BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005858
(673 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 360 bits (924), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 356/703 (50%), Gaps = 113/703 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+ +Q+EG++WL +R+ +LGDEMGLGKT Q I+ YL
Sbjct: 35 DLRQWGLTGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 94
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++E+R +++ + K++S+
Sbjct: 95 EGPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDL----KQESR----- 145
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 146 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 201
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 202 TGTPIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKES---------ESASELHK 252
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 253 LLQPFLLRRVKAEVA----TELPKKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 305
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 306 AKKVKLQNILSQLRKCVDHPYLFDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHR 365
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+++ R YSYER+DGS+R EER AI++F G
Sbjct: 366 VLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 412
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 413 PIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 472
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGL-HLFDPKAIN 525
TVEE++ R+A KL+L++ ++ ++ A L I+ FGL L +
Sbjct: 473 DTVEEIVYRKAASKLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGST 532
Query: 526 NEESDDLRLSGLNSMVEKVIAMRHEQVSGKAGRKFEVNPVALLEESDLLMHESFASATSY 585
+E D + G + V G ++ N + L E D S S+
Sbjct: 533 MDEIDLESILGETKDGQWVSDALPAAEGGSRDQEEGKNHMYLFEGKDYSKEPSKEDRKSF 592
Query: 586 PDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR----SP---EDKQRK----- 626
L ++ +EK + S N + E +R SP ED+Q+K
Sbjct: 593 EQLVNLQ-KTLLEKASQEGRSLRNKGSVLIPGLVEGSTKRKRVLSPEELEDRQKKRQEAA 651
Query: 627 ------LEAARRKAEE----KKLAKWEANGYQSLSVKTPVCSP 659
+E +R+ EE KK+A WE+N YQS + + P
Sbjct: 652 AKRRRLIEEKKRQKEEAEHKKKMAWWESNNYQSFCLPSEESEP 694
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 353 bits (905), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 207/502 (41%), Positives = 285/502 (56%), Gaps = 81/502 (16%)
Query: 27 DAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D ++G+T L+P+Q++G++WL + + +LGDEMGLGKT Q I+ YL
Sbjct: 37 DLRQWGLTGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLND 96
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL+LCPLSV W EM +F P L + Y G++++R +++ + K++S+
Sbjct: 97 EGPFLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDL----KQESR----- 147
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F VLLTTY++ L D FL PW ++DEA RLKN SS+L+ L E F + LL+
Sbjct: 148 ---FHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSE-FSVVFSLLL 203
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGT--LNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKG 263
TGTPIQN+L EL++L+ F P +F + F+ ++D S E + L
Sbjct: 204 TGTPIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKES---------ESASELYK 254
Query: 264 ILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRT 317
+L F+LRR K ++ LP TE+ + LQKK Y +IL K+L A + T
Sbjct: 255 LLQPFLLRRVKAEVA----TELPRKTEVVIYHGMSALQKKYYKAILMKDLD---AFENET 307
Query: 318 ANHQSLQNT------------------------------ASGKLVVLDLLLKKLYNSGHR 347
A LQN ASGKL +LD LL LY+ GHR
Sbjct: 308 AKKVKLQNVLSQLRKCVDHPYLFDGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSKGHR 367
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VLLF+QMTQ LDILQD+L+ R YSYER+DGS+R EER AI++F G
Sbjct: 368 VLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNF-------------GQQ 414
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F F++STRAGGVG+NL AADTVIF++ D+NPQ D QA RAHRIGQ V I L+
Sbjct: 415 PIFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGR 474
Query: 468 HTVEEVIMRRAERKLRLSHNVV 489
TVEE++ R+A KL+L++ ++
Sbjct: 475 DTVEEIVYRKAASKLQLTNTII 496
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 348 bits (894), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 265/749 (35%), Positives = 371/749 (49%), Gaps = 147/749 (19%)
Query: 23 QTPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKF 81
Q P D ++G+T L+ +Q+EG++WL++ + +LGDEMGLGKT Q I+ L YL
Sbjct: 26 QEP-DLQQWGLTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVG 84
Query: 82 SQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQM 141
GPFLVLCPLSV W EM +F P L + Y G++E+R +++ + +++S
Sbjct: 85 RLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDL----RQESG- 139
Query: 142 SNVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
F VLLTTY++ L D FL W +DEA RLKN SS+L+ L E F
Sbjct: 140 -------FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSE-FSAVF 191
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVFG--TLNQFLSTFKDAVHSSSAPKRGKIKEQFT 259
RLL+TGTPIQN+L EL++L+ P +F + F+ ++D S + +
Sbjct: 192 RLLLTGTPIQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSA---------S 242
Query: 260 SLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLAL 313
L +L F+LRR K ++ LP TE+ V LQKK Y +IL K+L A
Sbjct: 243 ELHRLLQPFLLRRVKAQVA----TELPKKTEVVVYHGMSALQKKYYKAILMKDLD---AF 295
Query: 314 SSRTANHQSLQNT------------------------------ASGKLVVLDLLLKKLYN 343
+ TA LQN ASGKL +LD LL LY+
Sbjct: 296 ENETAKKVKLQNILTQLRKCVDHPYLFDGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYS 355
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
GHRVLLF+QMT LDILQD+++ R YSYER+DGS+R EER AI++F
Sbjct: 356 GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNF------------ 403
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
G FVF++STRAGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I
Sbjct: 404 -GNQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIR 462
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLFDPK 522
L+ TVEE++ R+A KL+L++ V+ ++ +A L I+ FGL K
Sbjct: 463 LIGRDTVEEIVYRKAASKLQLTNMVIEGGHFTPGAQKPSAEADFQLSEILKFGLD----K 518
Query: 523 AINNEES--DDLRLSGL---------------NSMVEKVIAMRHEQVSGKAGRKFEVNPV 565
+++E S +D+ L + + ++ E+ S R +E N +
Sbjct: 519 LLSSEGSSMEDIDLKSILGETKDGQWTPDALPAAAAAGGGSLEPEEGSELESRSYE-NHM 577
Query: 566 ALLEESDLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNT-------IAESGRRR 618
L E D S S+ L ++ +EK + N +AE +R
Sbjct: 578 YLFEGRDYSKEPSKEDRKSFEQLVNLQ-KTLLEKTSHGGRTLRNKGSVLIPGLAEGPIKR 636
Query: 619 ----SPED-----KQRKLEAARRK-------------AEEKKLAKWEANGYQSLSVKTPV 656
SPE+ K+R+ AA+RK KK+A WE+NGYQS + +
Sbjct: 637 KKILSPEELEDRRKKRQEAAAKRKRLMEEKRKEKEEAEHRKKMAWWESNGYQSFCLSSED 696
Query: 657 CS----PGGDMMS--------DSGSVQFV 673
GGD S DS S+ +V
Sbjct: 697 SELEDLEGGDESSAELAYEDLDSTSINYV 725
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 335 bits (860), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 254/725 (35%), Positives = 372/725 (51%), Gaps = 134/725 (18%)
Query: 24 TPVDAAEFGVTA-ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFS 82
T D ++G+ A L+P+Q++G+ WL +LGDEMGLGKT Q IS L+Y + S
Sbjct: 21 TENDLKKWGLGAIHLRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGS 80
Query: 83 QMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMS 142
GPFLVLCPL+V + W E+ +F P L V+ Y G++E+R +++
Sbjct: 81 LKMNGPFLVLCPLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQ------------- 127
Query: 143 NVSPLP-FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPR 201
N+ P F VLLTTY++ L D +L W ++DEA RLKN S+L+ L+E F +
Sbjct: 128 NLKSDPRFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKE-FTVGF 186
Query: 202 RLLMTGTPIQNNLSELWALMHFCMPSVF--GTLNQFLSTFKDAVHSSSAPKRGKIKEQFT 259
R+L+TGTPIQNNL E+++L+ F PSVF + F++ + D + + A
Sbjct: 187 RVLLTGTPIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYAD-IQTEPA--------LVD 237
Query: 260 SLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLAL 313
L +L F+LRR K ++ LP TE+ V LQK+ Y +IL ++L
Sbjct: 238 ELHQVLQPFLLRRVKAEVAA----ELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTD 293
Query: 314 SS-------------RTANHQSLQN--------------TASGKLVVLDLLLKKLYNSGH 346
S + +H L + ASGKL +LD +L L GH
Sbjct: 294 QSTKTRLLNVLMQLRKCVDHPYLFDGVEPEPFEMGEHLVEASGKLSLLDSMLAYLQEGGH 353
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
VLLF+QMT+ LDILQD+LE R YSYERLDGS+R EER AI++FS +
Sbjct: 354 HVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFSTK------------ 401
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
D F+F++ST+AGGVG+NL AADTVIF + D+NPQ D QA RAHRIGQ V I L+
Sbjct: 402 -DVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLG 460
Query: 467 EHTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHLFDPKAIN 525
T+EE+I RA KLRL+ V+ + + ++A L I+ FG+ K ++
Sbjct: 461 RDTIEEIIYSRAVSKLRLTDTVIEEGRFSLLDQAQSAASGLQLSEILKFGV----DKLLS 516
Query: 526 NEESD----DLRLS-GLNSMVEKVIAMRHEQVSGKA-----------------GRKFEVN 563
+EES DL+L G + + + H +++ G+ + +
Sbjct: 517 SEESSVQDVDLQLILGQSRDGQWLTDEEHAKLNESNEEEDEDMEGQNHMYYFEGKDYSKD 576
Query: 564 PVALLEES-DLLMHESFASATSYPDLDEASYRSWVEKFKEASESSSNTIAESGRRRSP-- 620
P A E++ +LL+ + FA ++++A + K A S S + R++ P
Sbjct: 577 PSAEDEKTFELLLEKQFA------EMEDAEKEGRALRNK-AGVSLSGPLINPARKKRPLT 629
Query: 621 --------------EDKQRKLEAARRKAEE-----KKLAKWEANGYQSLSVKTPVCSPGG 661
K+ KL+ R+K +E KK+A W++ GY+SL + V S G
Sbjct: 630 EAELEERRQKRQAAAAKRAKLQEERKKQQEELNYKKKMAWWDSCGYRSLCLPR-VDSEGE 688
Query: 662 DMMSD 666
DM D
Sbjct: 689 DMEPD 693
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 333 bits (853), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 199/493 (40%), Positives = 273/493 (55%), Gaps = 68/493 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 183 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 242
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 243 TLHNWMNEFKRWVPSLRVICFVGDKDARAAFIR------------DEMMPGEWDVCVTSY 290
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 291 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 349
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 400
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 401 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 456
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+VVLD LL KL G RVL+F+QMT+ LD
Sbjct: 457 RKCCNHPYLFDGAEPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLD 516
Query: 360 ILQDFLELRKYSYERLDGSIRAEER---FAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
IL+D+ R Y Y RLDG EER F + + AIE A + F+FM+ST
Sbjct: 517 ILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAF--NAPNSSKFIFMLST 574
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVE 634
Query: 477 RAERKLRLSHNVV 489
RAE KLRL V+
Sbjct: 635 RAEIKLRLDSIVI 647
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 329 bits (843), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 195/490 (39%), Positives = 270/490 (55%), Gaps = 74/490 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q+ GL+WLI Y GVN +L DEMGLGKTLQ I+ L YLK + PGP +VL P S
Sbjct: 187 LRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKS 246
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W++E ++ P L V+ +VG+++ R R + P +DV +T+Y
Sbjct: 247 TLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIR------------DEMMPGEWDVCVTSY 294
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
++V+ ++ + W Y +IDEA R+KN S L ++RE F RLL+TGTP+QNNL E
Sbjct: 295 EMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRE-FKSTNRLLLTGTPLQNNLHE 353
Query: 217 LWALMHFCMPSVFGTLNQFLSTF--KDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
LWAL++F +P VF + + F S F K+ + +R L +L F+LRR K
Sbjct: 354 LWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVER---------LHAVLKPFLLRRIK 404
Query: 275 QKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLALS 314
+ + LPP EI + +Q++ Y IL K+ L +L
Sbjct: 405 TDVEKS----LPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQL 460
Query: 315 SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
+ NH L + A SGK+V LD LL ++ G RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFDGAEPGPPYTTDEHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+ R Y Y RLDG EER AI F+ A + F+FM+STRAG
Sbjct: 521 ILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFN-----------APNSSKFIFMLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL +AD VI Y+ DWNPQVD QA+ RAHRIGQ V L+T++TVEE I+ RAE
Sbjct: 570 GLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAE 629
Query: 480 RKLRLSHNVV 489
KLRL V+
Sbjct: 630 IKLRLDSIVI 639
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 327 bits (839), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 196/494 (39%), Positives = 281/494 (56%), Gaps = 68/494 (13%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G EL+ +Q+EGL+WL + +V+L DEMGLGKT+Q ISFLSYL GPFL+
Sbjct: 479 GENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLI 538
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDV 151
+ PLS W E + P++ V+ Y+G+ R IR YE + Q++ L F+
Sbjct: 539 VVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIRE--YEWIHSQTKR-----LKFNA 591
Query: 152 LLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQ 211
L+TTY+++L D+ L I W + +DEA RLKN S+LY L + F RLL+TGTP+Q
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQ 650
Query: 212 NNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFML 270
N+L ELW+L+HF MP F +F F++ GK +E + SL +L F+L
Sbjct: 651 NSLKELWSLLHFIMPEKF----EFWEDFEE--------DHGKGRENGYQSLHKVLEPFLL 698
Query: 271 RRTKQKLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALSSR------------ 316
RR K+ + + + + E++ LQK+ Y IL + K LA +R
Sbjct: 699 RRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNY-KALAKGTRGSTSGFLNIVME 757
Query: 317 ---TANHQSL-----QNT-------------ASGKLVVLDLLLKKLYNSGHRVLLFAQMT 355
NH L +N +SGKL++LD LL +L G+RVL+F+QM
Sbjct: 758 LKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMV 817
Query: 356 QTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIS 415
+ LDIL ++L ++ Y ++RLDGSI+ E R A+ HF+ A G++ F F++S
Sbjct: 818 RMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFN-----------ADGSEDFCFLLS 866
Query: 416 TRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIM 475
TRAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ TVEE I+
Sbjct: 867 TRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEII 926
Query: 476 RRAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 927 ERAKKKMVLDHLVI 940
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 327 bits (837), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 187/499 (37%), Positives = 283/499 (56%), Gaps = 69/499 (13%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
++ F + +L+ +QV+GL+WLI + ++ +L DEMGLGKTLQ ISFL YL++ +
Sbjct: 174 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GPFL++ P S D W E K+TP + VL G+++ R +I R + +
Sbjct: 234 GPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEAR---------- 283
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
FDVL+T+Y++V+ ++ L ++ W Y +IDEA R+KN S L ++R F RLL+T
Sbjct: 284 --FDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIR-LFYSKNRLLIT 340
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELWAL++F +P +FG F F+ ++S + + +Q L +L+
Sbjct: 341 GTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE---QNNSEQDQEIVIQQ---LHSVLN 394
Query: 267 AFMLRRTKQKLVECGHLMLPPLTE-----ITVLQKKVYASILRKEL-------------P 308
F+LRR K + +LP + +T +Q + Y S+L K++
Sbjct: 395 PFLLRRVK---ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKT 451
Query: 309 KLLALS---SRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
+LL + + NH L A SGK+++LD LLK+L G RVL+
Sbjct: 452 RLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLI 511
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+QM++ LDIL+D+ R + Y R+DGS EER AI ++ ++ + F
Sbjct: 512 FSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNS-----------EKF 560
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
VF+++TRAGG+G+NLV ADTVI ++ DWNPQ D QA+ RAHRIGQ V VTE+ +
Sbjct: 561 VFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAI 620
Query: 471 EEVIMRRAERKLRLSHNVV 489
EE ++ RA +KLRL V+
Sbjct: 621 EEKVIERAAQKLRLDQLVI 639
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 194/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 169 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 228
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE K+ P L + +G++EQR R + + P
Sbjct: 229 GPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 276
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 277 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 335
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 336 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 388
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 389 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 444
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 445 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 504
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 505 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 553
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 554 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 613
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 614 ERIVERAEMKLRLDSIVI 631
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 325 bits (833), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 193/498 (38%), Positives = 276/498 (55%), Gaps = 70/498 (14%)
Query: 27 DAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSP 86
D+ + +L+ +QV GL+WLI Y G+N +L DEMGLGKTLQ IS L Y+K + P
Sbjct: 170 DSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 229
Query: 87 GPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSP 146
GP +VL P S W+SE ++ P L + +G++EQR R + + P
Sbjct: 230 GPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDV------------LLP 277
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
+DV +T+Y++++ ++ + W Y +IDEA R+KN S L ++RE F RLL+T
Sbjct: 278 GEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVRE-FKTTNRLLLT 336
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL ELW+L++F +P VF + + F S F +++ K+ E+ L +L
Sbjct: 337 GTPLQNNLHELWSLLNFLLPDVFNSADDFDSWF----DTNNCLGDQKLVER---LHMVLR 389
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE-------------- 306
F+LRR K + + LPP E+ + +Q++ Y IL K+
Sbjct: 390 PFLLRRIKADVEKS----LPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR 445
Query: 307 LPKLLALSSRTANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLF 351
L +L + NH L + T SGK+VVLD LL KL G RVL+F
Sbjct: 446 LLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QMT+ LDIL+D+ R Y Y RLDG +ER +I ++ ++ + FV
Sbjct: 506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK-----------FV 554
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
FM+STRAGG+G+NL AD VI Y+ DWNPQVD QA+ RAHRIGQ V +T++TVE
Sbjct: 555 FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
Query: 472 EVIMRRAERKLRLSHNVV 489
E I+ RAE KLRL V+
Sbjct: 615 ERIVERAEMKLRLDSIVI 632
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 323 bits (828), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 217/585 (37%), Positives = 313/585 (53%), Gaps = 87/585 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFL-SYLKFSQMSPGPFLVLCPL 95
L+ +Q++GL+WL+ + +V+L DEMGLGKT+Q I FL S K + GPFL + PL
Sbjct: 528 LRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLY-GPFLCVVPL 586
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E + P + V+ Y+G+ + R I++ YE E S+ L F+ +LTT
Sbjct: 587 STMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQ--YEWQFESSKR-----LKFNCILTT 639
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y++VL D+ FL + W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L
Sbjct: 640 YEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKE-FDTNHRLLITGTPLQNSLK 698
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQ 275
ELWAL+HF MP F T F V +A +G +T L L ++LRR K+
Sbjct: 699 ELWALLHFIMPDKFDTWENF------EVQHGNAEDKG-----YTRLHQQLEPYILRRVKK 747
Query: 276 KLVECGHLMLPPL--TEITVLQKKVYASILRKELPKLLALS--------------SRTAN 319
+ + + + E+T LQK+ Y IL K L + N
Sbjct: 748 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDALRKGKRGSTSTFLNIVIELKKCCN 807
Query: 320 HQSL------------QNTA-------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
H +L Q+ A SGKLV+LD LL +L +GHRVL+F+QM + LD+
Sbjct: 808 HAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDV 867
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L D+L+ R + ++RLDGSI+ E R A+ HF+ + G+ F F++STRAGG
Sbjct: 868 LADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAE-----------GSQDFCFLLSTRAGG 916
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA++
Sbjct: 917 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVERAKQ 976
Query: 481 KLRLSHNVV------GDDVVDREVKERTA----VETDDLRSII-FGL-HLFDPKAINNEE 528
K+ L H V+ G V+D+ ++ DDL +I+ FG LF + +E
Sbjct: 977 KMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELFK----DEQE 1032
Query: 529 SDDLRLSGLNSMVEKVIAMRHEQVSGKAG---RKFEVNPVALLEE 570
DD + ++ ++ + R+E A F+V +A EE
Sbjct: 1033 HDDDLVCDIDEILRRA-ETRNEDPEMPADDLLSAFKVASIAAFEE 1076
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 321 bits (823), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 201/554 (36%), Positives = 297/554 (53%), Gaps = 78/554 (14%)
Query: 34 TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLC 93
+ E++ +Q+ GL+W+I Y G+N +L DEMGLGKTLQ IS L YLK + GP +V+
Sbjct: 125 SGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIV 184
Query: 94 PLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLL 153
P S WV+E K+ P L + +G+++ R R + + P +DV +
Sbjct: 185 PKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDV------------LMPGEWDVCV 232
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
T+Y++ + ++ + W Y +IDEA R+KN S L +LRE F RLL+TGTP+QNN
Sbjct: 233 TSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEILRE-FKTANRLLITGTPLQNN 291
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
L ELWAL++F +P VF + F F ++++ + T L +L F+LRR
Sbjct: 292 LHELWALLNFLLPDVFNSSEDFDEWF----NTNTCLGDDAL---ITRLHAVLKPFLLRRL 344
Query: 274 KQKLVECGHLMLPPLTEITV------LQKKVYASILRKE--------------LPKLLAL 313
K ++ + L P E+ + +Q+ Y +L K+ L +L
Sbjct: 345 KAEVEK----RLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVNGAGKVEKMRLQNILMQ 400
Query: 314 SSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTL 358
+ NH L + A SGK+ +LD LL KL G RVL+F+QMT+ L
Sbjct: 401 LRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRML 460
Query: 359 DILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRA 418
DIL+D+ R Y+Y RLDG E+R I+ F++ ++ + F+FM+STRA
Sbjct: 461 DILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAK-----------FLFMLSTRA 509
Query: 419 GGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRA 478
GG+G+NL AD VI Y+ DWNPQ+D QA+ RAHRIGQ V L+TE TVEE I+ RA
Sbjct: 510 GGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERA 569
Query: 479 ERKLRLSHNVV-GDDVVDREVKERTAVETDDLRSII-FGLH-LFDPKA--INNEESDDLR 533
E KLRL V+ G +VD + + D++ +II FG + +F K I +E+ D +
Sbjct: 570 EVKLRLDKMVIQGGRLVDNRSNQ---LNKDEMLNIIRFGANQVFSSKETDITDEDIDVIL 626
Query: 534 LSGLNSMVEKVIAM 547
G E+ A+
Sbjct: 627 ERGEAKTAEQKAAL 640
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/516 (37%), Positives = 274/516 (53%), Gaps = 65/516 (12%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L P+Q+EG++WL + G + +L DEMGLGKT+Q+++FL L + GPFL+ PLS
Sbjct: 616 LHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLS 675
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVK-------EQSQMSNVSPLPF 149
W E + P V+ YVG+RE R IR + V + S++ + L F
Sbjct: 676 TIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKF 735
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
VLLT+Y+ + MD+ LS I W ++DEA RLKN S + LRE+ + R+L+TGTP
Sbjct: 736 HVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQ-YRVLLTGTP 794
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL+ L++F P F L F + F + ++Q L +L M
Sbjct: 795 LQNNLEELFHLLNFLAPDRFNQLESFTAEFSEISK----------EDQIEKLHNLLGPHM 844
Query: 270 LRRTKQKLVEC--GHLMLPPLTEITVLQKKVYASILRKELPKLLALSSRT---------- 317
LRR K ++ L E++ +QKK Y +IL + L + T
Sbjct: 845 LRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVKNGGTQMSLINIIME 904
Query: 318 ----ANHQSLQNTA--------------------SGKLVVLDLLLKKLYNSGHRVLLFAQ 353
NH L A +GK V+L +L+KL + GHRVL+F+Q
Sbjct: 905 LKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKMLRKLKDGGHRVLIFSQ 964
Query: 354 MTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFM 413
MT LDIL+DF ++ Y YER+DGSI ++R Q AI+R A G FVF+
Sbjct: 965 MTMMLDILEDFCDVEGYKYERIDGSITGQQR---------QDAIDRY--NAPGAKQFVFL 1013
Query: 414 ISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEV 473
+STRAGG+G+NL ADTVI Y+ DWNP D QA RAHR+GQ + V+ VT+ +VEE
Sbjct: 1014 LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEER 1073
Query: 474 IMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDL 509
I A++K+ L+H VV + ++ K + E DD+
Sbjct: 1074 ITSVAKKKMLLTHLVVRAGLGAKDGKSMSKTELDDV 1109
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 316 bits (810), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 193/517 (37%), Positives = 282/517 (54%), Gaps = 69/517 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +L+P+Q++G++WL+ + + +L DEMGLGKTLQ ISFL YL++ + PGPFLV+
Sbjct: 192 VNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVI 251
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S + W+ E+ ++TP + G++E+R + + + FDV+
Sbjct: 252 APKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQ------------KKLLGCDFDVV 299
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+ +Y++++ ++ L +I W Y IIDEA R+KN S+L VLRE F RLL+TGTP+QN
Sbjct: 300 IASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLRE-FTSRNRLLITGTPLQN 358
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F F F S+ + KI +Q L +L F+LRR
Sbjct: 359 NLHELWALLNFLLPDIFSDAQDFDDWFS---SESTEEDQDKIVKQ---LHTVLQPFLLRR 412
Query: 273 TKQKLVECGHLMLPPLT---EITVLQKKVYASILRKEL-------------PKLLALS-- 314
K VE L L ++ +QKK Y IL K+L +LL +
Sbjct: 413 IKSD-VETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQ 471
Query: 315 -SRTANHQSLQNTAS-GKLVVLDLLLKKLYNS----------------GHRVLLFAQMTQ 356
+ NH L + A G D L +YN+ G RVL+F+QM++
Sbjct: 472 LRKCCNHPYLFDGAEPGPPYTTDEHL--VYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSR 529
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL+D+ R Y Y R+DGS E+R AI ++ A + FVF+++T
Sbjct: 530 LLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYN-----------APDSKKFVFLLTT 578
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +AD V+ Y+ DWNPQ D QA+ RAHRIGQ V LVT+++VEE I+
Sbjct: 579 RAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 638
Query: 477 RAERKLRLSHNVVGDDVVDREVKERTAVETDDLRSII 513
RA +KLRL V+ + + KE A D L S+I
Sbjct: 639 RATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMI 675
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 193/524 (36%), Positives = 278/524 (53%), Gaps = 82/524 (15%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
V+ A V LK +Q++GL WL+ Y +N +L DEMGLGKT+Q IS ++YL +
Sbjct: 762 VEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKV 821
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GP+L++ PLS WV E K+ P + V+ Y G + RR + Q+QM
Sbjct: 822 MGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLL----------QNQMRATK 871
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F+VLLTTY+ V+ D+ L++I W Y IIDE R+KN L VL H++ P RLL+
Sbjct: 872 ---FNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLL 928
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT-----S 260
TGTP+QN L ELWAL++F +PS+F + + F F ++ ++ ++ E+ T
Sbjct: 929 TGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTG--EKVELNEEETILIIRR 986
Query: 261 LKGILSAFMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRK--------- 305
L +L F+LRR K+ E H LP E ++ LQ+ +Y + K
Sbjct: 987 LHKVLRPFLLRRLKK---EVEH-QLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSE 1042
Query: 306 -----------------ELPKLL-----------ALSSRTANHQSLQNT----ASGKLVV 333
+L KL T H + SGK +
Sbjct: 1043 KGKHGKGGAKALMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFEL 1102
Query: 334 LDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSV 393
LD +L KL + HRVLLF QMTQ + I++D+L R++ Y RLDG+ +AE+R +R F+
Sbjct: 1103 LDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFN- 1161
Query: 394 QSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRI 453
A G+D FVF++STRAGG+GLNL ADTV+ ++ DWNP D QA RAHRI
Sbjct: 1162 ----------AKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRI 1211
Query: 454 GQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDRE 497
GQ N V + L+T ++VEE I+ A KL + V+ + D++
Sbjct: 1212 GQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQK 1255
>sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1
PE=1 SV=1
Length = 1365
Score = 313 bits (802), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 194/489 (39%), Positives = 272/489 (55%), Gaps = 66/489 (13%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L+ +Q++GL+WLI + +V+L DEMGLGKT+Q I FL YL SQ GPFL + PLS
Sbjct: 205 LRDYQMDGLNWLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQHLYGPFLCVVPLS 264
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTTY 156
W E ++ P + V+ Y+G+ R IR+ + S+ L F+ +LTTY
Sbjct: 265 TMTAWQREFQQWAPDINVVTYIGDVSSRDIIRQFEW-------SFSSSKRLKFNAILTTY 317
Query: 157 DVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSE 216
+++L D+ FL W ++DEA RLKN S+LY L+E F RLL+TGTP+QN+L E
Sbjct: 318 EILLKDRQFLRSFSWACLLVDEAHRLKNDDSLLYKALKE-FDTNHRLLVTGTPLQNSLKE 376
Query: 217 LWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQK 276
LWAL+HF MP F + F +DA + L L F+LRR K+
Sbjct: 377 LWALLHFIMPYKFESWEDFEKDHEDAATKG-----------YEKLHKQLEPFILRRQKKD 425
Query: 277 LVECGHLMLPPL--TEITVLQKKVYASILRK---------------------ELPKLL-- 311
+ + + + E+T +QK+ Y IL K EL K
Sbjct: 426 VEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSALRKGVKGSINTFINIVIELKKCCNH 485
Query: 312 ALSSRTANHQSLQNTA-----------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDI 360
AL ++ + +S + A SGKL++LD LL +L +GHRVL+F+QM + LDI
Sbjct: 486 ALLTKPEDFESRASLATSDAVEKLLRGSGKLLLLDKLLCRLKETGHRVLIFSQMVRMLDI 545
Query: 361 LQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGG 420
L ++L+ R + ++RLDGSI+ E R A+ HF+ A G+ F F++STRAGG
Sbjct: 546 LAEYLQRRHFPFQRLDGSIKGELRKQALDHFN-----------AEGSQDFCFLLSTRAGG 594
Query: 421 VGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAER 480
+G+NL ADTVI ++ DWNPQ D QA RAHRIGQ N V LVT +VEE I+ RA+R
Sbjct: 595 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEDIVERAKR 654
Query: 481 KLRLSHNVV 489
K+ L H V+
Sbjct: 655 KMVLDHLVI 663
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 310 bits (793), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 189/505 (37%), Positives = 273/505 (54%), Gaps = 75/505 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
E++ Q+ G++W+ + N +L DEMGLGKT+Q + FLSYL S GPFL++ P
Sbjct: 388 GEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVP 447
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +A +TP L + Y G E R NIR YE +N L F++LLT
Sbjct: 448 LSTVPAWQETLANWTPDLNSICYTGNTESRANIRE--YEFYLS----TNSRKLKFNILLT 501
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ +L D+ L+ I W Y IDEA RLKN S LY L + F RLL+TGTP+QNNL
Sbjct: 502 TYEYILKDKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQ-FRTANRLLITGTPLQNNL 560
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL +L++F MP F ++ +A + I++ L+ L F+LRR K
Sbjct: 561 KELASLVNFLMPGKFYIRDEL------NFDQPNAEQERDIRD----LQERLQPFILRRLK 610
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALSS------------- 315
+ + + LP + E++ +Q + Y +IL K L +
Sbjct: 611 KDVEKS----LPSKSERILRVELSDMQTEWYKNILTKNYRALTGHTDGRGQLSLLNIVVE 666
Query: 316 --RTANHQSLQNTA----------------------SGKLVVLDLLLKKLYNSGHRVLLF 351
+ +NH L A SGK+V+LD LL++L + GHRVL+F
Sbjct: 667 LKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRVLIF 726
Query: 352 AQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFV 411
+QM + L+IL +++ LR Y+Y+RLDG+I A R +I HF+ + + FV
Sbjct: 727 SQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPD-----------FV 775
Query: 412 FMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVE 471
F++STRAGG+G+NL ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV +++ TVE
Sbjct: 776 FLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVE 835
Query: 472 EVIMRRAERKLRLSHNVVGDDVVDR 496
E I+ RA RK+ L + ++ V ++
Sbjct: 836 EDILERARRKMILEYAIISLGVTEK 860
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 308 bits (790), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 295/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L YL + GP +V+
Sbjct: 227 IKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVV 286
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W+ E+ +F P L ++++G E+R +IR + + P FDV
Sbjct: 287 APKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENL------------LQPGKFDVC 334
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R + RLL+TGTP+QN
Sbjct: 335 VTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMR-IYNTNYRLLITGTPLQN 393
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELW+L++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 394 NLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 446
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 447 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKRLLNIAMQL 502
Query: 317 --TANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L A +GK+V+LD LL KL + RVL+F+QMT+ LD
Sbjct: 503 RKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLD 562
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ E+R A+I F+ G++ FVF++STRAG
Sbjct: 563 ILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFN-----------KPGSEKFVFLLSTRAG 611
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD V+ Y+ DWNPQ D QA RAHRIGQ V TE+T+EE ++ RA
Sbjct: 612 GLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 671
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V DDL ++ FG + F K I +E+ D +
Sbjct: 672 KKLALDALVIQQG----RLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDIDRIIAK 727
Query: 536 GLNSMVE 542
G + E
Sbjct: 728 GEETTAE 734
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 191/522 (36%), Positives = 275/522 (52%), Gaps = 73/522 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+L P+Q+EGL+WL + G + +L DEMGLGKT+Q+++FL L GPFL+ P
Sbjct: 600 GKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAP 659
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVK-------EQSQMSNVSPL 147
LS W E ++ P V+ YVG R+ R +R + V+ + S+M +
Sbjct: 660 LSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENM 719
Query: 148 PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTG 207
F VLLT+Y+ + MD+ LS I W ++DEA RLKN S+ + L E + + R+L+TG
Sbjct: 720 KFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNE-YTIHYRVLLTG 778
Query: 208 TPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSA 267
TP+QNNL EL+ L++F F L F + F + ++Q L +L
Sbjct: 779 TPLQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISK----------EDQIEKLHNLLGP 828
Query: 268 FMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKL----------- 310
MLRR K ++ +P +E+ V +QKK Y +IL + L
Sbjct: 829 HMLRRLKADVL----TGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSL 884
Query: 311 ---LALSSRTANHQSL----------------QNTA----SGKLVVLDLLLKKLYNSGHR 347
L + NH L + TA SGK V+L +L+KL + GHR
Sbjct: 885 MNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHR 944
Query: 348 VLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGN 407
VL+F+QMT+ LDI++D E Y YER+DGSI + R Q AI+R A G
Sbjct: 945 VLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMR---------QDAIDRY--NAPGA 993
Query: 408 DAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTE 467
F+F++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHR+GQ + V+ VT+
Sbjct: 994 QQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTK 1053
Query: 468 HTVEEVIMRRAERKLRLSHNVVGDDVVDREVKERTAVETDDL 509
+VEE I A++K+ L+H VV + +E K + E DD+
Sbjct: 1054 KSVEEKITSVAKKKMLLNHLVVRAGLGGKEGKTMSKTELDDV 1095
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/500 (38%), Positives = 256/500 (51%), Gaps = 73/500 (14%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L P+Q+EGL+WL + G + +L DEMGLGKT+Q I FL L S GP+LV PLS
Sbjct: 700 LHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLS 759
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-------HVKEQSQMSNVSPLPF 149
W E + P V+ Y G++E R IR + K+ +M + F
Sbjct: 760 TIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKF 819
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
VLLT+Y+++ +DQ L I W ++DEA RLKN S + VL + + +LL+TGTP
Sbjct: 820 HVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNS-YKIDYKLLLTGTP 878
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL+ L++F P F L FL F D ++Q L +L M
Sbjct: 879 LQNNLEELFHLLNFLTPERFNNLEGFLEEFADISK----------EDQIKKLHDLLGPHM 928
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS-------- 315
LRR K + + +P TE+ V +QKK Y IL + L +
Sbjct: 929 LRRLKADVFK----NMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLN 984
Query: 316 ------RTANHQSLQNTA--------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ NH L A SGKL++L +LKKL + GHRVL
Sbjct: 985 IMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVL 1044
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QMT+ LD+L+DFLE Y YER+DG I R AI F+ A G
Sbjct: 1045 IFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFN-----------APGAQQ 1093
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ V+ VT +
Sbjct: 1094 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRAS 1153
Query: 470 VEEVIMRRAERKLRLSHNVV 489
VEE I + A+RK+ L+H VV
Sbjct: 1154 VEERITQVAKRKMMLTHLVV 1173
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 306 bits (784), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 181/507 (35%), Positives = 281/507 (55%), Gaps = 76/507 (14%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + G N +L DEMGLGKT+Q ++F+S+L F++ GP +++ P
Sbjct: 374 GELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVP 433
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR-TMYEHVKEQSQMSNVSPLPFDVLL 153
LS W+ K+ P L + Y+G ++ R IR Y + + + + + + F+VLL
Sbjct: 434 LSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKT----MKFNVLL 489
Query: 154 TTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
TTY+ +L D+ L I W + +DEA RLKN S LY L F + R+L+TGTP+QNN
Sbjct: 490 TTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNS-FKVANRMLITGTPLQNN 548
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRT 273
+ EL AL++F MP F T++Q + F++ +E L + F+LRR
Sbjct: 549 IKELAALVNFLMPGRF-TIDQEID-FENQDEEQ--------EEYIHDLHRRIQPFILRRL 598
Query: 274 KQKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS------------- 314
K+ + + LP T E++ +Q + Y +IL K L A +
Sbjct: 599 KKDVEKS----LPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNE 654
Query: 315 -SRTANHQSLQNTA-------------------------SGKLVVLDLLLKKLYNSGHRV 348
+ +NH L + A SGK+V+LD LL +L GHRV
Sbjct: 655 LKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRV 714
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F+QM + LDIL D+L ++ +++RLDG++ + +R +I HF+ + ND
Sbjct: 715 LIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDS----------ND 764
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
FVF++STRAGG+G+NL+ ADTV+ ++ DWNPQ D QA+ RAHRIGQ NHV+ LV++
Sbjct: 765 -FVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKD 823
Query: 469 TVEEVIMRRAERKLRLSHNVVGDDVVD 495
TVEE ++ RA +K+ L + ++ V D
Sbjct: 824 TVEEEVLERARKKMILEYAIISLGVTD 850
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 306 bits (783), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 188/503 (37%), Positives = 260/503 (51%), Gaps = 71/503 (14%)
Query: 32 GVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLV 91
G +L P+Q+EG++WL + G++ +L DEMGLGKT+Q ++FL L GPFLV
Sbjct: 725 GTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLV 784
Query: 92 LCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPL---- 147
PLS W E + P + Y+G+++ R IR + + S VS L
Sbjct: 785 AVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQ 844
Query: 148 -PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMT 206
F+VLLT+Y+++ MD L I W ++DEA RLK+ S + +L + + +LL+T
Sbjct: 845 YKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNS-YTIAYKLLLT 903
Query: 207 GTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILS 266
GTP+QNNL EL+ L++F F L F F D +EQ L +L
Sbjct: 904 GTPLQNNLEELFHLLNFLSRDKFNDLQAFQGEFADVSK----------EEQVKRLHEMLG 953
Query: 267 AFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSS----- 315
MLRR K +++ +P +E V +QKK Y IL K L + S
Sbjct: 954 PHMLRRLKTDVLK----NMPSKSEFIVRVELSAMQKKFYKFILTKNYEALNSKSGGGSCS 1009
Query: 316 ---------RTANHQSL--------------------QNTASGKLVVLDLLLKKLYNSGH 346
+ NH L A+GKLV+L +LK+L H
Sbjct: 1010 LINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKMLKQLKAQNH 1069
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QMT+ LDIL+DFLE +Y YER+DG I R AI F+ A G
Sbjct: 1070 RVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFN-----------APG 1118
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
FVF++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ N V+ VT
Sbjct: 1119 AQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVT 1178
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
++VEE + + A+RK+ L+H VV
Sbjct: 1179 RNSVEERVTQVAKRKMMLTHLVV 1201
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 305 bits (782), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 192/500 (38%), Positives = 264/500 (52%), Gaps = 79/500 (15%)
Query: 40 HQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTD 99
+Q+EGL+WL + G + +L DEMGLGKT+Q I FL L + GPFLV PLS
Sbjct: 739 YQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTII 798
Query: 100 GWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMY-------EHVKEQSQMSNVSPLPFDVL 152
W E + PK V+ Y G+++ R IR + + K+ +M + + F VL
Sbjct: 799 NWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVL 858
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LT+Y+++ +DQ L I W ++DEA RLKN S + VL + + +LL+TGTP+QN
Sbjct: 859 LTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVL-NGYKIDHKLLLTGTPLQN 917
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL EL+ L++F P F L FL F D ++Q L +L MLRR
Sbjct: 918 NLEELFHLLNFLTPERFNNLEGFLEEFADISK----------EDQIKKLHDLLGPHMLRR 967
Query: 273 TKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQ-SLQN 325
K + + +P TE+ V +QKK Y IL + AL+SR +Q SL N
Sbjct: 968 LKADVFK----NMPAKTELIVRVELSPMQKKYYKYILTR---NFEALNSRGGGNQVSLLN 1020
Query: 326 ------------------------------------TASGKLVVLDLLLKKLYNSGHRVL 349
+SGKL++L +L+KL GHRVL
Sbjct: 1021 IMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVL 1080
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QMT+ LD+L+DFL+ Y YER+DG I A+R Q AI+R A G
Sbjct: 1081 IFSQMTKMLDLLEDFLDYEGYKYERIDGGIT-----GALR----QEAIDRF--NAPGAQQ 1129
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
F F++STRAGG+G+NL ADTVI ++ DWNP D QA RAHRIGQ N V+ VT +
Sbjct: 1130 FCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRAS 1189
Query: 470 VEEVIMRRAERKLRLSHNVV 489
VEE I + A+RK+ L+H VV
Sbjct: 1190 VEERITQVAKRKMMLTHLVV 1209
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 305 bits (781), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 189/493 (38%), Positives = 277/493 (56%), Gaps = 74/493 (15%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+ GL+WL + G + +L DEMGLGKT+Q ISFL+YL GPFL++ PL
Sbjct: 476 ELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 535
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E+ + P++ + Y+G+ R IR + H + + L F++LLTT
Sbjct: 536 STLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKR-------LKFNILLTT 588
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL + W + +DEA RLKN S+LY L + F RLL+TGTP+QN+L
Sbjct: 589 YEILLKDKSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQNSLK 647
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFMLRRTK 274
ELW+L+HF MP F + F + GK +E + SL L F+LRR K
Sbjct: 648 ELWSLLHFIMPEKFSSWEDF------------EEEHGKGREYGYASLHKELEPFLLRRVK 695
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP E++ LQK+ Y IL + L S
Sbjct: 696 KDVEKS----LPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMEL 751
Query: 315 SRTANH----------------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH ++LQ+ +SGKL++LD LL +L G+RVL+F+QM +
Sbjct: 752 KKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVR 811
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL ++L+ R++ ++RLDGSI+ E R A+ HF+ A G++ F F++ST
Sbjct: 812 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFN-----------AEGSEDFCFLLST 860
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ +VEE I+
Sbjct: 861 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILE 920
Query: 477 RAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 921 RAKKKMVLDHLVI 933
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 184/499 (36%), Positives = 262/499 (52%), Gaps = 71/499 (14%)
Query: 27 DAAEFGV-TAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
D + F + E++ +QV GL+WL +N +L DEMGLGKTLQ IS + Y+K +
Sbjct: 121 DKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNK 180
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
P LV+ P S W +E K+ P + + +G+ R + R + +
Sbjct: 181 ASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDV------------IL 228
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
P FDV TTY+++L + L ++ W Y IIDEA R+KN S L +RE RLL+
Sbjct: 229 PQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRE-LNSENRLLI 287
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGIL 265
TGTP+QNNL ELWAL++F +P +F + + F S F + S + + L +L
Sbjct: 288 TGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNT-------DLVQRLHKVL 340
Query: 266 SAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKE------------- 306
F+LRR K + + L P E+ V +Q++ Y +L K+
Sbjct: 341 QPFLLRRIKSDVEKS----LLPKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKA 396
Query: 307 -LPKLLALSSRTANHQSLQNTA---------------SGKLVVLDLLLKKLYNSGHRVLL 350
L +L + NH L + A SGK+VVLD LL K G RVL+
Sbjct: 397 RLMNILMHLRKCVNHPYLFDGAEPGPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLI 456
Query: 351 FAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAF 410
F+Q ++ LD+L+DF R Y Y RLDGS E+R AI ++ A + F
Sbjct: 457 FSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYN-----------APDSKKF 505
Query: 411 VFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTV 470
+FM++TRAGG+G+NL AD VI Y+ DWNPQ D QA+ RAHRIGQ V L+TE+TV
Sbjct: 506 IFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTV 565
Query: 471 EEVIMRRAERKLRLSHNVV 489
+E I+ +AE KLRL + V+
Sbjct: 566 DERIIEKAEAKLRLDNIVI 584
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 199/549 (36%), Positives = 294/549 (53%), Gaps = 84/549 (15%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
EL+ Q+ G++W+ + N +L DEMGLGKT+Q ++FLSYL S GPFLV+ P
Sbjct: 373 GELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVP 432
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +A + + + Y+G R+ IR YE + +Q + F++LLT
Sbjct: 433 LSTVPAWQETLALWASDMNCISYLGNTTSRQVIRD--YEFYVDGTQ-----KIKFNLLLT 485
Query: 155 TYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNL 214
TY+ VL D+ LS I W Y IDEA RLKN S LY L + F RLL+TGTP+QNN+
Sbjct: 486 TYEYVLKDRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQ-FKNSNRLLITGTPLQNNI 544
Query: 215 SELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTK 274
EL AL+ F MP F + + AP + + SL+ L ++LRR K
Sbjct: 545 RELAALVDFLMPGKFEIREEI---------NLEAPDEEQ-EAYIRSLQEHLQPYILRRLK 594
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKE---------------LPKLLAL 313
+ + + LP + E++ LQ Y +IL + L ++
Sbjct: 595 KDVEKS----LPSKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSGSQISLLNIVVE 650
Query: 314 SSRTANHQSLQNTA------------------------SGKLVVLDLLLKKLYNSGHRVL 349
+ +NH L + SGK+V+LD LL +L GHRVL
Sbjct: 651 LKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRVL 710
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+QM + LDIL D+L LR Y ++RLDG++ A R +I HF+ A +
Sbjct: 711 IFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFN-----------APNSPD 759
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
FVF++STRAGG+G+NL+ ADTVI ++ DWNPQ D QA+ RAHRIGQ NHV+ L+++ T
Sbjct: 760 FVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDT 819
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDREVKERT-AVETDDLRSII-FGL-HLFDPKAINN 526
+EE ++ RA RK+ L + ++ V D++ + ++L +I+ FG ++F KA NN
Sbjct: 820 IEEDVLERARRKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNMF--KAENN 877
Query: 527 EES-DDLRL 534
++ +D+ L
Sbjct: 878 QKKLEDMNL 886
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/547 (36%), Positives = 295/547 (53%), Gaps = 76/547 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ +++ +Q+ GL+WLIR Y G+N +L DEMGLGKTLQ IS L+YL + GP +V+
Sbjct: 185 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVV 244
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
P S W++E+ +F P L ++++G E+RR+IR + K FD+
Sbjct: 245 APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGK------------FDIC 292
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
+T++++ + ++ L + W Y IIDEA R+KN +S+L +R F RLL+TGTP+QN
Sbjct: 293 VTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMR-LFSTNYRLLITGTPLQN 351
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRR 272
NL ELWAL++F +P +F + F F+ + + +E L +L F+LRR
Sbjct: 352 NLHELWALLNFLLPEIFSSAETFDEWFQISGENDQ-------QEVVQQLHKVLRPFLLRR 404
Query: 273 TKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSSR---------- 316
K VE G LPP E ++ +QK+ Y ++L+K+L + A R
Sbjct: 405 LKSD-VEKG---LPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQL 460
Query: 317 --TANHQSLQN---------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLD 359
NH L T +GK+V+LD LL KL RVL+F+QMT+ LD
Sbjct: 461 RKCCNHPYLFQGAEPGPPYTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 360 ILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAG 419
IL+D+L R Y Y R+DG+ +ER A+I ++ G++ FVF++STRAG
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYN-----------KPGSEKFVFLLSTRAG 569
Query: 420 GVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAE 479
G+G+NL AD VI Y+ DWNPQVD QA RAHRIGQ V TE +EE ++ RA
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAY 629
Query: 480 RKLRLSHNVVGDDVVDREVKERTAVETDDLRSII-FGLHL-FDPK--AINNEESDDLRLS 535
+KL L V+ + E+ V D+L ++ +G + F K I +E+ D +
Sbjct: 630 KKLALDALVIQQG----RLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAK 685
Query: 536 GLNSMVE 542
G + E
Sbjct: 686 GEEATAE 692
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 276/493 (55%), Gaps = 74/493 (15%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+ GL+WL + G + +L DEMGLGKT+Q ISFL+YL GPFL++ PL
Sbjct: 480 ELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 539
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E+ + ++ + Y+G+ R IR + H + + L F++LLTT
Sbjct: 540 STLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKR-------LKFNILLTT 592
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL + W + +DEA RLKN S+LY L + F RLL+TGTP+QN+L
Sbjct: 593 YEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQNSLK 651
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFMLRRTK 274
ELW+L+HF MP F + F + GK +E + SL L F+LRR K
Sbjct: 652 ELWSLLHFIMPEKFSSWEDF------------EEEHGKGREYGYASLHKELEPFLLRRVK 699
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP E++ LQK+ Y IL + L S
Sbjct: 700 KDVEKS----LPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMEL 755
Query: 315 SRTANH----------------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH ++LQ+ +SGKL++LD LL +L G+RVL+F+QM +
Sbjct: 756 KKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVR 815
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL ++L+ R++ ++RLDGSI+ E R A+ HF+ A G++ F F++ST
Sbjct: 816 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFN-----------AEGSEDFCFLLST 864
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ +VEE I+
Sbjct: 865 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILE 924
Query: 477 RAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 925 RAKKKMVLDHLVI 937
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 178/509 (34%), Positives = 272/509 (53%), Gaps = 87/509 (17%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL W++ + +N +L DEMGLGKT+Q IS L+YL + GP+LV+
Sbjct: 763 VGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVI 822
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W SE AK+ P L + + G +R+ ++ + + FDV+
Sbjct: 823 VPLSTLSNWSSEFAKWAPTLRTISFKGSPNERK-------------AKQAKIRAGEFDVV 869
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTT++ ++ ++ LS++ W + IIDE R+KN S L L H+ RL++TGTP+QN
Sbjct: 870 LTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQN 929
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT-----SLKGILSA 267
NL ELWAL++F +P +F ++ F F ++ + ++ E+ T L +L
Sbjct: 930 NLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRP 989
Query: 268 FMLRRTK-----------QKLVECGHLMLPPLTEITVLQKKVYASILR--------KELP 308
F+LRR K +K+V+C +++ LQ+ +Y +L+ +
Sbjct: 990 FLLRRLKKDVEKELPDKVEKVVKC---------KMSALQQIMYQQMLKYRRLFIGDQNNK 1040
Query: 309 KLLALSSRTANHQSLQ------------------NTA----------SGKLVVLDLLLKK 340
K++ L R N+Q +Q N +GK +LD +L K
Sbjct: 1041 KMVGL--RGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFELLDRILPK 1098
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
L +GHRVL+F QMTQ +DI++DFL Y RLDG +++ER +R F+
Sbjct: 1099 LKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFN-------- 1150
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
A ++ F++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ N V
Sbjct: 1151 ---APDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVR 1207
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVV 489
+ L+T ++VEEVI+ RA +KL + V+
Sbjct: 1208 ILRLITTNSVEEVILERAYKKLDIDGKVI 1236
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 302 bits (774), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 188/493 (38%), Positives = 276/493 (55%), Gaps = 74/493 (15%)
Query: 36 ELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPL 95
EL+ +Q+ GL+WL + G + +L DEMGLGKT+Q ISFL+YL GPFL++ PL
Sbjct: 478 ELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 537
Query: 96 SVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLTT 155
S W E+ + ++ + Y+G+ R IR + H + + L F++LLTT
Sbjct: 538 STLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKR-------LKFNILLTT 590
Query: 156 YDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLS 215
Y+++L D+ FL + W + +DEA RLKN S+LY L + F RLL+TGTP+QN+L
Sbjct: 591 YEILLKDKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLID-FKSNHRLLITGTPLQNSLK 649
Query: 216 ELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-FTSLKGILSAFMLRRTK 274
ELW+L+HF MP F + F + GK +E + SL L F+LRR K
Sbjct: 650 ELWSLLHFIMPEKFSSWEDF------------EEEHGKGREYGYASLHKELEPFLLRRVK 697
Query: 275 QKLVECGHLMLPPLT------EITVLQKKVYASILRKELPKLLALS-------------- 314
+ + + LP E++ LQK+ Y IL + L S
Sbjct: 698 KDVEKS----LPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMEL 753
Query: 315 SRTANH----------------QSLQN--TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQ 356
+ NH ++LQ+ +SGKL++LD LL +L G+RVL+F+QM +
Sbjct: 754 KKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVR 813
Query: 357 TLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMIST 416
LDIL ++L+ R++ ++RLDGSI+ E R A+ HF+ A G++ F F++ST
Sbjct: 814 MLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFN-----------AEGSEDFCFLLST 862
Query: 417 RAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMR 476
RAGG+G+NL +ADTV+ ++ DWNPQ D QA RAHRIGQ V LVT+ +VEE I+
Sbjct: 863 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILE 922
Query: 477 RAERKLRLSHNVV 489
RA++K+ L H V+
Sbjct: 923 RAKKKMVLDHLVI 935
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 302 bits (773), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 182/501 (36%), Positives = 265/501 (52%), Gaps = 70/501 (13%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q+ GL W++ Y +N +L DEMGLGKT+Q+IS ++YL + GPFLV+
Sbjct: 466 VGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVI 525
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P L + Y G QR +++ Q ++ N FDVL
Sbjct: 526 VPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQH--------QIRVGN-----FDVL 572
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS+ W + IIDE R+KN S L + ++ RL++TGTP+QN
Sbjct: 573 LTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQN 632
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELWAL++F +P +F + F F ++ ++ ++ E+ L +L
Sbjct: 633 NLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRP 692
Query: 268 FMLRRTK-----------QKLVEC----------------GHLMLPPLTE------ITVL 294
F+LRR K +K+++C L + TE I L
Sbjct: 693 FLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGL 752
Query: 295 QKKVYASILRK------ELPKLLALSSRTANHQSLQNTASGKLVVLDLLLKKLYNSGHRV 348
K+ LRK ++ + + + + L +GK +LD +L K SGHRV
Sbjct: 753 NNKIMQ--LRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRV 810
Query: 349 LLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGND 408
L+F QMTQ +DI++DFL ++ Y RLDGS + EER + F+ A +D
Sbjct: 811 LMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFN-----------APDSD 859
Query: 409 AFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEH 468
F F++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ N V + L+T
Sbjct: 860 YFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTD 919
Query: 469 TVEEVIMRRAERKLRLSHNVV 489
+VEEVI+ RA +KL + V+
Sbjct: 920 SVEEVILERAMQKLDIDGKVI 940
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 270/506 (53%), Gaps = 82/506 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V +LK +Q+ GL W+I Y +N +L DEMGLGKT+Q IS +++L + GPFLV+
Sbjct: 413 VGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVI 472
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E ++ P + + Y G + +R+ ++ V+ + F VL
Sbjct: 473 VPLSTLTNWTMEFERWAPSIVKIVYKGPPQ----VRKALHPQVRHSN---------FQVL 519
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ LS+I W Y IIDE R+KN S L N L ++ RL++TGTP+QN
Sbjct: 520 LTTYEYIIKDRPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQN 579
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTSLKGILSA 267
NL ELWAL++F +P +F ++ F F ++ + ++ E+ L +L
Sbjct: 580 NLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRP 639
Query: 268 FMLRRTK-----------QKLVECGHLMLPPLTEITVLQKKVYASILR------------ 304
F+LRR K +K++ C +++ LQ+K+Y + +
Sbjct: 640 FLLRRLKKDVEAELPDKVEKVIRC---------QMSGLQQKLYYQMKKHGMLYVEDAKRG 690
Query: 305 ----KELPKLLALSSRTANH--------QSLQNTA---------SGKLVVLDLLLKKLYN 343
K L + + NH +S+ T SGK +LD +L KL+
Sbjct: 691 KTGIKGLQNTVMQLKKICNHPFVFEDVERSIDPTGFNYDMLWRVSGKFELLDRILPKLFR 750
Query: 344 SGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSE 403
SGHR+L+F QMTQ ++I++D+L R++ Y RLDGS +A++R + F+ +A
Sbjct: 751 SGHRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTA------- 803
Query: 404 AGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSIN 463
+ +F++STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ V
Sbjct: 804 ----EVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYR 859
Query: 464 LVTEHTVEEVIMRRAERKLRLSHNVV 489
L+TE +VEE I+ RA+ KL + V+
Sbjct: 860 LITEKSVEENILARAQYKLDIDGKVI 885
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 286/548 (52%), Gaps = 92/548 (16%)
Query: 26 VDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMS 85
V+ + V LK +Q++GL W++ Y +N +L DEMGLGKT+Q I+F++YL +
Sbjct: 858 VEQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKNQ 917
Query: 86 PGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVS 145
GPFL++ PLS W+ E K+ P ++ + Y G + +R+T+ ++ +
Sbjct: 918 QGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQ----LRKTLQSQIRSSN------ 967
Query: 146 PLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLM 205
F+VLLTT++ ++ D+ LS+I W + IIDE R+KN S L + L ++ RL++
Sbjct: 968 ---FNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLIL 1024
Query: 206 TGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ-----FTS 260
TGTP+QNNL ELWAL++F +P +F ++ F F ++ + + E+
Sbjct: 1025 TGTPLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKR 1084
Query: 261 LKGILSAFMLRRTK-----------QKLVECGHLMLPPLTEITVLQKKVYASILRKELPK 309
L +L F+ RR K +K+++C PL+ LQ K+Y + + +
Sbjct: 1085 LHKVLRPFLFRRLKKDVEKELPDKVEKVIKC------PLSG---LQLKLYQQMKKHGMLF 1135
Query: 310 LLALSSRTANHQSLQNT---------------------------------ASGKLVVLDL 336
+ +T + LQNT A+GK +LD
Sbjct: 1136 VDGEKGKTG-IKGLQNTVMQLKKICNHPFIFEDVERAIDPSGTNVDLLWRAAGKFELLDR 1194
Query: 337 LLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSA 396
+L KL+ +GH+ L+F QMTQ + I++D+L + + Y RLDGS ++++R + + F+ +
Sbjct: 1195 ILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKS 1254
Query: 397 IERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQM 456
D ++FM+STRAGG+GLNL ADTVI ++ DWNP D QA RAHRIGQ
Sbjct: 1255 -----------DVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQT 1303
Query: 457 NHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVD-------REVKERTAVE--TD 507
V + L+TE ++EE I+ RA+ KL L V+ D RE R+ +E D
Sbjct: 1304 KEVRILRLITEKSIEENILSRAQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSLLEHDGD 1363
Query: 508 DLRSIIFG 515
D + +G
Sbjct: 1364 DDHDLTYG 1371
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 296 bits (758), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 186/507 (36%), Positives = 266/507 (52%), Gaps = 70/507 (13%)
Query: 25 PVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQM 84
PV E G+ +L P Q+EG+SWL + G+ +L DEMGLGKT+Q + FL L
Sbjct: 257 PVFLKEAGL--KLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGH 314
Query: 85 SPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRR--TMYEHVKEQSQMS 142
GPFL+ PLS W E+ + P+L + YVG + R IR+ +E V ++
Sbjct: 315 CRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRE 374
Query: 143 NVSPLPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRR 202
N + F+V+LT+Y+ + +D FL I W ++DEA RL++ S + +L + + + +
Sbjct: 375 NQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSK-YRIGYK 433
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
LL+TGTP+QNNL EL+ L++F F L F + F D +EQ L
Sbjct: 434 LLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTDVSK----------EEQVKRLH 483
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKL------ 310
IL MLRR K +++ +PP +E V +QKK Y IL K L
Sbjct: 484 EILEPHMLRRLKADVLKS----MPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQKGGG 539
Query: 311 --------LALSSRTANHQSL--------------------QNTASGKLVVLDLLLKKLY 342
+ + NH L ASGKL +L +LK+L
Sbjct: 540 RVCSLLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASGKLDLLSKMLKQLK 599
Query: 343 NSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYS 402
HRVLLF+QMT+ L++L+ FLE Y Y+R+DGSI+ + R Q AI+R
Sbjct: 600 ADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLR---------QKAIDRFND 650
Query: 403 EAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSI 462
++ FVF++STRAGG+G+NL ADTVI ++ DWNP D QA RAHR+GQ V+
Sbjct: 651 PV--SEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIY 708
Query: 463 NLVTEHTVEEVIMRRAERKLRLSHNVV 489
VT ++VEE IM+ A+ K+ L+H VV
Sbjct: 709 RFVTHNSVEERIMQVAKHKMMLTHLVV 735
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 296 bits (757), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 194/503 (38%), Positives = 260/503 (51%), Gaps = 79/503 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L P+Q+EGL+WL + G + +L DEMGLGKT+Q FL L S GPFLV PLS
Sbjct: 726 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 785
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV-------KEQSQMSNVSPLPF 149
W E + P + V+ YVG+++ R IR + K+ S+M + + F
Sbjct: 786 TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 845
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
VLLT+Y+++ +D L I W I+DEA RLKN S + VL + L +LL+TGTP
Sbjct: 846 HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQ-HKLLLTGTP 904
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL+ L++F P F L FL F D ++Q L +L M
Sbjct: 905 LQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK----------EDQIKKLHDMLGPHM 954
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQ-S 322
LRR K + + +P TE+ V +QKK Y IL + AL++R +Q S
Sbjct: 955 LRRLKADVFK----NMPSKTELIVRVELSPMQKKYYKYILTR---NFEALNARGGGNQVS 1007
Query: 323 LQNT------------------------------------ASGKLVVLDLLLKKLYNSGH 346
L N ASGKL++L +LK L GH
Sbjct: 1008 LLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGH 1067
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QMT+ LD+L+DFLE Y YER+DG I R AI F+ A G
Sbjct: 1068 RVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFN-----------APG 1116
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
F F++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ V+ VT
Sbjct: 1117 AQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVT 1176
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
+VEE I + A++K+ L+H VV
Sbjct: 1177 RASVEERITQVAKKKMMLTHLVV 1199
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 295 bits (756), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 194/503 (38%), Positives = 260/503 (51%), Gaps = 79/503 (15%)
Query: 37 LKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLS 96
L P+Q+EGL+WL + G + +L DEMGLGKT+Q FL L S GPFLV PLS
Sbjct: 719 LHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLS 778
Query: 97 VTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHV-------KEQSQMSNVSPLPF 149
W E + P + V+ YVG+++ R IR + K+ S+M + + F
Sbjct: 779 TIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKF 838
Query: 150 DVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTP 209
VLLT+Y+++ +D L I W I+DEA RLKN S + VL + L +LL+TGTP
Sbjct: 839 HVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQ-HKLLLTGTP 897
Query: 210 IQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
+QNNL EL+ L++F P F L FL F D ++Q L +L M
Sbjct: 898 LQNNLEELFHLLNFLTPERFHNLEGFLEEFADIAK----------EDQIKKLHDMLGPHM 947
Query: 270 LRRTKQKLVECGHLMLPPLTEITV------LQKKVYASILRKELPKLLALSSRTANHQ-S 322
LRR K + + +P TE+ V +QKK Y IL + AL++R +Q S
Sbjct: 948 LRRLKADVFK----NMPSKTELIVRVELSPMQKKYYKYILTR---NFEALNARGGGNQVS 1000
Query: 323 LQNT------------------------------------ASGKLVVLDLLLKKLYNSGH 346
L N ASGKL++L +LK L GH
Sbjct: 1001 LLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGH 1060
Query: 347 RVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGG 406
RVL+F+QMT+ LD+L+DFLE Y YER+DG I R AI F+ A G
Sbjct: 1061 RVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFN-----------APG 1109
Query: 407 NDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVT 466
F F++STRAGG+G+NL ADTVI Y+ DWNP D QA RAHRIGQ V+ VT
Sbjct: 1110 AQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVT 1169
Query: 467 EHTVEEVIMRRAERKLRLSHNVV 489
+VEE I + A++K+ L+H VV
Sbjct: 1170 RASVEERITQVAKKKMMLTHLVV 1192
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 293 bits (750), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 272/520 (52%), Gaps = 87/520 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ LK +Q++GL W++ Y +N +L DEMGLGKT+Q I+ ++YL + GP+L++
Sbjct: 725 INGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLII 784
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G RR++ + + F+VL
Sbjct: 785 VPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSL-------------VPQLRSGKFNVL 831
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ L++I W Y I+DE R+KN L VL H++ PRR+L+TGTP+QN
Sbjct: 832 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQN 891
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT-----SLKGILSA 267
L ELWAL++F +P++F + + F F + +R + E+ T L +L
Sbjct: 892 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG--ERVDLNEEETILIIRRLHKVLRP 949
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------ 315
F+LRR K K VE LP E ++ LQK +Y + K + LL S
Sbjct: 950 FLLRRLK-KEVES---QLPEKVEYVIKCDMSALQKILYRHMQAKGI--LLTDGSEKDKKG 1003
Query: 316 ---------------RTANH----QSLQNT-------------------ASGKLVVLDLL 337
+ NH Q ++ + ASGK +LD +
Sbjct: 1004 KGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRI 1063
Query: 338 LKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAI 397
L KL + HRVLLF QMT + I++D+ R + Y RLDG+ ++E+R A ++ F+
Sbjct: 1064 LPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFN----- 1118
Query: 398 ERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMN 457
G+ F+F++STRAGG+GLNL AADTV+ ++ DWNP D QA RAHRIGQ N
Sbjct: 1119 ------EPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQN 1172
Query: 458 HVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDRE 497
V + L T ++VEE I+ A+ KL + V+ + D++
Sbjct: 1173 EVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1212
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1
PE=1 SV=1
Length = 764
Score = 293 bits (749), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 186/542 (34%), Positives = 290/542 (53%), Gaps = 72/542 (13%)
Query: 35 AELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVLCP 94
+LK +Q++G+ WLI + G+N +L D+MGLGKT+Q I FLS+LK + + GP+LV+ P
Sbjct: 200 GQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGNGLD-GPYLVIAP 258
Query: 95 LSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVLLT 154
LS W +E+A+FTP + + Y G++ QR +RR +H+ + V P F +++T
Sbjct: 259 LSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRR---KHMPK-----TVGP-KFPIVIT 309
Query: 155 TYDVVLMD-QGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNN 213
+Y+V + D + L PW Y +IDE RLKN L L+ H M +LL+TGTP+QNN
Sbjct: 310 SYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELK-HLKMDNKLLLTGTPLQNN 368
Query: 214 LSELWALMHFCMPSVFGTLNQFLSTF----KDAVHSSSAPKRGKIKEQFTSLKGILSAFM 269
LSELW+L++F +P +F + ++F S F K+ ++ + + + + L GIL F+
Sbjct: 369 LSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPFI 428
Query: 270 LRRTKQKLVECGHLMLPPLTEI------TVLQKKVYASILRKELPKLLALSS-------- 315
LRR K + L LP EI T QKK ++ L L ++
Sbjct: 429 LRRMKCDV----ELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLEAHLGENAIRGQGWKG 484
Query: 316 ----------RTANHQSLQN----------------TASGKLVVLDLLLKKLYNSGHRVL 349
+ NH L GK +L+ LL +L+ + H+VL
Sbjct: 485 KLNNLVIQLRKNCNHPDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVL 544
Query: 350 LFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDA 409
+F+Q T+ LDI+ + + + R+DGS++ +ER I+ FS + +
Sbjct: 545 IFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKS-----------SC 593
Query: 410 FVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHT 469
+F++STRAGG+G+NL AADT I Y+ DWNPQ+D QA+ R HRIGQ V L T +
Sbjct: 594 SIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQS 653
Query: 470 VEEVIMRRAERKLRLSHNVVGDDVVDRE-VKERTAVETDDLRSIIFGLHLFDPKAINNEE 528
+E +++RA KL+L H V+G +E K T +E +D+ +++ + K I +
Sbjct: 654 IETRVLKRAYSKLKLEHVVIGQGQFHQERAKSSTPLEEEDILALLKEDETAEDKLIQTDI 713
Query: 529 SD 530
SD
Sbjct: 714 SD 715
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 293 bits (749), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 272/520 (52%), Gaps = 87/520 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
+ LK +Q++GL W++ Y +N +L DEMGLGKT+Q I+ ++YL + GP+L++
Sbjct: 720 INGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLII 779
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G RR++ + + F+VL
Sbjct: 780 VPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSL-------------VPQLRSGKFNVL 826
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ L++I W Y I+DE R+KN L VL H++ PRR+L+TGTP+QN
Sbjct: 827 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQN 886
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFT-----SLKGILSA 267
L ELWAL++F +P++F + + F F + +R + E+ T L +L
Sbjct: 887 KLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTG--ERVDLNEEETILIIRRLHKVLRP 944
Query: 268 FMLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------ 315
F+LRR K K VE LP E ++ LQK +Y + K + LL S
Sbjct: 945 FLLRRLK-KEVES---QLPEKVEYVIKCDMSALQKILYRHMQAKGI--LLTDGSEKDKKG 998
Query: 316 ---------------RTANH----QSLQNT-------------------ASGKLVVLDLL 337
+ NH Q ++ + ASGK +LD +
Sbjct: 999 KGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRI 1058
Query: 338 LKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAI 397
L KL + HRVLLF QMT + I++D+ R + Y RLDG+ ++E+R A ++ F+
Sbjct: 1059 LPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFN----- 1113
Query: 398 ERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMN 457
G+ F+F++STRAGG+GLNL AADTV+ ++ DWNP D QA RAHRIGQ N
Sbjct: 1114 ------EPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQN 1167
Query: 458 HVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDRE 497
V + L T ++VEE I+ A+ KL + V+ + D++
Sbjct: 1168 EVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1207
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 182/519 (35%), Positives = 271/519 (52%), Gaps = 85/519 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL WL+ Y +N +L DEMGLGKT+Q I+ ++YL + GPFL++
Sbjct: 750 VNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLII 809
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G RR + + F+VL
Sbjct: 810 VPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAF-------------VPQLRSGKFNVL 856
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ L++I W Y I+DE R+KN L VL H++ PRRLL+TGTP+QN
Sbjct: 857 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 916
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ----FTSLKGILSAF 268
L ELWAL++F +P++F + + F F +A + + K +E+ L +L F
Sbjct: 917 KLPELWALLNFLLPTIFKSCSTFEQWF-NAPFAMTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 269 MLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------- 315
+LRR K K VE LP E ++ LQ+ +Y + K + LL S
Sbjct: 976 LLRRLK-KEVEA---QLPEKVEYVIKCDMSALQRVLYRHMQAKGV--LLTDGSEKDKKGK 1029
Query: 316 --------------RTANH----QSLQNT-------------------ASGKLVVLDLLL 338
+ NH Q ++ + ASGK +LD +L
Sbjct: 1030 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1089
Query: 339 KKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIE 398
KL + H+VLLF QMT + I++D+ R + Y RLDG+ +AE+R ++ F+
Sbjct: 1090 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN------ 1143
Query: 399 RLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
G++ F+F++STRAGG+GLNL +ADTVI ++ DWNP D QA RAHRIGQ N
Sbjct: 1144 -----EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDRE 497
V + L T ++VEE I+ A+ KL + V+ + D++
Sbjct: 1199 VRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1237
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 182/519 (35%), Positives = 271/519 (52%), Gaps = 85/519 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL WL+ Y +N +L DEMGLGKT+Q I+ ++YL + GPFL++
Sbjct: 750 VNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLII 809
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G RR + + F+VL
Sbjct: 810 VPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAF-------------VPQLRSGKFNVL 856
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ L++I W Y I+DE R+KN L VL H++ PRRLL+TGTP+QN
Sbjct: 857 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 916
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ----FTSLKGILSAF 268
L ELWAL++F +P++F + + F F +A + + K +E+ L +L F
Sbjct: 917 KLPELWALLNFLLPTIFKSCSTFEQWF-NAPFAMTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 269 MLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------- 315
+LRR K K VE LP E ++ LQ+ +Y + K + LL S
Sbjct: 976 LLRRLK-KEVEA---QLPEKVEYVIKCDMSALQRVLYRHMQAKGV--LLTDGSEKDKKGK 1029
Query: 316 --------------RTANH----QSLQNT-------------------ASGKLVVLDLLL 338
+ NH Q ++ + ASGK +LD +L
Sbjct: 1030 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1089
Query: 339 KKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIE 398
KL + H+VLLF QMT + I++D+ R + Y RLDG+ +AE+R ++ F+
Sbjct: 1090 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN------ 1143
Query: 399 RLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
G++ F+F++STRAGG+GLNL +ADTVI ++ DWNP D QA RAHRIGQ N
Sbjct: 1144 -----EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDRE 497
V + L T ++VEE I+ A+ KL + V+ + D++
Sbjct: 1199 VRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1237
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 182/519 (35%), Positives = 271/519 (52%), Gaps = 85/519 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL WL+ Y +N +L DEMGLGKT+Q I+ ++YL + GPFL++
Sbjct: 750 VNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLII 809
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G RR + + F+VL
Sbjct: 810 VPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAF-------------VPQLRSGKFNVL 856
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ L++I W Y I+DE R+KN L VL H++ PRRLL+TGTP+QN
Sbjct: 857 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 916
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ----FTSLKGILSAF 268
L ELWAL++F +P++F + + F F +A + + K +E+ L +L F
Sbjct: 917 KLPELWALLNFLLPTIFKSCSTFEQWF-NAPFAMTGEKVDLNEEETILIIRRLHKVLRPF 975
Query: 269 MLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------- 315
+LRR K K VE LP E ++ LQ+ +Y + K + LL S
Sbjct: 976 LLRRLK-KEVEA---QLPEKVEYVIKCDMSALQRVLYRHMQAKGV--LLTDGSEKDKKGK 1029
Query: 316 --------------RTANH----QSLQNT-------------------ASGKLVVLDLLL 338
+ NH Q ++ + ASGK +LD +L
Sbjct: 1030 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1089
Query: 339 KKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIE 398
KL + H+VLLF QMT + I++D+ R + Y RLDG+ +AE+R ++ F+
Sbjct: 1090 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN------ 1143
Query: 399 RLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
G++ F+F++STRAGG+GLNL +ADTVI ++ DWNP D QA RAHRIGQ N
Sbjct: 1144 -----EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1198
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDRE 497
V + L T ++VEE I+ A+ KL + V+ + D++
Sbjct: 1199 VRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1237
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/519 (35%), Positives = 271/519 (52%), Gaps = 85/519 (16%)
Query: 33 VTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPFLVL 92
V LK +Q++GL WL+ Y +N +L DEMGLGKT+Q I+ ++YL + GPFL++
Sbjct: 742 VNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLII 801
Query: 93 CPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYEHVKEQSQMSNVSPLPFDVL 152
PLS W E K+ P + + Y G RR + + F+VL
Sbjct: 802 VPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAF-------------VPQLRSGKFNVL 848
Query: 153 LTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQN 212
LTTY+ ++ D+ L++I W Y I+DE R+KN L VL H++ PRRLL+TGTP+QN
Sbjct: 849 LTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQN 908
Query: 213 NLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQ----FTSLKGILSAF 268
L ELWAL++F +P++F + + F F +A + + K +E+ L +L F
Sbjct: 909 KLPELWALLNFLLPTIFKSCSTFEQWF-NAPFAMTGEKVDLNEEETILIIRRLHKVLRPF 967
Query: 269 MLRRTKQKLVECGHLMLPPLTE------ITVLQKKVYASILRKELPKLLALSS------- 315
+LRR K K VE LP E ++ LQ+ +Y + K + LL S
Sbjct: 968 LLRRLK-KEVEA---QLPEKVEYVIKCDMSALQRVLYRHMQAKGV--LLTDGSEKDKKGK 1021
Query: 316 --------------RTANH----QSLQNT-------------------ASGKLVVLDLLL 338
+ NH Q ++ + ASGK +LD +L
Sbjct: 1022 GGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRIL 1081
Query: 339 KKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIE 398
KL + H+VLLF QMT + I++D+ R + Y RLDG+ +AE+R ++ F+
Sbjct: 1082 PKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN------ 1135
Query: 399 RLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNH 458
G++ F+F++STRAGG+GLNL +ADTVI ++ DWNP D QA RAHRIGQ N
Sbjct: 1136 -----EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE 1190
Query: 459 VLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDVVDRE 497
V + L T ++VEE I+ A+ KL + V+ + D++
Sbjct: 1191 VRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1229
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 288 bits (736), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 189/565 (33%), Positives = 286/565 (50%), Gaps = 94/565 (16%)
Query: 6 RLQVAAKIIHDNDERDGQTPVDAAEFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMG 65
R + + + H + RD Q EF + L P+Q+EGL++L + +V+L DEMG
Sbjct: 243 RTRRSKDVDHKRNPRDFQQFDHTPEF-LKGLLHPYQLEGLNFLRFSWSKQTHVILADEMG 301
Query: 66 LGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRR 125
LGKT+Q+I+ L+ L + P LV+ PLS W E A + P++ V+ Y G + R
Sbjct: 302 LGKTIQSIALLASLFEENLIP--HLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARA 359
Query: 126 NIRRTMY--------EHVKEQSQMSNVSP---LPFDVLLTTYDVVLMDQGFLSQIPWCYT 174
IR + K+ Q+S+ S + FDVLLT+Y+++ +D L I W
Sbjct: 360 VIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECM 419
Query: 175 IIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQ 234
I+DE RLKN S L++ L + + R+L+TGTP+QNNL EL+ LMHF FG+L +
Sbjct: 420 IVDEGHRLKNKDSKLFSSLTQ-YSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEE 478
Query: 235 FLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPLTEITV- 293
F FKD +EQ + L +L+ +LRR K+ +++ +PP E+ +
Sbjct: 479 FQEEFKDINQ----------EEQISRLHKMLAPHLLRRVKKDVMK----DMPPKKELILR 524
Query: 294 -----LQKKVYASILRKELPKLLALSSRTANHQSLQNT---------------------- 326
LQK+ Y +I + L+ + SL N
Sbjct: 525 VDLSSLQKEYYKAIFTRNYQ---VLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIH 581
Query: 327 -----------ASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERL 375
+ GKL +LD ++ KL GHRVL++ Q LD+L+D+ +K+ YER+
Sbjct: 582 DANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERI 641
Query: 376 DGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYE 435
DG + ER I F+ +++ + F F++STRAGG+G+NL ADTVI Y+
Sbjct: 642 DGKVGGAERQIRIDRFNAKNS-----------NKFCFLLSTRAGGLGINLATADTVIIYD 690
Query: 436 QDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVG----- 490
DWNP D QA+ RAHR+GQ N V+ L+ T+EE +M+ ++K+ L H VVG
Sbjct: 691 SDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVVGKLKTQ 750
Query: 491 -------DDVVDREVKERTAVETDD 508
DD++ KE A E D+
Sbjct: 751 NINQEELDDIIRYGSKELFASEDDE 775
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 286 bits (731), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 961 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1017
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1018 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1074
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1075 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1129
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1130 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1179
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1180 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1235
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1236 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1295
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1296 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1355
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1356 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1404
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1405 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1463
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 286 bits (731), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 196/539 (36%), Positives = 276/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 951 EYKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1007
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1008 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1064
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1065 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1119
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF PS F + F+ F D K +EQ L+
Sbjct: 1120 VLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL----------KTEEQVQKLQ 1169
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE---------- 306
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1170 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQ 1225
Query: 307 --LPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1226 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLI 1285
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1286 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKP 1345
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1346 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1394
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1395 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1453
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 285 bits (729), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 297/561 (52%), Gaps = 88/561 (15%)
Query: 5 ERLQVAAKIIH-DNDERDGQTPVDAA-EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGD 62
E LQV +I H + D ++ + E+ + +L+ +Q+EG++WL+ + N +L D
Sbjct: 427 ESLQVLPEIKHVERPASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILAD 486
Query: 63 EMGLGKTLQAISFLSYLKFSQMSPGPFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGERE 122
EMGLGKT+Q+I+FLS + F + GPFL++ PLS W E +T ++ + Y G +
Sbjct: 487 EMGLGKTIQSITFLSEI-FLRGIHGPFLIIAPLSTITNWEREFRTWT-EMNAIVYHGSQI 544
Query: 123 QRRNIRRTMYEHVKEQSQMSNVSPL-PFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQR 181
R+ I++ YE V +Q + +S + F V++TT++++L D L +I W IIDEA R
Sbjct: 545 SRQMIQQ--YEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 182 LKNPSSVLYNVLREHFLMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKD 241
LKN + L L+ + ++L+TGTP+QN++ EL++L++F PS F + FL F D
Sbjct: 603 LKNRNCKLLEGLK-LMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD 661
Query: 242 AVHSSSAPKRGKIKEQFTSLKGILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQ 295
K +EQ L+ IL MLRR K + + L P E+T +Q
Sbjct: 662 L----------KTEEQVKKLQSILKPMMLRRLKDDVEK----NLAPKQETIIEVELTNIQ 707
Query: 296 KKVYASILRK------------ELPKLLALS---SRTANHQSLQN--------------- 325
KK Y +IL K +P L+ + NH L N
Sbjct: 708 KKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHS 767
Query: 326 ------------TASGKLVVLDLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYE 373
A+GKLV++D LL KL GH+VL+F+QM + LDIL+D+L R+Y+YE
Sbjct: 768 PDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYE 827
Query: 374 RLDGSIRAEERFAAIRHFSVQSAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIF 433
R+DG +R R AAI F + D FVF++ TRAGG+G+NL AADT I
Sbjct: 828 RIDGRVRGNLRQAAIDRFCKPDS-----------DRFVFLLCTRAGGLGINLTAADTCII 876
Query: 434 YEQDWNPQVDKQALQRAHRIGQMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVVGDDV 493
++ DWNPQ D QA R HRIGQ V L+T ++ E + +A KL L V+ D
Sbjct: 877 FDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQD-- 934
Query: 494 VDRE-----VKERTAVETDDL 509
++R+ V++ + +E +DL
Sbjct: 935 INRKGGTNGVQQLSKMEVEDL 955
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 285 bits (729), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 195/539 (36%), Positives = 275/539 (51%), Gaps = 95/539 (17%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLS--YLKFSQMSPG 87
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL YLK G
Sbjct: 962 EYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIH---G 1018
Query: 88 PFLVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSP 146
PFLV+ PLS W E +T +L V+ Y G + RR I+ +YE + K+
Sbjct: 1019 PFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQ--LYEMYFKDPQGRVIKGS 1075
Query: 147 LPFDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLR----EHFLMPRR 202
F ++TT++++L D L IPW +IDEA RLKN + L L+ EH +
Sbjct: 1076 YKFHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEH-----K 1130
Query: 203 LLMTGTPIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLK 262
+L+TGTP+QN + EL++L+HF P F + F+ F D K +EQ L+
Sbjct: 1131 VLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEFGDL----------KTEEQVQKLQ 1180
Query: 263 GILSAFMLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRK----------- 305
IL MLRR K+ + + L P E+T +QKK Y +IL K
Sbjct: 1181 AILKPMMLRRLKEDVEK----NLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQ 1236
Query: 306 -ELPKLLALS---SRTANHQSLQN---------------------------TASGKLVVL 334
+P LL + NH L N A+GKLV++
Sbjct: 1237 ANVPNLLNTMMELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLI 1296
Query: 335 DLLLKKLYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQ 394
D LL KL GHRVL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS
Sbjct: 1297 DKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRP 1356
Query: 395 SAIERLYSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIG 454
+ D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIG
Sbjct: 1357 DS-----------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIG 1405
Query: 455 QMNHVLSINLVTEHTVEEVIMRRAERKLRLSHNVV----GDDVVDREVKERTAVETDDL 509
Q V L+T ++ E + +A KL L V+ G + V++ + E +DL
Sbjct: 1406 QSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRENATNGVQQLSKKEIEDL 1464
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 284 bits (726), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/509 (36%), Positives = 268/509 (52%), Gaps = 79/509 (15%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL + ++ GPF
Sbjct: 806 EYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEV-YNVGIHGPF 864
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSPLP 148
LV+ PLS W E +T ++ + Y G R+ I++ YE + K+
Sbjct: 865 LVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQ--YEMYCKDSRGRLIPGAYK 921
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
FD L+TT++++L D L +I W IIDEA RLKN + L + L+ H + ++L+TGT
Sbjct: 922 FDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLK-HMDLEHKVLLTGT 980
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QN + EL++L+HF PS F + ++FL F D K +EQ L+ IL
Sbjct: 981 PLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDL----------KTEEQVQKLQAILKPM 1030
Query: 269 MLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE------------LPKL 310
MLRR K+ + + L P E+T +QKK Y +IL K +P L
Sbjct: 1031 MLRRLKEDVEK----NLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNL 1086
Query: 311 LALS---SRTANHQSLQNTA---------------------------SGKLVVLDLLLKK 340
L + NH L N A +GKLV++D LL K
Sbjct: 1087 LNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPK 1146
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
L GH+VL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS +
Sbjct: 1147 LKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS---- 1202
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIGQ V
Sbjct: 1203 -------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 1255
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVV 489
L+T ++ E + +A KL L V+
Sbjct: 1256 VYRLITRNSYEREMFDKASLKLGLDKAVL 1284
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 186/509 (36%), Positives = 268/509 (52%), Gaps = 79/509 (15%)
Query: 30 EFGVTAELKPHQVEGLSWLIRRYLLGVNVLLGDEMGLGKTLQAISFLSYLKFSQMSPGPF 89
E+ +L+ +Q+EG++WL+ + N +L DEMGLGKT+Q+I+FL + ++ GPF
Sbjct: 804 EYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEV-YNVGIHGPF 862
Query: 90 LVLCPLSVTDGWVSEMAKFTPKLEVLRYVGEREQRRNIRRTMYE-HVKEQSQMSNVSPLP 148
LV+ PLS W E +T ++ + Y G R+ I++ YE + K+
Sbjct: 863 LVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQ--YEMYCKDSRGRLIPGAYK 919
Query: 149 FDVLLTTYDVVLMDQGFLSQIPWCYTIIDEAQRLKNPSSVLYNVLREHFLMPRRLLMTGT 208
FD L+TT++++L D L +I W IIDEA RLKN + L + L+ H + ++L+TGT
Sbjct: 920 FDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLK-HMDLEHKVLLTGT 978
Query: 209 PIQNNLSELWALMHFCMPSVFGTLNQFLSTFKDAVHSSSAPKRGKIKEQFTSLKGILSAF 268
P+QN + EL++L+HF PS F + ++FL F D K +EQ L+ IL
Sbjct: 979 PLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDL----------KTEEQVQKLQAILKPM 1028
Query: 269 MLRRTKQKLVECGHLMLPPL------TEITVLQKKVYASILRKE------------LPKL 310
MLRR K+ + + L P E+T +QKK Y +IL K +P L
Sbjct: 1029 MLRRLKEDVEK----NLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNMPNL 1084
Query: 311 LALS---SRTANHQSLQNTA---------------------------SGKLVVLDLLLKK 340
L + NH L N A +GKLV++D LL K
Sbjct: 1085 LNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPK 1144
Query: 341 LYNSGHRVLLFAQMTQTLDILQDFLELRKYSYERLDGSIRAEERFAAIRHFSVQSAIERL 400
L GH+VL+F+QM + LDIL+D+L R+Y YER+DG +R R AAI FS +
Sbjct: 1145 LKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS---- 1200
Query: 401 YSEAGGNDAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQMNHVL 460
D FVF++ TRAGG+G+NL AADT I ++ DWNPQ D QA R HRIGQ V
Sbjct: 1201 -------DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 1253
Query: 461 SINLVTEHTVEEVIMRRAERKLRLSHNVV 489
L+T ++ E + +A KL L V+
Sbjct: 1254 VYRLITRNSYEREMFDKASLKLGLDKAVL 1282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 235,523,039
Number of Sequences: 539616
Number of extensions: 9565792
Number of successful extensions: 31812
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 30034
Number of HSP's gapped (non-prelim): 1144
length of query: 673
length of database: 191,569,459
effective HSP length: 124
effective length of query: 549
effective length of database: 124,657,075
effective search space: 68436734175
effective search space used: 68436734175
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)