + F P RLL+TGTPI
Sbjct: 552 VMLTTFEYANMDFDFLRQFPWQFMAVDEAHRLKNRESNLYGNLLD-FKAPARLLITGTPI 610
Query: 211 QNNLSELWALMHFCMPSVFGT-LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
QNNL+EL ALM F P + ++ LS+ + E+ L+ L M
Sbjct: 611 QNNLAELSALMDFLNPGLVEVEVDMDLSS-------------EQASEKLAKLQNTLKPLM 657
Query: 270 LRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKEL---------------- 307
LRRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 658 LRRTKSK-VETD---LPPKTEKIIRVELSDIQLEYYKNILTKNYAALNEGANGQKQSLLN 713
Query: 308 -------------------PKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRV 348
KLL ++R + + T+SGK+++LD LL KL GHRV
Sbjct: 714 IMMELKKASNHPFMFPNAEAKLLEGNTRREDLLRIMITSSGKMMLLDQLLAKLKRDGHRV 773
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LD+L D++ R Y Y+RLDG+I A R A+ HF+ + +
Sbjct: 774 LIFSQMVKMLDLLGDYMRFRGYQYQRLDGTISAANRRVAMEHFNAPESSD---------- 823
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 824 -FAFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSKD 882
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVDREV 498
T+EE ++ RA KL L + + +++V
Sbjct: 883 TIEEEVLERARNKLMLEFITIQRGLTEKDV 912
>gi|326426853|gb|EGD72423.1| transcription activator [Salpingoeca sp. ATCC 50818]
Length = 1106
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 198/521 (38%), Positives = 284/521 (54%), Gaps = 74/521 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +Q+ GL+WLI + V +L DEMGLGKTLQ IS L YLK + GPFL+L P
Sbjct: 233 GKMRDYQLRGLNWLIGLHANSVGGILADEMGLGKTLQTISLLGYLKNFRRMDGPFLLLVP 292
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W+ E+AK+ P L+ + G +E+R I ++EQ + P +D ++T
Sbjct: 293 KSTLKNWMRELAKWCPTLKAVCLTGSKEERPKI-------IEEQ-----IMPGQWDCVVT 340
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ ++++ L + W Y +IDEA R+KN S L + RE RLL+TGTP+QNNL
Sbjct: 341 SYEICVIEKSALKKFVWEYIVIDEAHRIKNEKSKLSLIARE-IESRNRLLITGTPLQNNL 399
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P +F + +F F H+ + + + + L +L F+LRR K
Sbjct: 400 HELWALLNFLLPDIFQSSEEFDKYF----HAENLQQESMVHK----LHSVLKPFLLRRLK 451
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+++ + LPP EI V +Q+ Y +IL K+ L +L
Sbjct: 452 KEVEKS----LPPKKEIKVYVGMSKMQRDWYKNILMKDIDTINGAGRVEKMRLLNILMQL 507
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGKLVVLD LL KL G RVL+F+QMT+ LD
Sbjct: 508 RKCCNHPYLFDGAEPGPPFTTDQHLVDNSGKLVVLDKLLTKLKAQGSRVLIFSQMTRMLD 567
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R + Y RLDGS E R I F+ ++ D F+F++STRAG
Sbjct: 568 ILEDYSWWRGHKYCRLDGSTAHEIRGEMIDDFNRPNS-----------DKFMFLLSTRAG 616
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ D+NPQ+D QA RAHRIGQ V +TE TVEE I+ RAE
Sbjct: 617 GLGINLYTADVVIIYDSDFNPQMDLQAQDRAHRIGQTKEVRVFRFITEKTVEERIVERAE 676
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGL-HLF 519
KLRL V+ + + K+ ++ D L I FG H+F
Sbjct: 677 MKLRLDAVVIQQGRLSDKQKQLSS--GDMLNMIQFGADHIF 715
>gi|449466193|ref|XP_004150811.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
[Cucumis sativus]
Length = 1073
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 192/520 (36%), Positives = 289/520 (55%), Gaps = 73/520 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 194 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEYRGITGPHMVV 253
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G ++RR+IR + K FDV
Sbjct: 254 APKSTLGNWMNEIRRFCPVLRAVKFLGNPDERRDIRENLLVAGK------------FDVC 301
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 302 VTSFEMAIKEKSCLRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYNTNYRLLITGTPLQN 360
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 361 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 413
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 414 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQL 469
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L T++GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 470 RKCCNHPYLFQGAEPGPPYTTGDHLITSAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 529
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 530 ILEDYLMFRGYYYCRIDGNTGGEDRDASIDAFN-----------KPGSEKFVFLLSTRAG 578
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 579 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 638
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL 518
+KL L V+ + E+ V D+L ++ FG +
Sbjct: 639 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEM 674
>gi|407037695|gb|EKE38751.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
nuttalli P19]
Length = 1627
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 192/524 (36%), Positives = 290/524 (55%), Gaps = 80/524 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EGL+WL+ + G +L DEMGLGKT+Q ++F +L+ Q PGPFLV+ PLS
Sbjct: 649 LRSYQMEGLNWLVFNWCRGKGCILADEMGLGKTVQVVAFFEHLRSFQKLPGPFLVVTPLS 708
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV-KEQSQMSNVSPLPFDVLLTT 155
+ W E+ ++T + V+ Y+G +E R+ I+ + ++ K++ ++S + F L+TT
Sbjct: 709 TLEHWRREINEWT-DMNVVVYLGTKENRQLIQHYEWFYLNKDEKEIS--KQIKFHALITT 765
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP--RRLLMTGTPIQNN 213
Y++++ D LSQI W T++DEAQRLKN SS L L E +P ++L+TGTPIQNN
Sbjct: 766 YEMIMSDYEILSQIHWQVTVVDEAQRLKNKSSKLNKTLTE---IPSYHKILLTGTPIQNN 822
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ ELW L++F P F +L F F DA K + +L+ + ++LRR
Sbjct: 823 IDELWTLLNFINPENFPSLENFHEKFGDA----------KTADGVKALQTEIQPYLLRRV 872
Query: 274 KQKLVECGHLMLPPLTEI------TVLQKKVYASILRKE---------------LPKLLA 312
K + + +PP EI T++QKK Y ++ K L L+
Sbjct: 873 KGNVEKS----IPPKEEILIEVELTLVQKKYYRALYDKNREFLNKGCVGSNVPHLQNLMI 928
Query: 313 LSSRTANH---------QSLQNT------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
+ NH + + N +SGK+V+LD LL KL GH+VL+F
Sbjct: 929 QLRKVCNHPFLIPGVEEKEIANPDDPESFAQELIKSSGKMVLLDKLLPKLNADGHKVLIF 988
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+Q+ LDIL+ +L +KY+YERLDGS+R+ +R Q+AI+R + FV
Sbjct: 989 SQLKGVLDILEKYLSYKKYTYERLDGSVRSNDR---------QNAIDRFMK----GERFV 1035
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++ TRAGG+G+NL ADTVI Y+ DWNPQ D QA R HRIGQ V LV+++T E
Sbjct: 1036 FLLCTRAGGIGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVKVYRLVSKNTYE 1095
Query: 472 EVIMRRAERKLRLSHNVVGD-DVVDREV-KERTAVETDDLRSII 513
+ RA KL L ++ + + EV KE + +D+ S++
Sbjct: 1096 RYMFERASMKLGLDQAILSNINNTPGEVNKESEKLSKEDITSLL 1139
>gi|159465629|ref|XP_001691025.1| SNF2 superfamily protein [Chlamydomonas reinhardtii]
gi|158279711|gb|EDP05471.1| SNF2 superfamily protein [Chlamydomonas reinhardtii]
Length = 1061
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/516 (36%), Positives = 282/516 (54%), Gaps = 69/516 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+W+I Y G+N +L DEMGLGKTLQ IS ++YL + GP +V+ P S
Sbjct: 175 LREYQMQGLNWMIHLYDNGINGILADEMGLGKTLQTISLVAYLYEYRGITGPHIVITPKS 234
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
WV+E +F P + V ++ G ++R + T +P FDV++T+Y
Sbjct: 235 TLGNWVNEFKRFAPIIRVTKFHGNADERMIQKET------------TCAPGRFDVVVTSY 282
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y IIDEA R+KN +S L V+R+ RLL+TGTP+QNNL E
Sbjct: 283 EMVIKEKNHFKRFHWRYIIIDEAHRIKNENSRLSLVVRQ-LKTNYRLLITGTPLQNNLHE 341
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P +F + +F F ++ S K ++ +Q L +L F+LRR K
Sbjct: 342 LWALLNFLLPEIFSSAEKFEEWF--SLGDGSKEKEAEVVQQ---LHKVLRPFLLRRVKSD 396
Query: 277 LVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRT------------A 318
VE G LPP E ++ +QKK YA++L+K++ L + R
Sbjct: 397 -VERG---LPPKKETILKIGMSEMQKKWYAALLQKDVDALNGGADRAKLLNVVMQLRKCC 452
Query: 319 NHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQD 363
NH L A SGKLV+LD LL +L RVL+F+QMT+ +DIL+D
Sbjct: 453 NHPYLFQGAEPGPPFITGEHLVENSGKLVLLDKLLPRLKERESRVLIFSQMTRMIDILED 512
Query: 364 FLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGL 423
+ R Y Y R+DG+ E R I F+ ++ F+F++STRAGG+G+
Sbjct: 513 YCLYRGYGYCRIDGNTDGEARDNMIDEFNRPNS-----------SKFIFLLSTRAGGLGI 561
Query: 424 NLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLR 483
NL AD V+ Y+ DWNPQ+D QA+ RAHRIGQ V E+++EE ++ +A +KLR
Sbjct: 562 NLATADIVVLYDSDWNPQMDLQAMDRAHRIGQKKEVQVFRFCIENSIEEKVIEKAYKKLR 621
Query: 484 LSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL 518
L V+ + T V DDL +++ +G L
Sbjct: 622 LDALVIQQGRLTE--NSATKVNKDDLINMVRYGAEL 655
>gi|389742232|gb|EIM83419.1| hypothetical protein STEHIDRAFT_63110 [Stereum hirsutum FP-91666
SS1]
Length = 1374
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 176/502 (35%), Positives = 270/502 (53%), Gaps = 73/502 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS +++L ++ GPFLV+
Sbjct: 497 VGGTLKEYQIKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLITFLLETKRLRGPFLVI 556
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E AK+ P ++V+ Y G QRR ++ ++ F VL
Sbjct: 557 VPLSTMTNWSGEFAKWAPSVKVVAYKGNPAQRRALQ-------------GDLRVGQFQVL 603
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS++ W + IIDE R+KN S L L ++ P RL++TGTP+QN
Sbjct: 604 LTTYEYIIKDRPVLSKMKWQHMIIDEGHRMKNTRSKLALTLTTYYHSPYRLILTGTPLQN 663
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELWAL++F +P +F ++ F F +S P + ++ E+ L +L
Sbjct: 664 NLPELWALLNFALPKIFNSVKSFDEWFNTPFANSGTPDKIELNEEEALLIIRRLHKVLRP 723
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASI------------------- 302
F+LRR K+ + LP E ++ LQ ++Y +
Sbjct: 724 FLLRRLKKDV----ERELPDKVEKVVKVRMSALQSQLYKQMKKYKMIASGLDNKQGYGGV 779
Query: 303 --LRKELPKLLALSSRTANHQSLQNT-------------ASGKLVVLDLLLKKLYNSGHR 347
L EL +L + +S+++ +SGK+ +L+ +L K ++ GHR
Sbjct: 780 KGLSNELMQLRKICQHPFLFESVEDKLNPSGLIDDKLIRSSGKIELLNRILPKFFDQGHR 839
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F QMT+ +DI++DFL+++ + Y RLDG + EER A + F+ + +
Sbjct: 840 VLIFFQMTRVMDIMEDFLKMQNWKYLRLDGGTKTEERAAHVTAFNTKDS----------- 888
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
+ VF++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ V + +TE
Sbjct: 889 EIMVFILSTRAGGLGLNLQTADTVIIFDSDWNPHADLQAQDRAHRIGQTKAVRILRFITE 948
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
+VEE + RA KL + V+
Sbjct: 949 KSVEEAMYSRARYKLDIDDKVI 970
>gi|341900249|gb|EGT56184.1| hypothetical protein CAEBREN_32223 [Caenorhabditis brenneri]
Length = 1816
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 193/532 (36%), Positives = 277/532 (52%), Gaps = 75/532 (14%)
Query: 25 PVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQM 84
P +E G T L P+Q+EG++WL + G + +L DEMGLGKT+Q+++FL L
Sbjct: 609 PDYVSETGGT--LHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGH 666
Query: 85 SPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVK-------E 137
GPFL+ PLS W E ++ P V+ YVG+R+ R +R + V+ +
Sbjct: 667 CKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGDRDSRVVLREHEFSFVEGAVRSGPK 726
Query: 138 QSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHF 197
+M + F VLLT+Y+ + MD+ LS I W ++DEA RLKN S+ + L E +
Sbjct: 727 AGKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNE-Y 785
Query: 198 LMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ 257
+ R+L+TGTP+QNNL EL+ L++F F L F + F + ++Q
Sbjct: 786 TIHYRVLLTGTPLQNNLEELFHLLNFLSAERFNQLEAFTAEFSEISK----------EDQ 835
Query: 258 FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKL- 310
L +L MLRR K ++ +P +E+ V +QKK Y +IL + L
Sbjct: 836 IEKLHNLLGPHMLRRLKADVL----TGMPSKSELIVRVELSPMQKKWYKNILTRNFDALN 891
Query: 311 -------------LALSSRTANHQSLQNTAS--------------------GKLVVLDLL 337
L + NH L AS GK V+L +
Sbjct: 892 VKNGGTQMSLMNVLMELKKCCNHPYLFAKASLEAPKEKNGMYEGTALIKNAGKFVLLQKM 951
Query: 338 LKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAI 397
L+KL GHRVL+F+QMT LDI++DF ++ Y YER+DGSI + R Q AI
Sbjct: 952 LRKLKEQGHRVLIFSQMTMMLDIMEDFCDVEGYKYERIDGSITGQMR---------QDAI 1002
Query: 398 ERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMN 457
+R A G FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHR+GQ +
Sbjct: 1003 DRY--NAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKH 1060
Query: 458 HVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDL 509
V+ VT+ +VEE I A++K+ L+H VV + +E K + E DD+
Sbjct: 1061 KVMIYRFVTKGSVEERITSVAKKKMLLNHLVVRAGLGGKEGKSMSKSELDDV 1112
>gi|225432366|ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling complex ATPase chain
isoform 1 [Vitis vinifera]
gi|297736902|emb|CBI26103.3| unnamed protein product [Vitis vinifera]
Length = 1080
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 201/547 (36%), Positives = 299/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 200 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 259
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G ++RR+IR + K FDV
Sbjct: 260 APKSTLGNWMNEIRRFCPVLRAVKFLGNPDERRHIRDNLLVAGK------------FDVC 307
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 308 VTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYSTNYRLLITGTPLQN 366
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 367 NLHELWSLLNFLLPEIFNSAETFDEWFQISGDNDQ-------QEVVQQLHKVLRPFLLRR 419
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ LQK+ Y ++L+K+L +LL ++
Sbjct: 420 LKSD-VEKG---LPPKKETILKVGMSQLQKQFYRALLQKDLEVVNAGGERKRLLNIAMQL 475
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L T SGK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 476 RKCCNHPYLFQGAEPGPPYTTGEHLITNSGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 535
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 536 ILEDYLMFRGYLYCRIDGNTGGEDRDASIDAFN-----------KPGSEKFVFLLSTRAG 584
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 585 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 644
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ FG + F K I +E+ D +
Sbjct: 645 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 700
Query: 536 GLNSMVE 542
G + E
Sbjct: 701 GEEATAE 707
>gi|359477431|ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling complex ATPase chain
isoform 2 [Vitis vinifera]
Length = 1068
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 201/547 (36%), Positives = 299/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 188 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 247
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G ++RR+IR + K FDV
Sbjct: 248 APKSTLGNWMNEIRRFCPVLRAVKFLGNPDERRHIRDNLLVAGK------------FDVC 295
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 296 VTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYSTNYRLLITGTPLQN 354
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 355 NLHELWSLLNFLLPEIFNSAETFDEWFQISGDNDQ-------QEVVQQLHKVLRPFLLRR 407
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ LQK+ Y ++L+K+L +LL ++
Sbjct: 408 LKSD-VEKG---LPPKKETILKVGMSQLQKQFYRALLQKDLEVVNAGGERKRLLNIAMQL 463
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L T SGK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 464 RKCCNHPYLFQGAEPGPPYTTGEHLITNSGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 523
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 524 ILEDYLMFRGYLYCRIDGNTGGEDRDASIDAFN-----------KPGSEKFVFLLSTRAG 572
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 573 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 632
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ FG + F K I +E+ D +
Sbjct: 633 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 688
Query: 536 GLNSMVE 542
G + E
Sbjct: 689 GEEATAE 695
>gi|194751939|ref|XP_001958281.1| GF10842 [Drosophila ananassae]
gi|190625563|gb|EDV41087.1| GF10842 [Drosophila ananassae]
Length = 1971
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 261/503 (51%), Gaps = 71/503 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G +L P+Q+EG++WL + G++ +L DEMGLGKT+Q ++FL L GPFLV
Sbjct: 710 GTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLV 769
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL---- 147
PLS W E + P + Y+G+++ R IR + + S VS L
Sbjct: 770 AVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQ 829
Query: 148 -PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
F+VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+T
Sbjct: 830 YKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YAIAYKLLLT 888
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL EL+ L++F F L F F D +EQ L +L
Sbjct: 889 GTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLG 938
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----- 315
MLRR K +++ +P +E V +QKK Y IL K L + S
Sbjct: 939 PHMLRRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCS 994
Query: 316 ---------RTANHQSL--------------------QNTASGKLVVLDLLLKKLYNSGH 346
+ NH L A+GKLV+L +LK+L + H
Sbjct: 995 LINIMMDLKKCCNHPYLFPSAAEEAPTSAGGLYEINSLTKAAGKLVLLSKMLKQLKSQNH 1054
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QMT+ LDIL+DFLE +Y YER+DG I R AI F+ A G
Sbjct: 1055 RVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTVRQEAIDRFN-----------APG 1103
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 1104 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1163
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
++VEE + + A+RK+ L+H VV
Sbjct: 1164 RNSVEERVTQVAKRKMMLTHLVV 1186
>gi|195496103|ref|XP_002095551.1| GE22457 [Drosophila yakuba]
gi|194181652|gb|EDW95263.1| GE22457 [Drosophila yakuba]
Length = 1982
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 261/503 (51%), Gaps = 71/503 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G +L P+Q+EG++WL + G++ +L DEMGLGKT+Q ++FL L GPFLV
Sbjct: 725 GTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLV 784
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL---- 147
PLS W E + P + Y+G+++ R IR + + S VS L
Sbjct: 785 AVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQ 844
Query: 148 -PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
F+VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+T
Sbjct: 845 YKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YTIAYKLLLT 903
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL EL+ L++F F L F F D +EQ L +L
Sbjct: 904 GTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLG 953
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----- 315
MLRR K +++ +P +E V +QKK Y IL K L + S
Sbjct: 954 PHMLRRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCS 1009
Query: 316 ---------RTANHQSL--------------------QNTASGKLVVLDLLLKKLYNSGH 346
+ NH L A+GKLV+L +LK+L + H
Sbjct: 1010 LINIMMDLKKCCNHPYLFPSAAEEATTSAGGLYEINSLTKAAGKLVLLSKMLKQLKSQNH 1069
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QMT+ LDIL+DFLE +Y YER+DG I R AI F+ A G
Sbjct: 1070 RVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFN-----------APG 1118
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 1119 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1178
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
++VEE + + A+RK+ L+H VV
Sbjct: 1179 RNSVEERVTQVAKRKMMLTHLVV 1201
>gi|67474889|ref|XP_653178.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470108|gb|EAL47792.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449706113|gb|EMD46028.1| chromodomain helicase DNA binding protein, putative [Entamoeba
histolytica KU27]
Length = 1641
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 192/524 (36%), Positives = 290/524 (55%), Gaps = 80/524 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EGL+WL+ + G +L DEMGLGKT+Q ++F +L+ Q PGPFLV+ PLS
Sbjct: 649 LRSYQMEGLNWLVFNWCRGKGCILADEMGLGKTVQVVAFFEHLRSFQKLPGPFLVVTPLS 708
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV-KEQSQMSNVSPLPFDVLLTT 155
+ W E+ ++T + V+ Y+G +E R+ I+ + ++ K++ ++S + F L+TT
Sbjct: 709 TLEHWRREINEWT-DMNVVVYLGTKENRQLIQHYEWFYLNKDEKEIS--KQIKFHALITT 765
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP--RRLLMTGTPIQNN 213
Y++++ D LSQI W T++DEAQRLKN SS L L E +P ++L+TGTPIQNN
Sbjct: 766 YEMIMSDYEILSQIHWQVTVVDEAQRLKNKSSKLNKTLTE---IPSYHKILLTGTPIQNN 822
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ ELW L++F P F +L F F DA K + +L+ + ++LRR
Sbjct: 823 IDELWTLLNFINPENFPSLENFHEKFGDA----------KTADGVKALQTEIQPYLLRRV 872
Query: 274 KQKLVECGHLMLPPLTEI------TVLQKKVYASILRK---------------ELPKLLA 312
K + + +PP EI T++QKK Y ++ K L L+
Sbjct: 873 KGNVEKS----IPPKEEILIEVELTLVQKKYYRALYDKNREFLNKGCVGSNVPHLQNLMI 928
Query: 313 LSSRTANH---------QSLQNT------------ASGKLVVLDLLLKKLYNSGHRVLLF 351
+ NH + + N +SGK+V+LD LL KL GH+VL+F
Sbjct: 929 QLRKVCNHPFLIPGVEEKEIANPDDPESYAQELIKSSGKMVLLDKLLPKLNADGHKVLIF 988
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+Q+ LDIL+ +L +KY+YERLDGS+R+ +R Q+AI+R + FV
Sbjct: 989 SQLKGVLDILEKYLSYKKYTYERLDGSVRSNDR---------QNAIDRFMK----GERFV 1035
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++ TRAGG+G+NL ADTVI Y+ DWNPQ D QA R HRIGQ V LV+++T E
Sbjct: 1036 FLLCTRAGGIGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVKVYRLVSKNTYE 1095
Query: 472 EVIMRRAERKLRLSHNVVGD-DVVDREV-KERTAVETDDLRSII 513
+ RA KL L ++ + + EV KE + +D+ S++
Sbjct: 1096 RYMFERASMKLGLDQAILSNINNTPGEVNKESEKLSKEDITSLL 1139
>gi|291240565|ref|XP_002740192.1| PREDICTED: Chromodomain-helicase-DNA-binding protein 1-like
[Saccoglossus kowalevskii]
Length = 938
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/452 (39%), Positives = 256/452 (56%), Gaps = 59/452 (13%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q++GL+WL+ + V+L DEMGLGKT+QAI+FLSYL + GPFL++ PL
Sbjct: 516 ELRDYQLDGLNWLLHSWCKENGVILADEMGLGKTIQAIAFLSYLFNTYQLYGPFLLVVPL 575
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P L V+ Y+G+ R IR E N S L F+ L+TT
Sbjct: 576 STMTAWQREFEIWAPDLNVVVYIGDLVSRNKIREY------EWCFAGNRSRLRFNALITT 629
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL+ + W I+DEA RLKN S+LY L + F RLL+TGTP+QN+L
Sbjct: 630 YEILLKDKSFLNSVNWSNLIVDEAHRLKNDDSLLYKTLMD-FHTHHRLLITGTPLQNSLK 688
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELW+L+HF MP F + QF + H A + G +TSL +L F+LRR K+
Sbjct: 689 ELWSLLHFIMPVKFDSWEQF-----EKEH--MADQNG-----YTSLHKVLEPFLLRRVKK 736
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKL--------------LALSSRTAN 319
+ + + + E++ QK+ Y IL K L + + N
Sbjct: 737 DVEKSLPAKVEQILRVEMSAKQKQYYKWILTKNYKALSKGLKGNLSGFLNIMMELKKLCN 796
Query: 320 H-----------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLE 366
H L+N SGK+ +LD LL +L+ +GHRVL+F+QM + LDIL D+L
Sbjct: 797 HPYLIRPEDNGITDLENLIRTSGKVHLLDKLLTRLHETGHRVLIFSQMVRMLDILADYLS 856
Query: 367 LRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLV 426
++ + ++RLDGSI +E R A+ HF+ + +++ F F++STRAGG+G+NL
Sbjct: 857 MKHWPFQRLDGSISSEVRKQALDHFNAEGSMD-----------FCFLLSTRAGGLGINLA 905
Query: 427 AADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
ADTVI ++ DWNPQ D QA RAHRIGQ N
Sbjct: 906 TADTVIIFDSDWNPQNDLQAQARAHRIGQRNQ 937
>gi|68144413|gb|AAY86155.1| chromatin-remodelling complex ATPase ISWI2 [Chlamydomonas
reinhardtii]
Length = 1086
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/516 (36%), Positives = 282/516 (54%), Gaps = 69/516 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+W+I Y G+N +L DEMGLGKTLQ IS ++YL + GP +V+ P S
Sbjct: 175 LREYQMQGLNWMIHLYDNGINGILADEMGLGKTLQTISLVAYLYEYRGITGPHIVITPKS 234
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
WV+E +F P + V ++ G ++R + T +P FDV++T+Y
Sbjct: 235 TLGNWVNEFKRFAPIIRVTKFHGNADERMIQKET------------TCAPGRFDVVVTSY 282
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y IIDEA R+KN +S L V+R+ RLL+TGTP+QNNL E
Sbjct: 283 EMVIKEKNHFKRFHWRYIIIDEAHRIKNENSRLSLVVRQ-LKTNYRLLITGTPLQNNLHE 341
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P +F + +F F ++ S K ++ +Q L +L F+LRR K
Sbjct: 342 LWALLNFLLPEIFSSAEKFEEWF--SLGDGSKEKEAEVVQQ---LHKVLRPFLLRRVKSD 396
Query: 277 LVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRT------------A 318
VE G LPP E ++ +QKK YA++L+K++ L + R
Sbjct: 397 -VERG---LPPKKETILKIGMSEMQKKWYAALLQKDVDALNGGADRAKLLNVVMQLRKCC 452
Query: 319 NHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQD 363
NH L A SGKLV+LD LL +L RVL+F+QMT+ +DIL+D
Sbjct: 453 NHPYLFQGAEPGPPFITGEHLVENSGKLVLLDKLLPRLKERESRVLIFSQMTRMIDILED 512
Query: 364 FLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGL 423
+ R Y Y R+DG+ E R I F+ ++ F+F++STRAGG+G+
Sbjct: 513 YCLYRGYGYCRIDGNTDGEARDNMIDEFNRPNS-----------SKFIFLLSTRAGGLGI 561
Query: 424 NLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLR 483
NL AD V+ Y+ DWNPQ+D QA+ RAHRIGQ V E+++EE ++ +A +KLR
Sbjct: 562 NLATADIVVLYDSDWNPQMDLQAMDRAHRIGQKKEVQVFRFCIENSIEEKVIEKAYKKLR 621
Query: 484 LSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL 518
L V+ + T V DDL +++ +G L
Sbjct: 622 LDALVIQQGRLTENSA--TKVNKDDLINMVRYGAEL 655
>gi|422294811|gb|EKU22111.1| swi snf-related matrix-associated actin-dependent regulator of
chromatin a1 isoform a isoform 19, partial
[Nannochloropsis gaditana CCMP526]
Length = 1179
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 198/520 (38%), Positives = 280/520 (53%), Gaps = 95/520 (18%)
Query: 21 DGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLK 80
DG P+ A + A+L HQV+GLSWL+ +Y V +LGD+MGLGKTLQ+I+FL+YLK
Sbjct: 323 DG-VPLVEASRTIQAKLHEHQVQGLSWLVHQYRNAVPAILGDQMGLGKTLQSIAFLAYLK 381
Query: 81 FSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQ 140
+ GP LV+ PLSV W+SE+ +F P + +R+ G +++R I++ V+E
Sbjct: 382 DNLHILGPHLVVVPLSVMSNWMSEIERFCPSMRCIRFHGPKQERARIKQEELTDVRE--- 438
Query: 141 MSNVSPLPFDVLLTTYDVVLMDQG-FLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLM 199
FDV++TTY+++ + F + W I+DE RLKN S L LR+ +
Sbjct: 439 --------FDVVVTTYEMLTSEISYFRRKFFWRVLIVDEGHRLKNEKSQLSENLRK---L 487
Query: 200 PR--RLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ 257
P R+++TGTP QNNL ELWAL H+ +P VF T +SA K +E
Sbjct: 488 PAFYRIILTGTPCQNNLRELWALFHYLLPDVFTT--------------ASAE---KFEEG 530
Query: 258 FTSLKGILSAFMLRRTKQKLVECG--------HLMLPPLTEITVL------QKKVYASIL 303
F + +G++ ++ + L + LPP TE+ V+ Q+ Y +L
Sbjct: 531 FDAQRGVMDVARMKEARALLSLLMLRRRKDQISMTLPPKTELAVVCGLSEYQRTWYKRVL 590
Query: 304 -----------------------RKELPKLLALSSRTANHQSLQNT-----------ASG 329
RK L LL L + NH L + ASG
Sbjct: 591 TGVRNEVLTTGAGGAHEMADPEWRKLLNILLQL-RKVCNHPYLMSDSGYTVGEEMVEASG 649
Query: 330 KLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIR 389
KL VLD +L K+ GHRVLLF+Q T LDIL+++ ++R + Y RLDGS +R +R
Sbjct: 650 KLKVLDRMLPKMKADGHRVLLFSQFTSMLDILEEYCQMRGHEYVRLDGSTNRVQRRLDMR 709
Query: 390 HFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQR 449
F+ A G++ FVF+ISTRAGGVG+NL +ADTV+ Y+ DWNPQVD QA++R
Sbjct: 710 RFN-----------APGSNLFVFLISTRAGGVGINLASADTVVLYDSDWNPQVDLQAMER 758
Query: 450 AHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
AHRIGQ V LV +VEE ++ RA +KL L+ V
Sbjct: 759 AHRIGQTKPVRVYRLVVRASVEERMVSRAHKKLFLNEIVA 798
>gi|356521899|ref|XP_003529588.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
[Glycine max]
Length = 1058
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 299/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 179 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 238
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G ++R++IR + K FDV
Sbjct: 239 APKSTLGNWMNEIRRFCPVLRAIKFLGNPDERKHIREELLVAGK------------FDVC 286
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++V+ ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 287 VTSFEMVIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYNTNYRLLITGTPLQN 345
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + E L +L F+LRR
Sbjct: 346 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDE-------HEVVQQLHKVLRPFLLRR 398
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 399 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQL 454
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L T +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 455 RKCCNHPYLFQGAEPGPPFTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 514
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ ++R A+I F+ G++ FVF++STRAG
Sbjct: 515 ILEDYLMFRGYQYCRIDGNTGGDDRDASIEAFN-----------KPGSEKFVFLLSTRAG 563
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 564 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 623
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ FG + F K I +E+ D +
Sbjct: 624 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 679
Query: 536 GLNSMVE 542
G + E
Sbjct: 680 GEEATAE 686
>gi|195031145|ref|XP_001988297.1| GH10643 [Drosophila grimshawi]
gi|193904297|gb|EDW03164.1| GH10643 [Drosophila grimshawi]
Length = 1931
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 199/540 (36%), Positives = 288/540 (53%), Gaps = 79/540 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPL 95
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PL
Sbjct: 554 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLY-GPFLCVVPL 612
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ + R I + + Q L F+ +LTT
Sbjct: 613 STMTAWQREFDLWAPDMNVVTYLGDVKSRELIHQYEW-------QFEGSKRLKFNCILTT 665
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ +L + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 666 YEIVLKDKQYLGALQWAALLVDEAHRLKNDDSLLYKSLKE-FETNHRLLITGTPLQNSLK 724
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP+ F T F + +A +G +T L L ++LRR K+
Sbjct: 725 ELWALLHFIMPAKFDTWENF------ELQHGNAEDKG-----YTRLHQQLEPYILRRVKK 773
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQK+ Y IL K L + N
Sbjct: 774 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCN 833
Query: 320 HQSLQNTASGKLV------VLDLLLK-------------KLYNSGHRVLLFAQMTQTLDI 360
H +L + +L L LLK KL ++GHRVL+F+QM + LD+
Sbjct: 834 HAALIRPSEFELFGLQQDEALQTLLKGSGKLVLLDKLLCKLKDTGHRVLIFSQMVRMLDV 893
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L D+L+ R +S++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG
Sbjct: 894 LADYLQKRHFSFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGG 942
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++
Sbjct: 943 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 1002
Query: 481 KLRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ ++ DDL +I+ FG LF + + EE
Sbjct: 1003 KMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFKDEQEHEEE 1062
>gi|342866497|gb|EGU72158.1| hypothetical protein FOXB_17402 [Fusarium oxysporum Fo5176]
Length = 2124
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 197/507 (38%), Positives = 274/507 (54%), Gaps = 74/507 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F EL+ Q+ GL++L + G NV+L DEMGLGKT+Q +SFLS+L+ ++ GP
Sbjct: 443 DFIKGGELRNFQLRGLNFLCLNWTKGNNVILADEMGLGKTVQTVSFLSWLRNARRQEGPS 502
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
LV+ PLSV W ++P + + Y+G + R+ IR EH E N F
Sbjct: 503 LVVAPLSVIPAWCDTFNHWSPDINYVVYLGPEDARKIIR----EH--ELLVDGNPKKPKF 556
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VL+T+Y+ +L D FL I W +DEA RLKN S LYN L F +P ++L+TGTP
Sbjct: 557 NVLVTSYEFILQDWQFLQSIKWQTLAVDEAHRLKNRESQLYNRLVS-FGIPCKILITGTP 615
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
IQNNL+EL AL+ F P D++ +S A +E+ L ++ F+
Sbjct: 616 IQNNLAELSALLDFLNPGKVDIDEDL-----DSLSASDA------QEKLQQLHKAIAPFI 664
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRK------------------ 305
LRRTK+ VE LPP TE ++ +Q + Y +IL +
Sbjct: 665 LRRTKE-TVESD---LPPKTEKIIRVELSDVQLEYYKNILTRNYTALCDATNGHKNSLLN 720
Query: 306 ---ELPKL--------------LALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRV 348
EL K+ LA S R + +SGK+++LD LL KL GHRV
Sbjct: 721 IMMELKKISNHPYMFPGAEEKVLAGSVRREDQIKGLIASSGKMMLLDQLLSKLNKDGHRV 780
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL D+ LR Y ++RLDG+I A R AI HF+ A +D
Sbjct: 781 LIFSQMVKMLDILGDYCSLRGYKFQRLDGTIAAGPRRMAINHFN-----------ADDSD 829
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 830 DFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKRPVNIYRLVSKE 889
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVD 495
TVEE ++ RA KL L + + V D
Sbjct: 890 TVEEEVLERARNKLLLEYLTIQAGVTD 916
>gi|255731139|ref|XP_002550494.1| chromo domain protein 1 [Candida tropicalis MYA-3404]
gi|240132451|gb|EER32009.1| chromo domain protein 1 [Candida tropicalis MYA-3404]
Length = 1423
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 195/559 (34%), Positives = 302/559 (54%), Gaps = 82/559 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q ++FLS+L +++ GP L
Sbjct: 353 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHL 412
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W K+ P + + Y+G E R+NIR YE + ++ F+
Sbjct: 413 VVVPLSTVPAWQETFEKWAPDVNCIYYLGNGEARKNIRD--YEFYNQNNKPK------FN 464
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
+LLTTY+ +L D+ L W + +DEA RLKN S LY L+ F + RLL+TGTP+
Sbjct: 465 ILLTTYEYILKDKTELGSFKWQFLAVDEAHRLKNAESSLYEALKS-FKVSNRLLITGTPL 523
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF-TSLKGILSAFM 269
QNN+ EL AL +F MP F ++Q + D++ K +EQ+ L+ ++ F+
Sbjct: 524 QNNVKELAALCNFLMPGKF-NIDQEIDF--DSID--------KEQEQYIKDLQKKINPFI 572
Query: 270 LRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS--------- 314
LRR K+ + + LP + E++ +Q + Y +I+ K L A +
Sbjct: 573 LRRLKKDVEKS----LPSKSERILRVELSDIQTEYYKNIITKNYAALNAGNKGSQISLLN 628
Query: 315 -----SRTANHQSL-----------------QNT------ASGKLVVLDLLLKKLYNSGH 346
+ +NH L +NT +SGK+V+L+ LL +L GH
Sbjct: 629 VMSELKKASNHPYLFDGAEERVLEKAGSYSRENTLRGMIMSSGKMVLLEQLLTRLKKEGH 688
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDIL D++ ++ Y ++RLDG+I + +R +I HF+ A
Sbjct: 689 RVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTIPSSQRKISIDHFN-----------APD 737
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+ F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV V+
Sbjct: 738 SKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVS 797
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE--RTAVETDDLRSII-FGLHLFDPKA 523
+ TVEE I+ RA +K+ L + ++ + D K+ +T T +L I+ FG +
Sbjct: 798 KDTVEEQILERARKKMVLEYAIISLGITDPNAKKNGKTDPSTSELSQILKFGAGTMFKEN 857
Query: 524 INNEESDDLRLSGLNSMVE 542
N ++ ++L L + S E
Sbjct: 858 NNQQKLENLNLDDVLSHAE 876
>gi|391333969|ref|XP_003741382.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Metaseiulus occidentalis]
Length = 1456
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/485 (38%), Positives = 271/485 (55%), Gaps = 61/485 (12%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+EG++WL+ + + +L DEMGLGKT+Q ISFL+YL GPFL++ PL
Sbjct: 441 ELRDYQLEGVNWLVNSWCKANSCILADEMGLGKTIQTISFLNYLFNDHQLYGPFLMVVPL 500
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P+L V+ Y+G+ R IR + ++ + F+VLLTT
Sbjct: 501 STLVAWQREFVNWAPELNVVTYLGDVLSRERIREFEW-------YVTGTKKIKFNVLLTT 553
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
+++L D ++ ++ W +DEA RLKN + LY L++ F RLL+TGTP+QN+L
Sbjct: 554 PEIMLKDATYVGEVDWAVLAVDEAHRLKNDEAQLYKTLQD-FRTKHRLLITGTPLQNSLK 612
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF P F T + F DA ++ L L ++LRR K+
Sbjct: 613 ELWALLHFIEPDRFPTWDTFEGEHHDAQDKG-----------YSKLHKQLEPYLLRRVKK 661
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRK---------------------ELPK--- 309
+ + + + E+T LQK+ Y IL K EL K
Sbjct: 662 DVEKSLPAKVERILRVEMTALQKQYYKWILTKNYKMLTKGVKGSHASFVNIMVELKKCCN 721
Query: 310 ---LLALSSRTANHQSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDF 364
L+ L T L SGKL++LD LL +L +GHRVL+F+QM + LDI+ ++
Sbjct: 722 HCLLIRLPEATNGQDELTQLIRGSGKLLLLDKLLCRLKQTGHRVLIFSQMVRMLDIISEY 781
Query: 365 LELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLN 424
L++R++ ++RLDGSI+ E R A+ HF+ +++ + F F++STRAGG+G+N
Sbjct: 782 LKMRRFQFQRLDGSIKGETRKQALDHFNAENSQD-----------FCFLLSTRAGGLGIN 830
Query: 425 LVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRL 484
L ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT+ +VEE I+ RA+RK+ L
Sbjct: 831 LATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKGSVEEDIIERAKRKMVL 890
Query: 485 SHNVV 489
H V+
Sbjct: 891 DHLVI 895
>gi|341891282|gb|EGT47217.1| CBN-LET-418 protein [Caenorhabditis brenneri]
Length = 1835
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 192/532 (36%), Positives = 277/532 (52%), Gaps = 75/532 (14%)
Query: 25 PVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQM 84
P +E G T L P+Q+EG++WL + G + +L DEMGLGKT+Q+++FL L
Sbjct: 593 PDYVSETGGT--LHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGH 650
Query: 85 SPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVK-------E 137
GPFL+ PLS W E ++ P V+ YVG+R+ R +R + V+ +
Sbjct: 651 CKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGDRDSRVVLREHEFSFVEGAVRSGPK 710
Query: 138 QSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHF 197
+M + F VLLT+Y+ + MD+ LS I W ++DEA RLKN S+ + L E +
Sbjct: 711 AGKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNE-Y 769
Query: 198 LMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ 257
+ R+L+TGTP+QNNL EL+ L++F F L F + F + ++Q
Sbjct: 770 TIHYRVLLTGTPLQNNLEELFHLLNFLSAERFNQLEAFTAEFSEISK----------EDQ 819
Query: 258 FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKL- 310
L +L MLRR K ++ +P +E+ V +QKK Y +IL + L
Sbjct: 820 IEKLHNLLGPHMLRRLKADVL----TGMPSKSELIVRVELSPMQKKWYKNILTRNFDALN 875
Query: 311 -------------LALSSRTANHQSLQNTAS--------------------GKLVVLDLL 337
L + NH L AS GK V+L +
Sbjct: 876 VKNGGTQMSLMNVLMELKKCCNHPYLFAKASLEAPKEKNGMYEGTALIKNAGKFVLLQKM 935
Query: 338 LKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAI 397
L+KL GHRVL+F+QMT +DI++DF ++ Y YER+DGSI + R Q AI
Sbjct: 936 LRKLKEQGHRVLIFSQMTMMMDIMEDFCDVEGYKYERIDGSITGQMR---------QDAI 986
Query: 398 ERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMN 457
+R A G FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHR+GQ +
Sbjct: 987 DRY--NAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKH 1044
Query: 458 HVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDL 509
V+ VT+ +VEE I A++K+ L+H VV + +E K + E DD+
Sbjct: 1045 KVMIYRFVTKGSVEERITSVAKKKMLLNHLVVRAGLGGKEGKSMSKSELDDV 1096
>gi|255551667|ref|XP_002516879.1| helicase, putative [Ricinus communis]
gi|223543967|gb|EEF45493.1| helicase, putative [Ricinus communis]
Length = 1064
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 201/558 (36%), Positives = 303/558 (54%), Gaps = 76/558 (13%)
Query: 22 GQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKF 81
G T + A + +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS + YL
Sbjct: 174 GNTRLVAQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHE 233
Query: 82 SQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM 141
+ GP +V+ P S W++E+ +F P L ++++G ++RR+IR + K
Sbjct: 234 FRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPDERRHIREELLVAGK----- 288
Query: 142 SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
FDV +T++++ + ++ L + W Y IIDEA R+KN +S+L +R +
Sbjct: 289 -------FDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYNTNY 340
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSL 261
RLL+TGTP+QNNL ELW+L++F +P +F + F F+ + + +E L
Sbjct: 341 RLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQL 393
Query: 262 KGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL-------- 307
+L F+LRR K VE G LPP E ++ +QK+ Y ++L+K+L
Sbjct: 394 HKVLRPFLLRRLKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGE 449
Query: 308 -PKLLALS---SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRV 348
+LL ++ + NH L T +GK+V+LD LL KL RV
Sbjct: 450 RKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRV 509
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QMT+ LDIL+D+L R Y Y R+DG+ E+R A+I F+ G++
Sbjct: 510 LIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGEDRDASIEAFN-----------KPGSE 558
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
FVF++STRAGG+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+
Sbjct: 559 KFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEY 618
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AI 524
T+EE ++ RA +KL L V+ + E+ V D+L ++ FG + F K I
Sbjct: 619 TIEEKVIERAYKKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEMVFSSKDSTI 674
Query: 525 NNEESDDLRLSGLNSMVE 542
+E+ D + G + E
Sbjct: 675 TDEDIDRIIAKGEEATAE 692
>gi|358377998|gb|EHK15681.1| hypothetical protein TRIVIDRAFT_56270 [Trichoderma virens Gv29-8]
Length = 1658
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/509 (38%), Positives = 281/509 (55%), Gaps = 78/509 (15%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F V EL+ Q++GL++L + G NV+L DEMGLGKT+Q +SFLS+L+ ++ GP
Sbjct: 458 DFIVGGELREFQLKGLNFLCLNWTRGNNVILADEMGLGKTVQTVSFLSWLRNARRQEGPS 517
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP- 148
LV+ PLSV W ++P + + Y+G + R IR E + N +P
Sbjct: 518 LVVAPLSVIPAWCDTFNNWSPDINYVVYLGPEDARSIIR--------ENELIINGNPKKP 569
Query: 149 -FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
F+VL+T+Y+ +L D FL I W +DEA RLKN S LY L F +P ++L+TG
Sbjct: 570 KFNVLVTSYEFILQDWQFLQSIKWQVLAVDEAHRLKNSESQLYQRL-VGFGIPCKILITG 628
Query: 208 TPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSA 267
TPIQNNL+EL AL+ F P T+++ L D++ ++ A +E+ L ++
Sbjct: 629 TPIQNNLAELSALLDFLNPGKV-TIDEDL----DSLSAADA------QEKLQELHRSIAP 677
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRK---------------- 305
++LRRTK+ VE LPP TE ++ +Q Y +IL +
Sbjct: 678 YILRRTKE-TVESD---LPPKTEKIIRVELSDVQLDYYKNILTRNYAALCDATNGHKNSL 733
Query: 306 -----ELPKL--------------LALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGH 346
EL K+ LA S+R + +SGK++++D LL KL GH
Sbjct: 734 LNIMMELKKVSNHPYMFPGAEERVLAGSTRREDQIKGLIASSGKMMLIDQLLSKLKKDGH 793
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDIL D+L LR Y ++RLDG+I A R AI HF+ + +
Sbjct: 794 RVLIFSQMVRMLDILGDYLSLRGYKFQRLDGTIAAGPRRMAINHFNAEDS---------- 843
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+ F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV+
Sbjct: 844 -EDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKRPVNIYRLVS 902
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVD 495
+ TVEE ++ RA KL L + + V D
Sbjct: 903 KETVEEEVLERARNKLLLEYLTIQAGVTD 931
>gi|6321012|ref|NP_011091.1| Chd1p [Saccharomyces cerevisiae S288c]
gi|418395|sp|P32657.1|CHD1_YEAST RecName: Full=Chromo domain-containing protein 1; AltName:
Full=ATP-dependent helicase CHD1
gi|603404|gb|AAB64691.1| Chd1p: transcriptional regulator [Saccharomyces cerevisiae]
gi|285811798|tpg|DAA07826.1| TPA: Chd1p [Saccharomyces cerevisiae S288c]
gi|392299868|gb|EIW10960.1| Chd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1468
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 281/507 (55%), Gaps = 76/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + G N +L DEMGLGKT+Q ++F+S+L F++ GP +++ P
Sbjct: 374 GELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVP 433
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLL 153
LS W+ K+ P L + Y+G ++ R IR Y + + + + + + F+VLL
Sbjct: 434 LSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKT----MKFNVLL 489
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+ +L D+ L I W + +DEA RLKN S LY L F + R+L+TGTP+QNN
Sbjct: 490 TTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNS-FKVANRMLITGTPLQNN 548
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ EL AL++F MP F T++Q + F++ +E L + F+LRR
Sbjct: 549 IKELAALVNFLMPGRF-TIDQEID-FENQDEEQ--------EEYIHDLHRRIQPFILRRL 598
Query: 274 KQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS------------- 314
K+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 599 KKDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNE 654
Query: 315 -SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRV 348
+ +NH L + A SGK+V+LD LL +L GHRV
Sbjct: 655 LKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRV 714
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + ND
Sbjct: 715 LIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS----------ND 764
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++
Sbjct: 765 -FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKD 823
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVD 495
TVEE ++ RA +K+ L + ++ V D
Sbjct: 824 TVEEEVLERARKKMILEYAIISLGVTD 850
>gi|410076200|ref|XP_003955682.1| hypothetical protein KAFR_0B02490 [Kazachstania africana CBS 2517]
gi|372462265|emb|CCF56547.1| hypothetical protein KAFR_0B02490 [Kazachstania africana CBS 2517]
Length = 1459
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 279/507 (55%), Gaps = 74/507 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ EL+ Q+ G++W+ + N +L DEMGLGKT+Q +SF+S+L +S+ GP LV+
Sbjct: 369 SGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQMVSFISWLVYSRKQNGPHLVVV 428
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
PLS W AK+ P L + Y+G ++ R IR + + NV F+VLL
Sbjct: 429 PLSTMPAWQETFAKWAPGLNCVCYMGNQKSRDTIREFEFYTNPQAKGKKNVK---FNVLL 485
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+ +L D+ L I W + +DEA RLKN S LY L F + RLL+TGTP+QNN
Sbjct: 486 TTYEYILKDRDELGSIKWQFLAVDEAHRLKNAESSLYESLNS-FKVHDRLLITGTPLQNN 544
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ EL AL++F MP F T++Q + F++ + + +E L L F+LRR
Sbjct: 545 IKELAALVNFLMPGRF-TIDQEID-FEN--------QDDEQEEYIRELHKRLQPFILRRL 594
Query: 274 KQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS------------- 314
K+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 595 KKDVEKS----LPSKTERILRVELSDIQTEYYKNILTKNYRALQAGAKGGHISLLNVMSE 650
Query: 315 -SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRV 348
+ +NH L + A SGK+V+LD LL +L GHRV
Sbjct: 651 LKKASNHPYLFDNAEDRVLQKFGDGRMTRDNILRGLIMSSGKMVLLDKLLTRLKKDGHRV 710
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDI+ D+L ++ +++RLDG+I + +R +I HF+ +++
Sbjct: 711 LIFSQMVRMLDIMGDYLSIKGINFQRLDGTIPSAQRRISIDHFNAPDSVDD--------- 761
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
VF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++
Sbjct: 762 --VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKD 819
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVD 495
TVEE ++ RA +K+ L + ++ V D
Sbjct: 820 TVEEEVLERARKKMILEYAIISLGVTD 846
>gi|442633513|ref|NP_001262078.1| Mi-2, isoform D [Drosophila melanogaster]
gi|440216038|gb|AGB94771.1| Mi-2, isoform D [Drosophila melanogaster]
Length = 1973
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 260/503 (51%), Gaps = 71/503 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G +L P+Q+EG++WL + G++ +L DEMGLGKT+Q ++FL L GPFLV
Sbjct: 716 GTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLV 775
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL---- 147
PLS W E + P + Y+G+++ R IR + + S VS L
Sbjct: 776 AVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQ 835
Query: 148 -PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
F+VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+T
Sbjct: 836 YKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YTIAYKLLLT 894
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL EL+ L++F F L F F D +EQ L +L
Sbjct: 895 GTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLG 944
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----- 315
MLRR K +++ +P +E V +QKK Y IL K L + S
Sbjct: 945 PHMLRRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCS 1000
Query: 316 ---------RTANHQSL--------------------QNTASGKLVVLDLLLKKLYNSGH 346
+ NH L A+GKLV+L +LK+L H
Sbjct: 1001 LINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNH 1060
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QMT+ LDIL+DFLE +Y YER+DG I R AI F+ A G
Sbjct: 1061 RVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFN-----------APG 1109
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 1110 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1169
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
++VEE + + A+RK+ L+H VV
Sbjct: 1170 RNSVEERVTQVAKRKMMLTHLVV 1192
>gi|432889219|ref|XP_004075171.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Oryzias latipes]
Length = 1684
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 184/492 (37%), Positives = 272/492 (55%), Gaps = 65/492 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q++ L+W+ + G + +L DEMGLGKT+Q ISFL+YL GPFL+
Sbjct: 467 GDGLELRDYQLDSLNWMAHSWSKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLL 526
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E+ + P++ V+ Y+G+ R IR + H+ + L F++
Sbjct: 527 VVPLSTVTSWQREIQLWAPQMNVVVYLGDISSRNMIRTHEWIHLHSRR-------LKFNI 579
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
LLTTY+++L D+ FL + W + +DEA RLKN S+LY + + F RLL+TGTP+Q
Sbjct: 580 LLTTYEILLKDKTFLGNVNWAFIGVDEAHRLKNDDSLLYKTMID-FKSNHRLLITGTPLQ 638
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F + F +A H GK ++ +TSL L F+L
Sbjct: 639 NSLKELWSLLHFIMPDKFHSWEHF-----EADH-------GKGRDSGYTSLHKELEPFLL 686
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS-------------- 314
RR K+ + + + + E+T +QK+ Y IL + L +
Sbjct: 687 RRVKKDVEKSLPAKVEQILRVEMTAVQKQYYKWILTRNYKALSKGTKGSTSGFLNVMMEL 746
Query: 315 SRTANHQSLQNTAS----GKLVVLDLLLK-------------KLYNSGHRVLLFAQMTQT 357
+ NH L K+ L LL++ +L GHRVL+F+QM +
Sbjct: 747 KKCCNHCYLIKPPDDEFLSKVEALQLLIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRM 806
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL D+L R++ ++RLDGSI+ E R A+ HF+ A G++ F F++STR
Sbjct: 807 LDILADYLRSRQFLFQRLDGSIKGEMRKQALDHFN-----------AEGSEDFCFLLSTR 855
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT +VEE I+ R
Sbjct: 856 AGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQVNIYRLVTRGSVEEDIIER 915
Query: 478 AERKLRLSHNVV 489
A++K+ L H V+
Sbjct: 916 AKKKMVLDHLVI 927
>gi|196002339|ref|XP_002111037.1| hypothetical protein TRIADDRAFT_54568 [Trichoplax adhaerens]
gi|190586988|gb|EDV27041.1| hypothetical protein TRIADDRAFT_54568 [Trichoplax adhaerens]
Length = 1562
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/486 (37%), Positives = 268/486 (55%), Gaps = 70/486 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
T +L+ +Q++ L+W+I + +++L DEMGLGKT+Q ISFLSYL S G FL++
Sbjct: 411 THQLRDYQLDSLNWMIHAWCKENSIILADEMGLGKTIQVISFLSYLYHSHSLYGIFLLVV 470
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
PLS W E + P + V+ Y+G+ + RR IR + + ++ F+ LL
Sbjct: 471 PLSTMTSWQREFELWAPDINVVVYLGDTKSRRMIRDYDWYNSNKR--------FKFNALL 522
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY++VL D+ L W +DEA RLKN S+LY L E F RLL+TGTP+QN+
Sbjct: 523 TTYEIVLKDKDILKSFKWACLAVDEAHRLKNDDSLLYRYLME-FKTDHRLLITGTPLQNS 581
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELW+L+HF M + + +F +F SS + SL L ++LRR
Sbjct: 582 LKELWSLLHFIMEKRYDSWEKFKDSFMKDDGSS-----------YMSLHQELQPYILRRV 630
Query: 274 KQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKL--------------LALSSRT 317
K+ + + + + E+T +QK+ Y I+ + L + +
Sbjct: 631 KKDVEKSLPAKVEQILRVEMTAIQKQYYRWIITRNYKALSKGAKGSLGGFINIMMELKKC 690
Query: 318 ANHQSL-----QNT---------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQD 363
NH SL +N SGK+++LD LL +L +GHRVL+F+QM + LDIL +
Sbjct: 691 CNHASLVKMEEKNNKDAIQSLLRGSGKMILLDKLLCRLKETGHRVLIFSQMVRMLDILAE 750
Query: 364 FLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGL 423
+L+++ + ++RLDGSIR + R A+ HF+ A G+ F F++STRAGG+GL
Sbjct: 751 YLQIKHFLFQRLDGSIRGDLRKQALDHFN-----------ADGSQDFCFLLSTRAGGLGL 799
Query: 424 NLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLR 483
NL +ADTVI ++ DWNPQ D QA RAHRIGQ +++VEE I+ RA +K+
Sbjct: 800 NLASADTVIIFDSDWNPQNDIQAQSRAHRIGQRK---------QNSVEEEIIERATKKMV 850
Query: 484 LSHNVV 489
L H V+
Sbjct: 851 LDHLVI 856
>gi|259146092|emb|CAY79352.1| Chd1p [Saccharomyces cerevisiae EC1118]
gi|323348857|gb|EGA83095.1| Chd1p [Saccharomyces cerevisiae Lalvin QA23]
gi|349577825|dbj|GAA22993.1| K7_Chd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1468
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 281/507 (55%), Gaps = 76/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + G N +L DEMGLGKT+Q ++F+S+L F++ GP +++ P
Sbjct: 374 GELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVP 433
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLL 153
LS W+ K+ P L + Y+G ++ R IR Y + + + + + + F+VLL
Sbjct: 434 LSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKT----MKFNVLL 489
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+ +L D+ L I W + +DEA RLKN S LY L F + R+L+TGTP+QNN
Sbjct: 490 TTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNS-FKVANRMLITGTPLQNN 548
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ EL AL++F MP F T++Q + F++ +E L + F+LRR
Sbjct: 549 IKELAALVNFLMPGRF-TIDQEID-FENQDEEQ--------EEYIHDLHRRIQPFILRRL 598
Query: 274 KQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS------------- 314
K+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 599 KKDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNE 654
Query: 315 -SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRV 348
+ +NH L + A SGK+V+LD LL +L GHRV
Sbjct: 655 LKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRV 714
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + ND
Sbjct: 715 LIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS----------ND 764
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++
Sbjct: 765 -FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKD 823
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVD 495
TVEE ++ RA +K+ L + ++ V D
Sbjct: 824 TVEEEVLERARKKMILEYAIISLGVTD 850
>gi|256271313|gb|EEU06383.1| Chd1p [Saccharomyces cerevisiae JAY291]
Length = 1468
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 281/507 (55%), Gaps = 76/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + G N +L DEMGLGKT+Q ++F+S+L F++ GP +++ P
Sbjct: 374 GELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVP 433
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLL 153
LS W+ K+ P L + Y+G ++ R IR Y + + + + + + F+VLL
Sbjct: 434 LSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKT----MKFNVLL 489
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+ +L D+ L I W + +DEA RLKN S LY L F + R+L+TGTP+QNN
Sbjct: 490 TTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNS-FKVANRMLITGTPLQNN 548
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ EL AL++F MP F T++Q + F++ +E L + F+LRR
Sbjct: 549 IKELAALVNFLMPGRF-TIDQEID-FENQDEEQ--------EEYIHDLHRRIQPFILRRL 598
Query: 274 KQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS------------- 314
K+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 599 KKDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNE 654
Query: 315 -SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRV 348
+ +NH L + A SGK+V+LD LL +L GHRV
Sbjct: 655 LKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRV 714
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + ND
Sbjct: 715 LIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS----------ND 764
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++
Sbjct: 765 -FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKD 823
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVD 495
TVEE ++ RA +K+ L + ++ V D
Sbjct: 824 TVEEEVLERARKKMILEYAIISLGVTD 850
>gi|380476817|emb|CCF44500.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1599
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 189/506 (37%), Positives = 270/506 (53%), Gaps = 83/506 (16%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ GL++L + NV+L DEMGLGKT+Q++SFLS+L+ + GPFL++ P
Sbjct: 452 GELRSFQLRGLNFLCLNWTRANNVILADEMGLGKTVQSVSFLSWLRNEREQEGPFLIVAP 511
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP--FDVL 152
LSV W ++P + + Y+G R IR + M N +P F+ L
Sbjct: 512 LSVIPAWGDTFDHWSPDMNYVVYLGNETSRSTIR--------DNELMVNGNPKKPKFNAL 563
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T+Y+++L D FL QI W ++DEA RLKN S LY L F +P ++L+TGTPIQN
Sbjct: 564 ITSYEMILQDWQFLQQIKWQALLVDEAHRLKNKESQLYARL-VGFGVPCKILITGTPIQN 622
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL+EL ALM F P +++ L +E+ L ++ ++LRR
Sbjct: 623 NLAELSALMDFLNPGKV-VIDEELENLAG----------NDTQEKLQDLHKSIAPYILRR 671
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQSLQN- 325
TK+ VE LPP TE ++ +Q + Y +IL + ALS+ T SL N
Sbjct: 672 TKE-TVESD---LPPKTEKIIRVELSDVQLEYYKNILTR---NYAALSNATGQKNSLLNI 724
Query: 326 ------------------------------------TASGKLVVLDLLLKKLYNSGHRVL 349
+SGK+++LD LL KL GHRVL
Sbjct: 725 MMELKKVSNHPYMFAGAEDRVLAGSTRREDQIKGLIASSGKMMLLDQLLTKLKKDGHRVL 784
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D++ LR Y ++RLDG+I A R AI HF+ + + D
Sbjct: 785 VFSQMVKMLDILSDYMALRGYKFQRLDGTIAAGPRRMAINHFNAEDS-----------DD 833
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++ T
Sbjct: 834 FCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMGRAHRIGQKKPVSIYRLVSKET 893
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD 495
VEE ++ RA KL L + + V D
Sbjct: 894 VEEEVLERARNKLLLEYLTIQAGVTD 919
>gi|151944881|gb|EDN63140.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
Length = 1468
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 281/507 (55%), Gaps = 76/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + G N +L DEMGLGKT+Q ++F+S+L F++ GP +++ P
Sbjct: 374 GELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVP 433
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLL 153
LS W+ K+ P L + Y+G ++ R IR Y + + + + + + F+VLL
Sbjct: 434 LSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKT----MKFNVLL 489
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+ +L D+ L I W + +DEA RLKN S LY L F + R+L+TGTP+QNN
Sbjct: 490 TTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNS-FKVANRMLITGTPLQNN 548
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ EL AL++F MP F T++Q + F++ +E L + F+LRR
Sbjct: 549 IKELAALVNFLMPGRF-TIDQEID-FENQDEEQ--------EEYIHDLHRRIQPFILRRL 598
Query: 274 KQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS------------- 314
K+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 599 KKDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNE 654
Query: 315 -SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRV 348
+ +NH L + A SGK+V+LD LL +L GHRV
Sbjct: 655 LKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRV 714
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + ND
Sbjct: 715 LIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS----------ND 764
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++
Sbjct: 765 -FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKD 823
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVD 495
TVEE ++ RA +K+ L + ++ V D
Sbjct: 824 TVEEEVLERARKKMILEYAIISLGVTD 850
>gi|62472261|ref|NP_001014591.1| Mi-2, isoform B [Drosophila melanogaster]
gi|61678453|gb|AAX52739.1| Mi-2, isoform B [Drosophila melanogaster]
Length = 1983
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 260/503 (51%), Gaps = 71/503 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G +L P+Q+EG++WL + G++ +L DEMGLGKT+Q ++FL L GPFLV
Sbjct: 726 GTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLV 785
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL---- 147
PLS W E + P + Y+G+++ R IR + + S VS L
Sbjct: 786 AVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQ 845
Query: 148 -PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
F+VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+T
Sbjct: 846 YKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YTIAYKLLLT 904
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL EL+ L++F F L F F D +EQ L +L
Sbjct: 905 GTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLG 954
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----- 315
MLRR K +++ +P +E V +QKK Y IL K L + S
Sbjct: 955 PHMLRRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCS 1010
Query: 316 ---------RTANHQSL--------------------QNTASGKLVVLDLLLKKLYNSGH 346
+ NH L A+GKLV+L +LK+L H
Sbjct: 1011 LINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNH 1070
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QMT+ LDIL+DFLE +Y YER+DG I R AI F+ A G
Sbjct: 1071 RVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFN-----------APG 1119
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 1120 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1179
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
++VEE + + A+RK+ L+H VV
Sbjct: 1180 RNSVEERVTQVAKRKMMLTHLVV 1202
>gi|195020242|ref|XP_001985154.1| GH16907 [Drosophila grimshawi]
gi|193898636|gb|EDV97502.1| GH16907 [Drosophila grimshawi]
Length = 2013
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 188/499 (37%), Positives = 264/499 (52%), Gaps = 71/499 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L P+Q+EG++WL + G++ +L DEMGLGKT+Q ++FL L GPFLV PL
Sbjct: 728 QLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPL 787
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR---TMYEHVKEQSQMSNV--SPLPFD 150
S W E + P + Y+G+++ R IR T E +++S + + F+
Sbjct: 788 STLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELTFEEGAIRGTKVSRLRTTQYKFN 847
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+TGTP+
Sbjct: 848 VLLTSYELISMDAPCLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YAIAYKLLLTGTPL 906
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL+ L++F F L F F D +EQ L +L ML
Sbjct: 907 QNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLGPHML 956
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS--------- 315
RR K +++ +P +E V +QKK Y IL K L + S
Sbjct: 957 RRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINI 1012
Query: 316 -----RTANHQSLQNTAS--------------------GKLVVLDLLLKKLYNSGHRVLL 350
+ NH L +AS GKLV+L +LK+L + HRVL+
Sbjct: 1013 MMDLKKCCNHPYLFPSASEEAPTSAGGIYELLSLTKAAGKLVLLSKMLKQLKSQNHRVLI 1072
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LDIL+DFLE +Y YER+DGSI R AI F+ A G F
Sbjct: 1073 FSQMTKMLDILEDFLEGEQYKYERIDGSITGTLRQEAIDRFN-----------APGAQQF 1121
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT ++V
Sbjct: 1122 VFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSV 1181
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE + + A+RK+ L+H VV
Sbjct: 1182 EERVTQVAKRKMMLTHLVV 1200
>gi|402224068|gb|EJU04131.1| hypothetical protein DACRYDRAFT_76460 [Dacryopinax sp. DJM-731 SS1]
Length = 1461
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 189/497 (38%), Positives = 273/497 (54%), Gaps = 71/497 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LKP Q+ GL+WL + G N +L DEMGLGKT+Q ++FLS+L S+ GPF V+ P
Sbjct: 354 GQLKPFQLHGLNWLQHLWSKGENGILADEMGLGKTVQTVTFLSWLAHSRHQHGPFCVVVP 413
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W + + P L + + G R IR YE N P F+VL+T
Sbjct: 414 LSTLPAWCDQFNAWAPDLYWVVWYGSARSREVIRE--YEFYT--GPKGNRKPR-FNVLIT 468
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L I W +DEA RLKN + LY L F +LL+TGTP+QN++
Sbjct: 469 TYEYILKDRDTLQGIKWQALAVDEAHRLKNSDAQLYETLF-GFNCAFKLLITGTPLQNSI 527
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL ALMHF P + L+T + H++ ++ I++ L+ LS MLRR K
Sbjct: 528 KELLALMHFLAPQHYS-----LTTADEYEHATPEEQQKFIEQ----LQDQLSGMMLRRLK 578
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL-------------PKLLALS- 314
+ +V+ +P +E ++ LQ+ Y +IL K P++ L+
Sbjct: 579 RDVVKD----MPTKSERILRVEMSALQRHYYKNILTKNFVVLKNKGPSGGPGPQISLLNI 634
Query: 315 ----SRTANHQSLQN-----------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ ANH L + +SGK+V+LD LL +L HRVL+F+Q
Sbjct: 635 AMELKKAANHPYLFDGCEEHSDNPEEQLKGIVMSSGKMVLLDKLLHRLKTDSHRVLIFSQ 694
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M + LDIL D+L +R Y ++RLDG++ +E R AI HF+ + G+ FVF+
Sbjct: 695 MVRLLDILSDYLTMRNYQHQRLDGTVSSEIRRKAIEHFNSE-----------GSQDFVFL 743
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ TVEE
Sbjct: 744 LSTRAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTVEED 803
Query: 474 IMRRAERKLRLSHNVVG 490
+++RA+ K+ L + VVG
Sbjct: 804 VLQRAKAKMALEYAVVG 820
>gi|400602704|gb|EJP70306.1| SNF2 family chromodomain-helicase DNA-binding protein [Beauveria
bassiana ARSEF 2860]
Length = 1674
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 202/525 (38%), Positives = 285/525 (54%), Gaps = 85/525 (16%)
Query: 18 DERDGQTPVDA-AEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL 76
D R T +DA ++ EL+P Q+ GL++L + G NV+L DEMGLGKT+Q +SFL
Sbjct: 452 DTRSRMTKLDAQPKYIQNGELRPFQLRGLNFLCLNWCRGNNVILADEMGLGKTVQTVSFL 511
Query: 77 SYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVK 136
S+L+ + GP LV+ PLSV W ++P L + Y+G E RNI ++
Sbjct: 512 SWLRNCRKQEGPSLVVAPLSVIPAWCDTFNNWSPDLNYVVYLGP-EDARNI-------IR 563
Query: 137 EQSQMSNVSPLP--FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR 194
E + + +P F+VL+T+Y+ +L D FL I + +DEA RLKN S LY L
Sbjct: 564 ENELLVDGNPKKPKFNVLVTSYEFILQDWQFLQSIKFQVLAVDEAHRLKNSESQLYMRL- 622
Query: 195 EHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKI 254
F +P ++L+TGTPIQNNLSEL AL+ F P ++Q L T AV +
Sbjct: 623 VGFGIPCKVLITGTPIQNNLSELAALLDFLNPGKV-KIDQDLDTLA-AVDA--------- 671
Query: 255 KEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELP 308
+E+ L ++ ++LRRTK+ VE LPP TE ++ +Q Y +IL +
Sbjct: 672 QEKLQELHSAIAPYILRRTKE-TVESD---LPPKTEKIIRVELSDVQLDYYKNILTR--- 724
Query: 309 KLLALSSRTANHQ-SLQN-------------------------------------TASGK 330
ALS ++ H+ SL N T+SGK
Sbjct: 725 NYAALSDASSGHKNSLLNIMMELKKISNHPYMFPGAEERVLAGSIRREDQIKGLITSSGK 784
Query: 331 LVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRH 390
+++LD LL KL GHRVL+F+QM + LDIL D++ LR Y ++RLDG+I A R AI H
Sbjct: 785 MMLLDQLLSKLKKDGHRVLIFSQMVKMLDILGDYMSLRGYKFQRLDGTIAAGPRRMAINH 844
Query: 391 FSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA 450
F+ A ++ F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RA
Sbjct: 845 FN-----------ADDSEDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARA 893
Query: 451 HRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVD 495
HRIGQ V LV++ TVEE ++ RA KL L + + V D
Sbjct: 894 HRIGQKRPVNIYRLVSKETVEEEVLERARNKLLLEYLTIQAGVTD 938
>gi|413917663|gb|AFW57595.1| chromatin complex subunit A [Zea mays]
gi|413917664|gb|AFW57596.1| hypothetical protein ZEAMMB73_374331 [Zea mays]
Length = 803
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 182/506 (35%), Positives = 276/506 (54%), Gaps = 61/506 (12%)
Query: 14 IHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAI 73
+H +E+ + P A E G EL+P+Q+EGL W++ + +N +L DEMGLGKT+Q I
Sbjct: 97 VHSIEEKVTEQP-SALEGG---ELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTI 152
Query: 74 SFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE 133
+ ++YL ++ GP L++ P +V W +E + P + + Y G E+R+ +R
Sbjct: 153 ALIAYLLENKEVAGPHLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPEERKLLRE---- 208
Query: 134 HVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
N L F+VLLT YD++L D+ FL ++ W Y I+DE RLKN L L
Sbjct: 209 --------KNFDGLQFNVLLTHYDLILKDKKFLKKVHWHYLIVDEGHRLKNHECALARTL 260
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGK 253
+ + RRLL+TGTPIQN+L ELW+L++F +P++F + F F + +
Sbjct: 261 VSGYQIRRRLLLTGTPIQNSLQELWSLLNFILPNIFNSSQNFEEWFNAPFACDVSLNDEE 320
Query: 254 IKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKEL 307
L +L F+LRR K ++ + LP T++ + QK Y + +E
Sbjct: 321 QLLIIHRLHQVLRPFLLRRKKDEVEK----YLPVKTQVILKCDMSAWQKAYYEQVTSREK 376
Query: 308 PKL-LALSSRTANHQSLQ-----------------------NTASGKLVVLDLLLKKLYN 343
L L S+ + S+Q ASGK +LD LL KL
Sbjct: 377 VALGFGLRSKALQNLSMQLRKCCNHPYLFVEHYNMYQREEIVRASGKFELLDRLLPKLQR 436
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
+GHRVLLF+QMT+ LD+L+ +L++ + Y RLDGS + EER + F+ + +
Sbjct: 437 AGHRVLLFSQMTKLLDVLEIYLQMYNFKYMRLDGSTKTEERGRLLADFNKKDS------- 489
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
+ F+F++STRAGG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ N V
Sbjct: 490 ----EYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKNEVRVFV 545
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVV 489
LV+ ++EE I+ RA++K+ + V+
Sbjct: 546 LVSVGSIEEEILDRAKQKMGIDAKVI 571
>gi|195128581|ref|XP_002008741.1| GI13663 [Drosophila mojavensis]
gi|193920350|gb|EDW19217.1| GI13663 [Drosophila mojavensis]
Length = 1992
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 188/499 (37%), Positives = 263/499 (52%), Gaps = 71/499 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L P+Q+EG++WL + G++ +L DEMGLGKT+Q ++FL L GPFLV PL
Sbjct: 720 QLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPL 779
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR---TMYEHVKEQSQMSNV--SPLPFD 150
S W E + P + Y+G+++ R IR T E +++S + + F+
Sbjct: 780 STLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELTFEEGAIRGTKVSRLRTTQYKFN 839
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+TGTP+
Sbjct: 840 VLLTSYELISMDAPCLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YSIAYKLLLTGTPL 898
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL+ L++F F L F F D +EQ L +L ML
Sbjct: 899 QNNLEELFHLLNFLSREKFNDLQAFQGEFADVSK----------EEQVKRLHEMLGPHML 948
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS--------- 315
RR K +++ +P +E V +QKK Y IL K L + S
Sbjct: 949 RRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINI 1004
Query: 316 -----RTANHQSL--------------------QNTASGKLVVLDLLLKKLYNSGHRVLL 350
+ NH L A+GKLV+L +LK+L GHRVL+
Sbjct: 1005 MMDLKKCCNHPYLFPSGSEDAPTSAGGIYEINSLTKAAGKLVLLSKMLKQLKAQGHRVLI 1064
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LDIL+DFLE +Y YER+DGSI R AI F+ A G F
Sbjct: 1065 FSQMTKMLDILEDFLEGEQYKYERIDGSITGTVRQEAIDRFN-----------APGAQQF 1113
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT ++V
Sbjct: 1114 VFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSV 1173
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE + + A+RK+ L+H VV
Sbjct: 1174 EERVTQVAKRKMMLTHLVV 1192
>gi|190405721|gb|EDV08988.1| chromo domain protein 1 [Saccharomyces cerevisiae RM11-1a]
Length = 1436
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 281/507 (55%), Gaps = 76/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + G N +L DEMGLGKT+Q ++F+S+L F++ GP +++ P
Sbjct: 342 GELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVP 401
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLL 153
LS W+ K+ P L + Y+G ++ R IR Y + + + + + + F+VLL
Sbjct: 402 LSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKT----MKFNVLL 457
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+ +L D+ L I W + +DEA RLKN S LY L F + R+L+TGTP+QNN
Sbjct: 458 TTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNS-FKVANRMLITGTPLQNN 516
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ EL AL++F MP F T++Q + F++ +E L + F+LRR
Sbjct: 517 IKELAALVNFLMPGRF-TIDQEID-FENQDEEQ--------EEYIHDLHRRIQPFILRRL 566
Query: 274 KQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS------------- 314
K+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 567 KKDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNE 622
Query: 315 -SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRV 348
+ +NH L + A SGK+V+LD LL +L GHRV
Sbjct: 623 LKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRV 682
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + ND
Sbjct: 683 LIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS----------ND 732
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++
Sbjct: 733 -FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKD 791
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVD 495
TVEE ++ RA +K+ L + ++ V D
Sbjct: 792 TVEEEVLERARKKMILEYAIISLGVTD 818
>gi|50306047|ref|XP_452985.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642118|emb|CAH01836.1| KLLA0C17578p [Kluyveromyces lactis]
Length = 1525
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 204/584 (34%), Positives = 308/584 (52%), Gaps = 88/584 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + N +L DEMGLGKT+Q +SF+S+L +++ GP LV+ P
Sbjct: 386 GELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVSFISWLIYARRQNGPHLVVVP 445
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W K+ P L + Y+G + R I+ YE Q L F+VLLT
Sbjct: 446 LSTMPAWQETFDKWAPGLNCVYYMGNQASRDLIQD--YEFYT-NPQAKGKKHLKFNVLLT 502
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L I W + +DEA RLKN S LY L F + RLL+TGTP+QNN+
Sbjct: 503 TYEYILKDRSTLGSIKWQFLAVDEAHRLKNAESSLYESLNS-FKVANRLLITGTPLQNNI 561
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL++F MP F T++Q + F++ +E L L F+LRR K
Sbjct: 562 KELAALVNFLMPGRF-TIDQEID-FENQDEQQ--------EEYIRDLHKRLQPFILRRLK 611
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLA---------------- 312
+ + + LP T E++ +Q + Y +IL K L +
Sbjct: 612 KDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTSGIKGGHVSLLNVMNEL 667
Query: 313 -----------------LSSRTANHQSLQNT------ASGKLVVLDLLLKKLYNSGHRVL 349
LS H+S +N +SGK+V+LD LL +L GHRVL
Sbjct: 668 KKASNHPYLFDNAEERVLSKFGDGHKSRENILRGLIMSSGKMVLLDKLLTRLKKDGHRVL 727
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + + ND
Sbjct: 728 IFSQMVRILDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNAEDS----------ND- 776
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ V++ T
Sbjct: 777 FVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDT 836
Query: 470 VEEVIMRRAERKLRLSHNVV------GDDVVDREVKERTAVETDDLRSIIFGL-HLFDPK 522
VEE ++ RA +K+ L + ++ G+ + + E +A E ++ + FG ++F P
Sbjct: 837 VEEEVLERARKKMILEYAIISLGVTDGNKISSTKKNEPSAGELSEI--LKFGAGNMFKPN 894
Query: 523 AINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAG----RKFEV 562
N ++ +DL L + + E I S G R+FEV
Sbjct: 895 D-NQQKLEDLNLDEVLNHAEDHITTPELGESNLGGEEFLRQFEV 937
>gi|24667055|ref|NP_649154.2| Mi-2, isoform A [Drosophila melanogaster]
gi|281366478|ref|NP_001163476.1| Mi-2, isoform C [Drosophila melanogaster]
gi|13124018|sp|O97159.2|CHDM_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein Mi-2 homolog;
AltName: Full=ATP-dependent helicase Mi-2; Short=dMi-2
gi|23093096|gb|AAF49099.2| Mi-2, isoform A [Drosophila melanogaster]
gi|272455249|gb|ACZ94747.1| Mi-2, isoform C [Drosophila melanogaster]
Length = 1982
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 260/503 (51%), Gaps = 71/503 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G +L P+Q+EG++WL + G++ +L DEMGLGKT+Q ++FL L GPFLV
Sbjct: 725 GTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLV 784
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL---- 147
PLS W E + P + Y+G+++ R IR + + S VS L
Sbjct: 785 AVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQ 844
Query: 148 -PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
F+VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+T
Sbjct: 845 YKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YTIAYKLLLT 903
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL EL+ L++F F L F F D +EQ L +L
Sbjct: 904 GTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLG 953
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----- 315
MLRR K +++ +P +E V +QKK Y IL K L + S
Sbjct: 954 PHMLRRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCS 1009
Query: 316 ---------RTANHQSL--------------------QNTASGKLVVLDLLLKKLYNSGH 346
+ NH L A+GKLV+L +LK+L H
Sbjct: 1010 LINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNH 1069
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QMT+ LDIL+DFLE +Y YER+DG I R AI F+ A G
Sbjct: 1070 RVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFN-----------APG 1118
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 1119 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1178
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
++VEE + + A+RK+ L+H VV
Sbjct: 1179 RNSVEERVTQVAKRKMMLTHLVV 1201
>gi|320170047|gb|EFW46946.1| helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1078
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/515 (37%), Positives = 281/515 (54%), Gaps = 71/515 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +Q+ GL+W+I+ Y G+N +L DEMGLGKTLQ+IS L Y+K + L++ P
Sbjct: 176 GKMRDYQIRGLNWMIQAYENGINGILADEMGLGKTLQSISMLGYIKNIKKIKSHNLLVVP 235
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E ++ P L V+ + G +E R +T ++P +DV +T
Sbjct: 236 KSTLTNWMNEFRRWCPSLRVICFHGPKEWRAEFAQT------------TLAPGDWDVCVT 283
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ ++ L + + Y ++DEA +KN +S L VLRE F RLL+TGTP+QNNL
Sbjct: 284 SYEITYREKAALRKFNFHYLVLDEAHSIKNEASRLATVLRE-FKTKNRLLLTGTPLQNNL 342
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P +F + + F + F ++ SS+ E + L IL F+LRR K
Sbjct: 343 HELWALLNFLLPDIFASSDDFDAWF--SLTSST-----DQLEVVSRLHAILKPFLLRRLK 395
Query: 275 QKLVECGHLMLPP-----LTEITVLQKKVYASILRKEL-------------PKLLALSSR 316
E +LP +T Q++VY IL K+L +L +
Sbjct: 396 ---AEVEKSLLPKKETKIYIGLTPKQREVYQGILLKDLDVVNSGNANKVRLSNILMQLRK 452
Query: 317 TANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L + A GK+ VLD LL KL G RVL+F+QMT+ LDIL
Sbjct: 453 CCNHPYLFDGTEPGPPYTTDKHLLDACGKMSVLDKLLPKLQAQGSRVLIFSQMTRMLDIL 512
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D+ R ++Y RLDG E+R I ++ A + F+F++STRAGG+
Sbjct: 513 EDYCMWRGHTYCRLDGQTDHEDRARMIDEYN-----------APNSSKFLFLLSTRAGGL 561
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTVI Y+ DWNPQ+D QA RAHRIGQ V VTE+TVEE I+ RAE K
Sbjct: 562 GINLYTADTVILYDSDWNPQMDLQAQDRAHRIGQKKQVRIFRFVTENTVEERIIERAEMK 621
Query: 482 LRLSHNVVGDDVVDREVKERTAVETDDLRSII-FG 515
LRL V+ R V+++ A+ DD+ S+I FG
Sbjct: 622 LRLDAMVIQQ---GRLVEQQKALNKDDMLSMIRFG 653
>gi|270013510|gb|EFA09958.1| hypothetical protein TcasGA2_TC012115 [Tribolium castaneum]
Length = 1969
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/500 (38%), Positives = 267/500 (53%), Gaps = 73/500 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L +Q+EGL+WL + G++ +L DEMGLGKT+Q I+FL L GPFLV PL
Sbjct: 724 QLHNYQLEGLNWLRYSWGQGIDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPL 783
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY---EHVKEQSQMSNV--SPLPFD 150
S W E + P V+ YVG+++ R IR + E+V + ++S V S + F+
Sbjct: 784 STIINWEREFETWAPDFYVITYVGDKDSRAVIRENEFSFEENVSKSGRISRVKASSIKFN 843
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLT+Y+++ +D L I W ++DEA RLK+ S + +L + + +LL+TGTP+
Sbjct: 844 VLLTSYELISIDATCLGSIEWAVLVVDEAHRLKSNQSKFFRLLNSYNIQ-YKLLLTGTPL 902
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL+ L++F F L F + F D +EQ L +L ML
Sbjct: 903 QNNLEELFHLLNFLNSQKFNDLATFQNEFADISK----------EEQVKKLHELLGPHML 952
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL----PKLLALS------ 314
RR K +++ +P +E V +QKK Y IL + PK S
Sbjct: 953 RRLKADVLK----NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQSVSLLNI 1008
Query: 315 ----SRTANH---------------------QSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
+ NH QSL ASGKLV+L +L+ L GHRVL
Sbjct: 1009 MMDLKKCCNHPYLFPVAAEEAPIGPTGGYDIQSLIK-ASGKLVLLAKMLRILREQGHRVL 1067
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QMT+ LDIL+DFLE Y YER+DG+I R AI F+ A G
Sbjct: 1068 IFSQMTKMLDILEDFLEGEGYKYERIDGAITGSSRQEAIDRFN-----------APGAQQ 1116
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT ++
Sbjct: 1117 FVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNS 1176
Query: 470 VEEVIMRRAERKLRLSHNVV 489
VEE + + A+RK+ L+H VV
Sbjct: 1177 VEERVTQVAKRKMMLTHLVV 1196
>gi|4325130|gb|AAD17276.1| dMi-2 protein [Drosophila melanogaster]
Length = 1982
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 260/503 (51%), Gaps = 71/503 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G +L P+Q+EG++WL + G++ +L DEMGLGKT+Q ++FL L GPFLV
Sbjct: 725 GTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLV 784
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL---- 147
PLS W E + P + Y+G+++ R IR + + S VS L
Sbjct: 785 AVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQ 844
Query: 148 -PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
F+VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+T
Sbjct: 845 YKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YTIAYKLLLT 903
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL EL+ L++F F L F F D +EQ L +L
Sbjct: 904 GTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLG 953
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----- 315
MLRR K +++ +P +E V +QKK Y IL K L + S
Sbjct: 954 PHMLRRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCS 1009
Query: 316 ---------RTANHQSL--------------------QNTASGKLVVLDLLLKKLYNSGH 346
+ NH L A+GKLV+L +LK+L H
Sbjct: 1010 LINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNH 1069
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QMT+ LDIL+DFLE +Y YER+DG I R AI F+ A G
Sbjct: 1070 RVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFN-----------APG 1118
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 1119 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1178
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
++VEE + + A+RK+ L+H VV
Sbjct: 1179 RNSVEERVTQVAKRKMMLTHLVV 1201
>gi|189240851|ref|XP_001812556.1| PREDICTED: similar to chromodomain helicase-DNA-binding protein 3
[Tribolium castaneum]
Length = 1966
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/500 (38%), Positives = 267/500 (53%), Gaps = 73/500 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L +Q+EGL+WL + G++ +L DEMGLGKT+Q I+FL L GPFLV PL
Sbjct: 721 QLHNYQLEGLNWLRYSWGQGIDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSVPL 780
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY---EHVKEQSQMSNV--SPLPFD 150
S W E + P V+ YVG+++ R IR + E+V + ++S V S + F+
Sbjct: 781 STIINWEREFETWAPDFYVITYVGDKDSRAVIRENEFSFEENVSKSGRISRVKASSIKFN 840
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLT+Y+++ +D L I W ++DEA RLK+ S + +L + + +LL+TGTP+
Sbjct: 841 VLLTSYELISIDATCLGSIEWAVLVVDEAHRLKSNQSKFFRLLNSYNIQ-YKLLLTGTPL 899
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL+ L++F F L F + F D +EQ L +L ML
Sbjct: 900 QNNLEELFHLLNFLNSQKFNDLATFQNEFADISK----------EEQVKKLHELLGPHML 949
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL----PKLLALS------ 314
RR K +++ +P +E V +QKK Y IL + PK S
Sbjct: 950 RRLKADVLK----NMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQSVSLLNI 1005
Query: 315 ----SRTANH---------------------QSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
+ NH QSL ASGKLV+L +L+ L GHRVL
Sbjct: 1006 MMDLKKCCNHPYLFPVAAEEAPIGPTGGYDIQSLIK-ASGKLVLLAKMLRILREQGHRVL 1064
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QMT+ LDIL+DFLE Y YER+DG+I R AI F+ A G
Sbjct: 1065 IFSQMTKMLDILEDFLEGEGYKYERIDGAITGSSRQEAIDRFN-----------APGAQQ 1113
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT ++
Sbjct: 1114 FVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNS 1173
Query: 470 VEEVIMRRAERKLRLSHNVV 489
VEE + + A+RK+ L+H VV
Sbjct: 1174 VEERVTQVAKRKMMLTHLVV 1193
>gi|347837698|emb|CCD52270.1| similar to chromodomain helicase (Chd1) [Botryotinia fuckeliana]
Length = 1531
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/525 (36%), Positives = 276/525 (52%), Gaps = 76/525 (14%)
Query: 18 DERDGQTPV-DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL 76
D R P+ + ++ + +L+ Q+ GL++L + NV+L DEMGLGKT+Q ++F+
Sbjct: 445 DTRSPHVPIREQPDYIMNGQLRDFQITGLNFLAYNWCKNKNVILADEMGLGKTVQTVAFM 504
Query: 77 SYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVK 136
++L + GP LV+ PL+ W + P L + Y G+ R+ IR YE +
Sbjct: 505 NWLHNDRGQEGPHLVVVPLTTIPAWADTFDNWAPSLNYVVYNGKESSRQIIRE--YELLV 562
Query: 137 EQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREH 196
+ N F+VLLT+Y+ +L D FLSQI W + +DEA RLKN S LY L +
Sbjct: 563 D----GNPKRPKFNVLLTSYEYILADSLFLSQIKWQFMAVDEAHRLKNRESQLYLKLLD- 617
Query: 197 FLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKE 256
F P RLL+TGTP+QN L EL ALM F MP + T + A E
Sbjct: 618 FKAPSRLLITGTPVQNTLGELSALMDFLMPGELEIEDNMDLTDEAA------------GE 665
Query: 257 QFTSLKGILSAFMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKEL--- 307
+ +L + ++LRRTKQK+ LPP + E++ +Q Y +IL +
Sbjct: 666 KIAALTTKIQPYILRRTKQKVEND----LPPKSEKIIRVELSDVQLDYYKNILTRNYAAL 721
Query: 308 ------PKLLALS-----SRTANHQSLQNTA---------------------SGKLVVLD 335
PK L+ + +NH + A SGK+++LD
Sbjct: 722 NEGSKGPKQSLLNIMMELKKASNHPYMFPNAEEKILKGSERRDDQLKGLIASSGKMMLLD 781
Query: 336 LLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQS 395
LL KL HRVL+F+QM + LDIL D+L+LR Y ++RLDG++ A R AI HF+
Sbjct: 782 RLLAKLKKDNHRVLIFSQMVKMLDILGDYLQLRGYQFQRLDGTVAAGPRRQAIDHFN--- 838
Query: 396 AIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQ 455
A G++ F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ
Sbjct: 839 --------ADGSNDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQ 890
Query: 456 MNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
V V++ TVEE I+ RA KL L + V D+E KE
Sbjct: 891 KKPVSIYRFVSKETVEEEILERARNKLMLEFITIQRGVTDKEKKE 935
>gi|195428619|ref|XP_002062369.1| GK17504 [Drosophila willistoni]
gi|194158454|gb|EDW73355.1| GK17504 [Drosophila willistoni]
Length = 2023
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 189/499 (37%), Positives = 264/499 (52%), Gaps = 71/499 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L P+Q+EG++WL + G++ +L DEMGLGKT+Q ++FL L GPFLV PL
Sbjct: 740 QLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPL 799
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL-----PFD 150
S W E + P + Y+G+++ R IR + + + VS L F+
Sbjct: 800 STLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGTKVSRLRTTQYKFN 859
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+TGTP+
Sbjct: 860 VLLTSYELISMDAPCLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YTIAYKLLLTGTPL 918
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL+ L++F F L F F D +EQ L +L ML
Sbjct: 919 QNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLGPHML 968
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS--------- 315
RR K +++ +P +E V +QKK Y IL K L + S
Sbjct: 969 RRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINI 1024
Query: 316 -----RTANHQSL--------------------QNTASGKLVVLDLLLKKLYNSGHRVLL 350
+ NH L A+GKLV+L +LK+L + HRVL+
Sbjct: 1025 MMDLKKCCNHPYLFPSAAEEALTSAGGLYEINSLTKAAGKLVLLSKMLKQLKSQNHRVLI 1084
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LDIL+DFLE +Y YER+DGSI A+R Q AI+R A G F
Sbjct: 1085 FSQMTKMLDILEDFLEGEQYKYERIDGSIT-----GAVR----QEAIDRF--NAPGAQQF 1133
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT ++V
Sbjct: 1134 VFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSV 1193
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE + + A+RK+ L+H VV
Sbjct: 1194 EERVTQVAKRKMMLTHLVV 1212
>gi|425774446|gb|EKV12753.1| hypothetical protein PDIG_41890 [Penicillium digitatum PHI26]
gi|425783636|gb|EKV21476.1| hypothetical protein PDIP_06170 [Penicillium digitatum Pd1]
Length = 1494
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 210/582 (36%), Positives = 297/582 (51%), Gaps = 87/582 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+GL++L ++ G NV+L DEMGLGKT+Q +SF+++++ + GPF+
Sbjct: 426 FLQNGELKDFQVKGLNFLAFNWVRGRNVVLADEMGLGKTVQTVSFINWMRHVRRQQGPFI 485
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W +TP L + Y G + R +R YE + + N F
Sbjct: 486 VIVPLSTMPAWADTFDHWTPDLNYVVYNGSEKARSVLRD--YELMVD----GNPKRPKFH 539
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLTTY+ + D FL Q W + +DEA RLKN S LY L E + RLL+TGTPI
Sbjct: 540 VLLTTYEYAMNDSPFLGQFKWQFMAVDEAHRLKNRDSQLYIKLFE-WKCQARLLITGTPI 598
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL+EL ALM F P + + D +S A ++ L + +ML
Sbjct: 599 QNNLAELSALMDFLNPGL-------IDVDADMDLNSEA-----ASQKLAELTNAIQPYML 646
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKEL----------------- 307
RRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 647 RRTKSK-VESD---LPPKTEKIIRVELSDVQLEYYKNILTKNYAALNDGNKGMKQSLLNI 702
Query: 308 ------------------PKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
K+L SSR + T+SGK+++LD LL+KL GHRVL
Sbjct: 703 MMELKKASNHPFMFPNAEAKILEGSSRREDILRAMITSSGKMMLLDQLLRKLSVDGHRVL 762
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F QM L+IL +++E R Y Y+RLDG+I + R AI H++ A G+
Sbjct: 763 IFCQMVGMLNILSEYMEYRGYKYQRLDGTIPSAARRLAIEHYN-----------APGSTD 811
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV++ T
Sbjct: 812 FAFLLSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTRPVSVYRLVSKDT 871
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREVKE------RTAVE---TDDLRSII--FGLHL 518
+EE ++ RA KL L + V D+E E R E TDD+ I+ G +
Sbjct: 872 IEEEVIERARNKLLLEFITIQRGVTDKEASEMQNKMARVVAEPNSTDDISRILKRRGQKM 931
Query: 519 FDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKF 560
F+ + N ++ + L + + + E EQ+ G +F
Sbjct: 932 FE-QTDNQKKLEQLDIDSVLANAELHQTEEAEQIQADGGEEF 972
>gi|302915751|ref|XP_003051686.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria
haematococca mpVI 77-13-4]
gi|256732625|gb|EEU45973.1| SNF2 family chromodomain-helicase DNA-binding protein [Nectria
haematococca mpVI 77-13-4]
Length = 1557
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 195/507 (38%), Positives = 275/507 (54%), Gaps = 74/507 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
++ V EL+ Q+ GL++L + G NV+L DEMGLGKT+Q +SFLS+L+ ++ GP
Sbjct: 451 DYIVGGELRSFQLRGLNFLCLNWCRGNNVILADEMGLGKTVQTVSFLSWLRNARHQEGPS 510
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
LV+ PLSV W ++P L + Y+G + R IR EH E +N F
Sbjct: 511 LVVAPLSVIPAWCDTFNTWSPDLNYVVYLGPEDARNIIR----EH--ELLVDNNPKKPKF 564
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
++L+T+Y+ +L D FL I W +DEA RLKN S LY+ L F +P ++L+TGTP
Sbjct: 565 NILVTSYEFILQDWQFLQSIKWQTLAVDEAHRLKNRESQLYSRLVS-FGIPCKVLITGTP 623
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
IQNNL+EL AL+ F P D++ ++ A +E+ L ++ F+
Sbjct: 624 IQNNLAELSALLDFLNPGKVAIDEDL-----DSLSANDA------QEKLQQLHKAIAPFI 672
Query: 270 LRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRK------------------ 305
LRRTK+ VE LPP TE ++ +Q Y +IL +
Sbjct: 673 LRRTKE-TVESD---LPPKTEKIIRVELSDVQLDYYKNILTRNYTALCDATNGHKNSLLN 728
Query: 306 ---ELPKL--------------LALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRV 348
EL K+ LA S R + +SGK+++LD LL KL GHRV
Sbjct: 729 IMMELKKISNHPYMFPGAEEKVLAGSVRREDQIKGLIASSGKMMLLDQLLSKLKKDGHRV 788
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL D+L LR Y ++RLDG+I A R AI HF+ A +D
Sbjct: 789 LIFSQMVKMLDILGDYLSLRGYKFQRLDGTIAAGPRRMAINHFN-----------ADDSD 837
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++
Sbjct: 838 DFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKRPVNIYRLVSKE 897
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVD 495
TVEE ++ RA KL L + + V D
Sbjct: 898 TVEEEVLERARNKLLLEYLTIQAGVTD 924
>gi|346321814|gb|EGX91413.1| chromodomain helicase (Chd1), putative [Cordyceps militaris CM01]
Length = 1657
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 196/506 (38%), Positives = 273/506 (53%), Gaps = 80/506 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
EL+P Q+ GL++L + G NV+L DEMGLGKT+Q +SFLS+L+ + GP LV+
Sbjct: 449 NGELRPFQLRGLNFLCLNWCRGNNVILADEMGLGKTVQTVSFLSWLRNCRKQEGPSLVVA 508
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
PLSV W ++P L + Y+G + R IR E N F+VL+
Sbjct: 509 PLSVIPAWCDTFNNWSPDLNYVVYLGPEDARSIIREN------ELLVDGNPKKPKFNVLV 562
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y+ +L D FL I + +DEA RLKN S LY L F +P ++L+TGTPIQNN
Sbjct: 563 TSYEFILQDWQFLQSIKFQCLAVDEAHRLKNAESQLYMRLL-GFGIPCKVLITGTPIQNN 621
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
LSEL AL+ F P +++ L +F DA +S E+ L ++ ++LRRT
Sbjct: 622 LSELAALLDFLNPGKV-KIDEDLESF-DANDAS---------EKLQELHSAIAPYILRRT 670
Query: 274 KQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRTANHQ-SLQN- 325
K+ VE LPP T E++ +Q Y +IL + ALS ++ H+ SL N
Sbjct: 671 KE-TVESD---LPPKTEKIIRVELSDVQLDYYKNILTR---NYAALSDASSGHKNSLLNI 723
Query: 326 ------------------------------------TASGKLVVLDLLLKKLYNSGHRVL 349
T+SGK+++LD LL KL GHRVL
Sbjct: 724 MMELKKISNHPYMFPGAEERVLAGSVRREDLIKGLVTSSGKMMLLDQLLSKLKKDGHRVL 783
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D++ LR Y ++RLDG+I A R AI HF+ A +D
Sbjct: 784 IFSQMVRMLDILGDYMSLRGYKFQRLDGTIAAGPRRMAINHFN-----------ADDSDD 832
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V LV++ T
Sbjct: 833 FCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKRPVNIYRLVSKET 892
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD 495
VEE ++ RA KL L + + V D
Sbjct: 893 VEEEVLERARNKLLLEYLTIQAGVTD 918
>gi|66826589|ref|XP_646649.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
gi|60474939|gb|EAL72876.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
Length = 3247
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 182/494 (36%), Positives = 270/494 (54%), Gaps = 66/494 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LKP+Q++GL W++ Y +N +L DEMGLGKT+Q I+ +SYL + + GPFLV+ P
Sbjct: 1709 GKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSYLIEVKKNNGPFLVVVP 1768
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W E +K+ PK++ + Y G++ R++ +E ++P F+ ++T
Sbjct: 1769 LSTLSNWGQEFSKWAPKVKRVLYYGDKP----ARKSKFEEF--------IAPGQFNAVVT 1816
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ ++ D+ LS+I W Y I+DE R+KN +S L +L + RLL+TGTP+QN+L
Sbjct: 1817 TYEYIIKDKNALSKIKWNYLIVDEGHRMKNYTSKLSIILGTSYSSRYRLLLTGTPLQNSL 1876
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF---TSLKGILSAFMLR 271
ELWAL++F +P++F + F F + +EQ L +L F+LR
Sbjct: 1877 PELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGEKIEMNEEEQLLIIQRLHKVLRPFLLR 1936
Query: 272 RTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTAN---HQS 322
R K K VE LP E ++ Q K+Y I K + KL + N +
Sbjct: 1937 RLK-KEVEA---QLPDKVEKVLKCDMSAFQAKMYDLIKTKGVSKLASSGGADGNPKLAKG 1992
Query: 323 LQNT---------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
L+NT +GK +LD LL KL +GHRVL+F+QMT
Sbjct: 1993 LKNTYVQLRKICNHPYLFYDDEYNIDDNLIRYAGKFDLLDRLLPKLKAAGHRVLIFSQMT 2052
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
Q ++IL+ F + Y + RLDGS +++ER + F+ A ++ F+F++S
Sbjct: 2053 QLINILEVFFAYKDYKFLRLDGSTKSDERGHLLELFN-----------APNSEYFIFVLS 2101
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+GLNL ADTVI ++ DWNPQ+D QA RAHRIGQ V + LVT H+VEE I+
Sbjct: 2102 TRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVRVLRLVTAHSVEESIL 2161
Query: 476 RRAERKLRLSHNVV 489
RA K L ++
Sbjct: 2162 ARANFKKELDKKII 2175
>gi|380493148|emb|CCF34089.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1452
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 276/535 (51%), Gaps = 79/535 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A V LK +QV+GL W+I Y +N +L DEMGLGKT+Q IS ++YL +
Sbjct: 545 TEQANMLVGGRLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLVTYLIERKKQ 604
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E K+ P + + Y G R+ Q +
Sbjct: 605 EGPYLVIVPLSTLTNWTLEFEKWAPSVSKIVYKGPPLARKQ-------------QQDKIR 651
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L + +++++ RL++
Sbjct: 652 QGRFQVLLTTYEYIIKDRPVLSKIKWFHMIIDEGHRMKNQNSKLTSTIQQYYHTRFRLIL 711
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNL+ELWA+++F +P++F + F F ++ + + E+
Sbjct: 712 TGTPLQNNLTELWAMLNFTLPTIFKSAKTFDEWFNTPFANTGGQDKMDLTEEEQILVIRR 771
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASI------------ 302
L +L F+LRR K+ + + LP TE + LQ K+Y +
Sbjct: 772 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQSKLYKQMVTHNKILVSDGQ 827
Query: 303 ---------------LRK--ELPKLLALSSRTANHQSLQNT----ASGKLVVLDLLLKKL 341
LRK P + T N S+ N +GK +LD +L K
Sbjct: 828 GGKAGARGLSNMIMQLRKLCNHPFVFDEVENTMNPMSISNDLLWRTAGKFELLDRVLPKY 887
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+GHRVL+F QMT +DI++D+L R Y RLDG+ +++ER +R F+
Sbjct: 888 KATGHRVLMFFQMTAIMDIMEDYLRYRNMKYLRLDGTTKSDERSDLLREFN--------- 938
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
A +D F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 939 --APNSDYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 996
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+ L++ ++VEE I+ RA KL + V+ DR+ RT +E+ DL
Sbjct: 997 LRLISSNSVEEKILERARYKLDMDGKVIQAGRFDNKSTETDRDAMLRTLLESADL 1051
>gi|224110590|ref|XP_002315568.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222864608|gb|EEF01739.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1050
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 196/547 (35%), Positives = 300/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS + YL+ + GP +V+
Sbjct: 179 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLQEFRGITGPHMVV 238
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G ++R++IR + ++ FDV
Sbjct: 239 APKSTLGNWMNEIRRFCPVLRAVKFLGNPDERKHIREEL------------LAAGKFDVC 286
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 287 VTSFEMAIKEKSTLRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYNTNYRLLITGTPLQN 345
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 346 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 398
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 399 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQL 454
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L T +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 455 RKCCNHPYLFQGAEPGPPYSTGDHLVTNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 514
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ F F++STRAG
Sbjct: 515 ILEDYLMFRGYLYCRIDGNTGGEDRDASIDAFN-----------KPGSEKFCFLLSTRAG 563
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 564 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 623
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ FG + F K I +E+ D +
Sbjct: 624 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 679
Query: 536 GLNSMVE 542
G + E
Sbjct: 680 GEEATAE 686
>gi|395831556|ref|XP_003788863.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Otolemur
garnettii]
Length = 1790
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 183/470 (38%), Positives = 264/470 (56%), Gaps = 68/470 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V + L+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVSAERLL 916
>gi|413917662|gb|AFW57594.1| hypothetical protein ZEAMMB73_374331 [Zea mays]
Length = 585
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 182/506 (35%), Positives = 276/506 (54%), Gaps = 61/506 (12%)
Query: 14 IHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAI 73
+H +E+ + P A E G EL+P+Q+EGL W++ + +N +L DEMGLGKT+Q I
Sbjct: 97 VHSIEEKVTEQP-SALEGG---ELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTI 152
Query: 74 SFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE 133
+ ++YL ++ GP L++ P +V W +E + P + + Y G E+R+ +R
Sbjct: 153 ALIAYLLENKEVAGPHLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPEERKLLRE---- 208
Query: 134 HVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
N L F+VLLT YD++L D+ FL ++ W Y I+DE RLKN L L
Sbjct: 209 --------KNFDGLQFNVLLTHYDLILKDKKFLKKVHWHYLIVDEGHRLKNHECALARTL 260
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGK 253
+ + RRLL+TGTPIQN+L ELW+L++F +P++F + F F + +
Sbjct: 261 VSGYQIRRRLLLTGTPIQNSLQELWSLLNFILPNIFNSSQNFEEWFNAPFACDVSLNDEE 320
Query: 254 IKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKEL 307
L +L F+LRR K ++ + LP T++ + QK Y + +E
Sbjct: 321 QLLIIHRLHQVLRPFLLRRKKDEVEK----YLPVKTQVILKCDMSAWQKAYYEQVTSREK 376
Query: 308 PKL-LALSSRTANHQSLQ-----------------------NTASGKLVVLDLLLKKLYN 343
L L S+ + S+Q ASGK +LD LL KL
Sbjct: 377 VALGFGLRSKALQNLSMQLRKCCNHPYLFVEHYNMYQREEIVRASGKFELLDRLLPKLQR 436
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
+GHRVLLF+QMT+ LD+L+ +L++ + Y RLDGS + EER + F+ + +
Sbjct: 437 AGHRVLLFSQMTKLLDVLEIYLQMYNFKYMRLDGSTKTEERGRLLADFNKKDS------- 489
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
+ F+F++STRAGG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ N V
Sbjct: 490 ----EYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKNEVRVFV 545
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVV 489
LV+ ++EE I+ RA++K+ + V+
Sbjct: 546 LVSVGSIEEEILDRAKQKMGIDAKVI 571
>gi|341890749|gb|EGT46684.1| hypothetical protein CAEBREN_05565 [Caenorhabditis brenneri]
Length = 1728
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 185/505 (36%), Positives = 267/505 (52%), Gaps = 71/505 (14%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
++ L P+Q+EG++WL + G + +L DEMGLGKT+Q+++FL L S GPF
Sbjct: 583 DYVTGGTLHPYQLEGINWLRHCWSTGTDAILADEMGLGKTIQSLTFLYSLMKEGHSMGPF 642
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ------SQMSN 143
L+ PLS W E ++ P V+ Y G E R IR + ++ S++ N
Sbjct: 643 LIAAPLSTIRNWEREAEQWCPDFYVITYTGNAESREVIRDNEFSFAEKAVRAGKLSRIRN 702
Query: 144 VSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRL 203
+ L F VLLT+Y+++ D+ LS I W ++DEA RLKN S+ + L + + RL
Sbjct: 703 QNSLKFHVLLTSYEIINNDKAILSSINWDALVVDEAHRLKNNESLFFKNLLD-YRFSYRL 761
Query: 204 LMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
L+TGTP+QNNL EL+ L++F P F L TFK + S ++Q L
Sbjct: 762 LLTGTPLQNNLDELFHLLNFLSPDRFNEL----ETFKAELSEISK------EDQINKLHA 811
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE----------- 306
+L MLRR K ++ +P +E+ V +QK Y +IL +
Sbjct: 812 LLGPHMLRRLKADVL----TGMPTKSELIVRVELSPMQKTYYKNILTRNFEALNVKNGAQ 867
Query: 307 --LPKLLALSSRTANHQSLQNTAS--------------------GKLVVLDLLLKKLYNS 344
L +L + NH L AS GK ++L +++KL +
Sbjct: 868 VSLNNILVELKKCCNHPYLFAKASIEAPKRQDSYYEGEDLIKNSGKFILLQKMMRKLKDG 927
Query: 345 GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEA 404
GHRVL+F+QMT LDIL+DF Y +ER+DG+I E+R AI F+ +
Sbjct: 928 GHRVLIFSQMTMMLDILEDFCHNEDYQFERIDGNITGEKRQEAIDRFNDPES-------- 979
Query: 405 GGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINL 464
AFVF++STRAGG+G+NL ADTVI Y+ DWNP D QAL RAHR+GQ N V+
Sbjct: 980 ---QAFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDTQALSRAHRLGQKNKVMIYRF 1036
Query: 465 VTEHTVEEVIMRRAERKLRLSHNVV 489
VT+++VEE I A++K+ L+H VV
Sbjct: 1037 VTKNSVEERITSVAKKKMLLTHLVV 1061
>gi|323337858|gb|EGA79098.1| Chd1p [Saccharomyces cerevisiae Vin13]
Length = 1329
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 182/506 (35%), Positives = 278/506 (54%), Gaps = 74/506 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + G N +L DEMGLGKT+Q ++F+S+L F++ GP +++ P
Sbjct: 374 GELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVP 433
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W+ K+ P L + Y+G ++ R IR YE + + F+VLLT
Sbjct: 434 LSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIRE--YEFYT-NPRAKGXKTMKFNVLLT 490
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L I W + +DEA RLKN S LY L F + R+L+TGTP+QNN+
Sbjct: 491 TYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNS-FKVANRMLITGTPLQNNI 549
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL++F MP F T++Q + F++ +E L + F+LRR K
Sbjct: 550 KELAALVNFLMPGRF-TIDQEID-FENQDEEQ--------EEYIHDLHRRIQPFILRRLK 599
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 600 KDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNEL 655
Query: 315 SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L + A SGK+V+LD LL +L GHRVL
Sbjct: 656 KKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVL 715
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + ND
Sbjct: 716 IFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS----------ND- 764
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++ T
Sbjct: 765 FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDT 824
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD 495
VEE ++ RA +K+ L + ++ V D
Sbjct: 825 VEEEVLERARKKMILEYAIISLGVTD 850
>gi|322707206|gb|EFY98785.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Metarhizium anisopliae ARSEF 23]
Length = 1416
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 284/535 (53%), Gaps = 79/535 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL ++
Sbjct: 518 TEQASILVGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKLQ 577
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E K+ P + + Y G N R+ E +++
Sbjct: 578 SGPYLVIVPLSTLTNWNLEFEKWAPSISRIVYKGPP----NARKLQQEKIRQGR------ 627
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L ++++++ RL++
Sbjct: 628 ---FQVLLTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNSNSKLSATIQQYYVTRFRLIL 684
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNL+ELW++++F +P++F ++ F F ++ + ++ E+
Sbjct: 685 TGTPLQNNLAELWSMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMELTEEEQILVIRR 744
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR---------- 304
L +L F+LRR K+ + + LP TE + LQ K+Y ++
Sbjct: 745 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQAKLYKQMVTHNKLVVSDGK 800
Query: 305 ------KELPKLLALSSRTANH-------------QSLQNT----ASGKLVVLDLLLKKL 341
+ L ++ + NH S+ N +GK +LD +L K
Sbjct: 801 GGKTNARGLSNMIMQLRKLCNHPFVFDEVENVMNPMSISNDLLWRTAGKFELLDRILPKY 860
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+GHRVL+F QMT +DI++D+L RK+ Y RLDG+ +++ER ++ F+
Sbjct: 861 QATGHRVLMFFQMTAIMDIMEDYLRYRKFEYLRLDGTTKSDERSDLLKEFN--------- 911
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
A + F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 912 --APDSKYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 969
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+ L++ ++VEE I+ RA KL + V+ DR+ RT +E+ D+
Sbjct: 970 LRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLESADM 1024
>gi|356555543|ref|XP_003546090.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
isoform 1 [Glycine max]
Length = 1072
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 299/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 193 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIKGPHMVV 252
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G ++RR+IR + K FDV
Sbjct: 253 APKSTLGNWMNEIRRFCPVLRAIKFLGNPDERRHIRDELLVAGK------------FDVC 300
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 301 VTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYSTNYRLLITGTPLQN 359
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 360 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 412
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 413 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQL 468
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 469 RKCCNHPYLFQGAEPGPPFTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 528
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ ++R A+I F+ G++ FVF++STRAG
Sbjct: 529 ILEDYLMFRGYQYCRIDGNTGGDDRDASIDAFN-----------KPGSEKFVFLLSTRAG 577
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 578 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 637
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ FG + F K I +E+ D +
Sbjct: 638 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 693
Query: 536 GLNSMVE 542
G + E
Sbjct: 694 GEEATAE 700
>gi|46125449|ref|XP_387278.1| hypothetical protein FG07102.1 [Gibberella zeae PH-1]
Length = 1627
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 193/509 (37%), Positives = 278/509 (54%), Gaps = 78/509 (15%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F EL+ Q+ GL++L + G NV+L DEMGLGKT+Q +SFLS+L+ ++ GP
Sbjct: 445 DFIKNGELRNFQLRGLNFLCLNWTKGNNVILADEMGLGKTVQTVSFLSWLRNARQQEGPS 504
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL-- 147
LV+ PLSV W ++P L + Y+G E RNI ++E + + +P
Sbjct: 505 LVVAPLSVIPAWCDTFNHWSPDLNYVVYLGP-EDARNI-------IREHELLVDGNPKKP 556
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
F++L+T+Y+ +L D FL I W +DEA RLKN S LYN L +F +P ++L+TG
Sbjct: 557 KFNILVTSYEFILQDWQFLQSIKWQTLAVDEAHRLKNRESQLYNRL-VNFGIPCKVLITG 615
Query: 208 TPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSA 267
TPIQNNL+EL AL+ F P +++ L D++ ++ A +E+ L ++
Sbjct: 616 TPIQNNLAELSALLDFLNPGKV-DIDEDL----DSLSANDA------QEKLQQLHKAIAP 664
Query: 268 FMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELP------------- 308
++LRRTK+ VE LPP T E++ +Q Y +IL +
Sbjct: 665 YILRRTKE-TVESD---LPPKTEKIIRVELSDVQLDYYKNILTRNYSALCDATNGHKNSL 720
Query: 309 ----------------------KLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGH 346
K+LA S R + +SGK+++LD LL KL GH
Sbjct: 721 LNIMMELKKISNHPYMFPGAEEKVLAGSVRREDQIKGLIASSGKMMLLDQLLSKLNKDGH 780
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDIL D+ LR Y ++RLDG+I A R AI HF+ A
Sbjct: 781 RVLIFSQMVKMLDILGDYCSLRGYKFQRLDGTIAAGPRRMAINHFN-----------ADD 829
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+D F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV+
Sbjct: 830 SDDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKRPVNIYRLVS 889
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVD 495
+ TVEE ++ RA KL L + + V D
Sbjct: 890 KETVEEEVLERARNKLLLEYLTIQAGVTD 918
>gi|353233022|emb|CCD80377.1| putative helicase [Schistosoma mansoni]
Length = 1087
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 206/547 (37%), Positives = 289/547 (52%), Gaps = 103/547 (18%)
Query: 29 AEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPG 87
EFG+T ++ +Q++G++WLI G LL DEMGLGKT Q I F+ + + S
Sbjct: 24 VEFGLTGIVIREYQLQGINWLINCDSQGHGGLLCDEMGLGKTCQVICFILAVS-NWKSNS 82
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL 147
FL++CPLSV + W E+ P + + Y+G++ R N+R + +K
Sbjct: 83 TFLIVCPLSVIENWRCELQNIAPNISFMTYIGDKVARHNLRSDYNKSIK----------- 131
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR-RLLMT 206
VLLTTY++ + D+ F + W Y I+DE RLKN ++ +Y +L E P R ++T
Sbjct: 132 ---VLLTTYEICINDEAFFKTVYWNYVIVDEGHRLKNSNTQIYAMLNE--TCPGIRFILT 186
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTPIQNNL EL+ L+HF P+ F STF + + S+ K Q + IL
Sbjct: 187 GTPIQNNLEELYNLLHFISPNYFHK--NLCSTFINYFNHSN-------KNQ--DMAKILR 235
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKE-------------- 306
F+LRR KQ ++ LPP +I T LQ K+Y +L +
Sbjct: 236 PFLLRRIKQNVLT----DLPPRADILIYHSLTGLQTKIYRVLLTRNADLFQSITDQQNNL 291
Query: 307 -----LPKLLALSSRTANHQSLQN--------------TASGKLVVLDLLLKKLYNSG-- 345
L L+ + NH L + AS KL +LDLLL+ LYN
Sbjct: 292 RIQNRLQNLIVNLRKCVNHPYLFDGVEPEPFTLGEHLVQASSKLFLLDLLLQFLYNPNNS 351
Query: 346 --------------HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHF 391
H+VL+F+QMT+ LDI+QD+L LR YSYERLDGS+R E+RF A++ F
Sbjct: 352 QLDKSFYSSKSKPVHKVLIFSQMTRMLDIIQDYLTLRGYSYERLDGSVRGEDRFQAVKSF 411
Query: 392 SVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAH 451
+ + FVF++STRAGG GLNLV+ADTVIF + D+NPQ+D QA RAH
Sbjct: 412 NEDQ------------ETFVFLLSTRAGGQGLNLVSADTVIFVDSDFNPQIDVQAAGRAH 459
Query: 452 RIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG-DDVVDREVKERTAVETDDLR 510
RIGQ V + LV HTVEE I+ RAE KL+L+ V+ D+ + E D+L
Sbjct: 460 RIGQKKPVRIVRLVCRHTVEEAILSRAENKLKLATRVLNTTDLNNLENNTDKPFTFDELN 519
Query: 511 SII-FGL 516
+++ FGL
Sbjct: 520 NVLKFGL 526
>gi|405972247|gb|EKC37026.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Crassostrea gigas]
Length = 2123
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 185/502 (36%), Positives = 262/502 (52%), Gaps = 78/502 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L P+Q+EG++WL + G + +L DEMGLGKT+Q I FL L S GPFLV PLS
Sbjct: 680 LHPYQLEGVNWLRYSWSNGTDTILADEMGLGKTIQTIVFLQSLYQEGHSKGPFLVSAPLS 739
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVK-------EQSQMSNVSPLPF 149
W E + P L V+ Y+G+++ R IR + + + S++ + + F
Sbjct: 740 TIINWEREFEFWAPDLYVVTYIGDKDCRSVIREHEFSFEENAIRSGAKASKLKSDCQVKF 799
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
VLLT+Y+++ +D L + W ++DEA RLKN S + +L ++ + +LL+TGTP
Sbjct: 800 HVLLTSYELISIDSACLGSVDWAVLVVDEAHRLKNNQSKFFRIL-SNYKIGYKLLLTGTP 858
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL+ L++F P F L FL F D ++Q L +L +
Sbjct: 859 LQNNLEELFHLLNFLSPDKFNDLTVFLDEFADIAK----------EDQVKKLHDMLGPHL 908
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSL 323
LRR K +++ +P +E V +QKK Y IL + AL+S+ N SL
Sbjct: 909 LRRLKADVLKG----MPSKSEFIVRVELSPMQKKYYKYILTRNFD---ALNSKGGNQVSL 961
Query: 324 QN------------------------------------TASGKLVVLDLLLKKLYNSGHR 347
N A GKL +L ++KKL GHR
Sbjct: 962 LNIMMDLKKCCNHPYLFPTASNDAPKLPNGMYEGTAMTKACGKLELLSNMMKKLKEKGHR 1021
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
+L+F+QMT+ LDIL+DFLE Y YER+DG I R AI F+ A +
Sbjct: 1022 LLIFSQMTKMLDILEDFLEYEGYKYERIDGGITGSMRQDAIDRFNAPDAPQ--------- 1072
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 1073 --FAFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTR 1130
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
++VEE I + A++K+ L+H VV
Sbjct: 1131 NSVEERITQVAKKKMMLTHLVV 1152
>gi|414590807|tpg|DAA41378.1| TPA: hypothetical protein ZEAMMB73_390417 [Zea mays]
Length = 917
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 184/506 (36%), Positives = 279/506 (55%), Gaps = 61/506 (12%)
Query: 14 IHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAI 73
+H +E+ + P A E G EL+P+Q+EGL W++ + +N +L DEMGLGKT+Q I
Sbjct: 209 VHSIEEKVTEQP-SALEGG---ELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTI 264
Query: 74 SFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE 133
+ ++YL + GP L++ P +V W +E + P + + Y G E+RR +R
Sbjct: 265 ALIAYLLEKKEVAGPHLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPEERRLLRD---- 320
Query: 134 HVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
N F+VLLT YD++L D+ FL ++ W Y I+DE RLKN L L
Sbjct: 321 --------KNFDGEQFNVLLTHYDLILKDKKFLKKVHWHYLIVDEGHRLKNHECALARTL 372
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGK 253
+++ RRLL+TGTPIQN+L ELW+L++F +P++F + F F + +
Sbjct: 373 VSGYMIRRRLLLTGTPIQNSLQELWSLLNFILPNIFNSSQNFEEWFNAPFACDVSLNDEE 432
Query: 254 IKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASI----- 302
L +L F+LRR K ++ + LP T++ + QK Y +
Sbjct: 433 QLLIIHRLHQVLRPFLLRRKKDEVEK----YLPVKTQVILKCDMSAWQKAYYEQVTSREK 488
Query: 303 ------LRKELPKLLALSSR-TANHQSL----QNT--------ASGKLVVLDLLLKKLYN 343
+RK+ + L++ R NH L N ASGK +LD LL KL
Sbjct: 489 VALGYGIRKKALQNLSMQLRKCCNHPYLFVEHYNMYQREEIVRASGKFELLDRLLPKLQR 548
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
+GHRVLLF+QMT+ LD+L+ +L++ + Y RLDGS + EER + F+ +++
Sbjct: 549 AGHRVLLFSQMTKLLDVLEIYLQMYNFKYMRLDGSTKTEERGRLLADFNKKNS------- 601
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
+ F+F++STRAGG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ N V
Sbjct: 602 ----EYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKNEVRVFV 657
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVV 489
LV+ ++EE I+ RA++K+ + V+
Sbjct: 658 LVSVGSIEEEILDRAKQKMGIDAKVI 683
>gi|242089493|ref|XP_002440579.1| hypothetical protein SORBIDRAFT_09g003430 [Sorghum bicolor]
gi|241945864|gb|EES19009.1| hypothetical protein SORBIDRAFT_09g003430 [Sorghum bicolor]
Length = 1127
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 182/506 (35%), Positives = 275/506 (54%), Gaps = 61/506 (12%)
Query: 14 IHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAI 73
+H +E+ + P A E G EL+P+Q+EGL W++ + +N +L DEMGLGKT+Q I
Sbjct: 421 VHSIEEKVTEQP-SALEGG---ELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTI 476
Query: 74 SFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE 133
+ ++YL + GP L++ P +V W +E + P + + Y G E+R+ +R
Sbjct: 477 ALIAYLLEKKEVAGPHLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPEERKLLRE---- 532
Query: 134 HVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
N L F+VLLT YD++L D+ FL ++ W Y I+DE RLKN L L
Sbjct: 533 --------KNFDGLQFNVLLTHYDLILKDKKFLKKVNWHYLIVDEGHRLKNHECALARTL 584
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGK 253
+ + RRLL+TGTPIQN+L ELW+L++F +P++F + F F + +
Sbjct: 585 VSGYQIRRRLLLTGTPIQNSLQELWSLLNFILPNIFNSSQNFEEWFNAPFACDVSLNDEE 644
Query: 254 IKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKEL 307
L +L F+LRR K ++ + LP T++ + QK Y + +E
Sbjct: 645 QLLIIHRLHQVLRPFLLRRKKDEVEK----YLPVKTQVILKCDMSAWQKAYYEQVTSREK 700
Query: 308 PKL-LALSSRTANHQSLQ-----------------------NTASGKLVVLDLLLKKLYN 343
L L S+ + S+Q ASGK +LD LL KL
Sbjct: 701 VALGSGLRSKALQNLSMQLRKCCNHPYLFVEHYNMYQREEIVRASGKFELLDRLLPKLQR 760
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
+GHRVLLF+QMT+ LD+L+ +L++ + Y RLDGS + EER + F+ + +
Sbjct: 761 AGHRVLLFSQMTKLLDVLEVYLQMYNFKYMRLDGSTKTEERGRLLADFNKKDS------- 813
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
+ F+F++STRAGG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ N V
Sbjct: 814 ----EYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKNEVRVFV 869
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVV 489
LV+ ++EE I+ RA++K+ + V+
Sbjct: 870 LVSVGSIEEEILDRAKQKMGIDAKVI 895
>gi|344304707|gb|EGW34939.1| transcriptional regulator [Spathaspora passalidarum NRRL Y-27907]
Length = 1410
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 199/561 (35%), Positives = 292/561 (52%), Gaps = 79/561 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q ISFLS+L +++ GP L
Sbjct: 351 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTIQTISFLSWLIYARRQNGPHL 410
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W + P++ + Y+G E R+ IR YE N P F+
Sbjct: 411 VVVPLSTMPAWQETFELWAPEVNCVYYLGNGEARKTIRE--YEWY-----TPNGKP-KFN 462
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLTTY+ +L D+ L I W + +DEA RLKN S LY L+ F + RLL+TGTP+
Sbjct: 463 VLLTTYEYILKDRNELGSIKWQFLAVDEAHRLKNSESSLYESLK-GFKVANRLLITGTPL 521
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL +L +F MP F + S A + IK+ L+ + F+L
Sbjct: 522 QNNLKELASLCNFLMPGKFNIEQEI------DFESPDAEQERYIKD----LQKKIQPFIL 571
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS---------- 314
RR K+ + + LP T E++ +Q Y +I+ K L A +
Sbjct: 572 RRLKKDVEKS----LPSKTERILRVELSDIQTDYYKNIITKNYAALNAGNKGSQISLLNI 627
Query: 315 ----SRTANHQSLQNTA-----------------------SGKLVVLDLLLKKLYNSGHR 347
+ +NH L + A SGK+V+L+ LL +L GHR
Sbjct: 628 MSELKKASNHPYLFDGAEERVLAKAGSASRENILRGMIMSSGKMVLLEQLLTRLKKEGHR 687
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D+L ++ Y ++RLDG I + +R +I HF+ A +
Sbjct: 688 VLIFSQMVRMLDILGDYLSIKGYQFQRLDGGIPSAQRRISIDHFN-----------APDS 736
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F+F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV V++
Sbjct: 737 KDFIFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVSK 796
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE-RTAVETDDLRSII-FGLHLFDPKAIN 525
TVEE I+ RA +K+ L + ++ + D K+ + + +L I+ FG + N
Sbjct: 797 DTVEEEILERARKKMILEYAIISLGITDANSKKTKNEPSSSELSQILKFGAGTMFKENDN 856
Query: 526 NEESDDLRLSGLNSMVEKVIA 546
++ +DL L + S E I
Sbjct: 857 QKKLEDLNLDDVLSHAEDHIT 877
>gi|356555545|ref|XP_003546091.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
isoform 2 [Glycine max]
Length = 1064
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 299/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIKGPHMVV 244
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G ++RR+IR + K FDV
Sbjct: 245 APKSTLGNWMNEIRRFCPVLRAIKFLGNPDERRHIRDELLVAGK------------FDVC 292
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 293 VTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYSTNYRLLITGTPLQN 351
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 352 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 404
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 405 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQL 460
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFQGAEPGPPFTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ ++R A+I F+ G++ FVF++STRAG
Sbjct: 521 ILEDYLMFRGYQYCRIDGNTGGDDRDASIDAFN-----------KPGSEKFVFLLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 629
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ FG + F K I +E+ D +
Sbjct: 630 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 685
Query: 536 GLNSMVE 542
G + E
Sbjct: 686 GEEATAE 692
>gi|387594113|gb|EIJ89137.1| transcription activator [Nematocida parisii ERTm3]
Length = 638
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 189/518 (36%), Positives = 279/518 (53%), Gaps = 82/518 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+T L+ +Q+EGL+WLI Y +N +L DEMGLGKTLQ IS L YL ++ + P L++
Sbjct: 66 ITGTLRHYQIEGLNWLINMYEKKINCILADEMGLGKTLQTISLLGYLYTTKKNKLPNLLI 125
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W +E KF P ++ + + R++I+ E + L +
Sbjct: 126 VPKSTLQNWKNEFKKFMPGIKTIIF---HCSRKDIKLKAKE----------LQELDYIAC 172
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP--RRLLMTGTPI 210
+TTY++ L + L + W Y +IDEA R+KN +VL V+R ++P RLL+TGTP+
Sbjct: 173 ITTYEMCLAGKSQLQTVDWQYIVIDEAHRIKNEQTVLSKVVR---IIPCTHRLLLTGTPL 229
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNN+ ELWAL++F P VF F DA SS+ G E L+ +L F+L
Sbjct: 230 QNNIHELWALLNFLAPEVFSDGEGF-----DAWVESSSNDTGN--ETVDKLRNLLGLFIL 282
Query: 271 RRTKQKLVECGHLMLP--------PLTEITVLQKKVYASILRKE------------LPKL 310
RR K + + +LP PLT+ +Q+K Y IL K+ L +
Sbjct: 283 RREKADVEKS---LLPKKIINLYSPLTD---MQRKWYKMILEKDAENVVNEGSKVQLMNI 336
Query: 311 LALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ + NH L + A SGKL++LD LL L G RVL+F+QMT
Sbjct: 337 VCQLRKCCNHPYLFDGAEPGPPYTTGEHIIENSGKLLMLDKLLVHLKQKGSRVLIFSQMT 396
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ R++ Y R+DGS E+R AI F+ ++ + F+F++S
Sbjct: 397 RMLDILEDYCNYRQHEYCRIDGSTSTEDRCEAIEEFNKPNS-----------EIFIFLLS 445
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AD VI Y+ DWNPQ+D QA RAHRIGQ V N ++E+T+EE I+
Sbjct: 446 TRAGGLGINLATADVVIVYDNDWNPQMDLQAQDRAHRIGQKKQVFVFNFLSENTIEEKIL 505
Query: 476 RRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KL+L + +V + K+ A+ ++L I+
Sbjct: 506 ERAMKKLKLD-----EIIVQNQKKKDNAISQNELLGIL 538
>gi|409080334|gb|EKM80694.1| hypothetical protein AGABI1DRAFT_37749 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1346
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 189/495 (38%), Positives = 268/495 (54%), Gaps = 75/495 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK Q+ GL+WL + G N +L DEMGLGKT+Q ++F+S+L GPFLV+ P
Sbjct: 293 GELKDFQLTGLNWLAYVWSNGDNGILADEMGLGKTVQTVAFISWLFHEMQQYGPFLVIVP 352
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W + + P + V+ Y+G R IR + ++ +M +VLLT
Sbjct: 353 LSTITAWQMQFNLWAPDINVITYIGTAPAREVIRTHEFGPSNKKLKM--------NVLLT 404
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++ L D L I W +DEA RLKN S LY LR F +LL+TGTP+QNN+
Sbjct: 405 TYELTLRDAKELVDIKWQLLAVDEAHRLKNSESQLYEALR-CFSAASKLLITGTPLQNNV 463
Query: 215 -SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+EL +LMHF MP F N+F DA H KIKE L L + MLRR
Sbjct: 464 RAELLSLMHFLMPDKFALTNEF--DLNDADHEE------KIKE----LHLQLESLMLRRL 511
Query: 274 KQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------ 315
K+ ++ LP +E ++ LQ Y +IL K L+ ++
Sbjct: 512 KRDVLTS----LPTKSERILRVEMSALQTHFYKNILTKNFAGLVKSANGNNNISLLNIAM 567
Query: 316 ---RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ ANH L + A SGK+V+LD LL +L GHRVL+F+QM
Sbjct: 568 ELKKAANHPYLFDGAETRSDSNEETLKGLVMNSGKMVLLDKLLARLRQDGHRVLIFSQMV 627
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL D++ LR Y ++RLDG + +E+R +I HF+ A G+ F F++S
Sbjct: 628 RMLDILSDYMSLRGYIHQRLDGMVASEQRKKSIAHFN-----------APGSPDFAFLLS 676
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL A+TVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE ++
Sbjct: 677 TRAGGLGINLETANTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSVYRFVSKDTMEEDVL 736
Query: 476 RRAERKLRLSHNVVG 490
RA++K+ L + ++
Sbjct: 737 ERAKKKMVLEYAIIN 751
>gi|213408777|ref|XP_002175159.1| chromodomain helicase hrp1 [Schizosaccharomyces japonicus yFS275]
gi|212003206|gb|EEB08866.1| chromodomain helicase hrp1 [Schizosaccharomyces japonicus yFS275]
Length = 1354
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 195/540 (36%), Positives = 290/540 (53%), Gaps = 80/540 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ GL+W+ + N +L DEMGLGKT+Q + FLSYL GPFL++ P
Sbjct: 332 GELRDFQLTGLNWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLIHQLKQHGPFLIVVP 391
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +A++ P + + Y G E R IR YE +N L F++LLT
Sbjct: 392 LSTVPAWQETLARWAPDINSICYTGNSEARTTIRD--YEFYVS----TNARKLKFNILLT 445
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L+ I W Y +DEA RLKN S LY L + F RLL+TGTP+QNNL
Sbjct: 446 TYEYILKDRQELNNIRWQYLAVDEAHRLKNSESSLYEALSQ-FRTANRLLITGTPLQNNL 504
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +L++F MP F ++ F+ + L+ L F+LRR K
Sbjct: 505 KELASLVNFLMPGRFYIRDEL--NFEQPNEEQ--------ERNIRDLQQRLHPFILRRLK 554
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------------- 315
+ + + LP TE ++ LQ ++Y +IL + L ++
Sbjct: 555 RDVEKS----LPSKTERILRVELSDLQTQLYKNILTRNYRALSGAAAGNAHVSLLNIVVE 610
Query: 316 --RTANHQSL------------QNT----------ASGKLVVLDLLLKKLYNSGHRVLLF 351
+ +NH L +NT SGK+V+LD LL++L GHRVL+F
Sbjct: 611 LKKASNHPYLFPGVQEKWMIGRKNTREDKLRGIVMNSGKMVLLDKLLQRLKQDGHRVLIF 670
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
QM + L+IL +++ LR Y+++RLDG+I A R AI HF+ + + FV
Sbjct: 671 TQMVKVLNILAEYMNLRGYNFQRLDGTIPAPVRRLAIDHFNSPDSPD-----------FV 719
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV +++ TVE
Sbjct: 720 FLLSTRAGGLGINLSTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFLSKDTVE 779
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDREVKERT-AVETDDLRSII-FGL-HLFDPKAINNEE 528
E I+ RA RK+ L + ++ V ++ ++ + + +L +I+ FG ++F KA +N++
Sbjct: 780 EDILERARRKMILEYAIISLGVTEKSKNSKSDKITSQELNAILKFGASNMF--KANDNQQ 837
>gi|320582108|gb|EFW96326.1| chromatin remodelling complex ATPase chain ISW1 [Ogataea
parapolymorpha DL-1]
Length = 1033
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 178/494 (36%), Positives = 264/494 (53%), Gaps = 71/494 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q++GL+WLI ++ +L DEMGLGKTLQ I+FL YL++ + GP LV+
Sbjct: 140 INGKLRPYQIQGLNWLISLNQNNLSGILADEMGLGKTLQTIAFLGYLRYIKGIAGPHLVI 199
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W E K+TP++E L G+++QR I + + FDV+
Sbjct: 200 VPKSTLENWQREFTKWTPEVETLVLTGDQQQRNEIIK------------DGLMTCKFDVV 247
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+++Y++V+ ++ L + W Y ++DEA RLKN S+L ++R F RLL+TGTP+QN
Sbjct: 248 ISSYEIVIREKTALKKFAWEYIVVDEAHRLKNEDSLLSQIIRT-FHSRNRLLITGTPLQN 306
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF F F SS K + L +L F+LRR
Sbjct: 307 NLHELWALLNFLLPDVFADSETFDDWF------SSGDSENKDETIVNQLHKVLQPFLLRR 360
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K + + L P E+ V +QKK Y +L +++ +LL +
Sbjct: 361 IKSDVEKN----LLPKKELNVYVGMTEMQKKWYQKLLERDIDAVNGANGKRESKTRLLNI 416
Query: 314 S---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NH L A S K+ VLD +LK+ G RVL+F+QM+
Sbjct: 417 VMQLRKCCNHPYLFEGAEPGPPYTTDEHLIYNSQKMKVLDKMLKRFKEQGSRVLIFSQMS 476
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ R + Y R+DG +R AI +S A + FVF+++
Sbjct: 477 RMLDILEDYCSFRGFEYCRIDGQTDHVDRIRAIDEYS-----------APDSKKFVFLLT 525
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +AD V Y+ DWNPQ D QA+ RAHRIGQ V VT+ +EE ++
Sbjct: 526 TRAGGLGINLTSADIVFLYDSDWNPQADLQAMDRAHRIGQTKQVKVFRFVTQKAIEEKVL 585
Query: 476 RRAERKLRLSHNVV 489
RA +KLRL V+
Sbjct: 586 ERASQKLRLDQLVI 599
>gi|197101878|ref|NP_001127206.1| probable global transcription activator SNF2L1 [Pongo abelii]
gi|55726189|emb|CAH89868.1| hypothetical protein [Pongo abelii]
Length = 849
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 184/463 (39%), Positives = 252/463 (54%), Gaps = 74/463 (15%)
Query: 64 MGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQ 123
MGLGKTLQ I+ L YLK + PGP +VL P S W++E ++ P L V+ +VG+++
Sbjct: 1 MGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDA 60
Query: 124 RRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLK 183
R R + P +DV +T+Y++V+ ++ + W Y +IDEA R+K
Sbjct: 61 RAAFIR------------DEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIK 108
Query: 184 NPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTF--KD 241
N S L ++RE F RLL+TGTP+QNNL ELWAL++F +P VF + + F S F K+
Sbjct: 109 NEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKN 167
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQ 295
+ +R L +L F+LRR K + + LPP EI + +Q
Sbjct: 168 CLGDQKLVER---------LHAVLKPFLLRRIKTDVEKS----LPPKKEIKIYLGLSKMQ 214
Query: 296 KKVYASILRKE--------------LPKLLALSSRTANHQSLQNTA-------------- 327
++ Y IL K+ L +L + NH L + A
Sbjct: 215 REWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHIVS 274
Query: 328 -SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFA 386
SGK+VVLD LL KL G RVL+F+QMT+ LDIL+D+ R Y Y RLDG EER
Sbjct: 275 NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREE 334
Query: 387 AIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQA 446
AI F+ A + F+FM+STRAGG+G+NL +AD VI Y+ DWNPQVD QA
Sbjct: 335 AIEAFN-----------APNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQA 383
Query: 447 LQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
+ RAHRIGQ V L+T++TVEE I+ RAE KLRL V+
Sbjct: 384 MDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVI 426
>gi|408397898|gb|EKJ77035.1| hypothetical protein FPSE_02679 [Fusarium pseudograminearum CS3096]
Length = 1671
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 193/509 (37%), Positives = 278/509 (54%), Gaps = 78/509 (15%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F EL+ Q+ GL++L + G NV+L DEMGLGKT+Q +SFLS+L+ ++ GP
Sbjct: 445 DFIKNGELRNFQLRGLNFLCLNWTKGNNVILADEMGLGKTVQTVSFLSWLRNARHQEGPS 504
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL-- 147
LV+ PLSV W ++P L + Y+G E RNI ++E + + +P
Sbjct: 505 LVVAPLSVIPAWCDTFNHWSPDLNYVVYLGP-EDARNI-------IREHELLVDGNPKKP 556
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
F++L+T+Y+ +L D FL I W +DEA RLKN S LYN L +F +P ++L+TG
Sbjct: 557 KFNILVTSYEFILQDWQFLQSIKWQTLAVDEAHRLKNRESQLYNRL-VNFGIPCKVLITG 615
Query: 208 TPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSA 267
TPIQNNL+EL AL+ F P +++ L D++ ++ A +E+ L ++
Sbjct: 616 TPIQNNLAELSALLDFLNPGKV-DIDEDL----DSLSANDA------QEKLQQLHKAIAP 664
Query: 268 FMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELP------------- 308
++LRRTK+ VE LPP T E++ +Q Y +IL +
Sbjct: 665 YILRRTKE-TVESD---LPPKTEKIIRVELSDVQLDYYKNILTRNYSALCDATNGHKNSL 720
Query: 309 ----------------------KLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGH 346
K+LA S R + +SGK+++LD LL KL GH
Sbjct: 721 LNIMMELKKISNHPYMFPGAEEKVLAGSVRREDQIKGLIASSGKMMLLDQLLSKLNKDGH 780
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDIL D+ LR Y ++RLDG+I A R AI HF+ A
Sbjct: 781 RVLIFSQMVKMLDILGDYCSLRGYKFQRLDGTIAAGPRRMAINHFN-----------ADD 829
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+D F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V LV+
Sbjct: 830 SDDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKRPVNIYRLVS 889
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVD 495
+ TVEE ++ RA KL L + + V D
Sbjct: 890 KETVEEEVLERARNKLLLEYLTIQAGVTD 918
>gi|256070735|ref|XP_002571698.1| helicase [Schistosoma mansoni]
Length = 1035
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 206/547 (37%), Positives = 289/547 (52%), Gaps = 103/547 (18%)
Query: 29 AEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPG 87
EFG+T ++ +Q++G++WLI G LL DEMGLGKT Q I F+ + + S
Sbjct: 24 VEFGLTGIVIREYQLQGINWLINCDSQGHGGLLCDEMGLGKTCQVICFILAVS-NWKSNS 82
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL 147
FL++CPLSV + W E+ P + + Y+G++ R N+R + +K
Sbjct: 83 TFLIVCPLSVIENWRCELQNIAPNISFMTYIGDKVARHNLRSDYNKSIK----------- 131
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR-RLLMT 206
VLLTTY++ + D+ F + W Y I+DE RLKN ++ +Y +L E P R ++T
Sbjct: 132 ---VLLTTYEICINDEAFFKTVYWNYVIVDEGHRLKNSNTQIYAMLNE--TCPGIRFILT 186
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTPIQNNL EL+ L+HF P+ F STF + + S+ K Q + IL
Sbjct: 187 GTPIQNNLEELYNLLHFISPNYFHK--NLCSTFINYFNHSN-------KNQ--DMAKILR 235
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKE-------------- 306
F+LRR KQ ++ LPP +I T LQ K+Y +L +
Sbjct: 236 PFLLRRIKQNVLT----DLPPRADILIYHSLTGLQTKIYRVLLTRNADLFQSITDQQNNL 291
Query: 307 -----LPKLLALSSRTANHQSLQN--------------TASGKLVVLDLLLKKLYNSG-- 345
L L+ + NH L + AS KL +LDLLL+ LYN
Sbjct: 292 RIQNRLQNLIVNLRKCVNHPYLFDGVEPEPFTLGEHLVQASSKLFLLDLLLQFLYNPNNS 351
Query: 346 --------------HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHF 391
H+VL+F+QMT+ LDI+QD+L LR YSYERLDGS+R E+RF A++ F
Sbjct: 352 QLDKSFYSSKSKPVHKVLIFSQMTRMLDIIQDYLTLRGYSYERLDGSVRGEDRFQAVKSF 411
Query: 392 SVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAH 451
+ + FVF++STRAGG GLNLV+ADTVIF + D+NPQ+D QA RAH
Sbjct: 412 NEDQ------------ETFVFLLSTRAGGQGLNLVSADTVIFVDSDFNPQIDVQAAGRAH 459
Query: 452 RIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG-DDVVDREVKERTAVETDDLR 510
RIGQ V + LV HTVEE I+ RAE KL+L+ V+ D+ + E D+L
Sbjct: 460 RIGQKKPVRIVRLVCRHTVEEAILSRAENKLKLATRVLNTTDLNNLENNTDKPFTFDELN 519
Query: 511 SII-FGL 516
+++ FGL
Sbjct: 520 NVLKFGL 526
>gi|387595687|gb|EIJ93310.1| transcription activator [Nematocida parisii ERTm1]
Length = 861
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 189/518 (36%), Positives = 279/518 (53%), Gaps = 82/518 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+T L+ +Q+EGL+WLI Y +N +L DEMGLGKTLQ IS L YL ++ + P L++
Sbjct: 66 ITGTLRHYQIEGLNWLINMYEKKINCILADEMGLGKTLQTISLLGYLYTTKKNKLPNLLI 125
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W +E KF P ++ + + R++I+ E + L +
Sbjct: 126 VPKSTLQNWKNEFKKFMPGIKTIIF---HCSRKDIKLKAKE----------LQELDYIAC 172
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP--RRLLMTGTPI 210
+TTY++ L + L + W Y +IDEA R+KN +VL V+R ++P RLL+TGTP+
Sbjct: 173 ITTYEMCLAGKSQLQTVDWQYIVIDEAHRIKNEQTVLSKVVR---IIPCTHRLLLTGTPL 229
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNN+ ELWAL++F P VF F DA SS+ G E L+ +L F+L
Sbjct: 230 QNNIHELWALLNFLAPEVFSDGEGF-----DAWVESSSNDTGN--ETVDKLRNLLGLFIL 282
Query: 271 RRTKQKLVECGHLMLP--------PLTEITVLQKKVYASILRKELPKLLALSSR------ 316
RR K + + +LP PLT+ +Q+K Y IL K+ ++ S+
Sbjct: 283 RREKADVEKS---LLPKKIINLYSPLTD---MQRKWYKMILEKDAENVVNEGSKVQLMNI 336
Query: 317 ------TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L + A SGKL++LD LL L G RVL+F+QMT
Sbjct: 337 VCQLRKCCNHPYLFDGAEPGPPYTTGEHIIENSGKLLMLDKLLVHLKQKGSRVLIFSQMT 396
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ R++ Y R+DGS E+R AI F+ ++ + F+F++S
Sbjct: 397 RMLDILEDYCNYRQHEYCRIDGSTSTEDRCEAIEEFNKPNS-----------EIFIFLLS 445
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AD VI Y+ DWNPQ+D QA RAHRIGQ V N ++E+T+EE I+
Sbjct: 446 TRAGGLGINLATADVVIVYDNDWNPQMDLQAQDRAHRIGQKKQVFVFNFLSENTIEEKIL 505
Query: 476 RRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KL+L + +V + K+ A+ ++L I+
Sbjct: 506 ERAMKKLKLD-----EIIVQNQKKKDNAISQNELLGIL 538
>gi|448519638|ref|XP_003868122.1| Chd1 protein [Candida orthopsilosis Co 90-125]
gi|380352461|emb|CCG22687.1| Chd1 protein [Candida orthopsilosis]
Length = 1387
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 218/662 (32%), Positives = 325/662 (49%), Gaps = 103/662 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q ++FLS+L +++ GP L
Sbjct: 342 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHL 401
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W K++P + + Y+G E RR IR YE N P F+
Sbjct: 402 VVVPLSTIPAWQETFEKWSPDINCIYYLGNGEARRTIRD--YEWY-----TPNGKP-KFN 453
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLTTY+ +L D+ L + W + +DEA RLKN S LY L+ F RLL+TGTP+
Sbjct: 454 VLLTTYEYILKDRNELGSLKWQFLAVDEAHRLKNADSSLYESLKS-FRCANRLLITGTPL 512
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL AL +F MP F + D S L+ + ++L
Sbjct: 513 QNNLKELAALCNFLMPGKFDIEQEIDFETPDEEQES----------YIKDLQKKIKPYIL 562
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS--------- 315
RR K K VE LP T E++ +Q Y +I+ K L A ++
Sbjct: 563 RRLK-KDVETS---LPSKTERILRVELSDIQTDYYKNIITKNYAALNAGNNGSQISLLNV 618
Query: 316 -----RTANHQSLQNTA-----------------------SGKLVVLDLLLKKLYNSGHR 347
+ +NH L + A SGK+V+L+ LL +L GHR
Sbjct: 619 MSELKKASNHPYLFDGAEERVLARAGSPTRENILKGMIMSSGKMVLLEQLLSRLKKEGHR 678
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++ ++ Y ++RLDG I + +R +I HF+ A +
Sbjct: 679 VLIFSQMVRMLDILGDYMSIKGYQFQRLDGGIPSSQRRISIDHFN-----------APDS 727
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV V++
Sbjct: 728 KDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVSK 787
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVE--TDDLRSII-FGLHLFDPKAI 524
TVEE I+ RA +K+ L + ++ + D K+ E T +L I+ FG
Sbjct: 788 DTVEEQILERARKKMILEYAIISLGITDPNAKKSNKTEPSTSELSQILKFGASTMFKDND 847
Query: 525 NNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAG----RKFEVNPV-ALLEESDLLMHESF 579
N ++ ++L L + + E + S ++FEV A +E D++ +
Sbjct: 848 NQQKLENLNLDEVLNHAEDHVTTPELGESNLGSEEFLKQFEVTDYKADIEWDDIIPQDEL 907
Query: 580 A---------SATSYPDLDEASY---RSWVEKFKEAS------ESSSNTIAESGRRRSPE 621
+ Y A Y ++ V KF+ S E S++ + SGRRR+ +
Sbjct: 908 TKLKDEEKKKADEEYLQQQIAMYSKRKAAVRKFENGSVVPSDVEDSADDVKSSGRRRATD 967
Query: 622 DK 623
++
Sbjct: 968 NQ 969
>gi|356549071|ref|XP_003542921.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
isoform 1 [Glycine max]
Length = 1069
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 299/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 190 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIKGPHMVV 249
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G ++RR+IR + K FDV
Sbjct: 250 APKSTLGNWMNEIRRFCPILRAIKFLGNPDERRHIRDELLVAGK------------FDVC 297
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 298 VTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYSTNYRLLITGTPLQN 356
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 357 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 409
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 410 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQL 465
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 466 RKCCNHPYLFQGAEPGPPFTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 525
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ ++R A+I F+ G++ FVF++STRAG
Sbjct: 526 ILEDYLVFRGYQYCRIDGNTGGDDRDASIDAFN-----------KPGSEKFVFLLSTRAG 574
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 575 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 634
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ FG + F K I +E+ D +
Sbjct: 635 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 690
Query: 536 GLNSMVE 542
G + E
Sbjct: 691 GEEATAE 697
>gi|30686915|ref|NP_568365.2| chromatin remodeling factor17 [Arabidopsis thaliana]
gi|332005204|gb|AED92587.1| chromatin remodeling factor17 [Arabidopsis thaliana]
Length = 1069
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 299/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL + GP +V+
Sbjct: 190 IQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 249
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G E+RR+IR + K FD+
Sbjct: 250 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGK------------FDIC 297
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 298 VTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNYRLLITGTPLQN 356
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF + F F+ + + +E L +L F+LRR
Sbjct: 357 NLHELWALLNFLLPEVFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 409
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 410 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQL 465
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L T +GK+V+LD LL KL + RVL+F+QMT+ LD
Sbjct: 466 RKCCNHPYLFQGAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 525
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ +ER A+I ++ G++ FVF++STRAG
Sbjct: 526 ILEDYLMYRGYQYCRIDGNTGGDERDASIEAYN-----------KPGSEKFVFLLSTRAG 574
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+ +E ++ RA
Sbjct: 575 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAY 634
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ +G + F K I +E+ D +
Sbjct: 635 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAK 690
Query: 536 GLNSMVE 542
G + E
Sbjct: 691 GEEATAE 697
>gi|403216742|emb|CCK71238.1| hypothetical protein KNAG_0G01800 [Kazachstania naganishii CBS
8797]
Length = 1476
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 183/510 (35%), Positives = 278/510 (54%), Gaps = 74/510 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++F+S+L +S+ GP L
Sbjct: 374 FVKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIYSRRQNGPHL 433
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
++ PLS W K+ P L L Y+G ++ R +R + + NV F+
Sbjct: 434 IVVPLSTMPAWQETFTKWAPDLNCLCYMGNQKSRDMLRDYEFYTNPQAKGKKNVK---FN 490
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VL+TTY+ +L D+ LS+I W + +DEA RLKN S LY L F + RLL+TGTP+
Sbjct: 491 VLMTTYEYILKDRDELSKIKWQFLAVDEAHRLKNAESSLYESLNS-FKVTNRLLITGTPL 549
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNN+ EL AL++F MP F T++Q + F++ + K +E L L F+L
Sbjct: 550 QNNIKELAALVNFLMPGRF-TIDQEID-FEN--------QDDKQEEYIRDLHQRLQPFIL 599
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS---------- 314
RR K+ + + LP T E++ +Q + Y +IL K L A S
Sbjct: 600 RRLKKDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYKALTAGSKGGHFSLLNV 655
Query: 315 ----SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSG 345
+ +NH L + A SGK+V+LD LL +L
Sbjct: 656 MSELKKASNHPYLFDNAEERVLEKFGGGNLSRENILRGLIMSSGKMVLLDQLLTRLKKDN 715
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
HRVL+F+QM + LDI+ D+L ++ +++RLDG++ + +R AI HF+ + +
Sbjct: 716 HRVLIFSQMVRMLDIMSDYLSIKGINFQRLDGTVPSAQRRIAIDHFNAPDSTDE------ 769
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
VF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV
Sbjct: 770 -----VFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLV 824
Query: 466 TEHTVEEVIMRRAERKLRLSHNVVGDDVVD 495
++ TVEE ++ RA +K+ L + ++ V D
Sbjct: 825 SKDTVEEEVLERARKKMILEYAIISLGVTD 854
>gi|322701606|gb|EFY93355.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Metarhizium acridum CQMa 102]
Length = 1416
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 283/535 (52%), Gaps = 79/535 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL ++
Sbjct: 518 TEQASILVGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKLQ 577
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E K+ P + + Y G N R+ E +++
Sbjct: 578 SGPYLVIVPLSTLTNWNLEFEKWAPSISRIVYKGPP----NARKLQQEKIRQGR------ 627
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L +++++ RL++
Sbjct: 628 ---FQVLLTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNSNSKLSATIQQYYTTRFRLIL 684
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNL+ELW++++F +P++F ++ F F ++ + ++ E+
Sbjct: 685 TGTPLQNNLAELWSMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMELTEEEQILVIRR 744
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR---------- 304
L +L F+LRR K+ + + LP TE + LQ K+Y ++
Sbjct: 745 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQAKLYKQMVTHNKLVVSDGK 800
Query: 305 ------KELPKLLALSSRTANH-------------QSLQNT----ASGKLVVLDLLLKKL 341
+ L ++ + NH S+ N +GK +LD +L K
Sbjct: 801 GGKTNARGLSNMIMQLRKLCNHPFVFDEVENVMNPMSISNDLLWRTAGKFELLDRILPKY 860
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+GHRVL+F QMT +DI++D+L RK+ Y RLDG+ +++ER ++ F+
Sbjct: 861 QATGHRVLMFFQMTAIMDIMEDYLRYRKFEYLRLDGTTKSDERSDLLKEFN--------- 911
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
A + F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 912 --APDSKYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 969
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+ L++ ++VEE I+ RA KL + V+ DR+ RT +E+ D+
Sbjct: 970 LRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLESADM 1024
>gi|30686918|ref|NP_850847.1| chromatin remodeling factor17 [Arabidopsis thaliana]
gi|332005205|gb|AED92588.1| chromatin remodeling factor17 [Arabidopsis thaliana]
Length = 1072
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 299/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL + GP +V+
Sbjct: 190 IQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 249
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G E+RR+IR + K FD+
Sbjct: 250 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGK------------FDIC 297
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 298 VTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNYRLLITGTPLQN 356
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF + F F+ + + +E L +L F+LRR
Sbjct: 357 NLHELWALLNFLLPEVFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 409
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 410 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQL 465
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L T +GK+V+LD LL KL + RVL+F+QMT+ LD
Sbjct: 466 RKCCNHPYLFQGAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 525
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ +ER A+I ++ G++ FVF++STRAG
Sbjct: 526 ILEDYLMYRGYQYCRIDGNTGGDERDASIEAYN-----------KPGSEKFVFLLSTRAG 574
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+ +E ++ RA
Sbjct: 575 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAY 634
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ +G + F K I +E+ D +
Sbjct: 635 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAK 690
Query: 536 GLNSMVE 542
G + E
Sbjct: 691 GEEATAE 697
>gi|340370186|ref|XP_003383627.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Amphimedon
queenslandica]
Length = 1047
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 268/494 (54%), Gaps = 71/494 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +++ +QV GL+W+I Y G+N +L DEMGLGKTLQ I+ L Y+ + PGP +
Sbjct: 152 FIKNGKMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYMIHLRDVPGPHI 211
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ P S W+ E ++ P + + +G +E+R I + E+ + P ++
Sbjct: 212 VIAPKSTLANWMMEFKRWCPSIVTICLIGTQEERARI-------ISEE-----ILPGEWN 259
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
V++T+Y++VL ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+
Sbjct: 260 VVITSYEMVLKEKATFKKFSWRYMVIDEAHRIKNEKSKLSEIVRE-FNTANRLLLTGTPL 318
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL ELWAL++F +P F + F DA + S + K+ ++ L +L F+L
Sbjct: 319 QNNLHELWALLNFLLPDFFDSSEDF-----DAWFNKSNLEDSKLVDR---LHTVLRPFLL 370
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKL 310
RR K + + LPP E V +Q+++Y IL K+ L +
Sbjct: 371 RRLKSDVEK----KLPPKKETKVYVGLSKMQRELYTGILLKDIDVVNGVGKMEKVRLLNI 426
Query: 311 LALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
L + NH L + A GKL +L+ LL +L + G RVL+F QMT
Sbjct: 427 LMQLRKCCNHPYLFDGAEPGPPYTTDSHIVYNCGKLSLLEKLLPRLQSEGSRVLIFCQMT 486
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL+D+ ++Y Y RLDG +R +I F+ G+D F+FM+S
Sbjct: 487 RMLDILEDYCLWKEYKYCRLDGQTAHSDRQDSINDFN-----------RPGSDKFIFMLS 535
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V +TE++VEE I+
Sbjct: 536 TRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKQVRIFRFITENSVEERIV 595
Query: 476 RRAERKLRLSHNVV 489
RAE KL L V+
Sbjct: 596 ERAEMKLHLDQVVI 609
>gi|334185131|ref|NP_001189826.1| chromatin-remodeling protein 11 [Arabidopsis thaliana]
gi|332640866|gb|AEE74387.1| chromatin-remodeling protein 11 [Arabidopsis thaliana]
Length = 1057
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 295/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL + GP +V+
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 244
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G E+RR+IR + K FD+
Sbjct: 245 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGK------------FDIC 292
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 293 VTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNYRLLITGTPLQN 351
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 352 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 404
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 405 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQL 460
Query: 317 --TANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L T +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ +ER A+I ++ G++ FVF++STRAG
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYN-----------KPGSEKFVFLLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE +EE ++ RA
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAY 629
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ +G + F K I +E+ D +
Sbjct: 630 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAK 685
Query: 536 GLNSMVE 542
G + E
Sbjct: 686 GEEATAE 692
>gi|25144179|ref|NP_498468.2| Protein ISW-1 [Caenorhabditis elegans]
gi|21264515|sp|P41877.2|ISW1_CAEEL RecName: Full=Chromatin-remodeling complex ATPase chain isw-1;
AltName: Full=Nucleosome-remodeling factor subunit isw-1
gi|351062670|emb|CCD70709.1| Protein ISW-1 [Caenorhabditis elegans]
Length = 1009
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 184/499 (36%), Positives = 262/499 (52%), Gaps = 71/499 (14%)
Query: 27 DAAEFGV-TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D + F + E++ +QV GL+WL +N +L DEMGLGKTLQ IS + Y+K +
Sbjct: 121 DKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNK 180
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
P LV+ P S W +E K+ P + + +G+ R + R + +
Sbjct: 181 ASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDV------------IL 228
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
P FDV TTY+++L + L ++ W Y IIDEA R+KN S L +RE RLL+
Sbjct: 229 PQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRE-LNSENRLLI 287
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGIL 265
TGTP+QNNL ELWAL++F +P +F + + F S F + S + + L +L
Sbjct: 288 TGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNT-------DLVQRLHKVL 340
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE------------- 306
F+LRR K + + L P E+ V +Q++ Y +L K+
Sbjct: 341 QPFLLRRIKSDVEKS----LLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKA 396
Query: 307 -LPKLLALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
L +L + NH L + A SGK+VVLD LL K G RVL+
Sbjct: 397 RLMNILMHLRKCVNHPYLFDGAEPGPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLI 456
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+Q ++ LD+L+DF R Y Y RLDGS E+R AI ++ A + F
Sbjct: 457 FSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYN-----------APDSKKF 505
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+FM++TRAGG+G+NL AD VI Y+ DWNPQ D QA+ RAHRIGQ V L+TE+TV
Sbjct: 506 IFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTV 565
Query: 471 EEVIMRRAERKLRLSHNVV 489
+E I+ +AE KLRL + V+
Sbjct: 566 DERIIEKAEAKLRLDNIVI 584
>gi|356549073|ref|XP_003542922.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
isoform 2 [Glycine max]
Length = 1062
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 299/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 183 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIKGPHMVV 242
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G ++RR+IR + K FDV
Sbjct: 243 APKSTLGNWMNEIRRFCPILRAIKFLGNPDERRHIRDELLVAGK------------FDVC 290
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 291 VTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYSTNYRLLITGTPLQN 349
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 350 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 402
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 403 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQL 458
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 459 RKCCNHPYLFQGAEPGPPFTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 518
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ ++R A+I F+ G++ FVF++STRAG
Sbjct: 519 ILEDYLVFRGYQYCRIDGNTGGDDRDASIDAFN-----------KPGSEKFVFLLSTRAG 567
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 568 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 627
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ FG + F K I +E+ D +
Sbjct: 628 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 683
Query: 536 GLNSMVE 542
G + E
Sbjct: 684 GEEATAE 690
>gi|20259462|gb|AAM13851.1| putative ATPase (ISW2) [Arabidopsis thaliana]
Length = 1055
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 295/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL + GP +V+
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 244
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G E+RR+IR + K FD+
Sbjct: 245 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGK------------FDIC 292
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 293 VTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNYRLLITGTPLQN 351
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 352 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 404
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 405 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQL 460
Query: 317 --TANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L T +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ +ER A+I ++ G++ FVF++STRAG
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYN-----------KPGSEKFVFLLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE +EE ++ RA
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAY 629
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ +G + F K I +E+ D +
Sbjct: 630 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAK 685
Query: 536 GLNSMVE 542
G + E
Sbjct: 686 GEEATAE 692
>gi|37542688|gb|AAL47203.1| chromatin-remodeling factor CHD3 [Oryza sativa Indica Group]
Length = 1111
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/514 (36%), Positives = 272/514 (52%), Gaps = 81/514 (15%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ +F L P+Q+EGL++L + V+LGDEMGLGKT+Q+I+FL L ++
Sbjct: 276 ESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVDKL-- 333
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ-------- 138
GP LV+ PLS W E A + P++ V+ Y G R IR+ + + KE+
Sbjct: 334 GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRKYEFYYPKEKPKKLKKKK 393
Query: 139 ----SQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR 194
++ S + FDVLLT+Y+++ MD L I W I+DE RLKN S L+ L+
Sbjct: 394 SSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLK 453
Query: 195 EHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKI 254
E+ R+L+TGTP+QNNL EL+ LMHF FG++ FKD
Sbjct: 454 EYH-TKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQD--------- 503
Query: 255 KEQFTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELP 308
+Q L G+L +LRR K+ +++ LPP E+T QK+ Y +IL K
Sbjct: 504 -KQVEKLHGMLKPHLLRRFKKDVMK----ELPPKKELILRVELTSKQKEYYKAILTKNYE 558
Query: 309 KLLALSSRTANHQSLQNT--------------------------------ASGKLVVLDL 336
L+ R+ H SL N +SGK+ +LD
Sbjct: 559 ---VLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDK 615
Query: 337 LLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSA 396
++ KL GHRVL+++Q LD+L+D+L RK+SYER+DG I ER I F+ +++
Sbjct: 616 MMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNS 675
Query: 397 IERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQM 456
F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ
Sbjct: 676 TR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 724
Query: 457 NHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG 490
+ V+ LV+ T+EE +M+ ++K+ L H VVG
Sbjct: 725 SKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVG 758
>gi|19115879|ref|NP_594967.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces pombe 972h-]
gi|15214050|sp|O14139.1|HRP3_SCHPO RecName: Full=Chromodomain helicase hrp3; AltName:
Full=ATP-dependent helicase hrp3
gi|2408073|emb|CAB16277.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces pombe]
Length = 1388
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 199/549 (36%), Positives = 294/549 (53%), Gaps = 84/549 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++FLSYL S GPFLV+ P
Sbjct: 373 GELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVP 432
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +A + + + Y+G R+ IR YE + +Q + F++LLT
Sbjct: 433 LSTVPAWQETLALWASDMNCISYLGNTTSRQVIRD--YEFYVDGTQ-----KIKFNLLLT 485
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ VL D+ LS I W Y IDEA RLKN S LY L + F RLL+TGTP+QNN+
Sbjct: 486 TYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQ-FKNSNRLLITGTPLQNNI 544
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL+ F MP F + + AP + + SL+ L ++LRR K
Sbjct: 545 RELAALVDFLMPGKFEIREEI---------NLEAPDEEQ-EAYIRSLQEHLQPYILRRLK 594
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKE---------------LPKLLAL 313
+ + + LP + E++ LQ Y +IL + L ++
Sbjct: 595 KDVEKS----LPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVVE 650
Query: 314 SSRTANHQSLQNTA------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L + SGK+V+LD LL +L GHRVL
Sbjct: 651 LKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRVL 710
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L LR Y ++RLDG++ A R +I HF+ A +
Sbjct: 711 IFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFN-----------APNSPD 759
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ L+++ T
Sbjct: 760 FVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDT 819
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREVKERT-AVETDDLRSII-FGL-HLFDPKAINN 526
+EE ++ RA RK+ L + ++ V D++ + ++L +I+ FG ++F KA NN
Sbjct: 820 IEEDVLERARRKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNMF--KAENN 877
Query: 527 EES-DDLRL 534
++ +D+ L
Sbjct: 878 QKKLEDMNL 886
>gi|297812047|ref|XP_002873907.1| hypothetical protein ARALYDRAFT_488746 [Arabidopsis lyrata subsp.
lyrata]
gi|297319744|gb|EFH50166.1| hypothetical protein ARALYDRAFT_488746 [Arabidopsis lyrata subsp.
lyrata]
Length = 1074
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 199/547 (36%), Positives = 299/547 (54%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL + GP +V+
Sbjct: 190 IQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 249
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G E+RR+IR + K FD+
Sbjct: 250 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELLVAGK------------FDIC 297
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 298 VTSFEMAIKEKTSLRRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNYRLLITGTPLQN 356
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF + F F+ + + +E L +L F+LRR
Sbjct: 357 NLHELWALLNFLLPEVFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 409
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 410 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGGGERKRLLNIAMQL 465
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L T +GK+V+LD LL KL + RVL+F+QMT+ LD
Sbjct: 466 RKCCNHPYLFQGAEPGPPYTTGDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 525
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ +ER A+I ++ G++ FVF++STRAG
Sbjct: 526 ILEDYLMYRGYQYCRIDGNTGGDERDASIEAYN-----------KPGSEKFVFLLSTRAG 574
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+ +E ++ RA
Sbjct: 575 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIERAY 634
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ +G + F K I +E+ D +
Sbjct: 635 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAK 690
Query: 536 GLNSMVE 542
G + E
Sbjct: 691 GEEATAE 697
>gi|22330875|ref|NP_187291.2| chromatin-remodeling protein 11 [Arabidopsis thaliana]
gi|357529491|sp|Q8RWY3.3|ISW2_ARATH RecName: Full=Putative chromatin-remodeling complex ATPase chain;
AltName: Full=ISW2-like; AltName: Full=Sucrose
nonfermenting protein 2 homolog
gi|332640865|gb|AEE74386.1| chromatin-remodeling protein 11 [Arabidopsis thaliana]
Length = 1055
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 295/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL + GP +V+
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 244
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G E+RR+IR + K FD+
Sbjct: 245 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGK------------FDIC 292
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 293 VTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNYRLLITGTPLQN 351
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 352 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 404
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 405 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQL 460
Query: 317 --TANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L T +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ +ER A+I ++ G++ FVF++STRAG
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYN-----------KPGSEKFVFLLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE +EE ++ RA
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAY 629
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ +G + F K I +E+ D +
Sbjct: 630 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAK 685
Query: 536 GLNSMVE 542
G + E
Sbjct: 686 GEEATAE 692
>gi|225678325|gb|EEH16609.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides brasiliensis Pb03]
Length = 1391
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 266/501 (53%), Gaps = 72/501 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL + GPFLV+
Sbjct: 492 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPFLVI 551
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G R+ Q + F VL
Sbjct: 552 VPLSTLTNWNLEFEKWAPSVSRIVYKGPPTTRK-------------QQQQAIRWGNFQVL 598
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS++ W + I+DE R+KN S L + L +++ RL++TGTP+QN
Sbjct: 599 LTTYEYIIKDRPVLSKVKWIHMIVDEGHRMKNAGSKLSSTLTQYYTTRYRLILTGTPLQN 658
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELW L++F +P++F ++ F F ++ R + E+ L +L
Sbjct: 659 NLPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLHKVLRP 718
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR----------------K 305
F+LRR K+ + + LP E + LQ K+Y ++ +
Sbjct: 719 FLLRRLKKDVEKD----LPEKQERVIKCRFSALQAKLYKQLVTHNKLVVSDGKGGKTGMR 774
Query: 306 ELPKLLALSSRTANH----QSLQNT-------------ASGKLVVLDLLLKKLYNSGHRV 348
L +L + NH +S+++ +GK +LD +L K SGHRV
Sbjct: 775 GLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDLIWRTAGKFELLDRILPKFKASGHRV 834
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F QMTQ ++I++DFL LR Y RLDGS ++++R ++ F+ A G++
Sbjct: 835 LMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKEFN-----------APGSE 883
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V + L+T +
Sbjct: 884 YFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSN 943
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
+VEE I+ RA+ KL + V+
Sbjct: 944 SVEERILERAQFKLDMDGKVI 964
>gi|334185133|ref|NP_001189827.1| chromatin-remodeling protein 11 [Arabidopsis thaliana]
gi|332640867|gb|AEE74388.1| chromatin-remodeling protein 11 [Arabidopsis thaliana]
Length = 1056
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 295/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL + GP +V+
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 244
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G E+RR+IR + K FD+
Sbjct: 245 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGK------------FDIC 292
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 293 VTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNYRLLITGTPLQN 351
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 352 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 404
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 405 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQL 460
Query: 317 --TANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L T +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ +ER A+I ++ G++ FVF++STRAG
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYN-----------KPGSEKFVFLLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE +EE ++ RA
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAY 629
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ +G + F K I +E+ D +
Sbjct: 630 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAK 685
Query: 536 GLNSMVE 542
G + E
Sbjct: 686 GEEATAE 692
>gi|302802510|ref|XP_002983009.1| hypothetical protein SELMODRAFT_117536 [Selaginella moellendorffii]
gi|300149162|gb|EFJ15818.1| hypothetical protein SELMODRAFT_117536 [Selaginella moellendorffii]
Length = 975
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/543 (36%), Positives = 290/543 (53%), Gaps = 72/543 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +Q+ GL+WLI+ Y G+N +L DEMGLGKTLQ IS L YL + GP +V+ P S
Sbjct: 110 MRDYQLAGLNWLIKLYENGINGILADEMGLGKTLQTISLLGYLHQYRKITGPHMVVAPKS 169
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E+ KF P L +++ G +E+R R + + P FDV +T++
Sbjct: 170 TLGNWMNEIRKFCPILRAVKFHGTQEERAYQRDNL------------LKPGKFDVCVTSF 217
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ + ++ L + W Y IIDEA R+KN S+L +R F RLL+TGTP+QNNL E
Sbjct: 218 EMAIKEKAALKKFSWRYIIIDEAHRIKNEKSILAKTMR-IFSTNFRLLITGTPLQNNLHE 276
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P +F + F F+ + + +E L +L F+LRR K
Sbjct: 277 LWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRRLKSD 329
Query: 277 LVECGHLMLPPLTE------ITVLQKKVYASILRKELP---------KLLALS---SRTA 318
VE G LPP E ++ +QK Y S+L+K+L +LL ++ +
Sbjct: 330 -VEKG---LPPKKETILKVGMSKMQKHYYGSLLQKDLDAINTGGERRRLLNIAMQLKKCC 385
Query: 319 NHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQD 363
NH L A SGK+V+LD LL KL RVL+F+QMT+ LDIL+D
Sbjct: 386 NHPYLFQGAEPGPPYLSGEHLVENSGKMVLLDKLLPKLKQRDSRVLIFSQMTRLLDILED 445
Query: 364 FLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGL 423
+ R Y Y R+DG EER AAI F+ + G++ F+F++STRAGG+G+
Sbjct: 446 YCIYRTYQYCRIDGKTSGEEREAAIESFNKE-----------GSEKFLFLLSTRAGGLGI 494
Query: 424 NLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLR 483
NL AD VI Y+ DWNPQ D QA RAHRIGQ V TE T+EE ++ RA +KL
Sbjct: 495 NLATADIVILYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTELTIEEKVIERAYKKLA 554
Query: 484 LSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLSGLNS 539
L V+ + E +V D+L ++ +G + F K I +E+ D + G +
Sbjct: 555 LDALVIQQGRLAEEKSMVKSVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEAA 614
Query: 540 MVE 542
E
Sbjct: 615 TAE 617
>gi|37542684|gb|AAL47211.1| chromatin-remodeling factor CHD3 [Oryza sativa]
Length = 1360
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/514 (36%), Positives = 272/514 (52%), Gaps = 81/514 (15%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ +F L P+Q+EGL++L + V+LGDEMGLGKT+Q+I+FL L ++
Sbjct: 276 ESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVDKL-- 333
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ-------- 138
GP LV+ PLS W E A + P++ V+ Y G R IR+ + + KE+
Sbjct: 334 GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRKYEFYYPKEKPKKLKKKK 393
Query: 139 ----SQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR 194
++ S + FDVLLT+Y+++ MD L I W I+DE RLKN S L+ L+
Sbjct: 394 SSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLK 453
Query: 195 EHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKI 254
E + R+L+TGTP+QNNL EL+ LMHF FG++ FKD
Sbjct: 454 E-YHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQD--------- 503
Query: 255 KEQFTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELP 308
+Q L G+L +LRR K+ +++ LPP E+T QK+ Y +IL K
Sbjct: 504 -KQVEKLHGMLKPHLLRRFKKDVMK----ELPPKKELILRVELTSKQKEYYKAILTKNYE 558
Query: 309 KLLALSSRTANHQSLQNT--------------------------------ASGKLVVLDL 336
L+ R+ H SL N +SGK+ +LD
Sbjct: 559 ---VLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDK 615
Query: 337 LLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSA 396
++ KL GHRVL+++Q LD+L+D+L RK+SYER+DG I ER I F+ +++
Sbjct: 616 MMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNS 675
Query: 397 IERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQM 456
F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ
Sbjct: 676 TR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 724
Query: 457 NHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG 490
+ V+ LV+ T+EE +M+ ++K+ L H VVG
Sbjct: 725 SKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVG 758
>gi|388580068|gb|EIM20386.1| hypothetical protein WALSEDRAFT_33426 [Wallemia sebi CBS 633.66]
Length = 1402
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 184/493 (37%), Positives = 271/493 (54%), Gaps = 75/493 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL +Q+ GL+WL + + +L DEMGLGKT+Q+I+++S+L + GPFLV+ P
Sbjct: 395 GELLDYQMTGLNWLAYLWSRMESGILADEMGLGKTVQSIAWISWLFHERQQYGPFLVVVP 454
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W ++ K+ P + V+ Y G + R IR + + + L F+VLLT
Sbjct: 455 LSTIPAWQAQFMKWAPDINVVCYNGSGKSREVIR---------EYEFGDYKKLKFNVLLT 505
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ L D+ L Q+ W ++DEA RLKN S LY L F+ +LL+TGTP+QNN+
Sbjct: 506 TYEFCLKDRAELGQMRWQALLVDEAHRLKNSESQLYETLFS-FVTNSKLLITGTPLQNNV 564
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL ALMHF MP + F T +D +E+ L L MLRR K
Sbjct: 565 KELSALMHFLMPERYSITGDFELTDEDR------------EEKIGQLHDQLKNIMLRRLK 612
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLL-------ALS------- 314
+ +++ LP + E++ LQ Y +IL K L A+S
Sbjct: 613 RDVIKS----LPTKSERILRVELSSLQTHYYRNILTKNFTALKSSEGGGPAMSMMNIAND 668
Query: 315 -SRTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ +NH L + A SGK+V+LD LL +L GHRVL+F+QM +
Sbjct: 669 LRKASNHPYLFDGAEGSINAKDEVLRGIVMNSGKMVLLDKLLARLKADGHRVLIFSQMVR 728
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDI+ D+L LR Y ++RLDG+I +E+R AI HF+ +++ + F F++ST
Sbjct: 729 MLDIISDYLSLRGYMHQRLDGTIPSEQRRKAINHFNAENSPD-----------FAFILST 777
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G++L A+TVI ++ DWNPQ D QA+ RAHRIGQ +HV V++ T+EE I+
Sbjct: 778 RAGGLGIDLQTANTVIIFDSDWNPQNDLQAMARAHRIGQKSHVSIYRFVSKDTMEEDILE 837
Query: 477 RAERKLRLSHNVV 489
RA+RK+ L + ++
Sbjct: 838 RAKRKMVLEYAII 850
>gi|218197711|gb|EEC80138.1| hypothetical protein OsI_21929 [Oryza sativa Indica Group]
gi|222635083|gb|EEE65215.1| hypothetical protein OsJ_20361 [Oryza sativa Japonica Group]
Length = 1309
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/514 (36%), Positives = 272/514 (52%), Gaps = 81/514 (15%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ +F L P+Q+EGL++L + V+LGDEMGLGKT+Q+I+FL L ++
Sbjct: 225 ESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVDKL-- 282
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ-------- 138
GP LV+ PLS W E A + P++ V+ Y G R IR+ + + KE+
Sbjct: 283 GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRKYEFYYPKEKPKKLKKKK 342
Query: 139 ----SQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR 194
++ S + FDVLLT+Y+++ MD L I W I+DE RLKN S L+ L+
Sbjct: 343 SSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLK 402
Query: 195 EHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKI 254
E + R+L+TGTP+QNNL EL+ LMHF FG++ FKD
Sbjct: 403 E-YHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQD--------- 452
Query: 255 KEQFTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELP 308
+Q L G+L +LRR K+ +++ LPP E+T QK+ Y +IL K
Sbjct: 453 -KQVEKLHGMLKPHLLRRFKKDVMK----ELPPKKELILRVELTSKQKEYYKAILTKNYE 507
Query: 309 KLLALSSRTANHQSLQNT--------------------------------ASGKLVVLDL 336
L+ R+ H SL N +SGK+ +LD
Sbjct: 508 ---VLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDK 564
Query: 337 LLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSA 396
++ KL GHRVL+++Q LD+L+D+L RK+SYER+DG I ER I F+ +++
Sbjct: 565 MMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNS 624
Query: 397 IERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQM 456
F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ
Sbjct: 625 TR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 673
Query: 457 NHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG 490
+ V+ LV+ T+EE +M+ ++K+ L H VVG
Sbjct: 674 SKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVG 707
>gi|6437558|gb|AAF08585.1|AC011623_18 putative ATPase (ISW2-like) [Arabidopsis thaliana]
Length = 1057
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 272/490 (55%), Gaps = 68/490 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL + GP +V+
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 244
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G E+RR+IR + K FD+
Sbjct: 245 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGK------------FDIC 292
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 293 VTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNYRLLITGTPLQN 351
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 352 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 404
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 405 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQL 460
Query: 317 --TANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L T +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ +ER A+I ++ G++ FVF++STRAG
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYN-----------KPGSEKFVFLLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE +EE ++ RA
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAY 629
Query: 480 RKLRLSHNVV 489
+KL L V+
Sbjct: 630 KKLALDALVI 639
>gi|302764218|ref|XP_002965530.1| hypothetical protein SELMODRAFT_84809 [Selaginella moellendorffii]
gi|300166344|gb|EFJ32950.1| hypothetical protein SELMODRAFT_84809 [Selaginella moellendorffii]
Length = 971
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 200/542 (36%), Positives = 291/542 (53%), Gaps = 74/542 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +Q+ GL+WLI+ Y G+N +L DEMGLGKTLQ IS L YL + GP +V+ P S
Sbjct: 110 MRDYQLAGLNWLIKLYENGINGILADEMGLGKTLQTISLLGYLHQYRKITGPHMVVAPKS 169
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E+ KF P L +++ G +E+R R + + P FDV +T++
Sbjct: 170 TLGNWMNEIRKFCPILRAVKFHGTQEERAYQRDNL------------LKPGKFDVCVTSF 217
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++ + ++ L + W Y IIDEA R+KN S+L +R F RLL+TGTP+QNNL E
Sbjct: 218 EMAIKEKAALKKFSWRYIIIDEAHRIKNEKSILAKTMR-IFSTNFRLLITGTPLQNNLHE 276
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P +F + F F+ + + +E L +L F+LRR K
Sbjct: 277 LWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRRLKSD 329
Query: 277 LVECGHLMLPPLTE------ITVLQKKVYASILRKELP---------KLLALS---SRTA 318
VE G LPP E ++ +QK Y S+L+K+L +LL ++ +
Sbjct: 330 -VEKG---LPPKKETILKVGMSKMQKHYYGSLLQKDLDAINTGGERRRLLNIAMQLKKCC 385
Query: 319 NHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQD 363
NH L A SGK+V+LD LL KL RVL+F+QMT+ LDIL+D
Sbjct: 386 NHPYLFQGAEPGPPYLSGEHLVENSGKMVLLDKLLPKLKQRDSRVLIFSQMTRLLDILED 445
Query: 364 FLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGL 423
+ R Y Y R+DG EER AAI F+ + G++ F+F++STRAGG+G+
Sbjct: 446 YCIYRTYQYCRIDGKTSGEEREAAIESFNKE-----------GSEKFLFLLSTRAGGLGI 494
Query: 424 NLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLR 483
NL AD VI Y+ DWNPQ D QA RAHRIGQ V TE T+EE ++ RA +KL
Sbjct: 495 NLATADIVILYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTELTIEEKVIERAYKKLA 554
Query: 484 LSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHL-FDPK--AINNEESDDLRLSGLNSM 540
L V+ R +E+T + + L+ + +G + F K I +E+ D + G +
Sbjct: 555 LDALVIQQ---GRLAEEKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEAAT 611
Query: 541 VE 542
E
Sbjct: 612 AE 613
>gi|358339541|dbj|GAA47583.1| chromodomain-helicase-DNA-binding protein 4 [Clonorchis sinensis]
Length = 1670
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 190/520 (36%), Positives = 276/520 (53%), Gaps = 69/520 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L +Q+EG++WL Y V+ +L DEMGLGKT+Q ISFL L S GPFLV P
Sbjct: 512 GQLHEYQLEGVNWLRFSYGNKVDTILADEMGLGKTIQTISFLYSLYKEGHSRGPFLVAAP 571
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEH----VKEQSQ---MSNVSPL 147
LS W E + P L V+ YVG+++ R IR+ + V+ S+ + + + +
Sbjct: 572 LSTIINWEREFEFWAPDLYVVSYVGDKDSRTVIRQHEFSFDEGAVRGGSKAMRLRSGTSV 631
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
F VLLT+Y+++ +DQ L I W ++DEA RLKN S + +L + + +LL+TG
Sbjct: 632 RFHVLLTSYELISIDQALLGSIDWEVLVVDEAHRLKNNQSKFFRILAS-YKIAYKLLLTG 690
Query: 208 TPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSA 267
TP+QNNL EL+ L+HF P F + FL F D +EQ L +L
Sbjct: 691 TPLQNNLEELFHLLHFMTPEKFHDMQGFLDEFADISK----------EEQVKKLHDMLGQ 740
Query: 268 FMLRRTK----QKLVECGHLMLPPLTEITVLQKKVYASILRKELPKLLALSS-------- 315
+LRR K Q + G ++ E++ +QK+ Y IL + L S
Sbjct: 741 HLLRRLKADVLQNMPSKGEFIV--RVELSPMQKRFYKFILTRNFEALSCRSGGSNVSLIN 798
Query: 316 ------RTANHQSLQNT--------------------ASGKLVVLDLLLKKLYNSGHRVL 349
+ NH L + ASGKL ++ +L+ LY++ HRVL
Sbjct: 799 IMMDLKKCCNHPYLFPSASEEAPRLPNGAYEGNALRKASGKLELMSKMLRNLYDTKHRVL 858
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QMT+ LD+L+DFLE Y +ER+DG I ++R Q AI+R A + +
Sbjct: 859 IFSQMTKVLDLLEDFLESEGYKFERIDGGITGQQR---------QDAIDRY--NAPDSPS 907
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT T
Sbjct: 908 FAFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRGT 967
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDL 509
VEE + + A++K+ L+H VV + + + + E DD+
Sbjct: 968 VEERVTQVAKKKMMLTHLVVRPGLGGKGSCQMSKKELDDI 1007
>gi|297829170|ref|XP_002882467.1| hypothetical protein ARALYDRAFT_477943 [Arabidopsis lyrata subsp.
lyrata]
gi|297328307|gb|EFH58726.1| hypothetical protein ARALYDRAFT_477943 [Arabidopsis lyrata subsp.
lyrata]
Length = 1055
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 295/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL + GP +V+
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 244
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G E+RR+IR + K FD+
Sbjct: 245 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRDDLLVAGK------------FDIC 292
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 293 VTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNYRLLITGTPLQN 351
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 352 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 404
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 405 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQL 460
Query: 317 --TANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L T +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ +ER A+I ++ G++ FVF++STRAG
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYN-----------KPGSEKFVFLLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE +EE ++ RA
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAY 629
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ +G + F K I +E+ D +
Sbjct: 630 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAK 685
Query: 536 GLNSMVE 542
G + E
Sbjct: 686 GEEATAE 692
>gi|70954393|ref|XP_746245.1| DNA helicase [Plasmodium chabaudi chabaudi]
gi|56526791|emb|CAH81164.1| DNA helicase, putative [Plasmodium chabaudi chabaudi]
Length = 1024
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/514 (35%), Positives = 276/514 (53%), Gaps = 75/514 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLK-------FSQMS 85
V L +Q+EGL WL+ + +N +L DEMGLGKT+Q IS +YLK SQ
Sbjct: 369 VGGNLMKYQLEGLEWLVSLHNNNLNGILADEMGLGKTVQTISLFAYLKELEGGEASSQFK 428
Query: 86 ----PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM 141
G L++ PLS W +E K+ P L V+ Y G + +R++I + + E
Sbjct: 429 MHNEVGKNLIIVPLSTLPNWSNEFEKWCPSLNVIIYKGNKNERKDISKVLLEE------- 481
Query: 142 SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
+D+ LTT+D+++ ++ L +I W Y IIDE R+KN S L+++L F+
Sbjct: 482 ------NYDICLTTFDIIIREKNILGKISWSYIIIDEGHRMKNDKSKLHSIL-SLFISKH 534
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ---- 257
R+L+TGTP+QNN++ELWAL++F +P +F + + F F + + +E+
Sbjct: 535 RILLTGTPLQNNMTELWALLNFILPKIFSSSSNFEEWFSLPLCNEKNVYESMTEEEELLI 594
Query: 258 FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV-LQKKVYASILRKELPKLL---AL 313
L IL FMLRR K+ ++E LP E + +Q +Y +L K++ +
Sbjct: 595 INRLHTILLPFMLRRLKKDVLE----FLPKKYEYNIYVQLSLYQKLLYKQIEEKTFKQVN 650
Query: 314 SSRTANHQSLQNT--------------------------ASGKLVVLDLLLKKLYNSGHR 347
S T N +S QNT +SGK VLD ++ KL H+
Sbjct: 651 SDGTVNTKSFQNTIMQLRKIVNHPFLFTNNYDINDCIIKSSGKFEVLDRMIPKLIKFKHK 710
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSV-----------QSA 396
+LLF QMT+ +DIL D+ ELR+Y Y RLDGS+ +R I +F+ Q+
Sbjct: 711 ILLFCQMTRVMDILCDYFELRRYKYHRLDGSVSLSDRRQIIDNFNEPKSVNNCKEIDQND 770
Query: 397 IERLYS-EAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQ 455
I L + E ++A +F++STR+GG+GLNL AADTVI ++ D+NP D QA+ R HRIGQ
Sbjct: 771 INDLSNQELDTDEAMIFILSTRSGGLGLNLQAADTVIIFDSDFNPHQDIQAMCRCHRIGQ 830
Query: 456 MNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
N V +T +VEE++ +RA+ KL ++ V+
Sbjct: 831 KNVVKVFRFITLSSVEELVFQRAKDKLNINDKVI 864
>gi|55771379|dbj|BAD72546.1| chromatin-remodeling factor CHD3 [Oryza sativa Japonica Group]
gi|55773904|dbj|BAD72509.1| chromatin-remodeling factor CHD3 [Oryza sativa Japonica Group]
Length = 1354
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/514 (36%), Positives = 272/514 (52%), Gaps = 81/514 (15%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ +F L P+Q+EGL++L + V+LGDEMGLGKT+Q+I+FL L ++
Sbjct: 270 ESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSLFVDKL-- 327
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ-------- 138
GP LV+ PLS W E A + P++ V+ Y G R IR+ + + KE+
Sbjct: 328 GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGSAASREIIRKYEFYYPKEKPKKLKKKK 387
Query: 139 ----SQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR 194
++ S + FDVLLT+Y+++ MD L I W I+DE RLKN S L+ L+
Sbjct: 388 SSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLK 447
Query: 195 EHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKI 254
E + R+L+TGTP+QNNL EL+ LMHF FG++ FKD
Sbjct: 448 E-YHTKHRVLLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQD--------- 497
Query: 255 KEQFTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELP 308
+Q L G+L +LRR K+ +++ LPP E+T QK+ Y +IL K
Sbjct: 498 -KQVEKLHGMLKPHLLRRFKKDVMK----ELPPKKELILRVELTSKQKEYYKAILTKNYE 552
Query: 309 KLLALSSRTANHQSLQNT--------------------------------ASGKLVVLDL 336
L+ R+ H SL N +SGK+ +LD
Sbjct: 553 ---VLTRRSGGHVSLINVVMELRKLCCHAFMTDEPEEPANSEEALRRLLESSGKMELLDK 609
Query: 337 LLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSA 396
++ KL GHRVL+++Q LD+L+D+L RK+SYER+DG I ER I F+ +++
Sbjct: 610 MMVKLKEQGHRVLIYSQFQHMLDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNS 669
Query: 397 IERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQM 456
F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ
Sbjct: 670 TR-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQT 718
Query: 457 NHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG 490
+ V+ LV+ T+EE +M+ ++K+ L H VVG
Sbjct: 719 SKVMIYRLVSRGTIEERMMQLTKKKMVLEHLVVG 752
>gi|170584903|ref|XP_001897230.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158595354|gb|EDP33914.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 1595
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 192/507 (37%), Positives = 264/507 (52%), Gaps = 102/507 (20%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+EG++W++ + + +L DEMGLGKT+Q+ISFLS L G FLV+ PL
Sbjct: 455 ELRDYQLEGVNWMLHAWTKENSCILADEMGLGKTIQSISFLSVLYHKYQLYGTFLVVVPL 514
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P L V+ YVG
Sbjct: 515 STMASWQHEFETWAPDLNVVTYVG------------------------------------ 538
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
DV D FL W +DEA RLKN S+LY L E F RLL+TGTP+QN+L
Sbjct: 539 -DVTSRDLSFLGSFEWAVLAVDEAHRLKNDESLLYRSLFE-FTTNHRLLVTGTPLQNSLK 596
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F + ++F + D+ H + A SL L F+LRR K+
Sbjct: 597 ELWALLHFIMPEKFDSWSEFEAEHHDSDHKTIA-----------SLHRKLQPFLLRRVKK 645
Query: 276 KLVECGHLMLPPLTE------ITVLQKKVYASILRK---ELPKLLALS-----------S 315
+ + LP E +T QK+ Y IL K EL K + S
Sbjct: 646 DVEKS----LPAKVEQILRVDMTAQQKQYYKWILTKNYKELSKGVKGSINGFVNLVMELK 701
Query: 316 RTANHQSLQNT-----------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH SL + +SGKL++LD LL +L +GHRVL+F+QM L
Sbjct: 702 KCCNHSSLVRSYDQAEEGADARLQQLLKSSGKLILLDKLLCRLQETGHRVLIFSQMVMML 761
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DI+Q++L+LR++ +RLDGS+R++ R AA+ HF+ ++ + F F++STRA
Sbjct: 762 DIMQEYLQLRRFPSQRLDGSMRSDLRKAALDHFNAPNSPD-----------FCFLLSTRA 810
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V LVT+ +VEE I+ RA
Sbjct: 811 GGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQKKQVNIYRLVTKASVEEEIVERA 870
Query: 479 ERKLRLSHNVVGD-DVVDREVKERTAV 504
+RKL L H ++ D R V +T V
Sbjct: 871 KRKLVLDHLIIQRMDTTGRTVLSKTTV 897
>gi|397611880|gb|EJK61508.1| hypothetical protein THAOC_17987, partial [Thalassiosira oceanica]
Length = 2145
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 188/524 (35%), Positives = 274/524 (52%), Gaps = 88/524 (16%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q+ GL W++ Y +N +L DEMGLGKT+Q IS ++YL ++ + GP+LV+ P
Sbjct: 1370 GDLKEYQLGGLQWMVSLYNNRLNGILADEMGLGKTIQTISLIAYLIEAKQNLGPYLVIVP 1429
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS WV+E AK+ P V+ Y G +QR+ + R V+ F+VLLT
Sbjct: 1430 LSTLSNWVNEFAKWLPAATVVCYKGSPQQRKQLFR------------EEVADGHFNVLLT 1477
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ V+ D+G L ++ W Y I+DE R+KN S L H+ RR+L+TGTP+QN+L
Sbjct: 1478 TYEFVIRDKGSLKKLAWQYAIVDEGHRMKNNESKFSVTLGTHYNTRRRILLTGTPLQNSL 1537
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS-------- 266
ELWAL++F +P++F + + F F S G +Q S G+LS
Sbjct: 1538 PELWALLNFLLPAIFNSADTFDQWFNKPFASFGKTNTG---DQDDSSNGLLSNEERMLII 1594
Query: 267 --------AFMLRRTK-----------QKLVECGHLMLPPLTEITVLQKKVYASILRK-- 305
FMLRR K +K++ C E++ QK++Y I RK
Sbjct: 1595 HRLHELLRPFMLRRVKSEVLDQLPEKVEKVIRC---------ELSSWQKELYKQISRKIA 1645
Query: 306 -----------ELPKLLALSSRTANHQSLQNT-----------ASGKLVVLDLLLKKLYN 343
L ++ + NH L SGK+ +LD +L KL
Sbjct: 1646 GEARSNKNFNRGLNNVVMQLRKVCNHPYLFTKDGYHINEDLIKTSGKMELLDRMLPKLKA 1705
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
+GHRVL+F QMT+ + IL+D+ R + RLDGS A+ER + F+
Sbjct: 1706 AGHRVLMFTQMTKMMPILEDYFAYRGFLSLRLDGSTSADEREKRMYMFN----------- 1754
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
A + F+F++STRAGG+GLNL ADTVI ++ DWNP +D QA RAHRIGQ V
Sbjct: 1755 APDSPYFIFLLSTRAGGLGLNLATADTVIIFDSDWNPMMDLQAQDRAHRIGQKKDVRVFR 1814
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDR--EVKERTAVE 505
++T+ VEE I+ RA KL+++ VV D+ + KE ++E
Sbjct: 1815 IITQSPVEEKILSRATEKLQMNELVVEAGKFDKSGQAKEDNSLE 1858
>gi|146415248|ref|XP_001483594.1| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC
6260]
Length = 1367
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 285/530 (53%), Gaps = 80/530 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ +L N +L DEMGLGKT+Q I+FLS+L +++ GP L
Sbjct: 325 FIKNGELRDFQLTGLNWMAFLWLRNENGILADEMGLGKTVQTIAFLSWLIYARRQNGPHL 384
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PL W K+ P + + Y+G E R IR ++ + + F+
Sbjct: 385 VVVPLLTIPAWQETFEKWAPDVNCIYYLGNTESRATIR---------DYELYDGKKIKFN 435
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
V+LTTY+ +L D+ L I W + +DEA RLKN LY LR F + RLL+TGTP+
Sbjct: 436 VMLTTYEYILKDRNELGSIKWQFLAVDEAHRLKNAELSLYESLR-LFRVANRLLITGTPL 494
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNN+ EL AL +F +P F ++Q + + A + IKE L+ + ++L
Sbjct: 495 QNNIKELAALCNFLLPGRF-NIDQEID-----FETPDAEQEKYIKE----LQQNIKPYIL 544
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS--------- 315
RR K+ + + +LP T E++ +Q Y +I+ K L A +S
Sbjct: 545 RRLKKDVEK----LLPLKTERILRVELSDMQTDYYKNIITKNYSALNAGNSGLQISLLNV 600
Query: 316 -----RTANHQSLQNTA------------------------SGKLVVLDLLLKKLYNSGH 346
+ +NH L + A SGK+V+L+ LL +L GH
Sbjct: 601 MAELKKASNHPYLFDGAEERVLGTLTSSANRESVLRGMIMSSGKMVLLEQLLTRLRKEGH 660
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDIL D+L ++ Y+++RLDG I + +R +I HF+ A
Sbjct: 661 RVLIFSQMVRMLDILGDYLSIKGYAFQRLDGGIPSSQRRISIDHFN-----------APD 709
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+ FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV V+
Sbjct: 710 SRDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVS 769
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FG 515
+ T+EE I+ RA +K+ L + ++ + D K ++ +++L I+ FG
Sbjct: 770 KDTIEEEILERARKKMILEYAIISLGITDPSKKSKSEPNSNELSQILKFG 819
>gi|367008358|ref|XP_003678679.1| hypothetical protein TDEL_0A01360 [Torulaspora delbrueckii]
gi|359746336|emb|CCE89468.1| hypothetical protein TDEL_0A01360 [Torulaspora delbrueckii]
Length = 1450
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 278/506 (54%), Gaps = 74/506 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++F+S+L F++ GP L++ P
Sbjct: 373 GELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLVFARRQNGPHLIVVP 432
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W ++ P L+ + Y+G ++ R IR + + N+ F+VL+T
Sbjct: 433 LSTMPAWQETFERWAPDLDCICYMGNQKSRETIRDFEFYTNPQSKGKKNIK---FNVLMT 489
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L I W + +DEA RLKN S LY L + R+L+TGTP+QNN+
Sbjct: 490 TYEYILKDRSELGSIKWQFLAVDEAHRLKNAESSLYESLNS-LKVSNRMLITGTPLQNNI 548
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL+ F MP F T++Q + F++ ++ +E L L F+LRR K
Sbjct: 549 KELAALIDFLMPGRF-TIDQEID-FENQDNAQ--------EEYIRDLHERLQPFILRRLK 598
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 599 KDVEKS----LPGKTERILRVELSDVQTEYYKNILTKNYSALSAGAKGGHFSLLNVMSEL 654
Query: 315 SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L + A SGK+V+LD LL +L GHRVL
Sbjct: 655 KKASNHPYLFDNAEERVLEKFGDGSRSRGNILRGLIMSSGKMVLLDQLLTRLKKDGHRVL 714
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L+++ +++RLDG++ + +R +I HF+ A ++
Sbjct: 715 IFSQMVRILDILGDYLQIKGINFQRLDGTVPSAQRRISIEHFN-----------APDSND 763
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++ T
Sbjct: 764 FVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDT 823
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD 495
VEE ++ RA +K+ L + ++ V D
Sbjct: 824 VEEEVLERARKKMILEYAIISLGVTD 849
>gi|295674669|ref|XP_002797880.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280530|gb|EEH36096.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 1332
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 266/501 (53%), Gaps = 72/501 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL + GPFLV+
Sbjct: 433 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPFLVI 492
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G R+ Q + F VL
Sbjct: 493 VPLSTLTNWNLEFEKWAPSVSRIVYKGPPTTRK-------------QQQQAIRWGNFQVL 539
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS++ W + I+DE R+KN S L + L +++ RL++TGTP+QN
Sbjct: 540 LTTYEYIIKDRPVLSKVKWIHMIVDEGHRMKNAGSKLSSTLTQYYTTRYRLILTGTPLQN 599
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELW L++F +P++F ++ F F ++ R + E+ L +L
Sbjct: 600 NLPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLHKVLRP 659
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR----------------K 305
F+LRR K+ + + LP E + LQ K+Y ++ +
Sbjct: 660 FLLRRLKKDVEKD----LPEKQERVIKCRFSALQAKLYKQLVTHNKLVVSDGKGGKTGMR 715
Query: 306 ELPKLLALSSRTANH----QSLQNT-------------ASGKLVVLDLLLKKLYNSGHRV 348
L +L + NH +S+++ +GK +LD +L K SGHRV
Sbjct: 716 GLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDLIWRTAGKFELLDRILPKFKASGHRV 775
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F QMTQ ++I++DFL LR Y RLDGS ++++R ++ F+ A G++
Sbjct: 776 LMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKEFN-----------APGSE 824
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V + L+T +
Sbjct: 825 YFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSN 884
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
+VEE I+ RA+ KL + V+
Sbjct: 885 SVEERILERAQFKLDMDGKVI 905
>gi|254578924|ref|XP_002495448.1| ZYRO0B11638p [Zygosaccharomyces rouxii]
gi|238938338|emb|CAR26515.1| ZYRO0B11638p [Zygosaccharomyces rouxii]
Length = 1478
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/511 (36%), Positives = 280/511 (54%), Gaps = 76/511 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++F+S+L F++ GP L
Sbjct: 377 FIKNGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHL 436
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
++ PLS W K+ P+L + Y+G ++ R IR + + NV F+
Sbjct: 437 IVVPLSTMPSWQETFEKWAPELNCICYMGNQKSRDAIREYEFYTNPQAKGKKNVK---FN 493
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLTTY+ VL D+ S I W + +DEA RLKN S LY L + RLL+TGTP+
Sbjct: 494 VLLTTYEYVLKDRYEFSTIRWQFMAVDEAHRLKNAESSLYESLNS-LKVSNRLLITGTPL 552
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT-SLKGILSAFM 269
QNN+ EL AL++F MP F T++Q + F++ + +EQ+ L L F+
Sbjct: 553 QNNIKELAALVNFLMPGRF-TIDQEID-FEN---------QDDEQEQYIRDLHQRLQPFI 601
Query: 270 LRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS--------- 314
LRR K+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 602 LRRLKKDVEKS----LPSKTERILRVELSDVQTEYYRNILTKNYSALTAGAKGGHFSLLN 657
Query: 315 -----SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNS 344
+ +NH L + A SGK+V+LD LL +L
Sbjct: 658 IMNELKKGSNHPYLFDNAEERVLEKFGDGNRSRENILRGLIMSSGKMVLLDKLLTRLKKD 717
Query: 345 GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEA 404
GHRVL+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ A
Sbjct: 718 GHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSNQRRISIDHFN-----------A 766
Query: 405 GGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINL 464
++ FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ L
Sbjct: 767 PDSNDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRL 826
Query: 465 VTEHTVEEVIMRRAERKLRLSHNVVGDDVVD 495
V++ TVEE ++ RA +K+ L + ++ V D
Sbjct: 827 VSKDTVEEEVLERARKKMILEYAIISLGVTD 857
>gi|366987099|ref|XP_003673316.1| hypothetical protein NCAS_0A03690 [Naumovozyma castellii CBS 4309]
gi|342299179|emb|CCC66927.1| hypothetical protein NCAS_0A03690 [Naumovozyma castellii CBS 4309]
Length = 1457
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/506 (36%), Positives = 273/506 (53%), Gaps = 74/506 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++F+S+L +++ GP +V+ P
Sbjct: 380 GELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIYARRQNGPHIVVVP 439
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W K+ P L V+ Y+G + R IR + N+ F+VLLT
Sbjct: 440 LSTMPAWQETFDKWAPDLNVICYMGNQRSRDAIREFEFYTNPYAKGKKNIK---FNVLLT 496
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L I W + +DEA RLKN S LY L F + RLL+TGTP+QNN+
Sbjct: 497 TYEYILKDRSELGSIKWQFLAVDEAHRLKNAESSLYESLNS-FKVNNRLLITGTPLQNNI 555
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL++F MP F T++Q + F++ +E L L F+LRR K
Sbjct: 556 KELAALINFLMPGRF-TIDQEID-FENQDEEQ--------EEYIRDLHKRLQPFILRRLK 605
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP T E++ +Q + Y +IL K L A S
Sbjct: 606 KDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGSKGGHFSLLNIMSEL 661
Query: 315 SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L + A SGK+V+LD LL KL GHRVL
Sbjct: 662 KKASNHPYLFDNAEERVLKKFGDGQMSRENVLRGLIMSSGKMVLLDQLLNKLKKDGHRVL 721
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + +
Sbjct: 722 IFSQMVRMLDILGDYLSIKGITFQRLDGTVPSAQRRISIDHFNAPDSTDD---------- 771
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
VF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++ T
Sbjct: 772 -VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDT 830
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD 495
VEE ++ RA +K+ L + ++ V D
Sbjct: 831 VEEEVLERARKKMILEYAIISLGVTD 856
>gi|226290625|gb|EEH46109.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides brasiliensis Pb18]
Length = 1332
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 266/501 (53%), Gaps = 72/501 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL + GPFLV+
Sbjct: 433 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPFLVI 492
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G R+ Q + F VL
Sbjct: 493 VPLSTLTNWNLEFEKWAPSVSRIVYKGPPTTRK-------------QQQQAIRWGNFQVL 539
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS++ W + I+DE R+KN S L + L +++ RL++TGTP+QN
Sbjct: 540 LTTYEYIIKDRPVLSKVKWIHMIVDEGHRMKNAGSKLSSTLTQYYTTRYRLILTGTPLQN 599
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELW L++F +P++F ++ F F ++ R + E+ L +L
Sbjct: 600 NLPELWNLLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLHKVLRP 659
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR----------------K 305
F+LRR K+ + + LP E + LQ K+Y ++ +
Sbjct: 660 FLLRRLKKDVEKD----LPEKQERVIKCRFSALQAKLYKQLVTHNKLVVSDGKGGKTGMR 715
Query: 306 ELPKLLALSSRTANH----QSLQNT-------------ASGKLVVLDLLLKKLYNSGHRV 348
L +L + NH +S+++ +GK +LD +L K SGHRV
Sbjct: 716 GLSNMLMQLRKLCNHPFVFESVEDEMNPGRATNDLIWRTAGKFELLDRILPKFKASGHRV 775
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F QMTQ ++I++DFL LR Y RLDGS ++++R ++ F+ A G++
Sbjct: 776 LMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKEFN-----------APGSE 824
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V + L+T +
Sbjct: 825 YFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSN 884
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
+VEE I+ RA+ KL + V+
Sbjct: 885 SVEERILERAQFKLDMDGKVI 905
>gi|328771548|gb|EGF81588.1| hypothetical protein BATDEDRAFT_183, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 1186
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/524 (36%), Positives = 275/524 (52%), Gaps = 72/524 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ LK +Q++GL W++ Y +N +L DEMGLGKT+Q +S ++YL + PGPFLV+
Sbjct: 391 IGGTLKDYQIKGLQWMVSLYNNRLNGILADEMGLGKTIQTLSLITYLIERKKQPGPFLVI 450
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS WV E ++ P + + Y G +R+N+ S V F+VL
Sbjct: 451 VPLSTMTNWVIEFERWAPAVIKVVYKGSPIERKNL-------------ASVVRAGGFNVL 497
Query: 153 LTTYDVVL--MDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
LTT++ ++ D+ LS++ W + IIDE R+KN S L L +++ RL++TGTP+
Sbjct: 498 LTTFEYIINPKDRPVLSKVKWVHMIIDEGHRMKNAESRLSTTLAQYYSARYRLILTGTPL 557
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGIL 265
QNNL ELWAL++F +P VF ++ F F ++ R + E+ L +L
Sbjct: 558 QNNLPELWALLNFILPKVFNSVKSFDEWFNSPFSGTTGQDRIDLNEEEQLLIIRRLHKVL 617
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASIL-----------RKELP 308
F+LRR K K VE LP E V LQ ++Y I +K L
Sbjct: 618 RPFLLRRLK-KDVESE---LPDKVETIVKCPMSALQLRLYEQIRHRRFGGDGFSKKKVLN 673
Query: 309 KLLALSSRTANH-------QSLQNTA----------SGKLVVLDLLLKKLYNSGHRVLLF 351
L+ + NH + L N + +GK +LD +L K SGHR+L+F
Sbjct: 674 NLIMQFRKICNHPFVFDQVEELINPSKGTNDTLFRVAGKFELLDRILPKFKVSGHRILMF 733
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
QMTQ +DI++D+L R + Y RLDG + EER ++ F+ + F+
Sbjct: 734 FQMTQVMDIMEDYLRWRGHIYLRLDGHTKPEERTVMLKTFNRPD-----------DPPFI 782
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ V + L+T +VE
Sbjct: 783 FLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKKEVRILRLITSKSVE 842
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFG 515
E I+ RA+ KL + V+ D + ER E ++L +FG
Sbjct: 843 ETILARAQYKLDIDGKVIQAGKFDNKTSER---EREELLRSLFG 883
>gi|328772764|gb|EGF82802.1| hypothetical protein BATDEDRAFT_9456, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 1238
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/495 (36%), Positives = 275/495 (55%), Gaps = 68/495 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V EL+ +Q+ G++W+ + N +L DEMGLGKT+Q+ISFLSYL SQ GPFLV+
Sbjct: 168 VGGELRDYQLLGVNWMAHLWHRNRNGILADEMGLGKTIQSISFLSYLFHSQHVYGPFLVV 227
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E ++ P + V+ Y G+ R+ IR + + +++ + F+VL
Sbjct: 228 VPLSTIGAWQKEFKQWAPDINVICYHGDTASRQTIRNYEF-FIPSKTKEPRIR---FNVL 283
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTT++++L D+ L +I W + +DEA RLKN S L+ L++ F RLL+TGTP+QN
Sbjct: 284 LTTFELILKDKEHLGKIKWAFLAVDEAHRLKNSESQLHEALKD-FSTANRLLITGTPLQN 342
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
+ EL AL+ F MP F T D ++ KI+E LK + MLRR
Sbjct: 343 TVKELLALIQFLMPDQLQEFQDFEITVGDE------EQQEKIRELQIKLKDL----MLRR 392
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKL--------------LA 312
K+ + + LP +E ++ LQ + Y ++ K L +A
Sbjct: 393 LKKDVEKS----LPSKSERILRVELSPLQLEYYKAVFTKNFETLNRGTAGGKQVSLQNIA 448
Query: 313 LS-SRTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQM 354
+ + +NH L + A SGK+V+LD LL L+ HRVL+F+QM
Sbjct: 449 MELKKASNHPYLFDGAEPPNMSREDQLKGIIMNSGKMVLLDKLLASLHEGQHRVLIFSQM 508
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
+ L+IL D+L R Y+++RLDG+ ++E R ++ HF+ A G+ F F++
Sbjct: 509 VRMLNILSDYLSYRGYTFQRLDGTTQSEVRKRSMEHFN-----------AAGSTDFAFLL 557
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STRAGG+GLNL ADTVI ++ DWNPQ D QA+ RAHRIGQ N V +++ T+EE I
Sbjct: 558 STRAGGLGLNLATADTVILFDSDWNPQNDLQAIARAHRIGQKNTVNVYRFLSKDTIEEDI 617
Query: 475 MRRAERKLRLSHNVV 489
+ RA+RK+ L ++++
Sbjct: 618 IERAKRKMVLEYSII 632
>gi|82914730|ref|XP_728823.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485366|gb|EAA20388.1| Arabidopsis thaliana BRAHMA ortholog-related [Plasmodium yoelii
yoelii]
Length = 1529
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 275/520 (52%), Gaps = 83/520 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP------ 86
+ L +Q++GL WL+ Y +N +L DEMGLGKT+Q IS +YLK +M
Sbjct: 625 IGGNLMKYQLDGLEWLVSLYNNNLNGILADEMGLGKTVQTISLFAYLKELKMEENCENNI 684
Query: 87 --------GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ 138
G +++ PLS WV+E K+ P L+V+ Y G + +R+NI + + E+
Sbjct: 685 NDEMNNQIGKNIIIVPLSTLPNWVNEFEKWCPTLKVIIYKGNKNERKNINKNLLEN---- 740
Query: 139 SQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFL 198
+D+ LTT+D+++ ++ L +I W Y IIDE R+KN +S L+++L F+
Sbjct: 741 ---------NYDICLTTFDIIIKEKNILGKISWNYIIIDEGHRIKNDNSKLHSILS-LFI 790
Query: 199 MPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ- 257
R+L+TGTP+QNN+ ELWAL++F +P +F + F F + + +E+
Sbjct: 791 SKYRILLTGTPLQNNMKELWALLNFLLPKIFSSSTDFQQWFSFPLSNEQTVYETMTEEEE 850
Query: 258 ---FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELP 308
L IL FMLRR K+ ++E LP E +++ QK +Y I K
Sbjct: 851 LLIINRLHTILLPFMLRRLKKDVLE----FLPKKYEYNIYVQLSLYQKLLYKQIENKNFK 906
Query: 309 KLLALSSRTANHQSLQNT--------------------------ASGKLVVLDLLLKKLY 342
++ S T N+++ QNT +SGK VLD +L KL
Sbjct: 907 QIN--SDGTLNNKTFQNTIMQLRKIVNHPFLFTHDYDINDFVIKSSGKFEVLDRMLPKLI 964
Query: 343 NSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHF----------- 391
H++LLF QMT+ +DI+ D+ ELRKY Y RLDGS+ +R I F
Sbjct: 965 KFKHKILLFCQMTKVMDIISDYFELRKYKYHRLDGSVSLSDRRDIIDSFNQNKFVKNSDN 1024
Query: 392 SVQSAIERLYSEAGG--NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQR 449
S Q+ + L + +D +F++STR+G +GLNL AADTVI ++ D+NP D QA+ R
Sbjct: 1025 SSQNKNDSLLLDPASKLDDTMIFILSTRSGSLGLNLQAADTVIIFDSDFNPHQDIQAMCR 1084
Query: 450 AHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
HRIGQ N V +T +VEE+I ++A+ KL ++ V+
Sbjct: 1085 CHRIGQKNVVKVFRFITLSSVEELIFQKAKDKLNINDKVI 1124
>gi|342874224|gb|EGU76265.1| hypothetical protein FOXB_13234 [Fusarium oxysporum Fo5176]
Length = 1421
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/535 (34%), Positives = 281/535 (52%), Gaps = 79/535 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A V +LK +QV+GL W+I Y +N +L DEMGLGKT+Q IS ++YL +
Sbjct: 535 TEQANMLVGGKLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKQQ 594
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E ++ P + + Y G N R+ + +++
Sbjct: 595 AGPYLVIVPLSTLTNWNLEFERWAPSVSRIVYKGPP----NARKQQQDKIRQGG------ 644
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L +++++ RL++
Sbjct: 645 ---FQVLLTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNSNSKLSFTIQQYYHTRFRLIL 701
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNLSELWA+++F +P++F + F F ++ + ++ E+
Sbjct: 702 TGTPLQNNLSELWAMLNFVLPNIFKSATTFDEWFNTPFANTGGQDKMELTEEEQILVIRR 761
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASI------------ 302
L +L F+LRR K+ + + LP TE + LQ K+Y +
Sbjct: 762 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQSKLYKQMVTHNRLVVSDGK 817
Query: 303 ---------------LRK--ELPKLLALSSRTANHQSLQNT----ASGKLVVLDLLLKKL 341
LRK P + + N S+ N +GK +LD +L K
Sbjct: 818 GGKTGARGLSNMIMQLRKLCNHPFVFDVVENVMNPLSISNDLLWRTAGKFELLDRILPKY 877
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+GHRVL+F QMT +DI++D+L +++ Y RLDG+ +++ER +R F+
Sbjct: 878 QATGHRVLMFFQMTAIMDIMEDYLRYKRFEYLRLDGTTKSDERSDLLREFN--------- 928
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
A + F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 929 --APDSKYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 986
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+ L++ ++VEE I+ RA KL + V+ DR+ RT +ET D+
Sbjct: 987 LRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLETADM 1041
>gi|366996032|ref|XP_003677779.1| hypothetical protein NCAS_0H01200 [Naumovozyma castellii CBS 4309]
gi|342303649|emb|CCC71430.1| hypothetical protein NCAS_0H01200 [Naumovozyma castellii CBS 4309]
Length = 1065
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/496 (37%), Positives = 269/496 (54%), Gaps = 75/496 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ L+ +Q++GL+WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 128 INGTLRNYQIQGLNWLVSLHKSKLAGILADEMGLGKTLQTISFLGYLRYVEKIPGPFLVI 187
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ K+TP++ G++E+R + VK++ + FD++
Sbjct: 188 APKSTLNNWLREINKWTPEVNAFILQGDKEERAQL-------VKDK-----LLACDFDIV 235
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 236 VASYEIIIREKSAFRKIDWQYIIIDEAHRIKNEESLLSQVLRE-FTSSNRLLITGTPLQN 294
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F K K L +L F+LRR
Sbjct: 295 NLHELWALLNFLLPDIFSDSQDFDDWFSSETTEEDQEKVVK------QLHTVLQPFLLRR 348
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K VE L P E+ + +QKK Y IL K++ +LL +
Sbjct: 349 LKND-VETSLL---PKQELNLYVGMSNMQKKWYKQILEKDIDAVNGSNVNKESKTRLLNI 404
Query: 314 S---SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQ 353
+ NH L + A G D L +YNS G RVL+F+Q
Sbjct: 405 VMQLRKCCNHPYLFDGAEPGPPYTTDEHL--VYNSAKLKVLDKLLKKMKEEGSRVLIFSQ 462
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R Y Y R+DGS E+R AI Y+E G F+F+
Sbjct: 463 MSRVLDILEDYCFFRGYEYCRIDGSTDHEDRIRAIDE----------YNEPGSK-KFIFL 511
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL +A+ V+ ++ DWNPQ D QA+ RAHRIGQ V LVT+++VEE
Sbjct: 512 LTTRAGGLGINLTSANIVVLFDSDWNPQADLQAMDRAHRIGQKRQVKVFRLVTDNSVEEK 571
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA +KLRL V+
Sbjct: 572 ILERATQKLRLDQLVI 587
>gi|374108737|gb|AEY97643.1| FAFL040Wp [Ashbya gossypii FDAG1]
Length = 1078
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 190/520 (36%), Positives = 276/520 (53%), Gaps = 75/520 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V L+P+QV+G++WL+ + + +L DEMGLGKTLQ I+FL YL++ + GPFLV+
Sbjct: 132 VDGRLRPYQVQGVNWLVSLHKNNLAGILADEMGLGKTLQTITFLGYLRYIEKKRGPFLVI 191
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W E+ ++TP ++ G++E+R + +E+ N FDV
Sbjct: 192 APKSTLNNWQREINRWTPDVDAFILQGDKEERARL-------CQERLLACN-----FDVA 239
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ +I W Y +IDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 240 IASYEIIIREKASFKKIDWEYIVIDEAHRIKNEESMLSQVLRE-FSSRNRLLITGTPLQN 298
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F +S + KI +Q L IL F+LRR
Sbjct: 299 NLHELWALLNFLLPDIFSDSAAFDEWFS---SEASDDDKDKIVKQ---LHTILQPFLLRR 352
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K + L P E+ + +Q+K Y IL K+L +LL +
Sbjct: 353 IKSDV----ETSLLPKKELNLYVGMSSMQRKWYKQILEKDLDAVNGSNGSKESKTRLLNI 408
Query: 314 S---SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQ 353
+ NH L + A G D L +YNS G RVL+F+Q
Sbjct: 409 MMQLRKCCNHPYLFDGAEPGPPYTTDEHL--VYNSAKLKVLDKLLKKLKEDGSRVLIFSQ 466
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R Y Y R+DGS E+R AI ++ A + F+F+
Sbjct: 467 MSRLLDILEDYCYFRGYEYCRIDGSTAHEDRIEAIDEYN-----------APDSRKFIFL 515
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE
Sbjct: 516 LTTRAGGLGINLTTADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEK 575
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
I+ RA +KLRL V+ KE D L S+I
Sbjct: 576 ILERATQKLRLDQLVIQQGRTSISKKENAKDAKDALLSMI 615
>gi|307776522|pdb|3MWY|W Chain W, Crystal Structure Of The Chromodomain-atpase Portion Of
The Yeast Chd1 Chromatin Remodeler
Length = 800
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 281/507 (55%), Gaps = 76/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + G N +L DEMGLGKT+Q ++F+S+L F++ GP +++ P
Sbjct: 235 GELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVP 294
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLL 153
LS W+ K+ P L + Y+G ++ R IR Y + + + + + + F+VLL
Sbjct: 295 LSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKT----MKFNVLL 350
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+ +L D+ L I W + +DEA RLKN S LY L F + R+L+TGTP+QNN
Sbjct: 351 TTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNS-FKVANRMLITGTPLQNN 409
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ EL AL++F MP F T++Q + F++ +E L + F+LRR
Sbjct: 410 IKELAALVNFLMPGRF-TIDQEID-FENQDEEQ--------EEYIHDLHRRIQPFILRRL 459
Query: 274 KQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS------------- 314
K+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 460 KKDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNE 515
Query: 315 -SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRV 348
+ +NH L + A SGK+V+LD LL +L GHRV
Sbjct: 516 LKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRV 575
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + ND
Sbjct: 576 LIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS----------ND 625
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++
Sbjct: 626 -FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKD 684
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVD 495
TVEE ++ RA +K+ L + ++ V D
Sbjct: 685 TVEEEVLERARKKMILEYAIISLGVTD 711
>gi|302916021|ref|XP_003051821.1| chromatin remodeling complex SWI/SNF, component SWI2 and related
ATPase [Nectria haematococca mpVI 77-13-4]
gi|256732760|gb|EEU46108.1| chromatin remodeling complex SWI/SNF, component SWI2 and related
ATPase [Nectria haematococca mpVI 77-13-4]
Length = 1427
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 185/535 (34%), Positives = 277/535 (51%), Gaps = 79/535 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A V +LK +QV+GL W+I Y +N +L DEMGLGKT+Q IS ++YL +
Sbjct: 543 TEQANMLVGGKLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKQQ 602
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E ++ P + + Y G R+ Q +
Sbjct: 603 AGPYLVIVPLSTLTNWNLEFERWAPSVSRIVYKGPPNARKQ-------------QQDKIR 649
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ V+ D+ LS+I W + IIDE R+KN +S L +++++ RL++
Sbjct: 650 QGKFQVLLTTYEYVIKDRPVLSKIKWFHMIIDEGHRMKNSNSKLSATIQQYYHTRFRLIL 709
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNL+ELWA+++F +P++F + F F ++ + ++ E+
Sbjct: 710 TGTPLQNNLAELWAMLNFVLPNIFKSAKTFDDWFNTPFANTGGQDKMELTEEEQILVIRR 769
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASI------------ 302
L +L F+LRR K+ + + LP TE + LQ K+Y +
Sbjct: 770 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQSKLYKQMVTHNKLVVSDGK 825
Query: 303 ---------------LRK--ELPKLLALSSRTANHQSLQNT----ASGKLVVLDLLLKKL 341
LRK P + + N S+ N +GK +LD +L K
Sbjct: 826 GGKTGARGLSNMIMQLRKLCNHPFVFDVVENVMNPLSISNDLLWRTAGKFELLDRILPKY 885
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
SGHRVL+F QMT +DI++D+L ++ Y RLDG+ +++ER +R F+
Sbjct: 886 QASGHRVLMFFQMTAIMDIMEDYLRYKRVEYLRLDGTTKSDERSDLLREFN--------- 936
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
A + F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 937 --APDSKYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 994
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+ L++ ++VEE I+ RA KL + V+ DR+ RT +ET D+
Sbjct: 995 LRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLETADM 1049
>gi|255718763|ref|XP_002555662.1| KLTH0G14498p [Lachancea thermotolerans]
gi|238937046|emb|CAR25225.1| KLTH0G14498p [Lachancea thermotolerans CBS 6340]
Length = 1436
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/506 (36%), Positives = 276/506 (54%), Gaps = 74/506 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++F+S+L +++ GP LV+ P
Sbjct: 355 GELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIYARRQNGPHLVVVP 414
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W K+ P L + ++G ++ R IR + + Q++ + F+VLLT
Sbjct: 415 LSTMPAWQETFEKWAPDLNCIYFMGNQKSRDAIRENEF-YTNPQAKTKKHA--KFNVLLT 471
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L + W + +DEA RLKN S LY L F + RLL+TGTP+QNN+
Sbjct: 472 TYEYILKDRAELGAMKWQFLAVDEAHRLKNSESSLYESLNS-FKVANRLLITGTPLQNNI 530
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL++F MP F T++Q + + + I+E L L F+LRR K
Sbjct: 531 KELAALVNFLMPGRF-TIDQEID-----FENQDEEQETYIRE----LHSRLQPFILRRLK 580
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP T E++ +Q Y +IL K L A S
Sbjct: 581 KDVEKS----LPSKTERILRVELSDVQTDYYKNILTKNYSALSAGSKGAHFSLLNIMNEL 636
Query: 315 SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L + A SGK+V+LD LL +L GHRVL
Sbjct: 637 KKASNHPYLFDMAEDRVLAKFGDGKMSRENILRGLIMSSGKMVLLDQLLTRLKKDGHRVL 696
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L ++ +Y+RLDG++ + +R +I HF+ + ND
Sbjct: 697 IFSQMVRMLDILGDYLNIKGVNYQRLDGTVPSAQRRISIDHFNSPDS----------ND- 745
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ V++ T
Sbjct: 746 FVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDT 805
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD 495
VEE ++ RA +K+ L + ++ V D
Sbjct: 806 VEEEVLERARKKMILEYAIISLGVTD 831
>gi|156843751|ref|XP_001644941.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156115595|gb|EDO17083.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 1507
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 202/581 (34%), Positives = 310/581 (53%), Gaps = 84/581 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++FLS+L +++ GP L
Sbjct: 397 FIKNGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFLSWLVYARRQNGPHL 456
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W K++P L + Y+G ++ R IR + + N+ F+
Sbjct: 457 VVVPLSTMPAWQETFEKWSPDLNCIYYMGNQKSRDAIREYEFYTNPQAKGKKNIK---FN 513
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLTTY+ +L D+ L + W + +DEA RLKN S LY L F + RLL+TGTP+
Sbjct: 514 VLLTTYEYILKDRSELGSVKWQFLAVDEAHRLKNAESSLYESLNS-FKVSNRLLITGTPL 572
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT-SLKGILSAFM 269
QNN+ EL AL++F MP F T++Q + F++ + + +E + L L F+
Sbjct: 573 QNNIKELAALVNFLMPGRF-TIDQEID-FEN---------QDEEQEHYIRDLHQRLQPFI 621
Query: 270 LRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS--------- 314
LRR K+ + + LP T E++ +Q Y +IL K L A +
Sbjct: 622 LRRLKKDVEKS----LPSKTERILRVELSDVQTDYYKNILTKNYSALTAGTKGGHFSLLN 677
Query: 315 -----SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNS 344
+ +NH L + A SGK+V+LD LL +L
Sbjct: 678 VMTELKKASNHPYLFDYAEERVLQKFGDGNMSRENILRGLIMSSGKMVLLDQLLTRLKRD 737
Query: 345 GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEA 404
GHRVL+F+QM + LDI+ D+L ++ +++RLDG++ + +R AI HF+ +
Sbjct: 738 GHRVLIFSQMVRMLDIMGDYLSIKGINFQRLDGTVPSAQRRIAIDHFNAPDS-------- 789
Query: 405 GGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINL 464
ND VF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ L
Sbjct: 790 --NDD-VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRL 846
Query: 465 VTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREV----KERTAVETDDLRSIIFGL-HLF 519
V++ TVEE ++ RA +K+ L + ++ V D +V KE +A E ++ + FG ++F
Sbjct: 847 VSKDTVEEEVLERARKKMILEYAIISLGVTDGKVSNKSKEPSAGELSEI--LKFGAGNMF 904
Query: 520 DPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKF 560
K N ++ +DL L + + E I S G +F
Sbjct: 905 AAKD-NQKKLEDLNLDDVLNHAEDHITTPDLGESHLGGEEF 944
>gi|45198479|ref|NP_985508.1| AFL040Wp [Ashbya gossypii ATCC 10895]
gi|44984430|gb|AAS53332.1| AFL040Wp [Ashbya gossypii ATCC 10895]
Length = 1086
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 190/520 (36%), Positives = 276/520 (53%), Gaps = 75/520 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V L+P+QV+G++WL+ + + +L DEMGLGKTLQ I+FL YL++ + GPFLV+
Sbjct: 140 VDGRLRPYQVQGVNWLVSLHKNNLAGILADEMGLGKTLQTITFLGYLRYIEKKRGPFLVI 199
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W E+ ++TP ++ G++E+R + +E+ N FDV
Sbjct: 200 APKSTLNNWQREINRWTPDVDAFILQGDKEERARL-------CQERLLACN-----FDVA 247
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ +I W Y +IDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 248 IASYEIIIREKASFKKIDWEYIVIDEAHRIKNEESMLSQVLRE-FSSRNRLLITGTPLQN 306
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F +S + KI +Q L IL F+LRR
Sbjct: 307 NLHELWALLNFLLPDIFSDSAAFDEWFS---SEASDDDKDKIVKQ---LHTILQPFLLRR 360
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K + L P E+ + +Q+K Y IL K+L +LL +
Sbjct: 361 IKSDV----ETSLLPKKELNLYVGMSSMQRKWYKQILEKDLDAVNGSNGSKESKTRLLNI 416
Query: 314 S---SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQ 353
+ NH L + A G D L +YNS G RVL+F+Q
Sbjct: 417 MMQLRKCCNHPYLFDGAEPGPPYTTDEHL--VYNSAKLKVLDKLLKKLKEDGSRVLIFSQ 474
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R Y Y R+DGS E+R AI ++ A + F+F+
Sbjct: 475 MSRLLDILEDYCYFRGYEYCRIDGSTAHEDRIEAIDEYN-----------APDSRKFIFL 523
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE
Sbjct: 524 LTTRAGGLGINLTTADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEK 583
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
I+ RA +KLRL V+ KE D L S+I
Sbjct: 584 ILERATQKLRLDQLVIQQGRTSISKKENAKDAKDALLSMI 623
>gi|255565329|ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis]
gi|223537108|gb|EEF38742.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis]
Length = 2257
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 184/506 (36%), Positives = 272/506 (53%), Gaps = 67/506 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
L PHQ+E L+WL R + NV+L DEMGLGKT+ A +FLS L F + P LVL P
Sbjct: 669 GSLFPHQLEALNWLRRCWHKSKNVILADEMGLGKTVSACAFLSSLYFEFRASLPCLVLVP 728
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W++E A + P L V+ Y G + R IR+ + + + F+VLLT
Sbjct: 729 LSTMPNWLAEFALWAPNLNVVEYHGCAKARAIIRQYEWHASDPKKTNQKTASYKFNVLLT 788
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++VL D L +PW ++DE RLKN S L+++L F R+L+TGTP+QNN+
Sbjct: 789 TYEMVLADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNT-FSFQHRVLLTGTPLQNNI 847
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
E++ L++F P+ F +L+ F F D + E+ LK +++ MLRR K
Sbjct: 848 GEMYNLLNFLQPASFPSLSSFEEKFNDLTTA----------EKVEELKKLVAPHMLRRLK 897
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKE----------LPKLLALS---- 314
+ ++ +PP TE +T +Q + Y ++L K +P+ L+
Sbjct: 898 KDAMQ----NIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVPQQSMLNIVMQ 953
Query: 315 -SRTANH-----------------QSLQNTASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH ++ AS KL VL +LK LY GHRVL+F+QMT+
Sbjct: 954 LRKICNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTVLHSMLKALYKEGHRVLIFSQMTK 1013
Query: 357 TLDILQDFL--ELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
LD+L+D+L E +YER+DGS+ +R A+I F+ + FVF++
Sbjct: 1014 LLDVLEDYLTIEFGPKTYERVDGSVSVSDRQASISRFNQDKS------------RFVFLL 1061
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STR+ G+G+NL ADTV+ Y+ D+NP D QA+ RAHRIGQ N +L LV +VEE I
Sbjct: 1062 STRSCGLGINLATADTVVIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERI 1121
Query: 475 MRRAERKLRLSHNVVGDDVVDREVKE 500
++ A++KL L V +EV++
Sbjct: 1122 LQLAKKKLMLDQLFVNKSGSQKEVED 1147
>gi|356563853|ref|XP_003550172.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
[Glycine max]
Length = 1059
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 197/546 (36%), Positives = 299/546 (54%), Gaps = 74/546 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 180 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 239
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G ++R++IR + K FDV
Sbjct: 240 APKSTLGNWMNEIRRFCPVLRAVKFLGNPDERKHIREELLVAGK------------FDVC 287
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++V+ ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 288 VTSFEMVIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LYNTNYRLLITGTPLQN 346
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + E L +L F+LRR
Sbjct: 347 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDE-------HEVVQQLHKVLRPFLLRR 399
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ +QK+ Y ++L+K+L +LL ++
Sbjct: 400 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQL 455
Query: 315 SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L T +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 456 RKCCNHPYLFQGAEPGPPFTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 515
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L Y Y R+DG+ ++R A+I F+ G++ FVF++STRAG
Sbjct: 516 ILEDYLMFCGYQYCRIDGNTGGDDRDASIEAFN-----------KPGSEKFVFLLSTRAG 564
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 565 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 624
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHL-FDPK--AINNEESDDLRLSG 536
+KL L V+ R +++T + + L+ + FG + F K I +E+ D + G
Sbjct: 625 KKLALDALVIQQ---GRLAEQKTVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKG 681
Query: 537 LNSMVE 542
+ E
Sbjct: 682 EEATAE 687
>gi|145493367|ref|XP_001432679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399793|emb|CAK65282.1| unnamed protein product [Paramecium tetraurelia]
Length = 1021
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 181/494 (36%), Positives = 274/494 (55%), Gaps = 71/494 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L +Q++GL+WLI G+N +L D+MGLGKT+Q I+ L ++K + GP L++ P
Sbjct: 120 GKLTGYQLQGLNWLISMQEAGLNGILADQMGLGKTIQTIALLGFMKQFKNVSGPHLIVGP 179
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W E++++ PK VL+ + E R + + ++S +DV++
Sbjct: 180 LSTIPNWERELSEWLPKCSVLKMMATEEWRHDFNK-------------HLSKKDYDVIVA 226
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR-RLLMTGTPIQNN 213
+Y+ V+ ++ L++ + Y IIDEA +LKN S+ + L+ L R RLL+TGTP+QNN
Sbjct: 227 SYECVINNERILNKYRFEYLIIDEAHKLKNEESLFFTTLKR--LSSRFRLLLTGTPLQNN 284
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFK-DAVHSSSAPKRGKIKEQFTSL----KGILSAF 268
ELW+L+++ MP +F + F F + + S + K +++ ++ K I+ AF
Sbjct: 285 PHELWSLLNYLMPQLFTSSEAFDQWFYINKLMSEKEILQEKYEKRNMNMIEKAKSIIQAF 344
Query: 269 MLRRTKQKLVECGHLMLPPLTEI----------------TVLQKKVYASILRKELPKLLA 312
MLRRTK ++ L +PP EI +L KKV +K L +L
Sbjct: 345 MLRRTKSEVA----LDIPPKKEIHLYVQMTPLQKSHYRNMILNKKVVGVTTQKSLMNILI 400
Query: 313 LSSRTANH-----------------QSLQNTASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ H ++N SGKL VLD+ LKKLYN H+V+LF+Q T
Sbjct: 401 QLRKICQHLYMFPELEDRDQPSLGEHLIEN--SGKLKVLDMFLKKLYNENHKVILFSQFT 458
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
LDIL+D+L RKY Y RLDGS E R IR+F + +D F+F++S
Sbjct: 459 SLLDILEDYLNYRKYKYCRLDGSTPIEVRDENIRNF-----------QNPDSDLFIFLLS 507
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+ L AADTVI Y+ D+NPQ+D+QA+ RAHRIGQ +V+ L+ + TVEE I+
Sbjct: 508 TRAGGLGITLTAADTVIIYDSDFNPQLDQQAMDRAHRIGQKKNVMVYRLICQSTVEEKII 567
Query: 476 RRAERKLRLSHNVV 489
R + KLR ++
Sbjct: 568 ERQQIKLRWEQMII 581
>gi|290978132|ref|XP_002671790.1| predicted protein [Naegleria gruberi]
gi|284085362|gb|EFC39046.1| predicted protein [Naegleria gruberi]
Length = 1069
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 186/495 (37%), Positives = 281/495 (56%), Gaps = 69/495 (13%)
Query: 28 AAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPG 87
+ +F L+ +Q++G++W+IR + GVN +L DEMGLGKT+Q +++++YLKF + G
Sbjct: 191 SPKFIENTTLRSYQIDGVNWMIRLHDRGVNGILADEMGLGKTVQTLTWIAYLKFIRRIRG 250
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL 147
P LV+ P SV WV++ ++ P L+VL++ G+++QRR I KE+S +
Sbjct: 251 PHLVIVPKSVIPNWVNQANQWCPSLQVLKFHGDKDQRREI--------KEKSLVGG---- 298
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
F++++T+Y+ + ++ L++ W IIDEA R+KN +S+L +R F RLL+TG
Sbjct: 299 KFEIVVTSYETAIKEKAALNKFRWYSIIIDEAHRIKNENSILSQSVR-VFDCQYRLLLTG 357
Query: 208 TPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTS-LKGILS 266
TP+QNNL ELW+L++F +P VF + + F + F K G+ + L +L
Sbjct: 358 TPLQNNLHELWSLLNFLLPDVFRSADDFDTWFN--------LKEGQAETHIIDQLHKVLK 409
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELP--------KLLA 312
F+LRR K ++ +PP EI V LQK+ Y SIL K+L +LL
Sbjct: 410 PFLLRRLKTEV----KTDIPPKKEIYVECGLSKLQKEWYRSILTKDLNSIKGGEKVRLLN 465
Query: 313 LS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQM 354
+ + NH L + A SGK+ ++D LLKKL RVL+F QM
Sbjct: 466 VVMQLRKCCNHPYLFDGAEPGPPYTLGDHLMNNSGKMYLVDKLLKKLKEQNSRVLIFTQM 525
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
T+ LDIL+D+ LR Y Y R+DG +E R + F+ + G+ F+F++
Sbjct: 526 TRMLDILEDYCYLRNYEYCRIDGQTSSELREQHMDEFNKE-----------GSSKFIFLL 574
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STRAGG+G+NL ADTVI Y+ DWNPQ D QA R HRIGQ V L+++ ++EE I
Sbjct: 575 STRAGGLGINLATADTVIIYDSDWNPQADLQAQDRCHRIGQKKPVNVYRLISKDSIEEKI 634
Query: 475 MRRAERKLRLSHNVV 489
+RA +KL L V+
Sbjct: 635 YQRAVKKLYLDAVVI 649
>gi|150866039|ref|XP_001385507.2| transcriptional regulator [Scheffersomyces stipitis CBS 6054]
gi|149387295|gb|ABN67478.2| transcriptional regulator [Scheffersomyces stipitis CBS 6054]
Length = 1414
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 292/555 (52%), Gaps = 85/555 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q +SFLS+L +S+ GP +
Sbjct: 344 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYSRRQNGPHI 403
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W K++P + + Y+G + R+ IR YE SN P F+
Sbjct: 404 VVVPLSTIPAWQETFEKWSPDVNCVYYLGNTQARKTIRD--YEFYG-----SNNKP-KFN 455
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
+LLTTY+ +L D+ L W + +DEA RLKN S LY L+ F + RLL+TGTP+
Sbjct: 456 ILLTTYEYILKDRNELGAFKWQFLAVDEAHRLKNADSSLYESLKS-FKVANRLLITGTPL 514
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGI---LSA 267
QNN+ EL AL++F MP F + D +EQ +K + +
Sbjct: 515 QNNIKELAALVNFLMPGKFDIEQEIDFETPD-------------EEQELYIKDLQKKIQP 561
Query: 268 FMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS------- 314
F+LRR K+ + + LP T E++ +Q + Y +I+ K L A +
Sbjct: 562 FILRRLKKDVEKS----LPSKTERILRVELSDIQTEYYKNIITKNYSALNAGNKGAQISL 617
Query: 315 -------SRTANHQSLQNTA-----------------------SGKLVVLDLLLKKLYNS 344
+ +NH L + A SGK+V+L+ LL +L
Sbjct: 618 LNVMSELKKASNHPYLFDGAENRVLAKVGSATRDNILRGMIMSSGKMVLLEQLLTRLKKE 677
Query: 345 GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEA 404
GHRVL+F+QM + LDIL D+L ++ Y ++RLDG I + +R +I HF+ + +
Sbjct: 678 GHRVLIFSQMVRILDILGDYLSIKGYQFQRLDGGIPSAQRRISIDHFNAPESKD------ 731
Query: 405 GGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINL 464
F+F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV
Sbjct: 732 -----FIFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRF 786
Query: 465 VTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE-RTAVETDDLRSII-FGLHLFDPK 522
V++ TVEE I+ RA +K+ L + ++ + D K+ +T T +L I+ FG +
Sbjct: 787 VSKDTVEEQILERARKKMILEYAIISLGITDPNSKKSKTEPSTGELSQILKFGAGNMFKE 846
Query: 523 AINNEESDDLRLSGL 537
N ++ +DL L +
Sbjct: 847 NDNQKKLEDLNLDDV 861
>gi|448112637|ref|XP_004202147.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
gi|359465136|emb|CCE88841.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
Length = 1377
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 196/555 (35%), Positives = 294/555 (52%), Gaps = 86/555 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q +SFLS+L +++ GP L
Sbjct: 338 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPHL 397
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W K+ P + + Y+G R+ IR + K+ L F+
Sbjct: 398 VVVPLSTITSWQETFEKWAPDVNCVYYLGNSAARKTIRDYEFYQNKK---------LKFN 448
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
+LLTTY+ VL D+ L I W + +DEA RLKN S LY L+ F + RLL+TGTP+
Sbjct: 449 ILLTTYEYVLKDRSELGSIKWQFLAVDEAHRLKNEESSLYESLK-SFKVGNRLLITGTPL 507
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF-TSLKGILSAFM 269
QNN+ EL AL +F MP F + P R +EQ+ L+ + F+
Sbjct: 508 QNNIKELNALCNFLMPGRFNIGQEI---------DFETPNRE--QEQYIKDLQKNIQPFI 556
Query: 270 LRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS--------- 314
LRR K+ + + LP + E++ LQ + Y +IL K L A +
Sbjct: 557 LRRLKKDVEKS----LPSKSERILRVELSDLQTEYYRNILTKNYSALNAGNKGSQISLLN 612
Query: 315 -----SRTANHQSLQNTA-----------------------SGKLVVLDLLLKKLYNSGH 346
+ +NH L + A SGK+V+L+ LL +L GH
Sbjct: 613 VVSELKKASNHPYLFDGAEERALAKASSTSRDNILRGIIMSSGKMVLLEQLLNRLKKEGH 672
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDIL D+L ++ ++RLDG + + +R +I HF+ A
Sbjct: 673 RVLIFSQMVRMLDILGDYLSIKGLQFQRLDGGVPSSQRRISIDHFN-----------APD 721
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+ FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV V+
Sbjct: 722 SKDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVS 781
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVDR-EVKERTAVETDDLRSII-FGL-HLFDPKA 523
+ T+EE I+ RA +K+ L + ++ + D+ K ++ T +L I+ FG ++F KA
Sbjct: 782 KDTIEEEILERARKKMILEYAIISLGITDKTSQKSKSEPSTGELSEILKFGAGNMF--KA 839
Query: 524 INNEES-DDLRLSGL 537
+N++ +DL L +
Sbjct: 840 NDNQKKLEDLNLDDV 854
>gi|440639556|gb|ELR09475.1| hypothetical protein GMDG_00657 [Geomyces destructans 20631-21]
Length = 1423
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 271/503 (53%), Gaps = 76/503 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL ++ GPFLV+
Sbjct: 538 VGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEAKKQNGPFLVI 597
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVG----EREQRRNIRRTMYEHVKEQSQMSNVSPLP 148
PLS W E K+ P ++ + Y G +EQ++ IR Y H
Sbjct: 598 VPLSTLTNWNLEFEKWAPSVKRIVYKGSPLARKEQQQEIR---YGH-------------- 640
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN S L L +++ RL++TGT
Sbjct: 641 FQVLLTTYEYIIKDRPVLSKIKWIHMIIDEGHRMKNAKSKLSGTLSQYYSTRYRLILTGT 700
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKG 263
P+QNNL ELWAL++F +P++F ++ F F ++ + ++ E+ L
Sbjct: 701 PLQNNLPELWALLNFVLPTIFKSVKSFDEWFNTPFANTGGQDKMELTEEEQILVIRRLHK 760
Query: 264 ILSAFMLRRTK----QKLVECGHLMLPPLTEITVLQKKVYASILR--------------- 304
+L F+LRR K + L E ++ T + LQ ++Y ++
Sbjct: 761 VLRPFLLRRLKKDVEKDLPEKSEKVIK--TRFSALQARLYKQMVTHNKLVVSDGKGGKTG 818
Query: 305 -KELPKLLALSSRTANH----------QSLQNTA-------SGKLVVLDLLLKKLYNSGH 346
+ L ++ + NH + +NT+ SGK +LD +L K +GH
Sbjct: 819 ARGLSNMIMQLRKLCNHPFVFDEVENQMNPKNTSNDLLWRTSGKFELLDRILPKYQRTGH 878
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F QMT +DI++DFL LR Y RLDG+ ++++R ++ F+ +
Sbjct: 879 RVLMFFQMTAIMDIMEDFLRLRGIMYLRLDGTTKSDDRSDLLKEFNRPDS---------- 928
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V + L++
Sbjct: 929 -PYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLIS 987
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
++VEE I+ RA+ KL + V+
Sbjct: 988 SNSVEEKILERAKYKLDMDGKVI 1010
>gi|320169022|gb|EFW45921.1| chromodomain-helicase-DNA-binding protein 7 [Capsaspora owczarzaki
ATCC 30864]
Length = 2669
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 193/501 (38%), Positives = 269/501 (53%), Gaps = 73/501 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q EG++WL Y + +L DEMGLGKT+Q+I+FL LK + S GPFLV+ PLS
Sbjct: 907 LRSYQYEGVNWLRFCYSQCRSCILADEMGLGKTVQSITFLKSLKNATGS-GPFLVIAPLS 965
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKE-QSQMSNVSPLPFDVLLT 154
W E A++T L V+ Y G+ RR I M++ K + V L FD +LT
Sbjct: 966 TLPNWQREFAEWT-DLNVIVYHGKPLARRVISEFEMFDRDKAGMGKAKLVQHLSFDAILT 1024
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ L L +IPW IIDEA R+KN + L LR F + +L+TGTP+QN++
Sbjct: 1025 TYESTLQGVDDLGRIPWKCVIIDEAHRMKNAKARLSETLRA-FTINHSVLLTGTPLQNHV 1083
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELW+L++F P + + FL F D K ++Q +L+G+L MLRR K
Sbjct: 1084 EELWSLLNFLSPQDYSSKKMFLEQFGDL----------KTEQQVLALQGLLRPIMLRRLK 1133
Query: 275 ---QKLVECGHLMLPPLTEITVLQKKVYASIL------------RKELPKLLALS---SR 316
+K + + + E+T +QKK Y +IL + ++P L+ + +
Sbjct: 1134 GDVEKSIAPKEETIIEV-ELTPIQKKYYQAILGRNFEFLAKGCNKNDMPSLMNIVMELRK 1192
Query: 317 TANHQSLQN----------------------------TASGKLVVLDLLLKKLYNSGHRV 348
NH L ASGKLV++D LLK+L +GH+V
Sbjct: 1193 CCNHPYLIGGAEEKILGEIYGPNFYSTSPATLLLTLIQASGKLVLIDKLLKRLRENGHKV 1252
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDILQD+L +Y +ER+DG IR E R AAI FS G+D
Sbjct: 1253 LIFSQMVRCLDILQDYLTAMQYKFERIDGGIRGEARQAAIDRFS-----------KPGSD 1301
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
+FVF++ TRAGGVG+NL AADTVI Y+ DWNPQ D QA R HRIGQ V L+T +
Sbjct: 1302 SFVFLLCTRAGGVGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQTKSVKIYRLLTRN 1361
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
+ E + +A KL L V+
Sbjct: 1362 SYEREMFDKASMKLGLDQAVL 1382
>gi|1597721|emb|CAA67494.1| putative helicase [Schizosaccharomyces pombe]
Length = 1367
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 270/505 (53%), Gaps = 81/505 (16%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ Q+ G++W+ + N +L DEMGLGKT+Q + FLSYL S GPFL++ P
Sbjct: 388 GEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVP 447
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +A +TP L + Y G E R I +M N L F++LLT
Sbjct: 448 LSTVPAWQETLANWTPDLNSICYTGNTESRA-ILESM-----------NSRKLKFNILLT 495
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L+ I W Y IDEA RLKN S LY L + F RLL+TGTP+QNNL
Sbjct: 496 TYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQ-FRTANRLLITGTPLQNNL 554
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +L++F MP F ++ +A + I++ L+ L F+LRR K
Sbjct: 555 KELASLVNFLMPGKFYIRDEL------NFDQPNAEQERDIRD----LQERLQPFILRRLK 604
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS------------- 315
+ + + LP + E++ +Q + Y +IL K L +
Sbjct: 605 KDVEKS----LPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVE 660
Query: 316 --RTANHQSLQNTA----------------------SGKLVVLDLLLKKLYNSGHRVLLF 351
+ +NH L A SGK+V+LD LL++L + GHRVL+F
Sbjct: 661 LKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVLIF 720
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QM + L+IL +++ LR Y+Y+RLDG+I A R +I HF+ + + FV
Sbjct: 721 SQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPD-----------FV 769
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV +++ TVE
Sbjct: 770 FLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVE 829
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDR 496
E I+ RA RK+ L + ++ V ++
Sbjct: 830 EDILERARRKMILEYAIISLGVTEK 854
>gi|429861210|gb|ELA35910.1| rsc complex subunit [Colletotrichum gloeosporioides Nara gc5]
Length = 1430
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 278/535 (51%), Gaps = 79/535 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL +
Sbjct: 539 TEQANILVGGTLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLVTYLIERKKQ 598
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E K+ P + + Y G R+ Q +
Sbjct: 599 EGPYLVIVPLSTLTNWTLEFEKWAPSVSKIVYKGPPLARK-------------QQQDKIR 645
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L + +++++ RL++
Sbjct: 646 QGRFQVLLTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNQNSKLTSTIQQYYHTRFRLIL 705
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNL+ELWA+++F +P++F + F F ++ + + E+
Sbjct: 706 TGTPLQNNLTELWAMLNFTLPTIFKSAKTFDEWFNTPFANTGGQDKMDLTEEEQILVIRR 765
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR---------- 304
L +L F+LRR K+ + + LP TE + LQ K+Y ++
Sbjct: 766 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQSKLYKQMVTHNKILVSDGQ 821
Query: 305 ------KELPKLLALSSRTANH-------QSLQNT----------ASGKLVVLDLLLKKL 341
+ L ++ + NH ++L N +GK +LD +L K
Sbjct: 822 GGKTGARGLSNMIMQLRKLCNHPFVFDEVENLLNPMNVSNDLLWRTAGKFELLDRILPKY 881
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+GHRVL+F QMT +DI++D+L R Y RLDG+ +++ER +R F+
Sbjct: 882 KATGHRVLMFFQMTAIMDIMEDYLRYRNMKYMRLDGTTKSDERSDLLREFN--------- 932
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
A ++ F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 933 --APNSEYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 990
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+ L++ ++VEE I+ RA KL + V+ DR+ RT +ET D+
Sbjct: 991 LRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSTETDRDAMLRTLLETADM 1045
>gi|50310725|ref|XP_455384.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644520|emb|CAG98092.1| KLLA0F06710p [Kluyveromyces lactis]
Length = 1096
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/520 (35%), Positives = 277/520 (53%), Gaps = 75/520 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++GL+WL+ + + +L DEMGLGKTLQ I+FL YL++ + GPFLV+
Sbjct: 137 VNGQLRPYQIQGLNWLVALHKNQLAGILADEMGLGKTLQTIAFLGYLRYIEKKNGPFLVI 196
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP++ G++E+R + H K + FD+
Sbjct: 197 APKSTLNNWLREINRWTPEVSAFILQGDKEERSKLC-----HDK-------LLACDFDIC 244
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ +I W Y +IDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 245 VASYEIIIREKASFKKIDWEYVVIDEAHRIKNEESMLSQVLRE-FSSRNRLLITGTPLQN 303
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F K K L +LS F+LRR
Sbjct: 304 NLHELWALLNFLLPDIFADSATFDEWFSSESSEEDKEKVVK------QLHTVLSPFLLRR 357
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL-------------PKLLAL 313
K + G L+ P E+ V +QKK Y IL K++ +LL +
Sbjct: 358 IKNDVE--GSLL--PKKELNVYVGMSSMQKKWYKQILEKDIDAVNGSNGQKESKTRLLNI 413
Query: 314 S---SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQ 353
+ NH L + A G D L +YNS G RVL+F+Q
Sbjct: 414 VMQLRKCCNHPYLFDGAEPGPPYTTDEHL--VYNSAKLKVLDKLLKKFKEQGSRVLIFSQ 471
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M++ LDIL+D+ R+Y Y R+DGS E+R AI ++ A + F+F+
Sbjct: 472 MSRVLDILEDYCYFREYEYCRIDGSTAHEDRINAIDDYN-----------APDSKKFIFL 520
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
++TRAGG+G+NL AD V+ Y+ DWNPQ D QA+ RAHRIGQ V VT+++VEE
Sbjct: 521 LTTRAGGLGINLTTADIVVLYDSDWNPQADLQAMDRAHRIGQKKQVRVFRFVTDNSVEEK 580
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
I+ RA +KL+L V+ V + KE + L S+I
Sbjct: 581 ILERATQKLKLDQLVIQQGRVTNKKKENKNDSKEGLLSMI 620
>gi|302406510|ref|XP_003001091.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Verticillium albo-atrum VaMs.102]
gi|261360349|gb|EEY22777.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Verticillium albo-atrum VaMs.102]
Length = 1392
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 292/550 (53%), Gaps = 82/550 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS ++YL ++ GP+LV+
Sbjct: 497 VGGKLKEYQIKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIERKLQDGPYLVI 556
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G N R+ + +++ F VL
Sbjct: 557 VPLSTLTNWTLEFEKWAPSVTKIVYKGPP----NARKQQQDKIRQGR---------FQVL 603
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS+I W + IIDE R+KN +S L +++++ RL++TGTP+QN
Sbjct: 604 LTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNQNSKLTATIQQYYHTRFRLILTGTPLQN 663
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL+ELWA+++F +P++F ++ F F ++ + + E+ L +L
Sbjct: 664 NLTELWAMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMDLTEEEQILVIRRLHKVLRP 723
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR----------------K 305
F+LRR K+ + + LP TE + LQ K+Y ++ +
Sbjct: 724 FLLRRLKKDVEKD----LPDKTEKVIKCKFSALQTKLYKQMVTHNKIVVSDGQGGKTGAR 779
Query: 306 ELPKLLALSSRTANH-------QSLQNT----------ASGKLVVLDLLLKKLYNSGHRV 348
L ++ + NH +++ N +GK +LD +L K +GHRV
Sbjct: 780 GLSNMIMQLRKLCNHPFVFGEVENVMNPLNISDDKLWRTAGKFELLDRILPKYKATGHRV 839
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F QMT +DI++D+L R Y Y RLDG+ +++ER ++ F+ A +
Sbjct: 840 LMFFQMTAIMDIMEDYLRYRNYQYMRLDGTTKSDERSDLLKDFN-----------APDSP 888
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V + L++ +
Sbjct: 889 YFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLISSN 948
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDD---LRSIIFGLHLFDPKAIN 525
+VEE I+ RA KL + V+ D + + ETD LR+++ L D + +
Sbjct: 949 SVEEKILERARFKLDMDGKVIQAGRFDNK-----STETDRDAMLRTLLESADLAD--SGD 1001
Query: 526 NEESDDLRLS 535
EE DD L+
Sbjct: 1002 QEEMDDDELN 1011
>gi|346327194|gb|EGX96790.1| SNF2-family ATP dependent chromatin remodeling factor snf21
[Cordyceps militaris CM01]
Length = 1418
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 185/535 (34%), Positives = 278/535 (51%), Gaps = 79/535 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A V +LK +QV+GL W+I Y +N +L DEMGLGKT+Q IS ++YL +
Sbjct: 531 TEQANMLVGGKLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKQQ 590
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E K+ P + + Y G N R+ E +++
Sbjct: 591 TGPYLVIVPLSTLTNWNLEFEKWAPSINRIVYKGPP----NTRKQHQEKIRQGR------ 640
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L +++++ RL++
Sbjct: 641 ---FQVLLTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNSNSKLSATIQQYYNTRFRLIL 697
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNLSELWA+++F +P++F + F F ++ + ++ E+
Sbjct: 698 TGTPLQNNLSELWAMLNFVLPNIFKSATTFDEWFNTPFANTGGQDKIELTEEEQILVIRR 757
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASI------------ 302
L +L F+LRR K+ + + LP TE + LQ K+Y +
Sbjct: 758 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCQFSALQSKLYKQMVTHNKIAVSDGK 813
Query: 303 ---------------LRK--ELPKLLALSSRTANHQSLQNT----ASGKLVVLDLLLKKL 341
LRK P + N S+ N +GK +LD +L K
Sbjct: 814 GGKAGARGLSNMIMQLRKLCNHPFVFGEVENVMNPMSISNDILWRTAGKFELLDRVLPKY 873
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+GHRVL+F QMT +DI++D+L R+ Y RLDG+ +++ER + F+
Sbjct: 874 QATGHRVLMFFQMTAIMDIMEDYLRYRRMEYLRLDGTTKSDERSDLLHEFN--------- 924
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
A + F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 925 --APDSKYFIFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 982
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+ L++ ++VEE I+ RA KL + V+ DR+ RT +ET ++
Sbjct: 983 LRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLETAEM 1037
>gi|443893757|dbj|GAC71213.1| V-SNARE [Pseudozyma antarctica T-34]
Length = 1242
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 185/490 (37%), Positives = 265/490 (54%), Gaps = 76/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK Q+ GL+WL + N +L DEMGLGKT+Q ++FLSYL S GPFLV+ PLS
Sbjct: 534 LKDFQMTGLNWLAYLWSKNENGILADEMGLGKTVQTVAFLSYLFHSCYQYGPFLVVVPLS 593
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W+++ + P L + Y+G R IR + K+ + F+VL+TTY
Sbjct: 594 TLPAWMNQFEHWAPDLNAIAYIGNSASRDMIRDYEFGPPKK---------MRFNVLVTTY 644
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ +L D+ L QI W Y +DEA RLKN + LY L F +LL+TGTP+QNN+ E
Sbjct: 645 EFILKDRAELGQIKWQYLAVDEAHRLKNSEAQLYEALNS-FHAAGKLLITGTPLQNNVKE 703
Query: 217 LWALMHFCMPSVFGTLNQF-LSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
L AL+HF P F F ++ AV IKE L + MLRR K+
Sbjct: 704 LIALLHFLRPDQFDLDVDFDINNVDQAV----------IKELHEKLDNV----MLRRLKK 749
Query: 276 KLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS-------------R 316
+V+ LP +E ++ +Q+++Y +IL + L S+ +
Sbjct: 750 DVVK----ELPTKSEKILRVEMSAMQQRMYKAILTRNYSLLSGASTAQFSLLNIAIELKK 805
Query: 317 TANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+NH L + SGK+V+LD LL +L GHRVL+F+QM + LD
Sbjct: 806 ASNHPYLFDGTEAISDNREETLKGLVMHSGKMVLLDKLLARLKADGHRVLIFSQMVRMLD 865
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL D++ LR Y ++RLDG+I +E R AI HF+ + G+ F F++STRAG
Sbjct: 866 ILSDYMSLRGYIHQRLDGTISSEVRKKAIEHFNAE-----------GSPDFAFLLSTRAG 914
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL ADTVI ++ DWNPQ D QA+ RAHR+ HV L+T+ TVEE ++ RA+
Sbjct: 915 GLGINLETADTVIIFDSDWNPQNDLQAMARAHRLNSKFHVSVFRLLTKDTVEEDVLERAK 974
Query: 480 RKLRLSHNVV 489
RK+ L + ++
Sbjct: 975 RKMVLEYAII 984
>gi|126649341|ref|XP_001388342.1| SNF2 helicase [Cryptosporidium parvum Iowa II]
gi|32398963|emb|CAD98428.1| SNF2 helicase, possible [Cryptosporidium parvum]
gi|126117436|gb|EAZ51536.1| SNF2 helicase, putative [Cryptosporidium parvum Iowa II]
Length = 1102
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 282/489 (57%), Gaps = 64/489 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LKP+Q+EGL+WLI Y G+N +L DEMGLGKT Q+IS L+YL+ + G LVL P S
Sbjct: 185 LKPYQLEGLNWLINLYEGGLNGILADEMGLGKTFQSISLLAYLREYRDIKGLHLVLSPKS 244
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E+A+F P ++ ++++G ++R ++ +++ +Q + N + DV++T+Y
Sbjct: 245 TLGNWMNEIARFCPSIKAVKFLGNGQERSDLIDNELKNI-DQRDLENGT---CDVIVTSY 300
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR-RLLMTGTPIQNNLS 215
+++L ++ + + + IIDEA R+KN +S L +R+ L R RLL+TGTP+QN+L
Sbjct: 301 EMLLKERTWFLRRNFHSVIIDEAHRIKNANSKLSQTVRQ--LNTRFRLLLTGTPLQNSLR 358
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELW+L++F P +F + +F + F+ + + + I +F IL FMLRR K
Sbjct: 359 ELWSLLNFLYPEIFSSSEEFEALFE----AQTGEEEQSIIARFHR---ILRPFMLRRVKS 411
Query: 276 KLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKL-------------LALSSR 316
++ + +PP EI T +Q+++Y +L K + L LA+ R
Sbjct: 412 EV----EIDIPPKKEILLYVPLTNMQRRLYKDLLSKNVDALQEKEGGGKLRLINLAMQLR 467
Query: 317 TA-NHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
A NH L + SGK+V++D L+KKL + G R+L+F+QM + LDI
Sbjct: 468 KACNHPYLFDGYEDKSVDPFGEHVVENSGKMVLMDRLIKKLVSGGSRILIFSQMARVLDI 527
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L+D+ +R + Y R+DG+ ++R I F+ ++ + VF++STRAGG
Sbjct: 528 LEDYCHMRGFPYCRIDGNTSGDDRDRQISEFNKPNS-----------EKLVFLLSTRAGG 576
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL AD VI Y+ DWNPQ D QA+ RAHRIGQ V L EHT+EE I+ RA
Sbjct: 577 LGINLATADIVILYDSDWNPQADLQAMDRAHRIGQKKPVFVFRLCHEHTIEEKIIERANL 636
Query: 481 KLRLSHNVV 489
KL+L ++
Sbjct: 637 KLQLDFAII 645
>gi|67609493|ref|XP_667013.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54658094|gb|EAL36778.1| hypothetical protein Chro.60441, partial [Cryptosporidium hominis]
Length = 1102
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 282/489 (57%), Gaps = 64/489 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LKP+Q+EGL+WLI Y G+N +L DEMGLGKT Q+IS L+YL+ + G LVL P S
Sbjct: 185 LKPYQLEGLNWLINLYEGGLNGILADEMGLGKTFQSISLLAYLREYRDIKGLHLVLSPKS 244
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E+A+F P ++ ++++G ++R ++ +++ +Q + N + DV++T+Y
Sbjct: 245 TLGNWMNEIARFCPSIKAVKFLGNGQERSDLIDNELKNI-DQRDLENGT---CDVIVTSY 300
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR-RLLMTGTPIQNNLS 215
+++L ++ + + + IIDEA R+KN +S L +R+ L R RLL+TGTP+QN+L
Sbjct: 301 EMLLKERTWFLRRNFHSVIIDEAHRIKNANSKLSQTVRQ--LNTRFRLLLTGTPLQNSLR 358
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELW+L++F P +F + +F + F+ + + + I +F IL FMLRR K
Sbjct: 359 ELWSLLNFLYPEIFSSSEEFEALFE----AQTGEEEQSIIARFHR---ILRPFMLRRVKS 411
Query: 276 KLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKL-------------LALSSR 316
++ + +PP EI T +Q+++Y +L K + L LA+ R
Sbjct: 412 EV----EIDIPPKKEILLYVPLTNMQRRLYKDLLSKNVDALQEKEGGGKLRLINLAMQLR 467
Query: 317 TA-NHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
A NH L + SGK+V++D L+KKL + G R+L+F+QM + LDI
Sbjct: 468 KACNHPYLFDGYEDKSVDPFGEHVVENSGKMVLMDRLIKKLVSGGSRILIFSQMARVLDI 527
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L+D+ +R + Y R+DG+ ++R I F+ ++ + VF++STRAGG
Sbjct: 528 LEDYCHMRGFPYCRIDGNTSGDDRDRQISEFNKPNS-----------EKLVFLLSTRAGG 576
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL AD VI Y+ DWNPQ D QA+ RAHRIGQ V L EHT+EE I+ RA
Sbjct: 577 LGINLATADIVILYDSDWNPQADLQAMDRAHRIGQKKPVFVFRLCHEHTIEEKIIERANL 636
Query: 481 KLRLSHNVV 489
KL+L ++
Sbjct: 637 KLQLDFAII 645
>gi|310791654|gb|EFQ27181.1| SNF2 family domain-containing protein [Glomerella graminicola M1.001]
Length = 1458
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 283/539 (52%), Gaps = 87/539 (16%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A+ V +LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL +
Sbjct: 555 TEQADILVGGKLKEYQIKGLQWMISLYNNNLNGILADEMGLGKTIQTISLVTYLIERKKQ 614
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVG----EREQRRNIRRTMYEHVKEQSQM 141
GP+LV+ PLS W E K+ P + + Y G ++Q+ IR+
Sbjct: 615 EGPYLVIVPLSTLTNWTLEFEKWAPSVSKIVYKGPPLVRKQQQDQIRQGR---------- 664
Query: 142 SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L + +++++
Sbjct: 665 -------FQVLLTTYEYIIKDRPVLSKIKWFHMIIDEGHRMKNQNSKLTSTIQQYYHTRF 717
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ---- 257
RL++TGTP+QNNL+ELWA+++F +P++F + F F ++ + + E+
Sbjct: 718 RLILTGTPLQNNLTELWAMLNFTLPTIFKSAKTFDEWFNTPFANTGGQDKMDLTEEEQIL 777
Query: 258 -FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR------ 304
L +L F+LRR K+ + + LP TE + LQ K+Y ++
Sbjct: 778 VIRRLHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQSKLYKQMVTHNKIVV 833
Query: 305 ----------KELPKLLALSSRTANHQ----SLQNT-------------ASGKLVVLDLL 337
+ L ++ + NH ++NT +GK +LD +
Sbjct: 834 SDGQGGKAGARGLSNMIMQLRKLCNHPFVFGEVENTMNPLNISNDMLWRTAGKFELLDRV 893
Query: 338 LKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAI 397
L K +GHRVL+F QMT +DI++D+L R Y RLDG+ +++ER +R F+
Sbjct: 894 LPKYKATGHRVLMFFQMTAIMDIMEDYLRYRNLKYLRLDGTTKSDERSDLLREFN----- 948
Query: 398 ERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMN 457
A ++ F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N
Sbjct: 949 ------APDSEYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKN 1002
Query: 458 HVLSINLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
V + L++ ++VEE I+ RA KL + V+ DR+ RT +E+ DL
Sbjct: 1003 EVRILRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSTETDRDAMLRTLLESADL 1061
>gi|441617357|ref|XP_004088435.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Nomascus leucogenys]
Length = 743
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 183/462 (39%), Positives = 261/462 (56%), Gaps = 68/462 (14%)
Query: 64 MGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQ 123
MGLGKT+Q ISFLSYL GPFL++ PLS W E + P++ V+ Y+G+
Sbjct: 1 MGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMS 60
Query: 124 RRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLK 183
R IR YE + Q++ L F+ L+TTY+++L D+ L I W + +DEA RLK
Sbjct: 61 RNTIRE--YEWIHSQTKR-----LKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLK 113
Query: 184 NPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAV 243
N S+LY L + F RLL+TGTP+QN+L ELW+L+HF MP F +F F++
Sbjct: 114 NDDSLLYKTLID-FKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF----EFWEDFEE-- 166
Query: 244 HSSSAPKRGKIKEQ-FTSLKGILSAFMLRRTKQKLVECGHLMLPPL--TEITVLQKKVYA 300
GK +E + SL +L F+LRR K+ + + + + E++ LQK+ Y
Sbjct: 167 ------DHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYK 220
Query: 301 SILRKELPKLLALSSR---------------TANHQSL-----QNT-------------A 327
IL + K LA +R NH L +N +
Sbjct: 221 WILTRNY-KALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRS 279
Query: 328 SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAA 387
SGKL++LD LL +L G+RVL+F+QM + LDIL ++L ++ Y ++RLDGSI+ E R A
Sbjct: 280 SGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQA 339
Query: 388 IRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQAL 447
+ HF+ A G++ F F++STRAGG+G+NL +ADTV+ ++ DWNPQ D QA
Sbjct: 340 LDHFN-----------ADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 388
Query: 448 QRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
RAHRIGQ V LVT+ TVEE I+ RA++K+ L H V+
Sbjct: 389 ARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVI 430
>gi|195379440|ref|XP_002048487.1| GJ13998 [Drosophila virilis]
gi|194155645|gb|EDW70829.1| GJ13998 [Drosophila virilis]
Length = 2012
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 262/499 (52%), Gaps = 71/499 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L P+Q+EG++WL + ++ +L DEMGLGKT+Q ++FL L GPFLV PL
Sbjct: 727 QLHPYQIEGINWLRYSWGQSIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPL 786
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR---TMYEHVKEQSQMSNV--SPLPFD 150
S W E + P + Y+G+++ R IR T E +++S + + F+
Sbjct: 787 STLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELTFDEGAIRGTKVSRLRTTQYKFN 846
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+TGTP+
Sbjct: 847 VLLTSYELISMDAPCLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YAIAYKLLLTGTPL 905
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL+ L++F F L F F D +EQ L +L ML
Sbjct: 906 QNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLGPHML 955
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS--------- 315
RR K +++ +P +E V +QKK Y IL K L + S
Sbjct: 956 RRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCSLINI 1011
Query: 316 -----RTANHQSL--------------------QNTASGKLVVLDLLLKKLYNSGHRVLL 350
+ NH L A+GKLV+L +LK+L + HRVL+
Sbjct: 1012 MMDLKKCCNHPYLFPSAAEEAPTSAGGIYEINSLTKAAGKLVLLSKMLKQLKSQNHRVLI 1071
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LDIL+DFLE +Y YER+DGSI R AI F+ A G F
Sbjct: 1072 FSQMTKMLDILEDFLEGEQYKYERIDGSITGTVRQEAIDRFN-----------APGAQQF 1120
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT ++V
Sbjct: 1121 VFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSV 1180
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE + + A+RK+ L+H VV
Sbjct: 1181 EERVTQVAKRKMMLTHLVV 1199
>gi|400602611|gb|EJP70213.1| chromatin remodeling complex SWI/SNF, component SWI2 and ATPase
[Beauveria bassiana ARSEF 2860]
Length = 1404
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 185/535 (34%), Positives = 279/535 (52%), Gaps = 79/535 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A + +LK +QV+GL W+I Y +N +L DEMGLGKT+Q IS ++YL +
Sbjct: 522 TEQANMLIGGKLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKQQ 581
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E K+ P + + Y G N R+ E +++
Sbjct: 582 SGPYLVIVPLSTLTNWNLEFEKWAPGISRIVYKGPP----NARKQQQEKIRQGR------ 631
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L +++++ RL++
Sbjct: 632 ---FQVLLTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNSNSKLSATIQQYYNTRFRLIL 688
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNLSELWA+++F +P++F + F F ++ + ++ E+
Sbjct: 689 TGTPLQNNLSELWAMLNFVLPNIFKSATTFDEWFNTPFANTGGQDKIELTEEEQILVIRR 748
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASI------------ 302
L +L F+LRR K+ + + LP TE + LQ K+Y +
Sbjct: 749 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQSKLYKQMVTHNKIAVGDGK 804
Query: 303 ---------------LRK--ELPKLLALSSRTANHQSLQNT----ASGKLVVLDLLLKKL 341
LRK P + + N S+ N +GK +LD +L K
Sbjct: 805 GGKTGARGLSNMIMQLRKLCNHPFVFSEVENVMNPLSISNDILWRTAGKFELLDRILPKY 864
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+GHRVL+F QMT +DI++D+L R+ Y RLDG+ +++ER + F+
Sbjct: 865 QATGHRVLMFFQMTAIMDIMEDYLRYRRMEYLRLDGTTKSDERSDLLHDFN--------- 915
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
+ + FVF++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 916 --SPDSKYFVFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 973
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+ L++ ++VEE I+ RA KL + V+ DR+ RT +ET D+
Sbjct: 974 LRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLETADM 1028
>gi|30687235|ref|NP_197432.2| Homeotic gene regulator [Arabidopsis thaliana]
gi|332005300|gb|AED92683.1| Homeotic gene regulator [Arabidopsis thaliana]
Length = 1064
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 172/489 (35%), Positives = 265/489 (54%), Gaps = 62/489 (12%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ +Q+EGL W++ Y N +L DEMGLGKT+Q I+ ++YL S+ GP L+L P
Sbjct: 384 GELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGPHLILAP 443
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
+V W +E A + P + Y G +E+R IR + ++ F+VL+T
Sbjct: 444 KAVLPNWENEFALWAPSISAFLYDGSKEKRTEIR-------------ARIAGGKFNVLIT 490
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
YD+++ D+ FL +I W Y I+DE RLKN L L + + RRLL+TGTPIQN+L
Sbjct: 491 HYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSL 550
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF--TSLKGILSAFMLRR 272
ELW+L++F +P +F +++ F F + +E L ++ F+LRR
Sbjct: 551 QELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDEEELLIINRLHHVIRPFLLRR 610
Query: 273 TKQKLVECGHLMLPPLTEITV-LQKKVYASILRKELPKL--LALSSRTANHQSLQN---- 325
K ++ + LP T++ + + + K++ + + L S +SLQN
Sbjct: 611 KKSEVEK----FLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQNLTMQ 666
Query: 326 -------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
ASGK +LD LL KL +GHR+LLF+QMT+ +D+
Sbjct: 667 LRKCCNHPYLFVGADYNMCKKPEIVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDL 726
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L+ +L L Y Y RLDGS + ++R ++ F+ + F+F++STRAGG
Sbjct: 727 LEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDS-----------PYFMFLLSTRAGG 775
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+GLNL ADT+I ++ DWNPQ+D+QA RAHRIGQ V LV+ ++EEVI+ RA++
Sbjct: 776 LGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQ 835
Query: 481 KLRLSHNVV 489
K+ + V+
Sbjct: 836 KMGIDAKVI 844
>gi|413948163|gb|AFW80812.1| putative chromatin-remodeling factor family [Zea mays]
Length = 1113
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 198/553 (35%), Positives = 295/553 (53%), Gaps = 81/553 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 222 IKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 281
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+ E+ +F P L ++++G E+R +IR + + P FDV
Sbjct: 282 APKSTLGNWMKEIQRFCPILRAVKFLGNPEERNHIRDDL------------LQPGKFDVC 329
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 330 VTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMR-IYNTNYRLLITGTPLQN 388
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 389 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 441
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 442 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKRLLNIAMQL 497
Query: 317 --TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L A +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 498 RKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 557
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 558 ILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFN-----------KPGSEKFVFLLSTRAG 606
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE-------HTVEE 472
G+G+NL AD V+ Y+ DWNPQ D QA RAHRIGQ V TE +T+EE
Sbjct: 607 GLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEIMQTKLQYTIEE 666
Query: 473 VIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHL-FDPK--AINNEES 529
++ RA +KL L V+ R +++T + D L+ + FG + F K I +E+
Sbjct: 667 KVIERAYKKLALDALVIQQ---GRLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDI 723
Query: 530 DDLRLSGLNSMVE 542
D + G + E
Sbjct: 724 DRIIAKGEETTAE 736
>gi|222637088|gb|EEE67220.1| hypothetical protein OsJ_24338 [Oryza sativa Japonica Group]
Length = 2258
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 191/507 (37%), Positives = 271/507 (53%), Gaps = 73/507 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L PHQ+E L+WL + + NV+L DEMGLGKT+ A +FLS L P LVL PLS
Sbjct: 673 LFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLS 732
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSPL-PFDVLLT 154
W++E A + P L V+ Y G R IR+ YE H + SQM + F+VLLT
Sbjct: 733 TMPNWMAEFASWAPHLNVVEYHGSARARSIIRQ--YEWHEGDASQMGKIKKSHKFNVLLT 790
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++VL+D +L + W I+DE RLKN SS L+++L R+L+TGTP+QNN+
Sbjct: 791 TYEMVLVDAAYLRSVSWEVLIVDEGHRLKNSSSKLFSLLNT-LSFQHRVLLTGTPLQNNI 849
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
E++ L++F P+ F +L F F D E+ LK +++ MLRR K
Sbjct: 850 GEMYNLLNFLQPASFPSLASFEEKFNDLT----------TTEKVEELKNLVAPHMLRRLK 899
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQSLQN--- 325
+ ++ +PP TE +T +Q + Y ++L K ++L + HQSL N
Sbjct: 900 KDAMQ----NIPPKTERMVPVELTSIQAEYYRAMLTKNY-QVLRNIGKGGAHQSLLNIVM 954
Query: 326 ------------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
AS KL +L +LK L+ GHRVL+F+QMT
Sbjct: 955 QLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFSQMT 1014
Query: 356 QTLDILQDFL--ELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
+ LDIL+D+L E ++ER+DGS+ ER AAI F+ + FVF+
Sbjct: 1015 KLLDILEDYLTWEFGPKTFERVDGSVSVAERQAAIARFNQDKS------------RFVFL 1062
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STR+ G+G+NL ADTVI Y+ D+NP D QA+ RAHRIGQ N +L LV +VEE
Sbjct: 1063 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEER 1122
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKE 500
I+ A++KL L V +EV++
Sbjct: 1123 ILHLAKKKLMLDQLFVNKSESQKEVED 1149
>gi|218199663|gb|EEC82090.1| hypothetical protein OsI_26092 [Oryza sativa Indica Group]
Length = 2275
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 191/507 (37%), Positives = 271/507 (53%), Gaps = 73/507 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L PHQ+E L+WL + + NV+L DEMGLGKT+ A +FLS L P LVL PLS
Sbjct: 690 LFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLS 749
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVS-PLPFDVLLT 154
W++E A + P L V+ Y G R IR+ YE H + SQM + F+VLLT
Sbjct: 750 TMPNWMAEFASWAPHLNVVEYHGSARARSIIRQ--YEWHEGDASQMGKIKKSHKFNVLLT 807
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++VL+D +L + W I+DE RLKN SS L+++L R+L+TGTP+QNN+
Sbjct: 808 TYEMVLVDAAYLRSVSWEVLIVDEGHRLKNSSSKLFSLLNT-LSFQHRVLLTGTPLQNNI 866
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
E++ L++F P+ F +L F F D E+ LK +++ MLRR K
Sbjct: 867 GEMYNLLNFLQPASFPSLASFEEKFNDLT----------TTEKVEELKNLVAPHMLRRLK 916
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQSLQN--- 325
+ ++ +PP TE +T +Q + Y ++L K ++L + HQSL N
Sbjct: 917 KDAMQ----NIPPKTERMVPVELTSIQAEYYRAMLTKNY-QVLRNIGKGGAHQSLLNIVM 971
Query: 326 ------------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
AS KL +L +LK L+ GHRVL+F+QMT
Sbjct: 972 QLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLTLLHSMLKILHKDGHRVLIFSQMT 1031
Query: 356 QTLDILQDFL--ELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
+ LDIL+D+L E ++ER+DGS+ ER AAI F+ + FVF+
Sbjct: 1032 KLLDILEDYLTWEFGPKTFERVDGSVSVAERQAAIARFNQDKS------------RFVFL 1079
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STR+ G+G+NL ADTVI Y+ D+NP D QA+ RAHRIGQ N +L LV +VEE
Sbjct: 1080 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEER 1139
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKE 500
I+ A++KL L V +EV++
Sbjct: 1140 ILHLAKKKLMLDQLFVNKSESQKEVED 1166
>gi|255940126|ref|XP_002560832.1| Pc16g04810 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585455|emb|CAP93151.1| Pc16g04810 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1488
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 207/587 (35%), Positives = 297/587 (50%), Gaps = 97/587 (16%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F ELK QV+GL++L ++ G NV+L DEMGLGKT+Q +SF+++++ + GPF+
Sbjct: 426 FLQNGELKDFQVKGLNFLAFNWVRGRNVVLADEMGLGKTVQTVSFINWMRHVRRQQGPFI 485
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W +TP L + Y G + R +R YE + + N F
Sbjct: 486 VIVPLSTMPAWADTFDHWTPDLNYVVYNGSEKARSVLRD--YELMVD----GNPKRPKFH 539
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLTTY+ + D FL Q W + +DEA RLKN S LY L E + RLL+TGTPI
Sbjct: 540 VLLTTYEYAMNDSPFLGQFKWQFMAVDEAHRLKNRDSQLYIKLFE-WKCQARLLITGTPI 598
Query: 211 QNNLSELWALMHFCMPSVFGT-----LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGIL 265
QNNL+EL ALM F P + LN +++ ++ L +
Sbjct: 599 QNNLAELSALMDFLNPGLVEVDVDMDLNSEVAS-----------------QKLAELTTAI 641
Query: 266 SAFMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKEL------------ 307
+MLRRTK K VE LPP T E++ +Q + Y +IL K
Sbjct: 642 QPYMLRRTKSK-VESD---LPPKTEKIIRVELSDVQLEYYKNILTKNYAALNDGNKGMKQ 697
Query: 308 -----------------------PKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNS 344
K+L S+R + T+SGK+++LD LL+KL
Sbjct: 698 SLLNIMMELKKASNHPFMFPNAEAKILEGSARREDILRAMITSSGKMMLLDQLLRKLSVD 757
Query: 345 GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEA 404
GHRVL+F QM L+IL +++E R Y Y+RLDG+I + R AI H++ A
Sbjct: 758 GHRVLIFCQMVGMLNILSEYMEYRGYKYQRLDGTIPSAARRLAIEHYN-----------A 806
Query: 405 GGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINL 464
G+ F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ V L
Sbjct: 807 PGSTDFAFLLSTRAGGLGINLMTADTVVLFDSDWNPQADLQAMARAHRIGQTRPVSVYRL 866
Query: 465 VTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKE------RTAVE---TDDLRSII-- 513
V++ T+EE ++ RA KL L + V D+E E R E TDD+ I+
Sbjct: 867 VSKDTIEEEVIERARNKLLLEFITIQRGVTDKEASEMQNKMARVVAEPNSTDDISRILKR 926
Query: 514 FGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKF 560
G +F+ + N ++ + L + + + E EQ+ G +F
Sbjct: 927 RGQKMFE-QTDNQKKLEQLDIDSVLANAELHQTEEAEQIQADGGEEF 972
>gi|354544114|emb|CCE40836.1| hypothetical protein CPAR2_108750 [Candida parapsilosis]
Length = 1403
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 193/531 (36%), Positives = 279/531 (52%), Gaps = 80/531 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q ++FLS+L +++ GP L
Sbjct: 348 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHL 407
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W K++P + + Y+G E RR IR YE N P F+
Sbjct: 408 VVVPLSTIPAWQETFEKWSPDINCIYYLGNGEARRTIRD--YEWY-----TPNGKP-KFN 459
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLTTY+ +L D+ L + W + +DEA RLKN S LY L+ F RLL+TGTP+
Sbjct: 460 VLLTTYEYILKDRAELGSLKWQFLAVDEAHRLKNADSSLYESLKS-FRCANRLLITGTPL 518
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL AL +F MP F + + + IK+ L+ + ++L
Sbjct: 519 QNNLKELAALCNFLMPGKFDIEQEI------DFETPDEEQEMYIKD----LQKKIKPYIL 568
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS---------- 314
RR K K VE LP T E++ +Q Y +I+ K L A +
Sbjct: 569 RRLK-KDVETS---LPSKTERILRVELSDIQTDYYKNIITKNYAALNAGNKGSQISLLNV 624
Query: 315 ----SRTANHQSLQNTA-----------------------SGKLVVLDLLLKKLYNSGHR 347
+ +NH L + A SGK+V+L+ LL +L GHR
Sbjct: 625 MSELKKASNHPYLFDGAEERVLARAGSHTRENILKGMIMSSGKMVLLEQLLSRLKKEGHR 684
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++ ++ Y ++RLDG I + +R +I HF+ A +
Sbjct: 685 VLVFSQMVRMLDILGDYMSIKGYQFQRLDGGIPSAQRRISIDHFN-----------APDS 733
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV V++
Sbjct: 734 KDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVSK 793
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVE--TDDLRSII-FG 515
TVEE I+ RA +K+ L + ++ + D K+ + E T +L I+ FG
Sbjct: 794 DTVEEQILERARKKMILEYAIISLGITDPNAKKSSKTEPSTSELSQILKFG 844
>gi|301117680|ref|XP_002906568.1| chromodomain-helicase-DNA-binding protein 1 [Phytophthora infestans
T30-4]
gi|262107917|gb|EEY65969.1| chromodomain-helicase-DNA-binding protein 1 [Phytophthora infestans
T30-4]
Length = 875
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 229/732 (31%), Positives = 355/732 (48%), Gaps = 120/732 (16%)
Query: 12 KIIHDNDERDGQTPVDAAEFGVT-------AELKPHQVEGLSWLIRRYLLGVNVLLGDEM 64
K++H ++R GQ P A+ T L +Q+ GL WL+R++ G+N +LGDEM
Sbjct: 3 KVVHTLEQR-GQQPTPLADQVTTQPSLLKNVALHDYQLTGLQWLLRKHEQGLNPILGDEM 61
Query: 65 GLGKTLQAISFLSYLKFSQ-----MSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVG 119
GLGKTLQ ISF+ L S G +L+ PLSV W+ + +F P + + Y+G
Sbjct: 62 GLGKTLQIISFIVALVVSDREHNMAEGGRYLIAAPLSVLPNWMEQFEQFAPSISTVMYIG 121
Query: 120 EREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEA 179
+ R I++ + E S ++ PL V++T+Y+++L D F + W TI+DE
Sbjct: 122 PAKDREAIQKAI-----EASPLAQ--PL---VVVTSYEMLLFDHDFFHKTQWEATIMDEG 171
Query: 180 QRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTF 239
RLKNP L+ ++ ++TGTPIQN+L EL+AL+ PS+F F +TF
Sbjct: 172 HRLKNPKGQLHGIVSTRLRSKYMAILTGTPIQNDLQELFALLSILNPSIFNDQKLFEATF 231
Query: 240 KDAVHSSSA----PKRGKIKEQFTSLKGILSAFMLRRTKQKLVEC-GHLMLPPLTEITV- 293
+D + + ++ K K + + + + + + G LPPL+E+ V
Sbjct: 232 RDYFSAKAQRLEEDRQAKSKRASRAEELMRRLLAPLLLLRTVQDVQGAFTLPPLSEMVVH 291
Query: 294 -----LQKKVYASILRKE----------------LPKLLALSSRTANHQSLQNTA----- 327
+Q+ Y ++ K L +L + NH L A
Sbjct: 292 TPMSAMQRAYYKEVIAKNAEVLNRAARAQGNRVPLLNILPQLRKACNHPYLFPGAEPEPF 351
Query: 328 ---------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGS 378
SGKL VL +L +L GHRVLLF+Q LDI+QDFL L ++YER+DGS
Sbjct: 352 VEGSHLYENSGKLFVLHQILPRLKQKGHRVLLFSQSPPFLDIIQDFLTLESFAYERIDGS 411
Query: 379 IRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDW 438
+R +ER+ I F + FVF+ISTRAGG+GLNL +ADTVIF + D+
Sbjct: 412 VRGKERWQCIERFKKDP------------ETFVFLISTRAGGLGLNLQSADTVIFADSDY 459
Query: 439 NPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREV 498
NPQ D QA+ RA+R+GQ + I + +TVEE I RR+ +K+R++ + R +
Sbjct: 460 NPQTDLQAIARAYRLGQTKPIHVIKFLCANTVEESIYRRSLKKMRMADRI-------RNL 512
Query: 499 KERTAVETDD---------LRSIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRH 549
RT VE ++ L I FGLH +A +E+ D L ++ ++A +
Sbjct: 513 ARRTNVEDEETEDDSDKSLLDLIQFGLHRLMQEAA-DEDEDALMKPLEEEYIQHILARKS 571
Query: 550 EQVSGKAGRKFE-----VNPVALLEESDLLMHES--FASATSYPDL--DEASYRSWVEKF 600
Q + +A + V LLE E+ + Y + ++A +EK
Sbjct: 572 LQPADRATDSDDETVSTVKSDKLLESGGDFREENMYYFEGEDYTKIVTNKAQDAELLEKL 631
Query: 601 KEASESSSNTIAESGRRR------------------SPEDKQRKLEAARRKAEEKKLAKW 642
+ + +SS ++ R+R + ++ RKLE R+KA E+KLA+W
Sbjct: 632 CKETTNSSKRQTKTARKRYDQDDDEEEDEGEENVVENEVERARKLEERRQKALERKLAQW 691
Query: 643 EANGYQSLSVKT 654
+AN L K+
Sbjct: 692 KANNPGRLYYKS 703
>gi|365985357|ref|XP_003669511.1| hypothetical protein NDAI_0C06090 [Naumovozyma dairenensis CBS 421]
gi|343768279|emb|CCD24268.1| hypothetical protein NDAI_0C06090 [Naumovozyma dairenensis CBS 421]
Length = 1483
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 182/506 (35%), Positives = 273/506 (53%), Gaps = 74/506 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++F+S+L +++ GP LV+ P
Sbjct: 394 GELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQTVAFISWLIYARKQNGPHLVVVP 453
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W K+ P+L + Y+G + R IR + + NV F+VL+T
Sbjct: 454 LSTMPAWQETFEKWAPELNCICYMGNQRSRDTIREFEFYTNPQAKGKKNVK---FNVLMT 510
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D L I W + +DEA RLKN S LY L F + RLL+TGTP+QNN+
Sbjct: 511 TYEYILKDCSELGSIKWQFLAVDEAHRLKNAESSLYESLNS-FKVNNRLLITGTPLQNNI 569
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL++F MP F T++Q + F++ +E L L AF+LRR K
Sbjct: 570 KELAALVNFLMPGRF-TIDQEID-FENQDEQQ--------EEYIRHLHSRLQAFILRRLK 619
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP T E++ +Q Y +IL K L A +
Sbjct: 620 KDVEKS----LPSKTERILRVELSDVQTGYYKNILTKNYAALTAGAKGGHFSLLNIMSEL 675
Query: 315 SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L + A SGK+V+LD LL +L GHRVL
Sbjct: 676 KKASNHPYLFDNAEERVLEKFGDGKKTRENILRGLIMSSGKMVLLDQLLTRLKKDGHRVL 735
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + +
Sbjct: 736 IFSQMVRMLDILGDYLSIKGITFQRLDGTVPSAQRRISIDHFNAPDSKDD---------- 785
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
VF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++ T
Sbjct: 786 -VFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDT 844
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD 495
VEE ++ RA +K+ L + ++ V D
Sbjct: 845 VEEEVLERARKKMILEYAIISLGVTD 870
>gi|301105731|ref|XP_002901949.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099287|gb|EEY57339.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 744
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 187/511 (36%), Positives = 277/511 (54%), Gaps = 72/511 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EG+ WL + G+N +L DEMGLGKT+Q I L++LK + GP L++ PLS
Sbjct: 153 LRDYQLEGIRWLCNLFENGLNGILADEMGLGKTIQVIGLLAHLKALGVR-GPHLIVAPLS 211
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W +E K+ P + V+ Y G +++R+ +R+ K+ S + F V++++Y
Sbjct: 212 TLMNWANEFRKWAPSMPVVIYHGTKQERKEMRKNALNRKKK-------SDVNFPVVISSY 264
Query: 157 DVVLMDQG--FLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+V++ D F S W Y +IDE RLKN L L+ RLL+TGTP+QNNL
Sbjct: 265 EVMISDARAFFSSGFVWKYMVIDEGHRLKNMDCKLVRELKRG-RSENRLLLTGTPLQNNL 323
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFK---DAVHSSSAPK---------RGKIK-EQFTSL 261
+ELW+L++F +P VF L F S F DAV +++A +G+ K E L
Sbjct: 324 TELWSLLNFILPDVFDDLELFESWFSFTPDAVATAAATGESVAAQDVLQGEKKVEVIGKL 383
Query: 262 KGILSAFMLRRTKQKLVE--CGHLMLPPLTEITVLQKKVYASILRKELPKLLA------L 313
IL F+LRR K +VE + +T +Q++ Y I L K +
Sbjct: 384 HEILRPFLLRRLKVDVVEEMVSKTEIFVYCSMTPMQREYYQMIRDGTLAKAMEEKYGKFQ 443
Query: 314 SSRTANHQSLQNT--------------------------------ASGKLVVLDLLLKKL 341
+ + N +L+N SGKL +LD +L++L
Sbjct: 444 AQKAFNTTTLRNKMMQLRKCCLHPYLFDEPLTAGGDVVTDERMIETSGKLSILDRMLRQL 503
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
GH+VL+F+QMT+ +DIL+D+ +R+YSY RLDGS + +R + F+ SA
Sbjct: 504 KRKGHKVLIFSQMTRMMDILEDYFRMREYSYCRLDGSTKLMDRVDQMEKFNKVSA----- 558
Query: 402 SEAGGND---AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
ND FVFM+STRAGG+G+NL+AADTVIFY+ DWNPQ D QA+ R HRIGQ N
Sbjct: 559 GSGSANDDDNVFVFMLSTRAGGLGINLIAADTVIFYDSDWNPQQDNQAMDRCHRIGQKNE 618
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
++ LVTE++ E+ + +RA K +L V+
Sbjct: 619 IIVYRLVTENSFEDRMTQRAFEKRKLERVVI 649
>gi|343428014|emb|CBQ71539.1| probable CHD1-transcriptional regulator [Sporisorium reilianum
SRZ2]
Length = 1752
Score = 301 bits (771), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 182/490 (37%), Positives = 264/490 (53%), Gaps = 76/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK Q+ GL+WL + N +L DEMGLGKT+Q +SFLSYL S GPFLV+ PLS
Sbjct: 488 LKDFQMTGLNWLAYLWSKNENGILADEMGLGKTVQTVSFLSYLFHSCYQYGPFLVVVPLS 547
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W+++ + P L + Y+G R IR + K+ + F+VL+TTY
Sbjct: 548 TLPAWMNQFEHWAPDLNAIAYMGNSASREMIREYEFGPPKK---------MKFNVLVTTY 598
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ +L D+ L QI W Y +DEA RLKN + LY L F +LL+TGTP+QNN+ E
Sbjct: 599 EFILKDRAELGQIKWQYLAVDEAHRLKNSEAQLYEALNS-FHAAGKLLITGTPLQNNVKE 657
Query: 217 LWALMHFCMPSVFGTLNQF-LSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
L AL+HF P F F ++ AV IKE L + MLRR K+
Sbjct: 658 LIALLHFLRPDQFDLDVDFDINDVDQAV----------IKELHEKLDNV----MLRRLKK 703
Query: 276 KLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS-------------R 316
+++ LP + E++ +Q+++Y +IL + L ++ +
Sbjct: 704 DVIK----ELPTKSEKILRVEMSAMQQRMYKAILTRNYSLLSGATTAQFSLLNIAIELKK 759
Query: 317 TANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+NH L + SGK+V+LD LL +L GHRVL+F+QM + LD
Sbjct: 760 ASNHPYLFDGTEVISDNREETLKGLVMHSGKMVLLDKLLARLKADGHRVLIFSQMVRMLD 819
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL D++ LR Y ++RLDG++ +E R AI HF+ + G+ F F++STRAG
Sbjct: 820 ILSDYMSLRGYIHQRLDGTVSSEVRKKAIEHFNAE-----------GSPDFAFLLSTRAG 868
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL ADTVI ++ DWNPQ D QA+ RAHR+ HV +T+ TVEE ++ RA+
Sbjct: 869 GLGINLETADTVIIFDSDWNPQNDLQAMARAHRLNSKFHVSVFRFLTKDTVEEDVLERAK 928
Query: 480 RKLRLSHNVV 489
RK+ L + ++
Sbjct: 929 RKMVLEYAII 938
>gi|388856754|emb|CCF49541.1| probable CHD1-transcriptional regulator [Ustilago hordei]
Length = 1742
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 185/493 (37%), Positives = 267/493 (54%), Gaps = 76/493 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ LK Q+ GL+WL + N +L DEMGLGKT+Q +SFLSYL S GPFLV+
Sbjct: 524 SGTLKDFQMTGLNWLAYLWSKNENGILADEMGLGKTVQTVSFLSYLFHSCYQYGPFLVVV 583
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
PLS W++++ + P L L Y+G R IR + K+ + F+VL+
Sbjct: 584 PLSTLPAWMNQLEHWAPDLNTLAYIGNSASRAMIREYEFGPAKK---------IKFNVLV 634
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+ +L D+ L I W Y +DEA RLKN + LY L F +LL+TGTP+QNN
Sbjct: 635 TTYEFILKDRAELGHIRWQYLAVDEAHRLKNSEAQLYEALNS-FHAAGKLLITGTPLQNN 693
Query: 214 LSELWALMHFCMPSVFGTLNQF-LSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
+ EL AL+HF P F F ++ AV IK+ L + MLRR
Sbjct: 694 VKELIALLHFLRPDQFDLDVDFDINNVDQAV----------IKQLHQKLDNV----MLRR 739
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS----------- 315
K+ +V+ LP +E ++ +Q+++Y +IL + L ++
Sbjct: 740 LKKDVVK----ELPTKSEKILRVEMSAMQQRMYKAILTRNYSLLSGATTAQFSLLNIAIE 795
Query: 316 --RTANHQSL-----------QNT------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ +NH L Q+T SGK+V+LD LL +L GHRVL+F+QM +
Sbjct: 796 LKKASNHPYLFDGTEIISDNRQDTLKGLVMHSGKMVLLDKLLARLKADGHRVLIFSQMVR 855
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL D++ LR Y ++RLDG+I +E R AI HF+ + + F F++ST
Sbjct: 856 MLDILSDYMSLRGYIHQRLDGTISSEVRKKAIEHFNADRSPD-----------FAFLLST 904
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHR+ HV L+T+ TVEE ++
Sbjct: 905 RAGGLGINLETADTVIIFDSDWNPQNDLQAMARAHRLNSKFHVSVFRLLTKDTVEEDVLE 964
Query: 477 RAERKLRLSHNVV 489
RA+RK+ L + ++
Sbjct: 965 RAKRKMVLEYAII 977
>gi|66813908|ref|XP_641133.1| myb domain-containing protein [Dictyostelium discoideum AX4]
gi|60469158|gb|EAL67154.1| myb domain-containing protein [Dictyostelium discoideum AX4]
Length = 2373
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 191/504 (37%), Positives = 265/504 (52%), Gaps = 69/504 (13%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F +L+P+Q+EGL+WL + N +LGDEMGLGKT+Q++S L L+ GPFL
Sbjct: 503 FTKGNKLRPYQLEGLNWLSFCWHEQRNSILGDEMGLGKTVQSVSILETLRKVHGIRGPFL 562
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP---- 146
V+ PL+ W E +T + L Y + R I R ++K++ +
Sbjct: 563 VVAPLTTIPHWKREFENWT-DMNALVY-HDSGAGRPICRNYEFYLKDKDGGGGGASGGAS 620
Query: 147 ---LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRL 203
F+VL+TTY++ + D+ LS+IPW Y +IDEA RLKN S L LR + L
Sbjct: 621 GKITKFNVLITTYEMAITDRTHLSRIPWKYLVIDEAHRLKNKSCKLTIELRS-YSFDHLL 679
Query: 204 LMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
L+TGTP+QNN ELW+L++F P F L+QFL + D SS Q SL+
Sbjct: 680 LLTGTPLQNNTQELWSLLNFLDPKQFSNLDQFLLEYGDLKESS----------QVESLQA 729
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEI--TVLQKKVYASILRKEL------------PK 309
IL ++LRR K+++ + + E+ T +QKK Y +I K P
Sbjct: 730 ILKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLRKGGKSNQGPS 789
Query: 310 LLALS---SRTANHQSLQN---------------------TASGKLVVLDLLLKKLYNSG 345
LL + + NH L ASGKLV++D LL KL
Sbjct: 790 LLNIMMELRKCCNHPYLTKGVEQSETSSIKDKDQIFQKLIQASGKLVLIDKLLPKLKLGN 849
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
H+VL+F+QM LDIL D+L R Y +ER+DGSI+ +R AAI FS +
Sbjct: 850 HKVLIFSQMVSVLDILDDYLTYRGYPHERIDGSIKGNDRQAAIDRFSKPDS--------- 900
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
D FVF++ TRAGG+G+NL AADTVI ++ DWNPQ D QA R HRIGQ V LV
Sbjct: 901 --DRFVFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYRLV 958
Query: 466 TEHTVEEVIMRRAERKLRLSHNVV 489
T++T E ++ +A +KL L V+
Sbjct: 959 TKNTYERLMFDKASKKLGLDRAVL 982
>gi|428177642|gb|EKX46521.1| hypothetical protein GUITHDRAFT_70514 [Guillardia theta CCMP2712]
Length = 535
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/550 (33%), Positives = 290/550 (52%), Gaps = 71/550 (12%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
+ P+Q++GL WL+ ++ G +LGDEMGLGKTLQ IS L +LK + GP +V+ PLS
Sbjct: 1 MHPYQLDGLKWLVNQHDTGAGGILGDEMGLGKTLQVISLLGFLKTVRGEDGPHIVIAPLS 60
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
V + WV+E+ ++ P+L + + G + +R I+R + K FDV+ TTY
Sbjct: 61 VMNNWVTEIKRWCPQLRAVPFHGPQSERERIKREKLIYGK------------FDVMCTTY 108
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++++ D + W Y ++DEA R+KN + + +R RLL+TGTP+QNN+ E
Sbjct: 109 EMLVADTYTCQRFHWGYIVLDEAHRIKNEKTQMGQAVR-RLRSSHRLLITGTPLQNNMHE 167
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKD--AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LW+L++F P V + F +K +S+P K+ ++ +L MLRR K
Sbjct: 168 LWSLLNFLYPEVLSNADTFDKEWKSNSKPEENSSPLNEKL---LSAAHALLGPLMLRRLK 224
Query: 275 QKLVECGHLMLPPLTEITVL------QKKVYASILRKELPKLLALSSRTANHQSLQN--- 325
++ + +PP TEI +L Q+ Y+ +L E L A S +T ++ L +
Sbjct: 225 SDVLS--SMQIPPKTEIKILVPLTEMQRFWYSKMLTGECASL-AGSGQTDAYKRLNSLVM 281
Query: 326 ---------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
ASGK++VLD LL KL G +VL+F+Q T L
Sbjct: 282 QLRKVCNHPYLFEEADVNSGWTDEAIVQASGKMIVLDKLLTKLQKEGRKVLVFSQFTSML 341
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
D+L DF+ R+Y + RLDGS R I F + +D FV++ISTRA
Sbjct: 342 DVLGDFMHFRRYKFLRLDGSTSVARRRYEIACF-----------QNPKSDYFVYLISTRA 390
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AADTV+ Y+ DWNP +D QA RAHR GQ V L++ HTVE+ I++ A
Sbjct: 391 GGLGINLTAADTVVLYDSDWNPSIDSQAQDRAHRFGQKKPVSVYRLISRHTVEQRILQVA 450
Query: 479 ERKLRLSHNVVGDDVVDRE-VKERTAVETDDLRSII-FGLHLFDPKAINNEESDDLRLSG 536
E K ++ V+ D + E V + ++ +I +G+ N+++ D+LR +
Sbjct: 451 ENKSCMNAMVMQDGGPEMEGVSGPKGMSMAEIVKMIEYGMRCI-VSGDNSKDVDELRAAS 509
Query: 537 LNSMVEKVIA 546
+ +V++ A
Sbjct: 510 FDEIVDRAKA 519
>gi|323455077|gb|EGB10946.1| hypothetical protein AURANDRAFT_62321 [Aureococcus anophagefferens]
Length = 1218
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/488 (37%), Positives = 264/488 (54%), Gaps = 69/488 (14%)
Query: 44 GLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVS 103
GL+W+IR G+N +L DEMGLGKTLQ+IS L YL + GP LVL P + W++
Sbjct: 139 GLNWMIRLRNNGLNGILADEMGLGKTLQSISMLGYLHEFKRINGPHLVLVPKTTLSNWMN 198
Query: 104 EMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQ 163
E ++ P L ++ G +E+R + S + P +DV++TTY+V +++
Sbjct: 199 EFRRWLPALTAFKFHGSKEERGYM----------TSGILVSEPRAWDVVVTTYEVANLEK 248
Query: 164 GFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHF 223
L++I W + IIDEA R+KN ++ L +R RLL+TGTP+QNNL ELWAL++F
Sbjct: 249 TALAKIAWRFVIIDEAHRIKNENAQLSKTVR-LLRTENRLLITGTPLQNNLHELWALLNF 307
Query: 224 CMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHL 283
+P VF + +F F + + A +R L +L F+LRR K + +
Sbjct: 308 LLPDVFQSAERFDDLFDLQIDDADAKQR-----LIGQLHKLLRPFVLRRLKADVEKS--- 359
Query: 284 MLPP------LTEITVLQKKVYASILRKELP----------------KLLALSSRTANHQ 321
LPP T +T Q+ VY L +E+ L+ + NH
Sbjct: 360 -LPPKSETILFTSMTATQRDVYKQCLLREIDVVQGGSGKGGGRTAVLNLVMQLRKCCNHP 418
Query: 322 SLQNT---------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLE 366
L A GKLV+LD LL +L + GHRVL+F+QMT+ LDIL+DF+
Sbjct: 419 YLFPNVEDRSLPVLGEHLVGACGKLVLLDKLLTRLKDKGHRVLIFSQMTRMLDILEDFMV 478
Query: 367 LRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLV 426
+R Y Y R+DG E R I ++ A ++ F F++STRAGG+G+NL
Sbjct: 479 MRAYDYCRIDGKTAHELREEYIDAYN-----------APNSEKFAFLLSTRAGGLGINLQ 527
Query: 427 AADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSH 486
ADT + Y+ DWNPQ D QA+ R HRIGQ V LVTEH+VEE ++ RA++KL+L
Sbjct: 528 TADTCVLYDSDWNPQADLQAMDRCHRIGQTKPVHVYRLVTEHSVEEKVVERAQQKLKLD- 586
Query: 487 NVVGDDVV 494
VV D+++
Sbjct: 587 AVVTDELL 594
>gi|344253124|gb|EGW09228.1| Chromodomain-helicase-DNA-binding protein 1-like [Cricetulus
griseus]
Length = 810
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/458 (39%), Positives = 247/458 (53%), Gaps = 68/458 (14%)
Query: 64 MGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQ 123
MGLGKT Q I+ L YL GPFL+LCPLSV W E+ +F P L + YVG +E+
Sbjct: 1 MGLGKTCQTIALLVYLVGRLNDEGPFLILCPLSVLSNWKEELERFAPGLSCVTYVGGKEE 60
Query: 124 RRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLK 183
R ++++ + + F VLLTTY++ L D FL W +DEA RLK
Sbjct: 61 RAHLQQGLQQEPH------------FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLK 108
Query: 184 NPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFG--TLNQFLSTFKD 241
N SS+L+ L E F + RLL+TGTP+QN+L EL++L+ P +F + F+ ++D
Sbjct: 109 NQSSLLHRTLSE-FSVVFRLLLTGTPVQNSLQELYSLLSVVEPDLFCREQVEDFVQRYQD 167
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITVLQKKVYAS 301
S + + L+ + + K+ V H M + LQK+ Y +
Sbjct: 168 IEKESKSANELHRLLRPFLLRRVKAQVATELPKKTEVVIYHGM-------SALQKQYYKA 220
Query: 302 ILRKELPKLLALSSRTANHQSLQNT------------------------------ASGKL 331
IL K+L A + A LQN ASGKL
Sbjct: 221 ILMKDLD---AFENEMAKKVKLQNVLTQLRKCVDHPYLFDGVEPEPFEIGEHLIEASGKL 277
Query: 332 VVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHF 391
+LD LL LY+ GHRVLLF+QMT LDILQD+++ R YSYER+DGS+R EER AI++F
Sbjct: 278 HLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF 337
Query: 392 SVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAH 451
G FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAH
Sbjct: 338 -------------GKEPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAH 384
Query: 452 RIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
RIGQ V I L+ TVEE++ R+A KL+L++ V+
Sbjct: 385 RIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNMVM 422
>gi|410049633|ref|XP_001170676.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 4
[Pan troglodytes]
Length = 1318
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/462 (39%), Positives = 261/462 (56%), Gaps = 68/462 (14%)
Query: 64 MGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQ 123
MGLGKT+Q ISFLSYL GPFL++ PLS W E + P++ V+ Y+G+
Sbjct: 1 MGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMS 60
Query: 124 RRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLK 183
R IR YE + Q++ L F+ L+TTY+++L D+ L I W + +DEA RLK
Sbjct: 61 RNTIRE--YEWIHSQTKR-----LKFNALITTYEILLKDKTVLGSINWAFLGVDEAHRLK 113
Query: 184 NPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAV 243
N S+LY L + F RLL+TGTP+QN+L ELW+L+HF MP F +F F++
Sbjct: 114 NDDSLLYKTLID-FKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF----EFWEDFEE-- 166
Query: 244 HSSSAPKRGKIKEQ-FTSLKGILSAFMLRRTKQKLVECGHLMLPPL--TEITVLQKKVYA 300
GK +E + SL +L F+LRR K+ + + + + E++ LQK+ Y
Sbjct: 167 ------DHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYK 220
Query: 301 SILRKELPKLLALSSR---------------TANHQSL-----QNT-------------A 327
IL + K LA +R NH L +N +
Sbjct: 221 WILTRNY-KALAKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRS 279
Query: 328 SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAA 387
SGKL++LD LL +L G+RVL+F+QM + LDIL ++L ++ Y ++RLDGSI+ E R A
Sbjct: 280 SGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQA 339
Query: 388 IRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQAL 447
+ HF+ A G++ F F++STRAGG+G+NL +ADTV+ ++ DWNPQ D QA
Sbjct: 340 LDHFN-----------ADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQ 388
Query: 448 QRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
RAHRIGQ V LVT+ TVEE I+ RA++K+ L H V+
Sbjct: 389 ARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVI 430
>gi|242023690|ref|XP_002432264.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus
humanus corporis]
gi|212517673|gb|EEB19526.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus
humanus corporis]
Length = 1999
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 188/499 (37%), Positives = 263/499 (52%), Gaps = 71/499 (14%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L +Q+EGL+WL + G++ +L DEMGLGKT+Q I+FL L GPFLV PL
Sbjct: 702 QLHEYQMEGLNWLRYSWGQGIDTILADEMGLGKTIQTITFLYSLYKEGHCKGPFLVSAPL 761
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR---TMYEHVKEQSQMSNV--SPLPFD 150
S W E + P + YVG+++ R IR + E S+ + + S + F+
Sbjct: 762 STIINWEREFETWAPDFYCVTYVGDKDSRAVIRENELSFEEGAVRGSRATKIKASSIKFN 821
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLT+Y++V +D L I W ++DEA RLK+ S + VL + + +LL+TGTP+
Sbjct: 822 VLLTSYELVSIDAACLGSIDWAVLVVDEAHRLKSNQSKFFRVL-AGYNISYKLLLTGTPL 880
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL+ L++F F L F + F D +EQ T L +L ML
Sbjct: 881 QNNLEELFHLLNFMCRDKFSDLAAFQNEFADISK----------EEQVTKLHDLLGPHML 930
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKEL----PK----------L 310
RR K +++ +P +E V +QKK Y IL + PK +
Sbjct: 931 RRLKTDVLK----NMPAKSEFIVRVELSPMQKKYYKWILTRNFEALNPKGGGQQVSLLNI 986
Query: 311 LALSSRTANHQSLQNT--------------------ASGKLVVLDLLLKKLYNSGHRVLL 350
+ + NH L + ASGKL++L +LK L GHRVL+
Sbjct: 987 MMDLKKCCNHPYLFSAAAEEAPLSANGTYELQGLIKASGKLILLSKMLKLLREQGHRVLI 1046
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMT+ LD+L+D+LE Y YER+DGSI R AI F+ A G F
Sbjct: 1047 FSQMTKMLDLLEDYLEGEGYKYERIDGSITGNLRQEAIDRFN-----------APGAPQF 1095
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
F++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT ++V
Sbjct: 1096 AFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQSNKVMIYRFVTRNSV 1155
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE + + A+RK+ L+H VV
Sbjct: 1156 EERVTQVAKRKMMLTHLVV 1174
>gi|198466497|ref|XP_002135204.1| GA23929 [Drosophila pseudoobscura pseudoobscura]
gi|198150627|gb|EDY73831.1| GA23929 [Drosophila pseudoobscura pseudoobscura]
Length = 2036
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 187/502 (37%), Positives = 261/502 (51%), Gaps = 77/502 (15%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L P+Q+EG++WL + ++ +L DEMGLGKT+Q ++FL L GPFLV PL
Sbjct: 735 QLHPYQIEGINWLRYSWGQAIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPL 794
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL-----PFD 150
S W E + P + Y+G+++ R IR + + S VS L F+
Sbjct: 795 STLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFN 854
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+TGTP+
Sbjct: 855 VLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YSIAYKLLLTGTPL 913
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL+ L++F F L F F D +EQ L +L ML
Sbjct: 914 QNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLGPHML 963
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTA------ 318
RR K +++ +P +E V +QKK Y IL K AL+S+T
Sbjct: 964 RRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYE---ALNSKTGGGSCSL 1016
Query: 319 -----------NHQSL--------------------QNTASGKLVVLDLLLKKLYNSGHR 347
NH L A+GKLV+L +L++L + HR
Sbjct: 1017 INIMMDLKKCCNHPYLFPSAAEEAQTAAGGLYEINSLTKAAGKLVLLSKMLRQLKSQNHR 1076
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QMT+ LDIL+DFLE +Y YER+DG I R AI F+ A G
Sbjct: 1077 VLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTVRQEAIDRFN-----------APGA 1125
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 1126 QQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTR 1185
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
++VEE + + A+RK+ L+H VV
Sbjct: 1186 NSVEERVTQVAKRKMMLTHLVV 1207
>gi|432920325|ref|XP_004079948.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Oryzias
latipes]
Length = 1963
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/497 (37%), Positives = 258/497 (51%), Gaps = 73/497 (14%)
Query: 40 HQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTD 99
+Q+EGL+WL + G + +L DEMGLGKT+Q I FL L + GPFLV PLS
Sbjct: 755 YQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLFKEGHTKGPFLVSAPLSTII 814
Query: 100 GWVSEMAKFTPKLEVLRYVGEREQRRNIRR-------TMYEHVKEQSQMSNVSPLPFDVL 152
W E + P V+ Y G+++ R IR T + K+ ++ +P+ F VL
Sbjct: 815 NWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFSFDDTAVKGGKKAFKLRREAPIKFHVL 874
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LT+Y++V +DQ L I W ++DEA RLKN S + L + + + +LL+TGTP+QN
Sbjct: 875 LTSYELVTIDQTALKSIEWACLVVDEAHRLKNNQSKFFRRLND-YKIDYKLLLTGTPLQN 933
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL EL+ L++F P+ F L FL F D ++Q L +L MLRR
Sbjct: 934 NLEELFHLLNFLTPNRFNNLEGFLEEFADISK----------EDQIKKLHDLLGPHMLRR 983
Query: 273 TKQKLVECGHLMLPPLTEITVL------QKKVYASILRKELPKLLALSS----------- 315
K + + +P T+ ++ +K Y IL K L +
Sbjct: 984 LKADVFK----NMPAKTDTYMIFFFFFKSRKYYKLILTKNFEALNSKGGGNQVSLLNIMM 1039
Query: 316 ---RTANHQSL--------QNT------------ASGKLVVLDLLLKKLYNSGHRVLLFA 352
+ NH L Q T ASGKL++L +L+KL GHRVL+F+
Sbjct: 1040 DLKKCCNHPYLFPVASMEAQKTPSGAYEGSALTKASGKLMLLQKMLRKLKEQGHRVLVFS 1099
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QMT+ LD+L+DFL+ Y YER+DG I R AI F+ A + F F
Sbjct: 1100 QMTKMLDLLEDFLDHEGYKYERIDGGITGALRQEAIDRFNAPGACQ-----------FCF 1148
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++STRAGG+G+NL ADTVI ++ DWNP D QA RAHRIGQ N V+ VT +VEE
Sbjct: 1149 LLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEE 1208
Query: 473 VIMRRAERKLRLSHNVV 489
I + A+RK+ L+H VV
Sbjct: 1209 RITQVAKRKMMLTHLVV 1225
>gi|242818381|ref|XP_002487106.1| RSC complex subunit (Sth1), putative [Talaromyces stipitatus ATCC
10500]
gi|218713571|gb|EED12995.1| RSC complex subunit (Sth1), putative [Talaromyces stipitatus ATCC
10500]
Length = 1420
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 181/501 (36%), Positives = 262/501 (52%), Gaps = 72/501 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL + + GPFLV+
Sbjct: 541 VGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEVKKNSGPFLVI 600
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G R+ Q + F VL
Sbjct: 601 VPLSTLTNWHLEFDKWAPSVTKVVYKGPPAVRK-------------QQQQTIRYGQFQVL 647
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS+I W + I+DE R+KN S L + L +++ RL++TGTP+QN
Sbjct: 648 LTTYEYIIKDRPLLSKIKWQHMIVDEGHRMKNAQSKLSSTLTQYYNTRYRLILTGTPLQN 707
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELWAL++F +PS+F ++ F F ++ R + E+ L +L
Sbjct: 708 NLPELWALLNFVLPSIFKSVKSFDEWFNTPFANTGNQDRIDLTEEEQLLVIRRLHKVLRP 767
Query: 268 FMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILR----------------K 305
F+LRR K+ + + LP E + LQ K+Y +L +
Sbjct: 768 FLLRRLKKDVEKD----LPDKQERVIKCRSSALQAKLYKQLLTHNKMVVSDGKGGKIGMR 823
Query: 306 ELPKLLALSSRTANH-----------------QSLQNTASGKLVVLDLLLKKLYNSGHRV 348
L +L + NH L +GK +LD +L K +GHRV
Sbjct: 824 GLSNMLMQMRKLCNHPFVFEPVEDQMNPGRGTNDLIWRTAGKFELLDRVLPKFKATGHRV 883
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
LLF QMTQ ++I++DFL R Y RLDGS ++++R ++ F+ A +D
Sbjct: 884 LLFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDDRSELLKLFN-----------APNSD 932
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V + L+T +
Sbjct: 933 YFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSN 992
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
+VEE I+ RA+ KL + V+
Sbjct: 993 SVEEKILGRAQFKLDMDGKVI 1013
>gi|195166785|ref|XP_002024215.1| GL22908 [Drosophila persimilis]
gi|194107570|gb|EDW29613.1| GL22908 [Drosophila persimilis]
Length = 1898
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 187/502 (37%), Positives = 261/502 (51%), Gaps = 77/502 (15%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L P+Q+EG++WL + ++ +L DEMGLGKT+Q ++FL L GPFLV PL
Sbjct: 593 QLHPYQIEGINWLRYSWGQAIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPL 652
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL-----PFD 150
S W E + P + Y+G+++ R IR + + S VS L F+
Sbjct: 653 STLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFN 712
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+TGTP+
Sbjct: 713 VLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YSIAYKLLLTGTPL 771
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL EL+ L++F F L F F D +EQ L +L ML
Sbjct: 772 QNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLGPHML 821
Query: 271 RRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT------- 317
RR K +++ +P +E V +QKK Y IL K AL+S+T
Sbjct: 822 RRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYE---ALNSKTGGGSCSL 874
Query: 318 ----------ANHQSL--------------------QNTASGKLVVLDLLLKKLYNSGHR 347
NH L A+GKLV+L +L++L + HR
Sbjct: 875 INIMMDLKKCCNHPYLFPSAAEEAQTAAGGLYEINSLTKAAGKLVLLSKMLRQLKSQNHR 934
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QMT+ LDIL+DFLE +Y YER+DG I R AI F+ A G
Sbjct: 935 VLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTVRQEAIDRFN-----------APGA 983
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 984 QQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTR 1043
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
++VEE + + A+RK+ L+H VV
Sbjct: 1044 NSVEERVTQVAKRKMMLTHLVV 1065
>gi|448115219|ref|XP_004202771.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
gi|359383639|emb|CCE79555.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
Length = 1375
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 194/555 (34%), Positives = 293/555 (52%), Gaps = 86/555 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q +SFLS+L +++ GP L
Sbjct: 336 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPHL 395
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W K+ P + + Y+G R+ +R + K+ + F+
Sbjct: 396 VVVPLSTITSWQETFEKWAPDVNCVYYLGNSAARKTVRDYEFYQNKK---------IKFN 446
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
+LLTTY+ VL D+ L I W + +DEA RLKN S LY L+ F + RLL+TGTP+
Sbjct: 447 ILLTTYEYVLKDRSELGSIKWQFLAVDEAHRLKNEESSLYESLK-SFKVGNRLLITGTPL 505
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF-TSLKGILSAFM 269
QNN+ EL AL +F MP F + P R +EQ+ L+ + F+
Sbjct: 506 QNNIKELNALCNFLMPGRFNIGQEI---------DFETPNRE--QEQYIKDLQKNIQPFI 554
Query: 270 LRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS--------- 314
LRR K+ + + LP + E++ LQ + Y +IL K L A +
Sbjct: 555 LRRLKKDVEKS----LPSKSERILRVELSDLQTEYYRNILTKNYSALNAGNKGSQISLLN 610
Query: 315 -----SRTANHQSLQNTA-----------------------SGKLVVLDLLLKKLYNSGH 346
+ +NH L + A SGK+V+L+ LL +L GH
Sbjct: 611 VVSELKKASNHPYLFDGAEERALAKASSTSRDNILRGIIMSSGKMVLLEQLLNRLKKEGH 670
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDIL D+L ++ ++RLDG + + +R +I HF+ A
Sbjct: 671 RVLIFSQMVRILDILGDYLSIKGLQFQRLDGGVPSSQRRISIDHFN-----------APD 719
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+ FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV V+
Sbjct: 720 SKDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVS 779
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVDR-EVKERTAVETDDLRSII-FGL-HLFDPKA 523
+ T+EE I+ RA +K+ L + ++ + D K ++ T +L I+ FG ++F KA
Sbjct: 780 KDTIEEEILERARKKMILEYAIISLGITDNTSQKSKSDPSTGELSEILKFGAGNMF--KA 837
Query: 524 INNEES-DDLRLSGL 537
+N++ +DL L +
Sbjct: 838 NDNQKKLEDLNLDDV 852
>gi|297807991|ref|XP_002871879.1| hypothetical protein ARALYDRAFT_488814 [Arabidopsis lyrata subsp.
lyrata]
gi|297317716|gb|EFH48138.1| hypothetical protein ARALYDRAFT_488814 [Arabidopsis lyrata subsp.
lyrata]
Length = 1061
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/489 (34%), Positives = 263/489 (53%), Gaps = 62/489 (12%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ +Q+EGL W++ Y N +L DEMGLGKT+Q I+ ++YL S+ GP L++ P
Sbjct: 383 GELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKNVHGPHLIVAP 442
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
+V W +E A + P + Y G +E+R IR + ++ F VL+T
Sbjct: 443 KAVLPNWENEFATWAPSISAFLYDGSKEKRTEIR-------------ARIAGGKFSVLIT 489
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
YD+++ D+ FL +I W Y I+DE RLKN L L + + RRLL+TGTPIQN+L
Sbjct: 490 HYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSL 549
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF--TSLKGILSAFMLRR 272
ELW+L++F +P +F ++ F F + +E L ++ F+LRR
Sbjct: 550 QELWSLLNFLLPHIFNSIQNFEEWFNTPFAERGSASLTDEEELLIINRLHHVIRPFLLRR 609
Query: 273 TKQKLVECGHLMLPPLTEITV-LQKKVYASILRKELPKL--LALSSRTANHQSLQN---- 325
K ++ + LP T++ + + + K++ + + L S +SLQN
Sbjct: 610 KKSEVEK----FLPGKTQVILKCDMSAWQKLYYKQVTDVGRVGLHSGNGKSKSLQNLTMQ 665
Query: 326 -------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
ASGK +LD LL KL +GHR+LLF+QMT+ +D+
Sbjct: 666 LRKCCNHPYLFVGGDYNMWKKPEIVRASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDL 725
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L+ +L L Y Y RLDG+ + ++R ++ F+ + F+F++STRAGG
Sbjct: 726 LEIYLTLNDYMYLRLDGTTKTDQRGVLLKQFNEPES-----------PYFMFLLSTRAGG 774
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+GLNL ADT+I ++ DWNPQ+D+QA RAHRIGQ V LV+ ++EEVI+ RA++
Sbjct: 775 LGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQ 834
Query: 481 KLRLSHNVV 489
K+ + V+
Sbjct: 835 KMGIDAKVI 843
>gi|390367174|ref|XP_003731194.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like
[Strongylocentrotus purpuratus]
Length = 2202
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 262/503 (52%), Gaps = 74/503 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L +Q+EGL+WL + + +L DEMGLGKT+Q I+FL L S GPFL+ P
Sbjct: 770 GKLHDYQLEGLNWLRYSWHNDICTILADEMGLGKTIQTIAFLYSLYKEGHSKGPFLISAP 829
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY-------EHVKEQSQMSNVSPL 147
LS W E + P V+ Y G+++ R IR + + K+ +M S +
Sbjct: 830 LSTIINWEREFEFWAPDFYVVTYTGDKDSRAIIRENEFSFEDDAVKGGKKAYKMRQGSLV 889
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
F VLLT+Y+++ +D G L + W ++DEA RLKN S + +L + + RLL+TG
Sbjct: 890 KFHVLLTSYELISIDAGTLQSVNWDVLVVDEAHRLKNNQSRFFRILSGYNIR-FRLLLTG 948
Query: 208 TPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSA 267
TP+QNNL EL+ L++F P F L FL+ F D ++Q L +L
Sbjct: 949 TPLQNNLEELFHLLNFMSPDEFNNLQHFLAEFADISK----------EDQIKKLHDMLGP 998
Query: 268 FMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS------ 315
MLRR K +++ +P +E V LQKK Y IL + L ++
Sbjct: 999 HMLRRLKADVLKG----MPSKSEFIVRVELSPLQKKYYKYILTRNFQALNTKAAGGGSVS 1054
Query: 316 ---------RTANH-----------QSLQNTA---------SGKLVVLDLLLKKLYNSGH 346
+ NH Q LQN A GKLV+L +L+ L H
Sbjct: 1055 LLNIMMDLKKCCNHPYLFPTAAADAQRLQNGAFEVVSLIKSCGKLVLLCKMLRMLKKDNH 1114
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QMT+ LD+L+DFLE Y YER+DG + R AI F+ A G
Sbjct: 1115 RVLIFSQMTRMLDLLEDFLEGEGYKYERIDGGVTGGLRQEAIDRFN-----------APG 1163
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+ FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 1164 AEQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQSNKVMIYRFVT 1223
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
+VEE I + A++K+ L+H VV
Sbjct: 1224 RASVEERITQVAKKKMMLTHLVV 1246
>gi|313228968|emb|CBY18120.1| unnamed protein product [Oikopleura dioica]
Length = 996
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 185/490 (37%), Positives = 259/490 (52%), Gaps = 68/490 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +Q+ GL+W+I Y GV+ +L DEMGLGKTLQ IS + YLK Q GP LV+ P
Sbjct: 120 GKMRDYQIRGLNWMIGLYEKGVSGILADEMGLGKTLQTISMVGYLKNYQKCNGPHLVIVP 179
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E ++ P L+V + N R + V Q FDVL+T
Sbjct: 180 KSTIQNWMNEFDRWVPSLKVEMMNASK----NERAIFIKDVLTQGD--------FDVLVT 227
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +M++ L +I W Y IIDEA R+KN S L +LRE F RLL+TGTP+QNNL
Sbjct: 228 TYEQCMMEKSSLKKINWRYCIIDEAHRIKNEKSKLSLILRE-FRTTNRLLLTGTPLQNNL 286
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P +F + F F K G+ + + L +L FMLRR K
Sbjct: 287 HELWALLNFLLPDIFIDADNFDEYF-------DQKKLGQELDLISRLHMLLKPFMLRRVK 339
Query: 275 QKLVECGHLMLPPLTEITV----LQKKVYASILRKE----------------LPKLLALS 314
+ + L+ L I V +QK Y IL K+ L +L
Sbjct: 340 ADVEKS--LLPKKLVNIYVPMSEMQKNWYKKILLKDIDILNTGGDKGGGKMRLMNILMHL 397
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A GK+V+LD LLKK +G RVLLF Q T LD
Sbjct: 398 RKCTNHPYLFDGAEPGPPYTTDQHIVDNCGKMVILDKLLKKCKANGDRVLLFTQFTSMLD 457
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
I +D+ R Y Y RLDG +R +I ++ A ++ F+FM+ST+AG
Sbjct: 458 IFEDYCLWRDYKYCRLDGGTDHADRTESIDAYN-----------APNSEKFLFMLSTKAG 506
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL+ A+ VI Y+ DWNPQ D QA+ RAHRIGQ V ++T+ +V+E I+ R+E
Sbjct: 507 GLGINLMTANVVIIYDSDWNPQNDLQAMDRAHRIGQKKQVYVYRMITDESVDERIIERSE 566
Query: 480 RKLRLSHNVV 489
K+RL V+
Sbjct: 567 LKMRLDSVVI 576
>gi|346971605|gb|EGY15057.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Verticillium dahliae VdLs.17]
Length = 1426
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 294/557 (52%), Gaps = 82/557 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A V +LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS ++YL ++
Sbjct: 524 TEQASILVGGKLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIERKLQ 583
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E K+ P + + Y G N R+ + +++
Sbjct: 584 DGPYLVIVPLSTLTNWTLEFEKWAPSVTKIVYKGPP----NARKQQQDKIRQGR------ 633
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L +++++ RL++
Sbjct: 634 ---FQVLLTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNQNSKLTATIQQYYHTRFRLIL 690
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNL+ELWA+++F +P++F ++ F F ++ + + E+
Sbjct: 691 TGTPLQNNLTELWAMLNFVLPNIFKSVKTFDEWFNTPFANTGGQDKMDLTEEEQILVIRR 750
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILR---------- 304
L +L F+LRR K+ + + LP TE + LQ K+Y ++
Sbjct: 751 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQTKLYKQMVTHNKIVVSDGQ 806
Query: 305 ------KELPKLLALSSRTANH-------QSLQNT----------ASGKLVVLDLLLKKL 341
+ L ++ + NH +++ N +GK +LD +L K
Sbjct: 807 GGKTGARGLSNMIMQLRKLCNHPFVFGEVENVMNPLNISDDKLWRTAGKFELLDRILPKY 866
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+GHRVL+F QMT +DI++D+L R + Y RLDG+ +++ER ++ F+
Sbjct: 867 KATGHRVLMFFQMTAIMDIMEDYLRYRNFQYMRLDGTTKSDERSDLLKDFN--------- 917
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
A + F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 918 --APDSPYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 975
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDD---LRSIIFGLHL 518
+ L++ ++VEE I+ RA KL + V+ D + + ETD LR+++ L
Sbjct: 976 LRLISSNSVEEKILERARFKLDMDGKVIQAGRFDNK-----STETDRDAMLRTLLESADL 1030
Query: 519 FDPKAINNEESDDLRLS 535
D + + EE DD L+
Sbjct: 1031 AD--SGDQEEMDDDELN 1045
>gi|301092506|ref|XP_002997108.1| chromatin structure-remodeling complex subunit snf21-like protein
[Phytophthora infestans T30-4]
gi|262111604|gb|EEY69656.1| chromatin structure-remodeling complex subunit snf21-like protein
[Phytophthora infestans T30-4]
Length = 1309
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 272/510 (53%), Gaps = 65/510 (12%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +LK +Q+ GL W++ Y +N +L DEMGLGKT+Q+IS L+Y+ + + GPFLV+
Sbjct: 480 VGGDLKEYQLRGLQWMVSLYDNHLNGILADEMGLGKTIQSISLLTYVTEVKHNHGPFLVV 539
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS WV+E K+ P L ++ Y G + R+ + H +E ++ F+VL
Sbjct: 540 VPLSTLSNWVNEFKKWAPDLVLVVYKGPPQVRKEL------HKQE------MASCQFNVL 587
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ L + W Y I+DE R+KN S L + RLL+TGTP+QN
Sbjct: 588 LTTYEYIMKDKHVLRKYDWQYIIVDEGHRMKNAQSKFAMTLGSMYTSRNRLLLTGTPLQN 647
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTF-KDAVHSSSAPKRGKIKEQ-----FTSLKGILS 266
+L ELWAL++F +P++F +++ F F K S ++ ++ L +L
Sbjct: 648 SLPELWALLNFLLPTIFESVDTFEQWFSKPFAQFSGNGDSNELSDEERMLIINRLHQVLR 707
Query: 267 AFMLRRTK-----------QKLVEC-----GHLMLPPLTEITVL---------QKKVYAS 301
F+LRR K +K+++C +M + E L +KK A
Sbjct: 708 PFLLRRVKASVLDQLPDKVEKVLKCELSGWQKIMYRRIQEGGALLMETTDDSGKKKGKAK 767
Query: 302 ILRKELPKLLALSSRTANHQSLQNT-----------ASGKLVVLDLLLKKLYNSGHRVLL 350
K L +L + NH L T +SGK +LD +L KL +GHRVL+
Sbjct: 768 YTSKGLSNVLMQLRKVCNHPYLFQTNGYQIDFDIVRSSGKFELLDRMLPKLKAAGHRVLM 827
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QMTQ + +L+D+ R + Y RLDGS A+ER + F+ A + F
Sbjct: 828 FSQMTQLMHVLEDYFNYRGFRYLRLDGSTSADEREQRMFMFN-----------ASDSPFF 876
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+F++STRAGG+GLNL ADTVI ++ DWNP +D QA RAHRIGQ N V LVT V
Sbjct: 877 IFLLSTRAGGLGLNLATADTVIIFDSDWNPAMDAQAQDRAHRIGQKNEVRVFRLVTNSPV 936
Query: 471 EEVIMRRAERKLRLSHNVVGDDVVDREVKE 500
EE I+ RA K+ +++ VV + + KE
Sbjct: 937 EEKILSRATDKMNMNNLVVEAGKFNNKSKE 966
>gi|168035589|ref|XP_001770292.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162678509|gb|EDQ64967.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1031
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 190/514 (36%), Positives = 282/514 (54%), Gaps = 72/514 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y GVN +L DEMGLGKTLQ IS L+YL GP +V+
Sbjct: 163 INGKMREYQLAGLNWLIRLYENGVNGILADEMGLGKTLQTISLLAYLHEYCGISGPHMVV 222
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++ G +E+R R + K FD+
Sbjct: 223 APKSTLGNWMNEIRRFCPVLRAFKFHGNQEERNYQRDELLVAGK------------FDIC 270
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN SS+L +R F RLL+TGTP+QN
Sbjct: 271 VTSFEMAIKERTALRKFSWRYIIIDEAHRIKNESSILAKTMR-LFSTNYRLLITGTPLQN 329
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + TF + S + ++ +Q L +L F+LRR
Sbjct: 330 NLHELWALLNFLLPEIFSSA----ETFDEWFQISGENDQHEVVQQ---LHKVLRPFLLRR 382
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ LQK+ Y ++L+K++ +LL ++
Sbjct: 383 LKSD-VERG---LPPKKETILKVGMSTLQKQYYRALLQKDMDAINTGGERKRLLNIAMQL 438
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 439 RKCCNHPYLFEGAEPGPPYTTGEHLVETAGKMVLLDKLLPKLKQRQSRVLIFSQMTRLLD 498
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ + R Y Y R+DG+ ++R ++I F+ A ++ F F++STRAG
Sbjct: 499 ILEDYCQFRSYQYCRIDGNTSGDDRESSIDQFN-----------APNSEKFCFLLSTRAG 547
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE T+EE ++ RA
Sbjct: 548 GLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEFTIEEKVIERAY 607
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
+KL L V+ + E+ AV D+L ++
Sbjct: 608 KKLALDALVIQQG----RLAEQKAVNKDELLQMV 637
>gi|260945000|ref|XP_002616798.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720]
gi|238850447|gb|EEQ39911.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720]
Length = 1259
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 284/532 (53%), Gaps = 82/532 (15%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q ++FLS+L +++ GP L
Sbjct: 201 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHL 260
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP-F 149
V+ PLS W K++P + + Y+G E R+ IR + + NV+ P F
Sbjct: 261 VVVPLSTIPAWQETFEKWSPDVNCIYYLGNTEARKKIR---------EFEFYNVTKKPKF 311
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
++LLTTY+ +L D+ L W + +DEA RLKN S LY L+ F + RLL+TGTP
Sbjct: 312 NILLTTYEYILKDRNELGAFKWQFLAVDEAHRLKNAESSLYESLKS-FKVANRLLITGTP 370
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNN+ EL AL F MP F +++Q + AP K +E L+ + ++
Sbjct: 371 LQNNIKELAALCDFLMPGRF-SIDQEIDF--------DAPD-DKQEEYIKHLQSSIKPYI 420
Query: 270 LRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKL------------- 310
LRR K+ + + LP T E++ +Q + Y +I+ K L
Sbjct: 421 LRRLKKDVEKS----LPSKTERILRVELSDVQMEYYRNIITKNYAALNAGVKGSQISLLN 476
Query: 311 -LALSSRTANHQSLQNTA-----------------------SGKLVVLDLLLKKLYNSGH 346
++ + +NH L + A SGK+V+L+ LL +L GH
Sbjct: 477 VMSELKKASNHPYLFDGAEERVLAKGGSTSRDNVLKGLVMSSGKMVLLEQLLTRLKKEGH 536
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDIL D+L ++ Y ++RLDG + + +R +I HF+ + +
Sbjct: 537 RVLIFSQMVRILDILGDYLSIKGYQFQRLDGGVPSAQRKISIDHFNSPDSKD-------- 588
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ HV V+
Sbjct: 589 ---FVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKKHVSVYRFVS 645
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVE--TDDLRSII-FG 515
+ TVEE I+ RA +K+ L + ++ + D ++ E T +L I+ FG
Sbjct: 646 KDTVEEEILERARKKMILEYAIISLGMTDPNSSKKNKNEPNTSELSQILKFG 697
>gi|149244356|ref|XP_001526721.1| chromo domain protein 1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449115|gb|EDK43371.1| chromo domain protein 1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 1500
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 186/518 (35%), Positives = 270/518 (52%), Gaps = 72/518 (13%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q ++FLS+L FS+ GP L
Sbjct: 405 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIFSRRQYGPHL 464
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ PLS W K+ P + + Y+G E R+ IR YE P F+
Sbjct: 465 VVVPLSTIPAWQETFEKWAPDVNCVYYLGNGEARKTIRE--YEWYTTGGSGGGRKP-KFN 521
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
+LLTTY+ +L D+ L W + +DEA RLKN S LY L+ F +LL+TGTP+
Sbjct: 522 ILLTTYEYILKDRAELGSFKWQFLAVDEAHRLKNAESSLYESLKS-FKCANKLLITGTPL 580
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNN+ EL AL F MP F + + + IK+ L+ ++ F+L
Sbjct: 581 QNNMKELAALCDFLMPGKFSIEQEI------DFDTPDEDQELYIKD----LQKKINPFIL 630
Query: 271 RRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS---------- 314
RR K K VE LP T E++ +Q Y +I+ K L A +
Sbjct: 631 RRLK-KDVETS---LPGKTERILRVELSDIQTDYYKNIITKNYAALNAGNKGSQISLLNV 686
Query: 315 ----SRTANHQSLQNTA-----------------------SGKLVVLDLLLKKLYNSGHR 347
+ +NH L + A SGK+V+L+ LL +L GHR
Sbjct: 687 MSELKKASNHPYLFDGAEERVLSRAGSYSRENVLKGMVMSSGKMVLLEQLLTRLKKEGHR 746
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QM + LDIL D++ ++ Y+++RLDG I + +R +I HF+ A +
Sbjct: 747 VLIFSQMVRMLDILGDYMSIKGYAFQRLDGGIPSSQRRISIDHFN-----------APDS 795
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ N VL V++
Sbjct: 796 KDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNQVLVYRFVSK 855
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVE 505
TVEE I+ RA +K+ L + ++ + D K+ + E
Sbjct: 856 DTVEEQILERARKKMILEYAIISLGITDPSAKKNSKAE 893
>gi|302841324|ref|XP_002952207.1| hypothetical protein VOLCADRAFT_81789 [Volvox carteri f.
nagariensis]
gi|300262472|gb|EFJ46678.1| hypothetical protein VOLCADRAFT_81789 [Volvox carteri f.
nagariensis]
Length = 755
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 190/563 (33%), Positives = 287/563 (50%), Gaps = 82/563 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYL-KFSQMSPGPFLV 91
+TA+L+ +Q++G++WLI Y GVN +L DEMGLGKTLQ ISF+SYL ++ ++V
Sbjct: 159 ITADLRDYQLKGVAWLISLYKNGVNGILADEMGLGKTLQTISFISYLWGHAKDVSSNYMV 218
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS WV+E +F P + V Y G +R +IRR +Q V
Sbjct: 219 IGPLSTLSNWVAEFNRFCPSIPVQLYHGTPPERESIRRNQMSSTDKQ----------MPV 268
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
++T+Y++ + D+ L + W ++DE RLKN L LR RLL+TGTP+Q
Sbjct: 269 IVTSYEIAMADRCHLERHKWKLLVVDEGHRLKNFDCKLLRELR-RLKTDSRLLLTGTPLQ 327
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAP--KRGKIKEQFTSLKGILSAFM 269
NNL ELW+L+ FCMP++F +FL F ++ P ++ + L IL F+
Sbjct: 328 NNLRELWSLLSFCMPNIFADAGEFLDWFDFRTPETAIPAAQQQARATMVSRLHAILKPFV 387
Query: 270 LRRTKQKLVECGHLMLPPLTEITV-------------------------LQKKVYASILR 304
LRR K VE G +PP E+ + +Q++ +R
Sbjct: 388 LRRVKAD-VEIG---VPPKQEVVLYAEMTEEQRRLTRGLIDARTIHFVNVQEEYAKDGVR 443
Query: 305 KELPKLLALSSRTANHQSLQN----------------TASGKLVVLDLLLKKLYNSGHRV 348
L L+ + NH L GKL +LD LLK+L GHRV
Sbjct: 444 GSLNNLIMQMRKVCNHPDLITGRASGEICYPPAAELVAECGKLALLDRLLKELRKGGHRV 503
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QMT+ L++++ +L+ R+DGS+ ++R I F ++G +D
Sbjct: 504 LIFSQMTEMLNVIEAYLQDLGIQPLRIDGSVHWQQRRNDIAEF-----------QSGNSD 552
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
+VF++STRAGG+G+NL AADTVI Y+ DWNP D QA+ R HRIGQ VL LVT +
Sbjct: 553 KWVFLLSTRAGGLGINLTAADTVIIYDSDWNPHQDAQAMDRCHRIGQTKPVLVFRLVTSN 612
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEE 528
+VE ++ +AE K L V+ ++ ++ D+L + L +P +
Sbjct: 613 SVENRMLAKAESKKALERIVIKKGAFKELLQSTSSTSVDEL------VQLLNP----DRR 662
Query: 529 SDDLRLSGL--NSMVEKVIAMRH 549
S DL SG+ + M+ K++ H
Sbjct: 663 SQDLAQSGVVSDQMLRKLLDRSH 685
>gi|428161778|gb|EKX31046.1| hypothetical protein GUITHDRAFT_83481 [Guillardia theta CCMP2712]
Length = 948
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 192/516 (37%), Positives = 279/516 (54%), Gaps = 73/516 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+L+ +Q+EGL+WL+R Y G++ +L DEMGLGKT+Q ++ + YL + +PGP ++L
Sbjct: 39 NGQLREYQLEGLNWLVRLYNNGISGILADEMGLGKTVQTVAMIGYLTEFKDAPGPHMILA 98
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W+ E K+ P ++ G +E+R E+ +V P FDV++
Sbjct: 99 PKSTMSNWIKEFRKWLPDHRIVYVGGTKEER------------EEQLKKHVQPGEFDVVI 146
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T++++V ++ + W Y +IDEA R+KN +S+L V+RE RLL+TGTP+QNN
Sbjct: 147 TSFEIVCREKNHFKKFNWRYFVIDEAHRIKNENSLLSGVVRE-LKTHSRLLLTGTPLQNN 205
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P F + F + F+ + K +E L IL F+LRR
Sbjct: 206 LHELWALLNFLLPDEFADADDFDAFFESSE---------KAEEVTGKLHRILRPFLLRRL 256
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRK----------ELPKLLALS--- 314
K VE G LPP +E+ + +QKK+Y+SIL+K E +LL +
Sbjct: 257 KAD-VEKG---LPPKSEVNMYIPMSNMQKKLYSSILKKDVDAINGKGGERSRLLNIVMQL 312
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L S KL VLD LL K G RVL+F+QMT+ LD
Sbjct: 313 RKCCNHPYLFEGQEPGPPFVEGEHLIDNSAKLKVLDRLLDKAKAEGSRVLIFSQMTRMLD 372
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+DF R + Y R+DG I + R I F + D F+F++STRAG
Sbjct: 373 ILEDFCWYRGHKYCRIDGGISGDVREEMIESFMKDDS-----------DKFIFLLSTRAG 421
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+GLNL A+ VI ++ DWNPQVD QA+ RAHRIGQ VL + E++VEE ++ RA
Sbjct: 422 GLGLNLQKANWVILFDSDWNPQVDIQAMDRAHRIGQTKPVLVYRFIVENSVEEKVLERAF 481
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFG 515
+KL L VV + K ++A + + L I FG
Sbjct: 482 KKLFLDAMVVQQGRLTD--KHKSASKDELLEMIRFG 515
>gi|414592147|tpg|DAA42718.1| TPA: chromatin complex subunit A101 [Zea mays]
Length = 779
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 178/523 (34%), Positives = 285/523 (54%), Gaps = 72/523 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q++G+ WLI + G+N +L D+MGLGKT+Q I FL++LK M GP+L++ P
Sbjct: 214 GKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGMH-GPYLIIAP 272
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS WV+E+++FTP L + Y G + R IRR +NV P F +++T
Sbjct: 273 LSTLSNWVNEISRFTPSLVSIIYHGGKAARAEIRRKFMP--------TNVGP-DFPIVVT 323
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + D FL+ W Y ++DE RLKN +L L+ M +LL+TGTP+QNNL
Sbjct: 324 SYEMAMFDAKFLAAYKWKYVVVDEGHRLKNAKCLLLKQLK-RIPMDNKLLLTGTPLQNNL 382
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
+ELW+L++F +P +F + +F S F + + ++ ++ + L IL F+LRR K
Sbjct: 383 AELWSLLNFILPDIFSSHQEFESWFDFSGGNEETDEKKRL-HVVSKLHAILRPFLLRRMK 441
Query: 275 QKLVECGHLMLPPLTEITV--------------LQKKVYASILRKE-------------L 307
+ + + MLP EI + L +K + + L +E L
Sbjct: 442 EDVEQ----MLPRKKEIIIYANMTEQQKQIQHHLIEKTFDNYLHEESDIILKRPGIRARL 497
Query: 308 PKLLALSSRTANHQSLQNTA----------------SGKLVVLDLLLKKLYNSGHRVLLF 351
L+ + NH L + GK + D LL L H+VL+F
Sbjct: 498 HNLMIQLRKNCNHPDLLESPVDSTGLYPPVEKLLEQCGKFQLFDRLLNFLMAQKHKVLVF 557
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFS-VQSAIERLYSEAGGNDAF 410
+Q T+ LDI++ +L+ + ++ R+DG+++ EER I F+ V S++
Sbjct: 558 SQWTKVLDIIEYYLDSKGHAVCRIDGNVKLEERRRQIAEFNDVNSSMR------------ 605
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+F++STRAGG+G+NL AADT I Y+ DWNPQ+D QA+ R HRIGQ V L T H+V
Sbjct: 606 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATSHSV 665
Query: 471 EEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
E +M+RA KL+L H V+G +++ + +A++ +L +++
Sbjct: 666 EGRMMKRAFGKLKLEHVVIGKGQFEQDRAKPSALDEGELLALL 708
>gi|212530546|ref|XP_002145430.1| RSC complex subunit (Sth1), putative [Talaromyces marneffei ATCC
18224]
gi|210074828|gb|EEA28915.1| RSC complex subunit (Sth1), putative [Talaromyces marneffei ATCC
18224]
Length = 1430
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 182/502 (36%), Positives = 265/502 (52%), Gaps = 74/502 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W+I Y +N +L DEMGLGKT+Q IS ++YL + + GPFLV+
Sbjct: 548 VGGTLKEYQLKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEVKKNSGPFLVI 607
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTM-YEHVKEQSQMSNVSPLPFDV 151
PLS W E K+ P + + Y G R+ ++T+ Y F V
Sbjct: 608 VPLSTLTNWHLEFDKWAPSVTKVVYKGPPAVRKQQQQTIRYGQ--------------FQV 653
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
LLTTY+ ++ D+ LS+I W + I+DE R+KN S L + L +++ RL++TGTP+Q
Sbjct: 654 LLTTYEYIIKDRPLLSKIKWQHMIVDEGHRMKNAQSKLSSTLTQYYNTRYRLILTGTPLQ 713
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILS 266
NNL ELWAL++F +PS+F ++ F F ++ R + E+ L +L
Sbjct: 714 NNLPELWALLNFVLPSIFKSVKSFDEWFNTPFANTGNQDRIDLTEEEQLLVIRRLHKVLR 773
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILR---------------- 304
F+LRR K+ + + LP E + LQ K+Y +L
Sbjct: 774 PFLLRRLKKDVEKD----LPDKQERVIKCRSSALQAKLYKQLLTHNKMVVSDGKGGKIGM 829
Query: 305 KELPKLLALSSRTANH-----------------QSLQNTASGKLVVLDLLLKKLYNSGHR 347
+ L +L + NH L +GK +LD +L K +GHR
Sbjct: 830 RGLSNMLMQMRKLCNHPFVFEPVEDQMNPGRGTNDLIWRTAGKFELLDRVLPKFKATGHR 889
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF QMTQ ++I++DFL R Y RLDGS ++++R ++ F+ A +
Sbjct: 890 VLLFFQMTQIMNIMEDFLRFRGLKYLRLDGSTKSDDRSELLKLFN-----------APNS 938
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
D F F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V + L+T
Sbjct: 939 DYFCFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITS 998
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
++VEE I+ RA+ KL + V+
Sbjct: 999 NSVEEKILGRAQFKLDMDGKVI 1020
>gi|66800671|ref|XP_629261.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
gi|60462656|gb|EAL60858.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
Length = 3071
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 269/507 (53%), Gaps = 83/507 (16%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F LK QVEG WL + + LL DEMGLGKT+Q+I+FL YL S GPF
Sbjct: 891 KFQDNLSLKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQSIAFLQYLSQSVGIKGPF 950
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
LV+ PLS W E+ K+T K++ L + G +E R I + ++H F
Sbjct: 951 LVVAPLSTLGNWHKEILKWT-KMKTLVFYGSQETRGFISKYEFKHK---------DTYLF 1000
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+VLLTTY+ ++ D ++PW I+DE R+KN S + + L+ +++TGTP
Sbjct: 1001 EVLLTTYETIMSDHSSFVRVPWRALILDEGHRIKNDKSKVLSKLKS-IKTEHSIILTGTP 1059
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QN++ ELW +++F P F + +FL + D S Q + L +LS ++
Sbjct: 1060 LQNDMKELWTMLNFLDPDKFNSCQEFLDEYSDLKEES----------QVSKLHQLLSPYL 1109
Query: 270 LRRTKQKLVECGHLMLPPLTEITVLQ-------KKVYASILRKE-------------LPK 309
LRR K+ + L +P + E TV+Q K Y +IL + LPK
Sbjct: 1110 LRRMKEDV----ELSIP-IKEETVIQVELSSTQKTYYRAILERNREFLSRGIKQKTNLPK 1164
Query: 310 LLALS---SRTANHQSLQNTA-----------------------SGKLVVLDLLLKKLYN 343
L + + NH L A S KLV++D LL++L
Sbjct: 1165 LSNIMIQIRKVCNHPFLIPGAEESIVKQEKIAGDEELGELLVKSSSKLVLVDKLLQRLKA 1224
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
GH+VL+F+QM ++L+IL+D+L+ R+Y+YERLDGSI++E R A+I F +
Sbjct: 1225 EGHQVLIFSQMVESLNILEDYLQYREYTYERLDGSIKSEVRQASIDRF-----------Q 1273
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
G + FVF++STRAGGVG+NL ADTVI ++ DWNPQ D QA R HRIGQ N+V
Sbjct: 1274 DKGANRFVFLLSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYR 1333
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVVG 490
L+T +T EE + A +KL L H V+
Sbjct: 1334 LITRNTYEEYLFECATKKLLLDHIVLS 1360
>gi|440637835|gb|ELR07754.1| hypothetical protein GMDG_00377 [Geomyces destructans 20631-21]
Length = 1536
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 185/507 (36%), Positives = 266/507 (52%), Gaps = 75/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ Q+ GL++L + NV+L DEMGLGKT+Q +SF+S+L+ + GPFLV+ P
Sbjct: 459 GQLRDFQITGLNFLAYNWSKNKNVILADEMGLGKTVQTVSFMSWLRHDRNQNGPFLVIVP 518
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W + P + Y G+ R IR E +V F+VLLT
Sbjct: 519 LSTMPAWGDTFDFWAPDTNYVVYNGKESSRSIIRDC------ELLSGGDVRKPKFNVLLT 572
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y+ +L D FL QI W + +DEA RLKN S LY L + F P RLL+TGTP+QN L
Sbjct: 573 SYEYILADANFLGQIKWQFMAVDEAHRLKNRESQLYQRLLD-FKTPSRLLITGTPVQNTL 631
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL ALM F MP + T + A E+ +L + ++LRRTK
Sbjct: 632 GELSALMDFLMPGEVDIEDDMDLTSEAA------------GEKIAALTTKIQPYILRRTK 679
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASIL--------------RKELPKLLALS 314
QK+ LPP T E++ +Q + Y +IL ++ L ++
Sbjct: 680 QKVEND----LPPKTEKIIRVELSDVQLEYYKNILTRNYAALNEGSKGQKQSLLNIMMEL 735
Query: 315 SRTANHQSLQNTA---------------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ +NH + A SGK+++LD LL KL HRVL+F+Q
Sbjct: 736 KKASNHPYMFPNAEDKILKGGDRREDMLKGLIASSGKMMLLDRLLTKLKKDNHRVLIFSQ 795
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
M + LDIL D+L+LR ++++RLDG++ + R AI HF+ + + F F+
Sbjct: 796 MVKMLDILGDYLQLRGHAFQRLDGTMASGPRRLAIDHFNADDSQD-----------FCFL 844
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ V L+++ TVEE
Sbjct: 845 LSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKRPVSVYRLLSKETVEEE 904
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKE 500
I+ RA KL L + V D+E+ +
Sbjct: 905 ILERARNKLMLEFITIQRGVTDKEMNQ 931
>gi|330793226|ref|XP_003284686.1| hypothetical protein DICPUDRAFT_53111 [Dictyostelium purpureum]
gi|325085384|gb|EGC38792.1| hypothetical protein DICPUDRAFT_53111 [Dictyostelium purpureum]
Length = 2666
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 183/500 (36%), Positives = 266/500 (53%), Gaps = 82/500 (16%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK QVEG WL + G + LL DEMGLGKT+Q I+F+ YL GPFL++ PLS
Sbjct: 670 LKDFQVEGFLWLTYCWYQGRSSLLADEMGLGKTIQTIAFIQYLSQKVGIKGPFLIVAPLS 729
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E K+T ++ L Y G +E R I + ++ K+ F+VLLTTY
Sbjct: 730 TLGNWHKEFLKWT-DMKTLVYYGSQETRSFISKYEFKAGKDN--------YLFEVLLTTY 780
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ ++ D ++PW ++DE R+KN S + + L+ +++TGTP+QN++ E
Sbjct: 781 ETIMSDHSVFVRVPWRALVLDEGHRIKNEKSKVLSKLK-SIKTEHSVILTGTPLQNDMKE 839
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LW +++F P F N FL+ + D S Q + L +L+ ++LRR K+
Sbjct: 840 LWTMLNFLDPEKFDNCNDFLNEYSDLKEES----------QVSKLHQLLTPYLLRRMKEN 889
Query: 277 LVECGHLMLPPLTEITVL-------QKKVYASIL-------------RKELPKLLALS-- 314
+ L + P+ E TV+ QK Y +IL + LPKL +
Sbjct: 890 V----ELSI-PIKEETVIQVELSSTQKTYYRAILERNREFLARGIRHKSNLPKLSNIMIQ 944
Query: 315 -SRTANHQSL----------QNTASG-------------KLVVLDLLLKKLYNSGHRVLL 350
+ NH L Q SG KLV++D LL++L GH+VL+
Sbjct: 945 IRKVCNHPFLIPGAEESIVKQEKISGEDELGELLVRSSSKLVLVDKLLQRLKAEGHQVLI 1004
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM ++L+IL+D+L+ R+Y+YERLDGSI++E R A+I F + A + F
Sbjct: 1005 FSQMVESLNILEDYLQYREYTYERLDGSIKSEVRQASIDRFQDKEA-----------NRF 1053
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF++STRAGGVG+NL ADTVI ++ DWNPQ D QA R HRIGQ N+V L+T +T
Sbjct: 1054 VFLLSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNTY 1113
Query: 471 EEVIMRRAERKLRLSHNVVG 490
EE + A +KL L H V+
Sbjct: 1114 EEYLFECATKKLLLDHIVLS 1133
>gi|91081375|ref|XP_972116.1| PREDICTED: similar to helicase [Tribolium castaneum]
gi|270005181|gb|EFA01629.1| hypothetical protein TcasGA2_TC007199 [Tribolium castaneum]
Length = 1011
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 178/490 (36%), Positives = 270/490 (55%), Gaps = 62/490 (12%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F E++ +Q+ GL+W++ Y G+N +L DEMGLGKTLQ IS L ++K + +P P +
Sbjct: 118 FIKNGEMRDYQIRGLNWMVSLYENGINGILADEMGLGKTLQTISLLGFMKHYKNTPSPHI 177
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ P S W++E K+ P + + +G++E R R + + P +D
Sbjct: 178 VIVPKSTLANWMNEFKKWCPSIRAVCLIGDQEARNAFIRDV------------MMPGDWD 225
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
V +T+Y++V+ ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+
Sbjct: 226 VCVTSYEMVIKEKSVFKKFNWRYMVIDEAHRIKNEKSKLSEILRE-FKTTNRLLLTGTPL 284
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL ELWAL++F +P VF + + F + F +++ ++ E+ L +L F+L
Sbjct: 285 QNNLHELWALLNFLLPDVFNSADDFDAWF----NTNQCLGDNQLVER---LHAVLKPFLL 337
Query: 271 RRTKQKLVECGHLMLPPLTEITV--LQKKVYASILRKE--------------LPKLLALS 314
RR K ++ + + + +Q++ Y +L K+ L +L
Sbjct: 338 RRLKSEVEKKLKPKKELKVYVGLSKMQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQL 397
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ +NH L + A GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 398 RKCSNHPYLFDGAEPGPPYTTDEHLVYNCGKMVLLDKLLPKLKEQDSRVLIFSQMTRMLD 457
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R+Y+Y RLDG E+R I ++ ++ F+FM+STRAG
Sbjct: 458 ILEDYCHWRQYNYCRLDGQTPHEDRQRQINEYNEPNS-----------SKFIFMLSTRAG 506
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE+TVEE I+ RAE
Sbjct: 507 GLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAE 566
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 567 VKLRLDKLVI 576
>gi|412985746|emb|CCO16946.1| SNF2 family helicase/ATPase PasG [Bathycoccus prasinos]
Length = 795
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 185/506 (36%), Positives = 275/506 (54%), Gaps = 78/506 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+A L+ +Q+ G+ WLI + G+N +L D+MGLGKT+Q I FLS+L+ S+ GPFLV+
Sbjct: 226 SAVLRGYQLRGVKWLISLWSNGLNGILADQMGLGKTIQTIGFLSHLR-SKGICGPFLVVG 284
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
PLS W++E KF P + Y G +++R NIR T + + +V F V++
Sbjct: 285 PLSTLSNWINEFKKFCPAFPTVLYHGSKQERANIRNT-------RMPVRSVVDETFPVIV 337
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP--RRLLMTGTPIQ 211
T++++ + D+ FL + + Y I+DE RLKN L +RE ++P +LL+TGTP+Q
Sbjct: 338 TSFEIAMFDRKFLQKYQFKYLIVDEGHRLKNFDCKL---IRELKIIPAANKLLLTGTPLQ 394
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFK------DAVHSSSAPKRGKIKEQFTSLKGIL 265
NNL ELW+L+HF +P VF +L+QF S F D V + ++ + K + L GIL
Sbjct: 395 NNLPELWSLLHFLLPDVFSSLDQFKSWFDFSEELDDKVEFAEREQQRRAK-VISKLHGIL 453
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITVL------QKKVYASILRKELPKLL-------- 311
F+LRR K + + LP EI V QKK +++ K + +L
Sbjct: 454 KPFLLRRLKGDV----EISLPRKKEIIVYASMTETQKKFNDAMVDKTIEDMLKKEAGGNR 509
Query: 312 ------ALSS------RTANHQSLQNTA----------------SGKLVVLDLLLKKLYN 343
AL++ + NH L + GK+ +LD LL L
Sbjct: 510 VPVGSTALNNMLMQLRKNCNHPDLISGGLDGSIMFPSAEELVAQCGKMQLLDRLLTSLRK 569
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
SGH+ L+F+QMT+ LD+L+ F E R R+DGS++ E+R AI F+ ++
Sbjct: 570 SGHKTLIFSQMTRMLDLLESFFEQRGERVCRIDGSVKQEQRRDAIDAFNKDPTVD----- 624
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
+F++STRAGG+G+NL AADTVI Y+ DWNP D QA+ R HRIGQ V
Sbjct: 625 -------IFLLSTRAGGLGINLTAADTVIIYDSDWNPHADMQAMDRVHRIGQTKPVHVYR 677
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVV 489
L T ++VE ++ RA KL+L V+
Sbjct: 678 LATANSVEGKMLSRAASKLKLEKLVI 703
>gi|340052319|emb|CCC46595.1| putative transcription activator [Trypanosoma vivax Y486]
Length = 1129
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 182/498 (36%), Positives = 264/498 (53%), Gaps = 76/498 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q+EG++WL+ + +N +L DEMGLGKTLQ IS L+YLKFS PGP LV+
Sbjct: 172 IRGKLRPYQIEGVNWLLGLFSRCINGILADEMGLGKTLQTISTLAYLKFSHGLPGPHLVV 231
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRN-IRRTMYEHVKEQSQMSNVSPLPFDV 151
CP SV W E+ + P L ++ G + RR I+ + H K + +D+
Sbjct: 232 CPKSVMGNWYREIRHWCPALRAYKFHGSNDVRRQLIKAHLNPHEK----------IKYDI 281
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR--RLLMTGTP 209
++TT+++V+ + L IPW Y I+DEA +LKN S + VL +P RL++TGTP
Sbjct: 282 VVTTFEMVIEECTSLKNIPWQYLIVDEAHKLKNEESRSHTVLHS---IPSNYRLIITGTP 338
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL ELWAL+HF P +F F + F A + + ++ +L M
Sbjct: 339 LQNNLKELWALLHFLAPRLFDNSESFQAWFDTASGQQDS-------DALNNMHKVLVPLM 391
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPK 309
+RR K V G +PP EI V Q++ Y +L K+ L
Sbjct: 392 IRRMKAD-VSTG---IPPKKEIYVSCKLTKTQRRWYMHVLAKDAEALNKGSRGQMSVLSN 447
Query: 310 LLALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLY---NSGHRVLLF 351
+L + NH + + SGK+++LD LL +L+ H+VL+F
Sbjct: 448 VLMNLRKVINHPYMMDGGEDGPPFITDERIVKYSGKMLILDKLLNRLFRDEKEKHKVLIF 507
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+Q T LDIL D+ +R Y R+DG+ +R + + F+ + D F+
Sbjct: 508 SQFTSMLDILDDYCAMRGYHTCRIDGNTSGYDRDSQMALFN-----------SPNGDCFI 556
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+G+NL AA+ VI Y+ DWNPQ+D QA RAHRIGQ V VT+ TVE
Sbjct: 557 FLLSTRAGGLGINLQAANHVIIYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFVTDGTVE 616
Query: 472 EVIMRRAERKLRLSHNVV 489
E I RRA +KL L VV
Sbjct: 617 EKIYRRALKKLYLDAMVV 634
>gi|115462049|ref|NP_001054624.1| Os05g0144300 [Oryza sativa Japonica Group]
gi|53749343|gb|AAU90202.1| putative transcriptional regulator [Oryza sativa Japonica Group]
gi|113578175|dbj|BAF16538.1| Os05g0144300 [Oryza sativa Japonica Group]
Length = 1128
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 185/513 (36%), Positives = 277/513 (53%), Gaps = 75/513 (14%)
Query: 14 IHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAI 73
+H +E+ + P A E G EL+P+Q+EGL W++ + +N +L DEMGLGKT+Q I
Sbjct: 422 VHSIEEKVTEQP-SALEGG---ELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTI 477
Query: 74 SFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE 133
+ ++YL + GP L++ P +V W +E + P + + Y G + R+ +R
Sbjct: 478 ALIAYLLEKKEVTGPHLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPDDRKALRE---- 533
Query: 134 HVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
N F+VLLT YD++L D FL ++ W Y I+DE RLKN L L
Sbjct: 534 --------KNFGQRQFNVLLTHYDLILKDLKFLKKVHWHYLIVDEGHRLKNHECALARTL 585
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGK 253
+ + RRLL+TGTPIQN+L ELW+L++F +P++F + F F +AP +
Sbjct: 586 VSRYQIRRRLLLTGTPIQNSLQELWSLLNFILPNIFNSSQNFEEWF-------NAPFACE 638
Query: 254 I----KEQFT---SLKGILSAFMLRRTKQKLVECGHLMLPPLTEI------TVLQKKVYA 300
+ +EQ L +L F+LRR K ++ + LP T++ + QK Y
Sbjct: 639 VSLNDEEQLLIIHRLHQVLRPFLLRRKKDEVEK----YLPVKTQVILKCDMSAWQKAYYE 694
Query: 301 SIL------------RKELPKLLALSSRTANHQSL----------QNT--ASGKLVVLDL 336
+ K L L + NH L Q +SGK +LD
Sbjct: 695 QVTSNGRVSLGSGLKSKALQNLSMQLRKCCNHPYLFVEHYNMYQRQEIVRSSGKFELLDR 754
Query: 337 LLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSA 396
LL KL +GHRVLLF+QMT+ LDIL+ +L++ ++ Y RLDGS + EER + F+ + +
Sbjct: 755 LLPKLQRAGHRVLLFSQMTKLLDILEVYLQMYQFKYMRLDGSTKTEERGRLLADFNKKDS 814
Query: 397 IERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQM 456
+ F+F++STRAGG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ
Sbjct: 815 -----------EYFLFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQK 863
Query: 457 NHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
N V LV+ ++EE I+ RA++K+ + V+
Sbjct: 864 NEVRVFVLVSVGSIEEEILDRAKQKMGIDAKVI 896
>gi|209882890|ref|XP_002142880.1| SNF2 family helicase [Cryptosporidium muris RN66]
gi|209558486|gb|EEA08531.1| SNF2 family helicase, putative [Cryptosporidium muris RN66]
Length = 1313
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 177/494 (35%), Positives = 271/494 (54%), Gaps = 65/494 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V EL P+Q+ G+ W++ Y ++ +L DEMGLGKT+Q I+ L+YL + + GP L++
Sbjct: 490 VGGELLPYQIVGVEWMLSLYNNNLHGILADEMGLGKTIQTIALLTYLYEHKNNYGPHLIV 549
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W+ E ++P L++L + G R +R+N+ R + + F++
Sbjct: 550 VPLSTLPNWLKEFNIWSPSLKLLCFKGNRYERKNLIREL-------------RLMKFNIC 596
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTT+D V+ ++ L I W + I+DE RLKN S + VL + F R+L+TGTP+QN
Sbjct: 597 LTTFDFVIREKNILQTISWKHVIVDEGHRLKNSKSKFHIVLHD-FQSKNRILLTGTPLQN 655
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHS-SSAPKRGKIKEQ-----FTSLKGILS 266
N++ELW+L++F +P VF ++ F + F SS+ + ++ E+ L IL
Sbjct: 656 NINELWSLLNFLLPKVFHSVEDFENWFNRPFSELSSSENQIELTEEEKLFIINRLHSILR 715
Query: 267 AFMLRRTK----QKLVECGHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRTANHQS 322
F+LRR K Q L E ++ E+T Q+ VY I +K + + +SS ++S
Sbjct: 716 PFLLRRVKSDVLQDLPEKREYIIR--MELTPWQRVVYGQIKQKAVHSM-DISSGKIQYRS 772
Query: 323 LQNT---------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ NT S K +LD ++ KL H+VL+F QMT
Sbjct: 773 VSNTIMQLRKIVNHPYLFVDEYFARNDDIFKVSCKFEILDRMIPKLVYFKHKVLIFCQMT 832
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
Q +DIL DFL+ R SY RLDG++ +ER + F+ ++ FVFM+S
Sbjct: 833 QLMDILGDFLDYRDISYYRLDGTMNIQERKEKMDIFN-----------DPDSNTFVFMLS 881
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+GLNL AADTVI ++ DWNP D QA RAHR+GQ N V LV+ VEE+++
Sbjct: 882 TRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQSRAHRMGQKNEVRVFRLVSISGVEELVL 941
Query: 476 RRAERKLRLSHNVV 489
+RA++KL + ++
Sbjct: 942 KRAQKKLDIDQKII 955
>gi|291001481|ref|XP_002683307.1| chromodomain helicase DNA binding protein [Naegleria gruberi]
gi|284096936|gb|EFC50563.1| chromodomain helicase DNA binding protein [Naegleria gruberi]
Length = 1800
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 176/507 (34%), Positives = 274/507 (54%), Gaps = 69/507 (13%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ F +L+ +Q+EGL+WL+ + N +L DEMGLGKT+Q ++ L YL+ +
Sbjct: 345 ESPSFRDGNQLREYQLEGLNWLVFCWYQRRNSILADEMGLGKTVQTVATLEYLRAFEHIR 404
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRT--MYEHVKEQSQMSNV 144
GPF+V+ PLS + W E +T + VL + G + R ++ ++H K + + +
Sbjct: 405 GPFIVIAPLSTVEHWKREFENWT-DMNVLVFHGNTQSREVMKNHEFFFKHPKTGNLIYHQ 463
Query: 145 SPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLL 204
F+VL+TTY++V+ + +LS+IPW Y ++DE RLKN +S L +L+ +F +LL
Sbjct: 464 KTYKFNVLITTYEIVMAESSYLSKIPWQYLVVDEGHRLKNHNSKLAQILK-NFNAVHKLL 522
Query: 205 MTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGI 264
+TGTPIQNNL+EL++L+ F P F L+ F + + S S E+ L +
Sbjct: 523 LTGTPIQNNLTELFSLLQFLDPETFYDLDVFSEEYGNLGESGS--------EKLEGLHKL 574
Query: 265 LSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTA 318
+S ++LRR K+ + + +PP EI V +QK +I ++ L+ S++
Sbjct: 575 ISPYILRRLKEDVEKS----IPPKEEIVVEVVPTSIQKAYEQAIFKRNREFLMKGVSKSQ 630
Query: 319 NHQSLQNT------------------------------------ASGKLVVLDLLLKKLY 342
N L N +S K++++D LL+KL
Sbjct: 631 NVPKLNNVLMELRKVCNHPFLISGAEENITRGMSDVEVNEALIKSSSKMILVDKLLRKLR 690
Query: 343 NSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYS 402
GH+VL+F+QM L+IL+D++ R ++Y RLDG+I+ R AI F+ +
Sbjct: 691 EGGHKVLIFSQMVLVLNILEDYMRYRNFTYVRLDGTIKGSIRQQAIDRFNDPNI------ 744
Query: 403 EAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSI 462
D FVF++ST+AGGVG+NL +ADTVI Y+ DWNPQ D QA R HRIGQ V
Sbjct: 745 -----DTFVFLVSTKAGGVGINLTSADTVIIYDSDWNPQNDLQAQARCHRIGQTKEVKIY 799
Query: 463 NLVTEHTVEEVIMRRAERKLRLSHNVV 489
L+T++T E+ I RA KL L V+
Sbjct: 800 RLLTKNTKEKEIFERASMKLGLDRAVL 826
>gi|401827829|ref|XP_003888207.1| SNF2-like helicase [Encephalitozoon hellem ATCC 50504]
gi|392999407|gb|AFM99226.1| SNF2-like helicase [Encephalitozoon hellem ATCC 50504]
Length = 823
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 180/503 (35%), Positives = 270/503 (53%), Gaps = 71/503 (14%)
Query: 16 DNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISF 75
D++ + T V + F V ELK +Q+EGL+WLI + +N +L DEMGLGKTLQ I+F
Sbjct: 33 DDEPIEPYTFVSSPRF-VLHELKDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAF 91
Query: 76 LSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV 135
L Y+++ + L++ P S W E KF P +V + R++ R
Sbjct: 92 LGYIRYVKKERKKHLIVLPKSTLANWKREFKKFMPNYKVRVFYSSRKEMR---------- 141
Query: 136 KEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE 195
+ + +D LTTY++ + + L+ + W Y IIDEA R+KN S+L ++R
Sbjct: 142 ---KEAEEIMSSKWDACLTTYEMCINAKNILNTVDWSYIIIDEAHRIKNEHSLLSKIVR- 197
Query: 196 HFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIK 255
F RLL+TGTP+QNN+ ELWAL++F +P +F +F +
Sbjct: 198 IFSCDHRLLITGTPLQNNVHELWALLNFIVPEIFNDAEKFEKYVMNIDEGDG-------- 249
Query: 256 EQFTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKEL-- 307
E ++ +L F LRR K VE G LPP ++++ +Q++ Y +L+++L
Sbjct: 250 EAIKRIRSVLQLFFLRREKVD-VEEG---LPPKKVINLYSKLSPMQREWYRMLLKRDLSP 305
Query: 308 ------PKLLALS-----SRTANHQSLQNTA--------------SGKLVVLDLLLKKLY 342
PK + ++ + NH L A SGK+V+LD LL L
Sbjct: 306 LGSTRDPKGMLMNVVMQLRKCCNHPYLFPDAEPEPYTNDKHIIENSGKMVMLDKLLANLK 365
Query: 343 NSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYS 402
G RVL+F+QM+ LDIL+D+ + Y Y R+DGS +R AI F+
Sbjct: 366 AKGSRVLIFSQMSMMLDILEDYAMFKGYEYCRIDGSTSYRDRTEAIDTFN---------- 415
Query: 403 EAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSI 462
A G+D F+F+++TRAGG+G+NL ADTVI ++ DWNPQ+D QA RAHRIGQ V+
Sbjct: 416 -AEGSDKFIFLLTTRAGGLGINLSTADTVILFDSDWNPQMDLQAQDRAHRIGQKKQVMVF 474
Query: 463 NLVTEHTVEEVIMRRAERKLRLS 485
L++E+TVEE I+ R+ +KL+L
Sbjct: 475 RLISENTVEERIVYRSLQKLKLD 497
>gi|297802844|ref|XP_002869306.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp.
lyrata]
gi|297315142|gb|EFH45565.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 196/589 (33%), Positives = 301/589 (51%), Gaps = 93/589 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+T L +Q+EGL++L + G NV+L DEMGLGKT+Q+I+FL+ L +S P LV+
Sbjct: 219 LTGTLHTYQLEGLTFLKHSWSKGTNVILADEMGLGKTIQSIAFLASLFEENLS--PHLVV 276
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E A + P + V+ Y G E R ++EH + + FDVL
Sbjct: 277 APLSTLRNWEREFATWAPHMNVVMYTGTSE----ARDVIWEH---EFYFPKGRKIKFDVL 329
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LT+Y+++ D L I W I+DE RLKN S LY+ L + F R+L+TGTP+QN
Sbjct: 330 LTSYEMINQDTSVLKPIKWTCMIVDEGHRLKNKDSKLYSSLNQ-FTSKHRVLLTGTPLQN 388
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL EL+ LMHF F ++ F FKD ++Q + L +L+ +LRR
Sbjct: 389 NLDELFVLMHFLDAVKFASMENFQKEFKDINQ----------EKQISRLHQMLAPHLLRR 438
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRK-----------ELPKLLALSS 315
K+ +++ +PP E+ + QK+VY +++ ++ +L
Sbjct: 439 LKKDVLKDK---MPPKKELILRVDLSSQQKEVYKAVITNNYQVLTKKRGAKISNVLMDLR 495
Query: 316 RTANHQSLQNT-----------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ +H L ASGKL +LD ++ KL GHRVL+++Q TL
Sbjct: 496 KVCSHPYLLKDVEPRLEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYSQFQHTL 555
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
D+ QD+ + + YER+DG + ER A+I F+ +++ + F F+++TRA
Sbjct: 556 DLFQDYCSFKSWKYERIDGKVGGAERQASIDRFNAENS-----------NRFCFLLTTRA 604
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ N V+ L+ TVEE ++
Sbjct: 605 GGIGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLIHRATVEERMVEIT 664
Query: 479 ERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEESDDLRLSGL- 537
++K+ L H VVG+ E + D L II + K + +EE+D+ SG
Sbjct: 665 KKKMLLEHLVVGN-------MENPHLRQDVLDDII----KYGSKELFSEENDEAGKSGKI 713
Query: 538 ---NSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASAT 583
++ +EK++ H + V+L +E D ++F AT
Sbjct: 714 HYDDAAIEKLLDRDH----------VDAKEVSLDDEEDNGFLKNFKVAT 752
>gi|224099763|ref|XP_002311608.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222851428|gb|EEE88975.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1131
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 182/496 (36%), Positives = 279/496 (56%), Gaps = 75/496 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+P+Q+EGL W++ + +N +L DEMGLGKT+Q IS ++YLK ++ GP L++ P
Sbjct: 415 GQLRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLKETKGICGPHLIVAP 474
Query: 95 LSVTDGWVSEMAKFTPKLEV--LRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
+V WV+E + + + E+ Y G E+R+ IR + S+ N+ VL
Sbjct: 475 KAVLPNWVNEFSTWIEENEIKAFLYDGRLEERKAIREQL-------SREGNLQ-----VL 522
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T YD+++ D+ FL +I W Y I+DE RLKN L + + + RRLL+TGTPIQN
Sbjct: 523 ITHYDLIMRDKAFLKKIHWQYMIVDEGHRLKNHECALAKTI-AGYQLKRRLLLTGTPIQN 581
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAP--KRGKI----KEQF---TSLKG 263
+L ELW+L++F +P +F + ++F F +AP RG++ +EQ L
Sbjct: 582 SLQELWSLLNFLLPHIFNSEDKFEEWF-------NAPFADRGEVSLTDEEQLLIIRRLHN 634
Query: 264 ILSAFMLRRTKQKLVEC--GHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRTANHQ 321
++ F+LRR K ++ + G + +++ QK Y + E+ ++ L + + +
Sbjct: 635 VIRPFILRRKKDEVEKYLPGKSQVILKCDLSAWQKVYYQQVT--EMGRV-GLQNGSGKSK 691
Query: 322 SLQN----------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
SLQN ASGK +LD LL KL+ + HRVLLF+Q
Sbjct: 692 SLQNLTMQLRKCCNHPYLFVGDYNMWRKDEIMRASGKFELLDRLLPKLHATDHRVLLFSQ 751
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MT+ +DIL+ +L+L Y Y RLDGS + EER ++ F+ A + F+F+
Sbjct: 752 MTRLMDILEIYLQLHDYKYLRLDGSTKTEERGTLLKKFN-----------APDSPYFMFL 800
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ V LV+ +VEEV
Sbjct: 801 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEV 860
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA++K + V+
Sbjct: 861 ILERAKQKKGIDAKVI 876
>gi|403412939|emb|CCL99639.1| predicted protein [Fibroporia radiculosa]
Length = 1490
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 267/502 (53%), Gaps = 73/502 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS +++L S+ GP+LV+
Sbjct: 612 VGGTLKDYQIKGLQWMVSLYNNKLNGILADEMGLGKTIQTISLITFLIESKKQRGPYLVI 671
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E AK+ P ++++ Y G QR+ ++ S++ F VL
Sbjct: 672 VPLSTMTNWSGEFAKWAPGVKMISYKGNPTQRKVLQ-------------SDIRQGNFQVL 718
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ L+++ W + IIDE R+KN S L L +H+ RL++TGTP+QN
Sbjct: 719 LTTYEYIIKDRPHLARLRWVHMIIDEGHRMKNTQSKLAQTLTQHYHSRYRLILTGTPLQN 778
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELWAL++F +P +F ++ F F +S + ++ E+ L +L
Sbjct: 779 NLPELWALLNFVLPKIFNSVKSFDEWFNTPFANSGTGDKIELNEEEALLIIRRLHKVLRP 838
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASI------------------- 302
F+LRR K K VE LP E ++ LQ ++Y +
Sbjct: 839 FLLRRLK-KDVES---ELPDKVEKVIKIRMSALQSQLYKQMKKYKMIADGKDSKGKSGGV 894
Query: 303 --LRKELPKLLALSSRTANHQSLQNT-------------ASGKLVVLDLLLKKLYNSGHR 347
L EL +L + +S+++ +SGK+ +L +L K + + HR
Sbjct: 895 KGLSNELMQLRKICQHPFLFESVEDKINPAGIIDDKIIRSSGKIELLSRILPKFFATDHR 954
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F QMT+ +DI++DFL++ + Y RLDG + E+R + F+ A +
Sbjct: 955 VLIFFQMTKVMDIMEDFLKMMGWKYLRLDGGTKTEDRAGHVAQFN-----------APNS 1003
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
D VF++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ V + +TE
Sbjct: 1004 DIRVFILSTRAGGLGLNLQTADTVIIFDSDWNPHADLQAQDRAHRIGQTKVVRILRFITE 1063
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
+VEE + RA KL + V+
Sbjct: 1064 KSVEEAMFARARYKLDIDDKVI 1085
>gi|268573820|ref|XP_002641887.1| C. briggsae CBR-ISW-1 protein [Caenorhabditis briggsae]
Length = 1012
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 191/518 (36%), Positives = 270/518 (52%), Gaps = 75/518 (14%)
Query: 12 KIIHDNDERDGQTPVDAAEFGV-TAELKPHQVEGLSWLIRRYLLGVNVLLGDEM----GL 66
+++ D D+ D D + F + E++ +QV GL+WL +N +L DEM GL
Sbjct: 106 EMVADADKADELVVFDKSPFYIENGEMRDYQVRGLNWLASLQHNNINGILADEMVFFKGL 165
Query: 67 GKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRN 126
GKTLQ IS L Y+K + P LV+ P S W++E K+ P + +G+ R
Sbjct: 166 GKTLQTISLLGYMKHYKNQASPHLVIVPKSTLQNWLNEFNKWCPSINAHILIGDEAARNV 225
Query: 127 IRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPS 186
R + V P FDVL TTY+++L + L ++ W Y IIDEA R+KN
Sbjct: 226 TLRDV------------VLPQKFDVLCTTYEMMLKVKTQLRKLNWKYIIIDEAHRIKNEK 273
Query: 187 SVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSS 246
S L +RE RLL+TGTP+QNNL ELWAL++F +P +F + F S F S
Sbjct: 274 SKLSETVRE-LNSQNRLLITGTPLQNNLHELWALLNFLLPDIFTSSEDFDSWF------S 326
Query: 247 SAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYA 300
S G I + L +L F+LRR K + + L P E+ V +Q++ Y
Sbjct: 327 SEAMSGNI-DLVQRLHKVLQPFLLRRIKSDVEKS----LLPKKEVKVYVGLSKMQREWYT 381
Query: 301 SILRKE--------------LPKLLALSSRTANHQSLQNTA---------------SGKL 331
IL K+ L +L + NH L + A GK+
Sbjct: 382 KILLKDIDVINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPGPPYTTDQHLVDNCGKM 441
Query: 332 VVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHF 391
VVLD LL +L G RVL+F+Q ++ LD+L+D+ RKY Y RLDGS +R +AI +
Sbjct: 442 VVLDKLLSRLQEQGSRVLIFSQFSRMLDLLEDYCWWRKYEYCRLDGSTAHVDRTSAIEAY 501
Query: 392 SVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAH 451
+ A + F+FM++TRAGG+G+NL AD VI Y+ DWNPQ D QA+ RAH
Sbjct: 502 N-----------APDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAH 550
Query: 452 RIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
RIGQ V L+TE+TV++ I+ +AE KLRL + V+
Sbjct: 551 RIGQKKQVKVFRLITENTVDDRIIEKAEAKLRLDNIVI 588
>gi|359472760|ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
Length = 2355
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 183/507 (36%), Positives = 266/507 (52%), Gaps = 69/507 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
L PHQ+E L+WL + + NV+L DEMGLGKT+ A +FLS L F + P LVL P
Sbjct: 756 GSLFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSACAFLSSLYFEFKATLPCLVLVP 815
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W++E + + P L V+ Y G + R IR+ + + F+VLLT
Sbjct: 816 LSTMPNWLAEFSLWAPNLNVVEYHGCAKARAIIRQHEWHGTDPNGSNKKTASYKFNVLLT 875
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++VL D L +PW ++DE RLKN S L+++L F R+L+TGTP+QNN+
Sbjct: 876 TYEMVLADSSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNS-FSFQHRVLLTGTPLQNNI 934
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
E++ L++F P+ F +L F F D E+ LK +++ MLRR K
Sbjct: 935 GEMYNLLNFLQPATFPSLFSFEEKFNDLT----------TAEKVEELKKLVAPHMLRRLK 984
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQSLQN--- 325
+ ++ +PP TE ++ +Q + Y ++L K +LL + QS+ N
Sbjct: 985 KDAMQ----NIPPKTERMVPVELSSIQAEYYRAMLTKNY-QLLRNMGKGVAQQSMLNIVM 1039
Query: 326 ------------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
AS KL +L +LK LY GHRVL+F+QMT
Sbjct: 1040 QLRKVCNHPYLIPGTEPDSGSGEFLHEMRIKASAKLTLLHSMLKVLYKEGHRVLIFSQMT 1099
Query: 356 QTLDILQDFL--ELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
+ LDIL+D+L E ++ER+DGS+ +R AAI F+ FVF+
Sbjct: 1100 KLLDILEDYLTTEFGPRTFERVDGSVSVADRQAAIARFNQDKT------------RFVFL 1147
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STR+ G+G+NL ADTVI Y+ D+NP D QA+ RAHRIGQ N +L LV +VEE
Sbjct: 1148 LSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEER 1207
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKE 500
I++ A++KL L V +EV++
Sbjct: 1208 ILQLAKKKLMLDQLFVNKSGSQKEVED 1234
>gi|66801013|ref|XP_629432.1| myb domain-containing protein [Dictyostelium discoideum AX4]
gi|60462823|gb|EAL61023.1| myb domain-containing protein [Dictyostelium discoideum AX4]
Length = 1221
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 211/619 (34%), Positives = 323/619 (52%), Gaps = 92/619 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ ++ +QV GL+WLI+ Y G+N +L DEMGLGKTLQ IS L YL + GP L++
Sbjct: 273 SGTMRDYQVYGLNWLIQLYERGINGILADEMGLGKTLQTISLLGYLSEYKGIRGPHLIIA 332
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S GW E ++ P L V+R+ G +E+R +I++ K FDV +
Sbjct: 333 PKSTLSGWAKEFTRWCPFLRVVRFHGSKEEREDIKKNQLIFKK------------FDVCI 380
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+V + ++ + W Y IIDEA R+KN +SVL +R F RLL+TGTP+QNN
Sbjct: 381 TTYEVAIREKSTFKKFSWRYIIIDEAHRIKNENSVLSKGVR-MFNSQFRLLITGTPLQNN 439
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELW+L++F +P VF + + F F A ++ + +E L +L F+LRR
Sbjct: 440 LHELWSLLNFLLPDVFSSSDDFDKWFDLANNTENQ------QEVIDKLHKVLRPFLLRRI 493
Query: 274 KQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELP-------------KLLALS 314
K ++ + LPP EI + +QK+ Y +L K+L +LL +
Sbjct: 494 KTEVEKS----LPPKKEIKLFVGLSTMQKEWYKRLLSKDLDAVVVGAKGNTGRVRLLNIC 549
Query: 315 ---SRTANHQSLQNTA--------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + A SGK+ +LD LLKKL G RVL+F+QM++
Sbjct: 550 MQLRKACNHPYLFDGAEEEPYTTGEHLIDNSGKMALLDKLLKKLKERGSRVLIFSQMSRM 609
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL+D++ R Y Y R+DGS + R +I +++ G+D F F+++TR
Sbjct: 610 LDILEDYMLYRGYKYARIDGSTESIVRENSIENYN-----------KPGSDLFAFLLTTR 658
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+ L AD VI ++ DWNPQ+D QA RAHRIGQ V VTE+++EE ++ +
Sbjct: 659 AGGLGITLNTADIVILFDSDWNPQMDLQAQDRAHRIGQTKPVTVYRFVTENSMEEKMVEK 718
Query: 478 AERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKA--INNEESDDLR 533
AE KL+L V+ R V+ + ++L +++ FG +F K+ I +E+ D +
Sbjct: 719 AEMKLQLDALVIQQ---GRLVEANKNAKPEELLAMLRFGADDIFKSKSSTITDEDIDSIL 775
Query: 534 LSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASY 593
G + EQ++ K + NP+ + +L M + S+ A Y
Sbjct: 776 KKG---------EEKTEQLNSKV-KDLASNPLKFQSDGNLYMFDGVNYKNSHSS---AGY 822
Query: 594 RSWVEKFKEASESSSNTIA 612
W E K ++ + T+A
Sbjct: 823 --WAETLKRERKTVAGTVA 839
>gi|384499300|gb|EIE89791.1| hypothetical protein RO3G_14502 [Rhizopus delemar RA 99-880]
Length = 1170
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 178/500 (35%), Positives = 268/500 (53%), Gaps = 70/500 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS ++YL + GP+L++
Sbjct: 371 VGGRLKDYQLKGLQWMVSLYNNHLNGILADEMGLGKTIQTISLITYLIEKKRQNGPYLII 430
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G RR ++ + + F VL
Sbjct: 431 VPLSTLTNWTLEFEKWAPSVRKIAYKGPPSVRRELQ-------------NEIRYGDFQVL 477
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTT++ ++ D+ LS+I W + I+DE R+KN +S L VLR+++ RL++TGTP+QN
Sbjct: 478 LTTFEYIIKDRPILSKIKWLHMIVDEGHRMKNTNSKLTVVLRQYYHTKYRLILTGTPLQN 537
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELWAL++F +P +F ++ F F + + + E+ L +L
Sbjct: 538 NLPELWALLNFILPKIFKSVKSFEEWFNTPFSNQGVADKVALNEEEQLLIIKRLHKVLRP 597
Query: 268 FMLRRTK-----------QKLVECGHLMLPPLTEITVLQKK----VYASILRKELPKLLA 312
F+LRR K ++++ C L PL Q K +Y S K +
Sbjct: 598 FLLRRLKRDVEAELPDKVERVIRCK---LSPLQTHLYTQMKRNGTLYTSDASKGKSGIKG 654
Query: 313 LSS------RTANH-------QSLQNTA----------SGKLVVLDLLLKKLYNSGHRVL 349
L++ + NH +SL N + SGK +LD +L KL +GHRVL
Sbjct: 655 LNNTIMQLRKICNHPFVFEEVESLVNPSGMSNDLLYRVSGKFELLDRMLPKLQQTGHRVL 714
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F QMTQ + I++DFL + +SY RLDGS ++++R S + RL+++ +
Sbjct: 715 IFFQMTQVMSIMEDFLNYKGFSYLRLDGSTKSDDR----------SELLRLFNDP-ASPY 763
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ V L++ ++
Sbjct: 764 FVFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIFRLISTNS 823
Query: 470 VEEVIMRRAERKLRLSHNVV 489
VEE I+ RA KL + V+
Sbjct: 824 VEESILARANYKLDIDGKVI 843
>gi|71022005|ref|XP_761233.1| hypothetical protein UM05086.1 [Ustilago maydis 521]
gi|46097644|gb|EAK82877.1| hypothetical protein UM05086.1 [Ustilago maydis 521]
Length = 1834
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 180/490 (36%), Positives = 263/490 (53%), Gaps = 76/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK Q+ GL+WL + N +L DEMGLGKT+Q +SFLSYL S GPFLV+ PLS
Sbjct: 586 LKDFQMTGLNWLAYLWSKNENGILADEMGLGKTVQTVSFLSYLFHSCYQYGPFLVVVPLS 645
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W+++ + P L + Y+G R IR + K+ + F+VL+TTY
Sbjct: 646 TLPAWMNQFEHWAPDLNAIAYMGNSASREMIREYEFGPAKK---------MKFNVLVTTY 696
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ +L D+ L Q+ W Y +DEA RLKN + LY L F +LL+TGTP+QNN+ E
Sbjct: 697 EFILKDRAELGQVKWQYLAVDEAHRLKNSEAQLYEALNS-FHAAGKLLITGTPLQNNVKE 755
Query: 217 LWALMHFCMPSVFGTLNQF-LSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
L AL+HF P F F ++ V IKE L + MLRR K+
Sbjct: 756 LIALLHFLRPDQFDLDVDFDINNVDQTV----------IKELHEKLDNV----MLRRLKK 801
Query: 276 KLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS-------------R 316
+++ LP + E++ +Q+++Y +IL + L ++ +
Sbjct: 802 DVIK----ELPTKSEKILRVEMSAMQQRMYKAILTRNYSLLSGATTAQFSLLNIAIELKK 857
Query: 317 TANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+NH L + SGK+V+LD LL +L GHRVL+F+QM + LD
Sbjct: 858 ASNHPYLFDGTEIISDNREETLKGLVMHSGKMVLLDKLLARLKADGHRVLIFSQMVRMLD 917
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL D++ LR Y ++RLDG++ +E R AI HF+ + G+ F F++STRAG
Sbjct: 918 ILSDYMSLRGYIHQRLDGTVSSEIRKKAIEHFNAE-----------GSPDFAFLLSTRAG 966
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL ADTVI ++ DWNPQ D QA+ RAHR+ HV +T+ TVEE ++ RA+
Sbjct: 967 GLGINLETADTVIIFDSDWNPQNDLQAMARAHRLNSKFHVSVFRFLTKDTVEEDVLERAK 1026
Query: 480 RKLRLSHNVV 489
RK+ L + ++
Sbjct: 1027 RKMVLEYAII 1036
>gi|162464313|ref|NP_001105087.1| chromatin complex subunit A101 [Zea mays]
gi|18463957|gb|AAL73042.1|AF461813_1 chromatin complex subunit A101 [Zea mays]
Length = 779
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/523 (33%), Positives = 285/523 (54%), Gaps = 72/523 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q++G+ WLI + G+N +L D+MGLGKT+Q I FL++LK M GP+L++ P
Sbjct: 214 GKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGMH-GPYLIIAP 272
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS WV+E+++FTP L + Y G + R IRR +NV P F +++T
Sbjct: 273 LSTLSNWVNEISRFTPSLVSIIYHGGKAARAEIRRKFMP--------TNVGP-DFPIVVT 323
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + D FL+ W Y ++DE RLKN +L L+ M +LL+TGTP+QNNL
Sbjct: 324 SYEMAMFDAKFLAAYKWKYVVVDEGHRLKNAKCLLLKQLK-RIPMDNKLLLTGTPLQNNL 382
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
+ELW+L++F +P +F + +F S F + + ++ ++ + L IL F+LRR K
Sbjct: 383 AELWSLLNFILPDIFSSHQEFESWFDFSGGNEETDEKKRL-HVVSKLHAILRPFLLRRMK 441
Query: 275 QKLVECGHLMLPPLTEITV--------------LQKKVYASILRKE-------------L 307
+ + + MLP EI + L +K + + L +E L
Sbjct: 442 EDVEQ----MLPRKKEIIIYANMTEQQKQIQHHLIEKTFDNYLHEESDIILKRPGIRARL 497
Query: 308 PKLLALSSRTANHQSLQNTA----------------SGKLVVLDLLLKKLYNSGHRVLLF 351
L+ + NH L + GK + D LL L H+VL+F
Sbjct: 498 HNLMIQLRKNCNHPDLLESPVDSTGLYPPVEKLLEQCGKFQLFDRLLNFLMAQKHKVLVF 557
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFS-VQSAIERLYSEAGGNDAF 410
+Q T+ LDI++ +L+ + ++ R+DG+++ EER I F+ V S++
Sbjct: 558 SQWTKVLDIIEYYLDSKGHAVCRIDGNVKLEERRRQIAEFNDVNSSMR------------ 605
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+F++STRAGG+G+NL AADT I Y+ DWNPQ+D QA+ R HRIGQ V L T H+V
Sbjct: 606 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATSHSV 665
Query: 471 EEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
E +++RA KL+L H V+G +++ + +A++ +L +++
Sbjct: 666 EGRMIKRAFGKLKLEHVVIGKGQFEQDRAKPSALDEGELLALL 708
>gi|340905259|gb|EGS17627.1| WD40 repeat-containing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 2313
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 181/528 (34%), Positives = 278/528 (52%), Gaps = 79/528 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS ++YL + GP+LV+
Sbjct: 1359 VGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLITYLIEKKKQNGPYLVI 1418
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G N R+ E +++ F VL
Sbjct: 1419 VPLSTLTNWNLEFEKWAPSVTKVVYKGPP----NARKMQQEKIRQGK---------FQVL 1465
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS+I W + IIDE R+KN +S L +++++ RL++TGTP+QN
Sbjct: 1466 LTTYEYIIKDRPLLSKIKWFHMIIDEGHRMKNTNSKLSATIQQYYTTRFRLILTGTPLQN 1525
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL+ELWA+++F +P++F + F F ++ + ++ E+ L +L
Sbjct: 1526 NLAELWAMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQILVIRRLHKVLRP 1585
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKE--------------- 306
F+LRR K+ + + LP TE + LQ ++Y ++ +
Sbjct: 1586 FLLRRLKKDVEKD----LPDKTEKVIKCKFSALQARLYKQMVTHQKIIVSDGKGGKTGAR 1641
Query: 307 -LPKLLALSSRTANH-------------QSLQNT----ASGKLVVLDLLLKKLYNSGHRV 348
L ++ + NH Q++ N +GK +LD +L K +GHRV
Sbjct: 1642 GLSNMIMQLRKLCNHPFVFDEVENQMNPQNISNDLLWRTAGKFELLDRILPKYKATGHRV 1701
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F QMT +DI++D+L R Y RLDG+ ++E+R ++ F+ A +
Sbjct: 1702 LMFFQMTAIMDIMEDYLRYRGLHYLRLDGTTKSEDRSELLKLFN-----------APDSP 1750
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V + L+T +
Sbjct: 1751 YFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSN 1810
Query: 469 TVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+VEE I+ RA KL + V+ DR+ RT +ET DL
Sbjct: 1811 SVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLETADL 1858
>gi|300120100|emb|CBK19654.2| unnamed protein product [Blastocystis hominis]
Length = 1570
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 189/508 (37%), Positives = 267/508 (52%), Gaps = 84/508 (16%)
Query: 29 AEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGP 88
AEF +L+ +Q+EG++WL+ ++ N +L DEMGLGKT Q+ F+ + P
Sbjct: 67 AEFKDGNQLRSYQIEGVNWLLWNWINNRNSILADEMGLGKTAQSTLFMYTVLKKYKLKYP 126
Query: 89 FLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP 148
F+V+ P+S W +E+ ++T + V+ + G + R NI R YE + +
Sbjct: 127 FIVVAPVSTLPHWEAEIRRWT-DMHVVIFHGTVKSRENILR--YEWRSKIGE-------- 175
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
FDVL+T Y++ L++ L IPW I+DEA RLK ++ L +LR ++L+TGT
Sbjct: 176 FDVLITNYEICLVESALLQSIPWSGVIVDEAHRLKGKNNKLGEMLRT-MNFGCKVLLTGT 234
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QNN ELW L++F P FG ++QF + F D RG Q L +L
Sbjct: 235 PLQNNTEELWTLLNFLQPERFGDVDQFQAEFGDM--------RGVA--QLEKLHTLLKPL 284
Query: 269 MLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASIL----------RKELPKLLA 312
MLRR K+ + + L P E+T +QKK Y ++ K LP L+
Sbjct: 285 MLRRMKEDVEKS----LKPKEETVINVEMTAMQKKFYRAVYDRNTSVIGNESKNLPSLIN 340
Query: 313 LS---SRTANHQSLQN----------------------------TASGKLVVLDLLLKKL 341
+ + NH L T+SGK+V+LD LL KL
Sbjct: 341 IMMEIRKCCNHPYLIRGAESSIMLEIRTPASDWKGEELVLQALLTSSGKMVLLDKLLPKL 400
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+ GHRVLLF+QMT LDI+QD+L L+ Y +ER+DG +++ +R AAI FS
Sbjct: 401 QSQGHRVLLFSQMTHMLDIIQDYLTLKGYLFERIDGGVKSNDRQAAIERFS--------- 451
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
A G+D F+F+I TRAGGVG+NL AADTVI Y+ DWNPQ D QA R HRIGQ V
Sbjct: 452 --APGSDRFIFLICTRAGGVGINLTAADTVIIYDSDWNPQNDIQAQARCHRIGQDKAVKV 509
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV 489
L+T T E + +RA KL L V+
Sbjct: 510 YRLITNRTYEMEMFQRANLKLGLDKAVL 537
>gi|325183015|emb|CCA17469.1| hypothetical protein SELMODRAFT_162307 [Albugo laibachii Nc14]
Length = 1363
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 198/525 (37%), Positives = 284/525 (54%), Gaps = 75/525 (14%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
FG ++ +Q+EGL+W++ G+N +L DEMGLGKTLQ IS L+Y + GP +
Sbjct: 256 FGT---MRAYQLEGLNWMVNLAHQGINGILADEMGLGKTLQTISVLAYFSQFENISGPHI 312
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ-SQMSNVSPLPF 149
VL P S W+ E ++ P L V++ G +++R+++ +++Q S+ + PF
Sbjct: 313 VLVPKSTLSNWMMEFHRWCPSLRVVKLHGNKQERKDV-------IQDQLCPGSSDTTRPF 365
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR--RLLMTG 207
DV +TT+++ + ++ L + W Y IIDEA R+KN +S V+R LM RLL+TG
Sbjct: 366 DVCVTTFEMCMKEKTALCKFAWRYLIIDEAHRIKNEASQFAKVVR---LMDTQYRLLLTG 422
Query: 208 TPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSA 267
TP+QNNL ELWAL++F +P VF + +F F V A K + L IL
Sbjct: 423 TPLQNNLHELWALLNFLLPDVFASSEEFDEWFNLDVDDDEAKK-----QMIGQLHKILRP 477
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQ 321
FMLRR K + + LPP E ++++QK +Y S+L +++ + +
Sbjct: 478 FMLRRLKADVEKS----LPPKKETLLFVGMSLMQKALYKSLLLRDMDTITGKVGAGVSRS 533
Query: 322 SLQNTA-------------------------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LQN GK+V+LD LLKKL G RVLL
Sbjct: 534 ALQNIVMQLRKCCGHPYLFEGQEDRTLDPLGDHVVENCGKMVLLDKLLKKLKQRGSRVLL 593
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F QMT+ LDI +DF +RKY Y R+DG E+R +SAIE Y+E + F
Sbjct: 594 FTQMTRVLDIFEDFCRMRKYEYCRIDGRTSYEDR---------ESAIE-AYNELDSS-KF 642
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF++STRAGG+G+NL AD VI Y+ DWNPQ D QA RAHRIGQ V VT +V
Sbjct: 643 VFLLSTRAGGLGINLYTADIVILYDSDWNPQADLQAQDRAHRIGQKKEVNVYRFVTSDSV 702
Query: 471 EEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFG 515
EE I+ RA++KL+L VV + + K+ ++D L I FG
Sbjct: 703 EEKIIERAQQKLKLDAMVVQQGRL--QDKQSKLSKSDMLEMIRFG 745
>gi|171686770|ref|XP_001908326.1| hypothetical protein [Podospora anserina S mat+]
gi|170943346|emb|CAP68999.1| unnamed protein product [Podospora anserina S mat+]
Length = 1395
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/532 (34%), Positives = 277/532 (52%), Gaps = 79/532 (14%)
Query: 29 AEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGP 88
A+ V +LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS ++YL + GP
Sbjct: 556 ADILVGGKLKEYQIKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLVTYLIEKKHQNGP 615
Query: 89 FLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLP 148
+LV+ PLS W E K+ P + + Y G N R+ E ++
Sbjct: 616 YLVIVPLSTLTNWNLEFDKWAPSVSKIVYKGPP----NTRKLQQEKIRRGE--------- 662
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L +++++ RL++TGT
Sbjct: 663 FQVLLTTYEYIIKDRPLLSKIKWFHMIIDEGHRMKNSNSKLSATIQQYYSTRFRLILTGT 722
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKG 263
P+QNNL+ELWA+++F +P++F + F F ++ + ++ E+ L
Sbjct: 723 PLQNNLAELWAMLNFVLPNIFKSAKTFDDWFNTPFANTGGQDKMELTEEEQILVIRRLHK 782
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKE----------- 306
+L F+LRR K+ + + LP TE + LQ ++Y ++ +
Sbjct: 783 VLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQARLYKQMVTHQKILVSDGKGGK 838
Query: 307 -----LPKLLALSSRTANH-------------QSLQNT----ASGKLVVLDLLLKKLYNS 344
L ++ + NH S+ N +GK +LD +L K +
Sbjct: 839 TGARGLSNMIMQLRKLCNHPFVFDEVENQMNPMSVSNDLLWRTAGKFELLDRILPKYKAT 898
Query: 345 GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEA 404
GHRVL+F QMT +DI++DFL R Y RLDG+ ++E+R +R F+ +
Sbjct: 899 GHRVLMFFQMTAIMDIMEDFLRFRGIQYLRLDGTTKSEDRSDLLRDFNRPDS-------- 950
Query: 405 GGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINL 464
F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V + L
Sbjct: 951 ---PYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRILRL 1007
Query: 465 VTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
++ +VEE I+ RA KL + V+ DR+ RT +ET D+
Sbjct: 1008 ISSASVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLETADM 1059
>gi|384483643|gb|EIE75823.1| hypothetical protein RO3G_00527 [Rhizopus delemar RA 99-880]
Length = 453
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 259/466 (55%), Gaps = 35/466 (7%)
Query: 42 VEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGW 101
++GL W+I Y +N +L DEMGLGKT+Q I+ +SYL ++ + GPFL++ PLS W
Sbjct: 1 MKGLEWMISLYNNYINGILADEMGLGKTIQTIALISYLIETKKTNGPFLIIAPLSTLSNW 60
Query: 102 VSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLM 161
SE K++P ++ + YVG+ + R+ + ++ + V+LTT+++
Sbjct: 61 DSEFDKWSPGIKKIAYVGKPKARKKLGLNIFSAEND-----------CQVILTTFELATK 109
Query: 162 DQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALM 221
DQ L+Q+ W Y IIDE R+KN +S + LR+ + RL+++GTP+QNNL ELWAL+
Sbjct: 110 DQQILAQVEWLYIIIDEGHRMKNINSKVSICLRKEYKSKHRLILSGTPLQNNLPELWALL 169
Query: 222 HFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSAFMLRRTKQK 276
+F +P +F + F F + + + E+ L +L F+LRR K
Sbjct: 170 NFLLPKIFQSSKSFEEWFNSPFITQGFTDQSDLNEEEQLLIIKRLHTVLRPFLLRRLKTD 229
Query: 277 LVECGHLMLPPLTEITVLQKKVYASILRKELPKLLALSSR-TANHQSLQNTASGKLVVLD 335
+ + LP E V K S L+ ++ L + + AN ++ SGK VLD
Sbjct: 230 V----EVSLPDKVEYIV---KCQMSSLQLQIQNQLVKNDKLLANRHNMIKICSGKFEVLD 282
Query: 336 LLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQS 395
+L KL + HRVL+F QMT+ ++I++D+L + Y + RLDGS++A+ER+ I F+ S
Sbjct: 283 RMLPKLQQTRHRVLIFFQMTKVMNIMEDYLSWKGYCFLRLDGSVKADERYTLITQFNKPS 342
Query: 396 AIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQ 455
+ F+F++STRAGG GLNL ADTVI ++ DWNP D QA RAHRIGQ
Sbjct: 343 S-----------PYFIFLLSTRAGGTGLNLQTADTVILFDSDWNPHQDLQAQGRAHRIGQ 391
Query: 456 MNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKER 501
+ V VT +++EE I+ A+ KL + V+ D E+
Sbjct: 392 THPVHIYRFVTSNSIEEKILEVAQHKLSIDGKVIQAGKFDNRSTEK 437
>gi|168037602|ref|XP_001771292.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162677381|gb|EDQ63852.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1032
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 190/514 (36%), Positives = 282/514 (54%), Gaps = 72/514 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y GVN +L DEMGLGKTLQ IS L+YL GP +V+
Sbjct: 164 INGKMREYQLAGLNWLIRLYENGVNGILADEMGLGKTLQTISLLAYLHEYCGISGPHMVV 223
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++ G +++R R + K FD+
Sbjct: 224 GPKSTLGNWMNEIRRFCPVLRPFKFHGNQDERNYQREELLVAGK------------FDIC 271
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN SS+L +R F RLL+TGTP+QN
Sbjct: 272 VTSFEMAIKERTALRKFSWRYIIIDEAHRIKNESSILAKTMR-LFSTNYRLLITGTPLQN 330
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + TF + S + ++ +Q L +L F+LRR
Sbjct: 331 NLHELWALLNFLLPEIFSSA----ETFDEWFQISGENDQHEVVQQ---LHKVLRPFLLRR 383
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---------PKLLALS--- 314
K VE G LPP E ++ LQK+ Y ++L+K++ +LL ++
Sbjct: 384 LKSD-VERG---LPPKKETILKVGMSTLQKQYYRALLQKDMDAINTGGERKRLLNIAMQL 439
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 440 RKCCNHPYLFEGAEPGPPYTTGEHLVDTAGKMVLLDKLLPKLKQRQSRVLIFSQMTRLLD 499
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ + R Y Y R+DG+ ++R +AI F+ A ++ F F++STRAG
Sbjct: 500 ILEDYCQYRTYQYCRIDGNTTGDDRESAIDQFN-----------APNSEKFCFLLSTRAG 548
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE T+EE ++ RA
Sbjct: 549 GLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEFTIEEKVIERAY 608
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
+KL L V+ + E+ AV D+L ++
Sbjct: 609 KKLALDALVIQQG----RLAEQKAVNKDELLQMV 638
>gi|396082326|gb|AFN83936.1| SNF2 DNA/RNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 828
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/502 (35%), Positives = 272/502 (54%), Gaps = 71/502 (14%)
Query: 16 DNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISF 75
D++ + T V + F + ELK +Q+EGL+WLI + +N +L DEMGLGKTLQ I+F
Sbjct: 37 DDEPIEPYTFVSSPRF-ILHELKDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAF 95
Query: 76 LSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV 135
L Y+++ + L++ P S W E KF P +V + R++ R
Sbjct: 96 LGYIRYVRKEKKKHLIVLPKSTLANWKREFKKFMPNYKVRVFYSSRKEMR---------- 145
Query: 136 KEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE 195
KE ++ + +D LTTY++ + + L+ + W Y IIDEA R+KN S+L ++R
Sbjct: 146 KEAEEIMSSR---WDACLTTYEMCINAKNILNTVNWSYIIIDEAHRIKNEHSLLSKIVR- 201
Query: 196 HFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIK 255
F RLL+TGTP+QNN+ ELWAL++F +P +F +F +
Sbjct: 202 IFSCDHRLLITGTPLQNNVHELWALLNFIVPEIFNDAEKFERYVMNIDEGDG-------- 253
Query: 256 EQFTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKEL-- 307
E ++ +L F LRR K VE G LPP ++++ +Q++ Y +L+++L
Sbjct: 254 EAIKRIRSVLQLFFLRREKID-VEKG---LPPKKIINLYSKLSAMQREWYRMLLKRDLSP 309
Query: 308 ------PKLLALS-----SRTANHQSLQNTA--------------SGKLVVLDLLLKKLY 342
PK + ++ + NH L A SGK+++LD LL
Sbjct: 310 LGNTRDPKGMLMNVVMQLRKCCNHPYLFPDAEPEPYTNDKHIIENSGKMMMLDKLLANFK 369
Query: 343 NSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYS 402
G RVL+F+QM+ LDIL+D+ + Y Y R+DGS ER AI F+
Sbjct: 370 AKGSRVLIFSQMSMMLDILEDYAVFKGYKYCRIDGSTSYRERTEAIDAFN---------- 419
Query: 403 EAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSI 462
A G+D F+F+++TRAGG+G+NL ADTV+ ++ DWNPQ+D QA RAHRIGQ V+
Sbjct: 420 -AEGSDKFIFLLTTRAGGLGINLSTADTVVLFDSDWNPQMDLQAQDRAHRIGQKKQVVVF 478
Query: 463 NLVTEHTVEEVIMRRAERKLRL 484
L++E+TVEE I+ R+ +KLRL
Sbjct: 479 RLISENTVEERIVYRSLQKLRL 500
>gi|402590468|gb|EJW84398.1| chromatin-remodeling complex ATPase chain isw-1 [Wuchereria
bancrofti]
Length = 1063
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/491 (36%), Positives = 268/491 (54%), Gaps = 71/491 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
E++ +Q+ GL+WLI G+N +L DEMGLGKTLQ ++ + ++K + + GP LV+
Sbjct: 164 NGEMRDYQIRGLNWLISLQHNGINGILADEMGLGKTLQTVAVIGFMKHYKNASGPHLVIA 223
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W++E K+ P L+ + +G E R ++ R + + P +DVL+
Sbjct: 224 PKSTLQNWINEFGKWCPSLKAIALIGIAEARADLIR------------NEILPGKWDVLV 271
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++VL ++ L + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNN
Sbjct: 272 TSYEMVLKEKSLLRKYAWQYLVIDEAHRIKNEHSKLSEIVRE-FKSKHRLLITGTPLQNN 330
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P +F + F S F + + + + + L +L F+LRR
Sbjct: 331 LHELWALLNFLLPDMFALASDFDSWFTNDMMGNH--------DLVSRLHKVLKPFLLRRL 382
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKELP--------------KLLAL 313
K + + L P E+ + +Q++ Y IL K++ +L
Sbjct: 383 KSDVEKT----LLPKKEVKIYVGLSKMQREWYTRILMKDIDVVNGAGKLEKARIMNILMH 438
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+V+LD LL KL G RVL+F+ M++ L
Sbjct: 439 LRKCCNHPYLFDGAEPGPPYTTDQHLVDNSGKMVLLDKLLVKLKAQGSRVLIFSSMSRML 498
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
D+L+D+ R Y Y RLDG +ER +I F+ + D F+FM++TRA
Sbjct: 499 DLLEDYCWWRGYRYCRLDGQTVHDERQKSIDEFNKPDS-----------DKFIFMLTTRA 547
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AAD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TV+E I+ RA
Sbjct: 548 GGLGINLTAADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVDERIIERA 607
Query: 479 ERKLRLSHNVV 489
E KL L V+
Sbjct: 608 EMKLHLDSIVI 618
>gi|168012021|ref|XP_001758701.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162690311|gb|EDQ76679.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1220
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 189/513 (36%), Positives = 273/513 (53%), Gaps = 83/513 (16%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F + L P+Q+EGL++L + +V+L DEMGLGKT+Q+IS L L + P
Sbjct: 287 KFLIGGSLHPYQLEGLNFLRFAWEQNKHVILADEMGLGKTIQSISLLGSLVEENVGL-PH 345
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM-------- 141
LV+ PLS W E A + P++ V+ YVG + R +R+ YE Q
Sbjct: 346 LVVAPLSTLRNWEREFATWCPQMNVVMYVGSSQARAILRQ--YEFFFPQKSSKKSKDKGK 403
Query: 142 ------SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE 195
S + FDVLLT+Y+++ +D L + W I+DE RLKN S L+ L
Sbjct: 404 KKMAGESKQDRVKFDVLLTSYEMINLDTAILKALKWECLIVDEGHRLKNKDSKLFQTLTT 463
Query: 196 HFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIK 255
F R+L+TGTP+QNNL EL+ LMHF F +L +F F+D +
Sbjct: 464 -FSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFNSLEEFQQEFQDINQ----------E 512
Query: 256 EQFTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRK---- 305
EQ L +L+ +LRR K+ +++ +PP E++ LQK+ Y +IL K
Sbjct: 513 EQVGRLHKMLAPHLLRRVKKDVLK----EMPPKKELILRVELSSLQKEFYKAILTKNYQI 568
Query: 306 ----------------ELPKLLA------------LSSRTANHQSLQNTASGKLVVLDLL 337
EL KL + AN Q L+N SGKL++LD +
Sbjct: 569 LAKQGGPQVSLTNVVMELRKLCGHPYLLEGVEPTVRNQAEANRQLLEN--SGKLLLLDKM 626
Query: 338 LKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAI 397
+ KL+ GHRVL+++Q T+ LDIL+D+L L+K+ YER+DG I ER I ++ ++
Sbjct: 627 MTKLHAQGHRVLIYSQFTRMLDILEDWLHLKKWGYERIDGKISGSERQIRIDRYNAPNST 686
Query: 398 ERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMN 457
+ F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ N
Sbjct: 687 K-----------FCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQQN 735
Query: 458 HVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG 490
V+ LVT T+EE +M+ ++K+ L H VVG
Sbjct: 736 KVMIFRLVTRGTIEERMMQMTKKKMVLEHLVVG 768
>gi|224100361|ref|XP_002311847.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222851667|gb|EEE89214.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 670
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 187/505 (37%), Positives = 279/505 (55%), Gaps = 68/505 (13%)
Query: 18 DERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS 77
D G T + A + +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L
Sbjct: 192 DGLSGNTRLVAQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLG 251
Query: 78 YLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKE 137
YL + GP +V+ P S W++E+ +F P L ++++G ++R++IR + K
Sbjct: 252 YLHEFRGITGPHMVVAPKSTLGNWMNEIRRFCPVLRAIKFLGNPDERKHIREELLVAGK- 310
Query: 138 QSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHF 197
FDV +T++++ + ++ L + W Y IIDEA R+KN +S+L +R +
Sbjct: 311 -----------FDVCVTSFEMAIKEKSTLRRFSWRYIIIDEAHRIKNENSLLSKTMR-LY 358
Query: 198 LMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ 257
RLL+TGTP+QNNL ELWAL++F +P +F + F F+ + + +E
Sbjct: 359 NTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEV 411
Query: 258 FTSLKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKEL---- 307
L +L F+LRR K VE G LPP E ++ +QK+ Y ++L+K+L
Sbjct: 412 VQQLHKVLRPFLLRRLKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVVN 467
Query: 308 -----PKLLALS---SRTANHQSLQN---------------TASGKLVVLDLLLKKLYNS 344
+LL ++ + NH L T +GK+V+LD LL KL
Sbjct: 468 AGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLVTNAGKMVLLDKLLPKLKER 527
Query: 345 GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEA 404
RVL+F+QMT+ LDIL+D+L + Y R+DG+ E+R A+I F+
Sbjct: 528 DSRVLIFSQMTRLLDILEDYLIFSGHQYCRIDGNTGGEDRDASIDAFN-----------R 576
Query: 405 GGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINL 464
G++ F F++STRAGG+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V
Sbjct: 577 PGSEKFCFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRF 636
Query: 465 VTEHTVEEVIMRRAERKLRLSHNVV 489
TE+T+EE ++ RA +KL L V+
Sbjct: 637 CTEYTIEEKVIERAYKKLALDALVI 661
>gi|440295604|gb|ELP88516.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
invadens IP1]
Length = 1745
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 193/547 (35%), Positives = 298/547 (54%), Gaps = 86/547 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EGL+WL+ + G +L DEMGLGKT+Q ++F+ +L+ Q PGPFL++ PLS
Sbjct: 603 LREYQIEGLNWLVFNWCRGKGCILADEMGLGKTVQVVAFMEHLRTFQKLPGPFLIVTPLS 662
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV-KEQSQMSNVSPLPFDVLLTT 155
+ W E+ ++T ++ V+ Y+G +E R+ I+ + ++ K++ ++S + F L+TT
Sbjct: 663 TLEHWRREICEWT-EMNVVVYLGSKENRQMIQHYEWFYLDKDEKELS--KQIKFHALVTT 719
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP--RRLLMTGTPIQNN 213
Y++V+ D L QI W ++DEAQRLKN S L L E +P ++L+TGTPIQNN
Sbjct: 720 YEMVMNDYEALQQIHWQVIVVDEAQRLKNKQSKLNRTLSE---IPAYHKILLTGTPIQNN 776
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
ELW L+++ P F ++ F F + GK ++ SL+ + ++LRR
Sbjct: 777 TDELWTLLNYVNPIGFPSIEAFHQKFGE----------GKTADEVKSLQVEIQPYLLRRV 826
Query: 274 KQKLVECGHLMLPPLTEI------TVLQKKVYASILRK------------ELPKLLALS- 314
KQ + + +PP EI T++QKK Y ++ K +P LL L
Sbjct: 827 KQNVEKS----IPPKEEILIEVELTLVQKKYYRALYEKNREFLNKGCVGQNVPHLLNLMM 882
Query: 315 --SRTANH----------------------QSLQNTASGKLVVLDLLLKKLYNSGHRVLL 350
+ NH +S SGK+V+LD LL KL HRVL+
Sbjct: 883 QLRKVCNHPFLIPGVEEKEVGGNYDDPDFYESELVKCSGKMVLLDKLLPKLKQDDHRVLI 942
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+Q+ LD+++ +L +KY+YERLDGS+++ +R Q+AI+R D F
Sbjct: 943 FSQLKGVLDVIEKYLGFKKYTYERLDGSVKSNDR---------QNAIDRFMK----GDRF 989
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF++ TRAGG+G+NL ADTVI Y+ DWNPQ D QA R HRIGQ V LV+++T
Sbjct: 990 VFLLCTRAGGIGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQKKEVKVYRLVSKNTY 1049
Query: 471 EEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF----DPKAIN 525
E + RA KL L ++ + ++ E KE + DD+ ++ +G + D K N
Sbjct: 1050 ERYMFERASMKLGLDQAILSN--INHESKETEKMSKDDIADLLKYGAYGLLKDEDEKNSN 1107
Query: 526 NEESDDL 532
N +D+
Sbjct: 1108 NFGEEDI 1114
>gi|402079087|gb|EJT74352.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1449
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 277/535 (51%), Gaps = 79/535 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A V +LK +QV+GL W+I Y +N +L DEMGLGKT+Q IS ++YL +
Sbjct: 549 TEQANMLVGGKLKEYQVKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIERKQQ 608
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E K+ P + + Y G R+ Q +
Sbjct: 609 LGPYLVIVPLSTLTNWTLEFEKWAPTVSKVVYKGPPNARK-------------QQQDKIR 655
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L + +++++ RL++
Sbjct: 656 QGRFQVLLTTYEYIIKDRPILSKIKWFHMIIDEGHRMKNSNSKLTSTIQQYYQTRFRLIL 715
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNL+ELWA+++F +P++F + F F ++ + ++ E+
Sbjct: 716 TGTPLQNNLAELWAMLNFTLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQILVIRR 775
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKE-------- 306
L +L F+LRR K+ + + LP TE + LQ +VY +++ +
Sbjct: 776 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQARVYNQMVKHQKLVVSDGK 831
Query: 307 --------LPKLLALSSRTANH----------QSLQNTA-------SGKLVVLDLLLKKL 341
L ++ + NH + NT+ +GK +LD +L K
Sbjct: 832 GGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPSNTSNDLLWRTAGKFELLDRILPKY 891
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+GHRVL+F QMT +DI++DFL R Y RLDG+ ++E+R + F+ +
Sbjct: 892 KATGHRVLMFFQMTAIMDIMEDFLRFRGLLYLRLDGTTKSEDRSELLFQFNRPDS----- 946
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 947 ------PYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 1000
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+ L+ ++VEE I+ RA KL + ++ DR+ RT +ET D+
Sbjct: 1001 LRLIHSNSVEEKILDRARFKLDMDGKIIQAGRFDNKSSETDRDAMLRTLLETADM 1055
>gi|358338433|dbj|GAA40391.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5, partial [Clonorchis
sinensis]
Length = 841
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 186/500 (37%), Positives = 273/500 (54%), Gaps = 73/500 (14%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+A+ F V E++ +Q+ GL+W+I+ Y +N +L DEMGLGKTLQ IS L Y+K +
Sbjct: 79 EASPFFVKGGEMRDYQIRGLNWMIQLYHDNINGILADEMGLGKTLQTISMLGYMKHCRHK 138
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP +V+ P S W++E+ ++ P L + +G +E+R I R +
Sbjct: 139 SGPHIVIVPKSTMTNWMNEVKRWVPTLRAVALIGSQEERAQIIR------------DELL 186
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
+D+++T+Y++ + ++ L + + Y +IDEA R+KN S L ++R+ F RLL+
Sbjct: 187 GKEWDMIVTSYEICIKEKAILRKYHYVYLVIDEAHRIKNEKSKLSEIVRQ-FRSHNRLLI 245
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGIL 265
TGTP+QNNL ELW+L++F MP +F + F FK S+ ++ I+ L IL
Sbjct: 246 TGTPLQNNLHELWSLLNFLMPDLFSSSELFDEMFK----VSTEEEQNLIQR----LHAIL 297
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE------------- 306
F+LRR K + + LPP E + +Q+ +Y IL K+
Sbjct: 298 KPFILRRIKADVEK----KLPPKKECKIYIGLSKMQRDLYTKILMKDIDIVNSTGNKVDR 353
Query: 307 --LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVL 349
L +L + NH L + GK+++LD LL +L G RVL
Sbjct: 354 VRLLNILMQLRKCCNHPYLFDGLEPGPPYTTDQHLIDNCGKMLLLDKLLARLKEQGSRVL 413
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QMT+ LDIL+D+ R + Y RLDG R E+R I ++ G+
Sbjct: 414 IFSQMTRMLDILEDYCLWRGHEYFRLDGQTRHEDRQVFIDEYN-----------RPGSTK 462
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVFM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+TEHT
Sbjct: 463 FVFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRLITEHT 522
Query: 470 VEEVIMRRAERKLRLSHNVV 489
VEE I+ RAE KLRL + V+
Sbjct: 523 VEERIIMRAEMKLRLDNLVI 542
>gi|302769197|ref|XP_002968018.1| hypothetical protein SELMODRAFT_440203 [Selaginella moellendorffii]
gi|300164756|gb|EFJ31365.1| hypothetical protein SELMODRAFT_440203 [Selaginella moellendorffii]
Length = 1234
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 195/547 (35%), Positives = 294/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL S+ GP +V+
Sbjct: 196 IIGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHESRGISGPHMVV 255
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++ G +++R R Y+ V + FDV
Sbjct: 256 APKSTLGNWMNEIRRFCPVLRAFKFHGTQDERAQQRD--YQLVAGK----------FDVC 303
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 304 VTSFEMAIKERAALKKFSWRYIIIDEAHRIKNENSLLAKTMR-LFSTNYRLLITGTPLQN 362
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 363 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVIQQLHKVLRPFLLRR 415
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELP---------KLLALS--- 314
K VE G LPP E ++ +Q+ Y ++L+K++ +LL ++
Sbjct: 416 LKSD-VERG---LPPKKETILKVGMSQMQRNYYKALLQKDIDAINTGGERRRLLNIAMQL 471
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A SGK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 472 RKCCNHPYLFQGAEPGPPYFTGEHLVENSGKMVLLDKLLPKLKQRSSRVLIFSQMTRLLD 531
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y R+DG E+R AI F+ + G++ F+F++STRAG
Sbjct: 532 ILEDYCIFRGYPSCRIDGGTSGEDREFAIEAFNRE-----------GSEKFIFLLSTRAG 580
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V T++T+EE ++ RA
Sbjct: 581 GLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTQYTIEEKVIERAY 640
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF---DPKAINNEESDDLRLS 535
+KL L V+ + E+ AV D+L ++ FG + + I E+ D +
Sbjct: 641 KKLALDALVIQQG----RLAEQRAVNKDELLQMVRFGAEMVFSANDSTITEEDIDRIIAK 696
Query: 536 GLNSMVE 542
G + E
Sbjct: 697 GEEATAE 703
>gi|345570508|gb|EGX53329.1| hypothetical protein AOL_s00006g195 [Arthrobotrys oligospora ATCC
24927]
Length = 1621
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 188/511 (36%), Positives = 276/511 (54%), Gaps = 77/511 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q++G++WL + + N +L DEMGLGKT+Q ++FLS+LK GPFLV+ P
Sbjct: 472 GELRDFQMKGVNWLRYNWSVHRNSILADEMGLGKTVQTVAFLSWLKNEMEIDGPFLVVVP 531
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W K+ P L + Y G + R I+ YE +++ + F V++T
Sbjct: 532 LSTVPAWCETFVKWAPDLNFIVYNGPNKARGIIQD--YEMFQDEKRKKT----KFHVMIT 585
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ V D L I W Y +DEA RLKN S LY L++ F + RLL+TGTP+QNNL
Sbjct: 586 TYEYVNHDAQLLQSIRWNYLAVDEAHRLKNVESRLYESLKQ-FKVEDRLLITGTPLQNNL 644
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
SEL AL+ F P G +N + + S A +++ L+ L ++LRR K
Sbjct: 645 SELVALLEFLDP---GNINIDRNI---DLQSEGA------EQEIKKLQETLQPYILRRVK 692
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------S 315
K VE LP T E++ +Q + Y +I + L A S
Sbjct: 693 -KDVEAS---LPQKTEKIIRVELSDIQTEWYKNIYTRNYSALNAKSKQKVSLLNIVMELK 748
Query: 316 RTANH------------QSLQNTA---------SGKLVVLDLLLKKLYNSGHRVLLFAQM 354
+ +NH + L+ A SGK+V++D L K+ GHRVL+F+QM
Sbjct: 749 KISNHPFLFPSAEEEIMKGLETKADRLNAMIMCSGKMVLMDRFLTKMKADGHRVLIFSQM 808
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
LD+LQ++L LR +SY+R+DG++ A R AI ++ A G++ F F++
Sbjct: 809 VNMLDLLQEYLTLRGFSYQRIDGTVSASNRKTAIDRYN-----------APGSEDFCFLL 857
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STRAGG+G+NL +ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ V++ T+EE +
Sbjct: 858 STRAGGLGINLTSADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMIYRFVSKDTIEEEV 917
Query: 475 MRRAERKLRLSHNV---VGDDVVDREVKERT 502
+ RA KL + + V + D + +VK+ T
Sbjct: 918 LERARVKLLMEYAVYMGITDSTITDKVKKNT 948
>gi|330845465|ref|XP_003294605.1| hypothetical protein DICPUDRAFT_4822 [Dictyostelium purpureum]
gi|325074901|gb|EGC28868.1| hypothetical protein DICPUDRAFT_4822 [Dictyostelium purpureum]
Length = 1004
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 186/493 (37%), Positives = 268/493 (54%), Gaps = 72/493 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ ++ +QV GL+WLI+ Y G+N +L DEMGLGKTLQ IS L YL + GP L++
Sbjct: 155 SGTMRDYQVNGLNWLIQLYERGINGILADEMGLGKTLQTISLLGYLSEYKGIRGPHLIIA 214
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S GW E AK+ P L V+++ G +E+R I+R K FDV +
Sbjct: 215 PKSTLSGWTKEFAKWCPFLRVVKFHGSKEEREEIKRNSLIFKK------------FDVCI 262
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+V + ++ + W Y IIDEA R+KN +SVL +R F RLL+TGTP+QNN
Sbjct: 263 TTYEVAIREKAAFKKFSWRYIIIDEAHRIKNENSVLSKGVR-LFNSQFRLLITGTPLQNN 321
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELW+L++F +P VF + F F D ++ + +E L +L F+LRR
Sbjct: 322 LHELWSLLNFLLPDVFSSSEDFDKWF-DLANTENQ------QEVIDKLHKVLRPFLLRRL 374
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS------------ 315
K ++ + LPP EI + +QK Y +L K++ ++ S
Sbjct: 375 KSEVEKS----LPPKKEIKLFVGLSSMQKDWYKRLLTKDIEAVMNPGSKGQAARVRLLNI 430
Query: 316 -----RTANHQSLQN--------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH L + T SGK+V+LD LLKKL G RVL+F+QM +
Sbjct: 431 CMQLRKACNHPYLFDGAEEEPYTTGEHLITNSGKMVLLDKLLKKLQERGSRVLIFSQMAR 490
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D++ R Y Y R+DGS + R +I +F+ G++ F F+++T
Sbjct: 491 MLDILEDYMLYRNYRYARIDGSTDSVSRENSIDNFN-----------KPGSELFAFLLTT 539
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+ L AD VI ++ DWNPQ+D QA RAHRIGQ V VTE ++EE ++
Sbjct: 540 RAGGLGITLNTADVVILFDSDWNPQMDLQAQDRAHRIGQTKPVTVYRFVTEASMEEKMVE 599
Query: 477 RAERKLRLSHNVV 489
+AE KL+L V+
Sbjct: 600 KAEMKLQLDALVI 612
>gi|303391164|ref|XP_003073812.1| SNF2 DNA/RNA helicase [Encephalitozoon intestinalis ATCC 50506]
gi|303302960|gb|ADM12452.1| SNF2 DNA/RNA helicase [Encephalitozoon intestinalis ATCC 50506]
Length = 823
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 278/500 (55%), Gaps = 67/500 (13%)
Query: 16 DNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISF 75
D++ + T + + +F + ELK +Q+EGL+WLI + +N +L DEMGLGKTLQ I+F
Sbjct: 33 DDEPIEPYTFISSPKF-IIHELKDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAF 91
Query: 76 LSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEV-LRYVGEREQRRNIRRTMYEH 134
L Y+++ + L++ P S W E KF P + + Y +E +R M
Sbjct: 92 LGYIRYVKKERKRHLIVLPKSTLANWKREFRKFMPNYKARIFYSSRKEMKREAEEIMSSK 151
Query: 135 VKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR 194
+D LTTY++ + + LS++ W Y IIDEA R+KN S+L ++R
Sbjct: 152 --------------WDACLTTYEMCINAKNILSKVNWSYIIIDEAHRIKNEHSLLSKIVR 197
Query: 195 EHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKI 254
F RLL+TGTP+QNN+ ELWAL++F +P +F +F ++ V S I
Sbjct: 198 -IFSCDHRLLITGTPLQNNVHELWALLNFIVPEIFNDAEKF----ENYVMSIEEEDGEAI 252
Query: 255 KEQFTSLKGILSAFMLRRTKQKLVECGHL---MLPPLTEITVLQKKVYASILRKEL---- 307
K ++ +L F LRR K VE G + ++ ++++ +Q++ Y +L+++L
Sbjct: 253 KR----IRNVLQLFFLRREKID-VEKGLIPKKIINLYSKLSPMQREWYKMLLKRDLSPLG 307
Query: 308 ----PKLLALS-----SRTANHQSLQNTA--------------SGKLVVLDLLLKKLYNS 344
PK + ++ + NH L A SGK++VLD LL+ L
Sbjct: 308 STRDPKGMLMNVVMQLRKCCNHPYLFPDAEPEPYTNDKHIIENSGKMIVLDKLLESLRAR 367
Query: 345 GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEA 404
G RVL+F+QM+ LDIL+D+ ++Y Y R+DGS ++R AI F+ A
Sbjct: 368 GSRVLIFSQMSMMLDILEDYAMFKEYEYCRIDGSTSYKDRTEAIDAFN-----------A 416
Query: 405 GGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINL 464
G++ F+F+++TRAGG+G+NL ADTVI ++ DWNPQ+D QA RAHRIGQ V+ L
Sbjct: 417 EGSEKFIFLLTTRAGGLGINLSTADTVILFDSDWNPQMDLQAQDRAHRIGQKKQVVVFRL 476
Query: 465 VTEHTVEEVIMRRAERKLRL 484
++E+TVEE I+ R+ +KL+L
Sbjct: 477 ISENTVEERIVYRSLQKLKL 496
>gi|168051599|ref|XP_001778241.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162670338|gb|EDQ56908.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1245
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 193/513 (37%), Positives = 274/513 (53%), Gaps = 83/513 (16%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F V L P+Q+EGL++L + +V+L DEMGLGKT+Q+IS L L + P
Sbjct: 287 KFLVGGSLHPYQLEGLNFLRFAWEQNKHVILADEMGLGKTIQSISLLGSL-IEENVGLPH 345
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM-------- 141
LV+ PLS W E A + P++ V+ YVG + R +R+ YE Q
Sbjct: 346 LVVAPLSTLRNWEREFATWCPQMNVVMYVGSSQARAILRQ--YEFFFPQKSSKKSKDKGK 403
Query: 142 ------SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE 195
S + FDVLLT+Y+++ +D L + W I+DE RLKN S L+ L
Sbjct: 404 KKMAGESKQDRVKFDVLLTSYEMINLDTTILKALKWECLIVDEGHRLKNKDSKLFQTLTT 463
Query: 196 HFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIK 255
F R+L+TGTP+QNNL EL+ LMHF F +L +F F+D +
Sbjct: 464 -FSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFNSLEEFQQEFQDINQ----------E 512
Query: 256 EQFTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRK---- 305
EQ L +L+ +LRR K+ +++ +PP E++ LQK+ Y +IL K
Sbjct: 513 EQVGRLHKMLAPHLLRRVKKDVLK----EMPPKKELILRVELSSLQKEFYKAILTKNYQI 568
Query: 306 ----------------ELPKLLA------------LSSRTANHQSLQNTASGKLVVLDLL 337
EL KL + AN Q L+N SGKL++LD +
Sbjct: 569 LAKQGGPQVSLTNVVMELRKLCGHPYLLEGVEPTVRNQAEANRQLLEN--SGKLLLLDKM 626
Query: 338 LKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAI 397
+ KL++ GHRVL+++Q T+ LDIL+D+L L+K+ YER+DG I ER Q I
Sbjct: 627 MTKLHSQGHRVLIYSQFTRMLDILEDWLHLKKWGYERIDGKISGSER---------QIRI 677
Query: 398 ERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMN 457
+R S + F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ N
Sbjct: 678 DRYNSP--NSTKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQQN 735
Query: 458 HVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG 490
V+ LVT T+EE +M+ ++K+ L H VVG
Sbjct: 736 KVMIFRLVTRGTIEERMMQMTKKKMVLEHLVVG 768
>gi|328769067|gb|EGF79112.1| hypothetical protein BATDEDRAFT_17244 [Batrachochytrium
dendrobatidis JAM81]
Length = 988
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 177/517 (34%), Positives = 274/517 (52%), Gaps = 79/517 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +Q++GL+WLI Y G+N +L DEMGLGKTLQ+ISFL YLK + GP LV+ P
Sbjct: 126 GKMRDYQIQGLNWLISIYENGINGILADEMGLGKTLQSISFLGYLKHFLDNKGPHLVIVP 185
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W SE ++ P + + G +++R + S++ F+V +T
Sbjct: 186 KSTLHNWFSEFKRWVPSITAFIFHGPKDERAGL------------ISSSLHSGKFEVCIT 233
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP--RRLLMTGTPIQN 212
+Y++ L+++ S++ W Y +IDEA R+KN +S L ++R LM RLL+TGTP+QN
Sbjct: 234 SYEMCLLEKSAFSKVAWQYIVIDEAHRIKNENSALSQIVR---LMNCRNRLLLTGTPLQN 290
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P VF + F + F S + G + L +L F+LRR
Sbjct: 291 NLHELWALLNFLLPDVFSSAEDFDNWF-------STDQEGDQDKVVKQLHKVLRPFLLRR 343
Query: 273 TKQKLVECGHLMLPP-----LTEITVLQKKVYASILRKELPKLLALSSRTANHQSLQNTA 327
K + + +LP ++ +Q+ Y +L K++ + + R + LQN
Sbjct: 344 IKSDVEKS---LLPKKRINLYVGMSTMQRMWYKRLLEKDIDAVNGAAGRKESKTRLQNIV 400
Query: 328 -------------------------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
SGK+ +LD LL+ L G RVLLF+QM++
Sbjct: 401 MQLRKCCNHPYLFDGAEPGPPYTTDQHLVDNSGKMALLDKLLQHLKAQGSRVLLFSQMSR 460
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ +++ Y RLDG+ E+R +I ++ + F+F+++T
Sbjct: 461 VLDILEDYCIWKEFDYCRLDGTTAHEDRINSIDEYNKPDS-----------SKFIFLLTT 509
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL AD VI Y+ DWNPQV + RAHRIGQ V+ +TE+ +EE ++
Sbjct: 510 RAGGLGINLATADIVIMYDNDWNPQVVTE--DRAHRIGQKKQVVIFRFITENAIEEKVID 567
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ V + K + DDL S+I
Sbjct: 568 RATQKLRLDQLVIQQGRVIQPTKNSSK---DDLVSMI 601
>gi|302821505|ref|XP_002992415.1| hypothetical protein SELMODRAFT_162307 [Selaginella moellendorffii]
gi|300139831|gb|EFJ06565.1| hypothetical protein SELMODRAFT_162307 [Selaginella moellendorffii]
Length = 1016
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 195/547 (35%), Positives = 294/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL S+ GP +V+
Sbjct: 135 IIGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHESRGISGPHMVV 194
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++ G +++R R Y+ V + FDV
Sbjct: 195 APKSTLGNWMNEIRRFCPVLRAFKFHGTQDERAQQRD--YQLVAGK----------FDVC 242
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 243 VTSFEMAIKERAALKKFSWRYIIIDEAHRIKNENSLLAKTMR-LFSTNYRLLITGTPLQN 301
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 302 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVIQQLHKVLRPFLLRR 354
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELP---------KLLALS--- 314
K VE G LPP E ++ +Q+ Y ++L+K++ +LL ++
Sbjct: 355 LKSD-VERG---LPPKKETILKVGMSQMQRNYYKALLQKDIDAINTGGERRRLLNIAMQL 410
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L A SGK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 411 RKCCNHPYLFQGAEPGPPYFTGEHLVENSGKMVLLDKLLPKLKQRSSRVLIFSQMTRLLD 470
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y R+DG E+R AI F+ + G++ F+F++STRAG
Sbjct: 471 ILEDYCIFRGYPSCRIDGGTSGEDREFAIEAFNRE-----------GSEKFIFLLSTRAG 519
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V T++T+EE ++ RA
Sbjct: 520 GLGINLATADIVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTQYTIEEKVIERAY 579
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLF---DPKAINNEESDDLRLS 535
+KL L V+ + E+ AV D+L ++ FG + + I E+ D +
Sbjct: 580 KKLALDALVIQQG----RLAEQRAVNKDELLQMVRFGAEMVFSANDSTITEEDIDRIIAK 635
Query: 536 GLNSMVE 542
G + E
Sbjct: 636 GEEATAE 642
>gi|367027062|ref|XP_003662815.1| SNF2-family ATP dependent chromatin remodeling factor like protein
[Myceliophthora thermophila ATCC 42464]
gi|347010084|gb|AEO57570.1| SNF2-family ATP dependent chromatin remodeling factor like protein
[Myceliophthora thermophila ATCC 42464]
Length = 1466
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 181/535 (33%), Positives = 278/535 (51%), Gaps = 79/535 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A V LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS ++YL +
Sbjct: 543 TEQASILVGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLITYLIEKKHQ 602
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E K+ P + + Y G N R+ E +++
Sbjct: 603 QGPYLVIVPLSTLTNWNLEFDKWAPSVAKVVYKGPP----NARKMQQEKIRQGK------ 652
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L +++++ RL++
Sbjct: 653 ---FQVLLTTYEYIIKDRPLLSKIKWFHMIIDEGHRMKNANSKLSATIQQYYSTRFRLIL 709
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNL+ELWA+++F +P++F + F F ++ + ++ E+
Sbjct: 710 TGTPLQNNLAELWAMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQILVIRR 769
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKE-------- 306
L +L F+LRR K+ + + LP TE + LQ ++Y ++ +
Sbjct: 770 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQARLYKQMVTHQKIAVSDAN 825
Query: 307 --------LPKLLALSSRTANH-------QSLQNTA----------SGKLVVLDLLLKKL 341
L ++ + NH ++ N A +GK +LD +L K
Sbjct: 826 GGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPANVSNDLLWRTAGKFELLDRILPKY 885
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+GHRVL+F QMT +DI++DFL R Y RLDG+ ++E+R +R F+ +
Sbjct: 886 KATGHRVLMFFQMTAIMDIMEDFLRFRGLHYLRLDGTTKSEDRSELLRQFNQPDS----- 940
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 941 ------PYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 994
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+ L++ +VEE I+ RA KL + V+ DR+ RT +ET D+
Sbjct: 995 LRLISSASVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLETADM 1049
>gi|344228405|gb|EGV60291.1| hypothetical protein CANTEDRAFT_127398 [Candida tenuis ATCC 10573]
Length = 1383
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 271/512 (52%), Gaps = 83/512 (16%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F EL+ Q+ GL+W+ + N +L DEMGLGKT+Q ++FLS+L +++ GP +
Sbjct: 340 FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLIYARRQNGPHI 399
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
++ PLS W K+ P L + YVG RR IR YE + ++ F+
Sbjct: 400 IVVPLSTMPAWQETFEKWAPDLNCIYYVGNSASRRVIRD--YEFYNDNNKFK------FN 451
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
+LLTTY+ +L D+ L I W + +DEA RLKN S LY L F + RLL+TGTP+
Sbjct: 452 ILLTTYEYILKDRIELGGIKWQFLAVDEAHRLKNSESSLYESLI-SFKVTNRLLITGTPL 510
Query: 211 QNNLSELWALMHFCMPSVFGTLNQF-LSTFKDAVHSSSAPKRGKIKEQF-TSLKGILSAF 268
QNN+ EL AL +F MP F + T D +EQ+ L+ + F
Sbjct: 511 QNNIKELSALCNFLMPGKFDIEQEIDFETPNDE------------QEQYIKDLQKSIMPF 558
Query: 269 MLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS------- 315
+LRR K+ + + LP T E++ LQ + Y +I+ K L +
Sbjct: 559 ILRRLKKDVEKS----LPSKTERILRVELSDLQTEYYRNIITKNYSALNTGTGGKNSQIS 614
Query: 316 ---------RTANH---------QSLQN--------------TASGKLVVLDLLLKKLYN 343
+ +NH + L+N +SGK+V+L+ LL +L
Sbjct: 615 LLNVMNELKKASNHPYLFDGVEDKVLRNYGSTTRDSILRGMIMSSGKMVLLEQLLTRLKK 674
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
GHRVL+F+QM + LDIL D+L ++ Y ++RLDG + + +R +I HF+
Sbjct: 675 EGHRVLIFSQMVRILDILGDYLSIKGYQFQRLDGGVPSAQRKISIDHFN----------- 723
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
A G+ F+F++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ HV
Sbjct: 724 APGSKDFIFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQTKHVSVYR 783
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVVGDDVVD 495
V++ TVEE I+ RA +K+ L + ++ + D
Sbjct: 784 FVSKDTVEEEILERARKKMILEYAIISLGITD 815
>gi|449329864|gb|AGE96132.1| atpase component of the two-subunit chromatin remodeling factor
[Encephalitozoon cuniculi]
Length = 823
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 175/486 (36%), Positives = 263/486 (54%), Gaps = 72/486 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V EL+ +Q+EGL+WLI + +N +L DEMGLGKTLQ I+FL Y+++ + L++
Sbjct: 49 VLYELRDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAFLGYIRYVKKERKRHLII 108
Query: 93 CPLSVTDGWVSEMAKFTPKLEV-LRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
P S W E KF P +V + Y +E RR M +D
Sbjct: 109 LPKSTLANWKREFRKFMPNYKVRVFYSSRKEMRREAEEIMSSR--------------WDA 154
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
LTTY++ + + L+ + W Y +IDEA R+KN S+L ++R F RLL+TGTP+Q
Sbjct: 155 CLTTYEMCINARSILNTVKWSYIVIDEAHRIKNEHSLLSKIVR-IFSCDHRLLITGTPLQ 213
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NN+ ELWAL++F +P +F +F S + E ++ +L F LR
Sbjct: 214 NNVHELWALLNFIVPEIFNDAEKFESYVMNIDEGDG--------EAIRRIRSVLQLFFLR 265
Query: 272 RTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKEL--------PKLLALS--- 314
R K + + LPP ++++ +Q++ Y +L+++L PK + ++
Sbjct: 266 REKIDV----EMSLPPKKIVNLYSKLSPMQREWYRMLLKRDLSPLGSTRDPKGMLMNVVM 321
Query: 315 --SRTANHQSLQNTA--------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L A SGK++VLD LL L G RVL+F+QM+ L
Sbjct: 322 QLRKCCNHPYLFPDAEPKPYTNDKHIIENSGKMIVLDKLLASLKAKGSRVLIFSQMSMML 381
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R+Y Y R+DGS +R AI F+ A G++ F+F+++TRA
Sbjct: 382 DILEDYAMFREYEYCRIDGSTSYRDRTEAIDGFN-----------AEGSEKFLFLLTTRA 430
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL ADTVI ++ DWNPQ+D QA RAHRIGQ V+ L++E+TVEE I+ R+
Sbjct: 431 GGLGINLSTADTVILFDSDWNPQMDLQAQDRAHRIGQKKQVVVFRLISENTVEERIVYRS 490
Query: 479 ERKLRL 484
+KL+L
Sbjct: 491 LQKLKL 496
>gi|255079182|ref|XP_002503171.1| SNF2 super family [Micromonas sp. RCC299]
gi|226518437|gb|ACO64429.1| SNF2 super family [Micromonas sp. RCC299]
Length = 1026
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/488 (37%), Positives = 269/488 (55%), Gaps = 67/488 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+++ +Q+ GL+W+IR + G+N +L DEMGLGKTLQ IS L YL + GP +V+ P
Sbjct: 164 GKMREYQLAGLNWMIRLFDHGINGILADEMGLGKTLQTISLLGYLSEYRGITGPHMVVVP 223
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
S W++E ++ P + ++ G +E R +++Q + + FDV +T
Sbjct: 224 KSTLGNWMNEFKRWCPMIRPFKFHGNQEAR----------AAQKAQYLDKNN-AFDVCVT 272
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++V+ ++ L + W Y IIDEA R+KN +S L V+R F RLL+TGTP+QNNL
Sbjct: 273 SYEMVIKEKNALKKFHWRYIIIDEAHRIKNENSRLSKVMR-MFACNNRLLITGTPLQNNL 331
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
ELWAL++F +P VFG QF F G E L +L F+LRR K
Sbjct: 332 HELWALLNFLLPEVFGDAGQFEEWFGTGTE-------GDNTEVVQQLHKVLRPFLLRRLK 384
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT----------- 317
++ + LPP E+ + +QK+ Y L+K++ + + R+
Sbjct: 385 AEVEKN----LPPKKEMILKVGMSEMQKEYYKRALQKDIQVVNSGGDRSRLLNMVMQLRK 440
Query: 318 -ANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L A SGK+V+LD LLKKL G RVL+F+QMT+ LDIL
Sbjct: 441 CCNHPYLFQGAEPGPPFFTDEHLVENSGKMVLLDKLLKKLKEKGSRVLIFSQMTRLLDIL 500
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D+L R+Y Y R+DG+ + R I ++ A G++ FVF++STRAGG+
Sbjct: 501 EDYLLFRRYKYCRIDGNTDGDTREDMIDSYN-----------APGSEKFVFLLSTRAGGL 549
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
G+NL ADTV+ Y+ DWNPQ+D QA+ RAHRIGQ V T+ +VEE ++ +A +K
Sbjct: 550 GINLTTADTVVIYDSDWNPQMDLQAMDRAHRIGQTKEVSVFRFCTDGSVEEKVIEKAYKK 609
Query: 482 LRLSHNVV 489
L L V+
Sbjct: 610 LALDALVI 617
>gi|19074741|ref|NP_586247.1| similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN
REMODELING FACTOR [Encephalitozoon cuniculi GB-M1]
gi|19069383|emb|CAD25851.1| similarity to THE ATPase COMPONENT OF THE TWO-SUBUNIT CHROMATIN
REMODELING FACTOR [Encephalitozoon cuniculi GB-M1]
Length = 823
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 175/486 (36%), Positives = 263/486 (54%), Gaps = 72/486 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V EL+ +Q+EGL+WLI + +N +L DEMGLGKTLQ I+FL Y+++ + L++
Sbjct: 49 VLYELRDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAFLGYIRYVKKERKRHLII 108
Query: 93 CPLSVTDGWVSEMAKFTPKLEV-LRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
P S W E KF P +V + Y +E RR M +D
Sbjct: 109 LPKSTLANWRREFRKFMPNYKVRVFYSSRKEMRREAEEIMSSR--------------WDA 154
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
LTTY++ + + L+ + W Y +IDEA R+KN S+L ++R F RLL+TGTP+Q
Sbjct: 155 CLTTYEMCINARSILNTVKWSYIVIDEAHRIKNEHSLLSKIVR-IFSCDHRLLITGTPLQ 213
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NN+ ELWAL++F +P +F +F S + E ++ +L F LR
Sbjct: 214 NNVHELWALLNFIVPEIFNDAEKFESYVMNIDEGDG--------EAIRRIRSVLQLFFLR 265
Query: 272 RTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKEL--------PKLLALS--- 314
R K + + LPP ++++ +Q++ Y +L+++L PK + ++
Sbjct: 266 REKIDV----EMSLPPKKIVNLYSKLSPMQREWYRMLLKRDLSPLGSTRDPKGMLMNVVM 321
Query: 315 --SRTANHQSLQNTA--------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L A SGK++VLD LL L G RVL+F+QM+ L
Sbjct: 322 QLRKCCNHPYLFPDAEPKPYTNDKHIIENSGKMIVLDKLLASLKAKGSRVLIFSQMSMML 381
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R+Y Y R+DGS +R AI F+ A G++ F+F+++TRA
Sbjct: 382 DILEDYAMFREYEYCRIDGSTSYRDRTEAIDGFN-----------AEGSEKFLFLLTTRA 430
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL ADTVI ++ DWNPQ+D QA RAHRIGQ V+ L++E+TVEE I+ R+
Sbjct: 431 GGLGINLSTADTVILFDSDWNPQMDLQAQDRAHRIGQKKQVVVFRLISENTVEERIVYRS 490
Query: 479 ERKLRL 484
+KL+L
Sbjct: 491 LQKLKL 496
>gi|392572066|gb|EIW65238.1| hypothetical protein TRAVEDRAFT_68776 [Trametes versicolor FP-101664
SS1]
Length = 1455
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 267/502 (53%), Gaps = 73/502 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS +++L S+ GP+LV+
Sbjct: 578 VGGTLKDYQIKGLQWMVSLYNNKLNGILADEMGLGKTIQTISLITFLIESKRQRGPYLVI 637
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E AK+ P + ++ Y G QR+ ++ +++ F V+
Sbjct: 638 VPLSTMTNWSGEFAKWAPNVSMIAYKGNPTQRKTLQ-------------TDLRTTNFQVV 684
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS++ W Y IIDE R+KN S L L +++ RL++TGTP+QN
Sbjct: 685 LTTYEYIIKDRNHLSRLKWLYIIIDEGHRMKNTQSKLVQTLTQYYHSRFRLILTGTPLQN 744
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELWAL++F +P VF ++ F F +S + ++ E+ L +L
Sbjct: 745 NLPELWALLNFALPKVFNSVKSFDEWFNTPFANSGTGDKIELNEEEALLIIRRLHKVLRP 804
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASI------------------- 302
F+LRR K+ VE LP E ++ LQ ++Y +
Sbjct: 805 FLLRRLKRD-VES---ELPDKVEKVIKVRMSALQAQLYKQMKKYKMIADGKDTKGKNGGV 860
Query: 303 --LRKELPKLLALSSRTANHQSLQN-------------TASGKLVVLDLLLKKLYNSGHR 347
L EL +L + +S+++ +SGK+ +L +L K + +GHR
Sbjct: 861 KGLSNELMQLRKICQHPFLFESVEDRVNPSSVIDDKLIRSSGKIELLHRILPKFFATGHR 920
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F QMT+ +DI++DFL++ + Y RLDG + E+R + F+ A +
Sbjct: 921 VLIFFQMTKVMDIMEDFLKMMGWKYLRLDGGTKTEDRAGHVALFN-----------APNS 969
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
+ VF++STRAGG+GLNL ADTV+ ++ DWNP D QA RAHRIGQ V + +TE
Sbjct: 970 EYKVFILSTRAGGLGLNLQTADTVVIFDSDWNPHADLQAQDRAHRIGQTKVVRILRFITE 1029
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
+VEE + RA KL + V+
Sbjct: 1030 KSVEEAMFARARYKLDIDDKVI 1051
>gi|303289625|ref|XP_003064100.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226454416|gb|EEH51722.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 743
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 181/504 (35%), Positives = 277/504 (54%), Gaps = 77/504 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+T ++ +Q++G+ WLI Y G+N +L D+MGLGKT+Q I FLS+L+ S+ GP+LV+
Sbjct: 161 MTVNMRDYQLKGVKWLIALYQNGLNGILADQMGLGKTVQTIGFLSHLR-SKGVLGPYLVI 219
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS WV+E KF P V+ Y G R R +IR H+ + + + P V+
Sbjct: 220 GPLSTLSNWVNEFHKFCPSFPVVLYHGSRTDRADIR---ARHLPITTPIKDTFP----VI 272
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP--RRLLMTGTPI 210
+T++++V+ D+ FLS+ + Y ++DE RLKN L +RE +P +LL+TGTP+
Sbjct: 273 VTSFEIVMADRKFLSKYNFKYLVVDEGHRLKNFDCKL---IRELKTIPTSNKLLLTGTPL 329
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSS----APKRGKIKEQFTSLKGILS 266
QNNL ELW+L+HF +P VF +L+QF S F + ++ KR K+ E+ L GIL
Sbjct: 330 QNNLPELWSLLHFLLPDVFSSLSQFQSWFDFSAEQNNDEKETSKRAKVVEK---LHGILK 386
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITVL------QKKVYASILRKELPKLL--------- 311
F+LRR K + + LP EI + QKK +++ K + ++L
Sbjct: 387 PFLLRRLKGDV----EVNLPRKKEIVIYAHMVETQKKFNDALVDKTIGEMLQKLSGGVAP 442
Query: 312 ----ALSS------RTANHQSLQNTA----------------SGKLVVLDLLLKKLYNSG 345
AL++ + NH L + GK +LD ++KKL G
Sbjct: 443 VGSTALNNMLMQLRKNCNHPDLISGGLDGSIMFPSAAELVEQCGKFRLLDRIMKKLRQRG 502
Query: 346 HRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAG 405
H+ L+F+QMT+ LD+++ + E + R+DGS+ +ER + F+ +++
Sbjct: 503 HKTLIFSQMTKMLDLIESYFEQQGSRVCRIDGSVAWQERKEQMDAFNTDPSVD------- 555
Query: 406 GNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
+F++STRAGG+G+NL AADTVI Y+ DWNP D QA+ R HRIGQ V + L
Sbjct: 556 -----IFLLSTRAGGLGINLTAADTVIIYDSDWNPHQDMQAMDRCHRIGQTKPVHVLRLA 610
Query: 466 TEHTVEEVIMRRAERKLRLSHNVV 489
T H+VE ++ RA KL L V+
Sbjct: 611 TAHSVEGKMLSRANSKLALEKLVI 634
>gi|395326370|gb|EJF58780.1| hypothetical protein DICSQDRAFT_156571 [Dichomitus squalens LYAD-421
SS1]
Length = 1470
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 177/502 (35%), Positives = 270/502 (53%), Gaps = 73/502 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS +++L S+ GP+LV+
Sbjct: 585 VGGTLKDYQLKGLQWMVSLYNNKLNGILADEMGLGKTIQTISLITFLIESKKQRGPYLVI 644
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W SE AK+ P ++++ Y G QR+ ++ + + N F V+
Sbjct: 645 VPLSTMTNWSSEFAKWAPSVKMISYKGNPAQRKVLQTDL--------RTGN-----FQVV 691
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS++ W Y IIDE R+KN S L L +++ RL++TGTP+QN
Sbjct: 692 LTTYEYIIKDRIHLSRMKWIYMIIDEGHRMKNTQSKLAQTLTQYYHSRYRLILTGTPLQN 751
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELWAL++F +P VF ++ F F +S + ++ E+ L +L
Sbjct: 752 NLPELWALLNFALPKVFNSVKSFDEWFNTPFANSGTGDKIELNEEEALLIIRRLHKVLRP 811
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASI------------------- 302
F+LRR K K VE LP E ++ LQ ++Y +
Sbjct: 812 FLLRRLK-KDVES---ELPDKVEKVIKVRMSALQSQLYKQMKKYKMIADGKDAKGKPGGV 867
Query: 303 --LRKELPKLLALSSRTANHQSLQN-------------TASGKLVVLDLLLKKLYNSGHR 347
L EL +L + +S+++ +SGK+ +L +L K + +GHR
Sbjct: 868 KGLSNELMQLRKICQHPFLFESVEDRVNPSSMIDDKLIRSSGKIELLSRILPKFFATGHR 927
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F QMT+ +DI++DFL++ + Y RLDG + E+R ++ F+ A +
Sbjct: 928 VLIFFQMTKVMDIMEDFLKMMGWKYLRLDGGTKTEDRAGHVQLFN-----------APNS 976
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
+ VF++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ V + +TE
Sbjct: 977 EYKVFILSTRAGGLGLNLQTADTVIIFDSDWNPHADLQAQDRAHRIGQTKVVRILRFITE 1036
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
+VEE + RA KL + V+
Sbjct: 1037 KSVEESMFARARYKLDIDDKVI 1058
>gi|170572145|ref|XP_001891999.1| Potential global transcription activator SNF2L [Brugia malayi]
gi|158603134|gb|EDP39180.1| Potential global transcription activator SNF2L, putative [Brugia
malayi]
Length = 1024
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 179/491 (36%), Positives = 268/491 (54%), Gaps = 71/491 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
E++ +Q+ GL+WLI G+N +L DEMGLGKTLQ ++ + ++K + + GP LV+
Sbjct: 164 NGEMRDYQIRGLNWLISLQHNGINGILADEMGLGKTLQTVAVIGFMKHYKNASGPHLVIA 223
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W++E K+ P L+ + +G E R ++ R + + P +DVL+
Sbjct: 224 PKSTLQNWINEFGKWCPSLKAIALIGIAEARADLIR------------NEILPGKWDVLV 271
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++VL ++ L + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNN
Sbjct: 272 TSYEMVLKEKSLLRKYVWQYLVIDEAHRIKNEHSKLSEIVRE-FKSKHRLLITGTPLQNN 330
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P +F + F S F + + + ++ L +L F+LRR
Sbjct: 331 LHELWALLNFLLPDMFALASDFDSWFTNDMMGN--------QDLVARLHKVLKPFLLRRL 382
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKELP--------------KLLAL 313
K + + L P E+ + +Q++ Y IL K++ +L
Sbjct: 383 KSDVEKT----LLPKKEVKIYVGLSKMQREWYTRILMKDIDVVNGAGKLEKARIMNILMH 438
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+V+LD LL KL G RVL+F+ M++ L
Sbjct: 439 LRKCCNHPYLFDGAEPGPPYTTDQHLVDNSGKMVLLDKLLVKLKAQGSRVLIFSSMSRML 498
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
D+L+D+ R Y Y RLDG +ER +I F+ + D F+FM++TRA
Sbjct: 499 DLLEDYCWWRGYRYCRLDGQTVHDERQKSIDEFNKPDS-----------DKFIFMLTTRA 547
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AAD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TV+E I+ RA
Sbjct: 548 GGLGINLTAADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVDERIIERA 607
Query: 479 ERKLRLSHNVV 489
E KL L V+
Sbjct: 608 EMKLHLDSIVI 618
>gi|255077387|ref|XP_002502335.1| SNF2 super family [Micromonas sp. RCC299]
gi|226517600|gb|ACO63593.1| SNF2 super family [Micromonas sp. RCC299]
Length = 712
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 185/501 (36%), Positives = 270/501 (53%), Gaps = 72/501 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
AEL+ +Q++G+ WLI Y G+N +L D+MGLGKT+Q I FLS+L+ S+ GP+LV+ P
Sbjct: 140 AELREYQLKGVKWLIALYQNGLNGILADQMGLGKTIQTIGFLSHLR-SKGILGPYLVIGP 198
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS WV+E KF P+ V+ Y G +++R IR + +S F V++T
Sbjct: 199 LSTLPNWVNEFNKFCPEFPVVLYHGSKQERAEIRN-------RRLPLSTTIKDTFPVIVT 251
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMP--RRLLMTGTPIQN 212
++++V+ D+ FL + + Y ++DE RLKN L +RE +P +LL+TGTP+QN
Sbjct: 252 SFEIVMADRKFLQKYNFKYLVVDEGHRLKNFDCKL---IRELKTIPTANKLLLTGTPLQN 308
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFK-----DAVHSSSAPKRGKIKEQFTSLKGILSA 267
+L ELW+L+HF +P VF L QF + F DA A KR K+ E+ L GIL
Sbjct: 309 SLPELWSLLHFLLPDVFSDLTQFQNWFDFSQQDDADGDKEASKRVKVVEK---LHGILKP 365
Query: 268 FMLRRTK----------QKLVECGHLMLPPLTEITVLQKKVYASILRK------------ 305
F+LRR K +++V H++ L K A +L+K
Sbjct: 366 FLLRRLKGDVETNLPRKKEIVLYAHMVETQKKFNDALVNKTIADVLKKISGDSGLVPAGS 425
Query: 306 -ELPKLLALSSRTANHQSLQNTA----------------SGKLVVLDLLLKKLYNSGHRV 348
L +L + NH L + GK +LD LL KL + GH+
Sbjct: 426 TALNNMLMQLRKNCNHPDLISGGLDGSIMFPSADELVEQCGKFRLLDRLLTKLRDKGHKT 485
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QMT+ LD+++ +LE + R+DGS++ +ER + F+ E G
Sbjct: 486 LIFSQMTKMLDLIESYLEQKGQKVCRIDGSVQWQERKKQMDEFNTNP-------EYG--- 535
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
VF++STRAGG+G+NL AADTVI Y+ DWNP D QA+ R HRIGQ V + L T H
Sbjct: 536 --VFLLSTRAGGLGINLTAADTVIIYDSDWNPHQDMQAMDRCHRIGQTKPVHVLRLATAH 593
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
+VE ++ RA KL L V+
Sbjct: 594 SVEGKMLSRANSKLALEKLVI 614
>gi|145513841|ref|XP_001442831.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410192|emb|CAK75434.1| unnamed protein product [Paramecium tetraurelia]
Length = 1024
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 179/513 (34%), Positives = 281/513 (54%), Gaps = 75/513 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q++GL WL+ Y +N +L DEMGLGKT+Q IS L YL ++ + GP+ ++ P
Sbjct: 358 GQLKQYQLQGLDWLVSLYNNNLNGILADEMGLGKTIQTISLLCYLIETKKNFGPYFIIVP 417
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +E K+ P ++ + Y G + R+ I + M +++ LT
Sbjct: 418 LSTLSNWSNEFEKWAPSIKKIIYKGSPQIRKEISKQM-------------RTTKWNICLT 464
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ VL D+ LS+ W Y I+DE R+KN S +L + + RRLL+TGTP+QNN+
Sbjct: 465 TYEYVLKDKLTLSKYEWKYIIVDEGHRMKNSRSKFAMILGQQYQSERRLLLTGTPLQNNI 524
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRG-KIKEQ-----FTSLKGILSAF 268
+ELWAL++F +P VF + F F+ ++ A ++ ++ E+ L +L F
Sbjct: 525 AELWALLNFLLPKVFSSCEDFEKWFQTPLNIMGASEKDIQLDEEEQLLIINRLHQVLRPF 584
Query: 269 MLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQS 322
+LRR K K VE LP TE ++ QKK+Y I ++ + S ++ + Q+
Sbjct: 585 LLRRVK-KDVEKE---LPRKTEYVIKIKLSAWQKKIYDQINQRGVMTFDQQSGKSGS-QA 639
Query: 323 LQN-----------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
LQN +SGK +LD ++ KL HR+L+F+Q
Sbjct: 640 LQNLMMQLRKICNHPYLFMLNLDMNRVTDEIWRSSGKFELLDRIIPKLLYFKHRLLIFSQ 699
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MTQ +DI++ F E R + Y RLDGS ++E+R + I+ F+ +++I Y+ +F+
Sbjct: 700 MTQLMDIMEAFFEYRGWRYLRLDGSTKSEDRESRIQLFNQENSI---YN--------IFL 748
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+GLNL +ADTV+ ++ DWNP +D QA RA+RIGQ N V + L+T +E
Sbjct: 749 LSTRAGGLGLNLQSADTVVLFDSDWNPMMDLQAQDRAYRIGQKNEVRVLRLITATQIEGN 808
Query: 474 IMRRAERKLRLSHNVV-----GDDVVDREVKER 501
I+ +AE K+ L ++ D+E +ER
Sbjct: 809 ILSKAEHKMGLDAVIIQAGLYNQRSTDQERRER 841
>gi|357476459|ref|XP_003608515.1| Chromodomain-helicase-DNA-binding protein, partial [Medicago
truncatula]
gi|355509570|gb|AES90712.1| Chromodomain-helicase-DNA-binding protein, partial [Medicago
truncatula]
Length = 1406
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 284/537 (52%), Gaps = 71/537 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L PHQ+E L+WL + + NV+L DEMGLGKT+ A +F+S L F P LVL PL
Sbjct: 734 LFPHQLEALNWLRKCWYKSRNVILADEMGLGKTISACAFISSLYFEFKVSRPCLVLVPLV 793
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSN-VSPLPFDVLLT 154
W++E A + P + V++Y G + R IR+ YE H + S ++ F+VLLT
Sbjct: 794 TMGNWLAEFALWAPDVNVVQYHGCAKARAIIRQ--YEWHASDPSGLNKKTEAYKFNVLLT 851
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++VL D +PW I+DE RLKN S L+++L R+L+TGTP+QNNL
Sbjct: 852 SYEMVLADYSHFRGVPWEVLIVDEGHRLKNSESKLFSLLNS-ISFQHRVLLTGTPLQNNL 910
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
E++ L++F P+ F +L+ F F D + E+ LK ++S MLRR K
Sbjct: 911 GEMYNLLNFLQPASFPSLSAFEERFNDLTSA----------EKVDELKKLVSPHMLRRLK 960
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKE------LPKLLALSS------- 315
+ ++ +PP TE ++ +Q + Y ++L K + K +A S
Sbjct: 961 KDAMQ----NIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGIAQQSMLNIVMQ 1016
Query: 316 --RTANH-----------------QSLQNTASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH ++ AS KL +L +LK LY GHRVL+F+QMT+
Sbjct: 1017 LRKVCNHPYLIPGTEPDSGSVEFLHEMRIKASAKLTLLHSMLKILYKEGHRVLIFSQMTK 1076
Query: 357 TLDILQDFL--ELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
LDIL+D+L E +YER+DGS+ +R AI F+ + FVF++
Sbjct: 1077 LLDILEDYLNIEFGPKTYERVDGSVSVTDRQTAIARFNQDKS------------RFVFLL 1124
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STR+ G+G+NL ADTVI Y+ D+NP D QA+ RAHRIGQ N +L LV +VEE I
Sbjct: 1125 STRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERI 1184
Query: 475 MRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEESDD 531
++ A++KL L G +EV++ T++L + L+ D NN D+
Sbjct: 1185 LQLAKKKLMLDQLFKGKSGSQKEVEDILKWGTEELFNDSCALNGKDTSENNNSNKDE 1241
>gi|312079660|ref|XP_003142270.1| transcription activator [Loa loa]
Length = 1062
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 267/493 (54%), Gaps = 74/493 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
E++ +Q+ GL+WLI G+N +L DEMGLGKTLQ ++ + ++K + + GP LV+
Sbjct: 163 NGEMRDYQIRGLNWLISLQHNGINGILADEMGLGKTLQTVAVIGFMKHYKNASGPHLVIA 222
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W++E K+ P L+ + +G E R ++ R + + P +DVL+
Sbjct: 223 PKSTLQNWINEFGKWCPSLKAIALIGIAEARADLIR------------NEILPGKWDVLV 270
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++VL ++ L + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNN
Sbjct: 271 TSYEMVLKEKSLLRKYAWQYLVIDEAHRIKNEHSKLSEIVRE-FKSRHRLLITGTPLQNN 329
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
L ELWAL++F +P +F + F S F D + + R L +L F+LR
Sbjct: 330 LHELWALLNFLLPDMFALASDFDSWFTTNDMMGNQDLVAR---------LHKVLKPFLLR 380
Query: 272 RTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELP--------------KLL 311
R K + + L P E+ + +Q++ Y IL K++ +L
Sbjct: 381 RLKSDVEKS----LLPKKEVKIYVGLSKMQREWYTKILMKDIDVVNGAGKLEKARIMNIL 436
Query: 312 ALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH L + A SGK+V+LD LL KL G RVL+F+ M++
Sbjct: 437 MHLRKCCNHPYLFDGAEPGPPYTTDQHLVDNSGKMVLLDKLLVKLKEQGSRVLIFSSMSR 496
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LD+L+D+ R Y Y RLDG +ER +I F+ + D F+FM++T
Sbjct: 497 MLDLLEDYCWWRSYRYCRLDGQTVHDERQKSIDEFNKPDS-----------DKFIFMLTT 545
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL AAD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TV+E I+
Sbjct: 546 RAGGLGINLTAADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVDERIIE 605
Query: 477 RAERKLRLSHNVV 489
RAE KL L V+
Sbjct: 606 RAEMKLHLDSIVI 618
>gi|219112733|ref|XP_002178118.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411003|gb|EEC50932.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 995
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 182/501 (36%), Positives = 259/501 (51%), Gaps = 71/501 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V ELK +Q+ GL WL+ Y +N +L DEMGLGKT+QAIS ++YL + + GP+LV+
Sbjct: 240 VGGELKEYQLLGLQWLVSLYNNKLNGILADEMGLGKTIQAISLIAYLMEFKQNLGPYLVI 299
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W +E K+ P ++ Y G R+ I R V F+VL
Sbjct: 300 VPLSTLSNWQNEFLKWCPAARLICYKGTPGLRKEIYR------------DQVRTGHFNVL 347
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ FL +I W Y I+DE R+KN S L + R+L+TGTP+ N
Sbjct: 348 LTTYEYIIKDKKFLRKIDWQYAIVDEGHRMKNAQSKFAVTLGTQYSTRYRVLLTGTPLMN 407
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTS----------LK 262
+LSELW+L++F +P++F ++ F F + S L
Sbjct: 408 DLSELWSLLNFLLPTIFNSVETFDQWFSRPFEQFGGGSNTDEGDDLLSNEERILVIHRLH 467
Query: 263 GILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELPKLLALSSR 316
+L FMLRR K ++++ LP E++ QK++Y I +K + + +
Sbjct: 468 ELLRPFMLRRVKSEVLD----QLPEKVEKVLRCELSSWQKELYKQISKKAVADTALMGTD 523
Query: 317 T-----------------ANHQSLQNT-----------ASGKLVVLDLLLKKLYNSGHRV 348
T NH L + +SGK+ +LD +L KL +GHRV
Sbjct: 524 TQAPSRGLNNIVMQLRKVCNHPYLFSPEGYHINDIIVRSSGKMALLDQMLPKLRAAGHRV 583
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F QMT + I++D+ LR Y RLDGS AEER + F+ A +
Sbjct: 584 LMFTQMTAVMTIMEDYFALRGYKSLRLDGSTPAEEREKRMYKFN-----------APDSP 632
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
FVF++STRAGG+GLNL +ADTVI ++ DWNP +D QA RAHRIGQ + V L+T
Sbjct: 633 YFVFLLSTRAGGLGLNLTSADTVIIFDSDWNPMMDLQAQDRAHRIGQRSDVSVFRLITYS 692
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
VEE I+ RA KL +S VV
Sbjct: 693 PVEEKILSRANEKLSVSELVV 713
>gi|393911512|gb|EFO21800.2| transcription activator [Loa loa]
Length = 1110
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 181/493 (36%), Positives = 267/493 (54%), Gaps = 74/493 (15%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
E++ +Q+ GL+WLI G+N +L DEMGLGKTLQ ++ + ++K + + GP LV+
Sbjct: 211 NGEMRDYQIRGLNWLISLQHNGINGILADEMGLGKTLQTVAVIGFMKHYKNASGPHLVIA 270
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W++E K+ P L+ + +G E R ++ R + + P +DVL+
Sbjct: 271 PKSTLQNWINEFGKWCPSLKAIALIGIAEARADLIR------------NEILPGKWDVLV 318
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++VL ++ L + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNN
Sbjct: 319 TSYEMVLKEKSLLRKYAWQYLVIDEAHRIKNEHSKLSEIVRE-FKSRHRLLITGTPLQNN 377
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
L ELWAL++F +P +F + F S F D + + R L +L F+LR
Sbjct: 378 LHELWALLNFLLPDMFALASDFDSWFTTNDMMGNQDLVAR---------LHKVLKPFLLR 428
Query: 272 RTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELP--------------KLL 311
R K + + L P E+ + +Q++ Y IL K++ +L
Sbjct: 429 RLKSDVEKS----LLPKKEVKIYVGLSKMQREWYTKILMKDIDVVNGAGKLEKARIMNIL 484
Query: 312 ALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH L + A SGK+V+LD LL KL G RVL+F+ M++
Sbjct: 485 MHLRKCCNHPYLFDGAEPGPPYTTDQHLVDNSGKMVLLDKLLVKLKEQGSRVLIFSSMSR 544
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LD+L+D+ R Y Y RLDG +ER +I F+ + D F+FM++T
Sbjct: 545 MLDLLEDYCWWRSYRYCRLDGQTVHDERQKSIDEFNKPDS-----------DKFIFMLTT 593
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL AAD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TV+E I+
Sbjct: 594 RAGGLGINLTAADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNTVDERIIE 653
Query: 477 RAERKLRLSHNVV 489
RAE KL L V+
Sbjct: 654 RAEMKLHLDSIVI 666
>gi|224111230|ref|XP_002315787.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222864827|gb|EEF01958.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1132
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 181/496 (36%), Positives = 277/496 (55%), Gaps = 75/496 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+EGL W++ + +N +L DEMGLGKT+Q IS ++YLK + GP L++ P
Sbjct: 416 GQLRSYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLKEKKGVCGPHLIVAP 475
Query: 95 LSVTDGWVSEMAKFTPKLEV--LRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
+V W++E + + + E+ Y G E+R+ IR + S+ N+ VL
Sbjct: 476 KAVLPNWINEFSTWISEAEIKAFLYDGCLEERKAIREQL-------SREGNLQ-----VL 523
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T YD+++ D+ FL +I W Y I+DE RLKN L + + M RRLL+TGTPIQN
Sbjct: 524 ITHYDLIMRDKAFLKKIQWQYMIVDEGHRLKNHECALAKTI-GGYQMKRRLLLTGTPIQN 582
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAP--KRGKI----KEQF---TSLKG 263
+L ELW+L++F +P +F + ++F F +AP RG++ +EQ L
Sbjct: 583 SLQELWSLLNFLLPHIFNSEDKFEEWF-------NAPFADRGEVSLTDEEQLLIIRRLHN 635
Query: 264 ILSAFMLRRTKQKLVEC--GHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRTANHQ 321
++ F+LRR K ++ + G + +++ QK Y + E+ ++ L + + +
Sbjct: 636 VIRPFILRRKKNEVEKYLPGKTQVLLKCDLSAWQKVYYQQVT--EMGRV-GLHTGSGKSK 692
Query: 322 SLQN----------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
SLQN ASGK +LD LL KL+ + HRVLLF+Q
Sbjct: 693 SLQNLTMQLRKCCNHPYLFVGDYNMWRKDEIMRASGKFELLDRLLPKLHATDHRVLLFSQ 752
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MT+ +DIL+ +L+L Y Y RLDGS + EER ++ F+ A + F+F+
Sbjct: 753 MTRLMDILEIYLQLHDYKYLRLDGSTKTEERGTLLKKFN-----------APDSPYFMFL 801
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+GLNL ADTVI ++ DWNPQ+D+QA RAHRIGQ V LV+ +VEEV
Sbjct: 802 LSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEV 861
Query: 474 IMRRAERKLRLSHNVV 489
I+ RA++K + V+
Sbjct: 862 ILERAKQKKGIDAKVI 877
>gi|356515042|ref|XP_003526210.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like
[Glycine max]
Length = 1440
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 193/545 (35%), Positives = 281/545 (51%), Gaps = 97/545 (17%)
Query: 28 AAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPG 87
+ EF L P+Q+EGL++L + +V+L DEMGLGKT+Q+I+FL+ L +SP
Sbjct: 277 SPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFKEGVSP- 335
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY--------------E 133
LV+ PLS W E A + P + VL YVG + R IR +
Sbjct: 336 -HLVVAPLSTLRNWEREFATWAPHMNVLMYVGSAQARSVIREYEFYFPKKQKKIKKKKSG 394
Query: 134 HVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVL 193
H+ +S+ + FDVLLT+Y+++ D L I W I+DE RLKN S L++ L
Sbjct: 395 HLISESKQDRIK---FDVLLTSYEMINFDTASLKPIKWECMIVDEGHRLKNKDSKLFSSL 451
Query: 194 REHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGK 253
++ + R+L+TGTP+QNNL EL+ LMHF FG+L +F FKD
Sbjct: 452 KQ-YSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQ--------- 501
Query: 254 IKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITVL------QKKVYASILRK-- 305
+EQ + L +L+ +LRR K+ +++ LPP E+ + QK+ Y +IL +
Sbjct: 502 -EEQISRLHKMLAPHLLRRVKKDVMK----ELPPKKELILRIELSSKQKEYYKAILTRNY 556
Query: 306 ------------------ELPKLLAL------------SSRTANHQSLQNTASGKLVVLD 335
EL KL ++ A Q L+ +SGKL +LD
Sbjct: 557 QILTRRGGAQISLINVVMELRKLCCHPYMLEGVEPDIDDAKEAFKQLLE--SSGKLQLLD 614
Query: 336 LLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQS 395
++ KL GHRVL+++Q LD+L+D+ + + YER+DG + ER I F+
Sbjct: 615 KMMVKLREQGHRVLIYSQFQHMLDLLEDYCAYKNWQYERIDGKVGGAERQVRIDRFN--- 671
Query: 396 AIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQ 455
A + F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ
Sbjct: 672 --------AKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQ 723
Query: 456 MNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG------------DDVVDREVKERTA 503
N VL L+T T+EE +M+ ++K+ L H VVG DD++ KE A
Sbjct: 724 TNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGSKELFA 783
Query: 504 VETDD 508
E D+
Sbjct: 784 DENDE 788
>gi|387593440|gb|EIJ88464.1| hypothetical protein NEQG_01154 [Nematocida parisii ERTm3]
gi|387597097|gb|EIJ94717.1| hypothetical protein NEPG_00241 [Nematocida parisii ERTm1]
Length = 1034
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 173/488 (35%), Positives = 262/488 (53%), Gaps = 63/488 (12%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++G+ W++ Y +N +L DEMGLGKT+QAI F+ Y+ + PFLV+ PLS
Sbjct: 366 LREYQLKGVEWMVSLYNNKLNGILADEMGLGKTVQAIVFICYILEKKQETDPFLVVVPLS 425
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W SE +++ P + VL Y G+ R+++++ E +DVLLTT+
Sbjct: 426 TFSNWQSEFSRWAPSIRVLPYKGDPGHRKDLKKETTEG-------------KYDVLLTTF 472
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ V+ D+ FLS+ W YTI+DE R+KN S L V+ ++ RLL+TGTP+QN+L E
Sbjct: 473 EYVIKDKNFLSKTSWLYTIVDEGHRMKNSGSRLCVVMNTYYKSKYRLLLTGTPLQNSLPE 532
Query: 217 LWALMHFCMPSVF---GTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
LW+L++F +P +F G+ +++ + V + L +L F+LRR
Sbjct: 533 LWSLLNFVLPKIFCSGGSFDEWFNAPLMHVGEKIELNEEEELLIIKRLHKVLRPFLLRRL 592
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILR---------KELPKLLALSSRTA 318
K K VE G LP E + LQK +Y + K+L + +
Sbjct: 593 K-KDVEAG---LPDKVETIIKCGMSQLQKSLYNEVRSTTLKKNDSVKKLNNTIMQLRKIC 648
Query: 319 NHQSLQNT-----------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH + +T SGK +L +L KL +GH+VL+F QMTQ + I+
Sbjct: 649 NHPFVFDTVEEFVNPLKINNELLYKVSGKFELLRRMLYKLRATGHKVLMFFQMTQIMTIM 708
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D L + + Y RLDG++++EER + I F+ ++ VF++STRAGG+
Sbjct: 709 EDMLVMEGFKYLRLDGAVKSEERASLISSFNDPTS-----------GYPVFLLSTRAGGL 757
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
GLNL ADTVI ++ DWNP D+QA RAHRIGQ V L+T TVEE I+ +A K
Sbjct: 758 GLNLQIADTVIIFDSDWNPHADQQAQDRAHRIGQTKEVRIYRLITADTVEEYILEKANHK 817
Query: 482 LRLSHNVV 489
L + ++
Sbjct: 818 LHVDEKII 825
>gi|367050780|ref|XP_003655769.1| SNF21-like protein [Thielavia terrestris NRRL 8126]
gi|347003033|gb|AEO69433.1| SNF21-like protein [Thielavia terrestris NRRL 8126]
Length = 1449
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 278/535 (51%), Gaps = 79/535 (14%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
+ A V LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS ++YL +
Sbjct: 539 TEQASILVGGTLKEYQLKGLQWMLSLYNNNLNGILADEMGLGKTIQTISLITYLIEKKHQ 598
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+LV+ PLS W E K+ P + + Y G N R+ E +++
Sbjct: 599 NGPYLVIVPLSTLTNWNLEFDKWAPSVAKVVYKGPP----NARKMQQEKIRQGK------ 648
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY+ ++ D+ LS+I W + IIDE R+KN +S L +++++ RL++
Sbjct: 649 ---FQVLLTTYEYIIKDRPLLSKIKWFHMIIDEGHRMKNTNSKLSATIQQYYSTRFRLIL 705
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNL+ELWA+++F +P++F + F F ++ + ++ E+
Sbjct: 706 TGTPLQNNLAELWAMLNFVLPNIFKSAKTFDEWFNTPFANTGGQDKMELTEEEQILVIRR 765
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKE-------- 306
L +L F+LRR K+ + + LP TE + LQ ++Y ++ +
Sbjct: 766 LHKVLRPFLLRRLKKDVEKD----LPDKTEKVIKCKFSALQARLYKQMVTHQKIAVSDGK 821
Query: 307 --------LPKLLALSSRTANH-------QSLQNTA----------SGKLVVLDLLLKKL 341
L ++ + NH ++ N A +GK +LD +L K
Sbjct: 822 GGKTGARGLSNMIMQLRKLCNHPFVFDEVENQMNPANVSNDLLWRTAGKFELLDRILPKY 881
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+GHRVL+F QMT +DI++DFL R Y RLDG+ ++E+R ++ F+ +
Sbjct: 882 KATGHRVLMFFQMTAIMDIMEDFLRYRGIQYLRLDGTTKSEDRSDLLKEFNRSDS----- 936
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
F+F++STRAGG+GLNL ADTVI Y+ DWNP D QA RAHRIGQ N V
Sbjct: 937 ------PYFMFLLSTRAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKNEVRI 990
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVV-------GDDVVDREVKERTAVETDDL 509
+ L++ +VEE I+ RA KL + V+ DR+ RT +ET D+
Sbjct: 991 LRLISSASVEEKILERARFKLDMDGKVIQAGRFDNKSSETDRDAMLRTLLETADM 1045
>gi|145515018|ref|XP_001443414.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410792|emb|CAK76017.1| unnamed protein product [Paramecium tetraurelia]
Length = 1024
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 176/513 (34%), Positives = 280/513 (54%), Gaps = 75/513 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q++GL WL+ Y +N +L DEMGLGKT+Q IS L YL + + GP+ ++ P
Sbjct: 358 GQLKQYQLQGLDWLVSLYNNNLNGILADEMGLGKTIQTISLLCYLIEIKKNFGPYFIIVP 417
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +E K+ P ++ + Y G + R+ I + M +++ LT
Sbjct: 418 LSTLSNWSNEFEKWAPSIKKITYKGSPQIRKEISKQM-------------RTTKWNICLT 464
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ VL D+ LS+ W Y I+DE R+KN S +L + + RRLL+TGTP+QNN+
Sbjct: 465 TYEYVLKDKLTLSKYEWKYIIVDEGHRMKNSRSKFAMILGQQYQSERRLLLTGTPLQNNI 524
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRG-KIKEQ-----FTSLKGILSAF 268
+ELWAL++F +P VF + F F+ ++ A ++ ++ E+ L +L F
Sbjct: 525 AELWALLNFLLPKVFSSCEDFEKWFQTPLNIMGASEKDIQLDEEEQLLIINRLHQVLRPF 584
Query: 269 MLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQS 322
+LRR K+ + + LP TE ++ QKK+Y I ++ + S ++ + Q+
Sbjct: 585 LLRRVKKDVEK----ELPRKTEYVIKIKLSAWQKKIYDQINQRGVMTFDQQSGKSGS-QA 639
Query: 323 LQN-----------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
LQN +SGK +LD ++ KL HR+L+F+Q
Sbjct: 640 LQNLMMQLRKICNHPYLFMLNLDMNRVTDEIWRSSGKFELLDRIIPKLLYFKHRLLIFSQ 699
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MTQ +DI++ F E R + Y RLDGS ++E+R + I+ F+ +++I Y+ +F+
Sbjct: 700 MTQLMDIMEAFFEYRGWRYLRLDGSTKSEDRESRIQLFNQENSI---YN--------IFL 748
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+GLNL +ADTV+ ++ DWNP +D QA RA+RIGQ N V + L+T +E
Sbjct: 749 LSTRAGGLGLNLQSADTVVLFDSDWNPMMDLQAQDRAYRIGQKNEVRVLRLITATQIEGN 808
Query: 474 IMRRAERKLRLSHNVV-----GDDVVDREVKER 501
I+ +AE K+ L ++ D+E +ER
Sbjct: 809 ILSKAEHKMGLDAVIIQAGLYNQRSTDQERRER 841
>gi|409050962|gb|EKM60438.1| hypothetical protein PHACADRAFT_179732 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1448
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 264/502 (52%), Gaps = 73/502 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS +++L + GP+LV+
Sbjct: 575 IGGTLKDYQLKGLQWMVSLYNNKLNGILADEMGLGKTIQTISLVAFLIEVKKQRGPYLVI 634
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E AK+ P + + Y G QRR ++ + + F VL
Sbjct: 635 VPLSTMTNWSGEFAKWAPGVRAISYKGNPTQRRALQ-------------NEIRGGQFQVL 681
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS++ W + IIDE R+KN S L L +H+ RL++TGTP+QN
Sbjct: 682 LTTYEYIIKDRPVLSRMKWVHMIIDEGHRMKNTQSKLSQTLTQHYHSRYRLILTGTPLQN 741
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELW+L++F +P +F ++ F F +S + ++ E+ L +L
Sbjct: 742 NLPELWSLLNFVLPKIFNSVKSFDEWFNTPFANSGTGDKIELNEEEALLIIRRLHKVLRP 801
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASI------------------- 302
F+LRR K K VE LP E ++ LQ ++Y +
Sbjct: 802 FLLRRLK-KDVES---ELPDKVEKVIKVKMSALQSQLYKQMKKYKMIADGKDNKGKPGGV 857
Query: 303 --LRKELPKLLALSSRTANHQSLQNT-------------ASGKLVVLDLLLKKLYNSGHR 347
L EL +L + +S+++ SGK+ +L +L K + + HR
Sbjct: 858 KGLSNELMQLRKICQHPFLFESVEDNVNPSGYVNDLIFRTSGKIELLSRILPKFFATDHR 917
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F QMT+ +DI++DFL++ + Y RLDG + E+R + F+ A G+
Sbjct: 918 VLIFFQMTKVMDIMEDFLKMMNWKYLRLDGGTKTEDRAGHVALFN-----------AEGS 966
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
D VF++STRAGG+GLNL +ADTV+ ++ DWNP D QA RAHRIGQ V + +TE
Sbjct: 967 DYKVFILSTRAGGLGLNLQSADTVVIFDSDWNPHADLQAQDRAHRIGQTKVVRILRFITE 1026
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
+VEE + RA KL + V+
Sbjct: 1027 KSVEEAMFARARYKLDIDDKVI 1048
>gi|167539947|ref|XP_001741453.1| chromodomain helicase hrp1 [Entamoeba dispar SAW760]
gi|165893990|gb|EDR22091.1| chromodomain helicase hrp1, putative [Entamoeba dispar SAW760]
Length = 1249
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 197/587 (33%), Positives = 306/587 (52%), Gaps = 85/587 (14%)
Query: 19 ERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSY 78
+R Q V++ + L+ +Q+EG +WL+ + G +L DEMGLGKT+Q +SFL +
Sbjct: 284 KRVWQKKVESPNYKHGNTLRSYQLEGHNWLVFNWCRGKGCILADEMGLGKTVQVVSFLEH 343
Query: 79 LKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ 138
L Q GPFL++ PLS+ + W E+ ++T + V+ Y G + R+ ++ + + Q
Sbjct: 344 LYSFQKLQGPFLIVVPLSMIEHWHREILEWT-DMNVVIYHGSKGNRQLVKHYEWYYKDFQ 402
Query: 139 SQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFL 198
++ L F VLLTTY++V+ D LS+I W T++DEA RLKN S L L +
Sbjct: 403 GKLI-PGHLKFHVLLTTYEIVISDWEDLSKISWLVTVVDEAHRLKNKDSKLLKALC-NIQ 460
Query: 199 MPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF 258
++L+TGTPIQNNL ELW L+++ P F +L +F F S+ EQ
Sbjct: 461 TNHKVLLTGTPIQNNLGELWTLLNYIEPKTFSSLEEFDHEFNSLDKSA---------EQV 511
Query: 259 TSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRK------- 305
L+ + F LRR K ++ + +PP E+T++QK+ Y ++ K
Sbjct: 512 NKLQESIKPFFLRRMKNEVEKS----IPPKEETIIEVELTMVQKQYYRALYEKNREFLNK 567
Query: 306 --------ELPKLLALSSRTANHQSL------QNTA----------------SGKLVVLD 335
L L+ + NH L ++TA SGKLV+LD
Sbjct: 568 GCVGSNVPNLQNLMMQLRKVCNHPYLIPGVEEKDTAQFPEGSPDYFNQLIRSSGKLVLLD 627
Query: 336 LLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQS 395
LL KLY H+VL+F+Q+ + L+I++ +L+ + Y YERLDGSI++E+R Q+
Sbjct: 628 KLLPKLYADHHKVLIFSQLKKVLNIIEKYLKYKGYFYERLDGSIKSEDR---------QN 678
Query: 396 AIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQ 455
AI+R + + F+F++ TRAGG G+NL ADTVI Y+ DWNPQ D QA R HRIGQ
Sbjct: 679 AIDRFMNPEM--NRFIFLLCTRAGGFGINLSEADTVIIYDSDWNPQNDLQAQARCHRIGQ 736
Query: 456 MNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGD-----DVVDREVKERTAVETDDLR 510
V LV+++T E + RA KL L V+ + D D++ + +E+ LR
Sbjct: 737 KKEVKVYRLVSKNTYERYMFERASMKLGLDQAVLANITTSSDPKDKQQPSKELIES-LLR 795
Query: 511 SIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAG 557
+ +G A ++E + + +E+++ R +V K G
Sbjct: 796 NGAYG-------AFKDDEESSSKFCEED--IEQILEKRSSKVVWKGG 833
>gi|195496271|ref|XP_002095622.1| GE19602 [Drosophila yakuba]
gi|194181723|gb|EDW95334.1| GE19602 [Drosophila yakuba]
Length = 899
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 182/496 (36%), Positives = 261/496 (52%), Gaps = 68/496 (13%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L P Q+EG+SWL + G+ +L DEMGLGKT+Q + FL L GPFL+ PL
Sbjct: 267 KLHPFQMEGVSWLRYNWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPL 326
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRT--MYEHVKEQSQMSNVSPLPFDVLL 153
S W E+ + P+ + YVG + R IR+ + V ++ + + F+V+L
Sbjct: 327 STVANWERELELWAPEFYCITYVGGKTSRAVIRKNELSCKEVTTKTMRAKQTEYKFNVML 386
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y+++ +D FL I W ++DEA RLKN S + +L ++ ++ +LL+TGTP+QNN
Sbjct: 387 TSYELISLDVAFLGSIDWAVLVVDEAHRLKNNQSKFFRMLNKYRIV-YKLLLTGTPLQNN 445
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L EL+ L++F F L F + F D +EQ L IL+ MLRR
Sbjct: 446 LEELFYLLNFLSSDKFDDLQTFQAKFADVAK----------EEQVKRLHEILAPHMLRRL 495
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKL--------------LAL 313
K +++ +P E V +QKK Y IL K L +
Sbjct: 496 KADVLK----NMPSKAEFIVRVELSSMQKKFYKLILTKNFKALNKNGGGRVCSLLNIMMD 551
Query: 314 SSRTANHQSLQNT--------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
+ NH L ++ ASGKL +L +LK+L HRVL+F+Q
Sbjct: 552 LRKCCNHPYLFSSAAEEATILPSGLYEINSLIKASGKLDLLSKMLKQLKADHHRVLIFSQ 611
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MT+ L+IL+DFLE Y YERLDG+IR + R AI F+ A + FVF+
Sbjct: 612 MTKMLNILEDFLEGEGYQYERLDGNIRGDLRQEAIDRFNAPKA-----------EQFVFL 660
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL ADTVI ++ DWNP D QA RAHR+GQ V+ VT ++VEE
Sbjct: 661 LSTRAGGLGINLATADTVILFDSDWNPHNDVQAFSRAHRMGQTKKVMIYRFVTHNSVEER 720
Query: 474 IMRRAERKLRLSHNVV 489
IM+ + K+ L+H VV
Sbjct: 721 IMQVVKHKMMLTHLVV 736
>gi|356538178|ref|XP_003537581.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
Length = 757
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 300/548 (54%), Gaps = 77/548 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q++G+ WLI + G+N +L D+MGLGKT+Q I FLS+LK + GP++++ P
Sbjct: 184 GKLKTYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKAKGLD-GPYMIIAP 242
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS WV+E+++F P L + Y G+++QR IRR +H+ ++ + P F +++T
Sbjct: 243 LSTLSNWVNEISRFAPSLPAVIYHGDKKQRDEIRR---KHMPTRT----IGP-EFPIVIT 294
Query: 155 TYDVVLMD-QGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFL-MPRRLLMTGTPIQN 212
+Y++ L D + + W Y ++DE RLKN L L+ F+ + +LL+TGTP+QN
Sbjct: 295 SYEIALNDAKKYFRSYNWKYIVVDEGHRLKNSQCKLVKALK--FINVENKLLLTGTPLQN 352
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTS-----LKGILSA 267
NL+ELW+L++F +P +F +L +F S F + ++ + +++E+ S L IL
Sbjct: 353 NLAELWSLLNFILPDIFASLEEFESWFNLSGKCNNEATKEELEEKRRSQVVAKLHAILRP 412
Query: 268 FMLRRTKQKLVECGHLMLPPLTEITV--------------LQKKVYASILRKELPKLLAL 313
F+LRR K + +MLP EI + L K + L++ + L++
Sbjct: 413 FLLRRMKSDV----EIMLPRKKEIIIYANMTEHQKNLQDHLVNKTLGNYLKENMSSGLSV 468
Query: 314 SS-----------RTANHQSLQNTA----------------SGKLVVLDLLLKKLYNSGH 346
+ + NH L +A GK +LD LL++L++ H
Sbjct: 469 PAIMIRNLAIQLRKVCNHPDLLESAFDDSYLYPPLEEIVGQCGKFHLLDRLLQRLFSRNH 528
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
+VL+F+Q T+ LDI+ + + ++ R+DGS++ EER I+ F+ ++
Sbjct: 529 KVLIFSQWTKVLDIMDYYFSEKGFAVCRIDGSVKLEERKQQIQDFNDVNS---------- 578
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+ VF++STRAGG+G+NL ADT I Y+ DWNPQ+D QA+ R HRIGQ V L T
Sbjct: 579 -NCRVFLLSTRAGGLGINLTVADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLST 637
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTA---VETDDLRSIIFGLHLFDPKA 523
++E +++RA KL+L H V+ +E + + +E DD+ +++ + K
Sbjct: 638 AQSIEGRMLKRAFSKLKLEHVVIEKGQFHQERTKPASMDEIEEDDVLALLRDEETAEDKK 697
Query: 524 INNEESDD 531
I+ + SD+
Sbjct: 698 IHTDISDE 705
>gi|313247391|emb|CBY15642.1| unnamed protein product [Oikopleura dioica]
Length = 1498
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 190/506 (37%), Positives = 278/506 (54%), Gaps = 64/506 (12%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L +Q+EGL+WL + NV+L DEMGLGKT+Q+ F+ L S GPFL+ PLS
Sbjct: 401 LHEYQLEGLNWLRFSWSQDTNVILADEMGLGKTIQSAVFIRSLMMENNSKGPFLISVPLS 460
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E + P+L V+ Y G+ + R IR ++++ + F VLLT+Y
Sbjct: 461 TLPNWEREFELWAPELYVVSYHGDGKSRAVIR---------ENELRDGCQTKFHVLLTSY 511
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V MD L I W IIDEA RLK+ S+ + VL + + ++L+TGTP+QNNL E
Sbjct: 512 EMVSMDNALLQSIDWACLIIDEAHRLKSNRSLFFKVLSA-YNVAHKVLLTGTPLQNNLEE 570
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
L+ L++F +P F L FL F AV S ++Q L +L A MLRR K
Sbjct: 571 LFYLLNFLVPEKFTDLQSFLDDF--AVISK--------EDQVKKLHDLLGAHMLRRLKAD 620
Query: 277 LVEC--GHLMLPPLTEITVLQKKVYASILRKE-----------LPKLLALSSRTANHQSL 323
+++ G + + T +T +QKK Y +L + L +L + NH L
Sbjct: 621 VLKGMKGKVEMIVRTGLTAMQKKYYKFVLTRNYEALKVKSGTSLTNVLMELKKICNHPYL 680
Query: 324 QNTAS--------------------GKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQD 363
+ S GKL+++ +LKKL GHRVL+F+QMT+ LD+L+D
Sbjct: 681 NDKCSESAARLSNNAFEGSELTANCGKLLLMQKMLKKLKEQGHRVLIFSQMTKLLDLLED 740
Query: 364 FLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGL 423
+LE +Y YER+DGS+ +IR Q AI+R G+++F+F++STRAGG+G+
Sbjct: 741 YLEYEQYKYERIDGSVTG-----SIR----QQAIDRF--NKPGSESFIFLLSTRAGGLGI 789
Query: 424 NLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLR 483
NL ADTVI Y+ DWNP D QA RAHRIGQ N VL VT+++VEE + + A++K+
Sbjct: 790 NLATADTVIIYDSDWNPHNDIQAFSRAHRIGQKNKVLIYRFVTQNSVEERVAQVAKKKMM 849
Query: 484 LSHNVVGDDVVDREVKERTAVETDDL 509
L+H V+ + + + E DD+
Sbjct: 850 LNHLVIRPGIGQKNNAAISKNEMDDI 875
>gi|356495411|ref|XP_003516571.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
Length = 943
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 300/548 (54%), Gaps = 77/548 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q++G+ WLI + G+N +L D+MGLGKT+Q I FLS+LK + GP++++ P
Sbjct: 370 GKLKNYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKAKGLD-GPYMIIAP 428
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS WV+E+++F P L + Y G+++QR +IRR +H+ ++ + P F +++T
Sbjct: 429 LSTLSNWVNEISRFAPSLPAVIYHGDKKQRDDIRR---KHMPTRT----IGP-QFPIVIT 480
Query: 155 TYDVVLMD-QGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFL-MPRRLLMTGTPIQN 212
+Y++ L D + + W Y ++DE RLKN L L+ F+ + +LL+TGTP+QN
Sbjct: 481 SYEIALNDAKKYFRSYNWKYLVVDEGHRLKNSQCKLVKALK--FINVENKLLLTGTPLQN 538
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTS-----LKGILSA 267
NL+ELW+L++F +P +F +L +F S F + S++ + +++E+ S L IL
Sbjct: 539 NLAELWSLLNFILPDIFASLEEFESWFNLSGKSNNGATKEELEEKRRSQVVAKLHAILRP 598
Query: 268 FMLRRTKQKLVECGHLMLPPLTEITVL------QKKVYASILRKELPKLLA--LSS---- 315
F+LRR K + +MLP EI + QK + ++ K L L +SS
Sbjct: 599 FLLRRMKSDV----EIMLPRKKEIIIYANMTEHQKNLQDHLVNKTLGNYLKENMSSGRSV 654
Query: 316 -------------RTANHQSLQNTA----------------SGKLVVLDLLLKKLYNSGH 346
+ NH L +A GK +LD LL++L+ H
Sbjct: 655 PAGMIRNLAIQLRKVCNHPDLLESAFDDSYLYPPLEEIVGQCGKFHLLDRLLQRLFARNH 714
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
+VL+F+Q T+ LDI+ + + + R+DG ++ +ER I+ F+ ++ R
Sbjct: 715 KVLIFSQWTKVLDIMDYYFSEKGFEVCRIDGGVKLDERKQQIQDFNDVNSNCR------- 767
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
VF++STRAGG+G+NL AADT I Y+ DWNPQ+D QA+ R HRIGQ V L T
Sbjct: 768 ----VFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLST 823
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTA---VETDDLRSIIFGLHLFDPKA 523
++E +++RA KL+L H V+ +E + + +E DD+ +++ + K
Sbjct: 824 AQSIEGRMLKRAFSKLKLEHVVIEKGQFHQERTKPASMDEIEEDDVLALLRDEETAEDKM 883
Query: 524 INNEESDD 531
I+ + SD+
Sbjct: 884 IHTDISDE 891
>gi|449550384|gb|EMD41348.1| hypothetical protein CERSUDRAFT_109939 [Ceriporiopsis subvermispora
B]
Length = 1398
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 264/502 (52%), Gaps = 73/502 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS +++L + GP+LV+
Sbjct: 530 VGGTLKDYQIKGLQWMVSLYNNKLNGILADEMGLGKTIQTISLITFLIEVKKQRGPYLVI 589
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E AK+ P + ++ Y G QR+ +++ + F VL
Sbjct: 590 VPLSTMTNWSGEFAKWAPGVNMVSYKGNPAQRKLLQQDLRTGQ-------------FQVL 636
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS+I W + IIDE R+KN S L L +++ RL++TGTP+QN
Sbjct: 637 LTTYEYIIKDRAHLSRIRWVHMIIDEGHRMKNTQSKLAQTLTQYYHSRYRLILTGTPLQN 696
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELWAL++F +P +F ++ F F +S + ++ E+ L +L
Sbjct: 697 NLPELWALLNFVLPKIFNSVKSFDEWFNTPFANSGTGDKIELNEEEALLIIRRLHKVLRP 756
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASI------------------- 302
F+LRR K K VE LP E ++ LQ ++Y +
Sbjct: 757 FLLRRLK-KDVES---ELPDKVEKVIKIRMSALQSQLYKQMKKYKMIADGKDSKGKPGGV 812
Query: 303 --LRKELPKLLALSSRTANHQSLQNT-------------ASGKLVVLDLLLKKLYNSGHR 347
L EL +L + +S+++ SGK+ +L +L K + + HR
Sbjct: 813 KGLSNELMQLRKICQHPYLFESVEDKINPSGIIDDKLIRTSGKIELLSRILPKFFATDHR 872
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F QMT+ +DI++DFL++ + Y RLDG + E+R + F+ +++
Sbjct: 873 VLIFFQMTKVMDIMEDFLKMMGWKYLRLDGGTKTEDRAGHVAQFNAKNS----------- 921
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
D VF++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ V + +TE
Sbjct: 922 DIRVFILSTRAGGLGLNLQTADTVIIFDSDWNPHADLQAQDRAHRIGQTKVVRILRFITE 981
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
+VEE + RA KL + V+
Sbjct: 982 KSVEEAMFARARYKLDIDDKVI 1003
>gi|145494324|ref|XP_001433156.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400273|emb|CAK65759.1| unnamed protein product [Paramecium tetraurelia]
Length = 1030
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/496 (34%), Positives = 273/496 (55%), Gaps = 70/496 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +QV+GL WL+ Y +N +L DEMGLGKT+Q IS L YL ++ + GPF ++ P
Sbjct: 361 GQLKQYQVQGLDWLVSLYNNSLNGILADEMGLGKTIQTISLLCYLIETKKNFGPFFIIVP 420
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +E K+ P ++ + Y G + R+ I + M + +++ LT
Sbjct: 421 LSTLSNWANEFEKWAPSIKKVIYKGSPQVRKEISKQMRTTI-------------WNICLT 467
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ VL D+ L++ W Y I+DE R+KN S +L + + RRLL+TGTP+QNN+
Sbjct: 468 TYEYVLKDRLALAKYEWKYIIVDEGHRMKNSRSKFAMILGQQYQSERRLLLTGTPLQNNI 527
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSA-PKRGKIKEQ-----FTSLKGILSAF 268
+ELWAL++F +P VF + + F F+ + K ++ E+ L +L F
Sbjct: 528 AELWALLNFLLPKVFSSCDDFEKWFQMPLSKMGVNEKDCQLDEEEQLLIINRLHQVLRPF 587
Query: 269 MLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQS 322
+LRR K+ + + LP TE ++ QKK+Y I ++ + S ++ + Q+
Sbjct: 588 LLRRVKKDVEK----ELPRKTEYVIKIKLSAWQKKIYDQINQRGVMTFDQQSGKSGS-QA 642
Query: 323 LQN-----------------------------TASGKLVVLDLLLKKLYNSGHRVLLFAQ 353
LQN +SGK +LD ++ KL HR+L+F+Q
Sbjct: 643 LQNLMMQLRKICNHPYLFMLNLDMNRITDEIWRSSGKFELLDRIIPKLLYFKHRLLIFSQ 702
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MTQ +DI++ + E R + Y RLDGS ++E+R I+ F+ +++I Y+ +F+
Sbjct: 703 MTQLMDIMEAYFEYRGWRYLRLDGSTKSEDRETRIKLFNQENSI---YN--------IFL 751
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+GLNL +ADTV+ ++ DWNP +D QA RA+RIGQ N V + L+T +E
Sbjct: 752 LSTRAGGLGLNLQSADTVVLFDSDWNPMMDLQAQDRAYRIGQKNEVRVLRLITATQIEGN 811
Query: 474 IMRRAERKLRLSHNVV 489
I+ +AE K+ L ++
Sbjct: 812 ILSKAEHKMGLDAIII 827
>gi|300121547|emb|CBK22066.2| unnamed protein product [Blastocystis hominis]
Length = 787
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 184/506 (36%), Positives = 266/506 (52%), Gaps = 88/506 (17%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
+L+P+QVEG++W++ + N +L DEMGLGKT+Q+ F+ + + PFL++ PL
Sbjct: 165 QLRPYQVEGVNWMLWNWFNNRNSILADEMGLGKTVQSTLFIQQILHRYKTKPPFLIVAPL 224
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W +E+A++T L V+ + G E RR I++ YE ++ + FD+LLTT
Sbjct: 225 STLPHWEAEIARWT-DLHVVVFHGRVESRRIIKQ--YEWKSQEGE--------FDILLTT 273
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
+ + + + LS I W ++DEA RLK ++ L +VL++ +LL+TGTP+QNN
Sbjct: 274 FQICIAEAAALSSISWAGLVVDEAHRLKGKNNKLGDVLKK-IDFGCKLLLTGTPLQNNTE 332
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELW L++F P F QF + F D K+ Q L +L MLRR K+
Sbjct: 333 ELWILLNFLQPERFHDAEQFQADFGDM----------KVAAQLEKLHTLLKPLMLRRMKE 382
Query: 276 KLVECGHLMLPPL------TEITVLQKKVYASIL------------RKELPKLLALS--- 314
+ + L P E+T +QKK Y ++ K LP L+ ++
Sbjct: 383 DVEKS----LKPKEETVINVEMTAMQKKFYRAVYDHNTSVRSVSTDSKNLPSLMNITMEL 438
Query: 315 SRTANHQSL----QNT--------------------------ASGKLVVLDLLLKKLYNS 344
+ NH L ++T ASGK+VVLD LL KL
Sbjct: 439 RKCCNHPFLIRGAESTVIEEICAVYPFRSSLAPELALKYITYASGKMVVLDKLLPKLRAQ 498
Query: 345 GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEA 404
GHRVLLF+QM L+I+QD+L ++ Y +ER+DG ++ +R AAI FS
Sbjct: 499 GHRVLLFSQMVNMLNIIQDYLSMKGYPFERIDGGVKISDRQAAIDRFSTP---------- 548
Query: 405 GGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINL 464
G+D F+F+I TRAGGVG+NL AADTVI Y+ DWNPQ D QA R HRIGQ V L
Sbjct: 549 -GSDRFIFLICTRAGGVGINLTAADTVIIYDSDWNPQNDIQAQARCHRIGQDKAVKVYRL 607
Query: 465 VTEHTVEEVIMRRAERKLRLSHNVVG 490
+T T E + ++A KL L V+
Sbjct: 608 ITNRTYEMEMFQKANMKLGLDKAVLN 633
>gi|393247485|gb|EJD54992.1| hypothetical protein AURDEDRAFT_147677 [Auricularia delicata
TFB-10046 SS5]
Length = 1411
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 282/550 (51%), Gaps = 86/550 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +LK +Q++GL W++ Y +N +L DEMGLGKT+Q IS +++L + PGP+LV+
Sbjct: 555 VGGKLKDYQLKGLQWMVSLYNNRLNGILADEMGLGKTIQTISLVTFLIEVKRQPGPYLVI 614
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P ++ + Y G +RRT+ ++ F VL
Sbjct: 615 VPLSTLTNWTLEFQKWAPSVKTISYKGSPA----VRRTLQNDIRMGQ---------FQVL 661
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS++ W + IIDE R+KN S L L +++ RL++TGTP+QN
Sbjct: 662 LTTYEYIIKDRPVLSKMRWVHMIIDEGHRMKNTQSKLSQTLGQYYHSRYRLILTGTPLQN 721
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELW+L++F +P VF + F F ++ + ++ E+ L +L
Sbjct: 722 NLPELWSLLNFVLPKVFNSAQSFDEWFNTPFANTGGQDKIELNEEEALLIIRRLHKVLRP 781
Query: 268 FMLRRTK-----------QKLVECGHLMLPPLTEITVLQKKVYASI-------------- 302
F+LRR K +K+++C +++ LQ ++Y +
Sbjct: 782 FLLRRLKKDVESELPDKVEKVIKC---------KLSALQTQLYKQMKKHGMLFAEGKDAK 832
Query: 303 ---------------LRK--ELPKLLALSSRTANHQSLQNT----ASGKLVVLDLLLKKL 341
LRK + P L + N L + +SGK+ +L +L KL
Sbjct: 833 GKQLGLKGLNNALMQLRKICQHPYLFEEVEQKINPSGLIDDKIIRSSGKVELLSRILPKL 892
Query: 342 YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLY 401
+ +GHRVL+F QMT+ +DI+ DF+ Y + RLDGS + +ER + ++ F+ + +
Sbjct: 893 FATGHRVLIFFQMTKVMDIMSDFMNFMGYKHLRLDGSTKTDERASYVQLFNAKDS----- 947
Query: 402 SEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLS 461
+ VF++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ V
Sbjct: 948 ------EYQVFLLSTRAGGLGLNLQTADTVIIFDSDWNPHADLQAQDRAHRIGQTKAVRI 1001
Query: 462 INLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDP 521
+ +TE +VEE + RA KL + V+ D + ++ E LRSI+ D
Sbjct: 1002 LRFITEKSVEEAMFARARFKLAIDGKVIQAGKFDNKSTDKEQEEV--LRSILEADQEQDE 1059
Query: 522 KAINNEESDD 531
N E +D+
Sbjct: 1060 SEENAEMTDE 1069
>gi|66359910|ref|XP_627133.1| brahma like protein with a HSA domain, SNF2 like helicase and a bromo
domain [Cryptosporidium parvum Iowa II]
gi|46228555|gb|EAK89425.1| brahma like protein with a HSA domain, SNF2 like helicase and a bromo
domain [Cryptosporidium parvum Iowa II]
Length = 1673
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 179/485 (36%), Positives = 268/485 (55%), Gaps = 63/485 (12%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q++GL WL+ Y +N +L D MGLGKT+Q +S L+++ ++ + GP L++ P
Sbjct: 743 GQLREYQMKGLEWLVSLYNNNLNGILADAMGLGKTVQTVSVLAHIYENKGNRGPHLIIAP 802
Query: 95 LSVTDG-WVSEMAKFTPKLEVLRYVGEREQRRNIR-RTMYEHVKEQSQMSNVSPLPFDVL 152
LS G W +E ++ P + Y G +E R+ IR + M K F VL
Sbjct: 803 LSTLHGNWENEFNRWLPDFVKVIYEGNKEIRKQIRSKYMTGEAK------------FHVL 850
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTT ++ D+ +L + W Y I+DEA RLKNP S L +L F RL +TGTP+QN
Sbjct: 851 LTTDAFIMKDKHYLRKFDWEYIIVDEAHRLKNPKSKLVQILNNGFRAKHRLALTGTPLQN 910
Query: 213 NLSELWALMHFCMPSVFGT-------LNQFLSTFKDAVHSSSAPKRGKI------KEQF- 258
+L E+WAL+++ MPS+F + N+ LS+ K + + G + +EQ
Sbjct: 911 DLQEVWALLNYLMPSIFNSSETFQQWFNEPLSSIKSSGKTGGGSDNGIVPLDISEEEQLL 970
Query: 259 --TSLKGILSAFMLRRTKQKLVECGHLMLPPLTEI-----TVLQKKVYASILRKEL--PK 309
L +L F+LRR K ++ + + P L EI + LQ+ +Y + E P
Sbjct: 971 IVDRLHKVLRPFLLRREK---IQVANEVPPKLEEILWCPLSGLQQYLYKELESNENSGPN 1027
Query: 310 LLALSSRTANHQSLQNT------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+L + NH L +T GK V+LD +L KL +GHRVL+F+QMT+
Sbjct: 1028 VLMQLRKVCNHPFLFSTEIQYPSDESIVRVCGKFVMLDSILPKLRAAGHRVLIFSQMTKL 1087
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
L +L+ FL LR + RLDG+ +E+R +++ F+ +++ FVF++ST+
Sbjct: 1088 LTLLEVFLSLRNMPFLRLDGTTLSEDRQESLKLFNAENS-----------PYFVFLLSTK 1136
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG G+NL +ADTVI ++ DWNPQ D+QA RAHRIGQ VL++ VT TVEE IM
Sbjct: 1137 AGGFGINLQSADTVILFDSDWNPQNDEQAQSRAHRIGQKKEVLTLRFVTPDTVEERIMTT 1196
Query: 478 AERKL 482
A KL
Sbjct: 1197 AGIKL 1201
>gi|378755038|gb|EHY65065.1| chromatin structure-remodeling complex subunit snf21 [Nematocida
sp. 1 ERTm2]
Length = 992
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/488 (35%), Positives = 260/488 (53%), Gaps = 63/488 (12%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++G+ W++ Y +N +L DEMGLGKT+QAI F+ Y+ + PFLV+ PLS
Sbjct: 323 LREYQLKGVEWMVSLYNNNLNGILADEMGLGKTVQAIVFICYILEKKQETDPFLVIVPLS 382
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W SE +++ P + VL Y G+ R+++++ S +DVLLTT+
Sbjct: 383 TFSNWQSEFSRWAPSIRVLSYKGDPTHRKDLKK-------------ETSEGKYDVLLTTF 429
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ ++ D+ FLS+ W YTI+DE R+KN S L V+ ++ RLL+TGTP+QN+L E
Sbjct: 430 EYIIKDKNFLSKTNWLYTIVDEGHRMKNSGSRLCVVMNTYYKSRYRLLLTGTPLQNSLPE 489
Query: 217 LWALMHFCMPSVF---GTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
LW+L++F +P +F G+ +++ + V + L +L F+LRR
Sbjct: 490 LWSLLNFVLPKIFCSGGSFDEWFNAPLMHVGEKIELNEEEELLIIKRLHKVLRPFLLRRL 549
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILR---------KELPKLLALSSRTA 318
K K VE G LP E + LQ+ +Y + K+L + +
Sbjct: 550 K-KDVEAG---LPDKVETIIKCGMSHLQRSLYNEVRSTTLKKNDSVKKLNNTIMQLRKIC 605
Query: 319 NH-----------------QSLQNTASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDIL 361
NH L SGK +L +L KL +GH+VL+F QMTQ + I+
Sbjct: 606 NHPFVFDAVEDFVNPLKINNELLYKVSGKFELLRRMLYKLRATGHKVLMFFQMTQIMTIM 665
Query: 362 QDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGV 421
+D L + + Y RLDG++++EER + I F+ ++ VF++STRAGG+
Sbjct: 666 EDMLVMEGFKYLRLDGAVKSEERASLISSFNDPTS-----------GYPVFLLSTRAGGL 714
Query: 422 GLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERK 481
GLNL ADTVI ++ DWNP D+QA RAHRIGQ V L+T TVEE I+ +A K
Sbjct: 715 GLNLQIADTVIIFDSDWNPHADQQAQDRAHRIGQTKEVRIYRLITADTVEEYILEKANHK 774
Query: 482 LRLSHNVV 489
L + ++
Sbjct: 775 LHVDEKII 782
>gi|398021687|ref|XP_003864006.1| transcription activator [Leishmania donovani]
gi|322502240|emb|CBZ37323.1| transcription activator [Leishmania donovani]
Length = 1103
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/558 (34%), Positives = 288/558 (51%), Gaps = 95/558 (17%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q+EG++WL+ + GVN +L DEMGLGKT Q I+ ++YLKF+ PGP LV+
Sbjct: 162 IRGKLRPYQIEGVNWLLGLFSRGVNGILADEMGLGKTFQTIATIAYLKFTVGMPGPHLVV 221
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP SV W E + P L V ++ + R +I + + + + +DV+
Sbjct: 222 CPKSVMGNWYREFKHWCPGLLVYKFHASSDIRPSIVK---------AHLHPTDRIKYDVI 272
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTT+++VL + +I W Y I+DEA +LKN + L + RL++TGTP+QN
Sbjct: 273 LTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRAHTAL-DSLQTSHRLIITGTPLQN 331
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL+HF P +F F + F ++S + + ++L IL+ M+RR
Sbjct: 332 NLRELWALLHFLAPRLFNDSESFDTWFD----TTSGQQDANV---MSNLHKILAPLMIRR 384
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------LPKLLAL 313
K V G +PP EI V Q++ Y ++L K+ L ++
Sbjct: 385 LKAD-VSTG---IPPKKEIYVSCQLSKKQREWYMNVLAKDAEVLNKAGGSVASLTNVMMS 440
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKL---YNSGHRVLLFAQMT 355
+ NH L + SGK+++LD LL +L H+VL+F+Q T
Sbjct: 441 LRKVINHPYLMDGGEEGPPFVTDEKLVRTSGKMIILDKLLHRLRADVQGKHKVLIFSQFT 500
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
L+IL+D+ +R + Y R+DG+ +R + + F+ S+ D F+F++S
Sbjct: 501 SMLNILEDYCNMRGFMYCRIDGNTSGYDRDSQMASFNSPSS-----------DYFIFLLS 549
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AA+ VI Y+ DWNPQ+D QA RAHRIGQ V VT+ T+EE +
Sbjct: 550 TRAGGLGINLQAANHVILYDSDWNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEEKMY 609
Query: 476 RRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEESDDLRLS 535
RRA +KL L D VV V+ L+S KA N ++L LS
Sbjct: 610 RRALKKLYL------DAVV---------VQQGRLQS----------KATNQASKEEL-LS 643
Query: 536 GLNSMVEKVIAMRHEQVS 553
+ E++ RHE V+
Sbjct: 644 MIKFGAEEIFKTRHEDVT 661
>gi|401427882|ref|XP_003878424.1| putative DNA-dependent ATPase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494672|emb|CBZ29974.1| putative DNA-dependent ATPase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1098
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 205/622 (32%), Positives = 307/622 (49%), Gaps = 109/622 (17%)
Query: 15 HDNDERDGQTPVDAAEFGVT-----AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKT 69
HDN+E T D T +L+P+Q+EG++WL+ + GVN +L DEMGLGKT
Sbjct: 141 HDNEE--DSTGFDMMHLTETPSYIRGKLRPYQIEGVNWLLSLFSRGVNGILADEMGLGKT 198
Query: 70 LQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR 129
Q I+ ++YLKF+ PGP LV+CP SV W E + P L V ++ + R +I +
Sbjct: 199 FQTIATIAYLKFTLGMPGPHLVVCPKSVMGNWYREFKHWCPGLLVYKFHASSDIRPSIVK 258
Query: 130 TMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVL 189
+ + + +DV++TT+++VL + +I W Y I+DEA +LKN
Sbjct: 259 ---------AHLHPTDRIKYDVIVTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRA 309
Query: 190 YNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAP 249
+ L + RL++TGTP+QNNL ELWAL+HF P +F F + F A A
Sbjct: 310 HTAL-DSLHTSHRLIITGTPLQNNLKELWALLHFLAPRLFSDSESFDTWFDTASGQQDA- 367
Query: 250 KRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASIL 303
++L IL+ M+RR K V G +PP EI V Q++ Y ++L
Sbjct: 368 ------NVMSNLHKILAPLMIRRLKAD-VSTG---IPPKKEIYVSCQLSKKQREWYMNVL 417
Query: 304 RKELPKLLALSSRTA-------------NHQSLQNTA---------------SGKLVVLD 335
K+ L A NH L + SGK+++LD
Sbjct: 418 AKDAEVLNKAGGSVASLTNAMMSLRKVINHPYLMDGGEEGPPFVTDEKLVRTSGKMIILD 477
Query: 336 LLLKKL---YNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFS 392
LL +L H+VL+F+Q T L+IL+D+ +R + Y R+DG+ +R + + F+
Sbjct: 478 KLLHRLRADVQGKHKVLIFSQFTSMLNILEDYCNMRGFMYCRIDGNTSGYDRDSQMASFN 537
Query: 393 VQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHR 452
S+ D F+F++STRAGG+G+NL AA+ VI Y+ DWNPQ+D QA RAHR
Sbjct: 538 SPSS-----------DYFIFLLSTRAGGLGINLQAANHVILYDSDWNPQMDLQAQDRAHR 586
Query: 453 IGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSI 512
IGQ V VT+ T+EE + RRA +KL L D VV V+ L+S
Sbjct: 587 IGQKRSVRVYRFVTDGTLEEKMYRRALKKLYL------DAVV---------VQQGRLQS- 630
Query: 513 IFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESD 572
KA N ++L LS + E++ RHE V+ E + LL+E +
Sbjct: 631 ---------KATNQASKEEL-LSMIKFGAEEIFKTRHEDVT-------EADIDRLLDEGE 673
Query: 573 LLMHESFASATSYPDLDEASYR 594
+ ++ + A + AS++
Sbjct: 674 TISNQLTSEAKQQVQMSLASFQ 695
>gi|342179964|emb|CCC89438.1| putative transcription activator [Trypanosoma congolense IL3000]
Length = 1176
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 197/556 (35%), Positives = 286/556 (51%), Gaps = 81/556 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q+EG++WL+ Y +N +L DEMGLGKTLQ I+ L+YLKF+ PGP LV+
Sbjct: 163 IRGKLRPYQIEGVNWLLGLYSRCINGILADEMGLGKTLQTIAALAYLKFTHGLPGPHLVV 222
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRY-----VGEREQRRNIRRTMYEHVKEQSQMSNVSPL 147
CP SV + W E+ + P +VL Y + +R R N+ YE++K
Sbjct: 223 CPASVMENWCLEIRHWCPAFKVLGYHCPSDIRQRFTRENL--MPYENIK----------- 269
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
+D+++TTY++V + + +IPW Y I+DEA +LKN S ++ L + RL++TG
Sbjct: 270 -YDIVVTTYEMVFGELNLMKKIPWQYLIVDEAHKLKNDESRAHSTL-DAVHSNYRLIITG 327
Query: 208 TPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSA 267
TP+QN+L ELWAL+HF P +F + F S F D V + E T++ IL
Sbjct: 328 TPLQNDLRELWALLHFLAPRLFNDSDSFESWF-DTVSGQ------QDSEALTNMHRILLP 380
Query: 268 FMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------L 307
MLRR K + V G +PP EI V LQK++Y +L K+ L
Sbjct: 381 LMLRRLKSE-VGTG---IPPKKEIYVSCKLTKLQKRLYMQVLAKDADVINKNVIGSLKGL 436
Query: 308 PKLLALSSRTANHQSL-QNTASGKLVVLDLLLKKLY-----------------NSGHRVL 349
+L + NH + Q G V D L K N H+VL
Sbjct: 437 SDVLMNMRKVINHPYMMQGVEEGPPFVTDERLVKYSGKMMLLDKLLHRLLRDENEKHKVL 496
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+Q T LDIL+D+ +R + R+DG R + + F+ A +D
Sbjct: 497 IFSQFTTMLDILEDYCTMRGFKICRIDGGTSLYNRNSQMAAFN-----------APNSDR 545
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F+F++STRAGGVG+NL AA+ VI Y+ DWNPQ+D QA RAHRIGQ V +T+ T
Sbjct: 546 FIFLLSTRAGGVGINLQAANHVIIYDSDWNPQMDLQAQDRAHRIGQQRLVRVYRFITDGT 605
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGL-HLFDPKAINNEE 528
+EE + +RA +KL L VV V R + L +I FG +F + + E
Sbjct: 606 LEERMYQRALKKLYLDAMVVQQSRVRRRSGNSDMSREEILSAIRFGAEEIFRARDEDVTE 665
Query: 529 SDDLRLSGLNSMVEKV 544
+D RL +S +V
Sbjct: 666 ADIDRLFDDDSKAREV 681
>gi|167517042|ref|XP_001742862.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779486|gb|EDQ93100.1| predicted protein [Monosiga brevicollis MX1]
Length = 470
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 176/500 (35%), Positives = 269/500 (53%), Gaps = 80/500 (16%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK +Q++GL WL Y G+N +L DEMGLGKT+Q+IS L++L + GPFLV+ P S
Sbjct: 1 LKGYQLKGLRWLANLYEQGINGILADEMGLGKTIQSISTLAHLAEHEGIWGPFLVVTPAS 60
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E+++FTP+L+ L + + ++N + + V T+Y
Sbjct: 61 TLHNWCEEVSRFTPELKAL----------------TAGIGSGAPVANC--MAWQV--TSY 100
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ D + +++ W Y I+DEAQ +K+ +S +N L + F RLL+TGTPIQN ++E
Sbjct: 101 EIVVKDAKYFNRVHWQYMILDEAQAIKSSTSQRWNTLLK-FNCRNRLLLTGTPIQNTMAE 159
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKE-QFTSLKGILSAFMLRRTKQ 275
LWAL+HF MP++F + ++F F + S + K+ E Q L IL FMLRR K+
Sbjct: 160 LWALLHFIMPTLFDSHDEFNEWFSKDIESHAQNSSSKLDEKQLQRLHMILQPFMLRRIKR 219
Query: 276 K-----------LVEC-------------------------GHLMLPPLTEITVLQKKVY 299
+++C + P++ + + K
Sbjct: 220 NVENELPDKVEVMIKCPLSARQSRIYRRLKSNIKRDQLSAITSAAMAPVSRSSRAEDKAL 279
Query: 300 ASILRKEL--------PKLLALSS--RTANHQSLQNTASGKLVVLDLLLKKLYNSGHRVL 349
+S+L + P L+A H L KL VLD +L++L GHRVL
Sbjct: 280 SSLLNMVMQFRKICNHPNLIARRPVRSPVTHAQLFVADCAKLQVLDDMLRRLKAGGHRVL 339
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+++QMT+ +D+L++FL R+Y Y RLDGS + ER + F + +D
Sbjct: 340 IYSQMTKMIDLLEEFLTHRQYKYVRLDGSSKISERRDMVADFQSR------------DDI 387
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL AADTVIFY+ DWNP VD+QA+ RAHR+GQ V L+T ++
Sbjct: 388 FAFILSTRAGGIGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTRTVTVYRLITRNS 447
Query: 470 VEEVIMRRAERKLRLSHNVV 489
VEE I+ RA+ K ++ V+
Sbjct: 448 VEERILARAQEKSKVHQMVI 467
>gi|67467805|ref|XP_649984.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56466523|gb|EAL44598.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449707532|gb|EMD47179.1| chromodomain helicase-DNA-binding protein, putative [Entamoeba
histolytica KU27]
Length = 1247
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 196/587 (33%), Positives = 307/587 (52%), Gaps = 85/587 (14%)
Query: 19 ERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSY 78
+R Q V++ + +L+ +Q+EG +WL+ + G +L DEMGLGKT+Q +SFL +
Sbjct: 282 KRVWQKKVESPNYKHGNKLRSYQLEGHNWLVFNWCRGKGCILADEMGLGKTVQVVSFLEH 341
Query: 79 LKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQ 138
L Q GPFL++ PLS+ + W E+ ++T + V+ Y G + R+ ++ + + Q
Sbjct: 342 LYSFQKLQGPFLIVVPLSMIEHWHREILEWT-DMNVVIYHGSKGNRQLVKYYEWYYKDFQ 400
Query: 139 SQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFL 198
++ L F VLLTTY++V+ D LS+I W T++DEA RLKN S L L +
Sbjct: 401 GKLI-PGHLKFHVLLTTYEIVISDWEDLSKISWLVTVVDEAHRLKNKDSKLLKALC-NIQ 458
Query: 199 MPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF 258
++L+TGTPIQNNL ELW L+++ P F +L +F F S+ EQ
Sbjct: 459 TNHKVLLTGTPIQNNLGELWTLLNYIEPKTFPSLEEFDHEFNSLDKSA---------EQV 509
Query: 259 TSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRK------- 305
L+ + F LRR K ++ + +PP E+T++QK+ Y ++ K
Sbjct: 510 NKLQESIKPFFLRRMKNEVEKS----IPPKEETIIEVELTMVQKQYYRALYEKNREFLNK 565
Query: 306 --------ELPKLLALSSRTANHQSL------QNTA----------------SGKLVVLD 335
L L+ + NH L ++TA SGKLV+LD
Sbjct: 566 GCVGSNVPNLQNLMMQLRKVCNHPYLIPGVEEKDTAQFPEGSPDYFNQLIRSSGKLVLLD 625
Query: 336 LLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQS 395
LL KLY H+VL+F+Q+ + L+I++ +L+ + Y YERLDGSI++E+R Q+
Sbjct: 626 KLLPKLYADHHKVLIFSQLKKVLNIIEKYLKYKGYFYERLDGSIKSEDR---------QN 676
Query: 396 AIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQ 455
AI+R + + F+F++ TRAGG G+NL ADTVI ++ DWNPQ D QA R HRIGQ
Sbjct: 677 AIDRFMNPEM--NRFIFLLCTRAGGFGINLSEADTVIIFDSDWNPQNDLQAQARCHRIGQ 734
Query: 456 MNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGD-----DVVDREVKERTAVETDDLR 510
V LV+++T E + RA KL L V+ + D D++ + +E+ LR
Sbjct: 735 KKEVKVYRLVSKNTYERYMFERASMKLGLDQAVLANITTSSDPKDKQQPSKELIES-LLR 793
Query: 511 SIIFGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSGKAG 557
+ +G A ++E + + +E+++ R +V K G
Sbjct: 794 NGAYG-------AFKDDEESSSKFCEED--IEQILEKRSSKVVWKGG 831
>gi|281211743|gb|EFA85905.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 1675
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/497 (34%), Positives = 271/497 (54%), Gaps = 70/497 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q+ GL WL+ Y +N +L DEMGLGKT+Q IS + YL F + P+L++ P
Sbjct: 667 GKLKEYQITGLQWLVNLYNNKLNGILADEMGLGKTVQTISLICYL-FERKVLEPYLIVAP 725
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W SE A++ PKL V+ Y G+ ++R+ + + + + F V++T
Sbjct: 726 LSTISNWESEFARWAPKLPVIIYRGKPDERKLLAKRIPRNG-------------FIVVIT 772
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+++ ++ D+ LS+ WCY IIDE R+KN S+ L LR++ RLL+TGTP+QN+L
Sbjct: 773 SFEYIIADKQILSRHTWCYIIIDEGHRIKNKSAKLSVQLRQYH-SKNRLLLTGTPLQNDL 831
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRG---KIKEQ-----FTSLKGILS 266
ELW+L++F +P++F +L+ F F ++ + K K+ E+ L +L
Sbjct: 832 GELWSLLNFLLPNIFNSLDTFEQWFNAPFANTKSAKANSLIKVNEEESLIIINRLHQVLR 891
Query: 267 AFMLRR-----------TKQKLVECGH-----LMLPPLTEITVLQKKVYASILRKELPKL 310
F+LRR K+++++C M + E L + I +K K+
Sbjct: 892 YFLLRRLKKDVESQLPEKKERVIKCNLSAMQICMYRSIAEYGQLPMDPNSEIYKKSKTKM 951
Query: 311 LALSS------RTANHQSLQNT----------ASGKLVVLDLLLKKLYNSGHRVLLFAQM 354
++ + +NH L T ASGK ++D +L K+ SGHRVL+F QM
Sbjct: 952 RGFNNVVKQLQKVSNHPYLFLTEWDINEDLIRASGKFDMMDQILIKMKASGHRVLIFTQM 1011
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA--FVF 412
T+ ++I+ ++ +R + Y RLDGS + EER RL E D+ F+F
Sbjct: 1012 TEIINIMVEYFSIRDWGYLRLDGSTKPEER-------------SRLVVEWNRKDSPYFIF 1058
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++ST AGG+G+NL ADTVI ++ DWNPQ+D QA R HR+GQ+N V L++ T+EE
Sbjct: 1059 VLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRVGQVNRVNVFRLISASTIEE 1118
Query: 473 VIMRRAERKLRLSHNVV 489
I+ RA KL L ++
Sbjct: 1119 RILERATDKLDLDAKII 1135
>gi|45201219|ref|NP_986789.1| AGR123Cp [Ashbya gossypii ATCC 10895]
gi|44986073|gb|AAS54613.1| AGR123Cp [Ashbya gossypii ATCC 10895]
gi|374110038|gb|AEY98943.1| FAGR123Cp [Ashbya gossypii FDAG1]
Length = 1422
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 179/506 (35%), Positives = 272/506 (53%), Gaps = 74/506 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + N +L DEMGLGKT+Q +SF+S+L F++ GP LV+ P
Sbjct: 354 GELRDFQLTGINWMAFLWSKSDNGILADEMGLGKTVQTVSFISWLIFARRQNGPHLVVVP 413
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W K+ P+L + Y+G ++ R IR + N+ F+VLLT
Sbjct: 414 LSTMPAWQETFEKWAPELNCVYYMGNQKSRDVIREYEFYTNPHTKGKKNIK---FNVLLT 470
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L I W + +DEA RLKN + F + R+L+TGTP+QNN+
Sbjct: 471 TYEYILKDRLELGAIKWQFLAVDEAHRLKN-AESSLYESLSSFKVANRMLITGTPLQNNI 529
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL++F MP F T++Q + F++ + K + L L ++LRR K
Sbjct: 530 KELAALVNFLMPGKF-TIDQEID-FEN--------QDEKQENYIRDLHKRLQPYILRRLK 579
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSSRT----------- 317
+ + + LP T E++ +Q + Y +IL K L A + T
Sbjct: 580 KDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYNALTAGTKGTHFSLLNIMNEL 635
Query: 318 ---ANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+NH L A SGK+V+LD LL +L GHRVL
Sbjct: 636 KKASNHPYLFGNAENRVLAKFGDGNRSRENILRGLIMSSGKMVLLDKLLTRLKKDGHRVL 695
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ A ++
Sbjct: 696 IFSQMVRMLDILGDYLSIKGINFQRLDGTVPSSQRRISIDHFN-----------APDSND 744
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ V++ T
Sbjct: 745 FVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDT 804
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVD 495
VEE ++ RA +K+ L + ++ V D
Sbjct: 805 VEEEVLERARKKMILEYAIISLGVTD 830
>gi|157875048|ref|XP_001685931.1| putative DNA-dependent ATPase [Leishmania major strain Friedlin]
gi|68129004|emb|CAJ06440.1| putative DNA-dependent ATPase [Leishmania major strain Friedlin]
Length = 1103
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 185/540 (34%), Positives = 284/540 (52%), Gaps = 71/540 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q+EG++WL+ + GVN +L DEMGLGKT Q I+ ++YLKF+ PGP LV+
Sbjct: 162 IRGKLRPYQIEGVNWLLGLFARGVNGILADEMGLGKTFQTIATIAYLKFTVGMPGPHLVV 221
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP SV W E + P L V ++ + R +I + + + + +DV+
Sbjct: 222 CPKSVMGNWYREFKHWCPGLLVYKFHASSDIRPSIVK---------AHLHPTDRIKYDVI 272
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TT+++VL + +I W Y I+DEA +LKN + L + RL++TGTP+QN
Sbjct: 273 VTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRAHTAL-DSLQTSHRLIITGTPLQN 331
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL+HF P +F F + F ++S + + ++L IL+ M+RR
Sbjct: 332 NLKELWALLHFLAPRLFNDSESFDTWFD----TTSGQQDANV---MSNLHKILAPLMIRR 384
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------LPKLLAL 313
K V G +PP EI V Q++ Y ++L K+ L ++
Sbjct: 385 LKAD-VSTG---IPPKKEIYVSCQLSKKQREWYMNVLAKDAEVLNKAGGSVASLTNVMMS 440
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKL---YNSGHRVLLFAQMT 355
+ NH L + SGK+V+LD LL +L H+VL+F+Q T
Sbjct: 441 LRKVINHPYLMDGGEEGPPFVTDEKLVRTSGKMVILDKLLHRLRADVQGRHKVLIFSQFT 500
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
L+IL+D+ +R + Y R+DG+ +R + + F+ S+ D F+F++S
Sbjct: 501 SMLNILEDYCNMRGFMYCRIDGNTSGYDRDSQMASFNSPSS-----------DYFIFLLS 549
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AA+ VI Y+ DWNPQ+D QA RAHRIGQ V VT+ T+EE +
Sbjct: 550 TRAGGLGINLQAANHVILYDSDWNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEEKMY 609
Query: 476 RRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGL-HLFDPKAINNEESDDLRL 534
RRA +KL L VV + + + A + + L I FG +F + + E+D RL
Sbjct: 610 RRALKKLYLDAVVVQQGRLQSKATNQ-ATKEELLSMITFGAEEIFKTRHEDVTEADIDRL 668
>gi|146097991|ref|XP_001468285.1| putative DNA-dependent ATPase [Leishmania infantum JPCM5]
gi|134072652|emb|CAM71368.1| putative DNA-dependent ATPase [Leishmania infantum JPCM5]
Length = 1103
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 189/558 (33%), Positives = 288/558 (51%), Gaps = 95/558 (17%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q+EG++WL+ + GVN +L DEMGLGKT Q I+ ++YLKF+ PGP LV+
Sbjct: 162 IRGKLRPYQIEGVNWLLGLFSRGVNGILADEMGLGKTFQTIATIAYLKFTVGMPGPHLVV 221
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP SV W E + P L V ++ + R +I + + + + +DV+
Sbjct: 222 CPKSVMGNWYREFKHWCPGLLVYKFHASSDIRPSIVK---------AHLHPTDRIKYDVI 272
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TT+++VL + +I W Y I+DEA +LKN + L + RL++TGTP+QN
Sbjct: 273 VTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRAHTAL-DSLQTSHRLIITGTPLQN 331
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL+HF P +F F + F ++S + + ++L IL+ M+RR
Sbjct: 332 NLRELWALLHFLAPRLFNDSESFDTWFD----TTSGQQDANV---MSNLHKILAPLMIRR 384
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------LPKLLAL 313
K V G +PP EI V Q++ Y ++L K+ L ++
Sbjct: 385 LKAD-VSTG---IPPKKEIYVSCQLSKKQREWYMNVLAKDAEVLNKAGGSVASLTNVMMS 440
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKL---YNSGHRVLLFAQMT 355
+ NH L + SGK+++LD LL +L H+VL+F+Q T
Sbjct: 441 LRKVINHPYLMDGGEEGPPFVTDEKLVRTSGKMIILDKLLHRLRADVQGKHKVLIFSQFT 500
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
L+IL+D+ +R + Y R+DG+ +R + + F+ S+ D F+F++S
Sbjct: 501 SMLNILEDYCNMRGFMYCRIDGNTSGYDRDSQMASFNSPSS-----------DYFIFLLS 549
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AA+ VI Y+ DWNPQ+D QA RAHRIGQ V VT+ T+EE +
Sbjct: 550 TRAGGLGINLQAANHVILYDSDWNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEEKMY 609
Query: 476 RRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEESDDLRLS 535
RRA +KL L D VV V+ L+S KA N ++L LS
Sbjct: 610 RRALKKLYL------DAVV---------VQQGRLQS----------KATNQASKEEL-LS 643
Query: 536 GLNSMVEKVIAMRHEQVS 553
+ E++ RHE V+
Sbjct: 644 MIKFGAEEIFKTRHEDVT 661
>gi|71400983|ref|XP_803224.1| transcription activator [Trypanosoma cruzi strain CL Brener]
gi|70865998|gb|EAN81778.1| transcription activator, putative [Trypanosoma cruzi]
Length = 1038
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 262/495 (52%), Gaps = 70/495 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q+EG++WL+ + +N +L DEMGLGKTLQ I+ L+YLKF+ PGP LV+
Sbjct: 164 IRGKLRPYQIEGVNWLLGLFSCNINGILADEMGLGKTLQTIATLAYLKFTYGLPGPHLVV 223
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP SV W E+ ++ P L ++ G E R + + S + L +D++
Sbjct: 224 CPKSVMGNWYRELKQWCPALNAFKFHGNSEIRPQLIK---------SHLQPHDKLKYDII 274
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TT+++V+ + +I W Y ++DEA +LKN ++ L + RL++TGTP+QN
Sbjct: 275 VTTFEMVIEELPTFKRIHWQYLVVDEAHKLKNEEGRVHTAL-DSLNTNHRLIITGTPLQN 333
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL+HF P +F F + F A + +++ IL+ M+RR
Sbjct: 334 NLKELWALLHFLAPRLFENAESFEAWFDTASGQQDS-------NAMSNMHKILAPLMIRR 386
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----------- 315
K + V G +PP EI V Q+K Y +L K+ L S
Sbjct: 387 IKSE-VSTG---IPPKKEIYVACKLTKTQRKWYMHVLAKDAEALNKASGGSMSSLTNIMM 442
Query: 316 ---RTANHQSLQNTA---------------SGKLVVLDLLLKKLY---NSGHRVLLFAQM 354
+ NH + + SGK+++LD LL +L H+VL+F+Q
Sbjct: 443 NLRKVINHPYMMDGGEEGPPFITDERIVKHSGKMMILDKLLYRLRREKEEKHKVLIFSQF 502
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
T LDIL+D+ +R + R+DG+ +R A + F+ + +D F+F++
Sbjct: 503 TTMLDILEDYCGMRGFRVCRIDGNTSGYDRDAQMAAFN-----------SPNSDYFIFLL 551
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STRAGG+G+NL AA+ V+ Y+ DWNPQ+D QA RAHRIGQ V +TE TVEE I
Sbjct: 552 STRAGGLGINLQAANHVVIYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFITEGTVEEKI 611
Query: 475 MRRAERKLRLSHNVV 489
RRA +KL L VV
Sbjct: 612 YRRALKKLYLDAMVV 626
>gi|237844775|ref|XP_002371685.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin, putative [Toxoplasma gondii ME49]
gi|211969349|gb|EEB04545.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin, putative [Toxoplasma gondii ME49]
Length = 1249
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 200/586 (34%), Positives = 294/586 (50%), Gaps = 122/586 (20%)
Query: 38 KPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSV 97
KP+Q+EGL+WLI+ + G+N +L DEMGLGKT Q IS L++LK + GP LVL P S
Sbjct: 258 KPYQLEGLNWLIQLHERGMNGILADEMGLGKTYQTISLLAFLKEGKGVDGPHLVLAPKST 317
Query: 98 TDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF-------- 149
W++E KF P + +R +G++E R RRT+ H+ ++Q S+ P F
Sbjct: 318 IGNWMTEFRKFCPSINAVRVLGDKETR---RRTLA-HIVSRTQASSF-PFSFPGEKTLRS 372
Query: 150 -----------------------------------------DVLLTTYDVV-------LM 161
VL DVV ++
Sbjct: 373 ESSPESEEEKSDDETQKDLKGAERPDEDGEEGAKEEKEEDDGVLPDRVDVVVTSFEMCIL 432
Query: 162 DQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALM 221
++ ++ W Y IIDEA R+KN SS L R F RLL+TGTP+QNNL ELWAL+
Sbjct: 433 ERAQFLKVDWEYIIIDEAHRIKNESSKLAQTAR-LFNTKHRLLLTGTPLQNNLRELWALL 491
Query: 222 HFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-------FTSLKGILSAFMLRRTK 274
+F PS+F + +F F D + A +E+ T L IL FMLRR K
Sbjct: 492 NFLFPSLFSSSAEFEHLF-DLTGTGEAGSEMTAEEREERNMKIVTRLHRILRPFMLRRVK 550
Query: 275 QKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKL-------------LALSS 315
+++++ +PP E ++ +QK++Y +L K + L LA+
Sbjct: 551 KEVLK----EMPPKKELLLVVPLSAMQKQLYKDLLTKNVAALQGAEGAGRTQLLNLAMQL 606
Query: 316 RTA-NHQSLQNT---------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
R A NH L + +GKL D LL++L R L+F QMT+ +D
Sbjct: 607 RKACNHPYLFDGYESEHADPFGEHVIENAGKLRFCDRLLRRLIQENRRCLIFTQMTKMID 666
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ +R + Y R+DG+ +ER I F+ A G+D +F++STRAG
Sbjct: 667 ILEDYCRIRLFKYCRIDGNTSGDERDRQIEAFN-----------APGSDIPIFLLSTRAG 715
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL ADTVI Y+ DWNPQVD QA+ R HRIGQ + V LV EHT+E+ I+ RA
Sbjct: 716 GLGINLATADTVILYDSDWNPQVDLQAMDRVHRIGQKSAVNVYRLVHEHTIEQKIIERAM 775
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKA 523
KL+L ++ + + ++ + ++L +++ FG H+F A
Sbjct: 776 LKLQLDTAIIQQGRLSDQQNQQKQLSKNELMTMVQFGADHIFKSGA 821
>gi|385305649|gb|EIF49609.1| chromo domain protein 1 [Dekkera bruxellensis AWRI1499]
Length = 1429
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 193/524 (36%), Positives = 284/524 (54%), Gaps = 80/524 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ Q+ GL+W+ + N +L DEMGLGKT+Q I+FLS+L +++ GP LV+ PLS
Sbjct: 393 LRDFQLTGLNWMAYLWSRNENGILADEMGLGKTVQTIAFLSWLIYARRQNGPHLVVVPLS 452
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLLTT 155
W + P + V+ Y+G + R+ IR Y K + + F++LLTT
Sbjct: 453 TVPSWQETFELWAPDINVIYYMGNTKARKTIRDYEFYSGSKRKXK--------FNILLTT 504
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+ +L D+ L W Y +DEA RLKN S LY L E F + RLL+TGTP+QNNL
Sbjct: 505 YEYILKDKAELGSFKWQYLAVDEAHRLKNAESSLYQSLME-FKVANRLLITGTPLQNNLK 563
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
EL AL +F MP F D +AP + +E +L+ + ++LRR K
Sbjct: 564 ELAALCNFLMPGKFDI---------DENIDFNAPG-TEAEEAIKNLQSSIKPYILRRLK- 612
Query: 276 KLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS-------------- 315
K VE LP T E++ +Q Y +IL K L SS
Sbjct: 613 KDVESS---LPGKTERILRVELSDVQTDYYKNILTKNYRALRDASSGSQVSLLNVVAELK 669
Query: 316 RTANH-----------------QSLQNT------ASGKLVVLDLLLKKLYNSGHRVLLFA 352
+ +NH +S +N +SGK+V+LD LLKKL GHRVL+F+
Sbjct: 670 KASNHPYLFDGVEDSVLAKAGSKSRENILRGMIMSSGKMVLLDQLLKKLKRDGHRVLIFS 729
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM + LDI+ D+L L+ +++RLDG+I + R AI HF+ + G+ F+F
Sbjct: 730 QMVRMLDIIGDYLSLKGLNFQRLDGTIPSYRRRIAIDHFN-----------SDGSKDFIF 778
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ V++ T+EE
Sbjct: 779 LLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRFVSKDTIEE 838
Query: 473 VIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FG 515
++ RA +K+ L + ++ + D++ ++ T +L I+ FG
Sbjct: 839 QVLERARKKMILEYAIISLGITDKKT-QKDEPSTGELSEILKFG 881
>gi|71649857|ref|XP_813640.1| transcription activator [Trypanosoma cruzi strain CL Brener]
gi|70878541|gb|EAN91789.1| transcription activator, putative [Trypanosoma cruzi]
Length = 1092
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 265/495 (53%), Gaps = 70/495 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q+EG++WL+ + +N +L DEMGLGKTLQ I+ L+YLKF+ PGP LV+
Sbjct: 143 IRGKLRPYQIEGVNWLLGLFSCNINGILADEMGLGKTLQTIATLAYLKFTYGLPGPHLVV 202
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP SV W E+ ++ P L ++ G E R + ++ H++ + L +D++
Sbjct: 203 CPKSVMGNWYRELKQWCPALNAFKFHGNSEIRPQLIKS---HLQPHDK------LKYDII 253
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TT+++V+ + +I W Y ++DEA +LKN ++ L + RL++TGTP+QN
Sbjct: 254 VTTFEMVIEELPTFKRIHWQYLVVDEAHKLKNEEGRVHTAL-DSLNTNHRLIITGTPLQN 312
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL+HF P +F F + F A + +++ IL+ M+RR
Sbjct: 313 NLKELWALLHFLAPRLFENAESFEAWFDTASGQQDS-------NAMSNMHKILAPLMIRR 365
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----------- 315
K + V G +PP EI V Q+K Y +L K+ L S
Sbjct: 366 IKSE-VSTG---IPPKKEIYVACKLTKTQRKWYMHVLAKDAEALNKASGGSMSSLTNIMM 421
Query: 316 ---RTANHQSLQNTA---------------SGKLVVLDLLLKKLY---NSGHRVLLFAQM 354
+ NH + + SGK+++LD LL +L H+VL+F+Q
Sbjct: 422 NLRKVINHPYMMDGGEEGPPFITDERIVKHSGKMMILDKLLYRLRREKEEKHKVLIFSQF 481
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
T LDIL+D+ +R + R+DG+ +R A + F+ + +D F+F++
Sbjct: 482 TTMLDILEDYCGMRGFRVCRIDGNTSGYDRDAQMAAFN-----------SPNSDYFIFLL 530
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STRAGG+G+NL AA+ V+ Y+ DWNPQ+D QA RAHRIGQ V +TE TVEE I
Sbjct: 531 STRAGGLGINLQAANHVVIYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFITEGTVEEKI 590
Query: 475 MRRAERKLRLSHNVV 489
RRA +KL L VV
Sbjct: 591 YRRALKKLYLDAMVV 605
>gi|255580599|ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis]
gi|223529287|gb|EEF31257.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis]
Length = 1718
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 196/553 (35%), Positives = 289/553 (52%), Gaps = 99/553 (17%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+EGL++L+ + NV+L DEMGLGKT+Q+ +Q PGPFLV+ P
Sbjct: 598 GKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQS--------NAQQIPGPFLVVVP 649
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W E K+ P + ++ YVG R R ++ + + K+ + P+ F+ LLT
Sbjct: 650 LSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYNDKKVGR-----PIKFNALLT 704
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+VVL D+ LS+I W Y ++DEA RLKN + LY L E F +LL+TGTP+QN++
Sbjct: 705 TYEVVLKDKAVLSKIRWNYLMVDEAHRLKNSEAQLYTTLSE-FSTKNKLLITGTPLQNSV 763
Query: 215 SEL-WALM---HFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
EL W+ FC+ F QF ++ + +L L +L
Sbjct: 764 EELCWSCKLQELFCIQLQF----QFFHEWQAS--------------SLANLHMELRPHIL 805
Query: 271 RRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKE--------------LPKL 310
RR + + + LPP E++ LQK+ Y IL + L +
Sbjct: 806 RRVIKDVEKS----LPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNI 861
Query: 311 LALSSRTANHQSLQNTA----------------------SGKLVVLDLLLKKLYNSGHRV 348
+ + NH L +A SGKLV+LD LL +L+ + HRV
Sbjct: 862 VVELKKCCNHPFLFESADHGYGGDSGFNDSSKLERIILSSGKLVILDKLLVRLHETKHRV 921
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL ++L LR + ++RLDGS +AE R A+ HF+ A G+D
Sbjct: 922 LIFSQMVRLLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFN-----------APGSD 970
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V VT
Sbjct: 971 DFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSK 1030
Query: 469 TVEEVIMRRAERKLRLSHNVVGD-----DVVDREVKERTAVETDDLRSII-FGLHLFDPK 522
+VEE I+ RA++K+ L H V+ + +E K+ + + ++L +I+ FG +
Sbjct: 1031 SVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGSYFDKNELSAILRFGAEELFKE 1090
Query: 523 AINNEESDDLRLS 535
N EES LS
Sbjct: 1091 DKNEEESKKRLLS 1103
>gi|430812954|emb|CCJ29671.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 1131
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 184/498 (36%), Positives = 268/498 (53%), Gaps = 80/498 (16%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDE--MGLGKTLQAISFLSYLKFSQMSPGPFLV 91
EL+ Q+ G++W+ + N +L DE MGLGKT Q +SFLSYL + GPFL+
Sbjct: 160 NGELRDFQLTGVNWMAYLWSKNENGILADEVFMGLGKTAQTVSFLSYLVHTLHIHGPFLI 219
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W + + L + Y+G + R+ I+ YE + N L F++
Sbjct: 220 VVPLSTIPAWQENLETWATDLNSIIYIGNSKARKTIQE--YEFYID----GNSKKLKFNI 273
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+ +L D+ L+QI W Y +DEA RLKN S LY L++ F RLL+TGTP+Q
Sbjct: 274 LITTYEYILKDRYELNQIKWQYMAVDEAHRLKNSESQLYESLKD-FKTVNRLLITGTPLQ 332
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NN+ EL AL+ F MP F + + +A + I++ L L ++LR
Sbjct: 333 NNIKELAALIDFLMPKRFEIDREL------NFETPNAEQEAYIRD----LHKRLQPYILR 382
Query: 272 RTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS---------- 315
R K+ + + LP + E++ LQ Y +IL + + L++S+
Sbjct: 383 RLKKDVEKS----LPSKSERILRVELSELQTHWYKNILTRNY-RALSMSTGNSQLNLLNI 437
Query: 316 -----RTANHQSLQNTA------------------------SGKLVVLDLLLKKLYNSGH 346
+ +NH L A SGK+++LD LL +L GH
Sbjct: 438 VIELKKASNHPYLFPNAEENWLNNIGSKKTREDILRGIVINSGKMILLDKLLTRLKRDGH 497
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QM + LDI+ D+L LR ++RLDG+I A R A+I HF+ A G
Sbjct: 498 RVLIFSQMVRMLDIIGDYLVLRGLPFQRLDGTISAPIRKASIEHFN-----------AAG 546
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
+ FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ +HV+ V+
Sbjct: 547 SPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKSHVMVYRFVS 606
Query: 467 EHTVEEVIMRRAERKLRL 484
+ TVEE I+ RA RK+ L
Sbjct: 607 KDTVEEDILERARRKMIL 624
>gi|281211051|gb|EFA85217.1| myb domain-containing protein [Polysphondylium pallidum PN500]
Length = 1186
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 192/541 (35%), Positives = 283/541 (52%), Gaps = 95/541 (17%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +Q+ GL+WLI+ Y G+N +L DEMGLGKTL GP L++ P S
Sbjct: 206 MRDYQIYGLNWLIQLYERGINGILADEMGLGKTL----------------GPHLIIAPKS 249
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
GW E + P L V+++ GE+++R+ I+ H K FDV +TTY
Sbjct: 250 TLSGWCKEFKNWCPSLRVVKFHGEKQERQKIKTEQLVHKK------------FDVCVTTY 297
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ D+ + W Y IIDEA R+KN +SVL +R F RLL+TGTP+QNNL E
Sbjct: 298 EMVIKDKSVFKKFSWRYIIIDEAHRIKNENSVLSKGVR-LFNSQFRLLITGTPLQNNLHE 356
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL++F +P VF + + F F + + +E L +L F+LRR K +
Sbjct: 357 LWALLNFLLPDVFSSSDDFDRWF-------NLEQTENQQEVIDKLHKVLRPFLLRRLKSE 409
Query: 277 LVECGHLMLPPLTEI------TVLQKKVYASILRKELP--------------KLLALS-- 314
+ + LPP EI + +Q++ Y +L K+ KLL +
Sbjct: 410 VEKS----LPPKKEIKLYVGLSAMQREWYKRLLSKDFEALHGVGVKGSSGRVKLLNICMQ 465
Query: 315 -SRTANHQSLQNTA--------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V+LD LL +L G RVL+F+Q + LD
Sbjct: 466 LRKACNHPYLFDGAEEQPYTTGDHLINNSGKMVLLDKLLGRLKQRGSRVLIFSQWARMLD 525
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R YSY R+DGS ++ R I F+ G+ FVF+++TRAG
Sbjct: 526 ILEDYLLYRDYSYCRIDGSTDSQTRENYIESFN-----------EPGSKHFVFILTTRAG 574
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+ L AD VI ++ DWNPQ+D QA RAHRIGQ V VTE ++EE ++ +AE
Sbjct: 575 GLGITLNTADVVILFDSDWNPQMDLQAQDRAHRIGQTKPVTVYRFVTESSMEEKMVEKAE 634
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPK--AINNEESDDLRLS 535
KL+L V+ R V++ + ++L S+I FG +F K +I +E+ D +
Sbjct: 635 LKLQLDAVVIQQ---GRLVEQNKSANPEELLSMIRFGADDIFKCKDSSITDEDIDSILQK 691
Query: 536 G 536
G
Sbjct: 692 G 692
>gi|340377289|ref|XP_003387162.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
[Amphimedon queenslandica]
Length = 1906
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 190/497 (38%), Positives = 265/497 (53%), Gaps = 74/497 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+P+Q+EGL+WL+ + N +L DEMGLGKT+Q+I+ + + + + GPFLV+ PLS
Sbjct: 1001 LRPYQLEGLNWLLFNWYTRQNCILADEMGLGKTVQSIALILEIIDAGIR-GPFLVIAPLS 1059
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSPLPFDVLLTT 155
W E ++ L V+ Y G RR I+ YE + ++QS + F+V++TT
Sbjct: 1060 TISNWQREFETWS-NLNVIIYHGSAYSRRMIQE--YELYFRDQSGKIIIDAYKFNVIVTT 1116
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+V+L D L I W IIDEA RLKN + + LRE M R+L+TGTP+QN++
Sbjct: 1117 YEVLLSDNSELKNILWRAVIIDEAHRLKNKNCKMLEGLRE-LHMEHRVLLTGTPLQNSVD 1175
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
EL++L++F PS F +L FL F D K +EQ L+ +L MLRR K+
Sbjct: 1176 ELFSLLNFLEPSQFPSLQLFLQQFGDL----------KTEEQVEELQTVLKPMMLRRLKE 1225
Query: 276 KLVECGHLMLPPL------TEITVLQKKVYASILRKE----------LPKLLALS---SR 316
+ + L P E+T +QK+ Y +IL + +P LL +
Sbjct: 1226 DVEKS----LAPKEETIIEIELTAIQKQYYRAILERNFTFLTKGSNTVPNLLNTMMELRK 1281
Query: 317 TANHQSLQN------------------------TASGKLVVLDLLLKKLYNSGHRVLLFA 352
NH L ASGKLV++D LL KL GH+VL+F+
Sbjct: 1282 CCNHPFLIAGAELKIVEDFQVHFPNRHISESLIQASGKLVLVDKLLPKLREKGHKVLIFS 1341
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QM + LDIL+D+L ++ Y YER+DG +R R AAI FS D FVF
Sbjct: 1342 QMVKCLDILEDYLRMKGYMYERIDGQVRGTLRQAAIDRFSKPEY-----------DRFVF 1390
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++ TRAGG+G+NL AADTVI Y+ DWNPQ D QA R HRIGQ V L+T ++ E
Sbjct: 1391 LLCTRAGGLGINLTAADTVIIYDSDWNPQNDIQAQARCHRIGQNKMVKVYRLITTNSYER 1450
Query: 473 VIMRRAERKLRLSHNVV 489
+ RA KL L V+
Sbjct: 1451 EMFDRASLKLGLDKAVL 1467
>gi|196014269|ref|XP_002116994.1| hypothetical protein TRIADDRAFT_60972 [Trichoplax adhaerens]
gi|190580485|gb|EDV20568.1| hypothetical protein TRIADDRAFT_60972 [Trichoplax adhaerens]
Length = 1002
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 197/533 (36%), Positives = 281/533 (52%), Gaps = 89/533 (16%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
++ +Q+ GL+WLI + +N +L DEMGLG Y+K + GP LV+ P S
Sbjct: 134 MRDYQIRGLNWLISLHENSINGILADEMGLG----------YMKHFRNVDGPHLVIVPKS 183
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRN-IRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
W SE ++ P LEV+ +G +E+R IR TM P + V +TT
Sbjct: 184 TLHNWSSEFRRWCPSLEVVCLIGNQEERATFIRETML-------------PGKWSVCVTT 230
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L ++ + W Y IIDEA R+KN S L ++RE RLL+TGTP+QNNL
Sbjct: 231 YEMMLREKAVFKKFIWRYLIIDEAHRIKNEKSKLSEIVRE-LKSVNRLLLTGTPLQNNLH 289
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL++F +P VF F + F ++S + E+ L +L F+LRR K
Sbjct: 290 ELWALLNFLLPDVFNCSEDFDAWF----DTNSCLGDNSLVER---LHAVLRPFLLRRLKS 342
Query: 276 KLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALSS 315
+ VE G L P E+ V +Q++ Y IL K+ L +L
Sbjct: 343 E-VEKG---LKPKKEVKVYVGLSRMQREWYTKILMKDIDIVNGAGKTDKMRLLNILMQLR 398
Query: 316 RTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
+ NH L + T GK+VVL+ LL +L G RVL+F+QMT+ LDI
Sbjct: 399 KCCNHPYLFDGAEPGPPYTTDTHLATNCGKMVVLEKLLPRLQAQGSRVLVFSQMTRMLDI 458
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L+D+ + Y Y RLDGS E+R A+I+ F++ + D F+FM+STRAGG
Sbjct: 459 LEDYCMWKGYKYCRLDGSTPHEDRQASIQAFNMPDS-----------DKFLFMLSTRAGG 507
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V +T++T+EE I+ RAE
Sbjct: 508 LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQTKEVKVFRFITDNTIEERIVERAET 567
Query: 481 KLRLSHNVVGDDVVDREVKERTAVETDDLRSII--FGLHLFDPKAINNEESDD 531
KLRL V+ R V + V D++ ++I H+F K ++E +DD
Sbjct: 568 KLRLDRIVIQQ---GRLVDQSRTVSKDEMLNMIRHGAGHVFASK--DSEITDD 615
>gi|84043448|ref|XP_951514.1| transcription activator [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|33348313|gb|AAQ15639.1| transcription activator, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62359085|gb|AAX79532.1| transcription activator, putative [Trypanosoma brucei]
gi|261326368|emb|CBH09327.1| transcription activator, putative [Trypanosoma brucei gambiense
DAL972]
Length = 1160
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 179/495 (36%), Positives = 259/495 (52%), Gaps = 70/495 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q+EG++WL+ Y +N +L DEMGLGKTLQ IS L+YLKFS PGP LV+
Sbjct: 170 IRGKLRPYQIEGVNWLLGLYSRCINGILADEMGLGKTLQTISTLAYLKFSHGLPGPHLVV 229
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP SV W E+ ++ P L VL++ NIR + ++ + + +D++
Sbjct: 230 CPKSVMGNWYREVRQWCPALSVLKF----HCSSNIRPQLV-----RAHLMPCGNIKYDII 280
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TT+++VL + G +IPW Y I+DEA +LKN + L RL++TGTP+QN
Sbjct: 281 VTTFEMVLEEHGAFRKIPWQYLIVDEAHKLKNEEGRAHVTLGS-INANYRLIITGTPLQN 339
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL+HF P +F F S F A + E +++ IL+ M+RR
Sbjct: 340 NLKELWALLHFLTPRLFDDSKSFDSWFDTASGQEDS-------EALSNMHQILAPLMIRR 392
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLA 312
K + V G +PP EI V +Q++ Y +L K+ L L
Sbjct: 393 LKSE-VSTG---IPPKKEIYVSCRLSKVQRRWYMQVLAKDAEVLNKGSGGSSAFLTNTLM 448
Query: 313 LSSRTANHQSLQNTA-SGKLVVLDLLLKKLYNS-----------------GHRVLLFAQM 354
+ NH + + G + D + K GH+VL+F+Q
Sbjct: 449 SLRKVINHPYMMDGGEEGPPFITDERIVKYSGKMLLLDKLLHRLRRDEKEGHKVLIFSQF 508
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
T LDIL+D+ +R + R+DGS +R + + F+ A +D F+F++
Sbjct: 509 TSMLDILEDYCSMRGFKVCRIDGSTSGYDRDSQMAAFN-----------APKSDYFIFLL 557
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STRAGG+G+NL AA+ VI Y+ DWNPQ+D QA RAHRIGQ V VT+ TVEE I
Sbjct: 558 STRAGGLGINLQAANNVIIYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFVTDGTVEERI 617
Query: 475 MRRAERKLRLSHNVV 489
RA +KL L VV
Sbjct: 618 YHRALKKLYLDAMVV 632
>gi|209877056|ref|XP_002139970.1| transcription regulatory protein SNF2 [Cryptosporidium muris RN66]
gi|209555576|gb|EEA05621.1| transcription regulatory protein SNF2, putative [Cryptosporidium
muris RN66]
Length = 1464
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 188/513 (36%), Positives = 282/513 (54%), Gaps = 72/513 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q++GL WL+ Y +N +L D MGLGKT+Q +S L+++ ++ + GP L++ P
Sbjct: 590 GQLREYQMKGLEWLVSLYNNNLNGILADAMGLGKTVQTVSVLAHIYETKGNRGPHLIIAP 649
Query: 95 LSVTDG-WVSEMAKFTPKLEVLRYVGEREQRRNIR-RTMYEHVKEQSQMSNVSPLPFDVL 152
LS G W +E + P + Y G +E R+ +R + M K F VL
Sbjct: 650 LSTLHGNWENEFNCWLPDFVKVIYEGNKEVRKQLRSKYMTGEAK------------FHVL 697
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTT ++ D+ +L + W Y I+DEA RLKNP S L +L F RL +TGTP+QN
Sbjct: 698 LTTDAFIMKDKHYLRRFDWEYIIVDEAHRLKNPKSKLVQILNSGFRAKHRLALTGTPLQN 757
Query: 213 NLSELWALMHFCMPSVFGT-------LNQFLSTFKDAVHSSSAPKRGKI------KEQF- 258
+L E+WAL+++ MP++F + N+ LST K + SSS G I +EQ
Sbjct: 758 DLQEVWALLNYLMPNIFNSSDTFQQWFNEPLSTIKSSGRSSSNSDSGMIPLDISEEEQLL 817
Query: 259 --TSLKGILSAFMLRRTKQKLVECGHLMLPPLTEI-----TVLQKKVYASILRKEL--PK 309
L +L F+LRR K ++ + + P L EI + LQ+ +Y + E P
Sbjct: 818 IVDRLHKVLRPFLLRREK---IQVANEVPPKLEEILWCPLSGLQQYLYKELENNENSGPN 874
Query: 310 LLALSSRTANHQSLQNT------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+L + NH L +T GK V+LD +L KL +GHRVL+F+QMT+
Sbjct: 875 VLMQLRKVCNHPFLFSTEMQLPSDESIIRVCGKFVMLDSILPKLRAAGHRVLIFSQMTRL 934
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
L +L+ FL LR +Y RLDG+ +E+R +++ F+ A + FVF++ST+
Sbjct: 935 LSLLEIFLSLRNMTYLRLDGTTLSEDRQNSLQLFN-----------ATNSPYFVFLLSTK 983
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG G+NL +ADTVI ++ DWNPQ D+QA RAHRIGQ VL++ VT TVEE IM+
Sbjct: 984 AGGFGINLQSADTVILFDSDWNPQNDEQAQSRAHRIGQTKEVLTLRFVTPDTVEERIMKT 1043
Query: 478 AERKLR---------LSHNVVGDDVVDREVKER 501
A KL + H++ D ++++ KE+
Sbjct: 1044 AGIKLDKDALIIKSGMYHDLYAGDDLEQKRKEK 1076
>gi|407862998|gb|EKG07817.1| transcription activator, putative [Trypanosoma cruzi]
Length = 1113
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/495 (35%), Positives = 262/495 (52%), Gaps = 70/495 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q+EG++WL+ + +N +L DEMGLGKTLQ I+ L+YLKF+ PGP LV+
Sbjct: 164 IRGKLRPYQIEGVNWLLGLFSRNINGILADEMGLGKTLQTIATLAYLKFTYGLPGPHLVV 223
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP SV W E+ ++ P L ++ G E R + + S + L +D++
Sbjct: 224 CPKSVMGNWYRELKQWCPALNAFKFHGTSEIRPQLIK---------SHLQPHDKLKYDII 274
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TT+++V+ + +I W Y ++DEA +LKN ++ L + RL++TGTP+QN
Sbjct: 275 VTTFEMVIEELPTFKRIHWQYLVVDEAHKLKNEEGRVHTAL-DSLNTNHRLIITGTPLQN 333
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL+HF P +F F + F A + +++ IL+ M+RR
Sbjct: 334 NLKELWALLHFLAPRLFENAESFEAWFDTASGQQDS-------NAMSNMHKILAPLMIRR 386
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----------- 315
K + V G +PP EI V Q+K Y +L K+ L S
Sbjct: 387 IKSE-VSTG---IPPKKEIYVACKLTKTQRKWYMHVLAKDAEALNKASGGSMSSLTNIMM 442
Query: 316 ---RTANHQSLQNTA---------------SGKLVVLDLLLKKLY---NSGHRVLLFAQM 354
+ NH + + SGK+++LD LL +L H+VL+F+Q
Sbjct: 443 NLRKVINHPYMMDGGEEGPPFITDERIVKHSGKMMILDKLLYRLRREKEEKHKVLIFSQF 502
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
T LDIL+D+ +R + R+DG+ +R A + F+ + +D F+F++
Sbjct: 503 TTMLDILEDYCGMRGFRVCRIDGNTSGYDRDAQMAAFN-----------SPNSDYFIFLL 551
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STRAGG+G+NL AA+ V+ Y+ DWNPQ+D QA RAHRIGQ V +TE TVEE I
Sbjct: 552 STRAGGLGINLQAANHVVIYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFITEGTVEEKI 611
Query: 475 MRRAERKLRLSHNVV 489
RRA +KL L VV
Sbjct: 612 YRRALKKLYLDAMVV 626
>gi|407396862|gb|EKF27569.1| transcription activator, putative [Trypanosoma cruzi marinkellei]
Length = 1113
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 175/495 (35%), Positives = 261/495 (52%), Gaps = 70/495 (14%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q+EG++WL+ + +N +L DEMGLGKTLQ I+ L+YLKF+ PGP LV+
Sbjct: 164 IRGKLRPYQIEGVNWLLGLFSRNINGILADEMGLGKTLQTIATLAYLKFTYGLPGPHLVV 223
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP SV W E+ ++ P L ++ G E R + + S + L +D++
Sbjct: 224 CPKSVMGNWYRELKQWCPALNAFKFHGIGEIRPQLIK---------SHLQPHDKLKYDIV 274
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TT+++V+ + +I W Y I+DEA +LKN ++ L + RL++TGTP+QN
Sbjct: 275 VTTFEMVIEELPTFKRINWQYLIVDEAHKLKNEEGRVHTAL-DSLNTNHRLIITGTPLQN 333
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL+HF P +F F F A + +++ IL+ M+RR
Sbjct: 334 NLKELWALLHFLAPRLFDNAESFEEWFDTASGQQDS-------NAMSNMHKILAPLMIRR 386
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----------- 315
K + V G +PP EI V Q+K Y +L K+ L S
Sbjct: 387 VKSE-VSTG---IPPKKEIYVACKLTKTQRKWYMHVLAKDAEALNKASGGSMSSLTNIMM 442
Query: 316 ---RTANHQSLQNTA---------------SGKLVVLDLLLKKLY---NSGHRVLLFAQM 354
+ NH + + SGK+++LD LL +L H+VL+F+Q
Sbjct: 443 NLRKVINHPYMMDGGEEGPPFITDERIVKHSGKMMILDKLLYRLRREKEEKHKVLIFSQF 502
Query: 355 TQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMI 414
T LDIL+D+ +R + R+DG+ +R A + F+ + +D F+F++
Sbjct: 503 TTMLDILEDYCGMRGFRVCRIDGNTSGYDRDAQMAAFN-----------SPNSDYFIFLL 551
Query: 415 STRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVI 474
STRAGG+G+NL AA+ V+ Y+ DWNPQ+D QA RAHRIGQ V +TE TVEE I
Sbjct: 552 STRAGGLGINLQAANHVVIYDSDWNPQMDLQAQDRAHRIGQKRVVRVYRFITEGTVEEKI 611
Query: 475 MRRAERKLRLSHNVV 489
RRA +KL L VV
Sbjct: 612 YRRALKKLYLDAMVV 626
>gi|449016451|dbj|BAM79853.1| chromatin remodeling complex SWI/SNF component, Snf2 [Cyanidioschyzon
merolae strain 10D]
Length = 1332
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 267/504 (52%), Gaps = 58/504 (11%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
ELK +Q+ G+ WL+ Y +N +L DEMGLGKT+Q I+ L +L + GPFL++ P
Sbjct: 590 GELKHYQLVGVEWLLSLYNNRLNGVLADEMGLGKTVQTIALLCHLIEFKQDEGPFLIVVP 649
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W SE+A + P L+V + G+R RR + ++ V++ S PF +LLT
Sbjct: 650 LSTVSNWESELAHWAPSLKVSVFKGDRTARRRLANELF--VRDAS-----GRFPFHILLT 702
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ L + LS+I W Y I+DE R+KN +S L VL + + RLL+TGTP+ N+L
Sbjct: 703 TYEYALRARAALSKIIWSYIIVDEGHRIKNAASKLAQVLGQKYRSRNRLLLTGTPLHNSL 762
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ----FTSLKGILSAFML 270
SELW+L++F +P +F + + F + F + +E+ L +L F+L
Sbjct: 763 SELWSLLNFLLPQIFSSCDTFEAWFNAPFATMPGEHLELTEEESLLIINRLHKVLRPFLL 822
Query: 271 RRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELPKLLALSSRTANHQSLQ 324
RR K +++ G LP L +++ Q+ VY ++R E S R H L
Sbjct: 823 RRLKNEILRGGE-KLPEKREVLFLCDMSAWQRLVYRQLIRHERVVFTDKSGRH-RHDRLS 880
Query: 325 NT----------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
N+ ASGK +LD ++KL +GHRVL+F QMT+
Sbjct: 881 NSKMQLRKIVNHPYLFHPEYEKGGVNELVRASGKFQILDSCIQKLLRTGHRVLIFNQMTR 940
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
+D+ + L R + RL G A+ER ++ F+ G VF+++T
Sbjct: 941 IMDLQERLLRARNIPFLRLQGLTTADERRELVQEFN-----------RPGTKYNVFLLTT 989
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL ADTVI ++ DWNPQ+D QA RAHRIGQ V + +VT +VE+ ++
Sbjct: 990 RAGGLGVNLQTADTVILFDSDWNPQMDIQAQDRAHRIGQKKAVRVLRIVTARSVEQHVLD 1049
Query: 477 RAERKLRLSHNVVGDDVVDREVKE 500
+AE KL L ++ + +E K+
Sbjct: 1050 KAELKLDLEQKIIRAGMFHQEAKD 1073
>gi|209877158|ref|XP_002140021.1| chromatin remodelling complex SNF2H [Cryptosporidium muris RN66]
gi|209555627|gb|EEA05672.1| chromatin remodelling complex SNF2H, putative [Cryptosporidium
muris RN66]
Length = 1288
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 199/590 (33%), Positives = 293/590 (49%), Gaps = 112/590 (18%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +K +Q+EGL+WL + Y +N +L DEMGLGKTLQ+IS L YLK GP ++L
Sbjct: 162 IMGRMKYYQLEGLNWLYQLYKYKINGILADEMGLGKTLQSISILGYLKSICKIQGPHIIL 221
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQR-----------------RNIRRTMYEHV 135
P S D W E+ ++ P L V++ G++ R N R+ +
Sbjct: 222 TPRSTLDNWHCELRRWCPSLRVVKLHGDKLHRDSLFNHRIFPGYKVLMKENFRKYETLDL 281
Query: 136 KEQSQMSN---------------------------------VSPLPFDVLLTTYDVVLMD 162
K++S N F+V LTT+++ + +
Sbjct: 282 KKESTEHNSTNNTDKFQPDSTEKQESCRIIVENEILEDQIHCDDKSFNVCLTTFEMAIKE 341
Query: 163 QGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR-RLLMTGTPIQNNLSELWALM 221
+ L +I W + I+DEA R+KN S+L V+R L + RLL+TGTP+QNNL ELW+L+
Sbjct: 342 RWRLQKIDWHHLILDEAHRIKNEKSILSEVVR--LLKSKYRLLITGTPLQNNLKELWSLL 399
Query: 222 HFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECG 281
+F MPS+F + F + F + S ++ I+ +L IL FMLRR K +
Sbjct: 400 NFLMPSLFSSSGDFEALFDFSRLDSDEQQKRVIQ----TLHSILRPFMLRRLKTDV---- 451
Query: 282 HLMLPPLTEITV------LQKKVYASILRKELP-------------KLLALSSRTANHQS 322
LP E+ V LQKK+Y+ +L + L LL + NH
Sbjct: 452 ERELPSKRELYVYIGLSKLQKKIYSELLTRNLDILNNVTYNKTQMLNLLMQLRKVCNHPY 511
Query: 323 LQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLEL 367
L + ASGK+V+L LL KL++ G RVLLF+QMT+ LDI+ D+L
Sbjct: 512 LFDGVEPGPPYVEGFHMVEASGKMVLLHKLLPKLFSQGSRVLLFSQMTRLLDIIDDYLRW 571
Query: 368 RKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVA 427
Y Y R+DGS ER I F+ G+D +F++STRAGG+G+NL
Sbjct: 572 CGYPYCRIDGSTPGIERQERIDLFN-----------KSGSDKLIFLLSTRAGGIGINLAT 620
Query: 428 ADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHN 487
AD VI ++ D+NPQ+D QA+ RAHRIGQ V VTE +VEE I+ RA +KL+L
Sbjct: 621 ADVVILFDSDFNPQMDLQAMDRAHRIGQKKTVTVYRFVTEKSVEERIVERAAKKLKLDSL 680
Query: 488 VVGDDVVDREVKERTAVETDDLRSII-FG----LHLFDPKAINNEESDDL 532
++ + +A + +L +I FG H D ++ +E+ D +
Sbjct: 681 IIQQGRLSNSAS-HSAPDNKELHEMIQFGAQEVYHTRDSSSVTDEDIDTI 729
>gi|324500543|gb|ADY40253.1| ATP-dependent helicase brm [Ascaris suum]
Length = 1261
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 299/559 (53%), Gaps = 81/559 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
T +LKP+Q++G+ W++ + +N +L D+MGLGKT+Q I+ ++YL + GP+L++
Sbjct: 481 TLQLKPYQLKGVEWMVSLFNNNLNGILADDMGLGKTIQTIALIAYLMEVKKVNGPYLIIV 540
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
PLS W E+ K+ P + + Y G R+ RR + + + F+VLL
Sbjct: 541 PLSTISNWEFELEKWAPSVVKVVYKGCRKMRRTLGGIILREM-------------FNVLL 587
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTYD VL ++ L +I W Y IIDE R++N L L F RLL+TGTP+QN
Sbjct: 588 TTYDYVLKEKALLGRIRWEYIIIDEGHRIRNHDCKLTRTLNGFFNARHRLLLTGTPVQNK 647
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ----FTSLKGILSAFM 269
L ELWAL++F +PS+F + + F F +A ++S K +E+ L +L F+
Sbjct: 648 LPELWALLNFLLPSIFSSCDTFEQWF-NAPFATSGEKIELSEEETMLIIRRLHKVLRPFL 706
Query: 270 LRRTKQKL-----VECGHLMLPPLTEITVLQKKVYASILRKEL-------PKLLALSS-- 315
LRR K+++ + HL+ E++ LQK +Y + + L +LLA ++
Sbjct: 707 LRRLKKEVEGQLPEKAEHLL---RCEMSALQKTLYQHMQKGVLIDSNRIGGRLLANTAMQ 763
Query: 316 --RTANH----QSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFA 352
+ NH QS++ GK +LD +L KL +GHR+L+F
Sbjct: 764 LRKLCNHPFLFQSIEEECRNYWKVPEISGRDLYRVGGKFELLDRILLKLKVTGHRLLMFC 823
Query: 353 QMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVF 412
QMT + I++DFL R+Y Y RLDG+ ++++R + LY+ A ++ F+F
Sbjct: 824 QMTSLMSIMEDFLIYRQYRYLRLDGNTKSDDR----------EKLLDLYN-APQSEYFIF 872
Query: 413 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEE 472
++STR+GG+GLNL +ADTV+ ++ DWNP DKQA RAHRIGQ V + L+T +++EE
Sbjct: 873 LLSTRSGGIGLNLQSADTVVIFDSDWNPHQDKQAESRAHRIGQSREVRVLRLITVNSIEE 932
Query: 473 VIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSIIFGLHLFDPKAINNEESDDL 532
I A+ KL + V+ D+ + A L I+ G ++ + + NE DD
Sbjct: 933 KIQATAKCKLDIDKKVIQAGRFDQ--RSTGAERQQILEQIVRGANIDETE---NEFQDD- 986
Query: 533 RLSGLNSMVEKVIAMRHEQ 551
MV +++A H++
Sbjct: 987 ------EMVNQILARSHDE 999
>gi|348688524|gb|EGZ28338.1| hypothetical protein PHYSODRAFT_466564 [Phytophthora sojae]
Length = 881
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 227/729 (31%), Positives = 355/729 (48%), Gaps = 113/729 (15%)
Query: 12 KIIHDNDERDGQTPVDAAEFGVT-------AELKPHQVEGLSWLIRRYLLGVNVLLGDEM 64
+++H + R GQ P A+ T A L +Q+ GL WL+R++ G+N +LGDEM
Sbjct: 3 EVVHKLELR-GQQPTPLADQVKTQPSLLENATLHDYQLVGLRWLLRKHEQGLNPILGDEM 61
Query: 65 GLGKTLQAISFLSYLKFS---QMSP--GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVG 119
GLGKTLQ ISF++ L+ + Q P +LV+ PLSV W+ + +F P + + Y+G
Sbjct: 62 GLGKTLQVISFIAALEAAYRGQKKPRGSRYLVVAPLSVLPNWMEQFEQFAPSISTVMYIG 121
Query: 120 EREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEA 179
+ R ++ + ++Q PL V++T+Y+++L D F S+ W I+DE
Sbjct: 122 PAKDREATQKVIAASPQDQ-------PL---VVVTSYEMLLHDHEFYSKTEWEVMIMDEG 171
Query: 180 QRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTF 239
RLKNP L+ ++ +++TGTPIQN+L EL+AL+ P VF F STF
Sbjct: 172 HRLKNPKGQLHGIVSTRLRSKHMVILTGTPIQNDLEELFALLSILNPGVFNDQALFESTF 231
Query: 240 KDAVHSSSA----PKRGKIKEQFTSLKGILSAFMLRRTKQKLVEC-GHLMLPPLTEITV- 293
++ + + +R K K + + + + + + G LPPL+E+ V
Sbjct: 232 RNYFSAKAQRLDEGQRAKSKRLSKAEELMRRLLAPLLLLRTVQDVQGAFTLPPLSEMVVH 291
Query: 294 -----LQKKVYASILRKE----------------LPKLLALSSRTANHQSLQNTA----- 327
+Q+ Y ++ K L +L + NH L A
Sbjct: 292 TPMSSMQRAYYKEVIAKNAYVLNGAAKAHGSRVPLLNILPQLRKACNHPYLFPGAEPEPF 351
Query: 328 ---------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGS 378
SGKL VL +L +L GHRVLLF+Q LDI+QDFL L ++YER+DGS
Sbjct: 352 EEGSHLYENSGKLFVLHQILPRLKKEGHRVLLFSQSPPFLDIIQDFLTLESFAYERIDGS 411
Query: 379 IRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDW 438
+R +ER+ +I F + FVF+ISTRAGG+GLNL +ADTVIF + D+
Sbjct: 412 VRGKERWQSIERFRKDP------------ETFVFLISTRAGGLGLNLQSADTVIFADSDY 459
Query: 439 NPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREV 498
NPQ D QA+ RA+R+GQ + I + +TVEE I RR+ +K+R++ + ++ R
Sbjct: 460 NPQTDLQAVARAYRLGQTKPIHVIKFLCANTVEESIYRRSLKKMRMADRI--RNLARRTD 517
Query: 499 KERTAVETDDLRSII----FGLHLFDPKAINNEESDDLRLSGLNSMVEKVIAMRHEQVSG 554
+ + D +S++ FGLH +A +E D L ++ ++ R + VS
Sbjct: 518 GDGDENDDDSGKSLLDMIQFGLHRLMEEAAGQDE-DALMKPLEEEYIQHILTRRTDHVS- 575
Query: 555 KAGRKFEVNPVALLEESDLLMHES-FASATSYPDLDEASYRSWVEKFKEA-------SES 606
+AG + V L+ LL F Y E + K K+A +E+
Sbjct: 576 EAGADSDDKMVPTLKSDKLLESGGDFREENMYYFEGEDYTKVMNTKAKDAELLQKLCAEA 635
Query: 607 SSNTIAE--SGRRR-------------------SPEDKQRKLEAARRKAEEKKLAKWEAN 645
++ T + + R+R ++ RK E R+KA E+KLA+W+AN
Sbjct: 636 ANTTKRKTLTARKRYEQDDDEEEDEVDEELSAADEAEQARKREERRQKALERKLAQWKAN 695
Query: 646 GYQSLSVKT 654
L K+
Sbjct: 696 NSGRLLYKS 704
>gi|242038313|ref|XP_002466551.1| hypothetical protein SORBIDRAFT_01g009790 [Sorghum bicolor]
gi|241920405|gb|EER93549.1| hypothetical protein SORBIDRAFT_01g009790 [Sorghum bicolor]
Length = 836
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 178/510 (34%), Positives = 274/510 (53%), Gaps = 74/510 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q++G+ WLI + G+N +L D+MGLGKT+Q I FL++LK M GP++++ P
Sbjct: 271 GKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGMH-GPYMIIAP 329
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS WV+E+++F P + + Y G++ R IRR M + F +++T
Sbjct: 330 LSTLSNWVNEISRFVPSVTSIIYHGDKVARAEIRRKF---------MPKTAGPDFPIIVT 380
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+++V ++D FL+ W Y ++DE RLKN L+ ++ M +LL+TGTP+QNNL
Sbjct: 381 SFEVAMLDARFLAHYQWKYVVVDEGHRLKNSKCKLFREMK-RIPMANKLLLTGTPLQNNL 439
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ---FTSLKGILSAFMLR 271
+ELW+L++F +P +F + +F S F + S P+ + K + + L IL F+LR
Sbjct: 440 AELWSLLNFILPDIFSSHQEFESWFDFSAKGSEEPEETEEKRRVHVVSKLHAILRPFLLR 499
Query: 272 RTKQKLVECGHLMLPPLTEITV------LQKK-----------VYAS-----ILRK---- 305
R K+ + + MLP EI + +QK+ VY + +LRK
Sbjct: 500 RMKEDVEQ----MLPRKKEIIIYANMTEVQKRIQDHLVEKSFDVYLNEESDIVLRKPGIK 555
Query: 306 -ELPKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSG----------------HRV 348
+L L + H L A G + + K L G H+V
Sbjct: 556 AKLNSLCIQLRKNCAHPDLLEAAFGTTSLYPPVNKLLEQCGKFQLLDRLLTSLLARKHKV 615
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFS-VQSAIERLYSEAGGN 407
L+F+Q T+ LDIL+ +L+ + R+DGS+ EER I F+ V S++
Sbjct: 616 LIFSQWTKVLDILEYYLDSKGLGVCRIDGSVNLEERRRQIAEFNDVNSSLN--------- 666
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
VF++STRAGG+G+NL +ADT I Y+ DWNPQ+D QA+ R HRIGQ V L T
Sbjct: 667 ---VFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTRPVHVYRLATS 723
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDRE 497
H+VEE I++RA KL+L H V+G ++E
Sbjct: 724 HSVEERIIKRAFGKLKLEHVVIGKGQFEQE 753
>gi|66358754|ref|XP_626555.1| SWI/SNF related transcriptional regulator ATpase [Cryptosporidium
parvum Iowa II]
gi|46227736|gb|EAK88656.1| SWI/SNF related putative transcriptional regulator ATpase
[Cryptosporidium parvum Iowa II]
Length = 1552
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 271/490 (55%), Gaps = 65/490 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L P+Q+ G+ W++ Y ++ +L DEMGLGKT+Q I+ L+YL + + GP LV+ PLS
Sbjct: 578 LLPYQIIGVEWMLSLYNNKLHGILADEMGLGKTVQTIALLTYLYEHKDNQGPHLVVVPLS 637
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E ++P+L++L + G R +RR++ +YE + F+V LTT+
Sbjct: 638 TLPNWQKEFEIWSPELKILCFKGSRYERRSL---IYE----------MRQTKFNVCLTTF 684
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
D ++ + G L + W + I+DE RLKN S + VL + F RLL+TGTP+QN+++E
Sbjct: 685 DFIIRESGALQSMQWKHIIVDEGHRLKNSKSKFHVVLAD-FKSENRLLLTGTPLQNSITE 743
Query: 217 LWALMHFCMPSVFGTLNQFL----STFKDAVHSSSAPKRGKIKEQF--TSLKGILSAFML 270
LW+L++F +P VF ++ F F D + ++ + + + F + L IL F+L
Sbjct: 744 LWSLLNFLLPQVFHSVEDFQVWFSKPFSDLPSNEASLELSEEERLFVISRLHSILRPFLL 803
Query: 271 RRTK----QKLVECGHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRTANHQSLQNT 326
RR K Q L E ++ E+T QK VY I +K + + LSS ++S+ NT
Sbjct: 804 RRVKSDVLQDLPEKKEYIVR--MELTPWQKIVYDQIKQKAVHSM-DLSSGKIQYRSVSNT 860
Query: 327 ---------------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
S K VLD +L KL H+VL+F QMTQ +D
Sbjct: 861 IMQLRKIVNHPYLFVEEYLIEDDDIFRVSCKFEVLDRMLPKLIRFRHKVLIFCQMTQLMD 920
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL DFL+ R + RLDG++ +ER + F+ + ++ FVF++STRAG
Sbjct: 921 ILGDFLDYRGIEHHRLDGTMTIQERKEKMDEFN-----------SPDSEKFVFVLSTRAG 969
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+GLNL AADTVI ++ DWNP D QA RAHR+GQ N V + V+ VEE++++RA+
Sbjct: 970 GLGLNLQAADTVIIFDSDWNPHQDLQAQSRAHRMGQKNEVRVLRFVSISGVEELVLKRAQ 1029
Query: 480 RKLRLSHNVV 489
+KL + H ++
Sbjct: 1030 KKLEIDHKII 1039
>gi|327269727|ref|XP_003219644.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Anolis
carolinensis]
Length = 3008
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 197/539 (36%), Positives = 278/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ + +L+ +Q+EGL+WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 954 EYKINNKLREYQLEGLNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1010
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ YE + K+ +
Sbjct: 1011 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRMIQS--YEMYFKDAQGRAIKGS 1067
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1068 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1122
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + + F+ F D K +EQ L+
Sbjct: 1123 VLLTGTPLQNTVEELFSLLHFLEPSRFPSESTFMQEFGDL----------KTEEQVQKLQ 1172
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1173 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1228
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1229 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNPDSPDFQLQAMIQAAGKLVLI 1288
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1289 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRP 1348
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1349 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1397
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1398 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1456
>gi|167535609|ref|XP_001749478.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772106|gb|EDQ85763.1| predicted protein [Monosiga brevicollis MX1]
Length = 1903
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 266/503 (52%), Gaps = 72/503 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL +Q+EGL++LI ++ NV+L DEMGLGKTLQ I+F+S+LK + GPFL++ P
Sbjct: 636 GELHDYQLEGLNFLIFSWMRNRNVILADEMGLGKTLQTIAFVSWLKHTAQR-GPFLIVAP 694
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLL 153
LS W E A++ P L V+ ++G R I++ +Y K + + FDV++
Sbjct: 695 LSTCPNWEREFAQWAPDLHVVTFIGGASSREVIKQHELYTPGKTRRRR-------FDVII 747
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T ++V+L + ++ W +DE RLK+ SS L VL E R+L+TGTP+QNN
Sbjct: 748 TAWNVILSEAAVFRKVKWDLLAVDEGHRLKSRSSQLTTVL-ESCTSDFRILLTGTPLQNN 806
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L EL+ L+ + P F F+ S + KE+ +LK L MLRR
Sbjct: 807 LQELYNLLMYLNPEEF-------KEFEGRERLSDE----ETKEEIATLKPKLKKHMLRRL 855
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------LPKLLALS 314
K + + +P E+ V +Q++ Y +L K L LL
Sbjct: 856 KTDVFK----DMPQKVEVVVPAKLSSMQRRFYKELLAKNYSFLTATTQGVSSLNNLLMQL 911
Query: 315 SRTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ ANH L + A SGK ++LD++L+KL GHRVL+F+QMT+
Sbjct: 912 RKCANHPYLFDDAEPEVEDHDAMVKLLVGASGKTLLLDMMLRKLKEQGHRVLIFSQMTRM 971
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDILQD + R Y RLDG+ R I FS + DAFVF++STR
Sbjct: 972 LDILQDIMMYRGYHCCRLDGNTDILTRQEQIDEFSRPDS-----------DAFVFLLSTR 1020
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL ADT+I ++ DWNP D QAL RAHRIGQ N V+ V+ +TVEE I+RR
Sbjct: 1021 AGGLGINLTTADTIIIFDSDWNPHADLQALARAHRIGQKNLVMVYRFVSVNTVEERILRR 1080
Query: 478 AERKLRLSHNVVGDDVVDREVKE 500
A KLRL V D + E+ +
Sbjct: 1081 AREKLRLDQAVRMDKLKKSELDQ 1103
>gi|150951142|ref|XP_001387415.2| ATPase component of a four subunit chromatin remodeling complex
[Scheffersomyces stipitis CBS 6054]
gi|149388353|gb|EAZ63392.2| ATPase component of a four subunit chromatin remodeling complex
[Scheffersomyces stipitis CBS 6054]
Length = 860
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/462 (36%), Positives = 248/462 (53%), Gaps = 69/462 (14%)
Query: 64 MGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQ 123
MGLGKTLQ ISFL YL+F + GP +V+ P S D W E ++ P ++VL G+++Q
Sbjct: 1 MGLGKTLQTISFLGYLRFIKHINGPHIVITPKSTLDNWAREFNRWIPDMKVLVIQGDKDQ 60
Query: 124 RRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLK 183
R+ E ++EQ V FDV++ +Y++V+ ++ + W Y IIDEA R+K
Sbjct: 61 RQ-------ELLREQ-----VLTCKFDVIIASYEIVIREKSTFKKFDWEYIIIDEAHRIK 108
Query: 184 NPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAV 243
N S+L ++R F RLL+TGTP+QNNL ELWAL++F +P VF F D
Sbjct: 109 NEESLLSQIIR-MFHSKNRLLITGTPLQNNLRELWALLNFILPDVFADNESF-----DEW 162
Query: 244 HSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKK 297
S K + L +L F+LRR K + + L P E+ V +Q+K
Sbjct: 163 FQSDEDKNDSEDTVVSQLHKVLKPFLLRRIKADVEKS----LLPKQELNVYVKMSEMQRK 218
Query: 298 VYASILRKEL------------PKLLALS---SRTANHQSLQNTA--------------- 327
Y IL K++ +LL + + NH L A
Sbjct: 219 WYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLVYN 278
Query: 328 SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAA 387
S K+++LD LL+K G RVL+F+QM++ LDIL+D+ R++ Y R+DG +R A
Sbjct: 279 SQKMIILDQLLRKFQKEGSRVLIFSQMSRMLDILEDYCFFREFKYCRIDGQTEHADRINA 338
Query: 388 IRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQAL 447
I ++ G+D FVF+++TRAGG+G+NL +AD V+ ++ DWNPQ D QA+
Sbjct: 339 IDEYN-----------KPGSDRFVFLLTTRAGGLGINLTSADIVVLFDSDWNPQADLQAM 387
Query: 448 QRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
RAHRIGQ V VTE+ +EE ++ RA +KLRL V+
Sbjct: 388 DRAHRIGQTKQVKVFRFVTENAIEEKVLERATQKLRLDQLVI 429
>gi|302830624|ref|XP_002946878.1| hypothetical protein VOLCADRAFT_120343 [Volvox carteri f.
nagariensis]
gi|300267922|gb|EFJ52104.1| hypothetical protein VOLCADRAFT_120343 [Volvox carteri f.
nagariensis]
Length = 2539
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 179/473 (37%), Positives = 257/473 (54%), Gaps = 65/473 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+E L+W+I + N++L DEMGLGKT+Q +SF+ YL + GPFLV+ PLS
Sbjct: 579 LRDYQMESLNWMIYSWSENRNIILADEMGLGKTVQCVSFVGYLAEALQIRGPFLVVVPLS 638
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W+ E ++ P + + YVG+ R +R YE S + P F+VLLTTY
Sbjct: 639 TVPNWIREFRRWVPFVNAVVYVGDSRSREVLR--AYE-CDPASHHKSSRPHKFEVLLTTY 695
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLRE-HFLMPRRLLMTGTPIQNNLS 215
+++L D LS+I W Y ++DEA RLKN S LY L E HF +LL+TGTP+QN+L
Sbjct: 696 ELILKDAQILSRIKWAYLLVDEAHRLKNAESALYQELMEWHFK--NKLLVTGTPLQNSLK 753
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF P F T +F + + + + + L G+L +LRR +
Sbjct: 754 ELWALLHFLDPDKFPTCERFEAEYSL-----------ETADSVSGLHGVLRPHLLRRVIK 802
Query: 276 KLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSRTANHQSLQNTASG 329
+ + LPP E +T LQK+ Y IL + +L N SL + G
Sbjct: 803 DVEKS----LPPKNERILRVDMTPLQKQYYKWILTRNFKEL--------NKGSLGSHGGG 850
Query: 330 KLVVLDLL--LKKLYNSGHRVLLF--------------AQMTQTLDILQDFLELRKYSYE 373
+ +L+++ LKK N LF + M + LDI+ D++ R ++++
Sbjct: 851 HVSLLNIIGELKKCCN---HPFLFESAEENYRGSEDDKSAMVRVLDIISDYMRHRGFTHQ 907
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
RLDGS A R AA+ HF+ + + F F++STRAGG+G+NL ADTVI
Sbjct: 908 RLDGSTPAAARHAAMEHFNRPESPD-----------FAFLLSTRAGGLGINLATADTVII 956
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSH 486
++ DWNPQ D QA+ RAHRIGQ V VT +VEE I+ RA+RK+ L H
Sbjct: 957 FDSDWNPQNDLQAMSRAHRIGQTETVNIYRFVTSGSVEEDILERAKRKMVLDH 1009
>gi|166240364|ref|XP_638342.2| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
gi|165988561|gb|EAL64859.2| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
Length = 1604
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 169/501 (33%), Positives = 273/501 (54%), Gaps = 63/501 (12%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
++ + +LK +QV GL WLI Y +N +L DEMGLGKT+Q I+F+S+L
Sbjct: 613 IEQPDLMTGGKLKEYQVTGLEWLISLYTRNLNGILADEMGLGKTVQTIAFISFLYERMNV 672
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
PFLV+ PLS WVSE A+++PKL V+ Y G++++RR RT+ +
Sbjct: 673 REPFLVVAPLSTISNWVSEFARWSPKLHVIVYKGKQDERRETARTIPRNA---------- 722
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F V++T+++ ++ D+ L ++ W Y IIDE R+KN +S L LR++ RLL+
Sbjct: 723 ---FCVVITSFEYIIKDRKTLGRVHWIYIIIDEGHRIKNKNSKLSVQLRQYHSR-NRLLL 778
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QN+L ELWAL++F +P++F + + F + F +A + + E+
Sbjct: 779 TGTPLQNDLGELWALLNFLLPTIFNSADTFQNWF-NAPFQAKGKNLINVNEEESLIIINR 837
Query: 261 LKGILSAFMLRR-----------TKQKLVECGH-----LMLPPLTEITVL-----QKKVY 299
L +L F+LRR K+K+++C M L E VL K+
Sbjct: 838 LHQVLRFFLLRRLKSDVESQLPDKKEKVIKCNMSALQIAMYRSLVEYGVLPIDPDSKEGR 897
Query: 300 ASILR-KELPKLLALSSRTANHQSLQNT----------ASGKLVVLDLLLKKLYNSGHRV 348
+ L+ K ++ + NH L SGK +D +L K++ S HRV
Sbjct: 898 SGRLKMKGFNNIVKQLQKICNHPYLFKDEWDINEDLIRTSGKFDTMDQILTKMHASKHRV 957
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F QMT+ +++++++ L+++++ RLDGS + EER + ++ +
Sbjct: 958 LIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHLVVEWNRPDS-----------P 1006
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
++F++ST AGG+G+NL ADTVI ++ DWNPQ+D QA R HRIGQ N V L++ +
Sbjct: 1007 FWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSVSVFRLISAN 1066
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
++EE I+ RA KL + ++
Sbjct: 1067 SIEEKILGRATDKLEIDAKII 1087
>gi|297791319|ref|XP_002863544.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp.
lyrata]
gi|297309379|gb|EFH39803.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp.
lyrata]
Length = 2251
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 184/504 (36%), Positives = 265/504 (52%), Gaps = 67/504 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L PHQ+E L+WL R + NV+L DEMGLGKT+ A +FLS L F P LVL PLS
Sbjct: 692 LFPHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLS 751
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W+SE + + P L V+ Y G + R IR + + F+VLLTTY
Sbjct: 752 TMPNWLSEFSLWAPLLNVVEYHGSAKGRAIIRDYEWRAKNPTGTTKKPTSYKFNVLLTTY 811
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++VL D L +PW ++DE RLKN S L+++L F R+L+TGTP+QNN+ E
Sbjct: 812 EMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNT-FSFQHRVLLTGTPLQNNIGE 870
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
++ L++F P F +L+ F F D + E+ LK +++ MLRR K+
Sbjct: 871 MYNLLNFLQPLSFPSLSSFEERFHDLTSA----------EKVEELKKLVAPHMLRRLKKD 920
Query: 277 LVECGHLMLPPLTE------ITVLQKKVYASILRKE------LPKLLALSS--------- 315
++ +PP TE +T +Q + Y ++L K + K +A S
Sbjct: 921 AMQ----NIPPKTERMVPVELTSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLR 976
Query: 316 RTANH-----------------QSLQNTASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH ++ AS KL +L +LK L GHRVL+F+QMT+ L
Sbjct: 977 KVCNHPYLIPGTEPESGSLEFLHDMRIKASAKLTLLHSMLKVLQKEGHRVLIFSQMTKLL 1036
Query: 359 DILQDFL--ELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
DIL+D+L E ++ER+DGS+ +R AAI F+ + FVF++ST
Sbjct: 1037 DILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQD------------KNRFVFLLST 1084
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RA G+G+NL ADTVI Y+ D+NP D QA+ RAHRIGQ +L LV +VEE I++
Sbjct: 1085 RACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERILQ 1144
Query: 477 RAERKLRLSHNVVGDDVVDREVKE 500
A++KL L V +E ++
Sbjct: 1145 LAKKKLMLDQLFVNKSGSQKEFED 1168
>gi|373432617|ref|NP_078844.2| chromodomain-helicase-DNA-binding protein 1-like isoform 3 [Homo
sapiens]
gi|410171390|ref|XP_003960260.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
6 [Homo sapiens]
gi|410171392|ref|XP_003960261.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
7 [Homo sapiens]
Length = 784
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 218/624 (34%), Positives = 307/624 (49%), Gaps = 112/624 (17%)
Query: 105 MAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQG 164
M +F P L + Y G++E+R +++ + K++S+ F VLLTTY++ L D
Sbjct: 1 MQRFAPGLSCVTYAGDKEERACLQQDL----KQESR--------FHVLLTTYEICLKDAS 48
Query: 165 FLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFC 224
FL PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L EL++L+ F
Sbjct: 49 FLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQELYSLLSFV 107
Query: 225 MPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGH 282
P +F + F+ ++D S E + L +L F+LRR K ++
Sbjct: 108 EPDLFSKEEVGDFIQRYQDIEKES---------ESASELHKLLQPFLLRRVKAEVA---- 154
Query: 283 LMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT---------- 326
LP TE+ + LQKK Y +IL K+L A + TA LQN
Sbjct: 155 TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENETAKKVKLQNILSQLRKCVDH 211
Query: 327 --------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLE 366
ASGKL +LD LL LY+ GHRVLLF+QMTQ LDILQD+++
Sbjct: 212 PYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMD 271
Query: 367 LRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLV 426
R YSYER+DGS+R EER AI++F G FVF++STRAGGVG+NL
Sbjct: 272 YRGYSYERVDGSVRGEERHLAIKNF-------------GQQPIFVFLLSTRAGGVGMNLT 318
Query: 427 AADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSH 486
AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A KL+L++
Sbjct: 319 AADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTN 378
Query: 487 NVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNEESDDLRLSGLNSMVEKV 544
++ ++ A L I+ FGL L + +E D + G + V
Sbjct: 379 MIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETKDGQWV 438
Query: 545 IAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEAS 604
G ++ N + L E D S S+ L ++ +EK +
Sbjct: 439 SDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQ-KTLLEKASQEG 497
Query: 605 ESSSNT-------IAESGRRR----SP---EDKQRK-----------LEAARRKAEE--- 636
S N + E +R SP ED+Q+K +E +R+ EE
Sbjct: 498 RSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEH 557
Query: 637 -KKLAKWEANGYQSLSVKTPVCSP 659
KK+A WE+N YQS + + P
Sbjct: 558 KKKMAWWESNNYQSFCLPSEESEP 581
>gi|328868264|gb|EGG16642.1| chromo domain-containing protein [Dictyostelium fasciculatum]
Length = 2319
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 184/512 (35%), Positives = 272/512 (53%), Gaps = 79/512 (15%)
Query: 25 PVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQM 84
P +F + LK QVEG WL + + LL DEMGLGKT+Q+I+FL+YL S
Sbjct: 577 PSLVPKFKGSLSLKEFQVEGFLWLSYNWYHERSSLLADEMGLGKTIQSIAFLTYLSQSVG 636
Query: 85 SPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNV 144
GPF+V+ PLS W E+ K+T + VL + G +E R ++ YE ++ +
Sbjct: 637 IKGPFMVVAPLSTLGNWQKEILKWT-DMRVLVFYGTQETRAFQKK--YEWKRKDKGVYQ- 692
Query: 145 SPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLL 204
F++LLTTY+ V+ + L +I W ++DE R+KN S + + L+ ++
Sbjct: 693 ----FEILLTTYETVMAEHQDLVKINWRALVLDEGHRIKNTQSKVLSKLKS-IKTEHSVI 747
Query: 205 MTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGI 264
+TGTP+QN++ ELW +++F P F + QFL F D S Q L I
Sbjct: 748 LTGTPLQNDMKELWTMLNFLDPDKFASSTQFLDEFSDLKEES----------QVQRLHQI 797
Query: 265 LSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE------------ 306
L+ ++LRR K+ + L +P E + +QK Y +IL K
Sbjct: 798 LAPYLLRRMKEDV----ELSIPIKEETVIQVELSSIQKTYYRAILEKNREFLARGVKSKS 853
Query: 307 -LPKLLALS---SRTANHQSL----QNT-------------------ASGKLVVLDLLLK 339
LPKL + + NH L ++T +S KLV++D LL+
Sbjct: 854 NLPKLTNIMIQIRKVCNHPFLIPGAEDTIIRQEKLTTDEQIAELLIRSSSKLVLVDKLLQ 913
Query: 340 KLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIER 399
+L GHRVL+F+QM ++L+IL+D+L R+YSYERLDGS+ + R A+I F Q +
Sbjct: 914 RLKKEGHRVLIFSQMVESLNILEDYLHYREYSYERLDGSVSSVLRQASIERFMDQES--- 970
Query: 400 LYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV 459
D FVF++STR+GGVG+NL +ADTVI ++ DWNPQ D QA R HRIGQ ++V
Sbjct: 971 --------DRFVFLLSTRSGGVGINLTSADTVILFDSDWNPQSDLQAQARCHRIGQTSNV 1022
Query: 460 LSINLVTEHTVEEVIMRRAERKLRLSHNVVGD 491
L+T +T E+ + A +KL L H V+ +
Sbjct: 1023 KVYRLITRNTYEQYLFEVATKKLLLDHIVLNN 1054
>gi|18400745|ref|NP_565587.1| CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana]
gi|75193642|sp|Q9S775.1|PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE;
AltName: Full=Protein GYMNOS
gi|6318930|gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE [Arabidopsis thaliana]
gi|6478518|gb|AAF13875.1|AF185577_1 chromatin remodeling factor CHD3 [Arabidopsis thaliana]
gi|330252572|gb|AEC07666.1| CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana]
Length = 1384
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 189/565 (33%), Positives = 286/565 (50%), Gaps = 94/565 (16%)
Query: 6 RLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMG 65
R + + + H + RD Q EF + L P+Q+EGL++L + +V+L DEMG
Sbjct: 243 RTRRSKDVDHKRNPRDFQQFDHTPEF-LKGLLHPYQLEGLNFLRFSWSKQTHVILADEMG 301
Query: 66 LGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRR 125
LGKT+Q+I+ L+ L + P LV+ PLS W E A + P++ V+ Y G + R
Sbjct: 302 LGKTIQSIALLASLFEENLIP--HLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARA 359
Query: 126 NIRRTMY--------EHVKEQSQMSNVSP---LPFDVLLTTYDVVLMDQGFLSQIPWCYT 174
IR + K+ Q+S+ S + FDVLLT+Y+++ +D L I W
Sbjct: 360 VIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECM 419
Query: 175 IIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQ 234
I+DE RLKN S L++ L + + R+L+TGTP+QNNL EL+ LMHF FG+L +
Sbjct: 420 IVDEGHRLKNKDSKLFSSLTQ-YSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEE 478
Query: 235 FLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV- 293
F FKD +EQ + L +L+ +LRR K+ +++ +PP E+ +
Sbjct: 479 FQEEFKDINQ----------EEQISRLHKMLAPHLLRRVKKDVMK----DMPPKKELILR 524
Query: 294 -----LQKKVYASILRKELPKLLALSSRTANHQSLQNT---------------------- 326
LQK+ Y +I + L+ + SL N
Sbjct: 525 VDLSSLQKEYYKAIFTRNYQ---VLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIH 581
Query: 327 -----------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERL 375
+ GKL +LD ++ KL GHRVL++ Q LD+L+D+ +K+ YER+
Sbjct: 582 DANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERI 641
Query: 376 DGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYE 435
DG + ER I F+ +++ + F F++STRAGG+G+NL ADTVI Y+
Sbjct: 642 DGKVGGAERQIRIDRFNAKNS-----------NKFCFLLSTRAGGLGINLATADTVIIYD 690
Query: 436 QDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG----- 490
DWNP D QA+ RAHR+GQ N V+ L+ T+EE +M+ ++K+ L H VVG
Sbjct: 691 SDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQ 750
Query: 491 -------DDVVDREVKERTAVETDD 508
DD++ KE A E D+
Sbjct: 751 NINQEELDDIIRYGSKELFASEDDE 775
>gi|449455537|ref|XP_004145509.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like
[Cucumis sativus]
Length = 1474
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 190/541 (35%), Positives = 278/541 (51%), Gaps = 89/541 (16%)
Query: 28 AAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPG 87
+ +F L P+Q+EGL++L + +V+L DEMGLGKT+Q+I+FL+ L ++P
Sbjct: 277 SPQFLSGGTLHPYQLEGLNFLRYSWSKQTHVILADEMGLGKTIQSIAFLASLYEENIAP- 335
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY--------EHVKEQS 139
LV+ PLS W E A + P + V+ YVG + R IR + K+
Sbjct: 336 -HLVVAPLSTLRNWEREFATWAPHMNVVMYVGTAQARTVIREYEFYFPKNHKKVKKKKSG 394
Query: 140 QM---SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREH 196
Q+ S + FDVLLT+Y+++ D G L I W I+DE RLKN S L++ L++
Sbjct: 395 QIVSESKQDRIKFDVLLTSYEMINFDVGTLKPIKWQSLIVDEGHRLKNKDSKLFSSLKQ- 453
Query: 197 FLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKE 256
F R+L+TGTP+QNNL EL+ LMHF F +L +F F+D +E
Sbjct: 454 FSSSLRVLLTGTPLQNNLDELFMLMHFLDAGKFASLEEFQEEFRDINQ----------EE 503
Query: 257 QFTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRK----- 305
Q L +L+ +LRR K+ +++ LPP E++ QK+ Y +IL +
Sbjct: 504 QILRLHRMLAPHLLRRVKKDVMK----DLPPKKELILRVELSSKQKEYYKAILTRNYQLL 559
Query: 306 ---------------ELPKLLA-----------LSSRTANHQSLQNTASGKLVVLDLLLK 339
EL KL + ++ L T SGKL +LD ++
Sbjct: 560 TRRGGAQISLINVVMELRKLCCHAYMLEGVEPDIEDPEEAYKQLLET-SGKLHLLDKMMV 618
Query: 340 KLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIER 399
+L GHRVL++ Q LD+L+D+ +K+ YER+DG + ER I F+
Sbjct: 619 RLKEQGHRVLIYTQFQHMLDLLEDYCSYKKWQYERIDGKVCGAERQIRIDRFN------- 671
Query: 400 LYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV 459
A + F F++STRAGG+G+NL ADTVI Y+ DWNP D QA+ RAHR+GQ N V
Sbjct: 672 ----AKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKV 727
Query: 460 LSINLVTEHTVEEVIMRRAERKLRLSHNVVG------------DDVVDREVKERTAVETD 507
+ LVT T+EE +M+ ++K+ L H VVG DD++ KE A E D
Sbjct: 728 MIYRLVTRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGSKELFADEND 787
Query: 508 D 508
+
Sbjct: 788 E 788
>gi|373432615|ref|NP_001243265.1| chromodomain-helicase-DNA-binding protein 1-like isoform 2 [Homo
sapiens]
gi|410171394|ref|XP_003960262.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
8 [Homo sapiens]
Length = 797
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 218/623 (34%), Positives = 307/623 (49%), Gaps = 112/623 (17%)
Query: 106 AKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGF 165
A+F P L + Y G++E+R +++ + K++S+ F VLLTTY++ L D F
Sbjct: 15 ARFAPGLSCVTYAGDKEERACLQQDL----KQESR--------FHVLLTTYEICLKDASF 62
Query: 166 LSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCM 225
L PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L EL++L+ F
Sbjct: 63 LKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQELYSLLSFVE 121
Query: 226 PSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHL 283
P +F + F+ ++D S E + L +L F+LRR K ++
Sbjct: 122 PDLFSKEEVGDFIQRYQDIEKES---------ESASELHKLLQPFLLRRVKAEVA----T 168
Query: 284 MLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT----------- 326
LP TE+ + LQKK Y +IL K+L A + TA LQN
Sbjct: 169 ELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENETAKKVKLQNILSQLRKCVDHP 225
Query: 327 -------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLEL 367
ASGKL +LD LL LY+ GHRVLLF+QMTQ LDILQD+++
Sbjct: 226 YLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDY 285
Query: 368 RKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVA 427
R YSYER+DGS+R EER AI++F G FVF++STRAGGVG+NL A
Sbjct: 286 RGYSYERVDGSVRGEERHLAIKNF-------------GQQPIFVFLLSTRAGGVGMNLTA 332
Query: 428 ADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHN 487
ADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A KL+L++
Sbjct: 333 ADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNM 392
Query: 488 VVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNEESDDLRLSGLNSMVEKVI 545
++ ++ A L I+ FGL L + +E D + G + V
Sbjct: 393 IIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETKDGQWVS 452
Query: 546 AMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASE 605
G ++ N + L E D S S+ L ++ +EK +
Sbjct: 453 DALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQ-KTLLEKASQEGR 511
Query: 606 SSSNT-------IAESGRRR----SP---EDKQRK-----------LEAARRKAEE---- 636
S N + E +R SP ED+Q+K +E +R+ EE
Sbjct: 512 SLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHK 571
Query: 637 KKLAKWEANGYQSLSVKTPVCSP 659
KK+A WE+N YQS + + P
Sbjct: 572 KKMAWWESNNYQSFCLPSEESEP 594
>gi|321468122|gb|EFX79109.1| hypothetical protein DAPPUDRAFT_319863 [Daphnia pulex]
Length = 4355
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 186/505 (36%), Positives = 262/505 (51%), Gaps = 86/505 (17%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+EGL+WL + G N +L DEMGLGKT+Q+++F+ + + GPFLV+ PLS
Sbjct: 1701 LREYQLEGLNWLSFSWFNGRNCILADEMGLGKTIQSLAFVESVHRLGIR-GPFLVIAPLS 1759
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTM---YEHVKEQSQMSNVSPL-PFDVL 152
W E +T L ++ Y G N RTM YE + S+ + + + F+VL
Sbjct: 1760 TIPNWQREFETWT-NLNIIVYHGS-----NPSRTMLQEYEFHYKDSKGNQIKEMYKFNVL 1813
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TT+++++ D L ++PW +IDEA RLKN + L LR M R+L++GTP+QN
Sbjct: 1814 ITTFEMIISDCMELREVPWRLCVIDEAHRLKNKNCKLLEGLR-LLQMEHRVLLSGTPLQN 1872
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
N+SEL++L++F P+ F + F F D K +Q L+ +L MLRR
Sbjct: 1873 NISELYSLLNFLEPAQFASSEDFTRDFGDL----------KSDDQVQKLQALLKPMMLRR 1922
Query: 273 TKQKLVECGHLMLPPL------TEITVLQKKVYASILRKELPKLLALSSRTANHQSLQNT 326
K+ + + L P E+T +QKK Y IL + L + AN +L NT
Sbjct: 1923 LKEDVEKS----LAPKEETIVEVELTNMQKKYYRGILERNF-SFLTKGTTNANVPNLMNT 1977
Query: 327 ------------------------------------------ASGKLVVLDLLLKKLYNS 344
+SGKLV++D LL KL
Sbjct: 1978 MMELRKCCIHPYLLNGAEEQIQYEMKVSHTSDPDLHHKALIQSSGKLVLVDKLLPKLKAD 2037
Query: 345 GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEA 404
GHRVL+F+QM + LDIL+D+L RKY YERLDG IR R AAI + +
Sbjct: 2038 GHRVLIFSQMVRCLDILEDYLIYRKYPYERLDGRIRGNMRQAAIDRYCKPDS-------- 2089
Query: 405 GGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINL 464
D FVF++ T+AGG+G+NL AADTVI Y+ DWNPQ D QA R HRIGQ V L
Sbjct: 2090 ---DRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQKKMVKIYRL 2146
Query: 465 VTEHTVEEVIMRRAERKLRLSHNVV 489
+T +T E + +A KL L V+
Sbjct: 2147 LTRNTYEREMFDKASLKLGLDKAVL 2171
>gi|326512362|dbj|BAJ99536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 826
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 281/526 (53%), Gaps = 73/526 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q++G+ WLI + G+N +L D+MGLGKT+Q I+FL++LK + + GP++V+ P
Sbjct: 262 GKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH-GPYMVIAP 320
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W++E+ +FTP L L Y G++ R +RR + V P F +++T
Sbjct: 321 LSTLSNWLNELMRFTPSLNGLIYHGDKAARTELRR--------KYMPKTVGP-DFPIIIT 371
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + D FL+ W Y ++DE RLKN L LR M +LL+TGTP+QNNL
Sbjct: 372 SYEMAMFDAKFLANYKWKYVVVDEGHRLKNTKCKLLRELR-RIPMDNKLLLTGTPLQNNL 430
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ----FTSLKGILSAFML 270
+ELW+L++F +P +F + +F S F + + + +++ + L IL F+L
Sbjct: 431 AELWSLLNFILPDIFSSHEEFESWFDFSAKADEGLEEETDEKKRVLIVSKLHAILRPFLL 490
Query: 271 RRTKQKLVECGHLMLPPLTEITVL------QKKVYASIL--------------------- 303
RR K+ + MLP EI + QK++ + ++
Sbjct: 491 RRMKENVEH----MLPRKKEIIIYANMTEHQKQIQSHLIEETFDDYLHESADIVLRRPGI 546
Query: 304 RKELPKLLALSSRTANHQSLQNTA----------------SGKLVVLDLLLKKLYNSGHR 347
+ +L LL + H L ++A GK +LD LL L H+
Sbjct: 547 KTKLNNLLIQLRKNCGHPDLFHSAFDSNSLYPPVDKLMEQCGKFQLLDRLLDALIKRNHK 606
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+Q T+ LDIL +L + R+DGS++ E+R I F+ ++ G N
Sbjct: 607 VLIFSQWTKILDILDYYLSEKGLKVCRIDGSVKLEDRRNQIAAFNDLNS--------GMN 658
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
VF++STRAGG+G+NL +ADT I Y+ DWNPQ+D QA+ R HRIGQ V L T
Sbjct: 659 ---VFILSTRAGGLGINLTSADTCILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLATS 715
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
++VE I+++A KL+L H V+G ++ + A++ +L +++
Sbjct: 716 NSVEGRIIKKAFGKLKLEHVVIGKGQFQQDAAKPNALDEGELLALL 761
>gi|397475644|ref|XP_003809242.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
2 [Pan paniscus]
Length = 783
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 217/624 (34%), Positives = 307/624 (49%), Gaps = 112/624 (17%)
Query: 105 MAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQG 164
M +F P L + Y G++E+R +++ + K++S+ F VLLTTY++ L D
Sbjct: 1 MQRFAPGLSCVTYAGDKEERACLQQDL----KQESR--------FHVLLTTYEICLKDAS 48
Query: 165 FLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFC 224
FL PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L EL++L+ F
Sbjct: 49 FLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQELYSLLSFV 107
Query: 225 MPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGH 282
P +F + F+ ++D S E + L +L F+LRR K ++
Sbjct: 108 EPDLFSKEEVGDFIQRYQDIEKES---------ESASELHKLLQPFLLRRVKAEVA---- 154
Query: 283 LMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT---------- 326
LP TE+ + LQKK Y +IL K+L A + TA LQN
Sbjct: 155 TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENETAKKVKLQNILSQLRKCVDH 211
Query: 327 --------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLE 366
ASGKL +LD LL LY+ GHRVLLF+QMTQ LDILQD+++
Sbjct: 212 PYLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMD 271
Query: 367 LRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLV 426
R YSYER+DGS+R EER AI++F G F+F++STRAGGVG+NL
Sbjct: 272 YRGYSYERVDGSVRGEERHLAIKNF-------------GQQPIFIFLLSTRAGGVGMNLT 318
Query: 427 AADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSH 486
AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A KL+L++
Sbjct: 319 AADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTN 378
Query: 487 NVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNEESDDLRLSGLNSMVEKV 544
++ ++ A L I+ FGL L + +E D + G + V
Sbjct: 379 MIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTIDEIDLESILGETKDGQWV 438
Query: 545 IAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEAS 604
G ++ N + L E D S S+ L ++ +EK +
Sbjct: 439 SDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQ-KTLLEKTSQEG 497
Query: 605 ESSSNT-------IAESGRRR----SP---EDKQRK-----------LEAARRKAEE--- 636
S N + E +R SP ED+Q+K +E +R+ EE
Sbjct: 498 RSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEH 557
Query: 637 -KKLAKWEANGYQSLSVKTPVCSP 659
KK+A WE+N YQS + + P
Sbjct: 558 KKKMAWWESNNYQSFCLPSEESEP 581
>gi|302771908|ref|XP_002969372.1| hypothetical protein SELMODRAFT_440815 [Selaginella moellendorffii]
gi|300162848|gb|EFJ29460.1| hypothetical protein SELMODRAFT_440815 [Selaginella moellendorffii]
Length = 1544
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 268/499 (53%), Gaps = 82/499 (16%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+EGL++L+ + + NV+L DEMGLGKT+Q++S L YL+++ GPFLV+ P
Sbjct: 453 GKLRDYQLEGLNFLVNGWRMNTNVILADEMGLGKTVQSLSMLGYLQYNLEILGPFLVVVP 512
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W E K+ P + VL YVG R ++ YE + F+ L+T
Sbjct: 513 LSTIANWAKEFRKWLPNMNVLVYVGNVASREMCQK--YEFFTASGRAK------FNTLIT 564
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++VL D+ LSQ W + ++DEA RLKN + LY L + F ++L+TGTP+QNN+
Sbjct: 565 TYELVLKDKDVLSQFKWDFLMVDEAHRLKNNEAALYTELMK-FSAKNKVLVTGTPLQNNV 623
Query: 215 SELWALMHFCMPSVFGTLNQF--LSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
ELWAL+HF P F + + L +F +A + L L +LRR
Sbjct: 624 EELWALLHFLDPIKFRNKDDYKNLVSFNEA--------------ELARLHAELRPHLLRR 669
Query: 273 TKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELPKL--------------LA 312
+ + + LPP E++ LQK+ Y IL + L +
Sbjct: 670 VIKDVEKS----LPPKIERILRVEMSPLQKQYYKWILERNFSDLNKGVRGNQVSLLNIVV 725
Query: 313 LSSRTANHQSLQNTA----------------------SGKLVVLDLLLKKLYNSGHRVLL 350
+ NH L +A SGKLV+LD LL +L +GHRVL+
Sbjct: 726 ELKKCCNHPFLFESADHGYGANATMTDNSRVQRVVLSSGKLVLLDKLLVRLKETGHRVLI 785
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM + LDIL D+L LR + ++RLDGS + R A+ HF+ A G++ F
Sbjct: 786 FSQMVKMLDILADYLRLRGFQFQRLDGSTKHHLRQQAMEHFN-----------APGSEDF 834
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
F++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V VT +V
Sbjct: 835 CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQEFVVNIYRFVTCRSV 894
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE I+ RA++K+ L H V+
Sbjct: 895 EEDILERAKKKMVLDHLVI 913
>gi|123416804|ref|XP_001304972.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
gi|121886460|gb|EAX92042.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
Length = 1107
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 265/490 (54%), Gaps = 63/490 (12%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +LK +Q++GL WL+ YL +N +L DEMGLGKT+Q+I+ L++L ++ GP L+
Sbjct: 387 LNGQLKDYQLKGLQWLVSLYLSHLNGILADEMGLGKTIQSIALLAWLMENRKDYGPHLIC 446
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVG---EREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
PL+ W SE K+ P V++Y G ER+Q+ N + SNV
Sbjct: 447 GPLTTLSNWYSEFNKWLPAFNVVQYTGTPAERKQKANSYLV---------RGSNV----- 492
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
+V+LT+Y+ D+ L ++ + Y IIDEA RLKN L L + RLL+TGTP
Sbjct: 493 NVVLTSYEFATRDKATLGRLDYSYLIIDEAHRLKNDQGKLGQAL-SAYKCGNRLLLTGTP 551
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQF---TSLKGILS 266
+QNN ELW+L++F +P++F +QF F + +EQF + L +L
Sbjct: 552 LQNNPRELWSLLNFVLPNIFNDHSQFEEWFSAPFSKAGGDVSLTGEEQFLVISQLHNVLR 611
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITVL------QKKVYASILR-----------KELPK 309
F+ RRT ++ LP + E +L QK VY +++ + L
Sbjct: 612 PFLFRRTTAQVA----TELPKMRECKLLCAMSAWQKVVYNTLVTESSVVHSMDHIQRLDN 667
Query: 310 LLALSSRTANHQSL-QNT---------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L +T SGK VLD +L KL +GHR+L+F+QMT+ L
Sbjct: 668 TTMQLRKCCNHPYLFYDTWFVNLDLVRTSGKCEVLDRILPKLKATGHRILIFSQMTEVLT 727
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
+LQD L R Y Y RLDG+ ++++R I F+ + + + F+F++STRAG
Sbjct: 728 LLQDLLTWRDYKYLRLDGNTKSDQRQQLIADFNKEDS-----------EYFIFLLSTRAG 776
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+GLNL ADTVI Y+ DWNP D+QA R HRIGQ VL I+LVT ++EE ++ RA+
Sbjct: 777 GLGLNLQTADTVILYDNDWNPFADQQARSRVHRIGQEKPVLVISLVTAGSIEERVVERAD 836
Query: 480 RKLRLSHNVV 489
K + + ++
Sbjct: 837 DKKTVENKII 846
>gi|444720770|gb|ELW61544.1| Chromodomain-helicase-DNA-binding protein 7 [Tupaia chinensis]
Length = 2574
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 192/533 (36%), Positives = 275/533 (51%), Gaps = 83/533 (15%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL Y + + GPF
Sbjct: 461 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPF 519
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSPLP 148
LV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 520 LVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGSYK 576
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F ++TT++++L D L IPW +IDEA RLKN + L L+ + ++L+TGT
Sbjct: 577 FHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLK-MMDLEHKVLLTGT 635
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QN + EL++L+HF PS F + F+ F D K +EQ L+ IL
Sbjct: 636 PLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQAILKPM 685
Query: 269 MLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE------------LPKL 310
MLRR K+ + + L P E+T +QKK Y +IL K +P L
Sbjct: 686 MLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNL 741
Query: 311 LALS---SRTANHQSLQN---------------------------TASGKLVVLDLLLKK 340
L + NH L N A+GKLV++D LL K
Sbjct: 742 LNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPK 801
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
L GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS +
Sbjct: 802 LKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDS---- 857
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIGQ V
Sbjct: 858 -------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVK 910
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 911 IYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 963
>gi|302774573|ref|XP_002970703.1| hypothetical protein SELMODRAFT_411494 [Selaginella moellendorffii]
gi|300161414|gb|EFJ28029.1| hypothetical protein SELMODRAFT_411494 [Selaginella moellendorffii]
Length = 1538
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 186/499 (37%), Positives = 268/499 (53%), Gaps = 82/499 (16%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L+ +Q+EGL++L+ + + NV+L DEMGLGKT+Q++S L YL+++ GPFLV+ P
Sbjct: 453 GKLRDYQLEGLNFLVNGWRMNTNVILADEMGLGKTVQSLSMLGYLQYNLEILGPFLVVVP 512
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W E K+ P + VL YVG R ++ YE + F+ L+T
Sbjct: 513 LSTIANWAKEFRKWLPNMNVLVYVGNVASREMCQK--YEFFTASGRAK------FNTLIT 564
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY++VL D+ LSQ W + ++DEA RLKN + LY L + F ++L+TGTP+QNN+
Sbjct: 565 TYELVLKDKDVLSQFKWDFLMVDEAHRLKNNEAALYTELMK-FSAKNKVLVTGTPLQNNV 623
Query: 215 SELWALMHFCMPSVFGTLNQF--LSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
ELWAL+HF P F + + L +F +A + L L +LRR
Sbjct: 624 EELWALLHFLDPIKFRNKDDYKNLVSFNEA--------------ELARLHAELRPHLLRR 669
Query: 273 TKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELPKL--------------LA 312
+ + + LPP E++ LQK+ Y IL + L +
Sbjct: 670 VIKDVEKS----LPPKIERILRVEMSPLQKQYYKWILERNFSDLNKGVRGNQVSLLNIVV 725
Query: 313 LSSRTANHQSLQNTA----------------------SGKLVVLDLLLKKLYNSGHRVLL 350
+ NH L +A SGKLV+LD LL +L +GHRVL+
Sbjct: 726 ELKKCCNHPFLFESADHGYGANATMTDNSRVQRVVLSSGKLVLLDKLLVRLKETGHRVLI 785
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM + LDIL D+L LR + ++RLDGS + R A+ HF+ A G++ F
Sbjct: 786 FSQMVKMLDILADYLRLRGFQFQRLDGSTKHHLRQQAMEHFN-----------APGSEDF 834
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
F++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ V VT +V
Sbjct: 835 CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQEFVVNIYRFVTCRSV 894
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE I+ RA++K+ L H V+
Sbjct: 895 EEDILERAKKKMVLDHLVI 913
>gi|42567315|ref|NP_194918.2| putative chromatin remodeling factor [Arabidopsis thaliana]
gi|332660576|gb|AEE85976.1| putative chromatin remodeling factor [Arabidopsis thaliana]
Length = 1202
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/519 (35%), Positives = 271/519 (52%), Gaps = 81/519 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+T L +Q+EGL++L + NV+L DEMGLGKT+Q+I+FL+ L +S P LV+
Sbjct: 221 LTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEENLS--PHLVV 278
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E A + P + V+ Y G+ E R ++EH + S FDVL
Sbjct: 279 APLSTIRNWEREFATWAPHMNVVMYTGDSE----ARDVIWEH---EFYFSEGRKSKFDVL 331
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY++V LS I W IIDE RLKN S LY+ L + F +L+TGTP+QN
Sbjct: 332 LTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQ-FTSKHIVLLTGTPLQN 390
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL+EL+ALMHF FG+L +F K+ EQ + L +L+ +LRR
Sbjct: 391 NLNELFALMHFLDADKFGSLEKFQDINKE--------------EQISRLHQMLAPHLLRR 436
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRK-----------ELPKLLALSS 315
K+ +++ +PP E+ + QK+VY +++ ++ +L
Sbjct: 437 LKKDVLKDK---VPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAKISNVLMKLR 493
Query: 316 RTANHQSLQNT-----------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ +H L ASGKL +LD ++ KL GHRVL++ Q TL
Sbjct: 494 QVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTL 553
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
+L+D+ + ++YER+DG I ER I F+ +++ + F F++STRA
Sbjct: 554 YLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENS-----------NRFCFLLSTRA 602
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL ADTVI Y+ DWNP D QA+ R HR+GQ N V+ L+ + TVEE +M
Sbjct: 603 GGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEIT 662
Query: 479 ERKLRLSHNVVG---------DDVVDREVKERTAVETDD 508
+ K+ L H VVG DD++ KE + E D+
Sbjct: 663 KNKMLLEHLVVGKQHLCQDELDDIIKYGSKELFSEENDE 701
>gi|395729959|ref|XP_003775639.1| PREDICTED: chromodomain helicase DNA binding protein 1-like [Pongo
abelii]
Length = 785
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 221/634 (34%), Positives = 307/634 (48%), Gaps = 132/634 (20%)
Query: 105 MAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQG 164
M +F P L + Y G++E+R +++ + K++S+ F VLLTTY++ L D
Sbjct: 1 MQRFAPGLSCVTYAGDKEERACLQQDL----KQESR--------FHVLLTTYEICLKDAS 48
Query: 165 FLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFC 224
FL PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L EL++L+ F
Sbjct: 49 FLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQELYSLLSFV 107
Query: 225 MPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGH 282
P +F + F+ ++D S E + L +L F+LRR K ++
Sbjct: 108 EPDLFSKEEVGDFIQRYQDIEKES---------ESASELHKLLQPFLLRRVKAEVA---- 154
Query: 283 LMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT---------- 326
LP TE+ + LQKK Y +IL K+L A + A LQN
Sbjct: 155 TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENEMAKKVKLQNILSQLRKCVDH 211
Query: 327 --------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLE 366
ASGKL +LD LL LY+ GHRVLLF+QMTQ LDILQD+++
Sbjct: 212 PYLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMD 271
Query: 367 LRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLV 426
R YSYER+DGS+R EER AI++F G FVF++STRAGGVG+NL
Sbjct: 272 YRGYSYERVDGSVRGEERHLAIKNF-------------GQQPIFVFLLSTRAGGVGMNLT 318
Query: 427 AADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSH 486
AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A KL+L++
Sbjct: 319 AADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTN 378
Query: 487 NVVGDDVVDREVKERTAVETDDLRSII-FGLHLF-----------DPKAINNEESDDLRL 534
++ ++ A L I+ FGL D ++I E D +
Sbjct: 379 MIIEGGHFTLGAQKPAADADFQLSEILKFGLDKLLASEGSTMDEIDLESILGETKDGQWV 438
Query: 535 SGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYR 594
S E EQ GK N + L E D S S+ L +
Sbjct: 439 SDALPAAE---GGSREQEEGK-------NHMYLFEGKDYSKEPSKEDRKSFEQLVNLQ-K 487
Query: 595 SWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK-----------LEA 629
+ +EK + S N + E +R SP ED+Q+K +E
Sbjct: 488 TLLEKTSQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEE 547
Query: 630 ARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+R+ EE KK+A WE+N YQS + + P
Sbjct: 548 KKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 581
>gi|431894397|gb|ELK04197.1| Chromodomain-helicase-DNA-binding protein 6 [Pteropus alecto]
Length = 1543
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 429 ESLQVLPEIKHVERPASDAWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 488
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 489 EMGLGKTIQSITFLSEIFFRGIH-GPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 546
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 547 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 604
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 605 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 663
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 664 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 709
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQNT-------------- 326
KK Y +IL K +P L+ + NH L N
Sbjct: 710 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 769
Query: 327 -------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 770 SDAPDFQLQAMIHAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 829
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 830 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 878
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 879 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 936
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 937 INRKGSTNGVQQLSKMEVEDL 957
>gi|334187075|ref|NP_001190884.1| putative chromatin remodeling factor [Arabidopsis thaliana]
gi|332660577|gb|AEE85977.1| putative chromatin remodeling factor [Arabidopsis thaliana]
Length = 1161
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 185/519 (35%), Positives = 271/519 (52%), Gaps = 81/519 (15%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+T L +Q+EGL++L + NV+L DEMGLGKT+Q+I+FL+ L +S P LV+
Sbjct: 180 LTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEENLS--PHLVV 237
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E A + P + V+ Y G+ E R ++EH + S FDVL
Sbjct: 238 APLSTIRNWEREFATWAPHMNVVMYTGDSEA----RDVIWEH---EFYFSEGRKSKFDVL 290
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY++V LS I W IIDE RLKN S LY+ L + F +L+TGTP+QN
Sbjct: 291 LTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQKSKLYSSLSQ-FTSKHIVLLTGTPLQN 349
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL+EL+ALMHF FG+L +F K+ EQ + L +L+ +LRR
Sbjct: 350 NLNELFALMHFLDADKFGSLEKFQDINKE--------------EQISRLHQMLAPHLLRR 395
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRK-----------ELPKLLALSS 315
K+ +++ +PP E+ + QK+VY +++ ++ +L
Sbjct: 396 LKKDVLKDK---VPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAKISNVLMKLR 452
Query: 316 RTANHQSLQNT-----------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ +H L ASGKL +LD ++ KL GHRVL++ Q TL
Sbjct: 453 QVCSHPYLLPDFEPRFEDANEAFTKLLEASGKLQLLDKMMVKLKEQGHRVLIYTQFQHTL 512
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
+L+D+ + ++YER+DG I ER I F+ +++ + F F++STRA
Sbjct: 513 YLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENS-----------NRFCFLLSTRA 561
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL ADTVI Y+ DWNP D QA+ R HR+GQ N V+ L+ + TVEE +M
Sbjct: 562 GGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMMEIT 621
Query: 479 ERKLRLSHNVVG---------DDVVDREVKERTAVETDD 508
+ K+ L H VVG DD++ KE + E D+
Sbjct: 622 KNKMLLEHLVVGKQHLCQDELDDIIKYGSKELFSEENDE 660
>gi|324500954|gb|ADY40432.1| Chromatin-remodeling complex ATPase chain isw-1 [Ascaris suum]
Length = 1053
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 186/515 (36%), Positives = 276/515 (53%), Gaps = 73/515 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
E++ +Q+ GL+WLI G+N +L DEMGLGKTLQ I+ L ++K + + GP LV+
Sbjct: 151 NGEMRDYQIRGLNWLISLQHNGINGILADEMGLGKTLQTIAMLGFMKHYKNAAGPHLVIT 210
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S W++E K+ P L+ + +G E R + R + + P +DVL+
Sbjct: 211 PKSTLQNWLNEFEKWCPSLKAIALIGYAEARAELIRDV------------ILPGGWDVLV 258
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++VL ++ L + W + +IDEA R+KN +S L ++RE F RLL+TGTP+QNN
Sbjct: 259 TSYEMVLREKSLLRKYVWKFLVIDEAHRIKNENSKLSEIVRE-FKSKNRLLITGTPLQNN 317
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P +F + F S F ++ G + + L +L F+LRR
Sbjct: 318 LHELWALLNFLLPDMFALASDFDSWF------TTNEMMGN-QNLVSRLHQVLKPFLLRRL 370
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKELP--------------KLLAL 313
K + L P E+ + +Q++ Y IL K++ +L
Sbjct: 371 KSDV----ETTLLPKKEVKIYVGLSKMQREWYTKILLKDIDVVNGAGKLEKARIMNILMH 426
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A +GK+V+LD LLKKL G RVL+F+QM++ L
Sbjct: 427 LRKCCNHPYLFDGAEPGPPYTTDQHLVDNAGKMVLLDKLLKKLKEQGSRVLIFSQMSRML 486
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
D+L+D+ R Y Y RLDG +R +I F+ + + F+FM++TRA
Sbjct: 487 DLLEDYCWWRNYQYCRLDGQTAHADRQMSIDEFNRPDS-----------EKFIFMLTTRA 535
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AAD VI Y+ DWNPQVD QA+ RAHRIGQ V +TE TV+E I+ RA
Sbjct: 536 GGLGINLTAADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITESTVDERIIERA 595
Query: 479 ERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
E KL L V+ R + A+ DD+ +I
Sbjct: 596 EMKLHLDSIVIQQ---GRLADSQKALGKDDMLDMI 627
>gi|403223363|dbj|BAM41494.1| uncharacterized protein TOT_030000756 [Theileria orientalis strain
Shintoku]
Length = 1405
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 182/530 (34%), Positives = 272/530 (51%), Gaps = 109/530 (20%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+ +Q++GL+WL+ Y +N +L DEMGLGKT+Q I+ + YLK ++ GP +VL
Sbjct: 550 IAGKLRNYQLQGLTWLVSLYNNKLNGILADEMGLGKTIQTIALIIYLKENKGISGPHIVL 609
Query: 93 CPLS-VTDGWVSEMAKFTPKLEVLRYVGE------------------------------- 120
P+S + W +E + P + L +
Sbjct: 610 APMSTLHSNWKNEFETWFPTCKPLTHCYANGTNNTLPLVLVSYLQITMIVIQVSYRDSEN 669
Query: 121 ------REQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYT 174
RE R+++R+ YE K L FDVLLTT +L D+ FL ++ W Y
Sbjct: 670 SNKYECREWRKSLRQKWYEGNK----------LTFDVLLTTDSFILKDRVFLKKVCWEYL 719
Query: 175 IIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQ 234
I+DEA RLKNP+S L VL ++F+ RRLL+TGTP+QN+L+ELW+L++F P +F N
Sbjct: 720 IVDEAHRLKNPNSKLVKVLNQYFISNRRLLLTGTPLQNDLNELWSLLNFIKPQIFNDNNY 779
Query: 235 FLST-----------FKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHL 283
+ + D V + + E + +L ++LRR K +++E
Sbjct: 780 YYQLFSLSLSSLVRRYDDCVLFTEEEQL----EIINRIHKVLKPYLLRREKLEVLE---- 831
Query: 284 MLPPLTEITV------LQKKVYASILRKELPKLLALSSR-TANHQSL-QNTA-------- 327
+P E V +Q ++Y ++ K+ P+ L R NH L N A
Sbjct: 832 EVPRNDEFIVCCPMSGVQTRLYEFLVLKDTPQNRFLQLRKICNHPYLYANNAYPCKRDDI 891
Query: 328 ---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSY 372
SGKL +LDL+L +LY HRVL+F+QMT LDIL+ +L R Y +
Sbjct: 892 YSVDDCQRDDMLIASSGKLCMLDLILSRLYEVSHRVLIFSQMTSMLDILEIYLSYRNYKF 951
Query: 373 ERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVI 432
RLDGS +E+R + F+ ++ + FVF++ST+AG +G+NL ADTVI
Sbjct: 952 LRLDGSTTSEKRLERLNLFNKPNS-----------EYFVFILSTKAGSLGINLQTADTVI 1000
Query: 433 FYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKL 482
Y+ DWNPQ D QA R HRIGQ N V+S+ +T +T+EE I++ KL
Sbjct: 1001 IYDSDWNPQNDLQAQSRVHRIGQKNKVISLRFITPNTIEENILKSTGIKL 1050
>gi|403352061|gb|EJY75536.1| Helicase [Oxytricha trifallax]
Length = 1177
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/489 (36%), Positives = 265/489 (54%), Gaps = 73/489 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKF------SQMSPGPFL 90
L+ +QVEGL+WL + +N +L DEMGLGKT+Q+I+ ++ ++ + +
Sbjct: 133 LRDYQVEGLNWLYKLQQTKLNGILADEMGLGKTIQSIAIMALVESFKTQEQRESRKTHHI 192
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
V+ P V W E+ ++ P L + ++ G E+R ++ M +H FD
Sbjct: 193 VIVPKIVLGKWNKEIQEWVPSLRLKQFYGSNEEREIQKQEMRQH-------------QFD 239
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
++LTT++ V+ ++G LS+ + + I+DEAQR+KN SVL VLR+ F R+L+TGTP+
Sbjct: 240 IMLTTFETVIREKGELSKYHFEFLILDEAQRIKNDESVLSQVLRK-FKTQHRILLTGTPL 298
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QNNL ELWAL++F MP +F + +F F + + + +I Q L L FML
Sbjct: 299 QNNLKELWALLNFLMPKLFDSAEEFKELF--MIKNEYEGAQEQIIRQIHRL---LRPFML 353
Query: 271 RRTKQKLVECGHLMLPPLTEI------TVLQKKVYASIL------------RKELPKLLA 312
RR K + + LP EI + LQK++Y +IL + +L +L
Sbjct: 354 RRLKVDVEKN----LPTKKEIYLFIGLSKLQKQLYKNILTGNIDVVNGVGDKIKLLNVLM 409
Query: 313 LSSRTANHQSLQNTASG---------------KLVVLDLLLKKLYNSGHRVLLFAQMTQT 357
+ NH L + K VLDLL+ KL N G ++L+F+QMT+
Sbjct: 410 QLKKVCNHPYLFDKVEPGPPFLDGEHLIDNCMKFKVLDLLVPKLLNQGCKILIFSQMTRL 469
Query: 358 LDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTR 417
LDIL DFL R Y Y R+DG A +R I F + ++L F++STR
Sbjct: 470 LDILDDFLRFRGYQYCRIDGQTSANDREIRIEEFQKADSTKQL-----------FILSTR 518
Query: 418 AGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRR 477
AGG+G+NL +A+ VI ++ DWNPQVD QA+ RAHRIGQ V+ VTE +VEE I+ R
Sbjct: 519 AGGLGINLHSANVVIIFDSDWNPQVDLQAIDRAHRIGQKRDVVVYRFVTEGSVEEKIVER 578
Query: 478 AERKLRLSH 486
A RKLR+ H
Sbjct: 579 AARKLRVDH 587
>gi|281200598|gb|EFA74816.1| chromo domain-containing protein [Polysphondylium pallidum PN500]
Length = 2720
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/512 (35%), Positives = 280/512 (54%), Gaps = 90/512 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
+F + LK QVEG WL + + LL DEMGLGKT+Q I+FL Y+ + GPF
Sbjct: 814 KFNESLSLKQFQVEGFLWLSYCWYHERSSLLADEMGLGKTIQTIAFLQYISQTVGIKGPF 873
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPF 149
+V+ PLS W E+ K+T + VL + G +E R +++ ++ +++S M F
Sbjct: 874 MVVAPLSTLGNWHKEIIKWT-NMRVLVFYGTQEARSTLKKYEWKR-QDKSYM-------F 924
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRRLLM 205
+++LTTY+ V+ + + ++PW ++DE R+KN +S + L+ EH L++
Sbjct: 925 EIMLTTYETVMTEHSDIVKVPWRIMVLDEGHRIKNVNSKVLTKLKSIRSEH-----TLIL 979
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGIL 265
TGTP+QN++ ELW +++F F + +FL+ F D S Q L +L
Sbjct: 980 TGTPLQNDMKELWTMLNFLDSRKFNSCTEFLAEFSDLKEES----------QVQRLHHLL 1029
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITVLQ-------KKVYASILRKE------------ 306
S ++LRR K+ + L +P + E TV+Q K Y +IL K
Sbjct: 1030 SPYLLRRMKEDV----ELSIP-IKEETVIQVELSSTQKTYYRAILEKNREFLARGVKSKS 1084
Query: 307 -LPKLLALS---SRTANHQSL----QNT-------------------ASGKLVVLDLLLK 339
LPKL + + NH L ++T +S KLV++D LL+
Sbjct: 1085 NLPKLTNIMIQIRKVCNHPFLILGAEDTIIRQEKLKTEEQISELLIRSSSKLVLVDKLLQ 1144
Query: 340 KLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIER 399
+L GH+VL+F+QM ++L+IL+D+L R+Y YERLDGS+++E R Q++IER
Sbjct: 1145 RLKAEGHKVLIFSQMVESLNILEDYLHYREYLYERLDGSVKSEVR---------QASIER 1195
Query: 400 LYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHV 459
+ +D FVF++STR+GGVG+NL +ADTVI ++ DWNPQ D QA R HRIGQ ++V
Sbjct: 1196 FMDKE--SDRFVFLLSTRSGGVGINLTSADTVILFDSDWNPQSDLQAQARCHRIGQTSNV 1253
Query: 460 LSINLVTEHTVEEVIMRRAERKLRLSHNVVGD 491
L+T +T E+ + A +KL L H V+ +
Sbjct: 1254 KVYRLITRNTYEQYLFEVATKKLLLDHIVLNN 1285
>gi|330797032|ref|XP_003286567.1| hypothetical protein DICPUDRAFT_97424 [Dictyostelium purpureum]
gi|325083472|gb|EGC36924.1| hypothetical protein DICPUDRAFT_97424 [Dictyostelium purpureum]
Length = 1281
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 173/504 (34%), Positives = 273/504 (54%), Gaps = 67/504 (13%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
++ + +LK +QV GL WL+ Y +N +L DEMGLGKT+Q I+F+S+L
Sbjct: 465 IEQPDLMTGGKLKEYQVTGLEWLVSLYNRNLNGILADEMGLGKTVQTIAFISFLYERMNV 524
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
PFLV+ PLS W SE +++PKL V+ Y G++E+R+ + R + ++
Sbjct: 525 REPFLVVAPLSTISNWSSEFIRWSPKLHVIVYKGKQEERKEVFRQIPKN----------- 573
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F V++T+++ ++ D+ L ++ W Y IIDE R+KN +S L LR+ + RLL+
Sbjct: 574 --GFVVIITSFEYIIKDKNRLGKLDWVYIIIDEGHRIKNKNSKLSLQLRQ-YKSKHRLLL 630
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKR-GKIKEQ-----FT 259
TGTP+QN+LSELWAL++F +PS+F + + F F + S K + E+
Sbjct: 631 TGTPLQNDLSELWALLNFLLPSIFNSADTFEHWFNAPFQNQSKSKSLINVNEEEQLIIIN 690
Query: 260 SLKGILSAFMLRR-----------TKQKLVECGH-----LMLPPLTEITVL-----QKKV 298
L +L F+LRR K+K+++C M L E VL K+
Sbjct: 691 RLHQVLRFFLLRRLKSDVESQLPDKKEKVIKCNLSALQIAMYRSLVEYGVLPVDPDSKEG 750
Query: 299 YASILR-KELPKLLALSSRTANHQSLQNT----------ASGKLVVLDLLLKKLYNSGHR 347
A L+ K ++ + NH L +SGK +D +L K++ S HR
Sbjct: 751 RAGRLKMKGFNNIVKQLQKICNHPYLFKEEWDINEDLIRSSGKFDTMDQILTKMHASKHR 810
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F QMT+ +++++++ L++++Y RLDGS + EER L E
Sbjct: 811 VLIFTQMTEVINLMEEYFSLKEWTYLRLDGSTKPEER-------------AHLVVEWNRP 857
Query: 408 DA--FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLV 465
D+ ++F++ST AGG+G+NL ADTVI ++ DWNPQ+D QA R HRIGQ N V L+
Sbjct: 858 DSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNAVNVYRLI 917
Query: 466 TEHTVEEVIMRRAERKLRLSHNVV 489
+ +++EE I+ RA KL + ++
Sbjct: 918 SANSIEEKILERATDKLEIDAKII 941
>gi|397475646|ref|XP_003809243.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
3 [Pan paniscus]
Length = 796
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 217/623 (34%), Positives = 307/623 (49%), Gaps = 112/623 (17%)
Query: 106 AKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGF 165
A+F P L + Y G++E+R +++ + K++S+ F VLLTTY++ L D F
Sbjct: 15 ARFAPGLSCVTYAGDKEERACLQQDL----KQESR--------FHVLLTTYEICLKDASF 62
Query: 166 LSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCM 225
L PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L EL++L+ F
Sbjct: 63 LKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQELYSLLSFVE 121
Query: 226 PSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHL 283
P +F + F+ ++D S E + L +L F+LRR K ++
Sbjct: 122 PDLFSKEEVGDFIQRYQDIEKES---------ESASELHKLLQPFLLRRVKAEVA----T 168
Query: 284 MLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT----------- 326
LP TE+ + LQKK Y +IL K+L A + TA LQN
Sbjct: 169 ELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENETAKKVKLQNILSQLRKCVDHP 225
Query: 327 -------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLEL 367
ASGKL +LD LL LY+ GHRVLLF+QMTQ LDILQD+++
Sbjct: 226 YLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDY 285
Query: 368 RKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVA 427
R YSYER+DGS+R EER AI++F G F+F++STRAGGVG+NL A
Sbjct: 286 RGYSYERVDGSVRGEERHLAIKNF-------------GQQPIFIFLLSTRAGGVGMNLTA 332
Query: 428 ADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHN 487
ADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A KL+L++
Sbjct: 333 ADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNM 392
Query: 488 VVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNEESDDLRLSGLNSMVEKVI 545
++ ++ A L I+ FGL L + +E D + G + V
Sbjct: 393 IIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTIDEIDLESILGETKDGQWVS 452
Query: 546 AMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASE 605
G ++ N + L E D S S+ L ++ +EK +
Sbjct: 453 DALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQ-KTLLEKTSQEGR 511
Query: 606 SSSNT-------IAESGRRR----SP---EDKQRK-----------LEAARRKAEE---- 636
S N + E +R SP ED+Q+K +E +R+ EE
Sbjct: 512 SLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHK 571
Query: 637 KKLAKWEANGYQSLSVKTPVCSP 659
KK+A WE+N YQS + + P
Sbjct: 572 KKMAWWESNNYQSFCLPSEESEP 594
>gi|7243213|dbj|BAA92654.1| KIAA1416 protein [Homo sapiens]
Length = 1967
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 192/533 (36%), Positives = 275/533 (51%), Gaps = 83/533 (15%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL Y + + GPF
Sbjct: 199 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFL-YEIYLKGIHGPF 257
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSPLP 148
LV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 258 LVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGSYK 314
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F ++TT++++L D L IPW +IDEA RLKN + L L+ + ++L+TGT
Sbjct: 315 FHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLK-MMDLEHKVLLTGT 373
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QN + EL++L+HF PS F + F+ F D K +EQ L+ IL
Sbjct: 374 PLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQAILKPM 423
Query: 269 MLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE------------LPKL 310
MLRR K+ + + L P E+T +QKK Y +IL K +P L
Sbjct: 424 MLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNL 479
Query: 311 LALS---SRTANHQSLQN---------------------------TASGKLVVLDLLLKK 340
L + NH L N A+GKLV++D LL K
Sbjct: 480 LNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPK 539
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
L GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS +
Sbjct: 540 LKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDS---- 595
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIGQ V
Sbjct: 596 -------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVK 648
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 649 IYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 701
>gi|167517999|ref|XP_001743340.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778439|gb|EDQ92054.1| predicted protein [Monosiga brevicollis MX1]
Length = 927
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 195/542 (35%), Positives = 285/542 (52%), Gaps = 76/542 (14%)
Query: 28 AAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPG 87
+ ++ +Q+ GL+WL+ + + +L DEMGLGKTLQ IS L YLK + G
Sbjct: 62 GCHYITGGTMRDYQLRGLNWLVNLHTHAMGGILADEMGLGKTLQTISLLGYLKNFEGMNG 121
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL 147
PFL+L P S W+ E+ ++ P L+ + G+++ R Q + P
Sbjct: 122 PFLLLVPKSTVGNWMRELGRWCPSLKAVCLRGDKDAR------------AQLIQDTILPA 169
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
+D L+T+Y++ L ++ L + W Y +IDEA R+KN +S L VLRE RRLL+TG
Sbjct: 170 KWDCLVTSYEMCLREKSTLRKFIWQYIVIDEAHRIKNENSKLSLVLRE-IRSRRRLLITG 228
Query: 208 TPIQNNLSELWALMHFCMPSVFGTLNQFLSTFK-DAVHSSSAPKRGKIKEQFTSLKGILS 266
TP+QNNL ELWAL++F +P VF + F S FK + +H + + L IL
Sbjct: 229 TPLQNNLHELWALLNFLLPDVFSSSEDFDSYFKTEDIHQQN--------DMIHKLHAILK 280
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K+++ + L P E V +Q+ Y IL K+
Sbjct: 281 PFLLRRLKKEVEKS----LKPKIETKVYVGLSRMQRDWYKKILAKDIEAVNGAGKMEKMR 336
Query: 307 LPKLLALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + A GK++VLD LLKKL G RVL+F
Sbjct: 337 LLNILMQLRKCCNHPYLFDGAEPGPPFTTDQHLIDNCGKMLVLDKLLKKLQEQGSRVLIF 396
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y+Y R+DGS + R I ++ +++ + F+
Sbjct: 397 SQMTRMLDILEDYCWWRNYNYCRIDGSTSHDVRNEMIDEYNKENS-----------EKFI 445
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI ++ DWNPQ+D QA RAHRIGQ V L+TE TVE
Sbjct: 446 FMLSTRAGGLGINLATADVVILFDSDWNPQMDLQAQDRAHRIGQKKQVRIFRLITEGTVE 505
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLFDPKAINNEESD 530
E I+ +AE KLRL V+ R +++ + D++ S+I FG NN +
Sbjct: 506 ERIVEKAEMKLRLDAMVIQQ---GRLAQQQKQLGKDEMLSMIQFGADQMFKSTENNITDE 562
Query: 531 DL 532
D+
Sbjct: 563 DI 564
>gi|351713650|gb|EHB16569.1| Chromodomain-helicase-DNA-binding protein 7 [Heterocephalus glaber]
Length = 2988
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 959 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1015
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1016 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVMKGS 1072
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1073 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1127
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1128 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1177
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1178 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1233
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1234 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1293
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1294 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1353
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1354 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1402
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1403 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1461
>gi|291409634|ref|XP_002721122.1| PREDICTED: chromodomain helicase DNA binding protein 6 [Oryctolagus
cuniculus]
Length = 2717
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 198/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 425 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 484
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 485 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 542
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 543 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 600
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 601 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 659
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 660 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 705
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 706 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 765
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 766 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 825
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 826 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 874
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 875 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 932
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + VE +DL
Sbjct: 933 INRKGSTNGVQQLSKVEVEDL 953
>gi|296226564|ref|XP_002758985.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
[Callithrix jacchus]
Length = 2994
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|395729961|ref|XP_002810380.2| PREDICTED: chromodomain helicase DNA binding protein 1-like isoform
2 [Pongo abelii]
Length = 798
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 221/633 (34%), Positives = 307/633 (48%), Gaps = 132/633 (20%)
Query: 106 AKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGF 165
A+F P L + Y G++E+R +++ + K++S+ F VLLTTY++ L D F
Sbjct: 15 ARFAPGLSCVTYAGDKEERACLQQDL----KQESR--------FHVLLTTYEICLKDASF 62
Query: 166 LSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCM 225
L PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L EL++L+ F
Sbjct: 63 LKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQELYSLLSFVE 121
Query: 226 PSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHL 283
P +F + F+ ++D S E + L +L F+LRR K ++
Sbjct: 122 PDLFSKEEVGDFIQRYQDIEKES---------ESASELHKLLQPFLLRRVKAEVA----T 168
Query: 284 MLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT----------- 326
LP TE+ + LQKK Y +IL K+L A + A LQN
Sbjct: 169 ELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENEMAKKVKLQNILSQLRKCVDHP 225
Query: 327 -------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLEL 367
ASGKL +LD LL LY+ GHRVLLF+QMTQ LDILQD+++
Sbjct: 226 YLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDY 285
Query: 368 RKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVA 427
R YSYER+DGS+R EER AI++F G FVF++STRAGGVG+NL A
Sbjct: 286 RGYSYERVDGSVRGEERHLAIKNF-------------GQQPIFVFLLSTRAGGVGMNLTA 332
Query: 428 ADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHN 487
ADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A KL+L++
Sbjct: 333 ADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNM 392
Query: 488 VVGDDVVDREVKERTAVETDDLRSII-FGLHLF-----------DPKAINNEESDDLRLS 535
++ ++ A L I+ FGL D ++I E D +S
Sbjct: 393 IIEGGHFTLGAQKPAADADFQLSEILKFGLDKLLASEGSTMDEIDLESILGETKDGQWVS 452
Query: 536 GLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRS 595
E EQ GK N + L E D S S+ L ++
Sbjct: 453 DALPAAE---GGSREQEEGK-------NHMYLFEGKDYSKEPSKEDRKSFEQLVNLQ-KT 501
Query: 596 WVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK-----------LEAA 630
+EK + S N + E +R SP ED+Q+K +E
Sbjct: 502 LLEKTSQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEK 561
Query: 631 RRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+R+ EE KK+A WE+N YQS + + P
Sbjct: 562 KRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 594
>gi|119607237|gb|EAW86831.1| chromodomain helicase DNA binding protein 7, isoform CRA_b [Homo
sapiens]
Length = 2996
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|154344042|ref|XP_001567965.1| putative DNA-dependent ATPase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065299|emb|CAM40727.1| putative DNA-dependent ATPase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1103
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 173/494 (35%), Positives = 263/494 (53%), Gaps = 69/494 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +L+P+Q+EG++WL+ + GVN +L DEMGLGKT Q I+ ++YLKF+ PGP LV+
Sbjct: 162 IRGKLRPYQIEGVNWLLGLFSRGVNGILADEMGLGKTFQTIATIAYLKFTVGMPGPHLVV 221
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
CP SV W E + P L V ++ + R +I + + + + +DV+
Sbjct: 222 CPKSVMGNWYREFKHWCPGLSVYKFHVSSDLRPSIIK---------AHLHPTDRIKYDVI 272
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+TT+++VL + +I W Y I+DEA +LKN + L + RL++TGTP+QN
Sbjct: 273 VTTFEMVLDELNLFKRIAWQYLIVDEAHKLKNEEGRAHTAL-DSLQTSHRLIITGTPLQN 331
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL+HF P +F F + F ++S + + ++L IL+ M+RR
Sbjct: 332 NLKELWALLHFLAPRLFNDSESFDAWFD----TTSGQQDTNV---MSNLHKILAPLMIRR 384
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------LPKLLAL 313
K V G +P EI V Q++ Y ++L K+ L ++
Sbjct: 385 LKAD-VSTG---IPAKKEIYVSCQLSKKQREWYMNVLAKDAEVLNKAGGSVASLTNVMMG 440
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKL---YNSGHRVLLFAQMT 355
+ NH L SGK+++LD LL +L H+VL+F+Q T
Sbjct: 441 LRKVINHPYLMEGGEEGPPFVTDEKLVRTSGKMIILDKLLHRLRADVQGKHKVLIFSQFT 500
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
L+IL+D+ +R + Y R+DG+ ER + + F+ ++ D F+F++S
Sbjct: 501 SMLNILEDYCNMRGFMYCRIDGNTSGYERDSQMASFNSPTS-----------DYFIFLLS 549
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL AA+ VI Y+ DWNPQ+D QA RAHRIGQ V VT+ T+EE +
Sbjct: 550 TRAGGLGINLQAANHVILYDSDWNPQMDLQAQDRAHRIGQKRSVRVYRFVTDGTLEEKMY 609
Query: 476 RRAERKLRLSHNVV 489
RRA +KL L VV
Sbjct: 610 RRALKKLYLDAVVV 623
>gi|403288790|ref|XP_003935570.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Saimiri
boliviensis boliviensis]
Length = 2996
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|332826148|ref|XP_519780.3| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pan
troglodytes]
Length = 2997
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|397475364|ref|XP_003809109.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pan paniscus]
Length = 2997
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|380814506|gb|AFE79127.1| chromodomain-helicase-DNA-binding protein 7 [Macaca mulatta]
Length = 2998
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|355779714|gb|EHH64190.1| Chromodomain-helicase-DNA-binding protein 7 [Macaca fascicularis]
Length = 2998
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|148673732|gb|EDL05679.1| mCG20155 [Mus musculus]
Length = 2985
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 951 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1007
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1008 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1064
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1065 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1119
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1120 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1169
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1170 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1225
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1226 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1285
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1286 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1345
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1346 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1394
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1395 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1453
>gi|54112403|ref|NP_060250.2| chromodomain-helicase-DNA-binding protein 7 [Homo sapiens]
gi|148877246|sp|Q9P2D1.3|CHD7_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 7;
Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7
gi|119607240|gb|EAW86834.1| chromodomain helicase DNA binding protein 7, isoform CRA_d [Homo
sapiens]
gi|225000838|gb|AAI72443.1| Chromodomain helicase DNA binding protein 7 [synthetic construct]
Length = 2997
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|124487249|ref|NP_001074886.1| chromodomain-helicase-DNA-binding protein 7 [Mus musculus]
gi|148877247|sp|A2AJK6.1|CHD7_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 7;
Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7
Length = 2986
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 951 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1007
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1008 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1064
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1065 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1119
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1120 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1169
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1170 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1225
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1226 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1285
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1286 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1345
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1346 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1394
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1395 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1453
>gi|355697982|gb|EHH28530.1| Chromodomain-helicase-DNA-binding protein 7 [Macaca mulatta]
Length = 2998
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|297682946|ref|XP_002819164.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pongo abelii]
Length = 2997
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|426359734|ref|XP_004047120.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 1
[Gorilla gorilla gorilla]
Length = 2997
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|291388024|ref|XP_002710542.1| PREDICTED: chromodomain helicase DNA binding protein 7 [Oryctolagus
cuniculus]
Length = 2997
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|390462609|ref|XP_002806815.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6 [Callithrix jacchus]
Length = 2714
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGIFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGGTNGVQQLSKMEVEDL 955
>gi|426359736|ref|XP_004047121.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
[Gorilla gorilla gorilla]
Length = 2989
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|402878334|ref|XP_003902847.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Papio anubis]
Length = 2977
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|351704214|gb|EHB07133.1| Chromodomain-helicase-DNA-binding protein 6 [Heterocephalus glaber]
Length = 2756
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 196/561 (34%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQ+ +I H D D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 483 ESLQILPEIKHVDRPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 542
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 543 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 600
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 601 SRQMIQQ--YEMVYRDTQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 658
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F P+ F + FL F D
Sbjct: 659 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPTQFPSETAFLEEFGD 717
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 718 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 763
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 764 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 823
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 824 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 883
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 884 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 932
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 933 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 990
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 991 INRKGGTNGVQQLSKMEVEDL 1011
>gi|302816250|ref|XP_002989804.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii]
gi|300142370|gb|EFJ09071.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii]
Length = 2150
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 188/534 (35%), Positives = 278/534 (52%), Gaps = 75/534 (14%)
Query: 20 RDGQTPVDA-----AEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAIS 74
+DGQ ++A AE +L PHQ+E L+WL + + NV+L DEMGLGKT+ A +
Sbjct: 673 KDGQGELEAVKEQPAEL-QGGQLFPHQMEALNWLRKCWHKKKNVILADEMGLGKTISACA 731
Query: 75 FLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEH 134
FLS L + GP LVL PLS W++E A + P L V+ Y G + R IR+ YE
Sbjct: 732 FLSSLHYEFKVRGPCLVLVPLSTMPNWMAEFALWAPGLNVIEYHGSVKARAVIRQ--YEW 789
Query: 135 VKEQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR 194
F V+LT Y+ V+ D L +PW ++DE RLKN S L+ +L
Sbjct: 790 YASSHGSKKQRAYKFKVMLTNYETVINDPTPLRSLPWEALVVDEGHRLKNSGSKLFTLLN 849
Query: 195 EHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKI 254
F R+LMTGTP+QNNL E++ L++F +P F +L F F A+ ++
Sbjct: 850 T-FSFAHRVLMTGTPMQNNLGEMYNLLNFLLPEKFPSLAAFQEKFS-ALSTA-------- 899
Query: 255 KEQFTSLKGILSAFMLRRTKQKLVECGHLMLPP------LTEITVLQKKVYASILRKELP 308
EQ ++ +++ MLRR K+ ++ +PP L E++ +Q + Y ++L K
Sbjct: 900 -EQVEEIRKLVTPHMLRRLKKDAMQ----GIPPKAERVVLVELSAVQAEYYRALLTKNY- 953
Query: 309 KLLALSSRT--------------ANH-----------------QSLQNTASGKLVVLDLL 337
+LL +++ NH ++ AS KL +L +
Sbjct: 954 QLLRQGTKSQQSMINIIMQLRKVCNHPYLIPGTEPESGTGEFLHEMRIKASAKLTLLHSM 1013
Query: 338 LKKLYNSGHRVLLFAQMTQTLDILQDFL--ELRKYSYERLDGSIRAEERFAAIRHFSVQS 395
L L GHRVL+F+QMT+ LDIL+D+L E SYER+DGS+ ER AAIR ++ +
Sbjct: 1014 LGSLKKEGHRVLIFSQMTKLLDILEDYLTFEFGHDSYERVDGSVPVAERQAAIRRYNKDT 1073
Query: 396 AIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQ 455
+ FVF++STR+ G+G+NL ADTVI Y+ D+NP D QA+ RAHRIGQ
Sbjct: 1074 S------------RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQ 1121
Query: 456 MNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDL 509
+L L+ +VEE I+ A++KL L +E+++ +DL
Sbjct: 1122 SKKLLVYRLLVRGSVEERILHLAKKKLELEQLFASKSGSQKEIEDILQWGAEDL 1175
>gi|328863716|gb|EGG12815.1| hypothetical protein MELLADRAFT_46455 [Melampsora larici-populina
98AG31]
Length = 1261
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 173/503 (34%), Positives = 261/503 (51%), Gaps = 74/503 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
LK +QV+GL W++ Y +N +L DEM KT+Q IS +++L + PGP+LV+ PLS
Sbjct: 353 LKDYQVKGLQWMVSLYNNRLNGILADEMAR-KTIQTISLITWLIEHKKQPGPYLVIVPLS 411
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E K+ P+++V+ Y G +V++Q Q + F VLLTTY
Sbjct: 412 TMPNWTLEFEKWAPRIKVVLYKGS------------PNVRKQIQTQQLRSGQFQVLLTTY 459
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+ ++ D+ LS+I W + IIDE R+KN S L L H+ RL++TGTP+QNNL E
Sbjct: 460 EYIIKDRPVLSKIKWIHMIIDEGHRMKNTQSKLSLTLTTHYSSRYRLILTGTPLQNNLPE 519
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSAFMLR 271
LWAL++F +P VF ++ F F ++ + ++ E+ L +L F+LR
Sbjct: 520 LWALLNFVLPKVFNSVKSFDEWFNTPFANTGGQDKIELNEEEAILVIRRLHKVLRPFLLR 579
Query: 272 RTK-----------QKLVECGHLMLP-PLTEITVLQKKVYASI---------------LR 304
R K +++++C L LT + + K ++ + +
Sbjct: 580 RLKKDVESELPDKVERVIKCKMSGLQLKLTNMLKIHKVIWTDVDSYANNLKGNNGTGGIM 639
Query: 305 KELPKLLALSSRTANH----QSLQNT--------------ASGKLVVLDLLLKKLYNSGH 346
K L ++ + NH + ++ T A+GK +LD +L KL+ +GH
Sbjct: 640 KGLQNVIMQFKKICNHPFTFEEVERTINGPDKPTNDTLWRAAGKFELLDRVLPKLFATGH 699
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F QMTQ +DI QD+ R RLDG + EER ++ F+
Sbjct: 700 RVLMFFQMTQVMDIFQDYCAYRGIKNLRLDGMTKPEERADLLKTFNHPQC---------- 749
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
D +F++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ V + L+T
Sbjct: 750 -DIHLFILSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKKEVRVLRLIT 808
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
+VEE IM +A+ KL + V+
Sbjct: 809 SKSVEEHIMSKAQFKLDMDKKVI 831
>gi|119607236|gb|EAW86830.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo
sapiens]
gi|119607239|gb|EAW86833.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo
sapiens]
Length = 3011
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 976 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1032
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1033 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1089
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1090 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1144
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1145 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1194
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1195 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1250
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1251 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1310
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1311 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1370
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1371 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1419
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1420 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1478
>gi|395859802|ref|XP_003802219.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Otolemur
garnettii]
Length = 3071
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 1034 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1090
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1091 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1147
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1148 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1202
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1203 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1252
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1253 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1308
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1309 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1368
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1369 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1428
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1429 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1477
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1478 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1536
>gi|395752329|ref|XP_002830358.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Pongo
abelii]
Length = 2424
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGGTNGVQQLSKMEVEDL 955
>gi|355563129|gb|EHH19691.1| Chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
Length = 2639
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 365 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 424
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 425 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 482
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 483 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 540
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 541 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 599
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 600 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 645
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 646 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 705
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 706 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 765
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 766 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 814
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 815 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 872
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 873 INRKGGTNGVQQLSKMEVEDL 893
>gi|348557269|ref|XP_003464442.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Cavia
porcellus]
Length = 2996
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYRNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|332858468|ref|XP_001148310.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6 isoform 6
[Pan troglodytes]
gi|410208168|gb|JAA01303.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
gi|410252212|gb|JAA14073.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
gi|410297958|gb|JAA27579.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
gi|410350331|gb|JAA41769.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
Length = 2715
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGGTNGVQQLSKMEVEDL 955
>gi|218191385|gb|EEC73812.1| hypothetical protein OsI_08529 [Oryza sativa Indica Group]
Length = 1765
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 251/466 (53%), Gaps = 40/466 (8%)
Query: 31 FGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFL 90
F + L+ +Q GL WL+ Y +N +L DEMGLGKT+ IS L++L + GP L
Sbjct: 516 FLLKHSLREYQHIGLDWLVAMYEKRLNGILADEMGLGKTIMTISLLAHLACEKGIWGPHL 575
Query: 91 VLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFD 150
++ P SV W +E K+ P ++L Y G ++R+ R+ + P F
Sbjct: 576 IVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKQKRQGW------------MKPNYFH 623
Query: 151 VLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPI 210
V +TTY +V+ D + W Y I+DEA +KN S + L +F RR+L+TGTP+
Sbjct: 624 VCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLL-NFNSKRRILLTGTPL 682
Query: 211 QNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
QN+L ELW+LMHF MP VF + +F F + + + KE L +L F+L
Sbjct: 683 QNDLMELWSLMHFLMPHVFQSHQEFKDWFCNPISGMVEGQDKVNKEVIDRLHNVLRPFIL 742
Query: 271 RRTKQKLVECGHLMLPPLTEITVL------QKKVYAS-ILRKELPKLLALSSRTANHQSL 323
RR K+ + + LP E + Q+ +Y I E LA + N+ +
Sbjct: 743 RRLKRDVEK----QLPQKHEHVIYCRLSRRQRNLYEDFIASSETQATLA----SGNYFGM 794
Query: 324 QNTASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEE 383
+ L +LL++L + GHR L+F QMT+ LDIL++F+ L Y+Y RLDGS + EE
Sbjct: 795 ISIIMQLRKELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEE 854
Query: 384 RFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVD 443
R ++ F+ F+F++STR+GGVG+NLV ADTVIFY+ DWNP +D
Sbjct: 855 RQTLMQRFNTNPKF------------FLFILSTRSGGVGINLVGADTVIFYDSDWNPAMD 902
Query: 444 KQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV 489
+QA R HRIGQ V L++E T+EE I+++A +K L V+
Sbjct: 903 QQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVI 948
>gi|19421557|gb|AAK56405.1| chromodomain helicase DNA binding protein 5 [Homo sapiens]
Length = 2713
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 425 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 484
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 485 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 542
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 543 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 600
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 601 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 659
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 660 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 705
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 706 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 765
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 766 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 825
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 826 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 874
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 875 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 932
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 933 INRKGGTNGVQQLSKMEVEDL 953
>gi|119596384|gb|EAW75978.1| chromodomain helicase DNA binding protein 6, isoform CRA_e [Homo
sapiens]
Length = 2731
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 462 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 521
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 522 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 579
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 580 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 637
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 638 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 696
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 697 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 742
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 743 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 802
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 803 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 862
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 863 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 911
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 912 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 969
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 970 INRKGGTNGVQQLSKMEVEDL 990
>gi|297299473|ref|XP_002805403.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like, partial
[Macaca mulatta]
Length = 2990
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 990 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1046
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1047 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1103
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1104 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1158
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1159 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1208
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1209 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1264
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1265 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1324
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1325 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1384
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1385 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1433
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1434 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1492
>gi|397511162|ref|XP_003825948.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Pan
paniscus]
Length = 2715
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGGTNGVQQLSKMEVEDL 955
>gi|441647726|ref|XP_004090826.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
[Nomascus leucogenys]
Length = 2989
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYRNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETVIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|426391703|ref|XP_004062207.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Gorilla
gorilla gorilla]
Length = 2715
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGGTNGVQQLSKMEVEDL 955
>gi|302816879|ref|XP_002990117.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii]
gi|300142130|gb|EFJ08834.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii]
Length = 700
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 180/513 (35%), Positives = 267/513 (52%), Gaps = 67/513 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L PHQ+E L+WL + + NV+L DEMGLGKT+ A +FLS L + GP LVL P
Sbjct: 6 GQLFPHQMEALNWLRKCWHKKKNVILADEMGLGKTISACAFLSSLHYEFKVRGPCLVLVP 65
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W++E A + P L V+ Y G + R IR+ YE F V+LT
Sbjct: 66 LSTMPNWMAEFALWAPGLNVIEYHGSVKARAVIRQ--YEWYASSHGSKKQRAYKFKVMLT 123
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
Y+ V+ D L +PW ++DE RLKN S L+ +L F R+LMTGTP+QNNL
Sbjct: 124 NYETVINDPTPLRSLPWEALVVDEGHRLKNSGSKLFTLLNT-FSFAHRVLMTGTPMQNNL 182
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
E++ L++F +P F +L F F A+ ++ EQ ++ +++ MLRR K
Sbjct: 183 GEMYNLLNFLLPEKFPSLAAFQEKF-SALSTA---------EQVEEIRKLVTPHMLRRLK 232
Query: 275 QKLVECGHLMLPP------LTEITVLQKKVYASILRKE-------------LPKLLALSS 315
+ ++ +PP L E++ +Q + Y ++L K + ++
Sbjct: 233 KDAMQG----IPPKAERVVLVELSAVQAEYYRALLTKNYQLLRQGTKSQQSMINIIMQLR 288
Query: 316 RTANH-----------------QSLQNTASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH ++ AS KL +L +L L GHRVL+F+QMT+ L
Sbjct: 289 KVCNHPYLIPGTEPESGTGEFLHEMRIKASAKLTLLHSMLGSLKKEGHRVLIFSQMTKLL 348
Query: 359 DILQDFL--ELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
DIL+D+L E SYER+DGS+ ER AAIR ++ ++ FVF++ST
Sbjct: 349 DILEDYLTFEFGHDSYERVDGSVPVAERQAAIRRYNKDTS------------RFVFLLST 396
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
R+ G+G+NL ADTVI Y+ D+NP D QA+ RAHRIGQ +L L+ +VEE I+
Sbjct: 397 RSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKKLLVYRLLVRGSVEERILH 456
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDL 509
A++KL L +E+++ +DL
Sbjct: 457 LAKKKLELEQLFASKSGSQKEIEDILQWGAEDL 489
>gi|410033370|ref|XP_003949534.1| PREDICTED: chromodomain helicase DNA binding protein 1-like [Pan
troglodytes]
Length = 783
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 217/624 (34%), Positives = 307/624 (49%), Gaps = 112/624 (17%)
Query: 105 MAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQG 164
M +F P L + Y G++E+R +++ + K++S+ F VLLTTY++ L D
Sbjct: 1 MQRFAPGLSCVTYAGDKEERACLQQDL----KQESR--------FHVLLTTYEICLKDAS 48
Query: 165 FLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFC 224
FL PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L EL++L+ F
Sbjct: 49 FLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQELYSLLSFV 107
Query: 225 MPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGH 282
P +F + F+ ++D K E + L +L F+LRR K ++
Sbjct: 108 EPDLFSKEEVGDFIQRYQDIE---------KEPESASELHKLLQPFLLRRVKAEVA---- 154
Query: 283 LMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT---------- 326
LP TE+ + LQK+ Y +IL K+L A + TA LQN
Sbjct: 155 TELPKKTEVVIYHGMSALQKRYYKAILMKDLD---AFENETAKKVKLQNILSQLRKCVDH 211
Query: 327 --------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLE 366
ASGKL +LD LL LY+ GHRVLLF+QMTQ LDILQD+++
Sbjct: 212 PYLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMD 271
Query: 367 LRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLV 426
R YSYER+DGS+R EER AI++F G FVF++STRAGGVG+NL
Sbjct: 272 YRGYSYERVDGSVRGEERHLAIKNF-------------GRQPIFVFLLSTRAGGVGMNLT 318
Query: 427 AADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSH 486
AADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A KL+L++
Sbjct: 319 AADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTN 378
Query: 487 NVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNEESDDLRLSGLNSMVEKV 544
++ ++ A L I+ FGL L + +E D + G + V
Sbjct: 379 MIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETKDGQWV 438
Query: 545 IAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEAS 604
G ++ N + L E D S S+ L ++ +EK +
Sbjct: 439 SDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQ-KTLLEKTSQEG 497
Query: 605 ESSSNT-------IAESGRRR----SP---EDKQRK-----------LEAARRKAEE--- 636
S N + E +R SP ED+Q+K +E +R+ EE
Sbjct: 498 RSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEH 557
Query: 637 -KKLAKWEANGYQSLSVKTPVCSP 659
KK+A WE+N YQS + + P
Sbjct: 558 KKKMAWWESNNYQSFCLPSEESEP 581
>gi|332213902|ref|XP_003256069.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 1
[Nomascus leucogenys]
Length = 2997
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYRNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETVIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>gi|164660548|ref|XP_001731397.1| hypothetical protein MGL_1580 [Malassezia globosa CBS 7966]
gi|159105297|gb|EDP44183.1| hypothetical protein MGL_1580 [Malassezia globosa CBS 7966]
Length = 999
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 175/495 (35%), Positives = 259/495 (52%), Gaps = 74/495 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G LK Q+ GL+WL + N +L DEMGLGKT+Q ++F SYL + GPFLV
Sbjct: 314 GEHGTLKDFQMTGLNWLAYLWSHAENGILADEMGLGKTVQTVAFFSYLFHTCYQYGPFLV 373
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W+S+ ++ P + V+ Y G + R IR + + + +V
Sbjct: 374 VVPLSTLPSWLSQFEQWAPDMNVVAYTGNSQSREVIR---------EYEFGPPRKMRLNV 424
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
LLTTY+ +L D+ L I W + +DEA RLKN S+LY L F +LL+TGTP+Q
Sbjct: 425 LLTTYEFILKDRAELMPIKWQFLAVDEAHRLKNAESLLYECLSS-FHCAGKLLITGTPLQ 483
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLR 271
NN+ EL AL+HF P F F S + KI+E L+ + MLR
Sbjct: 484 NNVRELSALLHFLRPDQFDFEVDF---------DISNVDQNKIQELHERLENV----MLR 530
Query: 272 RTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS---------- 315
R K+ + + LP + E++ +Q+++Y +IL + L S
Sbjct: 531 RLKRDVAK----ELPTKSEQILRVEMSAMQQRMYKAILTRNYSLLSGSHSTQFSLLNIAV 586
Query: 316 ---RTANHQSLQNTA-----------------SGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
+ +NH L + SGK+V+LD LL +L HRVL+F+QM
Sbjct: 587 ELKKASNHPYLFDGVETPTNSREETLRGLIMHSGKMVLLDKLLARLKADNHRVLIFSQMV 646
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
LDIL D+L LR Y ++RLDG++ ++ R AI HF+ + + F F++S
Sbjct: 647 HMLDILSDYLSLRGYVHQRLDGTVSSDTRKRAIDHFNAPQSPD-----------FCFLLS 695
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHR+ H+ +T+ TVEE ++
Sbjct: 696 TRAGGLGINLETADTVIIFDSDWNPQNDLQAMSRAHRLNSKFHINVFRFLTKGTVEEDVL 755
Query: 476 RRAERKLRLSHNVVG 490
RA++K+ L + ++
Sbjct: 756 ERAKQKMGLEYAIIN 770
>gi|432102738|gb|ELK30217.1| Chromodomain-helicase-DNA-binding protein 6 [Myotis davidii]
Length = 2697
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 405 ESLQVLPEIKHMERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 464
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 465 EMGLGKTIQSITFLSEI-FLRGVHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 522
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 523 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 580
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 581 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 639
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 640 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 685
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 686 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 745
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 746 SDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 805
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 806 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 854
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 855 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 912
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 913 INRKGSTNGVQQLSKMEVEDL 933
>gi|403290683|ref|XP_003936439.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Saimiri
boliviensis boliviensis]
Length = 2716
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGGTNGVQQLSKMEVEDL 955
>gi|29244924|ref|NP_115597.3| chromodomain-helicase-DNA-binding protein 6 [Homo sapiens]
gi|296439466|sp|Q8TD26.4|CHD6_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 6;
Short=CHD-6; AltName: Full=ATP-dependent helicase CHD6;
AltName: Full=Radiation-induced gene B protein
gi|119596381|gb|EAW75975.1| chromodomain helicase DNA binding protein 6, isoform CRA_b [Homo
sapiens]
gi|225000154|gb|AAI72397.1| Chromodomain helicase DNA binding protein 6 [synthetic construct]
Length = 2715
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGGTNGVQQLSKMEVEDL 955
>gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported] - Arabidopsis thaliana
Length = 1359
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 190/575 (33%), Positives = 285/575 (49%), Gaps = 103/575 (17%)
Query: 6 RLQVAAKIIHDNDERDGQTPVDAAEF----------GVTAELKPHQVEGLSWLIRRYLLG 55
R + + + H + RD Q EF + L P+Q+EGL++L +
Sbjct: 232 RTRRSKDVDHKRNPRDFQQFDHTPEFLKDVMIYLFPAIEGLLHPYQLEGLNFLRFSWSKQ 291
Query: 56 VNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVL 115
+V+L DEMGLGKT+Q+I+ L+ L + P LV+ PLS W E A + P++ V+
Sbjct: 292 THVILADEMGLGKTIQSIALLASLFEENLIP--HLVIAPLSTLRNWEREFATWAPQMNVV 349
Query: 116 RYVGEREQRRNIRRTMY--------EHVKEQSQMSNVSP---LPFDVLLTTYDVVLMDQG 164
Y G + R IR + K+ Q+S+ S + FDVLLT+Y+++ +D
Sbjct: 350 MYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSA 409
Query: 165 FLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFC 224
L I W I+DE RLKN S L++ L + + R+L+TGTP+QNNL EL+ LMHF
Sbjct: 410 VLKPIKWECMIVDEGHRLKNKDSKLFSSLTQ-YSSNHRILLTGTPLQNNLDELFMLMHFL 468
Query: 225 MPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLM 284
FG+L +F FKD +EQ + L +L+ +LRR K+ +++
Sbjct: 469 DAGKFGSLEEFQEEFKDINQ----------EEQISRLHKMLAPHLLRRVKKDVMK----D 514
Query: 285 LPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT------------ 326
+PP E+ + LQK+ Y +I + L+ + SL N
Sbjct: 515 MPPKKELILRVDLSSLQKEYYKAIFTRNYQ---VLTKKGGAQISLNNIMMELRKVCCHPY 571
Query: 327 ---------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFL 365
+ GKL +LD ++ KL GHRVL++ Q LD+L+D+
Sbjct: 572 MLEGVEPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYC 631
Query: 366 ELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNL 425
+K+ YER+DG + ER I F+ A ++ F F++STRAGG+G+NL
Sbjct: 632 THKKWQYERIDGKVGGAERQIRIDRFN-----------AKNSNKFCFLLSTRAGGLGINL 680
Query: 426 VAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLS 485
ADTVI Y+ DWNP D QA+ RAHR+GQ N V+ L+ T+EE +M+ ++K+ L
Sbjct: 681 ATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLE 740
Query: 486 HNVVG------------DDVVDREVKERTAVETDD 508
H VVG DD++ KE A E D+
Sbjct: 741 HLVVGKLKTQNINQEELDDIIRYGSKELFASEDDE 775
>gi|344237002|gb|EGV93105.1| Chromodomain-helicase-DNA-binding protein 6 [Cricetulus griseus]
Length = 2031
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 189/534 (35%), Positives = 284/534 (53%), Gaps = 86/534 (16%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ + L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FLS + F + GPF
Sbjct: 451 EYKNSNRLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEI-FVRGIHGPF 509
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL-P 148
L++ PLS W E +T ++ + Y G + R+ I++ YE V +Q + +S +
Sbjct: 510 LIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQ--YEMVYRDAQGNPLSGVFK 566
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F V++TT++++L D L +I W IIDEA RLKN + L L+ + ++L+TGT
Sbjct: 567 FHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLK-LMALEHKVLLTGT 625
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QN++ EL++L++F PS F + FL F D K +EQ L+ IL
Sbjct: 626 PLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL----------KTEEQVKKLQSILKPM 675
Query: 269 MLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE------------LPKL 310
MLRR K + + L P E+T +QKK Y +IL K +P L
Sbjct: 676 MLRRLKDDVEK----NLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNL 731
Query: 311 LALS---SRTANHQSLQN---------------------------TASGKLVVLDLLLKK 340
+ + NH L N A+GKLV++D LL K
Sbjct: 732 INTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAMIQAAGKLVLIDKLLPK 791
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
L GH+VL+F+QM + LDIL+D+L R+Y+YER+DG +R R AAI F +
Sbjct: 792 LIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDS---- 847
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIGQ V
Sbjct: 848 -------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 900
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDRE-----VKERTAVETDDL 509
L+T ++ E + +A KL L ++ D ++R+ V++ + +E +DL
Sbjct: 901 VYRLITRNSYEREMFDKASLKLGLDKAILQD--INRKGSTNGVQQLSKMEVEDL 952
>gi|380817104|gb|AFE80426.1| chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
Length = 2716
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGGTNGVQQLSKMEVEDL 955
>gi|383422127|gb|AFH34277.1| chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
Length = 2716
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGGTNGVQQLSKMEVEDL 955
>gi|119596382|gb|EAW75976.1| chromodomain helicase DNA binding protein 6, isoform CRA_c [Homo
sapiens]
Length = 2750
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 462 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 521
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 522 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 579
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 580 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 637
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 638 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 696
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 697 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 742
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 743 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 802
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 803 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 862
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 863 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 911
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 912 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 969
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 970 INRKGGTNGVQQLSKMEVEDL 990
>gi|355784481|gb|EHH65332.1| Chromodomain-helicase-DNA-binding protein 6 [Macaca fascicularis]
Length = 2716
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGGTNGVQQLSKMEVEDL 955
>gi|332209064|ref|XP_003253631.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6 [Nomascus leucogenys]
Length = 2722
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 435 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 494
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 495 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 552
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 553 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 610
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 611 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 669
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 670 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 715
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 716 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 775
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 776 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 835
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 836 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 884
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 885 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 942
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 943 INRKGGTNGVQQLSKMEVEDL 963
>gi|345790058|ref|XP_534421.3| PREDICTED: chromodomain-helicase-DNA-binding protein 6 isoform 1
[Canis lupus familiaris]
Length = 2715
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGSTNGVQQLSKMEVEDL 955
>gi|402882510|ref|XP_003904783.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Papio
anubis]
Length = 2716
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 285/534 (53%), Gaps = 86/534 (16%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ + +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FLS + F + GPF
Sbjct: 454 EYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEI-FLRGIHGPF 512
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL-P 148
L++ PLS W E +T ++ + Y G + R+ I++ YE V +Q + +S +
Sbjct: 513 LIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQ--YEMVYRDAQGNPLSGVFK 569
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F V++TT++++L D L +I W IIDEA RLKN + L L+ + ++L+TGT
Sbjct: 570 FHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLK-LMALEHKVLLTGT 628
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QN++ EL++L++F PS F + FL F D K +EQ L+ IL
Sbjct: 629 PLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL----------KTEEQVKKLQSILKPM 678
Query: 269 MLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRK------------ELPKL 310
MLRR K + + L P E+T +QKK Y +IL K +P L
Sbjct: 679 MLRRLKDDVEK----NLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNL 734
Query: 311 LALS---SRTANHQSLQN---------------------------TASGKLVVLDLLLKK 340
+ + NH L N A+GKLV++D LL K
Sbjct: 735 INTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPK 794
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
L GH+VL+F+QM + LDIL+D+L R+Y+YER+DG +R R AAI F +
Sbjct: 795 LIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDS---- 850
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIGQ V
Sbjct: 851 -------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 903
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDRE-----VKERTAVETDDL 509
L+T ++ E + +A KL L V+ D ++R+ V++ + +E +DL
Sbjct: 904 VYRLITRNSYEREMFDKASLKLGLDKAVLQD--INRKGGTNGVQQLSKMEVEDL 955
>gi|395505398|ref|XP_003757029.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Sarcophilus
harrisii]
Length = 2721
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 190/534 (35%), Positives = 283/534 (52%), Gaps = 86/534 (16%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FLS + F GPF
Sbjct: 455 EYKNNNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEI-FLMGIHGPF 513
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL-P 148
L++ PLS W E +T ++ + Y G + R+ I++ YE + +Q + +S +
Sbjct: 514 LIIAPLSTITNWEREFRTWT-EMNAIVYHGSQISRQMIQQ--YEMLYRDAQGNPLSGIFK 570
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
F V++TT++++L D L +I W IIDEA RLKN + L L+ + ++L+TGT
Sbjct: 571 FHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLK-LMALEHKVLLTGT 629
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QN++ EL++L++F PS F + FL F D K +EQ L+ IL
Sbjct: 630 PLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL----------KTEEQVKKLQSILKPM 679
Query: 269 MLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE------------LPKL 310
MLRR K + + L P E+T +QKK Y +IL K +P L
Sbjct: 680 MLRRLKDDVEK----NLAPKQETIIEVELTNIQKKYYRAILEKNFSFLAKGANQHNMPNL 735
Query: 311 LALS---SRTANHQSLQN---------------------------TASGKLVVLDLLLKK 340
+ + NH L N A+GKLV++D LL K
Sbjct: 736 INTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDSLDFQLQAMIQAAGKLVLIDKLLPK 795
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
L GH+VL+F+QM + LDIL+D+L R+Y+YER+DG +R R AAI F +
Sbjct: 796 LIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDS---- 851
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIGQ V
Sbjct: 852 -------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 904
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDRE-----VKERTAVETDDL 509
L+T ++ E + +A KL L V+ D ++R+ V++ T +E +DL
Sbjct: 905 VYRLITRNSYEREMFDKASLKLGLDKAVLQD--INRKGSTNGVQQLTKIEVEDL 956
>gi|395828998|ref|XP_003787648.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Otolemur
garnettii]
Length = 2711
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 425 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 484
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 485 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 542
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 543 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 600
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 601 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 659
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 660 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 705
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 706 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKSHS 765
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 766 PDALDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 825
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 826 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 874
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 875 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 932
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 933 INRKGGTNGVQQLSKMEVEDL 953
>gi|301766196|ref|XP_002918518.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like,
partial [Ailuropoda melanoleuca]
Length = 2710
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 420 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 479
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 480 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 537
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 538 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 595
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 596 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 654
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 655 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 700
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 701 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 760
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 761 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 820
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 821 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 869
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 870 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 927
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 928 INRKGSTNGVQQLSKMEVEDL 948
>gi|426331166|ref|XP_004026562.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
2 [Gorilla gorilla gorilla]
Length = 798
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 218/623 (34%), Positives = 305/623 (48%), Gaps = 112/623 (17%)
Query: 106 AKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGF 165
A+F P L + Y G++E+R +++ + K++S F VLLTTY++ L D F
Sbjct: 15 ARFAPGLSCVTYAGDKEERACLQQDL----KQES--------CFHVLLTTYEICLKDASF 62
Query: 166 LSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCM 225
L PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L EL++L+ F
Sbjct: 63 LKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQELYSLLSFVE 121
Query: 226 PSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHL 283
P +F + F+ ++D S E L +L F+LRR K ++
Sbjct: 122 PDLFSKEEVGDFIQRYQDIEKES---------ESAGELHKLLQPFLLRRVKAEVA----T 168
Query: 284 MLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT----------- 326
LP TE+ + LQKK Y +IL K+L A + TA LQN
Sbjct: 169 ELPRKTEVVIYHGMSALQKKYYKAILMKDLD---AFENETAKKVKLQNILSQLRKCVDHP 225
Query: 327 -------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLEL 367
ASGKL +LD LL LY+ GHRVLLF+QMTQ LDILQD+++
Sbjct: 226 YLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAILYSGGHRVLLFSQMTQMLDILQDYMDY 285
Query: 368 RKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVA 427
R YSYER+DGS+R EER AI++F G FVF++STRAGGVG+NL A
Sbjct: 286 RGYSYERVDGSVRGEERHLAIKNF-------------GQQPIFVFLLSTRAGGVGMNLTA 332
Query: 428 ADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHN 487
ADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A KL+L++
Sbjct: 333 ADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNM 392
Query: 488 VVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNEESDDLRLSGLNSMVEKVI 545
++ ++ A L I+ FGL L + +E D + G + V
Sbjct: 393 IIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETKDGQWVS 452
Query: 546 AMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASE 605
G ++ N + L E D S S+ L ++ +EK +
Sbjct: 453 DALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQ-KTLLEKTSQEGR 511
Query: 606 SSSN-------TIAESGRRR----SP---EDKQRK-----------LEAARRKAEE---- 636
S N + E +R SP ED+Q+K +E +R+ EE
Sbjct: 512 SLRNRGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHK 571
Query: 637 KKLAKWEANGYQSLSVKTPVCSP 659
KK+A WE+N YQS + + P
Sbjct: 572 KKMAWWESNNYQSFCLPSEESEP 594
>gi|154315192|ref|XP_001556919.1| hypothetical protein BC1G_04635 [Botryotinia fuckeliana B05.10]
Length = 1357
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 177/487 (36%), Positives = 257/487 (52%), Gaps = 76/487 (15%)
Query: 18 DERDGQTPV-DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL 76
D R P+ + ++ + +L+ Q+ GL++L + NV+L DEMGLGKT+Q ++F+
Sbjct: 445 DTRSPHVPIREQPDYIMNGQLRDFQITGLNFLAYNWCKNKNVILADEMGLGKTVQTVAFM 504
Query: 77 SYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVK 136
++L + GP LV+ PL+ W + P L + Y G+ R+ IR YE +
Sbjct: 505 NWLHNDRGQEGPHLVVVPLTTIPAWADTFDNWAPSLNYVVYNGKESSRQIIRE--YELLV 562
Query: 137 EQSQMSNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREH 196
+ N F+VLLT+Y+ +L D FLSQI W + +DEA RLKN S LY L +
Sbjct: 563 D----GNPKRPKFNVLLTSYEYILADSLFLSQIKWQFMAVDEAHRLKNRESQLYLKLLD- 617
Query: 197 FLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKE 256
F P RLL+TGTP+QN L EL ALM F MP + T + A E
Sbjct: 618 FKAPSRLLITGTPVQNTLGELSALMDFLMPGELEIEDNMDLTDEAA------------GE 665
Query: 257 QFTSLKGILSAFMLRRTKQKLVECGHLMLPPLT------EITVLQKKVYASILRKEL--- 307
+ +L + ++LRRTKQK+ LPP + E++ +Q Y +IL +
Sbjct: 666 KIAALTTKIQPYILRRTKQKVEND----LPPKSEKIIRVELSDVQLDYYKNILTRNYAAL 721
Query: 308 ------PKLLALS-----SRTANHQSLQNTA---------------------SGKLVVLD 335
PK L+ + +NH + A SGK+++LD
Sbjct: 722 NEGSKGPKQSLLNIMMELKKASNHPYMFPNAEEKILKGSERRDDQLKGLIASSGKMMLLD 781
Query: 336 LLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQS 395
LL KL HRVL+F+QM + LDIL D+L+LR Y ++RLDG++ A R AI HF+
Sbjct: 782 RLLAKLKKDNHRVLIFSQMVKMLDILGDYLQLRGYQFQRLDGTVAAGPRRQAIDHFN--- 838
Query: 396 AIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQ 455
A G++ F F++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ
Sbjct: 839 --------ADGSNDFCFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQ 890
Query: 456 MNHVLSI 462
++I
Sbjct: 891 KKPFITI 897
>gi|62733578|gb|AAX95695.1| SNF2 family N-terminal domain, putative [Oryza sativa Japonica
Group]
gi|108710803|gb|ABF98598.1| Swi2/Snf2-related protein DDM1, putative [Oryza sativa Japonica
Group]
Length = 811
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 167/469 (35%), Positives = 262/469 (55%), Gaps = 40/469 (8%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q++G+ WLI + G+N +L D+MGLGKT+Q I FL++LK + GP+L++ P
Sbjct: 280 GKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLD-GPYLIIAP 338
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS WV+E+++F P + + Y G++ R IRR M + F +++T
Sbjct: 339 LSTLSNWVNEISRFVPSMTGVIYHGDKAARAEIRRKF---------MPKTTGPNFPLIVT 389
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
+Y++ + D L+ W Y I+DE RLKN +L L+ M +LL+TGTP+QNNL
Sbjct: 390 SYEMAMSDAKQLAHYKWKYVIVDEGHRLKNSKCILLRELK-RLPMDNKLLLTGTPLQNNL 448
Query: 215 SELWALMHFCMPSVFGTLNQFLSTF----KDAVHSSSAPKRGKIKEQFTSLKGILSAFML 270
+ELW+L++F +P +F + +F S F K + + + + L IL F+L
Sbjct: 449 AELWSLLNFILPDIFSSHQEFESWFDFCAKGGEEEQEESEEKRKVDVVSKLHAILRPFLL 508
Query: 271 RRTKQKLVECGHLMLPPLTEITVL------QKKVYASILRKELPKLLALSSRTANHQSLQ 324
RR K+ + MLP EI + QK++ ++ + + L S + ++
Sbjct: 509 RRMKEDV----EHMLPRKKEIIIYANMTNHQKEIQNHLVEQTFDEYLHEKSEIGMYPPVE 564
Query: 325 N--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAE 382
GK +L+ LL L H+VL+F+Q T+ LDI++ +LE + R+DGS++ E
Sbjct: 565 KLLEQCGKFQLLNRLLNLLLARKHKVLIFSQWTKVLDIIEYYLETKGLQVCRIDGSVKLE 624
Query: 383 ERFAAIRHFS-VQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQ 441
ER I F+ + S++ +F++STRAGG+G+NL +ADT I Y+ DWNPQ
Sbjct: 625 ERRRQIAEFNDLNSSMN------------IFILSTRAGGLGINLTSADTCILYDSDWNPQ 672
Query: 442 VDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG 490
+D QA+ R HRIGQ V L T H+VE I+++A KLRL H V+G
Sbjct: 673 MDLQAMDRCHRIGQTRPVHVYRLATSHSVEGRIIKKAFGKLRLEHVVIG 721
>gi|325181644|emb|CCA16095.1| KIAA1416 protein putative [Albugo laibachii Nc14]
Length = 1788
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 181/505 (35%), Positives = 264/505 (52%), Gaps = 73/505 (14%)
Query: 31 FGVTA--ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQ--MSP 86
FG+ +L+ +Q+EGL+WL+ + +L DEMGLGKT+Q ++FL L+
Sbjct: 433 FGIDGSLQLRIYQLEGLNWLLWNWYNERPSILADEMGLGKTIQTLAFLDRLRVDPKIQCR 492
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GPFL++ PLS+ W +E +T + + Y G E R IR + + E + P
Sbjct: 493 GPFLIVAPLSLIVQWQNECETWTC-MNCIVYHGNTEAREVIREYEFYFMNENGKPDKKKP 551
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
F +++TTY+V + D FLS+I W I+DEA RLKN SS L LR +L+T
Sbjct: 552 FRFHIIVTTYEVAIKDIAFLSKIRWRCLIVDEAHRLKNQSSRLVEQLRS-LRRDHCVLLT 610
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QN ELWAL++F F ++ +FL F D +H + Q L +L
Sbjct: 611 GTPLQNKTEELWALLNFLDTRSFPSVEEFLDKFGD-LHQA---------RQVADLHKMLK 660
Query: 267 AFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE------------LP 308
++LRR K+ + + LPP E+T +QK+ Y +I K +P
Sbjct: 661 PYLLRRVKEDVEKS----LPPKEETIIEVELTPVQKQWYRAIYEKNTSFLSRGGNPNNIP 716
Query: 309 KLLALS---SRTANHQSLQN---------------------TASGKLVVLDLLLKKLYNS 344
L+ + + NH L N GK+V+LD LL +L
Sbjct: 717 NLMNVMMELRKCCNHPYLNNGVEEILNEGLRTERERHEMMVKCCGKMVLLDKLLPRLKEG 776
Query: 345 GHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEA 404
GH+VL+F+QM + LDI++D+L ++YERLDG+IR +R AA+ F V+ +R
Sbjct: 777 GHKVLIFSQMVRVLDIIEDYLRFLGHAYERLDGNIRGNDRQAAVNRF-VKEEYKR----- 830
Query: 405 GGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINL 464
FV ++ST+AGG+GLNL AADTV+ ++ DWNPQ D QA RAHRIGQ + V L
Sbjct: 831 -----FVMLLSTKAGGLGLNLTAADTVVIFDSDWNPQNDLQAQARAHRIGQTHSVKIYRL 885
Query: 465 VTEHTVEEVIMRRAERKLRLSHNVV 489
+T T E + +A KL L V+
Sbjct: 886 ITRKTYEMHMFHKASLKLGLDKAVL 910
>gi|428182366|gb|EKX51227.1| hypothetical protein GUITHDRAFT_66145, partial [Guillardia theta
CCMP2712]
Length = 813
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 208/650 (32%), Positives = 319/650 (49%), Gaps = 108/650 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V L+ +Q++GL WL+ Y ++ +L DEMGLGKT+Q +S ++YL + GPFL++
Sbjct: 175 VGGSLRQYQMQGLQWLVSLYNNKISGVLADEMGLGKTIQIVSLIAYLMEVKGVNGPFLIV 234
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLSV D WV E ++P ++ + Y G + R+ +++ ++ F+V+
Sbjct: 235 SPLSVIDNWVREFDAWSPTVKKIIYYGSKPSRKKMQQECHKGT-------------FNVM 281
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LT+Y+ V+ D F+S+I W Y I+DE R+KN S L L F R+L+TGTP+QN
Sbjct: 282 LTSYEFVVKDASFMSKINWVYIIVDEGHRMKNGKSRLTTTLSTKFPSKYRILITGTPLQN 341
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL+ELW+L++F +P +F + F F + ++ E+ L +L
Sbjct: 342 NLNELWSLLNFLLPDIFRHDSNFEEWFNSGDIMGATGDTNEMDEEERLLLIDRLHQVLRP 401
Query: 268 FMLRRTK-----------QKLVEC----------------GHLMLPPLTEITVLQKKVYA 300
F+LRR K +K+++C G + L P +KK
Sbjct: 402 FLLRRLKSEVEGELKPKVEKVIKCNMSACQWRLYSGIRENGIVALQPSDGTQPTKKKTAT 461
Query: 301 SI---LRK---------ELPKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRV 348
+I LRK E+ L SR+ +SGK +L +L KL ++GHRV
Sbjct: 462 NIMMELRKACNHPYLFCEISSPLTFLSRSTELVR----SSGKFELLYRMLPKLRSTGHRV 517
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F QMT+ +DIL DFL+ + Y RLDGS ++ R I F ++ E Y+
Sbjct: 518 LVFCQMTRLMDILGDFLKACGHRYLRLDGSTDSQRRGELIEIF---NSPESPYA------ 568
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
+F++STRAGG+GLNL AADTVI ++ DWNPQ+D QA RAHRIGQ V + L +
Sbjct: 569 --IFILSTRAGGLGLNLPAADTVIIFDSDWNPQMDMQAQDRAHRIGQTREVRVLRLTCAN 626
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVET--DDLRSIIFGLHLFDPKAINN 526
T+EE I+ +A K L + + + E+ VE + LR I +A N
Sbjct: 627 TLEEDILEKATYKKELGGAAIDGGMFN----EKATVEDRHEFLRKIF-------SRATNT 675
Query: 527 EESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYP 586
++D L +N + + + + +E D HE S +S P
Sbjct: 676 TKADVLSKEAMNQELAR-----------------DEMEFRMFQEHD---HE-LQSRSSQP 714
Query: 587 DL-DEASYRSWVEKFKEASESSSNTIAESGRRRSPEDKQRKLEAARRKAE 635
DL E SW+ K++E ++S++ E R K R + A K E
Sbjct: 715 DLMTEDEVPSWL-KYEEDDKTSASRKKELERAEKASRKSRMRKTASYKEE 763
>gi|410033372|ref|XP_003949535.1| PREDICTED: chromodomain helicase DNA binding protein 1-like [Pan
troglodytes]
Length = 796
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 217/623 (34%), Positives = 307/623 (49%), Gaps = 112/623 (17%)
Query: 106 AKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTYDVVLMDQGF 165
A+F P L + Y G++E+R +++ + K++S+ F VLLTTY++ L D F
Sbjct: 15 ARFAPGLSCVTYAGDKEERACLQQDL----KQESR--------FHVLLTTYEICLKDASF 62
Query: 166 LSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCM 225
L PW ++DEA RLKN SS+L+ L E F + LL+TGTPIQN+L EL++L+ F
Sbjct: 63 LKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLLTGTPIQNSLQELYSLLSFVE 121
Query: 226 PSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHL 283
P +F + F+ ++D K E + L +L F+LRR K ++
Sbjct: 122 PDLFSKEEVGDFIQRYQDIE---------KEPESASELHKLLQPFLLRRVKAEVA----T 168
Query: 284 MLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQSLQNT----------- 326
LP TE+ + LQK+ Y +IL K+L A + TA LQN
Sbjct: 169 ELPKKTEVVIYHGMSALQKRYYKAILMKDLD---AFENETAKKVKLQNILSQLRKCVDHP 225
Query: 327 -------------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLEL 367
ASGKL +LD LL LY+ GHRVLLF+QMTQ LDILQD+++
Sbjct: 226 YLFDGVEPEPFEVGDHLIEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDY 285
Query: 368 RKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVA 427
R YSYER+DGS+R EER AI++F G FVF++STRAGGVG+NL A
Sbjct: 286 RGYSYERVDGSVRGEERHLAIKNF-------------GRQPIFVFLLSTRAGGVGMNLTA 332
Query: 428 ADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHN 487
ADTVIF + D+NPQ D QA RAHRIGQ V I L+ TVEE++ R+A KL+L++
Sbjct: 333 ADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTNM 392
Query: 488 VVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAINNEESDDLRLSGLNSMVEKVI 545
++ ++ A L I+ FGL L + +E D + G + V
Sbjct: 393 IIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEIDLESILGETKDGQWVS 452
Query: 546 AMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASE 605
G ++ N + L E D S S+ L ++ +EK +
Sbjct: 453 DALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSFEQLVNLQ-KTLLEKTSQEGR 511
Query: 606 SSSNT-------IAESGRRR----SP---EDKQRK-----------LEAARRKAEE---- 636
S N + E +R SP ED+Q+K +E +R+ EE
Sbjct: 512 SLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAAAKRRRLIEEKKRQKEEAEHK 571
Query: 637 KKLAKWEANGYQSLSVKTPVCSP 659
KK+A WE+N YQS + + P
Sbjct: 572 KKMAWWESNNYQSFCLPSEESEP 594
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,869,274,949
Number of Sequences: 23463169
Number of extensions: 396923936
Number of successful extensions: 1275294
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13551
Number of HSP's successfully gapped in prelim test: 2238
Number of HSP's that attempted gapping in prelim test: 1199412
Number of HSP's gapped (non-prelim): 33070
length of query: 673
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 523
effective length of database: 8,839,720,017
effective search space: 4623173568891
effective search space used: 4623173568891
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)