BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005859
(673 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 154/290 (53%), Gaps = 16/290 (5%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLK 451
F+L E++ A+ FS N+LG+ F YKG L DG++VAVK + + + E +F ++
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVI 511
+++ H NL LRG C + E L+Y ++ NG++ L S+ L+W R +
Sbjct: 88 MISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 512 KGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA 570
G A+G++YLH P ++H ++ A +L+ + ++ D GL KL+
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 571 AMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK-------------CSITPFTRQAAE 617
+G++APEY +TG+ +EK+D++ +G+++ ++++G+ + + + +
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 618 SSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELS 667
K+E +D +L+G + E L Q+AL CT SP RP + V++ L
Sbjct: 266 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 152/290 (52%), Gaps = 16/290 (5%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLK 451
F+L E++ A+ F N+LG+ F YKG L DG +VAVK + + + E +F ++
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVI 511
+++ H NL LRG C + E L+Y ++ NG++ L S+ L+W R +
Sbjct: 80 MISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 512 KGIAKGISYLHGK-RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA 570
G A+G++YLH P ++H ++ A +L+ + ++ D GL KL+
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 571 AMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK-------------CSITPFTRQAAE 617
+G++APEY +TG+ +EK+D++ +G+++ ++++G+ + + + +
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 618 SSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELS 667
K+E +D +L+G + E L Q+AL CT SP RP + V++ L
Sbjct: 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 150/297 (50%), Gaps = 27/297 (9%)
Query: 387 LESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEF 446
ES+ L ++E AT F L+G F YKG+LRDG+ VA+K + + +S +G
Sbjct: 24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK---RRTPESSQGIE 80
Query: 447 LKGLKI--LTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL---DLEAGSEKV 501
+I L+ +H +L SL G C R E LIY ++ NGNL +HL DL S
Sbjct: 81 EFETEIETLSFCRHPHLVSLIGFC--DERNEMILIYKYMENGNLKRHLYGSDLPTMS--- 135
Query: 502 LEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD-D 560
+ W R+ + G A+G+ YLH + ++H ++ + +L+ + P ++D G+ K + D
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTR--AIIHRDVKSINILLDENFVPKITDFGISKKGTELD 193
Query: 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITP--------FT 612
+GY+ PEY GR TEKSD+Y+FG+++F++L + +I
Sbjct: 194 QTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA 253
Query: 613 RQAAESS---KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
A ES ++E +DPNL K G A+ C S RPS+ +V+ +L
Sbjct: 254 EWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/299 (32%), Positives = 154/299 (51%), Gaps = 31/299 (10%)
Query: 387 LESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEF 446
ES+ L ++E AT F L+G F YKG+LRDG+ VA+K + + +S +G
Sbjct: 24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK---RRTPESSQGIE 80
Query: 447 LKGLKI--LTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL---DLEAGSEKV 501
+I L+ +H +L SL G C R E LIY ++ NGNL +HL DL S
Sbjct: 81 EFETEIETLSFCRHPHLVSLIGFC--DERNEMILIYKYMENGNLKRHLYGSDLPTMS--- 135
Query: 502 LEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL---LA 558
+ W R+ + G A+G+ YLH + ++H ++ + +L+ + P ++D G+ K L
Sbjct: 136 MSWEQRLEICIGAARGLHYLHTR--AIIHRDVKSINILLDENFVPKITDFGISKKGTELG 193
Query: 559 DDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITP-------- 610
+ ++K + +GY+ PEY GR TEKSD+Y+FG+++F++L + +I
Sbjct: 194 QTHLXXVVKGT--LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251
Query: 611 FTRQAAESS---KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
A ES ++E +DPNL K G A+ C S RPS+ +V+ +L
Sbjct: 252 LAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 142/302 (47%), Gaps = 30/302 (9%)
Query: 392 FNLEEVERATQCFSE------ANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDE-- 443
F+ E++ T F E N +G+ F YKG + + +V K A ++E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 444 GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLE 503
+F + +K++ +HENL L G S G C L+Y ++PNG+LL L G+ L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFS-SDGDDLC-LVYVYMPNGSLLDRLSCLDGTPP-LS 131
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADD 560
W R + +G A GI++LH +H ++ + +L+ + +SD GL + A
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTR------- 613
++ S + + A Y+APE G T KSDIY+FG+++ +I++G ++
Sbjct: 190 VMXSRIVGTTA--YMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 614 ---QAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
E +ED+ID + S S + +A C HE + RP I+ V Q L +
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
Query: 671 GS 672
S
Sbjct: 306 AS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 30/302 (9%)
Query: 392 FNLEEVERATQCFSE------ANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDE-- 443
F+ E++ T F E N +G+ F YKG + + +V K A ++E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 444 GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLE 503
+F + +K++ +HENL L G S G C L+Y ++PNG+LL L G+ L
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFS-SDGDDLC-LVYVYMPNGSLLDRLSCLDGTPP-LS 125
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADD 560
W R + +G A GI++LH +H ++ + +L+ + +SD GL + A
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTR------- 613
++ + + A Y+APE G T KSDIY+FG+++ +I++G ++
Sbjct: 184 VMXXRIVGTTA--YMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 240
Query: 614 ---QAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
E +ED+ID + S S + +A C HE + RP I+ V Q L +
Sbjct: 241 KEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 299
Query: 671 GS 672
S
Sbjct: 300 AS 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 141/302 (46%), Gaps = 30/302 (9%)
Query: 392 FNLEEVERATQCFSE------ANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDE-- 443
F+ E++ T F E N +G+ F YKG + + +V K A ++E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 444 GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLE 503
+F + +K++ +HENL L G S G C L+Y ++PNG+LL L G+ L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFS-SDGDDLC-LVYVYMPNGSLLDRLSCLDGTPP-LS 131
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADD 560
W R + +G A GI++LH +H ++ + +L+ + +SD GL + A
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTR------- 613
++ + + A Y+APE G T KSDIY+FG+++ +I++G ++
Sbjct: 190 VMXXRIVGTTA--YMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 614 ---QAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
E +ED+ID + S S + +A C HE + RP I+ V Q L +
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305
Query: 671 GS 672
S
Sbjct: 306 AS 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 135/302 (44%), Gaps = 30/302 (9%)
Query: 392 FNLEEVERATQCFSE------ANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDE-- 443
F+ E++ T F E N G+ F YKG + + +V K A ++E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 444 GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLE 503
+F + +K+ +HENL L G S G C L+Y + PNG+LL L G+ L
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFS-SDGDDLC-LVYVYXPNGSLLDRLSCLDGTPP-LS 122
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADD 560
W R + +G A GI++LH +H ++ + +L+ + +SD GL + A
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTR------- 613
+ S + + A Y APE G T KSDIY+FG+++ +I++G ++
Sbjct: 181 VXXSRIVGTTA--YXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 237
Query: 614 ---QAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
E +ED+ID S S + +A C HE + RP I+ V Q L
Sbjct: 238 KEEIEDEEKTIEDYIDKKXNDADSTSVEAXYS-VASQCLHEKKNKRPDIKKVQQLLQEXT 296
Query: 671 GS 672
S
Sbjct: 297 AS 298
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%)
Query: 72 LQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPS 131
LQ G +G+IP + L L+L FN L+G IP + SLS+L DL L +N L G+IP
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 132 QIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXX 191
++ + L+ L L +N LTG IP+ L + L+ ++L N+LTG IP
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520
Query: 192 XXFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPALKRLNG 234
N+ G +P +L + L LD+ N F+G +P A+ + +G
Sbjct: 521 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG 563
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%)
Query: 90 SLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKL 149
S+ L + +N L+G IPKEI S+ L L L N++SG IP ++G++ L +L L NKL
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692
Query: 150 TGNIPTQLGSLRKLSVLALQYNQLTGAIP 178
G IP + +L L+ + L N L+G IP
Sbjct: 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 77/189 (40%), Gaps = 29/189 (15%)
Query: 70 ISLQGKGLSGEIPAAV-GGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGK 128
+SL +GEIP + G +LTGL L N G +P S S L L L+ NN SG+
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 129 IP-SQIGNMTNLQVLQLCYNKLTGNIPTQLGSL--------------------------- 160
+P + M L+VL L +N+ +G +P L +L
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 161 RKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNS 220
L L LQ N TG IP FN L G +P L ++ KL L + N
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453
Query: 221 FSGNVPPAL 229
G +P L
Sbjct: 454 LEGEIPQEL 462
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 42/240 (17%)
Query: 23 EVDILMHIKDSLDPENRLLTSWAPNADPCSSDSFDGVACDENGRVANISLQGKGL----- 77
E+ L+ KD L P+ LL W+ N +PC +FDGV C ++ +V +I L K L
Sbjct: 13 EIHQLISFKDVL-PDKNLLPDWSSNKNPC---TFDGVTCRDD-KVTSIDLSSKPLNVGFS 67
Query: 78 ------------------SGEIPAAVGGLK---SLTGLYLHFNALNGVIPKEIASLSELS 116
+ I +V G K SLT L L N+L+G + + SL S
Sbjct: 68 AVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPV-TTLTSLGSCS 126
Query: 117 DL-YLNVNNLSGKIPSQIG---NMTNLQVLQLCYNKLTG-NIPTQLGS--LRKLSVLALQ 169
L +LNV++ + P ++ + +L+VL L N ++G N+ + S +L LA+
Sbjct: 127 GLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAIS 186
Query: 170 YNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPAL 229
N+++G + NN +P L + L+ LDI N SG+ A+
Sbjct: 187 GNKISGDVDVSRCVNLEFLDVSS--NNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAI 243
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 87 GLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCY 146
G L L + N ++G + +++ L L ++ NN S IP +G+ + LQ L +
Sbjct: 176 GCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISG 232
Query: 147 NKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLA 206
NKL+G+ + + +L +L + NQ G IP N G +P L+
Sbjct: 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE--NKFTGEIPDFLS 290
Query: 207 NV-PKLEVLDIRNNSFSGNVPP 227
L LD+ N F G VPP
Sbjct: 291 GACDTLTGLDLSGNHFYGAVPP 312
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%)
Query: 72 LQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPS 131
LQ G +G+IP + L L+L FN L+G IP + SLS+L DL L +N L G+IP
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 132 QIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXX 191
++ + L+ L L +N LTG IP+ L + L+ ++L N+LTG IP
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 517
Query: 192 XXFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPALKRLNG 234
N+ G +P +L + L LD+ N F+G +P A+ + +G
Sbjct: 518 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG 560
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%)
Query: 90 SLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKL 149
S+ L + +N L+G IPKEI S+ L L L N++SG IP ++G++ L +L L NKL
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 689
Query: 150 TGNIPTQLGSLRKLSVLALQYNQLTGAIP 178
G IP + +L L+ + L N L+G IP
Sbjct: 690 DGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 77/189 (40%), Gaps = 29/189 (15%)
Query: 70 ISLQGKGLSGEIPAAV-GGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGK 128
+SL +GEIP + G +LTGL L N G +P S S L L L+ NN SG+
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 129 IP-SQIGNMTNLQVLQLCYNKLTGNIPTQLGSL--------------------------- 160
+P + M L+VL L +N+ +G +P L +L
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 390
Query: 161 RKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNS 220
L L LQ N TG IP FN L G +P L ++ KL L + N
Sbjct: 391 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 450
Query: 221 FSGNVPPAL 229
G +P L
Sbjct: 451 LEGEIPQEL 459
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 42/240 (17%)
Query: 23 EVDILMHIKDSLDPENRLLTSWAPNADPCSSDSFDGVACDENGRVANISLQGKGL----- 77
E+ L+ KD L P+ LL W+ N +PC +FDGV C ++ +V +I L K L
Sbjct: 10 EIHQLISFKDVL-PDKNLLPDWSSNKNPC---TFDGVTCRDD-KVTSIDLSSKPLNVGFS 64
Query: 78 ------------------SGEIPAAVGGLK---SLTGLYLHFNALNGVIPKEIASLSELS 116
+ I +V G K SLT L L N+L+G + + SL S
Sbjct: 65 AVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPV-TTLTSLGSCS 123
Query: 117 DL-YLNVNNLSGKIPSQIG---NMTNLQVLQLCYNKLTG-NIPTQLGS--LRKLSVLALQ 169
L +LNV++ + P ++ + +L+VL L N ++G N+ + S +L LA+
Sbjct: 124 GLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAIS 183
Query: 170 YNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPAL 229
N+++G + NN +P L + L+ LDI N SG+ A+
Sbjct: 184 GNKISGDVDVSRCVNLEFLDVSS--NNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAI 240
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 87 GLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCY 146
G L L + N ++G + +++ L L ++ NN S IP +G+ + LQ L +
Sbjct: 173 GCGELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISG 229
Query: 147 NKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLA 206
NKL+G+ + + +L +L + NQ G IP N G +P L+
Sbjct: 230 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE--NKFTGEIPDFLS 287
Query: 207 NV-PKLEVLDIRNNSFSGNVPP 227
L LD+ N F G VPP
Sbjct: 288 GACDTLTGLDLSGNHFYGAVPP 309
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 21/286 (7%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLK 451
N ++ E + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 265
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWATR 507
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT+
Sbjct: 266 VMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 323
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLK 567
IS + YL K +H NL+A L+ + ++D GL +L+ D +
Sbjct: 324 IS------SAMEYLEKK--NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 375
Query: 568 ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDP 627
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 376 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLEK 431
Query: 628 NLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 432 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 477
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 21/286 (7%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLK 451
N ++ E + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 268
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWATR 507
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT+
Sbjct: 269 VMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 326
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLK 567
IS + YL K +H NL+A L+ + ++D GL +L+ D +
Sbjct: 327 IS------SAMEYLEKK--NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378
Query: 568 ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDP 627
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLEK 434
Query: 628 NLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 435 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 21/286 (7%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLK 451
N ++ E + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAA 307
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWATR 507
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT+
Sbjct: 308 VMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 365
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLK 567
IS + YL K +H NL+A L+ + ++D GL +L+ D +
Sbjct: 366 IS------SAMEYLEKK--NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 417
Query: 568 ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDP 627
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 418 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLEK 473
Query: 628 NLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 474 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 519
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 410 LGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
LG F Y+G+ + S+ VAVK + + + + +E FLK ++ +KH NL L G+C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+ ++I +F+ GNLL +L E + +L AT+IS + YL K
Sbjct: 77 TREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS------SAMEYLEKK 128
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+H +L+A L+ + ++D GL +L+ D + A + + APE +
Sbjct: 129 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 585 FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQI 644
F+ KSD++AFG+++++I + S P + S+V + ++ + + + ++
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYP----GIDPSQVYELLEKDYRMERPEGCPEKVYEL 242
Query: 645 ALHCTHESPSHRPSIENVMQELSSIIGSS 673
C +PS RPS + Q ++ S
Sbjct: 243 MRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 131/269 (48%), Gaps = 18/269 (6%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDE-GEFLKGLKILTSLKHENLASLRGIC 468
+G SF ++ GS VAVK + + ++ EFL+ + I+ L+H N+ G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
++ +++ G+L + L ++G+ + L+ R+S+ +AKG++YLH + P +
Sbjct: 104 TQPP--NLSIVTEYLSRGSLYRLLH-KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEK 588
VH NL + +L+ ++Y + D GL +L A + S A+ ++APE EK
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK-SAAGTPEWMAPEVLRDEPSNEK 219
Query: 589 SDIYAFGMIVFQILSGKC---SITPFTRQAAESSKVEDFIDP-NLEGKFSVSEASNLGQI 644
SD+Y+FG+I++++ + + ++ P AA K + P NL + + I
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQ--------VAAI 271
Query: 645 ALHCTHESPSHRPSIENVMQELSSIIGSS 673
C P RPS +M L +I S+
Sbjct: 272 IEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 9 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 64
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 123 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 174
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 175 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 230
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 231 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 410 LGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
LG + Y+G+ + S+ VAVK + + + + +E FLK ++ +KH NL L G+C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+ ++I +F+ GNLL +L E + +L AT+IS + YL K
Sbjct: 77 TREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS------SAMEYLEKK 128
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+H +L+A L+ + ++D GL +L+ D + A + + APE +
Sbjct: 129 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 585 FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQI 644
F+ KSD++AFG+++++I + S P + S+V + ++ + + + ++
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYP----GIDPSQVYELLEKDYRMERPEGCPEKVYEL 242
Query: 645 ALHCTHESPSHRPSIENVMQELSSIIGSS 673
C +PS RPS + Q ++ S
Sbjct: 243 MRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 10 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 65
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 124 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHA 175
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 231
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 232 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 410 LGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
LG + Y+G+ + S+ VAVK + + + + +E FLK ++ +KH NL L G+C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 79
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+ ++I +F+ GNLL +L E + +L AT+IS + YL K
Sbjct: 80 TREP--PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS------SAMEYLEKK 131
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+H +L+A L+ + ++D GL +L+ D + A + + APE +
Sbjct: 132 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 189
Query: 585 FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQI 644
F+ KSD++AFG+++++I + S P + S+V + ++ + + + ++
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLEKDYRMERPEGCPEKVYEL 245
Query: 645 ALHCTHESPSHRPSIENVMQELSSIIGSS 673
C +PS RPS + Q ++ S
Sbjct: 246 MRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 410 LGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
LG + Y+G+ + S+ VAVK + + + + +E FLK ++ +KH NL L G+C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 76
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+ ++I +F+ GNLL +L E + +L AT+IS + YL K
Sbjct: 77 TREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS------SAMEYLEKK 128
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+H +L+A L+ + ++D GL +L+ D + A + + APE +
Sbjct: 129 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 585 FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQI 644
F+ KSD++AFG+++++I + S P + S+V + ++ + + + ++
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYP----GIDPSQVYELLEKDYRMERPEGCPEKVYEL 242
Query: 645 ALHCTHESPSHRPSIENVMQELSSIIGSS 673
C +PS RPS + Q ++ S
Sbjct: 243 MRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 10 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 65
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 124 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 231
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 232 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 5 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 60
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 119 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 226
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 410 LGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
LG + Y+G+ + S+ VAVK + + + + +E FLK ++ +KH NL L G+C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+ ++I +F+ GNLL +L E + +L AT+IS + YL K
Sbjct: 79 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS------SAMEYLEKK 130
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+H +L+A L+ + ++D GL +L+ D + A + + APE +
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 585 FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQI 644
F+ KSD++AFG+++++I + S P + S+V + ++ + + + ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLEKDYRMERPEGCPEKVYEL 244
Query: 645 ALHCTHESPSHRPSIENVMQELSSIIGSS 673
C +PS RPS + Q ++ S
Sbjct: 245 MRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 410 LGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
LG + Y+G+ + S+ VAVK + + + + +E FLK ++ +KH NL L G+C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 91
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+ ++I +F+ GNLL +L E + +L AT+IS + YL K
Sbjct: 92 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS------SAMEYLEKK 143
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+H +L+A L+ + ++D GL +L+ D + A + + APE +
Sbjct: 144 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 585 FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQI 644
F+ KSD++AFG+++++I + S P + S+V + ++ + + + ++
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLEKDYRMERPEGCPEKVYEL 257
Query: 645 ALHCTHESPSHRPSIENVMQELSSIIGSS 673
C +PS RPS + Q ++ S
Sbjct: 258 MRACWQWNPSDRPSFAEIHQAFETMFQES 286
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 5 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 60
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 119 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 226
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 10 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 65
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 123
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 124 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 231
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 232 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 5 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 60
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 119 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 226
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 7 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 62
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 121 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 172
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 228
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 229 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 131/269 (48%), Gaps = 18/269 (6%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDE-GEFLKGLKILTSLKHENLASLRGIC 468
+G SF ++ GS VAVK + + ++ EFL+ + I+ L+H N+ G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
++ +++ G+L + L ++G+ + L+ R+S+ +AKG++YLH + P +
Sbjct: 104 TQPP--NLSIVTEYLSRGSLYRLLH-KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEK 588
VH +L + +L+ ++Y + D GL +L A + S A+ ++APE EK
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSK-XAAGTPEWMAPEVLRDEPSNEK 219
Query: 589 SDIYAFGMIVFQILSGKC---SITPFTRQAAESSKVEDFIDP-NLEGKFSVSEASNLGQI 644
SD+Y+FG+I++++ + + ++ P AA K + P NL + + I
Sbjct: 220 SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQ--------VAAI 271
Query: 645 ALHCTHESPSHRPSIENVMQELSSIIGSS 673
C P RPS +M L +I S+
Sbjct: 272 IEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 410 LGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
LG + Y+G+ + S+ VAVK + + + + +E FLK ++ +KH NL L G+C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 78
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+ ++I +F+ GNLL +L E + +L AT+IS + YL K
Sbjct: 79 TREP--PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS------SAMEYLEKK 130
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+H +L+A L+ + ++D GL +L+ D + A + + APE +
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 585 FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQI 644
F+ KSD++AFG+++++I + S P + S+V + ++ + + + ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLEKDYRMERPEGCPEKVYEL 244
Query: 645 ALHCTHESPSHRPSIENVMQELSSIIGSS 673
C +PS RPS + Q ++ S
Sbjct: 245 MRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 7 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 62
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 121 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 172
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 228
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 229 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 410 LGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
LG + Y+G+ + S+ VAVK + + + + +E FLK ++ +KH NL L G+C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 79
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+ ++I +F+ GNLL +L E + +L AT+IS + YL K
Sbjct: 80 TREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS------SAMEYLEKK 131
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+H +L+A L+ + ++D GL +L+ D + A + + APE +
Sbjct: 132 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 585 FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQI 644
F+ KSD++AFG+++++I + S P + S+V + ++ + + + ++
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLEKDYRMERPEGCPEKVYEL 245
Query: 645 ALHCTHESPSHRPSIENVMQELSSIIGSS 673
C +PS RPS + Q ++ S
Sbjct: 246 MRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 136/284 (47%), Gaps = 23/284 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 10 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 65
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 124 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 231
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ + + ++ C +PS RPS + Q ++
Sbjct: 232 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 136/284 (47%), Gaps = 23/284 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 10 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 65
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 66 AVMKEIKHPNLVQLLGVCTREP--PFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 124 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 175
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 176 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 231
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ + + ++ C +PS RPS + Q ++
Sbjct: 232 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 23/287 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 7 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 62
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 121 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPA 172
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 173 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 228
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + + ++ C +PS RPS + Q ++ S
Sbjct: 229 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F G R VA+K I + S DE F++ K++ +L HE L L G+C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVC- 88
Query: 470 SKGRGECFLIYDFVPNG---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
+K R F+I +++ NG N L+ + ++++LE + K + + + YL K+
Sbjct: 89 TKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLESKQ- 140
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFT 586
+H +L+A L++ + +SD GL + + DD S + + + + PE +F+
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 587 EKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
KSDI+AFG+++++I S GK FT +S+ + I L + + I
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEHIAQGLRLYRPHLASEKVYTIM 254
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C HE RP+ + ++ + ++
Sbjct: 255 YSCWHEKADERPTFKILLSNILDVM 279
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 136/284 (47%), Gaps = 23/284 (8%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGL 450
++ E+ER + + LG + Y+G+ + S+ VAVK + + + + +E FLK
Sbjct: 5 YDKWEMERTD--ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEA 60
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEAGSEKVLEWAT 506
++ +KH NL L G+C + ++I +F+ GNLL +L E + +L AT
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+IS + YL K +H +L+A L+ + ++D GL +L+ D +
Sbjct: 119 QIS------SAMEYLEKK--NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 170
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
A + + APE +F+ KSD++AFG+++++I + S P + S+V + ++
Sbjct: 171 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP----GIDLSQVYELLE 226
Query: 627 PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ + + ++ C +PS RPS + Q ++
Sbjct: 227 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 125/265 (47%), Gaps = 13/265 (4%)
Query: 410 LGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
LG + Y G+ + S+ VAVK + + + + +E FLK ++ +KH NL L G+C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNLVQLLGVC 97
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ +++ +++P GNLL +L E E+V + + I+ + YL K
Sbjct: 98 TLEP--PFYIVTEYMPYGNLLDYLR-ECNREEVTA-VVLLYMATQISSAMEYLEKK--NF 151
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEK 588
+H +L+A L+ + ++D GL +L+ D + A + + APE F+ K
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 589 SDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHC 648
SD++AFG+++++I + S P + S+V D ++ + + ++ C
Sbjct: 212 SDVWAFGVLLWEIATYGMSPYP----GIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRAC 267
Query: 649 THESPSHRPSIENVMQELSSIIGSS 673
SP+ RPS Q ++ S
Sbjct: 268 WKWSPADRPSFAETHQAFETMFHDS 292
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F G R VA+K I + S DE F++ K++ +L HE L L G+C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVC- 88
Query: 470 SKGRGECFLIYDFVPNG---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
+K R F+I +++ NG N L+ + ++++LE + K + + + YL K+
Sbjct: 89 TKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLESKQ- 140
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFT 586
+H +L+A L++ + +SD GL + + DD S + + + + PE +F+
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 587 EKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
KSDI+AFG+++++I S GK FT +S+ + I L + + I
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEHIAQGLRLYRPHLASEKVYTIM 254
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C HE RP+ + ++ + ++
Sbjct: 255 YSCWHEKADERPTFKILLSNILDVM 279
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F G R VA+K I + S DE F++ K++ +L HE L L G+C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVC- 79
Query: 470 SKGRGECFLIYDFVPNG---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
+K R F+I +++ NG N L+ + ++++LE + K + + + YL K+
Sbjct: 80 TKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLESKQ- 131
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFT 586
+H +L+A L++ + +SD GL + + DD S + + + + PE +F+
Sbjct: 132 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 587 EKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
KSDI+AFG+++++I S GK FT +S+ + I L + + I
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEHIAQGLRLYRPHLASEKVYTIM 245
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C HE RP+ + ++ + ++
Sbjct: 246 YSCWHEKADERPTFKILLSNILDVM 270
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F G R VA+K I + S DE F++ K++ +L HE L L G+C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVC- 73
Query: 470 SKGRGECFLIYDFVPNG---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
+K R F+I +++ NG N L+ + ++++LE + K + + + YL K+
Sbjct: 74 TKQRP-IFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLESKQ- 125
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFT 586
+H +L+A L++ + +SD GL + + DD S + + + + PE +F+
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 587 EKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
KSDI+AFG+++++I S GK FT +S+ + I L + + I
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEHIAQGLRLYRPHLASEKVYTIM 239
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C HE RP+ + ++ + ++
Sbjct: 240 YSCWHEKADERPTFKILLSNILDVM 264
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 17/264 (6%)
Query: 410 LGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
+G+ +F + G LR D ++VAVK +T + +FL+ +IL H N+ L G+C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
K +++ + V G+ L L E +V T + ++ A G+ YL K
Sbjct: 182 TQK--QPIYIVMELVQGGDFLTFLRTEGARLRV---KTLLQMVGDAAAGMEYLESK--CC 234
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDI-VFSMLKASAAMGYLAPEYTTTGRFTE 587
+H +L+A L+ + +SD G+ + AD + S + + APE GR++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 588 KSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE--ASNLGQIA 645
+SD+++FG+++++ S S P + + +F++ G+ E + ++
Sbjct: 295 ESDVWSFGILLWETFSLGASPYP----NLSNQQTREFVEKG--GRLPCPELCPDAVFRLM 348
Query: 646 LHCTHESPSHRPSIENVMQELSSI 669
C P RPS + QEL SI
Sbjct: 349 EQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 17/264 (6%)
Query: 410 LGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
+G+ +F + G LR D ++VAVK +T + +FL+ +IL H N+ L G+C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
K +++ + V G+ L L E +V T + ++ A G+ YL K
Sbjct: 182 TQK--QPIYIVMELVQGGDFLTFLRTEGARLRV---KTLLQMVGDAAAGMEYLESK--CC 234
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDI-VFSMLKASAAMGYLAPEYTTTGRFTE 587
+H +L+A L+ + +SD G+ + AD + S + + APE GR++
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 588 KSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE--ASNLGQIA 645
+SD+++FG+++++ S S P + + +F++ G+ E + ++
Sbjct: 295 ESDVWSFGILLWETFSLGASPYP----NLSNQQTREFVEKG--GRLPCPELCPDAVFRLM 348
Query: 646 LHCTHESPSHRPSIENVMQELSSI 669
C P RPS + QEL SI
Sbjct: 349 EQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F G R VA+K I + S DE F++ K++ +L HE L L G+C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVC- 72
Query: 470 SKGRGECFLIYDFVPNG---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
+K R F+I +++ NG N L+ + ++++LE + K + + + YL K+
Sbjct: 73 TKQRP-IFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLESKQ- 124
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFT 586
+H +L+A L++ + +SD GL + + DD S + + + + PE +F+
Sbjct: 125 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 587 EKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
KSDI+AFG+++++I S GK FT +S+ + I L + + I
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEHIAQGLRLYRPHLASEKVYTIM 238
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C HE RP+ + ++ + ++
Sbjct: 239 YSCWHEKADERPTFKILLSNILDVM 263
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F G R VA+K I + S DE F++ K++ +L HE L L G+C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVC- 68
Query: 470 SKGRGECFLIYDFVPNG---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
+K R F+I +++ NG N L+ + ++++LE + K + + + YL K+
Sbjct: 69 TKQRP-IFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLESKQ- 120
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFT 586
+H +L+A L++ + +SD GL + + DD S + + + + PE +F+
Sbjct: 121 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 587 EKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
KSDI+AFG+++++I S GK FT +S+ + I L + + I
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEHIAQGLRLYRPHLASEKVYTIM 234
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C HE RP+ + ++ + ++
Sbjct: 235 YSCWHEKADERPTFKILLSNILDVM 259
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 127/265 (47%), Gaps = 21/265 (7%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F G R VA+K I + S DE F++ K++ +L HE L L G+C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE--FIEEAKVMMNLSHEKLVQLYGVC- 73
Query: 470 SKGRGECFLIYDFVPNG---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
+K R F+I +++ NG N L+ + ++++LE + K + + + YL K+
Sbjct: 74 TKQR-PIFIITEYMANGCLLNYLREMRHRFQTQQLLE------MCKDVCEAMEYLESKQ- 125
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFT 586
+H +L+A L++ + +SD GL + + DD S + + + PE +F+
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 587 EKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
KSDI+AFG+++++I S GK FT +S+ + I L + + I
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFT-----NSETAEHIAQGLRLYRPHLASEKVYTIM 239
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C HE RP+ + ++ + ++
Sbjct: 240 YSCWHEKADERPTFKILLSNILDVM 264
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 99/180 (55%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 40 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 98
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H NL+ +L+
Sbjct: 99 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRNLATRNILVENENR 153
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D + +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 99/180 (55%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 39 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 97
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 98 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 152
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D F +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 42 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 100
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+A +E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 101 GSLRDY--LQAHAERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 155
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 99/180 (55%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +F+P
Sbjct: 42 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPY 100
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L ++ L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 101 GSLREY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 155
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 129/276 (46%), Gaps = 20/276 (7%)
Query: 403 CFSEANLLGKSSFSATYKGILRDGS-----VVAVKCIAKTSCKSDEGEFLKGLKILTSLK 457
C + ++G F YKG+L+ S VA+K + + +FL I+
Sbjct: 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 458 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKG 517
H N+ L G+ SK + +I +++ NG L + L + G VL+ + +++GIA G
Sbjct: 105 HHNIIRLEGVI-SKYK-PMMIITEYMENGALDKFLREKDGEFSVLQ---LVGMLRGIAAG 159
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD--IVFSMLKASAAMGYL 575
+ YL VH +L+A +L++ +SD GL ++L DD ++ + +
Sbjct: 160 MKYLANM--NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 217
Query: 576 APEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634
APE + +FT SD+++FG++++++++ G+ + + + F P
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPT-----P 272
Query: 635 VSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ S + Q+ + C + + RP +++ L +I
Sbjct: 273 MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 129/264 (48%), Gaps = 15/264 (5%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
+G F + G + VA+K I + S D+ F++ +++ L H L L G+C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD--FIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ L+++F+ +G L +L + G + T + + + +G++YL + ++
Sbjct: 93 EQA--PICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYL--EEACVI 145
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A L+ +SD G+ + + DD S + + +PE + R++ KS
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHC 648
D+++FG++++++ S GK P+ + + S VED I ++++ QI HC
Sbjct: 206 DVWSFGVLMWEVFSEGK---IPYENR-SNSEVVED-ISTGFRLYKPRLASTHVYQIMNHC 260
Query: 649 THESPSHRPSIENVMQELSSIIGS 672
E P RP+ ++++L+ I S
Sbjct: 261 WKERPEDRPAFSRLLRQLAEIAES 284
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 130/264 (49%), Gaps = 15/264 (5%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
+G F + G + VA+K I + + E +F++ +++ L H L L G+C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ L+++F+ +G L +L + G + T + + + +G++YL + ++
Sbjct: 73 EQA--PICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYL--EEASVI 125
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A L+ +SD G+ + + DD S + + +PE + R++ KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHC 648
D+++FG++++++ S GK P+ + + S VED I ++++ QI HC
Sbjct: 186 DVWSFGVLMWEVFSEGK---IPYENR-SNSEVVED-ISTGFRLYKPRLASTHVYQIMNHC 240
Query: 649 THESPSHRPSIENVMQELSSIIGS 672
E P RP+ ++++L++I S
Sbjct: 241 WKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 70 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 128
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 129 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 183
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 42 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 100
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 101 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 155
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 44 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 102
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 103 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 157
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 46 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 104
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 105 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 159
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 43 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 101
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 102 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 156
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 37 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 95
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 96 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 150
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 39 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 97
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 98 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 152
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 38 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 96
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 97 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 151
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 45 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 103
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 104 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 158
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 39 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 97
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 98 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 152
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 57 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 115
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 116 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 170
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 129/264 (48%), Gaps = 15/264 (5%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
+G F + G + VA+K I + + E +F++ +++ L H L L G+C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ L+++F+ +G L +L + G + T + + + +G++YL + ++
Sbjct: 76 EQA--PICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYL--EEACVI 128
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A L+ +SD G+ + + DD S + + +PE + R++ KS
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHC 648
D+++FG++++++ S GK P+ + + S VED I ++++ QI HC
Sbjct: 189 DVWSFGVLMWEVFSEGK---IPYENR-SNSEVVED-ISTGFRLYKPRLASTHVYQIMNHC 243
Query: 649 THESPSHRPSIENVMQELSSIIGS 672
E P RP+ ++++L+ I S
Sbjct: 244 WRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 8/180 (4%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VVAVK + + S + +F + ++IL SL+H+N+ +G+C S GR LI +++P
Sbjct: 57 GEVVAVKKL-QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY 115
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L + L+ E++ + + I KG+ YL KR +H +L+ +L+
Sbjct: 116 GSLRDY--LQKHKERI-DHIKLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENR 170
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K+L D +K + + + APE T +F+ SD+++FG++++++ +
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 12/206 (5%)
Query: 27 LMHIKDSL-DPENRLLTSWAPNADPCSSDSFDGVACD---ENGRVANISLQGKGLSGE-- 80
L+ IK L +P L+SW P D C + ++ GV CD + RV N+ L G L
Sbjct: 11 LLQIKKDLGNPTT--LSSWLPTTD-CCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYP 67
Query: 81 IPAAVGGLKSLTGLYLH-FNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNL 139
IP+++ L L LY+ N L G IP IA L++L LY+ N+SG IP + + L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 140 QVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIP-AXXXXXXXXXXXXXXFNNLF 198
L YN L+G +P + SL L + N+++GAIP + N L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 199 GPVPVKLANVPKLEVLDIRNNSFSGN 224
G +P AN+ L +D+ N G+
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGD 212
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 85 VGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144
VG K+L GL L N + G +P+ + L L L ++ NNL G+IP Q GN+ V
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAY 298
Query: 145 CYNK 148
NK
Sbjct: 299 ANNK 302
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 194 FNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPPALKRL 232
NNL GP+P +A + +L L I + + SG +P L ++
Sbjct: 86 INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 129/264 (48%), Gaps = 15/264 (5%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
+G F + G + VA+K I + + E +F++ +++ L H L L G+C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ L+++F+ +G L +L + G + T + + + +G++YL + ++
Sbjct: 71 EQA--PICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYL--EEACVI 123
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A L+ +SD G+ + + DD S + + +PE + R++ KS
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHC 648
D+++FG++++++ S GK P+ + + S VED I ++++ QI HC
Sbjct: 184 DVWSFGVLMWEVFSEGK---IPYENR-SNSEVVED-ISTGFRLYKPRLASTHVYQIMNHC 238
Query: 649 THESPSHRPSIENVMQELSSIIGS 672
E P RP+ ++++L+ I S
Sbjct: 239 WKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 129/264 (48%), Gaps = 15/264 (5%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
+G F + G + VA+K I + + E +F++ +++ L H L L G+C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ L+++F+ +G L +L + G + T + + + +G++YL + ++
Sbjct: 73 EQA--PICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYL--EEACVI 125
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A L+ +SD G+ + + DD S + + +PE + R++ KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHC 648
D+++FG++++++ S GK P+ + + S VED I ++++ QI HC
Sbjct: 186 DVWSFGVLMWEVFSEGK---IPYENR-SNSEVVED-ISTGFRLYKPRLASTHVYQIMNHC 240
Query: 649 THESPSHRPSIENVMQELSSIIGS 672
E P RP+ ++++L+ I S
Sbjct: 241 WKERPEDRPAFSRLLRQLAEIAES 264
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 21/277 (7%)
Query: 403 CFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
C ++G F G L+ VA+K + + +FL I+ H
Sbjct: 34 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 93
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGI 518
N+ L G+ +I +F+ NG+L L G V++ + +++GIA G+
Sbjct: 94 PNVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQNDGQFTVIQ---LVGMLRGIAAGM 148
Query: 519 SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDI----VFSMLKASAAMGY 574
YL VH +L+A +L++ +SD GL + L DD S L + +
Sbjct: 149 KYLADM--NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 206
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKF 633
APE +FT SD++++G+++++++S G+ T Q ++ +D+ P
Sbjct: 207 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP----- 261
Query: 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ S L Q+ L C + +HRP ++ L +I
Sbjct: 262 PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 298
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 121/263 (46%), Gaps = 22/263 (8%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F G + VAVK I + S DE F + + + L H L G+C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE--FFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ NG LL +L K LE + + + + +G+++L + +
Sbjct: 74 KEY--PIYIVTEYISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLESHQ--FI 126
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A L+ R +SD G+ + + DD S + + + APE +++ KS
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAA--ESSKVEDFIDPNLEGKFSVSEASNLGQIAL 646
D++AFG++++++ S GK +T + S+ P+L + + QI
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHL-------ASDTIYQIMY 239
Query: 647 HCTHESPSHRPSIENVMQELSSI 669
C HE P RP+ + Q LSSI
Sbjct: 240 SCWHELPEKRPTFQ---QLLSSI 259
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 138/304 (45%), Gaps = 32/304 (10%)
Query: 376 GQSGNGFSQEVLESFMFNLEEV----ERATQCFSEANLLGKSSFSATYKGILRDGSVVAV 431
G++G F++E+ E+ ++E++ + C+ + G+ VA+
Sbjct: 36 GRAGRSFTREI-EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVP------------VAI 82
Query: 432 KCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQH 491
K + + +FL I+ H N+ L G+ ++GR ++ +++ NG+L
Sbjct: 83 KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-TRGR-LAMIVTEYMENGSLDTF 140
Query: 492 LDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDS 551
L G +++ + +++G+ G+ YL G VH +L+A VL+ +SD
Sbjct: 141 LRTHDGQFTIMQL---VGMLRGVGAGMRYLSDL--GYVHRDLAARNVLVDSNLVCKVSDF 195
Query: 552 GLHKLLAD--DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSI 608
GL ++L D D ++ + + APE F+ SD+++FG++++++L+ G+
Sbjct: 196 GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
Query: 609 TPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSS 668
T + SS E + P G L Q+ L C H+ + RP ++ L +
Sbjct: 256 WNMTNRDVISSVEEGYRLPAPMGC-----PHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
Query: 669 IIGS 672
+I S
Sbjct: 311 LIRS 314
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 410 LGKSSFSATYKG-ILRDGSVVAVKCI------AKTSCKSDEGEFLKGLKILTSLKHENLA 462
+GK F +KG +++D SVVA+K + +T EF + + I+++L H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH 522
L G+ + R ++ +FVP G+L L +A ++W+ ++ ++ IA GI Y+
Sbjct: 87 KLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYMQ 139
Query: 523 GKRPGLVHPNLSAEKVLIHR--RYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAP 577
+ P +VH +L + + + P+ ++D G L+ V S+ ++AP
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG----LSQQSVHSVSGLLGNFQWMAP 195
Query: 578 EYTTTGR--FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI-DPNLEGKFS 634
E +TEK+D Y+F MI++ IL+G+ PF + K + I + L
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGE---GPFDEYSYGKIKFINMIREEGLRPTIP 252
Query: 635 VSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669
L + C P RP +++ELS +
Sbjct: 253 EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
+LG +F YKGI + +G V A+K + +T+ EF+ I+ S+ H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEA---GSEKVLEWATRISVIKGIA 515
+L L G+C S L+ +P+G LL+++ GS+ +L W + IA
Sbjct: 100 PHLVRLLGVCLSP---TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IA 150
Query: 516 KGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMGY 574
KG+ YL +R LVH +L+A VL+ + ++D GL +LL D+ ++ + +
Sbjct: 151 KGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 208
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+A E +FT +SD++++G+ ++++++
Sbjct: 209 MALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 20/209 (9%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
+LG +F YKGI + +G V A+K + +T+ EF+ I+ S+ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEA---GSEKVLEWATRISVIKGIA 515
+L L G+C S L+ +P+G LL+++ GS+ +L W + IA
Sbjct: 77 PHLVRLLGVCLSPT---IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IA 127
Query: 516 KGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMGY 574
KG+ YL +R LVH +L+A VL+ + ++D GL +LL D+ ++ + +
Sbjct: 128 KGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 185
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+A E +FT +SD++++G+ ++++++
Sbjct: 186 MALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 128/264 (48%), Gaps = 15/264 (5%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
+G F + G + VA+K I + + E +F++ +++ L H L L G+C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ L+ +F+ +G L +L + G + T + + + +G++YL + ++
Sbjct: 74 EQA--PICLVTEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYL--EEACVI 126
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A L+ +SD G+ + + DD S + + +PE + R++ KS
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHC 648
D+++FG++++++ S GK P+ + + S VED I ++++ QI HC
Sbjct: 187 DVWSFGVLMWEVFSEGK---IPYENR-SNSEVVED-ISTGFRLYKPRLASTHVYQIMNHC 241
Query: 649 THESPSHRPSIENVMQELSSIIGS 672
E P RP+ ++++L+ I S
Sbjct: 242 WRERPEDRPAFSRLLRQLAEIAES 265
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 129/278 (46%), Gaps = 35/278 (12%)
Query: 410 LGKSSFSATYKG-ILRDGSVVAVKCI------AKTSCKSDEGEFLKGLKILTSLKHENLA 462
+GK F +KG +++D SVVA+K + +T EF + + I+++L H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH 522
L G+ + R ++ +FVP G+L L +A ++W+ ++ ++ IA GI Y+
Sbjct: 87 KLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYMQ 139
Query: 523 GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA--------MGY 574
+ P +VH +L + + + L ++ + +AD FS+ + S +
Sbjct: 140 NQNPPIVHRDLRSPNIFLQS----LDENAPVCAKVAD---FSLSQQSVHSVSGLLGNFQW 192
Query: 575 LAPEYTTTGR--FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI-DPNLEG 631
+APE +TEK+D Y+F MI++ IL+G+ PF + K + I + L
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGE---GPFDEYSYGKIKFINMIREEGLRP 249
Query: 632 KFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669
L + C P RP +++ELS +
Sbjct: 250 TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 333 EE---PIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 385
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 446 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 501
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 502 RKEPEERPTFEYLQAFLEDYFTST 525
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ YL K
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYLASK 152
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA---MGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D +S+ + A + ++A E
Sbjct: 153 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 265
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 297
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 29/275 (10%)
Query: 410 LGKSSFSATYKG-ILRDGSVVAVKCI------AKTSCKSDEGEFLKGLKILTSLKHENLA 462
+GK F +KG +++D SVVA+K + +T EF + + I+++L H N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH 522
L G+ + R ++ +FVP G+L L +A ++W+ ++ ++ IA GI Y+
Sbjct: 87 KLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYMQ 139
Query: 523 GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD-----DIVFSMLKASAAMGYLAP 577
+ P +VH +L + + + L ++ + +AD V S+ ++AP
Sbjct: 140 NQNPPIVHRDLRSPNIFLQS----LDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAP 195
Query: 578 EYTTTGR--FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI-DPNLEGKFS 634
E +TEK+D Y+F MI++ IL+G+ PF + K + I + L
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGE---GPFDEYSYGKIKFINMIREEGLRPTIP 252
Query: 635 VSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669
L + C P RP +++ELS +
Sbjct: 253 EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 120/277 (43%), Gaps = 21/277 (7%)
Query: 403 CFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
C ++G F G L+ VA+K + + +FL I+ H
Sbjct: 8 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 67
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGI 518
N+ L G+ +I +F+ NG+L L G V++ + +++GIA G+
Sbjct: 68 PNVIHLEGVVTKST--PVMIITEFMENGSLDSFLRQNDGQFTVIQ---LVGMLRGIAAGM 122
Query: 519 SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDI----VFSMLKASAAMGY 574
YL VH L+A +L++ +SD GL + L DD S L + +
Sbjct: 123 KYLADM--NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 180
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKF 633
APE +FT SD++++G+++++++S G+ T Q ++ +D+ P
Sbjct: 181 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP----- 235
Query: 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ S L Q+ L C + +HRP ++ L +I
Sbjct: 236 PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 84 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 136
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 197 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 252
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 253 RKDPEERPTFEYLQAFLEDYFTST 276
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ YL K
Sbjct: 89 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYLASK 144
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA---MGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D +S+ + A + ++A E
Sbjct: 145 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 203 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 257
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 258 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 289
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ YL K
Sbjct: 115 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYLASK 170
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA---MGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D +S+ + A + ++A E
Sbjct: 171 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 229 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 283
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 284 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 315
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ YL K
Sbjct: 116 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYLASK 171
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA---MGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D +S+ + A + ++A E
Sbjct: 172 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 230 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 284
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 285 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 316
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ YL K
Sbjct: 96 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYLASK 151
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA---MGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D +S+ + A + ++A E
Sbjct: 152 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 264
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 265 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 296
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 84 EE---PIYIVIEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 136
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 197 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 252
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 253 RKDPEERPTFEYLQAFLEDYFTST 276
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 77 EE---PIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 129
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 190 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 245
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 246 RKEPEERPTFEYLQAFLEDYFTST 269
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ YL K
Sbjct: 92 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYLASK 147
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA---MGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D +S+ + A + ++A E
Sbjct: 148 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 260
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 261 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 84 EE---PIYIVIEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 136
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 197 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 252
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 253 RKDPEERPTFEYLQAFLEDYFTST 276
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ YL K
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYLASK 152
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA---MGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D +S+ + A + ++A E
Sbjct: 153 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 265
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 297
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 250 EE---PIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 302
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 363 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 418
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 419 RKEPEERPTFEYLQAFLEDYFTST 442
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ YL K
Sbjct: 94 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYLASK 149
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA---MGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D +S+ + A + ++A E
Sbjct: 150 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 262
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 263 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 294
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 75 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 127
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 188 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 243
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 244 RKDPEERPTFEYLQAFLEDYFTST 267
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 125/275 (45%), Gaps = 19/275 (6%)
Query: 403 CFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
C ++G F G L+ VA+K + + +FL I+ H
Sbjct: 44 CIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDH 103
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGI 518
N+ L G+ ++G+ ++ +F+ NG L L G V++ + +++GIA G+
Sbjct: 104 PNVVHLEGVV-TRGK-PVMIVIEFMENGALDAFLRKHDGQFTVIQ---LVGMLRGIAAGM 158
Query: 519 SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD--IVFSMLKASAAMGYLA 576
YL G VH +L+A +L++ +SD GL +++ DD V++ + + A
Sbjct: 159 RYLADM--GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTA 216
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSV 635
PE +FT SD++++G+++++++S G+ + Q + E + P +
Sbjct: 217 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPA-----PM 271
Query: 636 SEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ L Q+ L C + + RP E ++ L +I
Sbjct: 272 DCPAGLHQLMLDCWQKERAERPKFEQIVGILDKMI 306
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 250 EE---PIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 302
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 363 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 418
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 419 RKEPEERPTFEYLQAFLEDYFTST 442
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 127/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ YL K
Sbjct: 95 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYLASK 150
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA---MGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D +S+ + A + ++A E
Sbjct: 151 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 263
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 264 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 295
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 137/304 (45%), Gaps = 32/304 (10%)
Query: 376 GQSGNGFSQEVLESFMFNLEEV----ERATQCFSEANLLGKSSFSATYKGILRDGSVVAV 431
G++G F++E+ E+ ++E++ + C+ + G+ VA+
Sbjct: 36 GRAGRSFTREI-EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVP------------VAI 82
Query: 432 KCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQH 491
K + + +FL I+ H N+ L G+ ++GR ++ +++ NG+L
Sbjct: 83 KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-TRGR-LAMIVTEYMENGSLDTF 140
Query: 492 LDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDS 551
L G +++ + +++G+ G+ YL G VH +L+A VL+ +SD
Sbjct: 141 LRTHDGQFTIMQL---VGMLRGVGAGMRYLSDL--GYVHRDLAARNVLVDSNLVCKVSDF 195
Query: 552 GLHKLLAD--DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSI 608
GL ++L D D + + + APE F+ SD+++FG++++++L+ G+
Sbjct: 196 GLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
Query: 609 TPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSS 668
T + SS E + P G L Q+ L C H+ + RP ++ L +
Sbjct: 256 WNMTNRDVISSVEEGYRLPAPMGC-----PHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
Query: 669 IIGS 672
+I S
Sbjct: 311 LIRS 314
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 84 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 136
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 197 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 252
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 253 RKDPEERPTFEYLQAFLEDYFTST 276
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 73 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 125
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 186 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 241
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 242 RKDPEERPTFEYLQAFLEDYFTST 265
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 84 EE---PIYIVCEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 136
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 197 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 252
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 253 RKDPEERPTFEYLQAFLEDYFTST 276
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 250 EE---PIYIVGEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 302
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 363 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 418
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 419 RKEPEERPTFEYLQAFLEDYFTST 442
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 81 EE---PIYIVTEYMNKGSLLDFLKGETG--KYLRLPQLVDMSAQIASGMAYV--ERMNYV 133
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 194 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 249
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 250 RKEPEERPTFEYLQAFLEDYFTST 273
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 81 EE---PIYIVTEYMNKGSLLDFLKGETG--KYLRLPQLVDMSAQIASGMAYV--ERMNYV 133
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 194 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 249
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 250 RKEPEERPTFEYLQAFLEDYFTST 273
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 251 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 303
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 364 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 419
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 420 RKDPEERPTFEYLQAFLEDYFTST 443
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G LL L E G K L + + IA G++Y+ +R V
Sbjct: 84 EE---PIYIVMEYMSKGCLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 136
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 197 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 252
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 253 RKDPEERPTFEYLQAFLEDYFTST 276
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ ++HE L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 84 EE---PIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 136
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 197 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 252
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 253 RKDPEERPTFEYLQAFLEDYFTST 276
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G LL L E G K L + + IA G++Y+ +R V
Sbjct: 84 EE---PIYIVTEYMSKGCLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 136
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 197 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 252
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 253 RKDPEERPTFEYLQAFLEDYFTST 276
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ YL K
Sbjct: 96 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYLASK 151
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA---MGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D S+ + A + ++A E
Sbjct: 152 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 210 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 264
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 265 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 296
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ +L K
Sbjct: 156 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFLASK 211
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD---DIVFSMLKASAAMGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D D V + A + ++A E
Sbjct: 212 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 324
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 325 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ +L K
Sbjct: 98 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFLASK 153
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD---DIVFSMLKASAAMGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D D V + A + ++A E
Sbjct: 154 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 266
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 267 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 298
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 13/264 (4%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG+ F + G + VA+K + K S E FL+ +++ L+HE L L +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTL-KPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ ++ +++ G+LL L E G K L + + IA G++Y+ +R V
Sbjct: 74 EE---PIXIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYV--ERMNYV 126
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++ + P + +V D ++ +L + C
Sbjct: 187 DVWSFGILLTELTTKGRVPYP----GMVNREVLDQVERGYRMPCPPECPESLHDLMCQCW 242
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
+ P RP+ E + L S+
Sbjct: 243 RKEPEERPTFEYLQAFLEDYFTST 266
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ +L K
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFLASK 152
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD---DIVFSMLKASAAMGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D D V + A + ++A E
Sbjct: 153 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 265
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 297
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ +L K
Sbjct: 98 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFLASK 153
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD---DIVFSMLKASAAMGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D D V + A + ++A E
Sbjct: 154 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 266
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 267 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 298
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ +L K
Sbjct: 102 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFLASK 157
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD---DIVFSMLKASAAMGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D D V + A + ++A E
Sbjct: 158 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 270
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 271 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 302
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 5 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 60
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 61 LQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 114
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H NL A +L+ + ++D GL +L+ D+ + A
Sbjct: 115 ---AEGMAFIEER--NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 169
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 170 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 220
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 221 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 267
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ +L K
Sbjct: 95 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFLASK 150
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD---DIVFSMLKASAAMGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D D V + A + ++A E
Sbjct: 151 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 263
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 264 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 295
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCK-SDEGE---FLKGLKILTSLKHENLASL 464
++G+ F Y G L D + C K+ + +D GE FL I+ H N+ SL
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
GIC + G ++ ++ +G+L + E + V + I +AKG+ +L K
Sbjct: 97 LGICL-RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKFLASK 152
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD---DIVFSMLKASAAMGYLAPEYTT 581
+ VH +L+A ++ ++ ++D GL + + D D V + A + ++A E
Sbjct: 153 K--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 582 TGRFTEKSDIYAFGMIVFQILS---------GKCSITPFTRQAAESSKVEDFIDPNLEGK 632
T +FT KSD+++FG++++++++ IT + Q + E DP
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP----- 265
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
L ++ L C H RPS ++ +S+I +
Sbjct: 266 --------LYEVMLKCWHPKAEMRPSFSELVSRISAIFST 297
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 117/251 (46%), Gaps = 13/251 (5%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F + G + VA+K + K S E FL+ +I+ LKH+ L L +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTL-KPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +++ +++ G+LL L + G + L+ + + +A G++Y+ +R +
Sbjct: 75 EE---PIYIVTEYMNKGSLLDFL--KDGEGRALKLPNLVDMAAQVAAGMAYI--ERMNYI 127
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L + +L+ ++D GL +L+ D+ + A + + APE GRFT KS
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCT 649
D+++FG+++ ++++ P +VE +S L ++ +HC
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPIS----LHELMIHCW 243
Query: 650 HESPSHRPSIE 660
+ P RP+ E
Sbjct: 244 KKDPEERPTFE 254
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 18 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 73
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 74 LQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 127
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 128 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 182
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 183 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 233
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 234 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 280
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 15 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 70
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 71 LQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 124
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 125 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 230
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 231 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 17 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 72
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 73 LQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 126
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 127 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 182 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 232
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 233 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 279
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 11 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 66
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 67 LQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 120
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 121 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 176 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 226
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 227 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 64
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 65 LQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 118
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 119 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 224
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 225 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 19 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 74
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 75 LQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 128
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 129 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 183
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 184 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 234
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 235 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 281
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 10 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 65
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 66 LQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 119
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 120 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 175 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 225
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 226 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 272
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 15 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 70
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 71 LQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 124
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 125 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 179
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 230
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 231 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 277
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGS----VVAVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
+ +LG +F YKGI + DG VA+K + + + E L ++ +
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDL---EAGSEKVLEWATRISVIKGIA 515
++ L GIC + L+ +P G LL H+ GS+ +L W +I A
Sbjct: 79 PYVSRLLGICLT---STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------A 129
Query: 516 KGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMGY 574
KG+SYL R LVH +L+A VL+ + ++D GL +LL D+ + + +
Sbjct: 130 KGMSYLEDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW 187
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+A E RFT +SD++++G+ V+++++
Sbjct: 188 MALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 14 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 69
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 70 LQHQRLVRLYAVVTQEP---IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 123
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 124 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 178
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 179 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 229
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 230 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 276
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 64
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 65 LQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 118
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 119 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 224
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 225 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 129/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 9 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 64
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 65 LQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 118
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 119 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 173
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 224
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 225 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 124/280 (44%), Gaps = 19/280 (6%)
Query: 398 ERATQCFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKIL 453
E C + ++G F G L+ VA+K + + +FL I+
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM 77
Query: 454 TSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKG 513
H N+ L G+ ++ +++ NG+L L G V++ + +++G
Sbjct: 78 GQFDHPNIIHLEGVVTKSK--PVMIVTEYMENGSLDTFLKKNDGQFTVIQ---LVGMLRG 132
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD--IVFSMLKASAA 571
I+ G+ YL G VH +L+A +LI+ +SD GL ++L DD ++
Sbjct: 133 ISAGMKYLSDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE +FT SD++++G+++++++S G+ T Q + E + P+
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPS-- 248
Query: 631 GKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ + L Q+ L C + + RP + ++ L +I
Sbjct: 249 ---PMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 125/274 (45%), Gaps = 33/274 (12%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG F + G + VAVK + + S D FL ++
Sbjct: 4 EVPRETLKLVER--LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 59
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 60 LQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 113
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D+ + A
Sbjct: 114 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 168
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 169 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 219
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIE 660
+ + N L Q+ C E P RP+ +
Sbjct: 220 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFD 253
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 21/271 (7%)
Query: 409 LLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASL 464
++G F +G L+ S VA+K + + EFL I+ +H N+ L
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
G+ + ++ +F+ NG L L L G V++ + +++GIA G+ YL
Sbjct: 81 EGVVTNSM--PVMILTEFMENGALDSFLRLNDGQFTVIQ---LVGMLRGIASGMRYL--A 133
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL----ADDIVFSMLKASAAMGYLAPEYT 580
VH +L+A +L++ +SD GL + L +D S L + + APE
Sbjct: 134 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 581 TTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639
+FT SD +++G+++++++S G+ + Q ++ +D+ P +
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP-----PPDCPT 248
Query: 640 NLGQIALHCTHESPSHRPSIENVMQELSSII 670
+L Q+ L C + + RP V+ L +I
Sbjct: 249 SLHQLMLDCWQKDRNARPRFPQVVSALDKMI 279
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 122/271 (45%), Gaps = 21/271 (7%)
Query: 409 LLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASL 464
++G F +G L+ S VA+K + + EFL I+ +H N+ L
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
G+ + ++ +F+ NG L L L G V++ + +++GIA G+ YL
Sbjct: 83 EGVVTNSM--PVMILTEFMENGALDSFLRLNDGQFTVIQL---VGMLRGIASGMRYL--A 135
Query: 525 RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL----ADDIVFSMLKASAAMGYLAPEYT 580
VH +L+A +L++ +SD GL + L +D S L + + APE
Sbjct: 136 EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 581 TTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS 639
+FT SD +++G+++++++S G+ + Q ++ +D+ P +
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP-----PPDCPT 250
Query: 640 NLGQIALHCTHESPSHRPSIENVMQELSSII 670
+L Q+ L C + + RP V+ L +I
Sbjct: 251 SLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 119/252 (47%), Gaps = 14/252 (5%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F + G + + VAVK + K S + FL+ ++ +L+H+ L L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT 77
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ ++I +F+ G+LL L + G + +L I IA+G++Y+ +R +
Sbjct: 78 KEE--PIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYI--ERKNYI 131
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A VL+ ++D GL +++ D+ + A + + APE G FT KS
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHC 648
++++FG+++++I++ GK T S+ + + P +E + L I C
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRME-----NCPDELYDIMKMC 246
Query: 649 THESPSHRPSIE 660
E RP+ +
Sbjct: 247 WKEKAEERPTFD 258
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 37/267 (13%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VAVK + S + + K ++IL +L HEN+ +GIC G LI +F+P+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L ++L ++ + ++ I KG+ YL ++ VH +L+A VL+ +
Sbjct: 110 GSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQ 164
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K + D +K + + + APE +F SD+++FG+ + ++L+
Sbjct: 165 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
Query: 604 --------------------GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQ 643
G+ ++T E ++ PN + Q
Sbjct: 225 YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP--CPPNC--------PDEVYQ 274
Query: 644 IALHCTHESPSHRPSIENVMQELSSII 670
+ C PS+R S +N+++ +++
Sbjct: 275 LMRKCWEFQPSNRTSFQNLIEGFEALL 301
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 37/267 (13%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VAVK + S + + K ++IL +L HEN+ +GIC G LI +F+P+
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G+L ++L ++ + ++ I KG+ YL ++ VH +L+A VL+ +
Sbjct: 98 GSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQ 152
Query: 546 PLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ D GL K + D +K + + + APE +F SD+++FG+ + ++L
Sbjct: 153 VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL- 211
Query: 604 GKCSITPFTRQAAESSKVEDF---IDPNLEGKFSVSEASN-----------------LGQ 643
T ++SS + F I P G+ +V+ N + Q
Sbjct: 212 --------TYCDSDSSPMALFLKMIGPT-HGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQ 262
Query: 644 IALHCTHESPSHRPSIENVMQELSSII 670
+ C PS+R S +N+++ +++
Sbjct: 263 LMRKCWEFQPSNRTSFQNLIEGFEALL 289
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ +++ NG+L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEYMENGSL 133
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 134 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GFVHRDLAARNILINSNLVCKV 188
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 666 LSSII 670
L +I
Sbjct: 304 LDKLI 308
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 123/265 (46%), Gaps = 14/265 (5%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F + G + + VAVK + K S + FL+ ++ +L+H+ L L +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVT 78
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ ++I +++ G+LL L + G + +L I IA+G++Y+ +R +
Sbjct: 79 REE--PIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYI--ERKNYI 132
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A VL+ ++D GL +++ D+ + A + + APE G FT KS
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHC 648
D+++FG+++++I++ GK T ++ + + P +E + L I C
Sbjct: 193 DVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVE-----NCPDELYDIMKMC 247
Query: 649 THESPSHRPSIENVMQELSSIIGSS 673
E RP+ + + L ++
Sbjct: 248 WKEKAEERPTFDYLQSVLDDFYTAT 272
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ +++ NG+L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEYMENGSL 133
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 134 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKV 188
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 666 LSSII 670
L +I
Sbjct: 304 LDKLI 308
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ +++ NG+L
Sbjct: 64 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEYMENGSL 121
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 122 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKV 176
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 177 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 236
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 237 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 291
Query: 666 LSSII 670
L +I
Sbjct: 292 LDKLI 296
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ +++ NG+L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEYMENGSL 133
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 134 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKV 188
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 666 LSSII 670
L +I
Sbjct: 304 LDKLI 308
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ +++ NG+L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEYMENGSL 133
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 134 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKV 188
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 666 LSSII 670
L +I
Sbjct: 304 LDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ +++ NG+L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEYMENGSL 133
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 134 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKV 188
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 666 LSSII 670
L +I
Sbjct: 304 LDKLI 308
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 78 PHVCRLLGICLT---STVQLIMQLMPFGXLLDYVREHKD-NIGSQYLLNWCVQI------ 127
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 128 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ +++ NG+L
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEYMENGSL 104
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 105 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKV 159
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 160 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 219
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 220 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 274
Query: 666 LSSII 670
L +I
Sbjct: 275 LDKLI 279
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ +++ NG+L
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEYMENGSL 131
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 132 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKV 186
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 187 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 246
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 247 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 301
Query: 666 LSSII 670
L +I
Sbjct: 302 LDKLI 306
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ +++ NG+L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEYMENGSL 133
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 134 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKV 188
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 189 SDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 666 LSSII 670
L +I
Sbjct: 304 LDKLI 308
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 113/245 (46%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ +++ NG+L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEYMENGSL 133
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 134 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKV 188
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 189 SDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 666 LSSII 670
L +I
Sbjct: 304 LDKLI 308
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 125/287 (43%), Gaps = 43/287 (14%)
Query: 406 EANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASL 464
+LGK F K R+ G V+ +K + + + + FLK +K++ L+H N+
Sbjct: 14 HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD-EETQRTFLKEVKVMRCLEHPNVLKF 72
Query: 465 RGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLEWATRISVIKGIAKGISYL 521
G+ R I +++ G L ++ +D + W+ R+S K IA G++YL
Sbjct: 73 IGVLYKDKRLN--FITEYIKGGTLRGIIKSMDSQ------YPWSQRVSFAKDIASGMAYL 124
Query: 522 HGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDI-----VFSMLKASAAMGY-- 574
H ++H +L++ L+ N +++D GL +L+ D+ + S+ K Y
Sbjct: 125 HSM--NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 575 ------LAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITP--FTRQAAESSKVEDFID 626
+APE + EK D+++FG+++ +I+ G+ + P R V F+D
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGLNVRGFLD 241
Query: 627 ----PNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669
PN F I + C P RPS + L ++
Sbjct: 242 RYCPPNCPPSFF--------PITVRCCDLDPEKRPSFVKLEHWLETL 280
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 77 PHVCRLLGICLT---STVQLITQLMPFGXLLDYVREHKD-NIGSQYLLNWCVQI------ 126
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 81 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 130
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 131 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 79 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 128
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 129 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 78 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 127
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 128 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 25/264 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
+GK F G R G+ VAVKCI + FL ++T L+H NL L G+
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ---AFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +G +++ +++ G+L+ +L + VL + + + + YL G V
Sbjct: 70 EE-KGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--NFV 124
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A VL+ +SD GL K + + + + APE +F+ KS
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIA 645
D+++FG+++++I S F R ++D + P +E + + + ++
Sbjct: 181 DVWSFGILLWEIYS-------FGRVPYPRIPLKDVV-PRVEKGYKMDAPDGCPPAVYEVM 232
Query: 646 LHCTHESPSHRPSIENVMQELSSI 669
+C H + RPS + ++L I
Sbjct: 233 KNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 80 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 129
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 130 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 25/264 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
+GK F G R G+ VAVKCI + FL ++T L+H NL L G+
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ---AFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +G +++ +++ G+L+ +L + VL + + + + YL G V
Sbjct: 85 EE-KGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--NFV 139
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A VL+ +SD GL K + + + + APE +F+ KS
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASS----TQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIA 645
D+++FG+++++I S F R ++D + P +E + + + ++
Sbjct: 196 DVWSFGILLWEIYS-------FGRVPYPRIPLKDVV-PRVEKGYKMDAPDGCPPAVYEVM 247
Query: 646 LHCTHESPSHRPSIENVMQELSSI 669
+C H + RPS + ++L I
Sbjct: 248 KNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 102 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 151
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 152 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 77 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 126
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDG--PLYVIVEY 122
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 180
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEY 122
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 180
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 181 RDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 123/264 (46%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEY 122
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 180
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + + ++APE +T +S
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 79 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 128
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 129 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 80 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 129
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 130 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 77 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 126
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 80 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 129
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 130 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 80 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 129
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 130 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 84 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 133
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 134 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 25/264 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
+GK F G R G+ VAVKCI + FL ++T L+H NL L G+
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ---AFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +G +++ +++ G+L+ +L + VL + + + + YL G V
Sbjct: 76 EE-KGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN--NFV 130
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A VL+ +SD GL K + + + + APE F+ KS
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIA 645
D+++FG+++++I S F R ++D + P +E + + + ++
Sbjct: 187 DVWSFGILLWEIYS-------FGRVPYPRIPLKDVV-PRVEKGYKMDAPDGCPPAVYEVM 238
Query: 646 LHCTHESPSHRPSIENVMQELSSI 669
+C H + RPS + ++L I
Sbjct: 239 KNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 127/287 (44%), Gaps = 33/287 (11%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS 455
EV R T E LG + G + VAVK + + S D FL ++
Sbjct: 9 EVPRETLKLVER--LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQ 64
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSE----KVLEWATRISVI 511
L+H+ L L + + ++I +++ NG+L+ L +G + K+L+ A +I
Sbjct: 65 LQHQRLVRLYAVVTQE---PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI--- 118
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
A+G++++ + +H +L A +L+ + ++D GL +L+ D + A
Sbjct: 119 ---AEGMAFIEER--NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLE 630
+ + APE G FT KSD+++FG+++ +I++ G+ T + NLE
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLE 224
Query: 631 GKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + N L Q+ C E P RP+ + + L ++
Sbjct: 225 RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++
Sbjct: 52 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEY 109
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 110 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 167
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 168 RDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 227
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 228 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 280
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 281 DCWHAVPSQRPTFKQLVEDLDRIL 304
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++
Sbjct: 65 KEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEY 122
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 180
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 83 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 132
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 133 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++
Sbjct: 57 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEY 114
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 115 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 172
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 173 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 232
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 233 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 285
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 286 DCWHAVPSQRPTFKQLVEDLDRIL 309
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 87 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 136
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 137 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 101/183 (55%), Gaps = 14/183 (7%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G++VAVK + + S + +F + ++IL +L + + RG+ GR E L+ +++P+
Sbjct: 36 GALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPS 94
Query: 486 G---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR 542
G + LQ + ++L ++++ I KG+ YL +R VH +L+A +L+
Sbjct: 95 GCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYLGSRR--CVHRDLAARNILVES 146
Query: 543 RYNPLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQ 600
+ ++D GL KLL D +++ + + + APE + F+ +SD+++FG+++++
Sbjct: 147 EAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 206
Query: 601 ILS 603
+ +
Sbjct: 207 LFT 209
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++
Sbjct: 111 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEY 168
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 169 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 226
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 227 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 286
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 287 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 339
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 340 DCWHAVPSQRPTFKQLVEDLDRIL 363
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEY 122
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 123 ASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 180
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 23/258 (8%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F + + VAVK + S + FL ++ +L+H+ L L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA--FLAEANVMKTLQHDKLVKLHAVVT 80
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ ++I +F+ G+LL L + GS++ L I IA+G++++ + +
Sbjct: 81 KEP---IYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR--NYI 133
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +++ D+ + A + + APE G FT KS
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQI 644
D+++FG+++ +I++ G+ + + LE + + N L I
Sbjct: 194 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA---------LERGYRMPRPENCPEELYNI 244
Query: 645 ALHCTHESPSHRPSIENV 662
+ C P RP+ E +
Sbjct: 245 MMRCWKNRPEERPTFEYI 262
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEY 122
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 180
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++
Sbjct: 54 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEY 111
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 112 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 169
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 170 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 229
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 230 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 282
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 283 DCWHAVPSQRPTFKQLVEDLDRIL 306
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 77 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 126
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 101/183 (55%), Gaps = 14/183 (7%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G++VAVK + + S + +F + ++IL +L + + RG+ GR L+ +++P+
Sbjct: 39 GALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 97
Query: 486 G---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR 542
G + LQ + ++L ++++ I KG+ YL +R VH +L+A +L+
Sbjct: 98 GCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYLGSRR--CVHRDLAARNILVES 149
Query: 543 RYNPLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQ 600
+ ++D GL KLL D + +++ + + + APE + F+ +SD+++FG+++++
Sbjct: 150 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 209
Query: 601 ILS 603
+ +
Sbjct: 210 LFT 212
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 112/245 (45%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ + + NG+L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEXMENGSL 133
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 134 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKV 188
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 666 LSSII 670
L +I
Sbjct: 304 LDKLI 308
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 101/183 (55%), Gaps = 14/183 (7%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G++VAVK + + S + +F + ++IL +L + + RG+ GR L+ +++P+
Sbjct: 40 GALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 98
Query: 486 G---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR 542
G + LQ + ++L ++++ I KG+ YL +R VH +L+A +L+
Sbjct: 99 GCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYLGSRR--CVHRDLAARNILVES 150
Query: 543 RYNPLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQ 600
+ ++D GL KLL D + +++ + + + APE + F+ +SD+++FG+++++
Sbjct: 151 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 210
Query: 601 ILS 603
+ +
Sbjct: 211 LFT 213
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 34/264 (12%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 118
Query: 488 LLQHLDLEAGS--------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVL 539
L +L + + L I +AKG+ +L ++ +H +L+A +L
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK--XIHRDLAARNIL 176
Query: 540 IHRRYNPLLSDSGLHKLLADDIVFSML-KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIV 598
+ + + D GL + + D + A + ++APE +T +SD+++FG+++
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 599 FQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIALHCT 649
++I S S P F R+ E +++ D+ P + Q L C
Sbjct: 237 WEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMY------------QTMLDCW 284
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
H PS RP+ +++ L +++ ++
Sbjct: 285 HGEPSQRPTFSELVEHLGNLLQAN 308
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 121/264 (45%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ L G C G ++I ++
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDG--PLYVIVEY 122
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 180
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 112/245 (45%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ + + NG+L
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEXMENGSL 104
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 105 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GYVHRDLAARNILINSNLVCKV 159
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 160 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 219
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 220 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 274
Query: 666 LSSII 670
L +I
Sbjct: 275 LDKLI 279
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 23/262 (8%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F + + VAVK + S + FL ++ +L+H+ L L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA--FLAEANVMKTLQHDKLVKLHAVVT 253
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ ++I +F+ G+LL L + GS++ L I IA+G++++ + +
Sbjct: 254 KE---PIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR--NYI 306
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL +++ D+ + A + + APE G FT KS
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQI 644
D+++FG+++ +I++ G+ + + LE + + N L I
Sbjct: 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA---------LERGYRMPRPENCPEELYNI 417
Query: 645 ALHCTHESPSHRPSIENVMQEL 666
+ C P RP+ E + L
Sbjct: 418 MMRCWKNRPEERPTFEYIQSVL 439
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 101/183 (55%), Gaps = 14/183 (7%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G++VAVK + + S + +F + ++IL +L + + RG+ GR L+ +++P+
Sbjct: 52 GALVAVKQL-QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS 110
Query: 486 G---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR 542
G + LQ + ++L ++++ I KG+ YL +R VH +L+A +L+
Sbjct: 111 GCLRDFLQRHRARLDASRLLLYSSQ------ICKGMEYLGSRR--CVHRDLAARNILVES 162
Query: 543 RYNPLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQ 600
+ ++D GL KLL D + +++ + + + APE + F+ +SD+++FG+++++
Sbjct: 163 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYE 222
Query: 601 ILS 603
+ +
Sbjct: 223 LFT 225
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 71 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 120
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 121 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 112/245 (45%), Gaps = 15/245 (6%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K + + +FL I+ H N+ L G+ ++ + + NG+L
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK--PVMIVTEXMENGSL 133
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
L V++ + +++GIA G+ YL G VH +L+A +LI+ +
Sbjct: 134 DSFLRKHDAQFTVIQ---LVGMLRGIASGMKYLSDM--GAVHRDLAARNILINSNLVCKV 188
Query: 549 SDSGLHKLLADD--IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GK 605
SD GL ++L DD ++ + + +PE +FT SD++++G+++++++S G+
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ Q + E + P + + L Q+ L C + ++RP E ++
Sbjct: 249 RPYWEMSNQDVIKAVDEGYRLPP-----PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 666 LSSII 670
L +I
Sbjct: 304 LDKLI 308
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 132/268 (49%), Gaps = 23/268 (8%)
Query: 410 LGKSSF----SATYKGILRDGSV--VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLA 462
LG +F AT G+ ++ +V VAVK + T+ ++ + LKI++ L +HEN+
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHL------DLEAGSEKVLEWATRISVIKGIAK 516
+L G C+ G G +I ++ G+LL L DL+ + LE + +A+
Sbjct: 106 NLLG-ACTHG-GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 517 GISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAM--GY 574
G+++L K +H +++A VL+ + + D GL + + +D + ++K +A + +
Sbjct: 164 GMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY-IVKGNARLPVKW 220
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634
+APE +T +SD++++G+++++I S + P+ +SK + +
Sbjct: 221 MAPESIFDCVYTVQSDVWSYGILLWEIFS--LGLNPYPGILV-NSKFYKLVKDGYQMAQP 277
Query: 635 VSEASNLGQIALHCTHESPSHRPSIENV 662
N+ I C P+HRP+ + +
Sbjct: 278 AFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 25/264 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
+GK F G R G+ VAVKCI + FL ++T L+H NL L G+
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQ---AFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ +G +++ +++ G+L+ +L S VL + + + + YL G V
Sbjct: 257 EE-KGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEGN--NFV 311
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L+A VL+ +SD GL K + + + + APE +F+ KS
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASS----TQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIA 645
D+++FG+++++I S F R ++D + P +E + + + +
Sbjct: 368 DVWSFGILLWEIYS-------FGRVPYPRIPLKDVV-PRVEKGYKMDAPDGCPPAVYDVM 419
Query: 646 LHCTHESPSHRPSIENVMQELSSI 669
+C H + RP+ + ++L I
Sbjct: 420 KNCWHLDAATRPTFLQLREQLEHI 443
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 121/264 (45%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I +
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVGY 122
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 180
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 34/264 (12%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 118
Query: 488 LLQHLDLEAGS--------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVL 539
L +L + + L I +AKG+ +L ++ +H +L+A +L
Sbjct: 119 LSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK--XIHRDLAARNIL 176
Query: 540 IHRRYNPLLSDSGLHKLLADDIVFSML-KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIV 598
+ + + D GL + + D + A + ++APE +T +SD+++FG+++
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 236
Query: 599 FQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIALHCT 649
++I S S P F R+ E +++ D+ P + Q L C
Sbjct: 237 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QTMLDCW 284
Query: 650 HESPSHRPSIENVMQELSSIIGSS 673
H PS RP+ +++ L +++ ++
Sbjct: 285 HGEPSQRPTFSELVEHLGNLLQAN 308
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 121/264 (45%), Gaps = 28/264 (10%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDF 482
++ VAVK + + + D + + ++++ + KH+N+ +L G C G ++I +
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVAY 122
Query: 483 VPNGNLLQHL------------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
GNL ++L D+ E+ + + +S +A+G+ YL ++ +H
Sbjct: 123 ASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIH 180
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+A VL+ ++D GL + + + D + ++APE +T +S
Sbjct: 181 RDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEA---SNLGQIAL 646
D+++FG+++++I + S P VE+ EG A + L +
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYP-------GIPVEELFKLLKEGHRMDKPANCTNELYMMMR 293
Query: 647 HCTHESPSHRPSIENVMQELSSII 670
C H PS RP+ + ++++L I+
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRIL 317
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 395 EEVERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKIL 453
++ E + F LG +FS + G + AVKCI K + K E + +L
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 454 TSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKG 513
+KHEN+ +L I S +L+ V G L + +E G + +T +I+
Sbjct: 75 RKIKHENIVALEDIYESPNH--LYLVMQLVSGGELFDRI-VEKGFYTEKDAST---LIRQ 128
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNP---LLSDSGLHKLLADDIVFSMLKASA 570
+ + YLH R G+VH +L E +L + + ++SD GL K+ V S A
Sbjct: 129 VLDAVYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMST--ACG 184
Query: 571 AMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
GY+APE +++ D ++ G+I + +L C PF
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL---CGYPPF 222
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 132/268 (49%), Gaps = 23/268 (8%)
Query: 410 LGKSSF----SATYKGILRDGSV--VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLA 462
LG +F AT G+ ++ +V VAVK + T+ ++ + LKI++ L +HEN+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHL------DLEAGSEKVLEWATRISVIKGIAK 516
+L G C+ G G +I ++ G+LL L DL+ + LE + +A+
Sbjct: 114 NLLG-ACTHG-GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 517 GISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAM--GY 574
G+++L K +H +++A VL+ + + D GL + + +D + ++K +A + +
Sbjct: 172 GMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY-IVKGNARLPVKW 228
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS 634
+APE +T +SD++++G+++++I S + P+ +SK + +
Sbjct: 229 MAPESIFDCVYTVQSDVWSYGILLWEIFS--LGLNPYPGILV-NSKFYKLVKDGYQMAQP 285
Query: 635 VSEASNLGQIALHCTHESPSHRPSIENV 662
N+ I C P+HRP+ + +
Sbjct: 286 AFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 81 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 130
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D G KLL A++ + +
Sbjct: 131 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 74 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 123
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
A+G++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 124 AEGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 79 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 128
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D G KLL A++ + +
Sbjct: 129 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 79 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 128
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D G KLL A++ + +
Sbjct: 129 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +L +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 84 PHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 133
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 134 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 25/278 (8%)
Query: 403 CFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
C ++G F G L+ VA+K + +FL I+ H
Sbjct: 30 CIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 89
Query: 459 ENLASLRGIC--CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAK 516
N+ L G+ C +I +++ NG+L L G V++ + +++GI
Sbjct: 90 PNIIHLEGVVTKCKP----VMIITEYMENGSLDAFLRKNDGRFTVIQL---VGMLRGIGS 142
Query: 517 GISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD--IVFSMLKASAAMGY 574
G+ YL VH +L+A +L++ +SD G+ ++L DD ++ + +
Sbjct: 143 GMKYLSDM--SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW 200
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDF-IDPNLEGK 632
APE +FT SD++++G+++++++S G+ + Q + E + + P ++
Sbjct: 201 TAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCP 260
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ L Q+ L C + S RP ++ L +I
Sbjct: 261 IA------LHQLMLDCWQKERSDRPKFGQIVNMLDKLI 292
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+ + + + E L ++ S+ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 111 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 160
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 161 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 84 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 133
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D G KLL A++ + +
Sbjct: 134 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 79 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 128
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D G KLL A++ + +
Sbjct: 129 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 36/266 (13%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 120
Query: 488 LLQHL----------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEK 537
L +L E + L I +AKG+ +L ++ +H +L+A
Sbjct: 121 LSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRK--XIHRDLAARN 178
Query: 538 VLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGM 596
+L+ + + D GL + + D A + ++APE +T +SD+++FG+
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 597 IVFQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIALH 647
++++I S S P F R+ E +++ D+ P + Q L
Sbjct: 239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QTMLD 286
Query: 648 CTHESPSHRPSIENVMQELSSIIGSS 673
C H PS RP+ +++ L +++ ++
Sbjct: 287 CWHGEPSQRPTFSELVEHLGNLLQAN 312
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 20/205 (9%)
Query: 408 NLLGKSSFSATYKGI-LRDGSVVAVK-CIAKTSCKSDEGEF---LKGLKILTSLKHENLA 462
+LG F +KG+ + +G + + CI KS F + + SL H ++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGS---EKVLEWATRISVIKGIAKGIS 519
L G+C L+ ++P G+LL H+ G+ + +L W +I AKG+
Sbjct: 97 RLLGLCPGSS---LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMY 147
Query: 520 YLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA-DDIVFSMLKASAAMGYLAPE 578
YL + G+VH NL+A VL+ ++D G+ LL DD +A + ++A E
Sbjct: 148 YL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 579 YTTTGRFTEKSDIYAFGMIVFQILS 603
G++T +SD++++G+ V+++++
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +L +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 77 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 126
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 122/276 (44%), Gaps = 21/276 (7%)
Query: 403 CFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
C ++G F G L+ VA+K + +FL I+ H
Sbjct: 9 CIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 68
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGI 518
N+ L G+ +K + +I +++ NG+L L G V++ + +++GI G+
Sbjct: 69 PNIIHLEGVV-TKCK-PVMIITEYMENGSLDAFLRKNDGRFTVIQ---LVGMLRGIGSGM 123
Query: 519 SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD--IVFSMLKASAAMGYLA 576
YL VH +L+A +L++ +SD G+ ++L DD ++ + + A
Sbjct: 124 KYLSDM--SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 181
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDF-IDPNLEGKFS 634
PE +FT SD++++G+++++++S G+ + Q + E + + P ++ +
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIA 241
Query: 635 VSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
L Q+ L C + S RP ++ L +I
Sbjct: 242 ------LHQLMLDCWQKERSDRPKFGQIVNMLDKLI 271
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 16/265 (6%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR 465
+G+ F ++GI VA+K + S +FL+ + H ++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR 525
G+ ++I + G L L + S L+ A+ I ++ ++YL KR
Sbjct: 78 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 131
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +++A VL+ L D GL + + D + K + ++APE RF
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T SD++ FG+ +++IL + PF Q +++ V I+ + L +
Sbjct: 190 TSASDVWMFGVCMWEILMH--GVKPF--QGVKNNDVIGRIENGERLPMPPNCPPTLYSLM 245
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C PS RP + +LS+I+
Sbjct: 246 TKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 27/279 (9%)
Query: 403 CFSEANLLGKSSFSATYKGILR----DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
C ++G F G L+ VA+K + +FL I+ H
Sbjct: 15 CIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 74
Query: 459 ENLASLRGICCSKGRGEC---FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIA 515
N+ L G+ +C +I +++ NG+L L G V++ + +++GI
Sbjct: 75 PNIIHLEGVVT-----KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQ---LVGMLRGIG 126
Query: 516 KGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD--IVFSMLKASAAMG 573
G+ YL VH +L+A +L++ +SD G+ ++L DD ++ +
Sbjct: 127 SGMKYLSDM--SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 184
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDF-IDPNLEG 631
+ APE +FT SD++++G+++++++S G+ + Q + E + + P ++
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 244
Query: 632 KFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ L Q+ L C + S RP ++ L +I
Sbjct: 245 PIA------LHQLMLDCWQKERSDRPKFGQIVNMLDKLI 277
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 134/303 (44%), Gaps = 22/303 (7%)
Query: 381 GFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILR--DGSVV--AVKCI-A 435
G S E+ E LE+V Q F+ +LGK F + + L+ DGS V AVK + A
Sbjct: 6 GISDELKE----KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKA 61
Query: 436 KTSCKSDEGEFLKGLKILTSLKHENLASLRGICC-SKGRGEC---FLIYDFVPNGNLLQH 491
SD EFL+ + H ++A L G+ S+ +G +I F+ +G+L
Sbjct: 62 DIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAF 121
Query: 492 LDLEAGSEKV--LEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLS 549
L E L T + + IA G+ YL + +H +L+A ++ ++
Sbjct: 122 LLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR--NFIHRDLAARNCMLAEDMTVCVA 179
Query: 550 DSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSI 608
D GL K+ + D + + +LA E +T SD++AFG+ +++I++
Sbjct: 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR--GQ 237
Query: 609 TPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSS 668
TP+ E++++ +++ K + + C P RPS + EL +
Sbjct: 238 TPYA--GIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELEN 295
Query: 669 IIG 671
I+G
Sbjct: 296 ILG 298
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +LG +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 77 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 126
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D G KLL A++ + +
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 123/268 (45%), Gaps = 38/268 (14%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 120
Query: 488 LLQHLD---------LEAGSEKVLEWATRISVI---KGIAKGISYLHGKRPGLVHPNLSA 535
L +L EA + ++ T +I +AKG+ +L ++ +H +L+A
Sbjct: 121 LSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 178
Query: 536 EKVLIHRRYNPLLSDSGLHKLLADDIVFSML-KASAAMGYLAPEYTTTGRFTEKSDIYAF 594
+L+ + + D GL + + D + A + ++APE +T +SD+++F
Sbjct: 179 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 238
Query: 595 GMIVFQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIA 645
G+++++I S S P F R+ E +++ D+ P + Q
Sbjct: 239 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QTM 286
Query: 646 LHCTHESPSHRPSIENVMQELSSIIGSS 673
L C H PS RP+ +++ L +++ ++
Sbjct: 287 LDCWHGEPSQRPTFSELVEHLGNLLQAN 314
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 16/265 (6%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR 465
+G+ F ++GI VA+K + S +FL+ + H ++ L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR 525
G+ ++I + G L L + S L+ A+ I ++ ++YL KR
Sbjct: 106 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 159
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +++A VL+ L D GL + + D + K + ++APE RF
Sbjct: 160 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T SD++ FG+ +++IL + PF Q +++ V I+ + L +
Sbjct: 218 TSASDVWMFGVCMWEILMH--GVKPF--QGVKNNDVIGRIENGERLPMPPNCPPTLYSLM 273
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C PS RP + +LS+I+
Sbjct: 274 TKCWAYDPSRRPRFTELKAQLSTIL 298
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 121/269 (44%), Gaps = 41/269 (15%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 119
Query: 488 LLQHLDLEAGSEKVLEWATRISVIKG-------------IAKGISYLHGKRPGLVHPNLS 534
L +L + + + + T + K +AKG+ +L ++ +H +L+
Sbjct: 120 LSTYL--RSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLA 175
Query: 535 AEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYA 593
A +L+ + + D GL + + D A + ++APE +T +SD+++
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 594 FGMIVFQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQI 644
FG+++++I S S P F R+ E +++ D+ P + Q
Sbjct: 236 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QT 283
Query: 645 ALHCTHESPSHRPSIENVMQELSSIIGSS 673
L C H PS RP+ +++ L +++ ++
Sbjct: 284 MLDCWHGEPSQRPTFSELVEHLGNLLQAN 312
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 106/210 (50%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVV----AVKCIAKTSCKSDEGEFLKGLKILTSLKH 458
F + +L +F YKG+ + +G V A+K + + + E L ++ S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLL----QHLDLEAGSEKVLEWATRISVIKGI 514
++ L GIC + LI +P G LL +H D GS+ +L W +I
Sbjct: 84 PHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQI------ 133
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAAMG 573
AKG++YL +R LVH +L+A VL+ + ++D GL KLL A++ + +
Sbjct: 134 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
++A E +T +SD++++G+ V+++++
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++ GN
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGN 161
Query: 488 LLQHLDLEA------------GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L ++L E+ L +S +A+G+ YL K+ +H +L+A
Sbjct: 162 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 219
Query: 536 EKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
VL+ ++D GL + + D + ++APE +T +SD+++F
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279
Query: 595 GMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIALHCTH 650
G+++++I + S P VE+ EG + + SN L + C H
Sbjct: 280 GVLLWEIFTLGGSPYP-------GVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCWH 331
Query: 651 ESPSHRPSIENVMQELSSIIG 671
PS RP+ + ++++L I+
Sbjct: 332 AVPSQRPTFKQLVEDLDRIVA 352
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 20/205 (9%)
Query: 408 NLLGKSSFSATYKGI-LRDGSVVAVK-CIAKTSCKSDEGEF---LKGLKILTSLKHENLA 462
+LG F +KG+ + +G + + CI KS F + + SL H ++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGS---EKVLEWATRISVIKGIAKGIS 519
L G+C L+ ++P G+LL H+ G+ + +L W +I AKG+
Sbjct: 79 RLLGLCPGSS---LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMY 129
Query: 520 YLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA-DDIVFSMLKASAAMGYLAPE 578
YL + G+VH NL+A VL+ ++D G+ LL DD +A + ++A E
Sbjct: 130 YL--EEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 579 YTTTGRFTEKSDIYAFGMIVFQILS 603
G++T +SD++++G+ V+++++
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 16/265 (6%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR 465
+G+ F ++GI VA+K + S +FL+ + H ++ L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR 525
G+ ++I + G L L + S L+ A+ I ++ ++YL KR
Sbjct: 83 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 136
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +++A VL+ L D GL + + D + K + ++APE RF
Sbjct: 137 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T SD++ FG+ +++IL + PF Q +++ V I+ + L +
Sbjct: 195 TSASDVWMFGVCMWEILMH--GVKPF--QGVKNNDVIGRIENGERLPMPPNCPPTLYSLM 250
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C PS RP + +LS+I+
Sbjct: 251 TKCWAYDPSRRPRFTELKAQLSTIL 275
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 16/265 (6%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR 465
+G+ F ++GI VA+K + S +FL+ + H ++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR 525
G+ ++I + G L L + S L+ A+ I ++ ++YL KR
Sbjct: 78 GVITE---NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESKR 131
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +++A VL+ L D GL + + D + K + ++APE RF
Sbjct: 132 --FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T SD++ FG+ +++IL + PF Q +++ V I+ + L +
Sbjct: 190 TSASDVWMFGVCMWEILMH--GVKPF--QGVKNNDVIGRIENGERLPMPPNCPPTLYSLM 245
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C PS RP + +LS+I+
Sbjct: 246 TKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 16/265 (6%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR 465
+G+ F ++GI VA+K + S +FL+ + H ++ L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR 525
G+ ++I + G L L + S L+ A+ I ++ ++YL KR
Sbjct: 80 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 133
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +++A VL+ L D GL + + D + K + ++APE RF
Sbjct: 134 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T SD++ FG+ +++IL + PF Q +++ V I+ + L +
Sbjct: 192 TSASDVWMFGVCMWEILMH--GVKPF--QGVKNNDVIGRIENGERLPMPPNCPPTLYSLM 247
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C PS RP + +LS+I+
Sbjct: 248 TKCWAYDPSRRPRFTELKAQLSTIL 272
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 133/291 (45%), Gaps = 50/291 (17%)
Query: 408 NLLGKSSFSATYKG-ILRDGSVV--AVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLAS 463
+++G+ +F K I +DG + A+K + + + K D +F L++L L H N+ +
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEA--------------GSEKVLEWA 505
L G C + RG +L ++ P+GNLL L LE S+++L +A
Sbjct: 88 LLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 506 TRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSM 565
+A+G+ YL K+ +H NL+A +L+ Y ++D GL + ++
Sbjct: 146 A------DVARGMDYLSQKQ--FIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKK 195
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS----GKCSIT--PFTRQAAESS 619
+ ++A E +T SD++++G+++++I+S C +T + +
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 255
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
++E ++ + E + + C E P RPS ++ L+ ++
Sbjct: 256 RLEKPLNCDDE----------VYDLMRQCWREKPYERPSFAQILVSLNRML 296
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 16/265 (6%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR 465
+G+ F ++GI VA+K + S +FL+ + H ++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR 525
G+ ++I + G L L + S L+ A+ I ++ ++YL KR
Sbjct: 78 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 131
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +++A VL+ L D GL + + D + K + ++APE RF
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T SD++ FG+ +++IL + PF Q +++ V I+ + L +
Sbjct: 190 TSASDVWMFGVCMWEILMH--GVKPF--QGVKNNDVIGRIENGERLPMPPNCPPTLYSLM 245
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C PS RP + +LS+I+
Sbjct: 246 TKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 16/265 (6%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR 465
+G+ F ++GI VA+K + S +FL+ + H ++ L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR 525
G+ ++I + G L L + S L+ A+ I ++ ++YL KR
Sbjct: 81 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 134
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +++A VL+ L D GL + + D + K + ++APE RF
Sbjct: 135 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T SD++ FG+ +++IL + PF Q +++ V I+ + L +
Sbjct: 193 TSASDVWMFGVCMWEILMH--GVKPF--QGVKNNDVIGRIENGERLPMPPNCPPTLYSLM 248
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C PS RP + +LS+I+
Sbjct: 249 TKCWAYDPSRRPRFTELKAQLSTIL 273
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 16/265 (6%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR 465
+G+ F ++GI VA+K + S +FL+ + H ++ L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR 525
G+ ++I + G L L + S L+ A+ I ++ ++YL KR
Sbjct: 75 GVITE---NPVWIIMELCTLGELRSFLQVRKYS---LDLASLILYAYQLSTALAYLESKR 128
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +++A VL+ L D GL + + D + K + ++APE RF
Sbjct: 129 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T SD++ FG+ +++IL + PF Q +++ V I+ + L +
Sbjct: 187 TSASDVWMFGVCMWEILMH--GVKPF--QGVKNNDVIGRIENGERLPMPPNCPPTLYSLM 242
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C PS RP + +LS+I+
Sbjct: 243 TKCWAYDPSRRPRFTELKAQLSTIL 267
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 112/229 (48%), Gaps = 19/229 (8%)
Query: 386 VLESFMFNLEEVERATQCFSEANLL------GKSSFSATYKGI--LRDGSV-VAVKCIAK 436
V ES + EE++ NLL G +F + +G+ +R + VA+K + +
Sbjct: 314 VFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ 373
Query: 437 TSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEA 496
+ K+D E ++ +I+ L + + L G+C ++ L+ + G L + L
Sbjct: 374 GTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA---LMLVMEMAGGGPLHKFL---V 427
Query: 497 GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556
G + + + ++ ++ G+ YL K VH NL+A VL+ R+ +SD GL K
Sbjct: 428 GKREEIPVSNVAELLHQVSMGMKYLEEK--NFVHRNLAARNVLLVNRHYAKISDFGLSKA 485
Query: 557 L-ADDIVFSMLKASA-AMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
L ADD ++ A + + APE +F+ +SD++++G+ +++ LS
Sbjct: 486 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++ GN
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGN 120
Query: 488 LLQHLDLEA------------GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L ++L E+ L +S +A+G+ YL K+ +H +L+A
Sbjct: 121 LREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 178
Query: 536 EKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
VL+ ++D GL + + D + ++APE +T +SD+++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 595 GMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIALHCTH 650
G+++++I + S P VE+ EG + + SN L + C H
Sbjct: 239 GVLLWEIFTLGGSPYP-------GVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWH 290
Query: 651 ESPSHRPSIENVMQELSSIIG 671
PS RP+ + ++++L I+
Sbjct: 291 AVPSQRPTFKQLVEDLDRIVA 311
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++ GN
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGN 120
Query: 488 LLQHLDLEA------------GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L ++L E+ L +S +A+G+ YL K+ +H +L+A
Sbjct: 121 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 178
Query: 536 EKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
VL+ ++D GL + + D + ++APE +T +SD+++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 595 GMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIALHCTH 650
G+++++I + S P VE+ EG + + SN L + C H
Sbjct: 239 GVLLWEIFTLGGSPYP-------GVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWH 290
Query: 651 ESPSHRPSIENVMQELSSIIG 671
PS RP+ + ++++L I+
Sbjct: 291 AVPSQRPTFKQLVEDLDRIVA 311
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++ GN
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGN 113
Query: 488 LLQHLDLEA------------GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L ++L E+ L +S +A+G+ YL K+ +H +L+A
Sbjct: 114 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 171
Query: 536 EKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
VL+ ++D GL + + D + ++APE +T +SD+++F
Sbjct: 172 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 231
Query: 595 GMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIALHCTH 650
G+++++I + S P VE+ EG + + SN L + C H
Sbjct: 232 GVLLWEIFTLGGSPYP-------GVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWH 283
Query: 651 ESPSHRPSIENVMQELSSIIG 671
PS RP+ + ++++L I+
Sbjct: 284 AVPSQRPTFKQLVEDLDRIVA 304
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++ GN
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGN 120
Query: 488 LLQHLDLEA------------GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L ++L E+ L +S +A+G+ YL K+ +H +L+A
Sbjct: 121 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 178
Query: 536 EKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
VL+ ++D GL + + D + ++APE +T +SD+++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 595 GMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIALHCTH 650
G+++++I + S P VE+ EG + + SN L + C H
Sbjct: 239 GVLLWEIFTLGGSPYP-------GVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWH 290
Query: 651 ESPSHRPSIENVMQELSSIIG 671
PS RP+ + ++++L I+
Sbjct: 291 AVPSQRPTFKQLVEDLDRIVA 311
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++ GN
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGN 105
Query: 488 LLQHLDLEA------------GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L ++L E+ L +S +A+G+ YL K+ +H +L+A
Sbjct: 106 LREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 163
Query: 536 EKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
VL+ ++D GL + + D + ++APE +T +SD+++F
Sbjct: 164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 223
Query: 595 GMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIALHCTH 650
G+++++I + S P VE+ EG + + SN L + C H
Sbjct: 224 GVLLWEIFTLGGSPYP-------GVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWH 275
Query: 651 ESPSHRPSIENVMQELSSIIG 671
PS RP+ + ++++L I+
Sbjct: 276 AVPSQRPTFKQLVEDLDRIVA 296
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 16/265 (6%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR 465
+G+ F ++GI VA+K + S +FL+ + H ++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR 525
G+ ++I + G L L + S L+ A+ I ++ ++YL KR
Sbjct: 458 GVITE---NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESKR 511
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +++A VL+ L D GL + + D + K + ++APE RF
Sbjct: 512 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T SD++ FG+ +++IL + PF Q +++ V I+ + L +
Sbjct: 570 TSASDVWMFGVCMWEILMH--GVKPF--QGVKNNDVIGRIENGERLPMPPNCPPTLYSLM 625
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C PS RP + +LS+I+
Sbjct: 626 TKCWAYDPSRRPRFTELKAQLSTIL 650
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++ GN
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGN 112
Query: 488 LLQHLDLEA------------GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L ++L E+ L +S +A+G+ YL K+ +H +L+A
Sbjct: 113 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 170
Query: 536 EKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
VL+ ++D GL + + D + ++APE +T +SD+++F
Sbjct: 171 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 230
Query: 595 GMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIALHCTH 650
G+++++I + S P VE+ EG + + SN L + C H
Sbjct: 231 GVLLWEIFTLGGSPYP-------GVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWH 282
Query: 651 ESPSHRPSIENVMQELSSIIG 671
PS RP+ + ++++L I+
Sbjct: 283 AVPSQRPTFKQLVEDLDRIVA 303
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++ GN
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGN 109
Query: 488 LLQHLDLEA------------GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L ++L E+ L +S +A+G+ YL K+ +H +L+A
Sbjct: 110 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 167
Query: 536 EKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
VL+ ++D GL + + D + ++APE +T +SD+++F
Sbjct: 168 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 227
Query: 595 GMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIALHCTH 650
G+++++I + S P VE+ EG + + SN L + C H
Sbjct: 228 GVLLWEIFTLGGSPYP-------GVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWH 279
Query: 651 ESPSHRPSIENVMQELSSIIG 671
PS RP+ + ++++L I+
Sbjct: 280 AVPSQRPTFKQLVEDLDRIVA 300
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 155
Query: 488 LLQHLDLEAGS------------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L +L + + L I +AKG+ +L ++ +H +L+A
Sbjct: 156 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 213
Query: 536 EKVLIHRRYNPLLSDSGLHKLLADDIVFSML-KASAAMGYLAPEYTTTGRFTEKSDIYAF 594
+L+ + + D GL + + D + A + ++APE +T +SD+++F
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273
Query: 595 GMIVFQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIA 645
G+++++I S S P F R+ E +++ D+ P + Q
Sbjct: 274 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QTM 321
Query: 646 LHCTHESPSHRPSIENVMQELSSIIGSS 673
L C H PS RP+ +++ L +++ ++
Sbjct: 322 LDCWHGEPSQRPTFSELVEHLGNLLQAN 349
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + D + + ++++ + KH+N+ +L G C G ++I ++ GN
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG--PLYVIVEYASKGN 120
Query: 488 LLQHLDLEA------------GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L ++L E+ L +S +A+G+ YL K+ +H +L+A
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAA 178
Query: 536 EKVLIHRRYNPLLSDSGLHKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
VL+ ++D GL + + D + ++APE +T +SD+++F
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 595 GMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQIALHCTH 650
G+++++I + S P VE+ EG + + SN L + C H
Sbjct: 239 GVLLWEIFTLGGSPYP-------GVPVEELFKLLKEG-HRMDKPSNCTNELYMMMRDCWH 290
Query: 651 ESPSHRPSIENVMQELSSIIG 671
PS RP+ + ++++L I+
Sbjct: 291 AVPSQRPTFKQLVEDLDRIVA 311
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 118
Query: 488 LLQHLDLEAGS------------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L +L + + L I +AKG+ +L ++ +H +L+A
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 176
Query: 536 EKVLIHRRYNPLLSDSGLHKLLADDIVFSML-KASAAMGYLAPEYTTTGRFTEKSDIYAF 594
+L+ + + D GL + + D + A + ++APE +T +SD+++F
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 595 GMIVFQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIA 645
G+++++I S S P F R+ E +++ D+ P + Q
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QTM 284
Query: 646 LHCTHESPSHRPSIENVMQELSSIIGSS 673
L C H PS RP+ +++ L +++ ++
Sbjct: 285 LDCWHGEPSQRPTFSELVEHLGNLLQAN 312
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 111/265 (41%), Gaps = 16/265 (6%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR 465
+G+ F ++GI VA+K + S +FL+ + H ++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR 525
G+ ++I + G L L + S L+ A+ I ++ ++YL KR
Sbjct: 458 GVITE---NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESKR 511
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +++A VL+ L D GL + + D + K + ++APE RF
Sbjct: 512 --FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T SD++ FG+ +++IL + PF Q +++ V I+ + L +
Sbjct: 570 TSASDVWMFGVCMWEILMH--GVKPF--QGVKNNDVIGRIENGERLPMPPNCPPTLYSLM 625
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C PS RP + +LS+I+
Sbjct: 626 TKCWAYDPSRRPRFTELKAQLSTIL 650
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 38/268 (14%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 118
Query: 488 LLQHLDLEAGS------------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L +L + + L I +AKG+ +L ++ +H +L+A
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 176
Query: 536 EKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
+L+ + + D GL + + D A + ++APE +T +SD+++F
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 595 GMIVFQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIA 645
G+++++I S S P F R+ E +++ D+ P + Q
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QTM 284
Query: 646 LHCTHESPSHRPSIENVMQELSSIIGSS 673
L C H PS RP+ +++ L +++ ++
Sbjct: 285 LDCWHGEPSQRPTFSELVEHLGNLLQAN 312
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 120/249 (48%), Gaps = 37/249 (14%)
Query: 388 ESFMFNLEEVERATQC-FSEANL-----LGKSSF----SATYKGILRDGS--VVAVKCIA 435
E F + E E + F NL LG +F +AT GI + G VAVK +
Sbjct: 25 EYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK 84
Query: 436 KTSCKSDEGEFLKGLKILTSL-KHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-- 492
+ + S+ + LK++T L HEN+ +L G C G +LI+++ G+LL +L
Sbjct: 85 EKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG--PIYLIFEYCCYGDLLNYLRS 142
Query: 493 --------DLEAGSEKVLEWATRISVIK---------GIAKGISYLHGKRPGLVHPNLSA 535
++E ++K LE ++V+ +AKG+ +L K VH +L+A
Sbjct: 143 KREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK--SCVHRDLAA 200
Query: 536 EKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
VL+ + D GL + +++D A + ++APE G +T KSD++++
Sbjct: 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 260
Query: 595 GMIVFQILS 603
G+++++I S
Sbjct: 261 GILLWEIFS 269
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 38/268 (14%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 118
Query: 488 LLQHLDLEAGS------------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L +L + + L I +AKG+ +L ++ +H +L+A
Sbjct: 119 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 176
Query: 536 EKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
+L+ + + D GL + + D A + ++APE +T +SD+++F
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236
Query: 595 GMIVFQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIA 645
G+++++I S S P F R+ E +++ D+ P + Q
Sbjct: 237 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QTM 284
Query: 646 LHCTHESPSHRPSIENVMQELSSIIGSS 673
L C H PS RP+ +++ L +++ ++
Sbjct: 285 LDCWHGEPSQRPTFSELVEHLGNLLQAN 312
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVITEFCKFGN 109
Query: 488 LLQHLDLEAGS------------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L +L + + L I +AKG+ +L ++ +H +L+A
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 167
Query: 536 EKVLIHRRYNPLLSDSGLHKLLADDIVFSML-KASAAMGYLAPEYTTTGRFTEKSDIYAF 594
+L+ + + D GL + + D + A + ++APE +T +SD+++F
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 595 GMIVFQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIA 645
G+++++I S S P F R+ E +++ D+ P + Q
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QTM 275
Query: 646 LHCTHESPSHRPSIENVMQELSSIIGSS 673
L C H PS RP+ +++ L +++ ++
Sbjct: 276 LDCWHGEPSQRPTFSELVEHLGNLLQAN 303
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 38/268 (14%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 109
Query: 488 LLQHLDLEAGS------------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L +L + + L I +AKG+ +L ++ +H +L+A
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 167
Query: 536 EKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
+L+ + + D GL + + D A + ++APE +T +SD+++F
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 595 GMIVFQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIA 645
G+++++I S S P F R+ E +++ D+ P + Q
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QTM 275
Query: 646 LHCTHESPSHRPSIENVMQELSSIIGSS 673
L C H PS RP+ +++ L +++ ++
Sbjct: 276 LDCWHGEPSQRPTFSELVEHLGNLLQAN 303
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 119/268 (44%), Gaps = 38/268 (14%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVITEFCKFGN 109
Query: 488 LLQHLDLEAGS------------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L +L + + L I +AKG+ +L ++ +H +L+A
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 167
Query: 536 EKVLIHRRYNPLLSDSGLHKLLADDIVFSML-KASAAMGYLAPEYTTTGRFTEKSDIYAF 594
+L+ + + D GL + + D + A + ++APE +T +SD+++F
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 595 GMIVFQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIA 645
G+++++I S S P F R+ E +++ D+ P + Q
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QTM 275
Query: 646 LHCTHESPSHRPSIENVMQELSSIIGSS 673
L C H PS RP+ +++ L +++ ++
Sbjct: 276 LDCWHGEPSQRPTFSELVEHLGNLLQAN 303
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 16/265 (6%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR 465
+G+ F ++GI VA+K + S +FL+ + H ++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKR 525
G+ ++I + G L L + S L+ A+ I ++ ++YL KR
Sbjct: 78 GVITE---NPVWIIMELCTLGELRSFLQVRKFS---LDLASLILYAYQLSTALAYLESKR 131
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +++A VL+ L D GL + + D K + ++APE RF
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T SD++ FG+ +++IL + PF Q +++ V I+ + L +
Sbjct: 190 TSASDVWMFGVCMWEILMH--GVKPF--QGVKNNDVIGRIENGERLPMPPNCPPTLYSLM 245
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
C PS RP + +LS+I+
Sbjct: 246 TKCWAYDPSRRPRFTELKAQLSTIL 270
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 38/268 (14%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVITEFCKFGN 109
Query: 488 LLQHLDLEAGS------------EKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSA 535
L +L + + L I +AKG+ +L ++ +H +L+A
Sbjct: 110 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAA 167
Query: 536 EKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
+L+ + + D GL + + D A + ++APE +T +SD+++F
Sbjct: 168 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF 227
Query: 595 GMIVFQILSGKCSITP-------FTRQAAESSKVE--DFIDPNLEGKFSVSEASNLGQIA 645
G+++++I S S P F R+ E +++ D+ P + Q
Sbjct: 228 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY------------QTM 275
Query: 646 LHCTHESPSHRPSIENVMQELSSIIGSS 673
L C H PS RP+ +++ L +++ ++
Sbjct: 276 LDCWHGEPSQRPTFSELVEHLGNLLQAN 303
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 133/291 (45%), Gaps = 50/291 (17%)
Query: 408 NLLGKSSFSATYKG-ILRDGSVV--AVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLAS 463
+++G+ +F K I +DG + A+K + + + K D +F L++L L H N+ +
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEA--------------GSEKVLEWA 505
L G C + RG +L ++ P+GNLL L LE S+++L +A
Sbjct: 81 LLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 506 TRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSM 565
+A+G+ YL K+ +H +L+A +L+ Y ++D GL + ++
Sbjct: 139 A------DVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKK 188
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS----GKCSIT--PFTRQAAESS 619
+ ++A E +T SD++++G+++++I+S C +T + +
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 248
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
++E ++ + E + + C E P RPS ++ L+ ++
Sbjct: 249 RLEKPLNCDDE----------VYDLMRQCWREKPYERPSFAQILVSLNRML 289
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 139/294 (47%), Gaps = 41/294 (13%)
Query: 394 LEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGL--- 450
L E++ A E ++G F Y+ G VAVK A+ D + ++ +
Sbjct: 1 LLEIDFAELTLEE--IIGIGGFGKVYRAFWI-GDEVAVKA-ARHDPDEDISQTIENVRQE 56
Query: 451 -KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVL-EWATRI 508
K+ LKH N+ +LRG+C K C L+ +F G L + L + +L WA +I
Sbjct: 57 AKLFAMLKHPNIIALRGVCL-KEPNLC-LVMEFARGGPLNRVLSGKRIPPDILVNWAVQI 114
Query: 509 SVIKGIAKGISYLHGKR-PGLVHPNLSAEKVLIHRRY------NPLL--SDSGLHKLLAD 559
A+G++YLH + ++H +L + +LI ++ N +L +D GL +
Sbjct: 115 ------ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR 168
Query: 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
+ + A+ A ++APE F++ SD++++G++++++L+G+ PF + +
Sbjct: 169 T---TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE---VPF--RGIDGL 220
Query: 620 KVEDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVMQELSSI 669
V + N K ++ S ++ C + P RPS N++ +L++I
Sbjct: 221 AVAYGVAMN---KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 133/291 (45%), Gaps = 50/291 (17%)
Query: 408 NLLGKSSFSATYKG-ILRDGSVV--AVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLAS 463
+++G+ +F K I +DG + A+K + + + K D +F L++L L H N+ +
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLD----LEA--------------GSEKVLEWA 505
L G C + RG +L ++ P+GNLL L LE S+++L +A
Sbjct: 91 LLGAC--EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 506 TRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSM 565
+A+G+ YL K+ +H +L+A +L+ Y ++D GL + ++
Sbjct: 149 A------DVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKK 198
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS----GKCSIT--PFTRQAAESS 619
+ ++A E +T SD++++G+++++I+S C +T + +
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY 258
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
++E ++ + E + + C E P RPS ++ L+ ++
Sbjct: 259 RLEKPLNCDDE----------VYDLMRQCWREKPYERPSFAQILVSLNRML 299
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATYKGIL----RDGSVVAVKCIAKTSCKSDEGEFLKGL 450
++ E + ++LG +FS IL R +VA+KCIAK + + EG +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEI 67
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISV 510
+L +KH N+ +L I S G +LI V G L + +E G + A+R+
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGH--LYLIMQLVSGGELFDRI-VEKGFYTERD-ASRL-- 121
Query: 511 IKGIAKGISYLHGKRPGLVHPNLSAEKVLIH---RRYNPLLSDSGLHKLLADDIVFSMLK 567
I + + YLH G+VH +L E +L + ++SD GL K+ V S
Sbjct: 122 IFQVLDAVKYLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-- 177
Query: 568 ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
A GY+APE +++ D ++ G+I + +L C PF
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL---CGYPPF 218
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 129/278 (46%), Gaps = 29/278 (10%)
Query: 408 NLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGE----FLKGLKILTSLKHENLAS 463
++GK F Y G D + ++C K+ + E + FL+ ++ L H N+ +
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
L GI G ++ ++ +G+LLQ + + V + IS +A+G+ YL
Sbjct: 87 LIGIMLPP-EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYLAE 142
Query: 524 KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLK---ASAAMGYLAPEYT 580
++ VH +L+A ++ + ++D GL + + D +S+ + A + + A E
Sbjct: 143 QK--FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 581 TTGRFTEKSDIYAFGMIVFQILSGKC----SITPF--TRQAAESSKVEDFIDPNLEGKFS 634
T RFT KSD+++FG++++++L+ I PF T A+ ++ P E
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRL-----PQPE---- 251
Query: 635 VSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
+L Q+ C P+ RP+ ++ E+ I+ +
Sbjct: 252 -YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATYKGIL----RDGSVVAVKCIAKTSCKSDEGEFLKGL 450
++ E + ++LG +FS IL R +VA+KCIAK + + EG +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISV 510
+L +KH N+ +L I S G +LI V G L + +E G + A+R+
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGH--LYLIMQLVSGGELFDRI-VEKGFYTERD-ASRL-- 121
Query: 511 IKGIAKGISYLHGKRPGLVHPNLSAEKVLIH---RRYNPLLSDSGLHKLLADDIVFSMLK 567
I + + YLH G+VH +L E +L + ++SD GL K+ V S
Sbjct: 122 IFQVLDAVKYLHDL--GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-- 177
Query: 568 ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
A GY+APE +++ D ++ G+I + +L C PF
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL---CGYPPF 218
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 118/273 (43%), Gaps = 34/273 (12%)
Query: 408 NLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGI 467
++G+ +F K R V I + +S+ F+ L+ L+ + H N+ L G
Sbjct: 15 EVVGRGAFGVVCKAKWRAKDVA----IKQIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 468 CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW--ATRISVIKGIAKGISYLHGKR 525
C + L+ ++ G+L L G+E + + A +S ++G++YLH +
Sbjct: 71 CLNP----VCLVMEYAEGGSLYNVLH---GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 526 PGLVHPNLSAEKVLIHRRYNP---LLSDSGLHKLLAD-----DIVFSMLKASAAMGYLAP 577
P K LIHR P LL G + D DI M + ++AP
Sbjct: 124 P----------KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAP 173
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637
E ++EK D++++G+I++++++ + PF + ++ + +
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRR---KPFDEIGGPAFRIMWAVHNGTRPPLIKNL 230
Query: 638 ASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ + C + PS RPS+E +++ ++ ++
Sbjct: 231 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATYKGIL----RDGSVVAVKCIAKTSCKSDEGEFLKGL 450
++ E + ++LG +FS IL R +VA+KCIAK + + EG +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISV 510
+L +KH N+ +L I S G +LI V G L + +E G + A+R+
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGH--LYLIMQLVSGGELFDRI-VEKGFYTERD-ASRL-- 121
Query: 511 IKGIAKGISYLHGKRPGLVHPNLSAEKVLIH---RRYNPLLSDSGLHKLLADDIVFSMLK 567
I + + YLH G+VH +L E +L + ++SD GL K+ V S
Sbjct: 122 IFQVLDAVKYLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-- 177
Query: 568 ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
A GY+APE +++ D ++ G+I + +L C PF
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL---CGYPPF 218
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 118/273 (43%), Gaps = 34/273 (12%)
Query: 408 NLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGI 467
++G+ +F K R V I + +S+ F+ L+ L+ + H N+ L G
Sbjct: 14 EVVGRGAFGVVCKAKWRAKDVA----IKQIESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 468 CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW--ATRISVIKGIAKGISYLHGKR 525
C + L+ ++ G+L L G+E + + A +S ++G++YLH +
Sbjct: 70 CLNP----VCLVMEYAEGGSLYNVLH---GAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 526 PGLVHPNLSAEKVLIHRRYNP---LLSDSGLHKLLAD-----DIVFSMLKASAAMGYLAP 577
P K LIHR P LL G + D DI M + ++AP
Sbjct: 123 P----------KALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAP 172
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSE 637
E ++EK D++++G+I++++++ + PF + ++ + +
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRR---KPFDEIGGPAFRIMWAVHNGTRPPLIKNL 229
Query: 638 ASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ + C + PS RPS+E +++ ++ ++
Sbjct: 230 PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 23/224 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATYKGIL----RDGSVVAVKCIAKTSCKSDEGEFLKGL 450
++ E + ++LG +FS IL R +VA+KCIAK + + EG +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 451 KILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISV 510
+L +KH N+ +L I S G +LI V G L + +E G + A+R+
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGH--LYLIMQLVSGGELFDRI-VEKGFYTERD-ASRL-- 121
Query: 511 IKGIAKGISYLHGKRPGLVHPNLSAEKVLIH---RRYNPLLSDSGLHKLLADDIVFSMLK 567
I + + YLH G+VH +L E +L + ++SD GL K+ V S
Sbjct: 122 IFQVLDAVKYLHD--LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-- 177
Query: 568 ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
A GY+APE +++ D ++ G+I + +L C PF
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL---CGYPPF 218
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 410 LGKSSFSATYKGI--LRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRG 466
LG +F + +G+ +R + VA+K + + + K+D E ++ +I+ L + + L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 467 ICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
+C ++ L+ + G L + L G + + + ++ ++ G+ YL K
Sbjct: 78 VCQAEA---LMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMGMKYLEEK-- 129
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVFSMLKASAA-MGYLAPEYTTTGR 584
VH +L+A VL+ R+ +SD GL K L ADD ++ A + + APE +
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 585 FTEKSDIYAFGMIVFQILS 603
F+ +SD++++G+ +++ LS
Sbjct: 190 FSSRSDVWSYGVTMWEALS 208
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VAVK + + + + IL +L HE++ +G C +G L+ ++VP
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 486 GNLLQHLDLEA-GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY 544
G+L +L + G ++L +A + I +G++YLH + +H NL+A VL+
Sbjct: 103 GSLRDYLPRHSIGLAQLLLFAQQ------ICEGMAYLHAQH--YIHRNLAARNVLLDNDR 154
Query: 545 NPLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQIL 602
+ D GL K + + + ++ + + + APE +F SD+++FG+ ++++L
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 603 S 603
+
Sbjct: 215 T 215
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 126/295 (42%), Gaps = 29/295 (9%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKGIL------RDGSVVAVKCIAKTSCKSDEGEF 446
L+E+ + F E LG+ F YKG L VA+K + + EF
Sbjct: 2 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKV----- 501
+ L+H N+ L G+ +I+ + +G+L + L + + V
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 502 -------LEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLH 554
LE + ++ IA G+ YL +VH +L+ VL++ + N +SD GL
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLF 175
Query: 555 KLLADDIVFSMLKASA-AMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTR 613
+ + + +L S + ++APE G+F+ SDI+++G++++++ S + P+
Sbjct: 176 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS--YGLQPYC- 232
Query: 614 QAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSS 668
+ V + I + + + + C +E PS RP +++ L +
Sbjct: 233 -GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 286
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%), Gaps = 33/223 (14%)
Query: 409 LLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASL---R 465
L+G+ + A YKG L D VAVK + + ++ E K + + ++H+N+A
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINE--KNIYRVPLMEHDNIARFIVGD 76
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK- 524
+ GR E L+ ++ PNG+L ++L L +W + + + +G++YLH +
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTEL 131
Query: 525 ------RPGLVHPNLSAEKVLIHRRYNPLLSDSGL-HKLLADDIVFSMLKASAAMG---- 573
+P + H +L++ VL+ ++SD GL +L + +V + +AA+
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 574 --YLAPEYTTTG---RFTEKS----DIYAFGMIVFQILSGKCS 607
Y+APE R E + D+YA G+I ++I +C+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM-RCT 233
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VAVK + + + + IL +L HE++ +G C +G L+ ++VP
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 486 GNLLQHLDLEA-GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY 544
G+L +L + G ++L +A + I +G++YLH + +H NL+A VL+
Sbjct: 103 GSLRDYLPRHSIGLAQLLLFAQQ------ICEGMAYLHSQH--YIHRNLAARNVLLDNDR 154
Query: 545 NPLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQIL 602
+ D GL K + + + ++ + + + APE +F SD+++FG+ ++++L
Sbjct: 155 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
Query: 603 S 603
+
Sbjct: 215 T 215
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 126/295 (42%), Gaps = 29/295 (9%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKGIL------RDGSVVAVKCIAKTSCKSDEGEF 446
L+E+ + F E LG+ F YKG L VA+K + + EF
Sbjct: 19 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 76
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKV----- 501
+ L+H N+ L G+ +I+ + +G+L + L + + V
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQ--PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 502 -------LEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLH 554
LE + ++ IA G+ YL +VH +L+ VL++ + N +SD GL
Sbjct: 135 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLF 192
Query: 555 KLLADDIVFSMLKASA-AMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTR 613
+ + + +L S + ++APE G+F+ SDI+++G++++++ S + P+
Sbjct: 193 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS--YGLQPYC- 249
Query: 614 QAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSS 668
+ V + I + + + + C +E PS RP +++ L +
Sbjct: 250 -GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 19/297 (6%)
Query: 388 ESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKT-----SCKSD 442
E LE+V +LG+ F + +G L+ ++K KT S + +
Sbjct: 20 EELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQRE 79
Query: 443 EGEFLKGLKILTSLKHENLASLRGICC---SKGRGECFLIYDFVPNGNLLQHL---DLEA 496
EFL + H N+ L G+C S+G + +I F+ G+L +L LE
Sbjct: 80 IEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLET 139
Query: 497 GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL-HK 555
G K + T + + IA G+ YL + +H +L+A ++ ++D GL K
Sbjct: 140 GP-KHIPLQTLLKFMVDIALGMEYLSNR--NFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
Query: 556 LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQA 615
+ + D A + ++A E +T KSD++AFG+ +++I + +TP+
Sbjct: 197 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR--GMTPYP--G 252
Query: 616 AESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
++ ++ D++ K L +I C P RP+ + +L ++ S
Sbjct: 253 VQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 131/272 (48%), Gaps = 42/272 (15%)
Query: 410 LGKSSFSATYKGIL----RDGSVVAVK--CIAKTSCKSDEGEFLKGLKILTSLKHENLAS 463
+G+ SF K IL DG +K I++ S K E E + + +L ++KH N+
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKERE-ESRREVAVLANMKHPNIVQ 87
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAG----SEKVLEWATRISVIKGIAKGIS 519
R + G +++ D+ G+L + ++ + G +++L+W +I + +
Sbjct: 88 YRE--SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL------ALK 139
Query: 520 YLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLA 576
++H ++ ++H ++ ++ + + + L D G+ ++L + A A +G YL+
Sbjct: 140 HVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL----ARACIGTPYYLS 193
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF--- 633
PE + KSDI+A G +++++ C++ + A E+ +++ + + G F
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYEL----CTL----KHAFEAGSMKNLVLKIISGSFPPV 245
Query: 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
S+ + +L + +P RPS+ +++++
Sbjct: 246 SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 133/275 (48%), Gaps = 33/275 (12%)
Query: 410 LGKSSF----SATYKGILRDGSV--VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLA 462
LG +F AT G+ ++ +V VAVK + T+ ++ + LKI++ L +HEN+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKG--------- 513
+L G C+ G G +I ++ G+LL L ++ +VLE ++
Sbjct: 114 NLLG-ACTHG-GPVLVITEYCCYGDLLNFLRRKS---RVLETDPAFAIANSTLSTRDLLH 168
Query: 514 ----IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKAS 569
+A+G+++L K +H +++A VL+ + + D GL + + +D + ++K +
Sbjct: 169 FSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY-IVKGN 225
Query: 570 AAM--GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDP 627
A + ++APE +T +SD++++G+++++I S + P+ +SK +
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS--LGLNPYPGILV-NSKFYKLVKD 282
Query: 628 NLEGKFSVSEASNLGQIALHCTHESPSHRPSIENV 662
+ N+ I C P+HRP+ + +
Sbjct: 283 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 17/231 (7%)
Query: 386 VLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSC 439
V S ++ +E E + + + LG+ SF Y+G RD + VAVK + +++
Sbjct: 1 VFPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 440 KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEA 496
+ EFL ++ ++ L G+ SKG+ ++ + + +G+L L+ L EA
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVV-SKGQ-PTLVVMELMAHGDLKSYLRSLRPEA 118
Query: 497 GSEKVLEWAT---RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553
+ T I + IA G++YL+ K+ VH NL+A ++ + + D G+
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRNLAARNCMVAHDFTVKIGDFGM 176
Query: 554 HK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + D K + ++APE G FT SD+++FG+++++I S
Sbjct: 177 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 17/231 (7%)
Query: 386 VLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSC 439
V S ++ +E E + + + LG+ SF Y+G RD + VAVK + +++
Sbjct: 2 VFPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 61
Query: 440 KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEA 496
+ EFL ++ ++ L G+ SKG+ ++ + + +G+L L+ L EA
Sbjct: 62 LRERIEFLNEASVMKGFTCHHVVRLLGVV-SKGQ-PTLVVMELMAHGDLKSYLRSLRPEA 119
Query: 497 GSEKVLEWAT---RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553
+ T I + IA G++YL+ K+ VH NL+A ++ + + D G+
Sbjct: 120 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRNLAARNCMVAHDFTVKIGDFGM 177
Query: 554 HK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + D K + ++APE G FT SD+++FG+++++I S
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 133/275 (48%), Gaps = 33/275 (12%)
Query: 410 LGKSSF----SATYKGILRDGSV--VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLA 462
LG +F AT G+ ++ +V VAVK + T+ ++ + LKI++ L +HEN+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKG--------- 513
+L G C+ G G +I ++ G+LL L ++ +VLE ++
Sbjct: 114 NLLG-ACTHG-GPVLVITEYCCYGDLLNFLRRKS---RVLETDPAFAIANSTASTRDLLH 168
Query: 514 ----IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKAS 569
+A+G+++L K +H +++A VL+ + + D GL + + +D + ++K +
Sbjct: 169 FSSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY-IVKGN 225
Query: 570 AAM--GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDP 627
A + ++APE +T +SD++++G+++++I S + P+ +SK +
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS--LGLNPYPGILV-NSKFYKLVKD 282
Query: 628 NLEGKFSVSEASNLGQIALHCTHESPSHRPSIENV 662
+ N+ I C P+HRP+ + +
Sbjct: 283 GYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 127/259 (49%), Gaps = 23/259 (8%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFV 483
+D +VAVK + K + +S +F + ++LT L+H+++ G+C ++GR ++++++
Sbjct: 69 QDKMLVAVKAL-KEASESARQDFQREAELLTMLQHQHIVRFFGVC-TEGR-PLLMVFEYM 125
Query: 484 PNGNLLQHL-------DLEAGSEKV----LEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+G+L + L L AG E V L ++V +A G+ YL G VH +
Sbjct: 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRD 183
Query: 533 LSAEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDI 591
L+ L+ + + D G+ + + + D + + ++ PE +FT +SD+
Sbjct: 184 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 243
Query: 592 YAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTH 650
++FG+++++I + GK P+ + + +++ D I E + + + I C
Sbjct: 244 WSFGVVLWEIFTYGK---QPWYQLS--NTEAIDCITQGRELERPRACPPEVYAIMRGCWQ 298
Query: 651 ESPSHRPSIENVMQELSSI 669
P R SI++V L ++
Sbjct: 299 REPQQRHSIKDVHARLQAL 317
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VAVK + + + + ++IL +L HE++ +G C +G L+ ++VP
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 486 GNLLQHLDLE-AGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY 544
G+L +L G ++L +A + I +G++YLH + +H L+A VL+
Sbjct: 97 GSLRDYLPRHCVGLAQLLLFAQQ------ICEGMAYLHAQH--YIHRALAARNVLLDNDR 148
Query: 545 NPLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQIL 602
+ D GL K + + + ++ + + + APE +F SD+++FG+ ++++L
Sbjct: 149 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
Query: 603 S 603
+
Sbjct: 209 T 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 92/181 (50%), Gaps = 11/181 (6%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VAVK + + + + ++IL +L HE++ +G C +G L+ ++VP
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 486 GNLLQHLDLE-AGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY 544
G+L +L G ++L +A + I +G++YLH + +H L+A VL+
Sbjct: 98 GSLRDYLPRHCVGLAQLLLFAQQ------ICEGMAYLHAQH--YIHRALAARNVLLDNDR 149
Query: 545 NPLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQIL 602
+ D GL K + + + ++ + + + APE +F SD+++FG+ ++++L
Sbjct: 150 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
Query: 603 S 603
+
Sbjct: 210 T 210
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 386 VLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSC 439
V S +F +E E + + + LG+ SF Y+G RD + VAVK + +++
Sbjct: 1 VFPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 440 KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEA 496
+ EFL ++ ++ L G+ SKG+ ++ + + +G+L L+ L EA
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVV-SKGQ-PTLVVMELMAHGDLKSYLRSLRPEA 118
Query: 497 GSEKVLEWAT---RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553
+ T I + IA G++YL+ K+ VH +L+A ++ + + D G+
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 554 HKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + D K + ++APE G FT SD+++FG+++++I S
Sbjct: 177 TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 110/258 (42%), Gaps = 33/258 (12%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICC 469
LG F + + VAVK + S + FL ++ +L+H+ L L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA--FLAEANVMKTLQHDKLVKLHAVVT 247
Query: 470 SKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+ ++I +F+ G+LL L + GS++ L I IA+G++++ + +
Sbjct: 248 KE---PIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR--NYI 300
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H +L A +L+ ++D GL ++ A + + APE G FT KS
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIKS 350
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN----LGQI 644
D+++FG+++ +I++ G+ + + LE + + N L I
Sbjct: 351 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA---------LERGYRMPRPENCPEELYNI 401
Query: 645 ALHCTHESPSHRPSIENV 662
+ C P RP+ E +
Sbjct: 402 MMRCWKNRPEERPTFEYI 419
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 40/283 (14%)
Query: 410 LGKSSF----SATYKGILRDGSV--VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLA 462
LG +F AT G+ ++ +V VAVK + T+ ++ + LKI++ L +HEN+
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLL---------------------QHLDLEAGSEKV 501
+L G C G +I ++ G+LL + LD E G +
Sbjct: 99 NLLGACTHGG--PVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG--RP 154
Query: 502 LEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDI 561
LE + +A+G+++L K +H +++A VL+ + + D GL + + +D
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 212
Query: 562 VFSMLKASAAM--GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
+ ++K +A + ++APE +T +SD++++G+++++I S + P+ +S
Sbjct: 213 NY-IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS--LGLNPYPGILV-NS 268
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENV 662
K + + N+ I C P+HRP+ + +
Sbjct: 269 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 127/259 (49%), Gaps = 23/259 (8%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFV 483
+D +VAVK + K + +S +F + ++LT L+H+++ G+C ++GR ++++++
Sbjct: 40 QDKMLVAVKAL-KEASESARQDFQREAELLTMLQHQHIVRFFGVC-TEGR-PLLMVFEYM 96
Query: 484 PNGNLLQHL-------DLEAGSEKV----LEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+G+L + L L AG E V L ++V +A G+ YL G VH +
Sbjct: 97 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRD 154
Query: 533 LSAEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDI 591
L+ L+ + + D G+ + + + D + + ++ PE +FT +SD+
Sbjct: 155 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 214
Query: 592 YAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTH 650
++FG+++++I + GK P+ + + +++ D I E + + + I C
Sbjct: 215 WSFGVVLWEIFTYGK---QPWYQLS--NTEAIDCITQGRELERPRACPPEVYAIMRGCWQ 269
Query: 651 ESPSHRPSIENVMQELSSI 669
P R SI++V L ++
Sbjct: 270 REPQQRHSIKDVHARLQAL 288
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 111/231 (48%), Gaps = 17/231 (7%)
Query: 386 VLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSC 439
V S +F +E E + + + LG+ SF Y+G RD + VAVK + +++
Sbjct: 1 VFPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 440 KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEA 496
+ EFL ++ ++ L G+ SKG+ ++ + + +G+L L+ L EA
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVV-SKGQ-PTLVVMELMAHGDLKSYLRSLRPEA 118
Query: 497 GSEKVLEWAT---RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553
+ T I + IA G++YL+ K+ VH +L+A ++ + + D G+
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 554 HK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + D K + ++APE G FT SD+++FG+++++I S
Sbjct: 177 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 127/259 (49%), Gaps = 23/259 (8%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFV 483
+D +VAVK + K + +S +F + ++LT L+H+++ G+C ++GR ++++++
Sbjct: 46 QDKMLVAVKAL-KEASESARQDFQREAELLTMLQHQHIVRFFGVC-TEGR-PLLMVFEYM 102
Query: 484 PNGNLLQHL-------DLEAGSEKV----LEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+G+L + L L AG E V L ++V +A G+ YL G VH +
Sbjct: 103 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH--FVHRD 160
Query: 533 LSAEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDI 591
L+ L+ + + D G+ + + + D + + ++ PE +FT +SD+
Sbjct: 161 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDV 220
Query: 592 YAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTH 650
++FG+++++I + GK P+ + + +++ D I E + + + I C
Sbjct: 221 WSFGVVLWEIFTYGK---QPWYQLS--NTEAIDCITQGRELERPRACPPEVYAIMRGCWQ 275
Query: 651 ESPSHRPSIENVMQELSSI 669
P R SI++V L ++
Sbjct: 276 REPQQRHSIKDVHARLQAL 294
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 113/271 (41%), Gaps = 24/271 (8%)
Query: 399 RATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK 457
R T F E +LG +FS + R G + A+KCI K+ D + +L +K
Sbjct: 8 RKTFIFME--VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSS-LENEIAVLKKIK 64
Query: 458 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKG 517
HEN+ +L I + +L+ V G L + LE G V VI+ +
Sbjct: 65 HENIVTLEDI--YESTTHYYLVMQLVSGGELFDRI-LERG---VYTEKDASLVIQQVLSA 118
Query: 518 ISYLHGKRPGLVHPNLSAEKVLI---HRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGY 574
+ YLH G+VH +L E +L +++D GL K+ + I M A GY
Sbjct: 119 VKYLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI---MSTACGTPGY 173
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID--PNLEGK 632
+APE +++ D ++ G+I + +L C PF + ES E + E
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILL---CGYPPFYEE-TESKLFEKIKEGYYEFESP 229
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVM 663
F + + H + P+ R + E +
Sbjct: 230 FWDDISESAKDFICHLLEKDPNERYTCEKAL 260
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 130/274 (47%), Gaps = 29/274 (10%)
Query: 410 LGKSSF----SATYKGILRDGSV--VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLA 462
LG +F AT G+ ++ +V VAVK + T+ ++ + LKI++ L +HEN+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEA------------GSEKVLEWATRISV 510
+L G C+ G G +I ++ G+LL L + E+ L +
Sbjct: 114 NLLG-ACTHG-GPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 511 IKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA 570
+A+G+++L K +H +++A VL+ + + D GL + + +D + ++K +A
Sbjct: 172 SSQVAQGMAFLASK--NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY-IVKGNA 228
Query: 571 AM--GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPN 628
+ ++APE +T +SD++++G+++++I S + P+ +SK +
Sbjct: 229 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS--LGLNPYPGILV-NSKFYKLVKDG 285
Query: 629 LEGKFSVSEASNLGQIALHCTHESPSHRPSIENV 662
+ N+ I C P+HRP+ + +
Sbjct: 286 YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 408 NLLGKSSFSATYKGILRDGS----VVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLAS 463
+LG+ F Y+G+ + VAVK K ++ +F+ I+ +L H ++
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
L GI ++I + P G L +L+ S KVL T + I K ++YL
Sbjct: 74 LIGII---EEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLES 127
Query: 524 KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG 583
VH +++ +L+ L D GL + + D+ + + +++PE
Sbjct: 128 I--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 185
Query: 584 RFTEKSDIYAFGMIVFQILS 603
RFT SD++ F + +++ILS
Sbjct: 186 RFTTASDVWMFAVCMWEILS 205
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 386 VLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSC 439
V S +F +E E + + + LG+ SF Y+G RD + VAVK + +++
Sbjct: 1 VFPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 440 KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEA 496
+ EFL ++ ++ L G+ SKG+ ++ + + +G+L L+ L EA
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVV-SKGQ-PTLVVMELMAHGDLKSYLRSLRPEA 118
Query: 497 GSEKVLEWAT---RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553
+ T I + IA G++YL+ K+ VH +L+A ++ + + D G+
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 554 HKLLADDIVFSML-KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + + K + ++APE G FT SD+++FG+++++I S
Sbjct: 177 TRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 408 NLLGKSSFSATYKGILRDGS----VVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLAS 463
+LG+ F Y+G+ + VAVK K ++ +F+ I+ +L H ++
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
L GI ++I + P G L +L+ S KVL T + I K ++YL
Sbjct: 90 LIGII---EEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLES 143
Query: 524 KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG 583
VH +++ +L+ L D GL + + D+ + + +++PE
Sbjct: 144 I--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 584 RFTEKSDIYAFGMIVFQILS 603
RFT SD++ F + +++ILS
Sbjct: 202 RFTTASDVWMFAVCMWEILS 221
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 112/231 (48%), Gaps = 17/231 (7%)
Query: 386 VLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSC 439
V S ++ +E E + + + LG+ SF Y+G RD + VAVK + +++
Sbjct: 1 VFPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 440 KSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEA 496
+ EFL ++ ++ L G+ SKG+ ++ + + +G+L L+ L EA
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVV-SKGQ-PTLVVMELMAHGDLKSYLRSLRPEA 118
Query: 497 GSEKVLEWAT---RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553
+ T I + IA G++YL+ K+ VH +L+A ++ + + D G+
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGM 176
Query: 554 HKLLAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + D K + ++APE G FT SD+++FG+++++I S
Sbjct: 177 TRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 408 NLLGKSSFSATYKGILRDGS----VVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLAS 463
+LG+ F Y+G+ + VAVK K ++ +F+ I+ +L H ++
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
L GI ++I + P G L +L+ S KVL T + I K ++YL
Sbjct: 78 LIGII---EEEPTWIIMELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLES 131
Query: 524 KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG 583
VH +++ +L+ L D GL + + D+ + + +++PE
Sbjct: 132 I--NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 584 RFTEKSDIYAFGMIVFQILS 603
RFT SD++ F + +++ILS
Sbjct: 190 RFTTASDVWMFAVCMWEILS 209
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 111/228 (48%), Gaps = 17/228 (7%)
Query: 389 SFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSCKSD 442
S +F +E E + + + LG+ SF Y+G RD + VAVK + +++ +
Sbjct: 1 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 60
Query: 443 EGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSE 499
EFL ++ ++ L G+ SKG+ ++ + + +G+L L+ L EA +
Sbjct: 61 RIEFLNEASVMKGFTCHHVVRLLGVV-SKGQ-PTLVVMELMAHGDLKSYLRSLRPEAENN 118
Query: 500 KVLEWAT---RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL 556
T I + IA G++YL+ K+ VH +L+A ++ + + D G+ +
Sbjct: 119 PGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRD 176
Query: 557 LAD-DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + D K + ++APE G FT SD+++FG+++++I S
Sbjct: 177 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 136/290 (46%), Gaps = 29/290 (10%)
Query: 391 MFNLEEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEG 444
+F +E E A + + + LG+ SF Y KG+++D + VA+K + + + +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKV 501
EFL ++ ++ L G+ S+G+ +I + + G+L L+ L E + V
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVV-SQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPV 122
Query: 502 L---EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LL 557
L + I + IA G++YL+ + VH +L+A ++ + + D G+ + +
Sbjct: 123 LAPPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 558 ADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE 617
D K + +++PE G FT SD+++FG+++++I + + P+ Q
Sbjct: 181 ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLS 236
Query: 618 SSKVEDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
+ +V F+ +EG + + N L ++ C +P RPS ++
Sbjct: 237 NEQVLRFV---MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 29/286 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEGEFLK 448
+E E A + + + LG+ SF Y KG+++D + VA+K + + + + EFL
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 449 GLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVL--- 502
++ ++ L G+ S+G+ +I + + G+L L+ L E + VL
Sbjct: 65 EASVMKEFNCHHVVRLLGVV-SQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDI 561
+ I + IA G++YL+ + VH +L+A ++ + + D G+ + + D
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
K + +++PE G FT SD+++FG+++++I + + P+ Q + +V
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLSNEQV 236
Query: 622 EDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
F+ +EG + + N L ++ C +P RPS ++
Sbjct: 237 LRFV---MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 135/286 (47%), Gaps = 29/286 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEGEFLK 448
+E E A + + + LG+ SF Y KG+++D + VA+K + + + + EFL
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 449 GLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVL--- 502
++ ++ L G+ S+G+ +I + + G+L L+ L E + VL
Sbjct: 63 EASVMKEFNCHHVVRLLGVV-SQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 120
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DI 561
+ I + IA G++YL+ + VH +L+A ++ + + D G+ + + + D
Sbjct: 121 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 178
Query: 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
K + +++PE G FT SD+++FG+++++I + + P+ Q + +V
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLSNEQV 234
Query: 622 EDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
F+ +EG + + N L ++ C +P RPS ++
Sbjct: 235 LRFV---MEGGL-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VAVK + + + + + IL +L HE++ +G C G L+ ++VP
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 486 GNLLQHLDLEA-GSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY 544
G+L +L + G ++L +A + I +G++YLH + +H +L+A VL+
Sbjct: 120 GSLRDYLPRHSIGLAQLLLFAQQ------ICEGMAYLHAQH--YIHRDLAARNVLLDNDR 171
Query: 545 NPLLSDSGLHKLLADDIVFSMLK--ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQIL 602
+ D GL K + + ++ + + + APE +F SD+++FG+ ++++L
Sbjct: 172 LVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
Query: 603 S 603
+
Sbjct: 232 T 232
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 135/286 (47%), Gaps = 29/286 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEGEFLK 448
+E E A + + + LG+ SF Y KG+++D + VA+K + + + + EFL
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 449 GLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVL--- 502
++ ++ L G+ S+G+ +I + + G+L L+ L E + VL
Sbjct: 72 EASVMKEFNCHHVVRLLGVV-SQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD-DI 561
+ I + IA G++YL+ + VH +L+A ++ + + D G+ + + + D
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDX 187
Query: 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
K + +++PE G FT SD+++FG+++++I + + P+ Q + +V
Sbjct: 188 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLSNEQV 243
Query: 622 EDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
F+ +EG + + N L ++ C +P RPS ++
Sbjct: 244 LRFV---MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 29/286 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEGEFLK 448
+E E A + + + LG+ SF Y KG+++D + VA+K + + + + EFL
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 449 GLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVL--- 502
++ ++ L G+ S+G+ +I + + G+L L+ L E + VL
Sbjct: 71 EASVMKEFNCHHVVRLLGVV-SQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDI 561
+ I + IA G++YL+ + VH +L+A ++ + + D G+ + + D
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
K + +++PE G FT SD+++FG+++++I + + P+ Q + +V
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLSNEQV 242
Query: 622 EDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
F+ +EG + + N L ++ C +P RPS ++
Sbjct: 243 LRFV---MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 29/286 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEGEFLK 448
+E E A + + + LG+ SF Y KG+++D + VA+K + + + + EFL
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 449 GLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVL--- 502
++ ++ L G+ S+G+ +I + + G+L L+ L E + VL
Sbjct: 100 EASVMKEFNCHHVVRLLGVV-SQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 157
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDI 561
+ I + IA G++YL+ + VH +L+A ++ + + D G+ + + D
Sbjct: 158 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 215
Query: 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
K + +++PE G FT SD+++FG+++++I + + P+ Q + +V
Sbjct: 216 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLSNEQV 271
Query: 622 EDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
F+ +EG + + N L ++ C +P RPS ++
Sbjct: 272 LRFV---MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 29/286 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEGEFLK 448
+E E A + + + LG+ SF Y KG+++D + VA+K + + + + EFL
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 449 GLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVL--- 502
++ ++ L G+ S+G+ +I + + G+L L+ L E + VL
Sbjct: 72 EASVMKEFNCHHVVRLLGVV-SQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 129
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDI 561
+ I + IA G++YL+ + VH +L+A ++ + + D G+ + + D
Sbjct: 130 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 187
Query: 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
K + +++PE G FT SD+++FG+++++I + + P+ Q + +V
Sbjct: 188 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLSNEQV 243
Query: 622 EDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
F+ +EG + + N L ++ C +P RPS ++
Sbjct: 244 LRFV---MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 29/286 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEGEFLK 448
+E E A + + + LG+ SF Y KG+++D + VA+K + + + + EFL
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 449 GLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVL--- 502
++ ++ L G+ S+G+ +I + + G+L L+ L E + VL
Sbjct: 78 EASVMKEFNCHHVVRLLGVV-SQGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 135
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDI 561
+ I + IA G++YL+ + VH +L+A ++ + + D G+ + + D
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
K + +++PE G FT SD+++FG+++++I + + P+ Q + +V
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLSNEQV 249
Query: 622 EDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
F+ +EG + + N L ++ C +P RPS ++
Sbjct: 250 LRFV---MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 134/286 (46%), Gaps = 29/286 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEGEFLK 448
+E E A + + + LG+ SF Y KG+++D + VA+K + + + + EFL
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 449 GLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVL--- 502
++ ++ L G+ S+G+ +I + + G+L L+ L E + VL
Sbjct: 71 EASVMKEFNCHHVVRLLGVV-SQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 128
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDI 561
+ I + IA G++YL+ + VH +L+A ++ + + D G+ + + D
Sbjct: 129 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 186
Query: 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
K + +++PE G FT SD+++FG+++++I + + P+ Q + +V
Sbjct: 187 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLSNEQV 242
Query: 622 EDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
F+ +EG + + N L ++ C +P RPS ++
Sbjct: 243 LRFV---MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 410 LGKSSFSATYKGILRDGS----VVAVKCIAKTSCKSDEG--EFLKGLKILTSLKHENLAS 463
LG SF +G S VAVKC+ E +F++ + + SL H NL
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
L G+ + ++ + P G+LL L G +L +R +V +A+G+ YL
Sbjct: 80 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAV--QVAEGMGYLES 133
Query: 524 KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA--DDIVFSMLKASAAMGYLAPEYTT 581
KR +H +L+A +L+ R + D GL + L DD + APE
Sbjct: 134 KR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 582 TGRFTEKSDIYAFGMIVFQILS 603
T F+ SD + FG+ ++++ +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 410 LGKSSFSATYKGILRDGS----VVAVKCIAKTSCKSDEG--EFLKGLKILTSLKHENLAS 463
LG SF +G S VAVKC+ E +F++ + + SL H NL
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
L G+ + ++ + P G+LL L G +L +R +V +A+G+ YL
Sbjct: 86 LYGVVLTP---PMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAV--QVAEGMGYLES 139
Query: 524 KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA--DDIVFSMLKASAAMGYLAPEYTT 581
KR +H +L+A +L+ R + D GL + L DD + APE
Sbjct: 140 KR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 582 TGRFTEKSDIYAFGMIVFQILS 603
T F+ SD + FG+ ++++ +
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFT 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 410 LGKSSFSATYKGILRDGS----VVAVKCIAKTSCKSDEG--EFLKGLKILTSLKHENLAS 463
LG SF +G S VAVKC+ E +F++ + + SL H NL
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
L G+ + ++ + P G+LL L G +L +R +V +A+G+ YL
Sbjct: 86 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAV--QVAEGMGYLES 139
Query: 524 KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA--DDIVFSMLKASAAMGYLAPEYTT 581
KR +H +L+A +L+ R + D GL + L DD + APE
Sbjct: 140 KR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 582 TGRFTEKSDIYAFGMIVFQILS 603
T F+ SD + FG+ ++++ +
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFT 219
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 101/207 (48%), Gaps = 17/207 (8%)
Query: 410 LGKSSFSATYKGILRD------GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLAS 463
LG+ SF Y+G RD + VAVK + +++ + EFL ++ ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 464 LRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLEWAT---RISVIKGIAKG 517
L G+ SKG+ ++ + + +G+L L+ L EA + T I + IA G
Sbjct: 84 LLGVV-SKGQ-PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLA 576
++YL+ K+ VH +L+A ++ + + D G+ + + D K + ++A
Sbjct: 142 MAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILS 603
PE G FT SD+++FG+++++I S
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 410 LGKSSFSATYKGILRDGS----VVAVKCIAKTSCKSDEG--EFLKGLKILTSLKHENLAS 463
LG SF +G S VAVKC+ E +F++ + + SL H NL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
L G+ + ++ + P G+LL L G +L +R +V +A+G+ YL
Sbjct: 76 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAV--QVAEGMGYLES 129
Query: 524 KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA--DDIVFSMLKASAAMGYLAPEYTT 581
KR +H +L+A +L+ R + D GL + L DD + APE
Sbjct: 130 KR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 582 TGRFTEKSDIYAFGMIVFQILS 603
T F+ SD + FG+ ++++ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 410 LGKSSFSATYKGILRDGS----VVAVKCIAKTSCKSDEG--EFLKGLKILTSLKHENLAS 463
LG SF +G S VAVKC+ E +F++ + + SL H NL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
L G+ + ++ + P G+LL L G +L +R +V +A+G+ YL
Sbjct: 76 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAV--QVAEGMGYLES 129
Query: 524 KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA--DDIVFSMLKASAAMGYLAPEYTT 581
KR +H +L+A +L+ R + D GL + L DD + APE
Sbjct: 130 KR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 582 TGRFTEKSDIYAFGMIVFQILS 603
T F+ SD + FG+ ++++ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 410 LGKSSFSATYKGILRDGS----VVAVKCIAKTSCKSDEG--EFLKGLKILTSLKHENLAS 463
LG SF +G S VAVKC+ E +F++ + + SL H NL
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
L G+ + ++ + P G+LL L G +L +R +V +A+G+ YL
Sbjct: 80 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAV--QVAEGMGYLES 133
Query: 524 KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA--DDIVFSMLKASAAMGYLAPEYTT 581
KR +H +L+A +L+ R + D GL + L DD + APE
Sbjct: 134 KR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 582 TGRFTEKSDIYAFGMIVFQILS 603
T F+ SD + FG+ ++++ +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 133/286 (46%), Gaps = 29/286 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEGEFLK 448
+E E A + + + LG+ SF Y KG+++D + VA+K + + + + EFL
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 449 GLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVL--- 502
++ ++ L G+ S+G+ +I + + G+L L+ L + VL
Sbjct: 78 EASVMKEFNCHHVVRLLGVV-SQGQ-PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDI 561
+ I + IA G++YL+ + VH +L+A ++ + + D G+ + + D
Sbjct: 136 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 193
Query: 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
K + +++PE G FT SD+++FG+++++I + + P+ Q + +V
Sbjct: 194 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLSNEQV 249
Query: 622 EDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
F+ +EG + + N L ++ C +P RPS ++
Sbjct: 250 LRFV---MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 133/286 (46%), Gaps = 29/286 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEGEFLK 448
+E E A + + + LG+ SF Y KG+++D + VA+K + + + + EFL
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 449 GLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVL--- 502
++ ++ L G+ S+G+ +I + + G+L L+ L E + VL
Sbjct: 65 EASVMKEFNCHHVVRLLGVV-SQGQ-PTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPP 122
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDI 561
+ I + IA G++YL+ + VH +L+A + + + D G+ + + D
Sbjct: 123 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
Query: 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
K + +++PE G FT SD+++FG+++++I + + P+ Q + +V
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLSNEQV 236
Query: 622 EDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
F+ +EG + + N L ++ C +P RPS ++
Sbjct: 237 LRFV---MEGGL-LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 16/202 (7%)
Query: 410 LGKSSFSATYKGILRDGS----VVAVKCIAKTSCKSDEG--EFLKGLKILTSLKHENLAS 463
LG SF +G S VAVKC+ E +F++ + + SL H NL
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 464 LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
L G+ + ++ + P G+LL L G +L +R +V +A+G+ YL
Sbjct: 76 LYGVVLTPPMK---MVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAV--QVAEGMGYLES 129
Query: 524 KRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA--DDIVFSMLKASAAMGYLAPEYTT 581
KR +H +L+A +L+ R + D GL + L DD + APE
Sbjct: 130 KR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 582 TGRFTEKSDIYAFGMIVFQILS 603
T F+ SD + FG+ ++++ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 133/286 (46%), Gaps = 29/286 (10%)
Query: 395 EEVERATQCFSEANLLGKSSFSATY----KGILRDG--SVVAVKCIAKTSCKSDEGEFLK 448
+E E A + + + LG+ SF Y KG+++D + VA+K + + + + EFL
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 449 GLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVL--- 502
++ ++ L G+ S+G+ +I + + G+L L+ L + VL
Sbjct: 68 EASVMKEFNCHHVVRLLGVV-SQGQ-PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 125
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDI 561
+ I + IA G++YL+ + VH +L+A ++ + + D G+ + + D
Sbjct: 126 SLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 183
Query: 562 VFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
K + +++PE G FT SD+++FG+++++I + + P+ Q + +V
Sbjct: 184 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--LAEQPY--QGLSNEQV 239
Query: 622 EDFIDPNLEGKFSVSEASN----LGQIALHCTHESPSHRPSIENVM 663
F+ +EG + + N L ++ C +P RPS ++
Sbjct: 240 LRFV---MEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 118/271 (43%), Gaps = 27/271 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL SE E I + + A+G+ YLH K +
Sbjct: 78 T---KPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAK--SI 129
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADDIVFSMLKASAAMGYLAPE---YTTT 582
+H +L + + +H + D GL + + F L S ++ ++APE +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDS 187
Query: 583 GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF----IDPNLEGKFSVSEA 638
++ +SD+YAFG++++++++G+ P++ +E + P+L K +
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQL---PYSNINNRDQIIEMVGRGSLSPDL-SKVRSNCP 243
Query: 639 SNLGQIALHCTHESPSHRPSIENVMQELSSI 669
+ ++ C + RPS ++ E+ +
Sbjct: 244 KRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 22/250 (8%)
Query: 425 DGSVVAVKCIAKTSCKSDEGEFL-KGLKILTSLKHENLASLRGICCSKGRGECFLIYDFV 483
DG ++ K + S E + L + +L LKH N+ + +++ ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 484 PNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG---LVHPNLSAEKVLI 540
G+L + + L+ + V+ + + H + G ++H +L V +
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 541 HRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMI 597
+ N L D GL ++L D F A A +G Y++PE + EKSDI++ G +
Sbjct: 150 DGKQNVKLGDFGLARILNHDTSF----AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 598 VFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS---VSEASNLGQIALHCTHESPS 654
++++ + T F+ Q + K+ EGKF + L +I +
Sbjct: 206 LYELCALMPPFTAFS-QKELAGKIR-------EGKFRRIPYRYSDELNEIITRMLNLKDY 257
Query: 655 HRPSIENVMQ 664
HRPS+E +++
Sbjct: 258 HRPSVEEILE 267
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 117/271 (43%), Gaps = 27/271 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL SE E I + + A+G+ YLH K +
Sbjct: 90 T---KPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAK--SI 141
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYLAPE---YTTT 582
+H +L + + +H + D GL + F L S ++ ++APE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRMQDS 199
Query: 583 GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF----IDPNLEGKFSVSEA 638
++ +SD+YAFG++++++++G+ P++ +E + P+L K +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQL---PYSNINNRDQIIEMVGRGSLSPDL-SKVRSNCP 255
Query: 639 SNLGQIALHCTHESPSHRPSIENVMQELSSI 669
+ ++ C + RPS ++ E+ +
Sbjct: 256 KRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 117/271 (43%), Gaps = 27/271 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL SE E I + + A+G+ YLH K +
Sbjct: 90 TAP---QLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAK--SI 141
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYLAPE---YTTT 582
+H +L + + +H + D GL + F L S ++ ++APE +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRMQDS 199
Query: 583 GRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF----IDPNLEGKFSVSEA 638
++ +SD+YAFG++++++++G+ P++ +E + P+L K +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQL---PYSNINNRDQIIEMVGRGSLSPDL-SKVRSNCP 255
Query: 639 SNLGQIALHCTHESPSHRPSIENVMQELSSI 669
+ ++ C + RPS ++ E+ +
Sbjct: 256 KRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 120/280 (42%), Gaps = 38/280 (13%)
Query: 404 FSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLA 462
F E L+G F +K R DG +K + + K++ + +K L L H N+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-----REVKALAKLDHVNIV 67
Query: 463 SLRGIC-------------CSKGRGEC-FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRI 508
G S+ + +C F+ +F G L Q ++ G + L+ +
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLAL 125
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKA 568
+ + I KG+ Y+H K+ L++ +L + + + D GL L +D ++
Sbjct: 126 ELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND--GKRXRS 181
Query: 569 SAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSK-VEDFIDP 627
+ Y++PE ++ + ++ D+YA G+I+ ++L C A E+SK D D
Sbjct: 182 KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV-CDT------AFETSKFFTDLRDG 234
Query: 628 NLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELS 667
+ F E + L ++ + P RP+ +++ L+
Sbjct: 235 IISDIFDKKEKTLLQKLL----SKKPEDRPNTSEILRTLT 270
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 402 QCFSEANLLGKSSFSATYKGIL-RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN 460
+ F++ +GK SF +KGI R VVA+K I + + + + + +L+
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520
+ G + ++I +++ G+ L L E G + AT +++ I KG+ Y
Sbjct: 87 VTKYYGSYLKDTK--LWIIMEYLGGGSALDLL--EPGPLDETQIAT---ILREILKGLDY 139
Query: 521 LHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAP 577
LH ++ +H ++ A VL+ L+D G+ L D + +K + +G ++AP
Sbjct: 140 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----TQIKRNTFVGTPFWMAP 193
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI----DPNLEGKF 633
E + K+DI++ G+ ++ G+ KV I P LEG +
Sbjct: 194 EVIKQSAYDSKADIWSLGITAIELARGEPP-----HSELHPMKVLFLIPKNNPPTLEGNY 248
Query: 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQ 664
S L + C ++ PS RP+ + +++
Sbjct: 249 S----KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 22/250 (8%)
Query: 425 DGSVVAVKCIAKTSCKSDEGEFL-KGLKILTSLKHENLASLRGICCSKGRGECFLIYDFV 483
DG ++ K + S E + L + +L LKH N+ + +++ ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 484 PNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG---LVHPNLSAEKVLI 540
G+L + + L+ + V+ + + H + G ++H +L V +
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 541 HRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMI 597
+ N L D GL ++L D F A +G Y++PE + EKSDI++ G +
Sbjct: 150 DGKQNVKLGDFGLARILNHDTSF----AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 598 VFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS---VSEASNLGQIALHCTHESPS 654
++++ + T F+ Q + K+ EGKF + L +I +
Sbjct: 206 LYELCALMPPFTAFS-QKELAGKIR-------EGKFRRIPYRYSDELNEIITRMLNLKDY 257
Query: 655 HRPSIENVMQ 664
HRPS+E +++
Sbjct: 258 HRPSVEEILE 267
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 108/241 (44%), Gaps = 19/241 (7%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VA+K + K + SD ++ L +L+H+++ L + + + F++ ++ P
Sbjct: 35 GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANK--IFMVLEYCPG 92
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G L ++ +++ E TR+ V + I ++Y+H + G H +L E +L +
Sbjct: 93 GELFDYI---ISQDRLSEEETRV-VFRQIVSAVAYVHSQ--GYAHRDLKPENLLFDEYHK 146
Query: 546 PLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFT-EKSDIYAFGMIVFQILSG 604
L D GL + + + ++ Y APE + ++D+++ G++++ ++
Sbjct: 147 LKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLM-- 204
Query: 605 KCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIAL--HCTHESPSHRPSIENV 662
C PF + V + GK+ V + + I L P R S++N+
Sbjct: 205 -CGFLPF-----DDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNL 258
Query: 663 M 663
+
Sbjct: 259 L 259
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 397 VERATQCFSE----ANLLGKSSFSATYKGILRD---GSVVAVKCIAKTSCK--SDEGEFL 447
V+ +T FS+ +LGK SF + +D G AVK I+K K +D+ L
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 448 KGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATR 507
+ +++L L H N+ L KG +L+ + G L E S K
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGY--FYLVGEVYTGGELFD----EIISRKRFSEVDA 128
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR---YNPLLSDSGLHKLLADDIVFS 564
+I+ + GI+Y+H + +VH +L E +L+ + N + D GL +
Sbjct: 129 ARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLS---------T 177
Query: 565 MLKASAAMG-------YLAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
+AS M Y+APE G + EK D+++ G+I++ +LSG
Sbjct: 178 HFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 397 VERATQCFSE----ANLLGKSSFSATYKGILRD---GSVVAVKCIAKTSCK--SDEGEFL 447
V+ +T FS+ +LGK SF + +D G AVK I+K K +D+ L
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 448 KGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATR 507
+ +++L L H N+ L KG +L+ + G L E S K
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGY--FYLVGEVYTGGELFD----EIISRKRFSEVDA 152
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR---YNPLLSDSGLHKLLADDIVFS 564
+I+ + GI+Y+H + +VH +L E +L+ + N + D GL +
Sbjct: 153 ARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLS---------T 201
Query: 565 MLKASAAMG-------YLAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
+AS M Y+APE G + EK D+++ G+I++ +LSG
Sbjct: 202 HFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 397 VERATQCFSE----ANLLGKSSFSATYKGILRD---GSVVAVKCIAKTSCK--SDEGEFL 447
V+ +T FS+ +LGK SF + +D G AVK I+K K +D+ L
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 448 KGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATR 507
+ +++L L H N+ L KG +L+ + G L E S K
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGY--FYLVGEVYTGGELFD----EIISRKRFSEVDA 151
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR---YNPLLSDSGLHKLLADDIVFS 564
+I+ + GI+Y+H + +VH +L E +L+ + N + D GL +
Sbjct: 152 ARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLS---------T 200
Query: 565 MLKASAAMG-------YLAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
+AS M Y+APE G + EK D+++ G+I++ +LSG
Sbjct: 201 HFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 402 QCFSEANLLGKSSFSATYKGIL-RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN 460
+ F++ +GK SF +KGI R VVA+K I + + + + + +L+
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520
+ G + ++I +++ G+ L L E G + AT +++ I KG+ Y
Sbjct: 82 VTKYYGSYLKDTK--LWIIMEYLGGGSALDLL--EPGPLDETQIAT---ILREILKGLDY 134
Query: 521 LHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAP 577
LH ++ +H ++ A VL+ L+D G+ L D + +K + +G ++AP
Sbjct: 135 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----TQIKRNXFVGTPFWMAP 188
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI----DPNLEGKF 633
E + K+DI++ G+ ++ G+ KV I P LEG +
Sbjct: 189 EVIKQSAYDSKADIWSLGITAIELARGEPP-----HSELHPMKVLFLIPKNNPPTLEGNY 243
Query: 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQ 664
S L + C ++ PS RP+ + +++
Sbjct: 244 S----KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 126/278 (45%), Gaps = 36/278 (12%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEG---EFLKGLKILTSLKHENLA 462
LG+ +F+ +KG+ R+ G + + + K K+ F + +++ L H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH 522
G+C E L+ +FV G+L +L +L W ++ V K +A + +L
Sbjct: 76 LNYGVCVCGD--ENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAAAMHFL- 129
Query: 523 GKRPGLVHPNLSAEKVLIHRRY-----NP---LLSDSGLH-KLLADDIVFSMLKASAAMG 573
+ L+H N+ A+ +L+ R NP LSD G+ +L DI+ +
Sbjct: 130 -EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL------QERIP 182
Query: 574 YLAPEYTTTGR-FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGK 632
++ PE + +D ++FG +++I SG P + A +S + F + +
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSG--GDKPLS--ALDSQRKLQFYED--RHQ 236
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+A+ L + +C P HRPS ++++L+S+
Sbjct: 237 LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 402 QCFSEANLLGKSSFSATYKGIL-RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN 460
+ F++ +GK SF +KGI R VVA+K I + + + + + +L+
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520
+ G + ++I +++ G+ L L E G + AT +++ I KG+ Y
Sbjct: 67 VTKYYGSYLKDTK--LWIIMEYLGGGSALDLL--EPGPLDETQIAT---ILREILKGLDY 119
Query: 521 LHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAP 577
LH ++ +H ++ A VL+ L+D G+ L D + +K + +G ++AP
Sbjct: 120 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----TQIKRNTFVGTPFWMAP 173
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI----DPNLEGKF 633
E + K+DI++ G+ ++ G+ KV I P LEG +
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPP-----HSELHPMKVLFLIPKNNPPTLEGNY 228
Query: 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQ 664
S L + C ++ PS RP+ + +++
Sbjct: 229 S----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 415 FSATYKGIL--RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKG 472
F A G+L ++VAVK + + + + +F + ++ + N+ L G+C + G
Sbjct: 64 FQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC-AVG 122
Query: 473 RGECFLIYDFVPNGNL--------------LQHLDLEAGSE------KVLEWATRISVIK 512
+ C L+++++ G+L L H DL + L A ++ + +
Sbjct: 123 KPMC-LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 181
Query: 513 GIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAA 571
+A G++YL ++ VH +L+ L+ ++D GL + + + D + +
Sbjct: 182 QVAAGMAYLSERK--FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIP 239
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ ++ PE R+T +SD++A+G+++++I S
Sbjct: 240 IRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 120/271 (44%), Gaps = 30/271 (11%)
Query: 402 QCFSEANLLGKSSFSATYKGIL-RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN 460
+ F++ +GK SF +KGI R VVA+K I + + + + + +L+
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520
+ G + ++I +++ G+ L L E G + AT +++ I KG+ Y
Sbjct: 67 VTKYYGSYLKDTK--LWIIMEYLGGGSALDLL--EPGPLDETQIAT---ILREILKGLDY 119
Query: 521 LHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAP 577
LH ++ +H ++ A VL+ L+D G+ L D + +K + +G ++AP
Sbjct: 120 LHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----TQIKRNXFVGTPFWMAP 173
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI----DPNLEGKF 633
E + K+DI++ G+ ++ G+ KV I P LEG +
Sbjct: 174 EVIKQSAYDSKADIWSLGITAIELARGEPP-----HSELHPMKVLFLIPKNNPPTLEGNY 228
Query: 634 SVSEASNLGQIALHCTHESPSHRPSIENVMQ 664
S L + C ++ PS RP+ + +++
Sbjct: 229 S----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 39/227 (17%)
Query: 397 VERATQCFSE----ANLLGKSSFSATYKGILRD---GSVVAVKCIAKTSCK--SDEGEFL 447
V+ +T FS+ +LGK SF + +D G AVK I+K K +D+ L
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 448 KGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATR 507
+ +++L L H N+ L KG +L+ + G L E S K
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGY--FYLVGEVYTGGELFD----EIISRKRFSEVDA 134
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR---YNPLLSDSGLHKLLADDIVFS 564
+I+ + GI+Y+H + +VH +L E +L+ + N + D GL +
Sbjct: 135 ARIIRQVLSGITYMHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLS---------T 183
Query: 565 MLKASAAMG-------YLAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
+AS M Y+APE G + EK D+++ G+I++ +LSG
Sbjct: 184 HFEASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 38/279 (13%)
Query: 410 LGKSSFSATYKGILRD----GSVVAVKCIAKTSCKSDEG---EFLKGLKILTSLKHENLA 462
LG+ +F+ +KG+ R+ G + + + K K+ F + +++ L H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 463 SLRGIC-CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYL 521
G+C C E L+ +FV G+L +L +L W ++ V K +A + +L
Sbjct: 76 LNYGVCFCG---DENILVQEFVKFGSLDTYLKKNKNCINIL-W--KLEVAKQLAWAMHFL 129
Query: 522 HGKRPGLVHPNLSAEKVLIHRRY-----NP---LLSDSGLH-KLLADDIVFSMLKASAAM 572
+ L+H N+ A+ +L+ R NP LSD G+ +L DI+ +
Sbjct: 130 --EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL------QERI 181
Query: 573 GYLAPEYTTTGR-FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEG 631
++ PE + +D ++FG +++I SG P + A +S + F +
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSG--GDKPLS--ALDSQRKLQFYED--RH 235
Query: 632 KFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSII 670
+ +A+ L + +C P HRPS ++++L+S+
Sbjct: 236 QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 125/274 (45%), Gaps = 36/274 (13%)
Query: 402 QCFSEANLLGKSSFSATYKGIL-RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN 460
+ F++ +GK SF +KGI R VVA+K I + + + + + +L+
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520
+ G KG + ++I +++ G+ L L AG + AT ++K I KG+ Y
Sbjct: 83 VTKYYG-SYLKG-SKLWIIMEYLGGGSALDLL--RAGPFDEFQIAT---MLKEILKGLDY 135
Query: 521 LHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAP 577
LH ++ +H ++ A VL+ + + L+D G+ L D + +K + +G ++AP
Sbjct: 136 LHSEKK--IHRDIKAANVLLSEQGDVKLADFGVAGQLTD----TQIKRNTFVGTPFWMAP 189
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGK---CSITPFTRQAAESSKVEDFI----DPNLE 630
E + K+DI++ G+ ++ G+ + P +V I P L
Sbjct: 190 EVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM--------RVLFLIPKNNPPTLV 241
Query: 631 GKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664
G F+ S + C ++ PS RP+ + +++
Sbjct: 242 GDFTKS----FKEFIDACLNKDPSFRPTAKELLK 271
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 105/250 (42%), Gaps = 22/250 (8%)
Query: 425 DGSVVAVKCIAKTSCKSDEGEFL-KGLKILTSLKHENLASLRGICCSKGRGECFLIYDFV 483
DG ++ K + S E + L + +L LKH N+ + +++ ++
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 484 PNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG---LVHPNLSAEKVLI 540
G+L + + L+ + V+ + + H + G ++H +L V +
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 541 HRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMI 597
+ N L D GL ++L D F A +G Y++PE + EKSDI++ G +
Sbjct: 150 DGKQNVKLGDFGLARILNHDEDF----AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCL 205
Query: 598 VFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFS---VSEASNLGQIALHCTHESPS 654
++++ + T F+ Q + K+ EGKF + L +I +
Sbjct: 206 LYELCALMPPFTAFS-QKELAGKIR-------EGKFRRIPYRYSDELNEIITRMLNLKDY 257
Query: 655 HRPSIENVMQ 664
HRPS+E +++
Sbjct: 258 HRPSVEEILE 267
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 34/221 (15%)
Query: 410 LGKSSFSATYKGI-LRDGSVVAVKCIAKTSCKS-DEGEFLKGLKILTSLK-HENLASLRG 466
LGK ++ +K I R G VVAVK I S D + + ILT L HEN+ +L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 467 ICCSKGRGECFLIYDFVPNGNLLQHLDLEAG-SEKVLEWATRISVIKGIAKGISYLHGKR 525
+ + + +L++D++ DL A +LE + V+ + K I YLH
Sbjct: 77 VLRADNDRDVYLVFDYMET-------DLHAVIRANILEPVHKQYVVYQLIKVIKYLHS-- 127
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA--------------------DDIVFSM 565
GL+H ++ +L++ + ++D GL + DD +
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 566 LKASAAMGYLAPEYTT-TGRFTEKSDIYAFGMIVFQILSGK 605
A Y APE + ++T+ D+++ G I+ +IL GK
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 120/293 (40%), Gaps = 51/293 (17%)
Query: 404 FSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLA 462
F E L+G F +K R DG ++ + + K++ + +K L L H N+
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE-----REVKALAKLDHVNIV 68
Query: 463 SLRGIC--------------------------CSKGRGEC-FLIYDFVPNGNLLQHLDLE 495
G S+ + +C F+ +F G L Q ++
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 496 AGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK 555
G + L+ + + + I KG+ Y+H K+ L+H +L + + + D GL
Sbjct: 129 RGEK--LDKVLALELFEQITKGVDYIHSKK--LIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 556 LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQA 615
L +D ++ + Y++PE ++ + ++ D+YA G+I+ ++L C A
Sbjct: 185 SLKND--GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV-CDT------A 235
Query: 616 AESSK-VEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELS 667
E+SK D D + F E + L ++ + P RP+ +++ L+
Sbjct: 236 FETSKFFTDLRDGIISDIFDKKEKTLLQKLL----SKKPEDRPNTSEILRTLT 284
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 397 VERATQCFSE----ANLLGKSSFSATYKGILRD---GSVVAVKCIAKTSCK--SDEGEFL 447
V+ +T FS+ +LGK SF + +D G AVK I+K K +D+ L
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 448 KGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATR 507
+ +++L L H N+ L KG +L+ + G L E S K
Sbjct: 75 REVQLLKQLDHPNIXKLYEFFEDKGY--FYLVGEVYTGGELFD----EIISRKRFSEVDA 128
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR---YNPLLSDSGLHKLLADDIVFS 564
+I+ + GI+Y H + +VH +L E +L+ + N + D GL +
Sbjct: 129 ARIIRQVLSGITYXHKNK--IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE-----A 181
Query: 565 MLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
K +G Y+APE G + EK D+++ G+I++ +LSG
Sbjct: 182 SKKXKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 404 FSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLA 462
F + LG +++ YKG+ + G VA+K + S + ++ + ++ LKHEN+
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLD----------LEAGSEKVLEWATRISVIK 512
L + ++ + L+++F+ N +L +++D LE K +W
Sbjct: 67 RLYDVIHTENK--LTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQ------- 116
Query: 513 GIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDI-VFSMLKASAA 571
+ +G+++ H + ++H +L + +LI++R L D GL + + FS
Sbjct: 117 -LLQGLAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFS--SEVVT 171
Query: 572 MGYLAPEYTTTGR-FTEKSDIYAFGMIVFQILSGK 605
+ Y AP+ R ++ DI++ G I+ ++++GK
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 427 SVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNG 486
+ VAVK + + + S+ + L +L + H ++ L G C G LI ++ G
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD--GPLLLIVEYAKYG 111
Query: 487 NLLQHLD--------------------LEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
+L L L+ E+ L IS I++G+ YL +
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK- 170
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
LVH +L+A +L+ +SD GL + + +D + + ++A E +
Sbjct: 171 -LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIY 229
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T +SD+++FG+++++I++ + P ++ + + + + + + ++
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYP----GIPPERLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
L C + P RP ++ ++L ++
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 113/265 (42%), Gaps = 29/265 (10%)
Query: 427 SVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNG 486
+ VAVK + + + S+ + L +L + H ++ L G C G LI ++ G
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD--GPLLLIVEYAKYG 111
Query: 487 NLLQHLD--------------------LEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
+L L L+ E+ L IS I++G+ YL +
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK- 170
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
LVH +L+A +L+ +SD GL + + +D + + ++A E +
Sbjct: 171 -LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY 229
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T +SD+++FG+++++I++ + P ++ + + + + + + ++
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYP----GIPPERLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
L C + P RP ++ ++L ++
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML-KASAAM 572
+AKG+ +L ++ +H +L+A +L+ + + D GL + + D + A +
Sbjct: 202 VAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 573 GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITP-------FTRQAAESSKVE--D 623
++APE +T +SD+++FG+++++I S S P F R+ E +++ D
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 319
Query: 624 FIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ P + Q L C H PS RP+ +++ L +++ ++
Sbjct: 320 YTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 55 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 113
Query: 488 LLQHL 492
L +L
Sbjct: 114 LSTYL 118
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML-KASAAM 572
+AKG+ +L ++ +H +L+A +L+ + + D GL + + D + A +
Sbjct: 209 VAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 573 GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITP-------FTRQAAESSKVE--D 623
++APE +T +SD+++FG+++++I S S P F R+ E +++ D
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 326
Query: 624 FIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ P + Q L C H PS RP+ +++ L +++ ++
Sbjct: 327 YTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 364
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 120
Query: 488 LLQHL 492
L +L
Sbjct: 121 LSTYL 125
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML-KASAAM 572
+AKG+ +L ++ +H +L+A +L+ + + D GL + + D + A +
Sbjct: 207 VAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 573 GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITP-------FTRQAAESSKVE--D 623
++APE +T +SD+++FG+++++I S S P F R+ E +++ D
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 324
Query: 624 FIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ P + Q L C H PS RP+ +++ L +++ ++
Sbjct: 325 YTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 362
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 118
Query: 488 LLQHL 492
L +L
Sbjct: 119 LSTYL 123
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 24/170 (14%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML-KASAAM 572
+AKG+ +L ++ +H +L+A +L+ + + D GL + + D + A +
Sbjct: 200 VAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 573 GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITP-------FTRQAAESSKVE--D 623
++APE +T +SD+++FG+++++I S S P F R+ E +++ D
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 317
Query: 624 FIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ P + Q L C H PS RP+ +++ L +++ ++
Sbjct: 318 YTTPEMY------------QTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 355
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGN 487
VAVK + + + S+ + LKIL + H N+ +L G C G G +I +F GN
Sbjct: 53 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-GPLMVIVEFCKFGN 111
Query: 488 LLQHL 492
L +L
Sbjct: 112 LSTYL 116
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL + E E I + + A+G+ YLH K +
Sbjct: 79 T---KPQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAK--SI 130
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADDIVFSMLKASAAMGYLAPEYTTTGR- 584
+H +L + + +H + D GL + + F L S ++ ++APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDK 188
Query: 585 --FTEKSDIYAFGMIVFQILSGK 605
++ +SD+YAFG++++++++G+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 112/265 (42%), Gaps = 29/265 (10%)
Query: 427 SVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNG 486
+ VAVK + + + S+ + L +L + H ++ L G C G LI ++ G
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD--GPLLLIVEYAKYG 111
Query: 487 NLLQHLD--------------------LEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
+L L L+ E+ L IS I++G+ YL
Sbjct: 112 SLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL--AEM 169
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
LVH +L+A +L+ +SD GL + + +D + + ++A E +
Sbjct: 170 SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIY 229
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
T +SD+++FG+++++I++ + P ++ + + + + + + ++
Sbjct: 230 TTQSDVWSFGVLLWEIVTLGGNPYP----GIPPERLFNLLKTGHRMERPDNCSEEMYRLM 285
Query: 646 LHCTHESPSHRPSIENVMQELSSII 670
L C + P RP ++ ++L ++
Sbjct: 286 LQCWKQEPDKRPVFADISKDLEKMM 310
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL + E E I + + A+G+ YLH K +
Sbjct: 76 T---KPQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAK--SI 127
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADDIVFSMLKASAAMGYLAPEYTTTGR- 584
+H +L + + +H + D GL + + F L S ++ ++APE
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDK 185
Query: 585 --FTEKSDIYAFGMIVFQILSGK 605
++ +SD+YAFG++++++++G+
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL + E E I + + A+G+ YLH K +
Sbjct: 74 T---KPQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAK--SI 125
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADDIVFSMLKASAAMGYLAPEYTTTGR- 584
+H +L + + +H + D GL + + F L S ++ ++APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDK 183
Query: 585 --FTEKSDIYAFGMIVFQILSGK 605
++ +SD+YAFG++++++++G+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL + E E I + + A+G+ YLH K +
Sbjct: 74 TAP---QLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAK--SI 125
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADDIVFSMLKASAAMGYLAPEYTTTGR- 584
+H +L + + +H + D GL + + F L S ++ ++APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDK 183
Query: 585 --FTEKSDIYAFGMIVFQILSGK 605
++ +SD+YAFG++++++++G+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL + E E I + + A+G+ YLH K +
Sbjct: 101 T---KPQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAK--SI 152
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADDIVFSMLKASAAMGYLAPEYTTTGR- 584
+H +L + + +H + D GL + + F L S ++ ++APE
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDK 210
Query: 585 --FTEKSDIYAFGMIVFQILSGK 605
++ +SD+YAFG++++++++G+
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL + E E I + + A+G+ YLH K +
Sbjct: 79 T---KPQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAK--SI 130
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADDIVFSMLKASAAMGYLAPEYTTTGR- 584
+H +L + + +H + D GL + + F L S ++ ++APE
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDK 188
Query: 585 --FTEKSDIYAFGMIVFQILSGK 605
++ +SD+YAFG++++++++G+
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL + E E I + + A+G+ YLH K +
Sbjct: 102 T---KPQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAK--SI 153
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKL---LADDIVFSMLKASAAMGYLAPEYTTTGR- 584
+H +L + + +H + D GL + + F L S ++ ++APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL--SGSILWMAPEVIRMQDK 211
Query: 585 --FTEKSDIYAFGMIVFQILSGK 605
++ +SD+YAFG++++++++G+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL + E E I + + A+G+ YLH K +
Sbjct: 102 T---KPQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAK--SI 153
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYLAPEYTTTGR- 584
+H +L + + +H + D GL + F L S ++ ++APE
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRMQDK 211
Query: 585 --FTEKSDIYAFGMIVFQILSGK 605
++ +SD+YAFG++++++++G+
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL + E E I + + A+G+ YLH K +
Sbjct: 94 T---KPQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAK--SI 145
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYLAPEYTTTGR- 584
+H +L + + +H + D GL + F L S ++ ++APE
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRMQDK 203
Query: 585 --FTEKSDIYAFGMIVFQILSGK 605
++ +SD+YAFG++++++++G+
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 32/220 (14%)
Query: 399 RATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGL-----KI 452
++ + + L+G+ S+ K +D G +VA+K +SD+ + +K + K+
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIK----KFLESDDDKMVKKIAMREIKL 77
Query: 453 LTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIK 512
L L+HENL +L +C K R +L+++FV + +L L+L L++ +
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRW--YLVFEFV-DHTILDDLELFPNG---LDYQVVQKYLF 131
Query: 513 GIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLA------DDIVFSML 566
I GI + H ++H ++ E +L+ + L D G + LA DD V
Sbjct: 132 QIINGIGFCHSH--NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV---- 185
Query: 567 KASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGK 605
A Y APE ++ + D++A G +V ++ G+
Sbjct: 186 ---ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 113/248 (45%), Gaps = 18/248 (7%)
Query: 429 VAVKCIAKTSCKSDE--GEFLKGLKILTSLKHENLASLRGICCSKGRGECF-LIYDFVPN 485
VA+K I + +E F + + + L H+N+ S+ + +C+ L+ +++
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDV---DEEDDCYYLVMEYIEG 95
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
L ++++ S L T I+ I GI + H R +VH ++ + +LI
Sbjct: 96 PTLSEYIE----SHGPLSVDTAINFTNQILDGIKHAHDMR--IVHRDIKPQNILIDSNKT 149
Query: 546 PLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK 605
+ D G+ K L++ + + Y +PE E +DIY+ G++++++L G+
Sbjct: 150 LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
Query: 606 CSITPFTRQAAESSKVEDFID--PNLEGKFSVSEASNLGQIALHCTHESPSHR-PSIENV 662
PF + A S ++ D PN+ +L + L T + ++R +I+ +
Sbjct: 210 ---PPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266
Query: 663 MQELSSII 670
+LSS++
Sbjct: 267 KDDLSSVL 274
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + T+ + + K + +L +H N+ G
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ + ++ + +L HL + E E I + + A+G+ YLH K +
Sbjct: 74 T---KPQLAIVTQWCEGSSLYHHLHI---IETKFEMIKLIDIARQTAQGMDYLHAK--SI 125
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYLAPEYTTTGR- 584
+H +L + + +H + D GL + F L S ++ ++APE
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL--SGSILWMAPEVIRMQDK 183
Query: 585 --FTEKSDIYAFGMIVFQILSGK 605
++ +SD+YAFG++++++++G+
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 95/186 (51%), Gaps = 15/186 (8%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNG-- 486
VA+K I C++ E LK ++ ++ H N+ S K E +L+ + G
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK--DELWLVMKLLSGGSV 100
Query: 487 -NLLQHLDLEAGSEK--VLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR 543
++++H+ + G K VL+ +T ++++ + +G+ YLH + G +H ++ A +L+
Sbjct: 101 LDIIKHI-VAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGED 157
Query: 544 YNPLLSDSGLHKLLAD--DIVFSMLKAS--AAMGYLAPEYTTTGR-FTEKSDIYAFGMIV 598
+ ++D G+ LA DI + ++ + ++APE R + K+DI++FG+
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 599 FQILSG 604
++ +G
Sbjct: 218 IELATG 223
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 409 LLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS-DEGEFLKGLKILTSLKHENLASLRG 466
+LGK SF K R AVK I K S K+ D L+ +++L L H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 467 ICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
I + +++ + G L E K +IK + GI+Y+H +
Sbjct: 89 IL--EDSSSFYIVGELYTGGELFD----EIIKRKRFSEHDAARIIKQVFSGITYMH--KH 140
Query: 527 GLVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG 583
+VH +L E +L+ + + D GL + M Y+APE G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPE-VLRG 197
Query: 584 RFTEKSDIYAFGMIVFQILSG 604
+ EK D+++ G+I++ +LSG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 95/186 (51%), Gaps = 15/186 (8%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K I C++ E LK ++ ++ H N+ S K E +L+ + G++
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK--DELWLVMKLLSGGSV 95
Query: 489 L---QHLDLEAGSEK--VLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR 543
L +H+ + G K VL+ +T ++++ + +G+ YLH + G +H ++ A +L+
Sbjct: 96 LDIIKHI-VAKGEHKSGVLDESTIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGED 152
Query: 544 YNPLLSDSGLHKLLAD--DIVFSMLKAS--AAMGYLAPEYTTTGR-FTEKSDIYAFGMIV 598
+ ++D G+ LA DI + ++ + ++APE R + K+DI++FG+
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 212
Query: 599 FQILSG 604
++ +G
Sbjct: 213 IELATG 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 24/263 (9%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTS--CKSDEGEFLKGLKILTSLKHENLASLRGI 467
+G+ SF YKG+ + +V C + KS+ F + + L L+H N+
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 468 CCS--KGRGECFLIYDFVPNGNLLQHLD-LEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
S KG+ L+ + +G L +L + KVL S + I KG+ +LH +
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLR-----SWCRQILKGLQFLHTR 148
Query: 525 RPGLVHPNLSAEKVLIHRRYNPL-LSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYT 580
P ++H +L + + I + + D GL L A A +G + APE
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF------AKAVIGTPEFXAPE-X 201
Query: 581 TTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASN 640
++ E D+YAFG + + + + A +V + P K ++ E
Sbjct: 202 YEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE--- 258
Query: 641 LGQIALHCTHESPSHRPSIENVM 663
+ +I C ++ R SI++++
Sbjct: 259 VKEIIEGCIRQNKDERYSIKDLL 281
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 122/274 (44%), Gaps = 36/274 (13%)
Query: 402 QCFSEANLLGKSSFSATYKGIL-RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN 460
+ F++ + +GK SF YKGI VVA+K I + + + + + +L+
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520
+ G + ++I +++ G+ L L+ G LE ++++ I KG+ Y
Sbjct: 79 ITRYFGSYLKSTK--LWIIMEYLGGGSALDL--LKPGP---LEETYIATILREILKGLDY 131
Query: 521 LHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAP 577
LH +R +H ++ A VL+ + + L+D G+ L D + +K + +G ++AP
Sbjct: 132 LHSERK--IHRDIKAANVLLSEQGDVKLADFGVAGQLTD----TQIKRNXFVGTPFWMAP 185
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGK---CSITPFTRQAAESSKVEDFI----DPNLE 630
E + K+DI++ G+ ++ G+ + P +V I P LE
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--------RVLFLIPKNSPPTLE 237
Query: 631 GKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664
G+ S + C ++ P RP+ + +++
Sbjct: 238 GQHS----KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 409 LLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS-DEGEFLKGLKILTSLKHENLASLRG 466
+LGK SF K R AVK I K S K+ D L+ +++L L H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 467 ICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
I + +++ + G L E K +IK + GI+Y+H +
Sbjct: 89 IL--EDSSSFYIVGELYTGGELFD----EIIKRKRFSEHDAARIIKQVFSGITYMH--KH 140
Query: 527 GLVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG 583
+VH +L E +L+ + + D GL + M Y+APE G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPE-VLRG 197
Query: 584 RFTEKSDIYAFGMIVFQILSG 604
+ EK D+++ G+I++ +LSG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 409 LLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKS-DEGEFLKGLKILTSLKHENLASLRG 466
+LGK SF K R AVK I K S K+ D L+ +++L L H N+ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 467 ICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRP 526
I + +++ + G L E K +IK + GI+Y+H +
Sbjct: 89 IL--EDSSSFYIVGELYTGGELFD----EIIKRKRFSEHDAARIIKQVFSGITYMH--KH 140
Query: 527 GLVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG 583
+VH +L E +L+ + + D GL + M Y+APE G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPE-VLRG 197
Query: 584 RFTEKSDIYAFGMIVFQILSG 604
+ EK D+++ G+I++ +LSG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 120/287 (41%), Gaps = 23/287 (8%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 38 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 95
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ L H+N+ +R I S F++ + + G+L L+ L
Sbjct: 96 LMEALIISKLNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 154 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 267
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
+V +F+ + + +I C P RP+ +++ +
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 128/297 (43%), Gaps = 49/297 (16%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASLRGI 467
+GK F ++G R G VAVK + +E + + +I + L+HEN+
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIA- 103
Query: 468 CCSKGRG---ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+K G + +L+ D+ +G+L +L+ + + + I + A G+++LH +
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 158
Query: 525 ------RPGLVHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYL 575
+P + H +L ++ +L+ + ++D GL H D I + Y+
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 576 APEY----TTTGRFT--EKSDIYAFGMIVFQILSGKCSI--------------TPFTRQA 615
APE F +++DIYA G++ ++I + +CSI P
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEI-ARRCSIGGIHEDYQLPYYDLVPSDPSV 277
Query: 616 AESSKV--EDFIDPNLEGKFSVSEASN-LGQIALHCTHESPSHRPSIENVMQELSSI 669
E KV E + PN+ ++ EA + +I C + + + R + + + LS +
Sbjct: 278 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 120/287 (41%), Gaps = 23/287 (8%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 24 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 81
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ L H+N+ +R I S F++ + + G+L L+ L
Sbjct: 82 LMEALIISKLNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 140 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 253
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
+V +F+ + + +I C P RP+ +++ +
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 128/297 (43%), Gaps = 49/297 (16%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASLRGI 467
+GK F ++G R G VAVK + +E + + +I + L+HEN+
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIA- 90
Query: 468 CCSKGRG---ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+K G + +L+ D+ +G+L +L+ + + + I + A G+++LH +
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 145
Query: 525 ------RPGLVHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYL 575
+P + H +L ++ +L+ + ++D GL H D I + Y+
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 576 APEY----TTTGRFT--EKSDIYAFGMIVFQILSGKCSI--------------TPFTRQA 615
APE F +++DIYA G++ ++I + +CSI P
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEI-ARRCSIGGIHEDYQLPYYDLVPSDPSV 264
Query: 616 AESSKV--EDFIDPNLEGKFSVSEASN-LGQIALHCTHESPSHRPSIENVMQELSSI 669
E KV E + PN+ ++ EA + +I C + + + R + + + LS +
Sbjct: 265 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 321
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 124/285 (43%), Gaps = 26/285 (9%)
Query: 407 ANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASL 464
A GK + Y I D ++ VAVK + ++ ++ + LK+L+ L H N+ +L
Sbjct: 56 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 115
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRI--------------SV 510
G C+ G G +I ++ G+LL L + S + + I S
Sbjct: 116 LG-ACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 511 IKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA 570
+AKG+++L K +H +L+A +L+ + D GL + + +D + ++K +A
Sbjct: 174 SYQVAKGMAFLASK--NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY-VVKGNA 230
Query: 571 AM--GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPN 628
+ ++APE +T +SD++++G+ ++++ S S P SK I
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP---GMPVDSKFYKMIKEG 287
Query: 629 LEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + I C P RP+ + ++Q + I S
Sbjct: 288 FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 332
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 128/297 (43%), Gaps = 49/297 (16%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASLRGI 467
+GK F ++G R G VAVK + +E + + +I + L+HEN+
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIA- 65
Query: 468 CCSKGRG---ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+K G + +L+ D+ +G+L +L+ + + + I + A G+++LH +
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 120
Query: 525 ------RPGLVHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYL 575
+P + H +L ++ +L+ + ++D GL H D I + Y+
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 576 APEY----TTTGRFT--EKSDIYAFGMIVFQILSGKCSI--------------TPFTRQA 615
APE F +++DIYA G++ ++I + +CSI P
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEI-ARRCSIGGIHEDYQLPYYDLVPSDPSV 239
Query: 616 AESSKV--EDFIDPNLEGKFSVSEASN-LGQIALHCTHESPSHRPSIENVMQELSSI 669
E KV E + PN+ ++ EA + +I C + + + R + + + LS +
Sbjct: 240 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 296
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 124/285 (43%), Gaps = 26/285 (9%)
Query: 407 ANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASL 464
A GK + Y I D ++ VAVK + ++ ++ + LK+L+ L H N+ +L
Sbjct: 33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 92
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRI--------------SV 510
G C+ G G +I ++ G+LL L + S + + I S
Sbjct: 93 LG-ACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 511 IKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA 570
+AKG+++L K +H +L+A +L+ + D GL + + +D + ++K +A
Sbjct: 151 SYQVAKGMAFLASK--NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY-VVKGNA 207
Query: 571 AM--GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPN 628
+ ++APE +T +SD++++G+ ++++ S S P SK I
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP---GMPVDSKFYKMIKEG 264
Query: 629 LEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + I C P RP+ + ++Q + I S
Sbjct: 265 FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 124/285 (43%), Gaps = 26/285 (9%)
Query: 407 ANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASL 464
A GK + Y I D ++ VAVK + ++ ++ + LK+L+ L H N+ +L
Sbjct: 49 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 108
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRI--------------SV 510
G C+ G G +I ++ G+LL L + S + + I S
Sbjct: 109 LG-ACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 511 IKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA 570
+AKG+++L K +H +L+A +L+ + D GL + + +D + ++K +A
Sbjct: 167 SYQVAKGMAFLASK--NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY-VVKGNA 223
Query: 571 AM--GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPN 628
+ ++APE +T +SD++++G+ ++++ S S P SK I
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP---GMPVDSKFYKMIKEG 280
Query: 629 LEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + I C P RP+ + ++Q + I S
Sbjct: 281 FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 325
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 124/285 (43%), Gaps = 26/285 (9%)
Query: 407 ANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASL 464
A GK + Y I D ++ VAVK + ++ ++ + LK+L+ L H N+ +L
Sbjct: 56 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 115
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRI--------------SV 510
G C+ G G +I ++ G+LL L + S + + I S
Sbjct: 116 LG-ACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 511 IKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA 570
+AKG+++L K +H +L+A +L+ + D GL + + +D + ++K +A
Sbjct: 174 SYQVAKGMAFLASK--NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY-VVKGNA 230
Query: 571 AM--GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPN 628
+ ++APE +T +SD++++G+ ++++ S S P SK I
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP---GMPVDSKFYKMIKEG 287
Query: 629 LEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + I C P RP+ + ++Q + I S
Sbjct: 288 FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 332
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 128/297 (43%), Gaps = 49/297 (16%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASLRGI 467
+GK F ++G R G VAVK + +E + + +I + L+HEN+
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIA- 64
Query: 468 CCSKGRG---ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+K G + +L+ D+ +G+L +L+ + + + I + A G+++LH +
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 119
Query: 525 ------RPGLVHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYL 575
+P + H +L ++ +L+ + ++D GL H D I + Y+
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 576 APEY----TTTGRFT--EKSDIYAFGMIVFQILSGKCSI--------------TPFTRQA 615
APE F +++DIYA G++ ++I + +CSI P
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEI-ARRCSIGGIHEDYQLPYYDLVPSDPSV 238
Query: 616 AESSKV--EDFIDPNLEGKFSVSEASN-LGQIALHCTHESPSHRPSIENVMQELSSI 669
E KV E + PN+ ++ EA + +I C + + + R + + + LS +
Sbjct: 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 128/297 (43%), Gaps = 49/297 (16%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASLRGI 467
+GK F ++G R G VAVK + +E + + +I + L+HEN+
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIA- 70
Query: 468 CCSKGRG---ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+K G + +L+ D+ +G+L +L+ + + + I + A G+++LH +
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 125
Query: 525 ------RPGLVHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYL 575
+P + H +L ++ +L+ + ++D GL H D I + Y+
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 576 APEY----TTTGRFT--EKSDIYAFGMIVFQILSGKCSI--------------TPFTRQA 615
APE F +++DIYA G++ ++I + +CSI P
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEI-ARRCSIGGIHEDYQLPYYDLVPSDPSV 244
Query: 616 AESSKV--EDFIDPNLEGKFSVSEASN-LGQIALHCTHESPSHRPSIENVMQELSSI 669
E KV E + PN+ ++ EA + +I C + + + R + + + LS +
Sbjct: 245 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 301
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 128/297 (43%), Gaps = 49/297 (16%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASLRGI 467
+GK F ++G R G VAVK + +E + + +I + L+HEN+
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIA- 67
Query: 468 CCSKGRG---ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
+K G + +L+ D+ +G+L +L+ + + + I + A G+++LH +
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 122
Query: 525 ------RPGLVHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYL 575
+P + H +L ++ +L+ + ++D GL H D I + Y+
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 576 APEY----TTTGRFT--EKSDIYAFGMIVFQILSGKCSI--------------TPFTRQA 615
APE F +++DIYA G++ ++I + +CSI P
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEI-ARRCSIGGIHEDYQLPYYDLVPSDPSV 241
Query: 616 AESSKV--EDFIDPNLEGKFSVSEASN-LGQIALHCTHESPSHRPSIENVMQELSSI 669
E KV E + PN+ ++ EA + +I C + + + R + + + LS +
Sbjct: 242 EEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 298
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 124/285 (43%), Gaps = 26/285 (9%)
Query: 407 ANLLGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSL-KHENLASL 464
A GK + Y I D ++ VAVK + ++ ++ + LK+L+ L H N+ +L
Sbjct: 51 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL 110
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRI--------------SV 510
G C+ G G +I ++ G+LL L + S + + I S
Sbjct: 111 LG-ACTIG-GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 511 IKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA 570
+AKG+++L K +H +L+A +L+ + D GL + + +D + ++K +A
Sbjct: 169 SYQVAKGMAFLASK--NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY-VVKGNA 225
Query: 571 AM--GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPN 628
+ ++APE +T +SD++++G+ ++++ S S P SK I
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP---GMPVDSKFYKMIKEG 282
Query: 629 LEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSIIGSS 673
+ + I C P RP+ + ++Q + I S
Sbjct: 283 FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 327
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVVAVKCIAKTSC-KSDEGEFL-KGLKILTSLKHEN 460
F +LG+ SFS L A+K + K K ++ ++ + +++ L H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520
L C + + + + NG LL+++ + GS E TR + I + Y
Sbjct: 99 FVKL--YFCFQDDEKLYFGLSYAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEY 152
Query: 521 LHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAP 577
LHGK G++H +L E +L++ + ++D G K+L+ + +A+ +G Y++P
Sbjct: 153 LHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSP 208
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
E T + SD++A G I++Q+++G + PF
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAG---LPPF 239
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 119/261 (45%), Gaps = 26/261 (9%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE-CFLIYDF 482
+D +VAVK + + + + +F + ++LT+L+HE++ G+C G G+ +++++
Sbjct: 43 KDKMLVAVKALKDPTLAARK-DFQREAELLTNLQHEHIVKFYGVC---GDGDPLIMVFEY 98
Query: 483 VPNGNLLQHLDLEAGSEKVLE------------WATRISVIKGIAKGISYLHGKRPGLVH 530
+ +G+L + L +L + + + IA G+ YL + VH
Sbjct: 99 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH--FVH 156
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
+L+ L+ + D G+ + + + D + ++ PE +FT +S
Sbjct: 157 RDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 216
Query: 590 DIYAFGMIVFQILS-GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHC 648
D+++FG+I+++I + GK P+ Q + + +E + + V + + L C
Sbjct: 217 DVWSFGVILWEIFTYGK---QPWF-QLSNTEVIECITQGRVLERPRVC-PKEVYDVMLGC 271
Query: 649 THESPSHRPSIENVMQELSSI 669
P R +I+ + + L ++
Sbjct: 272 WQREPQQRLNIKEIYKILHAL 292
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 404 FSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC-KSDEGEFLKGLKILTSLKHENL 461
F +LGK SF +++ G + AVK + K + D+ E K + SL +
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 462 ASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYL 521
+ CC + F + +FV G+L+ H+ S + E R + I + +L
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI---QKSRRFDEARARFYAAE-IISALMFL 140
Query: 522 HGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKAS--AAMGYLAPEY 579
H K G+++ +L + VL+ + L+D G+ K + I + A+ Y+APE
Sbjct: 141 HDK--GIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAPEI 195
Query: 580 TTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
+ D +A G++++++L C PF
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEML---CGHAPF 224
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 119/287 (41%), Gaps = 23/287 (8%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 38 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 95
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 96 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 154 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 267
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
+V +F+ + + +I C P RP+ +++ +
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 119/287 (41%), Gaps = 23/287 (8%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 15 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 72
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 73 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 130
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 131 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 188
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 189 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 244
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
+V +F+ + + +I C P RP+ +++ +
Sbjct: 245 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 105/230 (45%), Gaps = 22/230 (9%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAK-TSCKSDEGEFLKGLKIL 453
+++ + F +LGK SF + + A+K + K D+ E K +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 454 TSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKG 513
SL E+ C + + F + +++ G+L+ H+ ++ + L AT +
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAA--E 127
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK--LLADDIVFSMLKASAA 571
I G+ +LH K G+V+ +L + +L+ + + ++D G+ K +L D K +
Sbjct: 128 IILGLQFLHSK--GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD------AKTNEF 179
Query: 572 MG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAES 618
G Y+APE ++ D ++FG++++++L G+ +PF Q E
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ---SPFHGQDEEE 226
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 119/287 (41%), Gaps = 23/287 (8%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 24 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 81
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 82 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 140 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA 197
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 253
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
+V +F+ + + +I C P RP+ +++ +
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 23/288 (7%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 23 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 80
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 81 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 139 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 252
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELS 667
+V +F+ + + +I C P RP+ +++ +
Sbjct: 253 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 23/288 (7%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 38 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDF 95
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 96 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 154 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 267
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELS 667
+V +F+ + + +I C P RP+ +++ +
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 119/288 (41%), Gaps = 23/288 (7%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 23 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 80
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 81 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 139 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 252
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQELS 667
+V +F+ + + +I C P RP+ +++ +
Sbjct: 253 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 119/287 (41%), Gaps = 23/287 (8%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 24 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 81
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 82 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 140 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 253
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
+V +F+ + + +I C P RP+ +++ +
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 111 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 164
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+A +G Y++PE T + SD++A G I+
Sbjct: 165 EDMHIQITDFGTAKVLSPES--KQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 599 FQILSG 604
+Q+++G
Sbjct: 223 YQLVAG 228
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 430 AVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVP 484
A K I K ++ E + + IL + H N+ +L + + R + LI + V
Sbjct: 41 AAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVS 98
Query: 485 NGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR 543
G L L E+ SE E AT S IK I G++YLH K+ + H +L E +++ +
Sbjct: 99 GGELFDFLAQKESLSE---EEAT--SFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDK 151
Query: 544 YNPL----LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVF 599
P+ L D GL + D + F + + ++APE ++D+++ G+I +
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 600 QILSGKCSITPFTRQ 614
+LSG T+Q
Sbjct: 210 ILLSGASPFLGDTKQ 224
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 430 AVKCIAKTSCKSDEG-----EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVP 484
A K I K ++ E + + IL + H N+ +L + + R + LI + V
Sbjct: 41 AAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVS 98
Query: 485 NGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR 543
G L L E+ SE E AT S IK I G++YLH K+ + H +L E +++ +
Sbjct: 99 GGELFDFLAQKESLSE---EEAT--SFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDK 151
Query: 544 YNPL----LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVF 599
P+ L D GL + D + F + + ++APE ++D+++ G+I +
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 600 QILSGKCSITPFTRQ 614
+LSG T+Q
Sbjct: 210 ILLSGASPFLGDTKQ 224
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 430 AVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVP 484
A K I K ++ E + + IL + H N+ +L + + R + LI + V
Sbjct: 41 AAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVS 98
Query: 485 NGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR 543
G L L E+ SE E AT S IK I G++YLH K+ + H +L E +++ +
Sbjct: 99 GGELFDFLAQKESLSE---EEAT--SFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDK 151
Query: 544 YNPL----LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVF 599
P+ L D GL + D + F + + ++APE ++D+++ G+I +
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 600 QILSGKCSITPFTRQ 614
+LSG T+Q
Sbjct: 210 ILLSGASPFLGDTKQ 224
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 430 AVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVP 484
A K I K ++ E + + IL + H N+ +L + + R + LI + V
Sbjct: 41 AAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVS 98
Query: 485 NGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR 543
G L L E+ SE E AT S IK I G++YLH K+ + H +L E +++ +
Sbjct: 99 GGELFDFLAQKESLSE---EEAT--SFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDK 151
Query: 544 YNPL----LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVF 599
P+ L D GL + D + F + + ++APE ++D+++ G+I +
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 600 QILSGKCSITPFTRQ 614
+LSG T+Q
Sbjct: 210 ILLSGASPFLGDTKQ 224
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 130/319 (40%), Gaps = 55/319 (17%)
Query: 378 SGNGFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKT 437
S F ++ ++ +F L+E + + L+GK F Y G R VA++ I
Sbjct: 10 SARSFPRKASQTSIF-LQEWDIPFEQLEIGELIGKGRFGQVYHG--RWHGEVAIRLIDIE 66
Query: 438 SCKSDE-GEFLKGLKILTSLKHENLASLRGICCS-----------KGRGECFLIYDFVPN 485
D+ F + + +HEN+ G C S KGR +Y V +
Sbjct: 67 RDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR----TLYSVVRD 122
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
++ LD+ TR + + I KG+ YLH K G++H +L ++ V +
Sbjct: 123 AKIV--LDVNK---------TR-QIAQEIVKGMGYLHAK--GILHKDLKSKNVF-YDNGK 167
Query: 546 PLLSDSGLHK----LLADDIVFSMLKASAAMGYLAPEY-------TTTGR--FTEKSDIY 592
+++D GL L A + + + +LAPE T + F++ SD++
Sbjct: 168 VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVF 227
Query: 593 AFGMIVFQILSGKCSITPFTRQAAES--SKVEDFIDPNLEGKFSVSEASNLGQIALHCTH 650
A G I +++ + + PF Q AE+ ++ + PNL + + I L C
Sbjct: 228 ALGTIWYELHAREW---PFKTQPAEAIIWQMGTGMKPNLS---QIGMGKEISDILLFCWA 281
Query: 651 ESPSHRPSIENVMQELSSI 669
RP+ +M L +
Sbjct: 282 FEQEERPTFTKLMDMLEKL 300
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 21/195 (10%)
Query: 430 AVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVP 484
A K I K ++ E + + IL + H N+ +L + + R + LI + V
Sbjct: 41 AAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY--ENRTDVVLILELVS 98
Query: 485 NGNLLQHL-DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR 543
G L L E+ SE E AT S IK I G++YLH K+ + H +L E +++ +
Sbjct: 99 GGELFDFLAQKESLSE---EEAT--SFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDK 151
Query: 544 YNPL----LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVF 599
P+ L D GL + D + F + + ++APE ++D+++ G+I +
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITY 209
Query: 600 QILSGKCSITPFTRQ 614
+LSG T+Q
Sbjct: 210 ILLSGASPFLGDTKQ 224
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 105/230 (45%), Gaps = 22/230 (9%)
Query: 396 EVERATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAK-TSCKSDEGEFLKGLKIL 453
+++ + F +LGK SF + + A+K + K D+ E K +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 454 TSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKG 513
SL E+ C + + F + +++ G+L+ H+ ++ + L AT +
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAA--E 126
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK--LLADDIVFSMLKASAA 571
I G+ +LH K G+V+ +L + +L+ + + ++D G+ K +L D K +
Sbjct: 127 IILGLQFLHSK--GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD------AKTNXF 178
Query: 572 MG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAES 618
G Y+APE ++ D ++FG++++++L G+ +PF Q E
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ---SPFHGQDEEE 225
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 119/287 (41%), Gaps = 23/287 (8%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 30 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 87
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 88 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 145
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 146 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 203
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 204 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 259
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
+V +F+ + + +I C P RP+ +++ +
Sbjct: 260 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 119/287 (41%), Gaps = 23/287 (8%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 40 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 97
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 98 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 155
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 156 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 213
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 214 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 269
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
+V +F+ + + +I C P RP+ +++ +
Sbjct: 270 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 123/295 (41%), Gaps = 39/295 (13%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 64 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 121
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 122 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 179
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL------- 556
+ V + IA G YL +H +++A N LL+ G ++
Sbjct: 180 MLDLLHVARDIACGCQYLEENH--FIHRDIAAR--------NCLLTCPGPGRVAKIGDFG 229
Query: 557 LADDIVFS--MLKASAAM---GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
+A DI + K AM ++ PE G FT K+D ++FG+++++I S P+
Sbjct: 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPY 287
Query: 612 TRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
++ + +V +F+ + + +I C P RP+ +++ +
Sbjct: 288 PSKS--NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/263 (18%), Positives = 116/263 (44%), Gaps = 25/263 (9%)
Query: 424 RDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFV 483
+D +VAVK + K + + +F + ++LT+L+HE++ G+C ++++++
Sbjct: 41 QDKILVAVKTL-KDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG--DPLIMVFEYM 97
Query: 484 PNGNLLQHLD---------LEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLS 534
+G+L + L E L + + + + IA G+ YL + VH +L+
Sbjct: 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLA 155
Query: 535 AEKVLIHRRYNPLLSDSGLHK-LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYA 593
L+ + D G+ + + + D + ++ PE +FT +SD+++
Sbjct: 156 TRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 215
Query: 594 FGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEAS---NLGQIALHCTH 650
G+++++I + + +Q + I+ +G+ + + ++ L C
Sbjct: 216 LGVVLWEIFT-------YGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQ 268
Query: 651 ESPSHRPSIENVMQELSSIIGSS 673
P R +I+ + L ++ +S
Sbjct: 269 REPHMRKNIKGIHTLLQNLAKAS 291
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 123/295 (41%), Gaps = 39/295 (13%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 41 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 98
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 99 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 156
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKL------- 556
+ V + IA G YL +H +++A N LL+ G ++
Sbjct: 157 MLDLLHVARDIACGCQYLEENH--FIHRDIAAR--------NCLLTCPGPGRVAKIGDFG 206
Query: 557 LADDIVFS--MLKASAAM---GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
+A DI + K AM ++ PE G FT K+D ++FG+++++I S P+
Sbjct: 207 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPY 264
Query: 612 TRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
++ + +V +F+ + + +I C P RP+ +++ +
Sbjct: 265 PSKS--NQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 124/295 (42%), Gaps = 45/295 (15%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASL--R 465
+GK + ++G + G VAVK + DE + + ++ + L+HEN+
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIAS 99
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK- 524
+ + +LI + G+L +L L L+ + + ++ IA G+++LH +
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEI 154
Query: 525 -----RPGLVHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYLA 576
+P + H +L ++ +L+ + ++D GL H + + Y+A
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 577 PEYTTTGRFTE------KSDIYAFGMIVFQILSGKCS-------ITPFTRQAAESSKVED 623
PE + + DI+AFG++++++ S PF ED
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED 274
Query: 624 F-----ID---PNLEGK-FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669
+D PN+ + FS ++L ++ C +++PS R + + + L+ I
Sbjct: 275 MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 329
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATY--KGILR--DGSVVAVKCIAKTSCK-SDEGEFLKGLKILTSLKH 458
F +LG+ SF + + + R G + A+K + K + K D IL + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAG-SEKVLEWATRISVIKGIAKG 517
+ L ++G+ +LI DF+ G+L L E +E+ +++ + +A G
Sbjct: 90 PFVVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALG 142
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---Y 574
+ +LH G+++ +L E +L+ + L+D GL K D KA + G Y
Sbjct: 143 LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAID----HEKKAYSFCGTVEY 196
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
+APE + +D +++G+++F++L+G
Sbjct: 197 MAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 16/175 (9%)
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHL-DLEAGSEKVLE 503
E + + IL + H N+ +L + + R + LI + V G L L E+ SE E
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVY--ENRTDVVLILELVSGGELFDFLAQKESLSE---E 115
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPL----LSDSGLHKLLAD 559
AT S IK I G++YLH K+ + H +L E +++ + P+ L D GL + D
Sbjct: 116 EAT--SFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED 171
Query: 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQ 614
+ F + + ++APE ++D+++ G+I + +LSG T+Q
Sbjct: 172 GVEFKNIFGTPE--FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 224
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 119/287 (41%), Gaps = 23/287 (8%)
Query: 393 NLEEVERATQCFSEANLLGKSSFSATYKG----ILRDGS--VVAVKCIAKTSCKSDEGEF 446
+L+EV R LG +F Y+G + D S VAVK + + + DE +F
Sbjct: 50 DLKEVPRKNITLIRG--LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 107
Query: 447 LKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL---LQHLDLEAGSEKVLE 503
L I++ H+N+ +R I S F++ + + G+L L+ L
Sbjct: 108 LMEALIISKFNHQNI--VRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 165
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ V + IA G YL +H +++A L+ ++ G + D
Sbjct: 166 MLDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 223
Query: 564 SMLK----ASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESS 619
S + A + ++ PE G FT K+D ++FG+++++I S P+ ++ +
Sbjct: 224 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKS--NQ 279
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQEL 666
+V +F+ + + +I C P RP+ +++ +
Sbjct: 280 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 40/254 (15%)
Query: 426 GSVVAVKCIAKTSCK--SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFV 483
G+ A+K I K+S S+ G L + +L L H N+ L + + +L+ +
Sbjct: 29 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFF--EDKRNYYLVMEVY 86
Query: 484 PNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR 543
G L + L +V ++K + G +YLH + +VH +L E +L+ +
Sbjct: 87 RGGELFDEIILRQKFSEV----DAAVIMKQVLSGTTYLH--KHNIVHRDLKPENLLLESK 140
Query: 544 YNPLL---SDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQ 600
L D GL ++ M + Y+APE ++ EK D+++ G+I++
Sbjct: 141 SRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYI 197
Query: 601 ILSGKCSITPFTRQAAES--SKVEDFIDPNLEGKFSV---------SEASNLGQIALHCT 649
+L C PF Q + +VE +GKFS EA L + L T
Sbjct: 198 LL---CGYPPFGGQTDQEILKRVE-------KGKFSFDPPDWTQVSDEAKQL--VKLMLT 245
Query: 650 HESPSHRPSIENVM 663
+E PS R S E +
Sbjct: 246 YE-PSKRISAEEAL 258
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 21/184 (11%)
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504
E + +L SL H N+ L + K +L+ +F G L + + + +
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKY--FYLVTEFYEGGELFEQI----INRHKFDE 145
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLS----DSGLHKLLADD 560
+++K I GI YLH + +VH ++ E +L+ + N LL+ D GL + D
Sbjct: 146 CDAANIMKQILSGICYLH--KHNIVHRDIKPENILLENK-NSLLNIKIVDFGLSSFFSKD 202
Query: 561 IVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAES-- 618
+ + Y+APE ++ EK D+++ G+I++ +L C PF Q +
Sbjct: 203 --YKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILL---CGYPPFGGQNDQDII 256
Query: 619 SKVE 622
KVE
Sbjct: 257 KKVE 260
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGE-FLKGLKILTSLKHENLASLRGIC 468
+G SF YKG VAVK + ++ + F + +L +H N+ G
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ ++ + +L +HL ++ E + I + + A+G+ YLH K +
Sbjct: 102 T---KDNLAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK--NI 153
Query: 529 VHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKA-SAAMGYLAPEYTTTGR--- 584
+H ++ + + +H + D GL + + ++ + ++ ++APE
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 585 FTEKSDIYAFGMIVFQILSGK 605
F+ +SD+Y++G++++++++G+
Sbjct: 214 FSFQSDVYSYGIVLYELMTGE 234
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 404 FSEANLLGKSSFSATYKG-ILRDGSVVAVKCIAKTSC-KSDEGEFLKG-LKILTSLKHEN 460
F NLLGK SF+ Y+ + G VA+K I K + K+ + ++ +KI LKH +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520
+ L + +L+ + NG + ++L K + I G+ Y
Sbjct: 73 ILELYNYF--EDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQIITGMLY 127
Query: 521 LHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAP 577
LH G++H +L+ +L+ R N ++D GL A + K G Y++P
Sbjct: 128 LHSH--GILHRDLTLSNLLLTRNMNIKIADFGL----ATQLKMPHEKHYTLCGTPNYISP 181
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGK 605
E T +SD+++ G + + +L G+
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 40/254 (15%)
Query: 426 GSVVAVKCIAKTSCK--SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFV 483
G+ A+K I K+S S+ G L + +L L H N+ L + + +L+ +
Sbjct: 46 GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFF--EDKRNYYLVMEVY 103
Query: 484 PNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR 543
G L + L +V ++K + G +YLH + +VH +L E +L+ +
Sbjct: 104 RGGELFDEIILRQKFSEV----DAAVIMKQVLSGTTYLH--KHNIVHRDLKPENLLLESK 157
Query: 544 YNPLL---SDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQ 600
L D GL ++ M + Y+APE ++ EK D+++ G+I++
Sbjct: 158 SRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYI 214
Query: 601 ILSGKCSITPFTRQAAES--SKVEDFIDPNLEGKFSV---------SEASNLGQIALHCT 649
+L C PF Q + +VE +GKFS EA L + L T
Sbjct: 215 LL---CGYPPFGGQTDQEILKRVE-------KGKFSFDPPDWTQVSDEAKQL--VKLMLT 262
Query: 650 HESPSHRPSIENVM 663
+E PS R S E +
Sbjct: 263 YE-PSKRISAEEAL 275
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 124/295 (42%), Gaps = 45/295 (15%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASL--R 465
+GK + ++G + G VAVK + DE + + ++ + L+HEN+
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK- 524
+ + +LI + G+L +L L L+ + + ++ IA G+++LH +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 525 -----RPGLVHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYLA 576
+P + H +L ++ +L+ + ++D GL H + + Y+A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 577 PEYTTTGRFTE------KSDIYAFGMIVFQILSGKCS-------ITPFTRQAAESSKVED 623
PE + + DI+AFG++++++ S PF ED
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED 245
Query: 624 F-----ID---PNLEGK-FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669
+D PN+ + FS ++L ++ C +++PS R + + + L+ I
Sbjct: 246 MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 99/207 (47%), Gaps = 16/207 (7%)
Query: 404 FSEANLLGKSSFSATYKGI-LRDGSVVAVKCIAKTSC-KSDEGEFL-KGLKILTSLKHEN 460
F +LG+ SFS T L A+K + K K ++ ++ + +++ L H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520
L + + + + NG LL+++ + GS E TR + I + Y
Sbjct: 92 FVKL--YFTFQDDEKLYFGLSYAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEY 145
Query: 521 LHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAP 577
LHGK G++H +L E +L++ + ++D G K+L+ + +A+ +G Y++P
Sbjct: 146 LHGK--GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSP 201
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSG 604
E T + SD++A G I++Q+++G
Sbjct: 202 ELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 114 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 167
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A++ +G Y++PE T + SD++A G I+
Sbjct: 168 EDMHIQITDFGTAKVLSPES--KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
Query: 599 FQILSG 604
+Q+++G
Sbjct: 226 YQLVAG 231
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 12/167 (7%)
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML- 566
IS +A+G+ +L ++ +H +L+A +L+ + D GL + + + +
Sbjct: 202 ISYSFQVARGMEFLSSRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKG 259
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFID 626
+ ++APE ++ KSD++++G+++++I S S P + EDF
Sbjct: 260 DTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMD------EDFCS 313
Query: 627 PNLEG-KFSVSEAS--NLGQIALHCTHESPSHRPSIENVMQELSSII 670
EG + E S + QI L C H P RP ++++L ++
Sbjct: 314 RLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKLGDLL 360
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 385 EVLESFMFNLEEVERATQCFSEANLLGKSSF----SATYKGILRDGS--VVAVKCIAKTS 438
E E ++ + E A + LG+ +F A+ GI + + VAVK + + +
Sbjct: 10 EQCERLPYDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGA 69
Query: 439 CKSDEGEFLKGLKILTSLKHE-NLASLRGICCSKGRGECFLIYDFVPNGNLLQHL 492
S+ + LKILT + H N+ +L G C +G G +I ++ GNL +L
Sbjct: 70 TASEYKALMTELKILTHIGHHLNVVNLLGACTKQG-GPLMVIVEYCKYGNLSNYL 123
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 124/295 (42%), Gaps = 45/295 (15%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASL--R 465
+GK + ++G + G VAVK + DE + + ++ + L+HEN+
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK- 524
+ + +LI + G+L +L L L+ + + ++ IA G+++LH +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEI 125
Query: 525 -----RPGLVHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYLA 576
+P + H +L ++ +L+ + ++D GL H + + Y+A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 577 PEYTTTGRFTE------KSDIYAFGMIVFQILSGKCS-------ITPFTRQAAESSKVED 623
PE + + DI+AFG++++++ S PF ED
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED 245
Query: 624 F-----ID---PNLEGK-FSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669
+D PN+ + FS ++L ++ C +++PS R + + + L+ I
Sbjct: 246 MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 71/126 (56%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 113 YAKNGCLLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 166
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A++ +G Y++PE T ++ SD++A G I+
Sbjct: 167 EDMHIQITDFGTAKVLSPES--KQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCII 224
Query: 599 FQILSG 604
+Q+++G
Sbjct: 225 YQLVAG 230
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 39/240 (16%)
Query: 399 RATQCFSEANLLGKSSFSATYKGI-LRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK 457
R F E +LG+ +F K D A+K I T K L + +L SL
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVMLLASLN 60
Query: 458 HENLAS-----------LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWAT 506
H+ + ++ + K + F+ ++ NG L + E +++ E+
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW- 119
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+ + I + +SY+H + G++H +L + I N + D GL K + + L
Sbjct: 120 --RLFRQILEALSYIHSQ--GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 567 KA----------SAAMG---YLAPEYTT-TGRFTEKSDIYAFGMIVFQILSGKCSITPFT 612
+ ++A+G Y+A E TG + EK D+Y+ G+I F++ I PF+
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM------IYPFS 229
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 91 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 144
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 145 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 202
Query: 599 FQILSG 604
+Q+++G
Sbjct: 203 YQLVAG 208
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 410 LGKSSFSATYKGILRD-GSVVAVKCI-AKTSCKSDEGEFLKGLKILTSLKHENLASLRGI 467
LGK +FS + + + G A K I K D + + +I L+H N+ L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 468 CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG 527
+ +L++D V G L + + + + A I+ I + I+Y H G
Sbjct: 97 IQEESFH--YLVFDLVTGGELFEDI----VAREFYSEADASHCIQQILESIAYCHSN--G 148
Query: 528 LVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+VH NL E +L+ + L+D GL + D + + GYL+PE
Sbjct: 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP--GYLSPEVLKKDP 206
Query: 585 FTEKSDIYAFGMIVFQILSG 604
+++ DI+A G+I++ +L G
Sbjct: 207 YSKPVDIWACGVILYILLVG 226
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 90 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 143
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 144 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 201
Query: 599 FQILSG 604
+Q+++G
Sbjct: 202 YQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 89 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 142
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 143 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 200
Query: 599 FQILSG 604
+Q+++G
Sbjct: 201 YQLVAG 206
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 116 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 169
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 170 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 227
Query: 599 FQILSG 604
+Q+++G
Sbjct: 228 YQLVAG 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 113 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 166
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 167 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCII 224
Query: 599 FQILSG 604
+Q+++G
Sbjct: 225 YQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 88 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 141
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 142 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 199
Query: 599 FQILSG 604
+Q+++G
Sbjct: 200 YQLVAG 205
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 70/126 (55%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 110 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 163
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A++ +G Y++PE T + SD++A G I+
Sbjct: 164 EDMHIQITDFGTAKVLSPES--KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
Query: 599 FQILSG 604
+Q+++G
Sbjct: 222 YQLVAG 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 113 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 166
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 167 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 599 FQILSG 604
+Q+++G
Sbjct: 225 YQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 113 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 166
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 167 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 599 FQILSG 604
+Q+++G
Sbjct: 225 YQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 111 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 164
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 165 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 599 FQILSG 604
+Q+++G
Sbjct: 223 YQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 113 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 166
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 167 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 599 FQILSG 604
+Q+++G
Sbjct: 225 YQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 114 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 167
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 168 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
Query: 599 FQILSG 604
+Q+++G
Sbjct: 226 YQLVAG 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 111 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 164
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 165 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 599 FQILSG 604
+Q+++G
Sbjct: 223 YQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 113 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 166
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 167 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 599 FQILSG 604
+Q+++G
Sbjct: 225 YQLVAG 230
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 23/232 (9%)
Query: 385 EVLESFMFNLEEVERATQCFSEANLL-------GKSSFSATYKGI--LRDGSVVAVKCIA 435
EV ES + EE+ R + + + LL G +F KG ++ I
Sbjct: 346 EVFESPFADPEEI-RPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKIL 404
Query: 436 KTSCKSD--EGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLD 493
K + E L ++ L + + + GIC ++ L+ + G L ++L
Sbjct: 405 KNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAES---WMLVMEMAELGPLNKYLQ 461
Query: 494 LEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGL 553
+ ++ I ++ ++ G+ YL + VH +L+A VL+ ++ +SD GL
Sbjct: 462 ----QNRHVKDKNIIELVHQVSMGMKYL--EESNFVHRDLAARNVLLVTQHYAKISDFGL 515
Query: 554 HKLL-ADDIVF-SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
K L AD+ + + + + APE +F+ KSD+++FG+++++ S
Sbjct: 516 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 95 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 148
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 149 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 206
Query: 599 FQILSG 604
+Q+++G
Sbjct: 207 YQLVAG 212
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 410 LGKSSFSATYKGILRD-GSVVAVKCI-AKTSCKSDEGEFLKGLKILTSLKHENLASLRGI 467
LGK +FS + + + G A K I K D + + +I L+H N+ L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 468 CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG 527
+ +L++D V G L + + + + A I+ I + I+Y H G
Sbjct: 74 IQEESFH--YLVFDLVTGGELFEDI----VAREFYSEADASHCIQQILESIAYCHSN--G 125
Query: 528 LVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+VH NL E +L+ + L+D GL + D + + GYL+PE
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP--GYLSPEVLKKDP 183
Query: 585 FTEKSDIYAFGMIVFQILSG 604
+++ DI+A G+I++ +L G
Sbjct: 184 YSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 410 LGKSSFSATYKGILRD-GSVVAVKCI-AKTSCKSDEGEFLKGLKILTSLKHENLASLRGI 467
LGK +FS + + + G A K I K D + + +I L+H N+ L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 468 CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG 527
+ +L++D V G L + + + + A I+ I + I+Y H G
Sbjct: 73 IQEESFH--YLVFDLVTGGELFEDI----VAREFYSEADASHCIQQILESIAYCHSN--G 124
Query: 528 LVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+VH NL E +L+ + L+D GL + D + + GYL+PE
Sbjct: 125 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP--GYLSPEVLKKDP 182
Query: 585 FTEKSDIYAFGMIVFQILSG 604
+++ DI+A G+I++ +L G
Sbjct: 183 YSKPVDIWACGVILYILLVG 202
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ NG LL+++ + GS E TR + I + YLHGK G++H +L E +L++
Sbjct: 110 YAKNGELLKYIR-KIGS--FDETCTRFYTAE-IVSALEYLHGK--GIIHRDLKPENILLN 163
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIV 598
+ ++D G K+L+ + +A+ +G Y++PE T + SD++A G I+
Sbjct: 164 EDMHIQITDFGTAKVLSPES--KQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
Query: 599 FQILSG 604
+Q+++G
Sbjct: 222 YQLVAG 227
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 410 LGKSSFSATYKGILRD-GSVVAVKCI-AKTSCKSDEGEFLKGLKILTSLKHENLASLRGI 467
LGK +FS + + + G A K I K D + + +I L+H N+ L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 468 CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG 527
+ +L++D V G L + + + + A I+ I + I+Y H G
Sbjct: 74 IQEESFH--YLVFDLVTGGELFEDI----VAREFYSEADASHCIQQILESIAYCHSN--G 125
Query: 528 LVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+VH NL E +L+ + L+D GL + D + + GYL+PE
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP--GYLSPEVLKKDP 183
Query: 585 FTEKSDIYAFGMIVFQILSG 604
+++ DI+A G+I++ +L G
Sbjct: 184 YSKPVDIWACGVILYILLVG 203
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 23/220 (10%)
Query: 402 QCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSC---KSDEGEFLKGLKI 452
+CF +LGK + ++ +R G + A+K + K D I
Sbjct: 17 ECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 453 LTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIK 512
L +KH + L I + G+ +LI +++ G L L+ E + T +
Sbjct: 75 LEEVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMEDTACFYLA 128
Query: 513 GIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAM 572
I+ + +LH K G+++ +L E ++++ + + L+D GL K D + +
Sbjct: 129 EISMALGHLHQK--GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH-TFCGTI 185
Query: 573 GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFT 612
Y+APE D ++ G +++ +L+G PFT
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA---PPFT 222
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504
E L ++ L + + + GIC ++ L+ + G L ++L + ++
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAES---WMLVMEMAELGPLNKYLQ----QNRHVKD 469
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVF 563
I ++ ++ G+ YL + VH +L+A VL+ ++ +SD GL K L AD+ +
Sbjct: 470 KNIIELVHQVSMGMKYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 564 -SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + APE +F+ KSD+++FG+++++ S
Sbjct: 528 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 23/220 (10%)
Query: 402 QCFSEANLLGKSSFSATYKGILRD------GSVVAVKCIAKTSC---KSDEGEFLKGLKI 452
+CF +LGK + ++ +R G + A+K + K D I
Sbjct: 17 ECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 453 LTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIK 512
L +KH + L I + G+ +LI +++ G L L+ E + T +
Sbjct: 75 LEEVKHPFIVDL--IYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMEDTACFYLA 128
Query: 513 GIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAM 572
I+ + +LH K G+++ +L E ++++ + + L+D GL K D + +
Sbjct: 129 EISMALGHLHQK--GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH-XFCGTI 185
Query: 573 GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFT 612
Y+APE D ++ G +++ +L+G PFT
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA---PPFT 222
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGILRDGS----VVAVKCIAKTSCK-SDEGEFLKGLKILTSLKH 458
F +LG+ SF + GS + A+K + K + K D IL + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAG-SEKVLEWATRISVIKGIAKG 517
+ L ++G+ +LI DF+ G+L L E +E+ +++ + +A
Sbjct: 86 PFIVKLHYAFQTEGK--LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALA 138
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---Y 574
+ +LH G+++ +L E +L+ + L+D GL K D KA + G Y
Sbjct: 139 LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID----HEKKAYSFCGTVEY 192
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
+APE T+ +D ++FG+++F++L+G
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 410 LGKSSFSATYKGILRD-GSVVAVK-CIAKTSCKSDEGEFLKGLKILTSLKHENLASLR-- 465
LG F + I +D G VA+K C + S K+ E L+ ++I+ L H N+ S R
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLE-IQIMKKLNHPNVVSAREV 81
Query: 466 --GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
G+ L ++ G+L ++L+ + E R +++ I+ + YLH
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSALRYLHE 140
Query: 524 KRPGLVHPNLSAEKVLIH---RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYT 580
R ++H +L E +++ +R + D G K L + + + + YLAPE
Sbjct: 141 NR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT--EFVGTLQYLAPELL 196
Query: 581 TTGRFTEKSDIYAFGMIVFQILSG 604
++T D ++FG + F+ ++G
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 15/204 (7%)
Query: 410 LGKSSFSATYKGILRD-GSVVAVK-CIAKTSCKSDEGEFLKGLKILTSLKHENLASLR-- 465
LG F + I +D G VA+K C + S K+ E L+ ++I+ L H N+ S R
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLE-IQIMKKLNHPNVVSAREV 80
Query: 466 --GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHG 523
G+ L ++ G+L ++L+ + E R +++ I+ + YLH
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR-TLLSDISSALRYLHE 139
Query: 524 KRPGLVHPNLSAEKVLIH---RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYT 580
R ++H +L E +++ +R + D G K L + + + + YLAPE
Sbjct: 140 NR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT--EFVGTLQYLAPELL 195
Query: 581 TTGRFTEKSDIYAFGMIVFQILSG 604
++T D ++FG + F+ ++G
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 430 AVKCIAKTSCK-SDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
A+K I KTS S + L+ + +L L H N+ L K +L+ + G L
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRN--YYLVMECYKGGEL 123
Query: 489 LQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLL 548
+ +V +IK + G++YLH + +VH +L E +L+ + L
Sbjct: 124 FDEIIHRMKFNEV----DAAVIIKQVLSGVTYLH--KHNIVHRDLKPENLLLESKEKDAL 177
Query: 549 ---SDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
D GL + + M + Y+APE ++ EK D+++ G+I+F +L+G
Sbjct: 178 IKIVDFGLSAVFENQK--KMKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 410 LGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEG---EFLKGLKILTSLKHENLASLR 465
+G+ +F +K R G VA+K + + K EG L+ +KIL LKHEN+ +L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 466 GICCSKG------RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAK--- 516
IC +K +G +L++DF + DL VL T +S IK + +
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEH-------DLAGLLSNVLVKFT-LSEIKRVMQMLL 135
Query: 517 -GISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGY 574
G+ Y+H R ++H ++ A VLI R L+D GL + FS+ K S Y
Sbjct: 136 NGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLAR------AFSLAKNSQPNRY 186
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 100/242 (41%), Gaps = 40/242 (16%)
Query: 411 GKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS 470
+ F +K L + VAVK +S + E+ + L +KHEN+ G +
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIG---A 86
Query: 471 KGRG-----ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH--- 522
+ RG + +LI F G+L L V+ W + + +A+G++YLH
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDI 141
Query: 523 -----GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLH-KLLADDIVFSMLKASAAMGYLA 576
G +P + H ++ ++ VL+ ++D GL K A Y+A
Sbjct: 142 PGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMA 201
Query: 577 PEYTTTGRFTEKS-----DIYAFGMIVFQILSGKCS---------ITPFTRQAAESSKVE 622
PE ++ D+YA G+++++ L+ +C+ + PF + + +E
Sbjct: 202 PEVLEGAINFQRDAFLRIDMYAMGLVLWE-LASRCTAADGPVDEYMLPFEEEIGQHPSLE 260
Query: 623 DF 624
D
Sbjct: 261 DM 262
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGILRDGS----VVAVKCIAKTSCK-SDEGEFLKGLKILTSLKH 458
F +LG+ SF + GS + A+K + K + K D IL + H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAG-SEKVLEWATRISVIKGIAKG 517
+ L + G+ +LI DF+ G+L L E +E+ +++ + +A
Sbjct: 87 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALA 139
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---Y 574
+ +LH G+++ +L E +L+ + L+D GL K D KA + G Y
Sbjct: 140 LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID----HEKKAYSFCGTVEY 193
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
+APE T+ +D ++FG+++F++L+G
Sbjct: 194 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 404 FSEANLLGKSSFSATYKGILRDGS----VVAVKCIAKTSCKSDEGEFLKGLK-ILTSLKH 458
F +LG+ SF + GS + A+K + K + K + K + IL + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 459 ENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAG-SEKVLEWATRISVIKGIAKG 517
+ L + G+ +LI DF+ G+L L E +E+ +++ + +A
Sbjct: 86 PFIVKLH--YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-----YLAELALA 138
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---Y 574
+ +LH G+++ +L E +L+ + L+D GL K D KA + G Y
Sbjct: 139 LDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID----HEKKAYSFCGTVEY 192
Query: 575 LAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
+APE T+ +D ++FG+++F++L+G
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504
E L ++ L + + + GIC ++ L+ + G L ++L + ++
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAES---WMLVMEMAELGPLNKYLQ----QNRHVKD 126
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVF 563
I ++ ++ G+ YL + VH +L+A VL+ ++ +SD GL K L AD+ +
Sbjct: 127 KNIIELVHQVSMGMKYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 564 -SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + APE +F+ KSD+++FG+++++ S
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504
E L ++ L + + + GIC ++ L+ + G L ++L + ++
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAES---WMLVMEMAELGPLNKYLQ----QNRHVKD 126
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVF 563
I ++ ++ G+ YL + VH +L+A VL+ ++ +SD GL K L AD+ +
Sbjct: 127 KNIIELVHQVSMGMKYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 564 -SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + APE +F+ KSD+++FG+++++ S
Sbjct: 185 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504
E L ++ L + + + GIC ++ L+ + G L ++L + ++
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEAES---WMLVMEMAELGPLNKYLQ----QNRHVKD 124
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVF 563
I ++ ++ G+ YL + VH +L+A VL+ ++ +SD GL K L AD+ +
Sbjct: 125 KNIIELVHQVSMGMKYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 564 -SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + APE +F+ KSD+++FG+++++ S
Sbjct: 183 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504
E L ++ L + + + GIC ++ L+ + G L ++L + ++
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEAES---WMLVMEMAELGPLNKYLQ----QNRHVKD 104
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVF 563
I ++ ++ G+ YL + VH +L+A VL+ ++ +SD GL K L AD+ +
Sbjct: 105 KNIIELVHQVSMGMKYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 564 -SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + APE +F+ KSD+++FG+++++ S
Sbjct: 163 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 117/276 (42%), Gaps = 66/276 (23%)
Query: 410 LGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEG---EFLKGLKILTSLKHENLASLR 465
+G+ +F +K R G VA+K + + K EG L+ +KIL LKHEN+ +L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 466 GICCSKG------RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAK--- 516
IC +K +G +L++DF + DL VL T +S IK + +
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEH-------DLAGLLSNVLVKFT-LSEIKRVMQMLL 135
Query: 517 -GISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKAS------ 569
G+ Y+H R ++H ++ A VLI R L+D GL + FS+ K S
Sbjct: 136 NGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLAR------AFSLAKNSQPNRYX 187
Query: 570 ---AAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI 625
+ Y PE R + D++ G I+ ++ +TR
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM---------WTRS----------- 227
Query: 626 DPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIEN 661
P ++G +E L I+ C +P P+++N
Sbjct: 228 -PIMQGN---TEQHQLALISQLCGSITPEVWPNVDN 259
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
Query: 399 RATQCFSEANLLGKSSFSATYK--GILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSL 456
R T+ + LGK +FS + +L A+ K D + + +I L
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 457 KHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAK 516
KH N+ L +G +LI+D V G L + + E E A I+ I +
Sbjct: 68 KHPNIVRLHDSISEEGHH--YLIFDLVTGGELFEDI---VAREYYSE-ADASHCIQQILE 121
Query: 517 GISYLHGKRPGLVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMG 573
+ LH + G+VH NL E +L+ + L+D GL + + + + G
Sbjct: 122 AV--LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGL-AIEVEGEQQAWFGFAGTPG 178
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
YL+PE + + D++A G+I++ +L G
Sbjct: 179 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 408 NLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLK----ILTSLKHENLA 462
++GK +FS + I R+ G AVK + S G + LK I LKH ++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH 522
L S G +++++F+ +L + A + V A ++ I + + Y H
Sbjct: 90 ELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 523 GKRPGLVHPNLSAEKVLIHRRYN--PL-LSDSGLHKLLADDIVFSMLKASAAMG---YLA 576
++H ++ E VL+ + N P+ L D G+ L + S L A +G ++A
Sbjct: 148 DN--NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE----SGLVAGGRVGTPHFMA 201
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILSG 604
PE + + D++ G+I+F +LSG
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504
E L ++ L + + + GIC ++ L+ + G L ++L + ++
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAES---WMLVMEMAELGPLNKYLQ----QNRHVKD 110
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVF 563
I ++ ++ G+ YL + VH +L+A VL+ ++ +SD GL K L AD+ +
Sbjct: 111 KNIIELVHQVSMGMKYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 564 -SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + APE +F+ KSD+++FG+++++ S
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504
E L ++ L + + + GIC ++ L+ + G L ++L + ++
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAES---WMLVMEMAELGPLNKYLQ----QNRHVKD 110
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVF 563
I ++ ++ G+ YL + VH +L+A VL+ ++ +SD GL K L AD+ +
Sbjct: 111 KNIIELVHQVSMGMKYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 564 -SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + APE +F+ KSD+++FG+++++ S
Sbjct: 169 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504
E L ++ L + + + GIC ++ L+ + G L ++L + ++
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEAES---WMLVMEMAELGPLNKYLQ----QNRHVKD 116
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVF 563
I ++ ++ G+ YL + VH +L+A VL+ ++ +SD GL K L AD+ +
Sbjct: 117 KNIIELVHQVSMGMKYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 564 -SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + APE +F+ KSD+++FG+++++ S
Sbjct: 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504
E L ++ L + + + GIC ++ L+ + G L ++L + ++
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEAES---WMLVMEMAELGPLNKYLQ----QNRHVKD 106
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLL-ADDIVF 563
I ++ ++ G+ YL + VH +L+A VL+ ++ +SD GL K L AD+ +
Sbjct: 107 KNIIELVHQVSMGMKYL--EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 564 -SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILS 603
+ + + APE +F+ KSD+++FG+++++ S
Sbjct: 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 436 KTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLE 495
K S KS +F L+I+T +K+E + GI E ++IY+++ N ++L+ +
Sbjct: 80 KISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT--NYDEVYIIYEYMENDSILKFDEYF 137
Query: 496 AGSEKVLEWATRISVIKGIAKGI----SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDS 551
+K I VIK I K + SY+H ++ + H ++ +L+ + LSD
Sbjct: 138 FVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK-NICHRDVKPSNILMDKNGRVKLSDF 196
Query: 552 GLHKLLADDIVFSMLKAS-AAMGYLAPEYTT--TGRFTEKSDIYAFGMIVFQILSGKCSI 608
G + + D +K S ++ PE+ + + K DI++ G+ ++ + +
Sbjct: 197 GESEYMVD----KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYN---V 249
Query: 609 TPFTRQAA 616
PF+ + +
Sbjct: 250 VPFSLKIS 257
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 117/276 (42%), Gaps = 66/276 (23%)
Query: 410 LGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEG---EFLKGLKILTSLKHENLASLR 465
+G+ +F +K R G VA+K + + K EG L+ +KIL LKHEN+ +L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 82
Query: 466 GICCSKG------RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAK--- 516
IC +K +G +L++DF + DL VL T +S IK + +
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEH-------DLAGLLSNVLVKFT-LSEIKRVMQMLL 134
Query: 517 -GISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKAS------ 569
G+ Y+H R ++H ++ A VLI R L+D GL + FS+ K S
Sbjct: 135 NGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLAR------AFSLAKNSQPNRYX 186
Query: 570 ---AAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI 625
+ Y PE R + D++ G I+ ++ +TR
Sbjct: 187 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM---------WTRS----------- 226
Query: 626 DPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIEN 661
P ++G +E L I+ C +P P+++N
Sbjct: 227 -PIMQGN---TEQHQLALISQLCGSITPEVWPNVDN 258
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 402 QCFSEANLLGKSSFSATYKGI-LRDGSVVAVKCI-AKTSCKSDEGEFLKGLKILTSLKHE 459
Q F E LGK +FS + + + G A K I K D + + +I LKH
Sbjct: 25 QLFEE---LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 81
Query: 460 NLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGIS 519
N+ L +G +LI+D V G L + + E E A I+ I + +
Sbjct: 82 NIVRLHDSISEEGHH--YLIFDLVTGGELFEDI---VAREYYSE-ADASHCIQQILEAV- 134
Query: 520 YLHGKRPGLVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLA 576
LH + G+VH +L E +L+ + L+D GL + + + + GYL+
Sbjct: 135 -LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGL-AIEVEGEQQAWFGFAGTPGYLS 192
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILSG 604
PE + + D++A G+I++ +L G
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 27/235 (11%)
Query: 392 FNLEEVERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDE-----GE 445
F E+VE + E LG F+ K + G A K I K S E
Sbjct: 5 FRQEDVEDHYEMGEE---LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREE 61
Query: 446 FLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLE-W 504
+ + IL ++H N+ +L I +K + LI + V G L D A E + E
Sbjct: 62 IEREVNILREIRHPNIITLHDIFENKT--DVVLILELVSGGELF---DFLAEKESLTEDE 116
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNP----LLSDSGL-HKLLAD 559
AT+ +K I G+ YLH KR + H +L E +++ + P L D G+ HK+ A
Sbjct: 117 ATQF--LKQILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 172
Query: 560 DIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQ 614
+ ++ ++APE ++D+++ G+I + +LSG T+Q
Sbjct: 173 NEFKNIFGTPE---FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 477 FLIYDFVPNGNLLQHLDLEAGSEKVL--EWATRISVIKGIAKGISYLHGKRPGLVHPNLS 534
FL++D + G L +L +EKV E TR S+++ + + +S+LH +VH +L
Sbjct: 176 FLVFDLMRKGELFDYL-----TEKVALSEKETR-SIMRSLLEAVSFLHAN--NIVHRDLK 227
Query: 535 AEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEY------TTTGRFTEK 588
E +L+ LSD G L L + GYLAPE T + ++
Sbjct: 228 PENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTP--GYLAPEILKCSMDETHPGYGKE 285
Query: 589 SDIYAFGMIVFQILSG 604
D++A G+I+F +L+G
Sbjct: 286 VDLWACGVILFTLLAG 301
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 39/240 (16%)
Query: 399 RATQCFSEANLLGKSSFSATYKGI-LRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK 457
R F E +LG+ +F K D A+K I T K L + +L SL
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVMLLASLN 60
Query: 458 HENLAS-----------LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWAT 506
H+ + ++ + K + F+ ++ N L + E +++ E+
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW- 119
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+ + I + +SY+H + G++H +L + I N + D GL K + + L
Sbjct: 120 --RLFRQILEALSYIHSQ--GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 567 KA----------SAAMG---YLAPEYTT-TGRFTEKSDIYAFGMIVFQILSGKCSITPFT 612
+ ++A+G Y+A E TG + EK D+Y+ G+I F++ I PF+
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM------IYPFS 229
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 97/240 (40%), Gaps = 39/240 (16%)
Query: 399 RATQCFSEANLLGKSSFSATYKGI-LRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLK 457
R F E +LG+ +F K D A+K I T K L + +L SL
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL--STILSEVXLLASLN 60
Query: 458 HENLAS-----------LRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWAT 506
H+ + ++ K + F+ ++ N L + E +++ E+
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW- 119
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
+ + I + +SY+H + G++H NL + I N + D GL K + + L
Sbjct: 120 --RLFRQILEALSYIHSQ--GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 567 KA----------SAAMG---YLAPEYTT-TGRFTEKSDIYAFGMIVFQILSGKCSITPFT 612
+ ++A+G Y+A E TG + EK D Y+ G+I F+ I PF+
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE------XIYPFS 229
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
Query: 410 LGKSSFSATYKGI-LRDGSVVAVKCI-AKTSCKSDEGEFLKGLKILTSLKHENLASLRGI 467
+GK +FS + + L G A K I K D + + +I LKH N+ L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 468 CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPG 527
+G +L++D V G L + + E E A I+ I + + LH + G
Sbjct: 72 ISEEGFH--YLVFDLVTGGELFEDI---VAREYYSE-ADASHCIQQILEAV--LHCHQMG 123
Query: 528 LVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
+VH +L E +L+ + L+D GL + D + + GYL+PE
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLSPEVLRKEA 182
Query: 585 FTEKSDIYAFGMIVFQILSG 604
+ + DI+A G+I++ +L G
Sbjct: 183 YGKPVDIWACGVILYILLVG 202
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 23/200 (11%)
Query: 426 GSVVAVKCIAKTSCKSDEG-----EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K S E + + IL ++H N+ +L I +K + LI
Sbjct: 30 GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVVLIL 87
Query: 481 DFVPNGNLLQHLDLEAGSEKVLE-WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVL 539
+ V G L D A E + E AT+ +K I G+ YLH KR + H +L E ++
Sbjct: 88 ELVSGGELF---DFLAEKESLTEDEATQF--LKQILDGVHYLHSKR--IAHFDLKPENIM 140
Query: 540 IHRRYNP----LLSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
+ + P L D G+ HK+ A + ++ ++APE ++D+++
Sbjct: 141 LLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE---FVAPEIVNYEPLGLEADMWSI 197
Query: 595 GMIVFQILSGKCSITPFTRQ 614
G+I + +LSG T+Q
Sbjct: 198 GVITYILLSGASPFLGETKQ 217
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 23/200 (11%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K S E + + IL ++H N+ +L I +K + LI
Sbjct: 51 GKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--DVVLIL 108
Query: 481 DFVPNGNLLQHLDLEAGSEKVLE-WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVL 539
+ V G L D A E + E AT+ +K I G+ YLH KR + H +L E ++
Sbjct: 109 ELVSGGELF---DFLAEKESLTEDEATQF--LKQILDGVHYLHSKR--IAHFDLKPENIM 161
Query: 540 IHRRYNP----LLSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAF 594
+ + P L D G+ HK+ A + ++ ++APE ++D+++
Sbjct: 162 LLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPE---FVAPEIVNYEPLGLEADMWSI 218
Query: 595 GMIVFQILSGKCSITPFTRQ 614
G+I + +LSG T+Q
Sbjct: 219 GVITYILLSGASPFLGETKQ 238
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 11/147 (7%)
Query: 478 LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEK 537
LI D++ G L HL + E+ E +I V + I + +LH + G+++ ++ E
Sbjct: 136 LILDYINGGELFTHL---SQRERFTEHEVQIYVGE-IVLALEHLH--KLGIIYRDIKLEN 189
Query: 538 VLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR--FTEKSDIYAFG 595
+L+ + +L+D GL K D + Y+AP+ G + D ++ G
Sbjct: 190 ILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249
Query: 596 MIVFQILSGKCSITPFTRQAAESSKVE 622
++++++L+G +PFT ++S+ E
Sbjct: 250 VLMYELLTGA---SPFTVDGEKNSQAE 273
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 34/249 (13%)
Query: 430 AVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLL 489
AVK I K+ K D E ++ L L +H N+ +L+ + G+ +L+ + + G LL
Sbjct: 56 AVKVIDKS--KRDPSEEIEIL--LRYGQHPNIITLKDVY-DDGK-HVYLVTELMRGGELL 109
Query: 490 QHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNP-- 546
+ +K V+ I K + YLH + G+VH +L +L + NP
Sbjct: 110 DKI----LRQKFFSEREASFVLHTIGKTVEYLHSQ--GVVHRDLKPSNILYVDESGNPEC 163
Query: 547 -LLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK 605
+ D G K L + M A ++APE + E DI++ G++++ +L+G
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTA-NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG- 221
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVS---------EASNLGQIALHCTHESPSHR 656
TPF +++ E+ + GKF++S A +L LH P R
Sbjct: 222 --YTPFANGPSDTP--EEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHV---DPHQR 274
Query: 657 PSIENVMQE 665
+ + V+Q
Sbjct: 275 LTAKQVLQH 283
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 34/248 (13%)
Query: 430 AVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLL 489
AVK I K+ K D E ++ L L +H N+ +L+ + G+ +L+ + + G LL
Sbjct: 56 AVKVIDKS--KRDPSEEIEIL--LRYGQHPNIITLKDVY-DDGK-HVYLVTELMRGGELL 109
Query: 490 QHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNP-- 546
+ +K V+ I K + YLH + G+VH +L +L + NP
Sbjct: 110 DKI----LRQKFFSEREASFVLHTIGKTVEYLHSQ--GVVHRDLKPSNILYVDESGNPEC 163
Query: 547 -LLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK 605
+ D G K L + M A ++APE + E DI++ G++++ +L+G
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTA-NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG- 221
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVS---------EASNLGQIALHCTHESPSHR 656
TPF +++ E+ + GKF++S A +L LH P R
Sbjct: 222 --YTPFANGPSDTP--EEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHV---DPHQR 274
Query: 657 PSIENVMQ 664
+ + V+Q
Sbjct: 275 LTAKQVLQ 282
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 66/276 (23%)
Query: 410 LGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEG---EFLKGLKILTSLKHENLASLR 465
+G+ +F +K R G VA+K + + K EG L+ +KIL LKHEN+ +L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLI 83
Query: 466 GICCSKG------RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAK--- 516
IC +K + +L++DF + DL VL T +S IK + +
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEH-------DLAGLLSNVLVKFT-LSEIKRVMQMLL 135
Query: 517 -GISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKAS------ 569
G+ Y+H R ++H ++ A VLI R L+D GL + FS+ K S
Sbjct: 136 NGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLAR------AFSLAKNSQPNRYX 187
Query: 570 ---AAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFI 625
+ Y PE R + D++ G I+ ++ +TR
Sbjct: 188 NRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM---------WTRS----------- 227
Query: 626 DPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIEN 661
P ++G +E L I+ C +P P+++N
Sbjct: 228 -PIMQGN---TEQHQLALISQLCGSITPEVWPNVDN 259
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 402 QCFSEANLLGKSSFSATYKGI-LRDGSVVAVKCI-AKTSCKSDEGEFLKGLKILTSLKHE 459
Q F E LGK +FS + + + G A K I K D + + +I LKH
Sbjct: 7 QLFEE---LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 460 NLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGIS 519
N+ L +G +L++D V G L + + E E A I+ I + ++
Sbjct: 64 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDI---VAREYYSE-ADASHCIQQILESVN 117
Query: 520 YLHGKRPGLVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLA 576
+ H G+VH +L E +L+ + L+D GL + D + + GYL+
Sbjct: 118 HCHLN--GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLS 174
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILSG 604
PE + + D++A G+I++ +L G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 16/217 (7%)
Query: 410 LGKSSFSATYKGILRDGS-VVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
LG+ SFS K + + + AVK I+K + + E + LK+ H N+ L +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKE-ITALKLCEG--HPNIVKLHEVF 75
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
+ FL+ + + G L + + +K +++ + +S++H G+
Sbjct: 76 --HDQLHTFLVMELLNGGELFERIK----KKKHFSETEASYIMRKLVSAVSHMHD--VGV 127
Query: 529 VHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
VH +L E +L + L + D G +L D + + Y APE +
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-PLKTPCFTLHYAAPELLNQNGY 186
Query: 586 TEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE 622
E D+++ G+I++ +LSG+ R +S VE
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE 223
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 387 LESFMFNLEEV-ERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEG 444
LE+F+ ++V E F + + LG + +K + G V+A K I +
Sbjct: 52 LEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN 111
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGS--EKVL 502
+ ++ L++L + G S G E + + + G+L Q L +AG E++L
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEHMDGGSLDQVLK-KAGRIPEQIL 168
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIV 562
++S+ + KG++YL K ++H ++ +L++ R L D G+ L D +
Sbjct: 169 ---GKVSI--AVIKGLTYLREKH-KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 222
Query: 563 FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITP 610
S + + Y++PE ++ +SDI++ G+ + ++ G+ I P
Sbjct: 223 NSFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 402 QCFSEANLLGKSSFSATYKGI-LRDGSVVAVKCI-AKTSCKSDEGEFLKGLKILTSLKHE 459
Q F E LGK +FS + + + G A K I K D + + +I LKH
Sbjct: 7 QLFEE---LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 460 NLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGIS 519
N+ L +G +L++D V G L + + E E A I+ I + ++
Sbjct: 64 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDI---VAREYYSE-ADASHCIQQILESVN 117
Query: 520 YLHGKRPGLVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLA 576
+ H G+VH +L E +L+ + L+D GL + D + + GYL+
Sbjct: 118 HCHLN--GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLS 174
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILSG 604
PE + + D++A G+I++ +L G
Sbjct: 175 PEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 98/215 (45%), Gaps = 22/215 (10%)
Query: 402 QCFSEANLLGKSSFSATYKGILR---DGSVVAVKCIAK-TSCKSDEGEFLKGLKILTSL- 456
Q F LG SF + ++R +G A+K + K + + E +++ S+
Sbjct: 6 QDFQILRTLGTGSFGRVH--LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 457 KHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAK 516
H + + G + + F+I D++ G L L S++ + + +
Sbjct: 64 THPFIIRMWG--TFQDAQQIFMIMDYIEGGELFSLL---RKSQRFPNPVAKFYAAE-VCL 117
Query: 517 GISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLA 576
+ YLH K +++ +L E +L+ + + ++D G K + D + + + Y+A
Sbjct: 118 ALEYLHSK--DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-VTYXL---CGTPDYIA 171
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
PE +T + + D ++FG++++++L+G TPF
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAG---YTPF 203
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 489 LQHLDLEAGS-EKVLEWATRI------SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
++H+D GS ++VL+ A RI V + +G++YL K ++H ++ +L++
Sbjct: 93 MEHMD--GGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH-QIMHRDVKPSNILVN 149
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
R L D G+ L D + S + + Y+APE ++ +SDI++ G+ + ++
Sbjct: 150 SRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMAPERLQGTHYSVQSDIWSMGLSLVEL 206
Query: 602 LSGKCSITP 610
G+ I P
Sbjct: 207 AVGRYPIPP 215
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 112/277 (40%), Gaps = 57/277 (20%)
Query: 411 GKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS 470
+ F +K L + VAVK +S + E + + +KHENL L+ I
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQSE--REIFSTPGMKHENL--LQFIAAE 78
Query: 471 KGRG-----ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH--- 522
K RG E +LI F G+L +L ++ W V + +++G+SYLH
Sbjct: 79 K-RGSNLEVELWLITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDV 132
Query: 523 ------GKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLK-------AS 569
G +P + H + ++ VL+ +L+D GL + F K
Sbjct: 133 PWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGL------AVRFEPGKPPGDTHGQV 186
Query: 570 AAMGYLAPEYTTTGRFTEKS-----DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDF 624
Y+APE ++ D+YA G+++++++S R A V+++
Sbjct: 187 GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS---------RCKAADGPVDEY 237
Query: 625 IDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIEN 661
+ P E L ++ +H RP+I++
Sbjct: 238 MLPFEEEIGQHPSLEELQEVVVH-----KKMRPTIKD 269
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 120/300 (40%), Gaps = 49/300 (16%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENLASL--R 465
+GK + ++G L G VAVK + DE + + +I + L+H+N+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSS----RDEQSWFRETEIYNTVLLRHDNILGFIAS 70
Query: 466 GICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK- 524
+ + +LI + +G+L L + + A R++V A G+++LH +
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL---ALRLAV--SAACGLAHLHVEI 125
Query: 525 -----RPGLVHPNLSAEKVLIHRRYNPLLSDSGL---HKLLADDIVFSMLKASAAMGYLA 576
+P + H + + VL+ ++D GL H +D + Y+A
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 577 PEY------TTTGRFTEKSDIYAFGMIVFQILSGKCSIT---------PFTRQAAESSKV 621
PE T + +DI+AFG+++++I + +I PF
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVEDYRPPFYDVVPNDPSF 243
Query: 622 EDF-----ID---PNLEGKFSVSEA-SNLGQIALHCTHESPSHRPSIENVMQELSSIIGS 672
ED +D P + + + S L Q+ C + +PS R + + + L I S
Sbjct: 244 EDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKISNS 303
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 126/302 (41%), Gaps = 59/302 (19%)
Query: 410 LGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTS--LKHENL-----A 462
+GK + + G R G VAVK T +E + + +I + ++HEN+ A
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAA 99
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLD---LEAGSEKVLEWATRISVIKGIAKGIS 519
++G + + +LI D+ NG+L +L L+A S L +++ G+
Sbjct: 100 DIKG---TGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSS--------VSGLC 148
Query: 520 YLHGK------RPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG 573
+LH + +P + H +L ++ +L+ + ++D GL D + + +G
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVG 208
Query: 574 ---YLAPEYT----TTGRFTE--KSDIYAFGMIVFQILSGKC--------SITPFTRQAA 616
Y+ PE F +D+Y+FG+I++++ + +C P+
Sbjct: 209 TKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV-ARRCVSGGIVEEYQLPYHDLVP 267
Query: 617 ESSKVEDF--------IDPNLEGKFSVSEA-SNLGQIALHCTHESPSHRPSIENVMQELS 667
ED + P+ ++S E +G++ C +P+ R + V + L+
Sbjct: 268 SDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327
Query: 668 SI 669
+
Sbjct: 328 KM 329
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 19/185 (10%)
Query: 430 AVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLL 489
A+K + KT D+ + +L L H N+ L+ I + E L+ + V G L
Sbjct: 82 ALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT--EISLVLELVTGGELF 136
Query: 490 QHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY--NPL 547
+ +E G + A +K I + ++YLH G+VH +L E +L PL
Sbjct: 137 DRI-VEKGYYSERDAA---DAVKQILEAVAYLHEN--GIVHRDLKPENLLYATPAPDAPL 190
Query: 548 -LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKC 606
++D GL K++ ++ M GY APE + + D+++ G+I + +L C
Sbjct: 191 KIADFGLSKIVEHQVL--MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL---C 245
Query: 607 SITPF 611
PF
Sbjct: 246 GFEPF 250
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 21/221 (9%)
Query: 404 FSEANLLGKSSFSATYKGILRDGSVV-AVKCIAKTSC--KSDEGEFLKGLKIL-TSLKHE 459
F ++GK SF + V AVK + K + K +E + +L ++KH
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 460 NLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGIS 519
L L + + + + D++ G L HL E LE R + IA +
Sbjct: 100 FLVGLH--FSFQTADKLYFVLDYINGGELFYHLQRERC---FLEPRARFYAAE-IASALG 153
Query: 520 YLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKAS--AAMGYLAP 577
YLH +V+ +L E +L+ + + +L+D GL K ++I + ++ YLAP
Sbjct: 154 YLHSL--NIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAP 208
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF-TRQAAE 617
E + D + G +++++L G + PF +R AE
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYG---LPPFYSRNTAE 246
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 106/228 (46%), Gaps = 16/228 (7%)
Query: 387 LESFMFNLEEV-ERATQCFSEANLLGKSSFSATYKGILR-DGSVVAVKCIAKTSCKSDEG 444
LE+F+ ++V E F + + LG + +K + G V+A K I +
Sbjct: 17 LEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN 76
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGS--EKVL 502
+ ++ L++L + G S G E + + + G+L Q L +AG E++L
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDG--EISICMEHMDGGSLDQVLK-KAGRIPEQIL 133
Query: 503 EWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIV 562
++S+ + KG++YL K ++H ++ +L++ R L D G+ L D +
Sbjct: 134 ---GKVSI--AVIKGLTYLREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA 187
Query: 563 FSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITP 610
S + + Y++PE ++ +SDI++ G+ + ++ G+ I P
Sbjct: 188 NSFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 67/176 (38%), Gaps = 2/176 (1%)
Query: 47 NADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIP 106
N+ CSS + + + LQ LS A L L LYL+ N L +
Sbjct: 19 NSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78
Query: 107 KEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVL 166
L L L++ N L + NL L+L N+L P SL KL+ L
Sbjct: 79 GIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYL 138
Query: 167 ALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPV-KLANVPKLEVLDIRNNSF 221
+L YN+L ++P +NN VP + +L+ L + NN
Sbjct: 139 SLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL 193
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 489 LQHLDLEAGS-EKVLEWATRI------SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
++H+D GS ++VL+ A RI V + KG++YL K ++H ++ +L++
Sbjct: 83 MEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH-KIMHRDVKPSNILVN 139
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
R L D G+ L D + S + + Y++PE ++ +SDI++ G+ + ++
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 602 LSGKCSITP 610
G+ I P
Sbjct: 197 AVGRYPIPP 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 489 LQHLDLEAGS-EKVLEWATRI------SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
++H+D GS ++VL+ A RI V + KG++YL K ++H ++ +L++
Sbjct: 83 MEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN 139
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
R L D G+ L D + S + + Y++PE ++ +SDI++ G+ + ++
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 602 LSGKCSITP 610
G+ I P
Sbjct: 197 AVGRYPIPP 205
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 489 LQHLDLEAGS-EKVLEWATRI------SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
++H+D GS ++VL+ A RI V + KG++YL K ++H ++ +L++
Sbjct: 83 MEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN 139
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
R L D G+ L D + S + + Y++PE ++ +SDI++ G+ + ++
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 602 LSGKCSITP 610
G+ I P
Sbjct: 197 AVGRYPIPP 205
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 489 LQHLDLEAGS-EKVLEWATRI------SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
++H+D GS ++VL+ A RI V + KG++YL K ++H ++ +L++
Sbjct: 83 MEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN 139
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
R L D G+ L D + S + + Y++PE ++ +SDI++ G+ + ++
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 602 LSGKCSITP 610
G+ I P
Sbjct: 197 AVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 489 LQHLDLEAGS-EKVLEWATRI------SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
++H+D GS ++VL+ A RI V + KG++YL K ++H ++ +L++
Sbjct: 83 MEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN 139
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
R L D G+ L D + S + + Y++PE ++ +SDI++ G+ + ++
Sbjct: 140 SRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEM 196
Query: 602 LSGKCSITP 610
G+ I P
Sbjct: 197 AVGRYPIPP 205
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 109/241 (45%), Gaps = 19/241 (7%)
Query: 430 AVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLL 489
+K I K + + +++L SL H N+ + + + +++ + G LL
Sbjct: 51 VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF--EDYHNMYIVMETCEGGELL 108
Query: 490 QHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR--YNPL 547
+ + K L ++K + ++Y H + +VH +L E +L ++P+
Sbjct: 109 ERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPI 166
Query: 548 -LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKC 606
+ D GL +L D S A A+ Y+APE T K DI++ G++++ +L+G C
Sbjct: 167 KIIDFGLAELFKSD-EHSTNAAGTAL-YMAPEVFKRD-VTFKCDIWSAGVVMYFLLTG-C 222
Query: 607 SITPFTRQAAESSKVE-DFIDPN--LEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 663
PFT + E + + + +PN +E + +A +L + L + P RPS V+
Sbjct: 223 --LPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQML---TKDPERRPSAAQVL 277
Query: 664 Q 664
Sbjct: 278 H 278
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 105 IPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLS 164
I I L+ LYLN N+L+ ++P++I N++NL+VL L +N+LT +P +LGS +L
Sbjct: 239 ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLK 296
Query: 165 VLALQYNQLT 174
N +T
Sbjct: 297 YFYFFDNMVT 306
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 67 VANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLS 126
+ + L G L+ E+PA + L +L L L N L +P E+ S +L Y +N+
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYF-FDNMV 305
Query: 127 GKIPSQIGNMTNLQVL 142
+P + GN+ NLQ L
Sbjct: 306 TTLPWEFGNLCNLQFL 321
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH-- 458
Q F ++G+ S++ L+ + A++ + K DE + + + KH
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDED-----IDWVQTEKHVF 106
Query: 459 ---ENLASLRGI-CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGI 514
N L G+ C + F + ++V G+L+ H+ + K+ E R + I
Sbjct: 107 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAE-I 162
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK--LLADDIVFSMLKASAAM 572
+ ++YLH + G+++ +L + VL+ + L+D G+ K L D +
Sbjct: 163 SLALNYLHER--GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF---CGTP 217
Query: 573 GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE + D +A G+++F++++G+ +PF
Sbjct: 218 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR---SPF 253
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 113/251 (45%), Gaps = 36/251 (14%)
Query: 423 LRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR--GICCSKGRGEC---- 476
LRD VAVK + + D +L+ + + +N A+L I GE
Sbjct: 34 LRDHRDVAVKVL-RADLARDPSFYLRFRR-----EAQNAAALNHPAIVAVYDTGEAETPA 87
Query: 477 ----FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+++ ++V +G L+ + +E + I VI + +++ H G++H +
Sbjct: 88 GPLPYIVMEYV-DGVTLRDI---VHTEGPMTPKRAIEVIADACQALNFSHQN--GIIHRD 141
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKS 589
+ ++I + D G+ + +AD S+ + +A +G YL+PE +S
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADS-GNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 590 DIYAFGMIVFQILSGKCSITPFTRQAAESSKV----EDFIDPNLEGKFSVSEASNLGQIA 645
D+Y+ G +++++L+G+ PFT + +S ED I P+ + +++L +
Sbjct: 201 DVYSLGCVLYEVLTGE---PPFTGDSPDSVAYQHVREDPIPPSARHE---GLSADLDAVV 254
Query: 646 LHCTHESPSHR 656
L ++P +R
Sbjct: 255 LKALAKNPENR 265
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH-- 458
Q F ++G+ S++ L+ + A+K + K DE + + + KH
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED-----IDWVQTEKHVF 63
Query: 459 ---ENLASLRGI-CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGI 514
N L G+ C + F + ++V G+L+ H+ + K+ E R + I
Sbjct: 64 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAE-I 119
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK--LLADDIVFSMLKASAAM 572
+ ++YLH + G+++ +L + VL+ + L+D G+ K L D
Sbjct: 120 SLALNYLHER--GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTP 174
Query: 573 GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE + D +A G+++F++++G+ +PF
Sbjct: 175 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR---SPF 210
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 404 FSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLK-GLKILTSLKHENL 461
FS ++G+ F Y D G + A+KC+ K K +GE L +I+ SL
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 462 ASLRGICCSKGR---GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGI 518
+C S + I D + G+L HL V A I G+
Sbjct: 250 CPF-IVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGL 304
Query: 519 SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAM---GYL 575
++H + +V+ +L +L+ + +SD G LA D FS K A++ GY+
Sbjct: 305 EHMHNR--FVVYRDLKPANILLDEHGHVRISDLG----LACD--FSKKKPHASVGTHGYM 356
Query: 576 APEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE 622
APE G + +D ++ G ++F++L G +PF RQ K E
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGH---SPF-RQHKTKDKHE 400
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 404 FSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLK-GLKILTSLKHENL 461
FS ++G+ F Y D G + A+KC+ K K +GE L +I+ SL
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 462 ASLRGICCSKGR---GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGI 518
+C S + I D + G+L HL V A I G+
Sbjct: 251 CPF-IVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGL 305
Query: 519 SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAM---GYL 575
++H + +V+ +L +L+ + +SD G LA D FS K A++ GY+
Sbjct: 306 EHMHNR--FVVYRDLKPANILLDEHGHVRISDLG----LACD--FSKKKPHASVGTHGYM 357
Query: 576 APEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE 622
APE G + +D ++ G ++F++L G +PF RQ K E
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGH---SPF-RQHKTKDKHE 401
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 16/210 (7%)
Query: 405 SEANLLGKSSFSATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASL 464
S+ +LG F +K + I KT D+ E + ++ L H NL L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 465 RGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
SK + L+ ++V G L + E+ + L+ I +K I +GI ++H
Sbjct: 152 YDAFESKN--DIVLVMEYVDGGELFDRIIDESYNLTELD---TILFMKQICEGIRHMH-- 204
Query: 525 RPGLVHPNLSAEKVL-IHRRYNPL-LSDSGLHKLLADDIVFSMLKASAAM-GYLAPEYTT 581
+ ++H +L E +L ++R + + D GL + LK + +LAPE
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR---EKLKVNFGTPEFLAPEVVN 261
Query: 582 TGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
+ +D+++ G+I + +LSG ++PF
Sbjct: 262 YDFVSFPTDMWSVGVIAYMLLSG---LSPF 288
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 93/203 (45%), Gaps = 29/203 (14%)
Query: 423 LRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR--GICCSKGRGEC---- 476
LRD VAVK + + D +L+ + + +N A+L I GE
Sbjct: 34 LRDHRDVAVKVL-RADLARDPSFYLRFRR-----EAQNAAALNHPAIVAVYDTGEAETPA 87
Query: 477 ----FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+++ ++V +G L+ + +E + I VI + +++ H G++H +
Sbjct: 88 GPLPYIVMEYV-DGVTLRDI---VHTEGPMTPKRAIEVIADACQALNFSHQN--GIIHRD 141
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKS 589
+ +LI + D G+ + +AD S+ + +A +G YL+PE +S
Sbjct: 142 VKPANILISATNAVKVVDFGIARAIADS-GNSVXQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 590 DIYAFGMIVFQILSGKCSITPFT 612
D+Y+ G +++++L+G+ PFT
Sbjct: 201 DVYSLGCVLYEVLTGE---PPFT 220
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH-- 458
Q F ++G+ S++ L+ + A+K + K DE + + + KH
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED-----IDWVQTEKHVF 59
Query: 459 ---ENLASLRGI-CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGI 514
N L G+ C + F + ++V G+L+ H+ + K+ E R + I
Sbjct: 60 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAE-I 115
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK--LLADDIVFSMLKASAAM 572
+ ++YLH + G+++ +L + VL+ + L+D G+ K L D
Sbjct: 116 SLALNYLHER--GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTP 170
Query: 573 GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE + D +A G+++F++++G+ +PF
Sbjct: 171 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR---SPF 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 402 QCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKH-- 458
Q F ++G+ S++ L+ + A+K + K DE + + + KH
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED-----IDWVQTEKHVF 74
Query: 459 ---ENLASLRGI-CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGI 514
N L G+ C + F + ++V G+L+ H+ + K+ E R + I
Sbjct: 75 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAE-I 130
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHK--LLADDIVFSMLKASAAM 572
+ ++YLH + G+++ +L + VL+ + L+D G+ K L D
Sbjct: 131 SLALNYLHER--GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXF---CGTP 185
Query: 573 GYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE + D +A G+++F++++G+ +PF
Sbjct: 186 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR---SPF 221
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 404 FSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLK-GLKILTSLKHENL 461
FS ++G+ F Y D G + A+KC+ K K +GE L +I+ SL
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 462 ASLRGICCSKGR---GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGI 518
+C S + I D + G+L HL V A I G+
Sbjct: 251 CPF-IVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGL 305
Query: 519 SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAM---GYL 575
++H + +V+ +L +L+ + +SD G LA D FS K A++ GY+
Sbjct: 306 EHMHNR--FVVYRDLKPANILLDEHGHVRISDLG----LACD--FSKKKPHASVGTHGYM 357
Query: 576 APEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE 622
APE G + +D ++ G ++F++L G +PF RQ K E
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGH---SPF-RQHKTKDKHE 401
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 404 FSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLK-GLKILTSLKHENL 461
FS ++G+ F Y D G + A+KC+ K K +GE L +I+ SL
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 462 ASLRGICCSKGR---GECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGI 518
+C S + I D + G+L HL V A I G+
Sbjct: 251 CPF-IVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILGL 305
Query: 519 SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAM---GYL 575
++H + +V+ +L +L+ + +SD G LA D FS K A++ GY+
Sbjct: 306 EHMHNR--FVVYRDLKPANILLDEHGHVRISDLG----LACD--FSKKKPHASVGTHGYM 357
Query: 576 APEYTTTG-RFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE 622
APE G + +D ++ G ++F++L G +PF RQ K E
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGH---SPF-RQHKTKDKHE 401
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 117/279 (41%), Gaps = 32/279 (11%)
Query: 404 FSEANLLGKSSFSAT---YKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN 460
F + N L K + + + +KG + +V + +F + L H N
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520
+ + G C S LI ++P G+L L G+ V++ + + +A+G+++
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWMPYGSLYN--VLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 521 LHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA--AMGYLAPE 578
LH P + L++ V+I +S + D+ FS A ++APE
Sbjct: 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMA--------DVKFSFQSPGRMYAPAWVAPE 178
Query: 579 Y-----TTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEG-- 631
T R +D+++F ++++++++ + PF A+ S +E + LEG
Sbjct: 179 ALQKKPEDTNR--RSADMWSFAVLLWELVTREV---PF----ADLSNMEIGMKVALEGLR 229
Query: 632 -KFSVSEASNLGQIALHCTHESPSHRPSIENVMQELSSI 669
+ ++ ++ C +E P+ RP + ++ L +
Sbjct: 230 PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 93/203 (45%), Gaps = 29/203 (14%)
Query: 423 LRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLR--GICCSKGRGEC---- 476
LRD VAVK + + D +L+ + + +N A+L I GE
Sbjct: 34 LRDHRDVAVKVL-RADLARDPSFYLRFRR-----EAQNAAALNHPAIVAVYDTGEAETPA 87
Query: 477 ----FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+++ ++V +G L+ + +E + I VI + +++ H G++H +
Sbjct: 88 GPLPYIVMEYV-DGVTLRDI---VHTEGPMTPKRAIEVIADACQALNFSHQN--GIIHRD 141
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKS 589
+ ++I + D G+ + +AD S+ + +A +G YL+PE +S
Sbjct: 142 VKPANIMISATNAVKVMDFGIARAIADS-GNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 590 DIYAFGMIVFQILSGKCSITPFT 612
D+Y+ G +++++L+G+ PFT
Sbjct: 201 DVYSLGCVLYEVLTGE---PPFT 220
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 404 FSEANLLGKSSF----------SATYKG--ILRDGSVVAVKCIAKTSCKSDEGEFLKGLK 451
F LLGK +F + Y ILR ++A +A T +S +
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES---------R 62
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVI 511
+L + +H L +L+ + R CF++ ++ G L HL E+V
Sbjct: 63 VLQNTRHPFLTALKYAFQTHDRL-CFVM-EYANGGELFFHL----SRERVFTEERARFYG 116
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
I + YLH + +V+ ++ E +++ + + ++D GL K D +M
Sbjct: 117 AEIVSALEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGT 173
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE 617
YLAPE + D + G+++++++ G+ PF Q E
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHE 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 404 FSEANLLGKSSF----------SATYKG--ILRDGSVVAVKCIAKTSCKSDEGEFLKGLK 451
F LLGK +F + Y ILR ++A +A T +S +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES---------R 57
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVI 511
+L + +H L +L+ + R CF++ ++ G L HL E+V
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRL-CFVM-EYANGGELFFHL----SRERVFTEERARFYG 111
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
I + YLH + +V+ ++ E +++ + + ++D GL K D +M
Sbjct: 112 AEIVSALEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGT 168
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE 617
YLAPE + D + G+++++++ G+ PF Q E
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHE 211
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 402 QCFSEANLLGKSSFSATYKGILRDGSV-VAVKCI-AKTSCKSDEGEFLKGLKILTSLKHE 459
Q F E LGK +FS + + + + A K I K D + + +I LKH
Sbjct: 34 QLFEE---LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 460 NLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGIS 519
N+ L +G +L++D V G L + + E E A I I + ++
Sbjct: 91 NIVRLHDSISEEGFH--YLVFDLVTGGELFEDI---VAREYYSE-ADASHCIHQILESVN 144
Query: 520 YLHGKRPGLVHPNLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLA 576
++H + +VH +L E +L+ + L+D GL + + + GYL+
Sbjct: 145 HIH--QHDIVHRDLKPENLLLASKCKGAAVKLADFGL-AIEVQGEQQAWFGFAGTPGYLS 201
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILSG 604
PE + + DI+A G+I++ +L G
Sbjct: 202 PEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 404 FSEANLLGKSSF----------SATYKG--ILRDGSVVAVKCIAKTSCKSDEGEFLKGLK 451
F LLGK +F + Y ILR ++A +A T +S +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES---------R 57
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVI 511
+L + +H L +L+ + R CF++ ++ G L HL E+V
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRL-CFVM-EYANGGELFFHL----SRERVFTEERARFYG 111
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
I + YLH + +V+ ++ E +++ + + ++D GL K D +M
Sbjct: 112 AEIVSALEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGT 168
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE 617
YLAPE + D + G+++++++ G+ PF Q E
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHE 211
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 404 FSEANLLGKSSF----------SATYKG--ILRDGSVVAVKCIAKTSCKSDEGEFLKGLK 451
F LLGK +F + Y ILR ++A +A T +S +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES---------R 57
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVI 511
+L + +H L +L+ + R CF++ ++ G L HL E+V
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRL-CFVM-EYANGGELFFHL----SRERVFTEERARFYG 111
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
I + YLH + +V+ ++ E +++ + + ++D GL K D +M
Sbjct: 112 AEIVSALEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGT 168
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE 617
YLAPE + D + G+++++++ G+ PF Q E
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHE 211
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 404 FSEANLLGKSSFSATYKGIL----RDGSVVAVKCIAK--TSCKSDEGEFLKGLKILTSLK 457
F LLGK +F K IL G A+K + K K + L ++L + +
Sbjct: 12 FEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 458 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKG 517
H L +L+ + R CF++ ++ G L HL E+V I
Sbjct: 69 HPFLTALKYSFQTHDRL-CFVM-EYANGGELFFHL----SRERVFSEDRARFYGAEIVSA 122
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 577
+ YLH ++ +V+ +L E +++ + + ++D GL K D +M YLAP
Sbjct: 123 LDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAP 180
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAES 618
E + D + G+++++++ G+ PF Q E
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHEK 218
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 404 FSEANLLGKSSF----------SATYKG--ILRDGSVVAVKCIAKTSCKSDEGEFLKGLK 451
F LLGK +F + Y ILR ++A +A T +S +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES---------R 57
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVI 511
+L + +H L +L+ + R CF++ ++ G L HL E+V
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRL-CFVM-EYANGGELFFHL----SRERVFTEERARFYG 111
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
I + YLH + +V+ ++ E +++ + + ++D GL K D +M
Sbjct: 112 AEIVSALEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGT 168
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE 617
YLAPE + D + G+++++++ G+ PF Q E
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHE 211
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 404 FSEANLLGKSSF----------SATYKG--ILRDGSVVAVKCIAKTSCKSDEGEFLKGLK 451
F LLGK +F + Y ILR ++A +A T +S +
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES---------R 60
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVI 511
+L + +H L +L+ + R CF++ ++ G L HL E+V
Sbjct: 61 VLQNTRHPFLTALKYAFQTHDRL-CFVM-EYANGGELFFHL----SRERVFTEERARFYG 114
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
I + YLH + +V+ ++ E +++ + + ++D GL K D +M
Sbjct: 115 AEIVSALEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGT 171
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE 617
YLAPE + D + G+++++++ G+ PF Q E
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHE 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 404 FSEANLLGKSSF----------SATYKG--ILRDGSVVAVKCIAKTSCKSDEGEFLKGLK 451
F LLGK +F + Y ILR ++A +A T +S +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES---------R 57
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVI 511
+L + +H L +L+ + R CF++ ++ G L HL E+V
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRL-CFVM-EYANGGELFFHL----SRERVFTEERARFYG 111
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA 571
I + YLH + +V+ ++ E +++ + + ++D GL K D +M
Sbjct: 112 AEIVSALEYLHSR--DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGT 168
Query: 572 MGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE 617
YLAPE + D + G+++++++ G+ PF Q E
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHE 211
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG 573
I G+ LH +R +V+ +L E +L+ + +SD GL + + ++ +G
Sbjct: 295 ICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--TIKGRVGTVG 350
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE 622
Y+APE R+T D +A G +++++++G+ +PF ++ + + E
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ---SPFQQRKKKIKREE 396
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 35 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 92
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 93 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 146
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 147 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 203
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 204 VITYILLSGASPFLGDTKQ 222
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKV 538
IY + GN+ L+ +K ++ R S K + + + +H + G+VH +L
Sbjct: 131 IYMVMECGNI--DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH--QHGIVHSDLKPANF 186
Query: 539 LIHRRYNPLLSDSGLHKLLADDIVFSMLKAS--AAMGYLAPEYTTTGRFTEKS------- 589
LI L+ D G+ + D S++K S A+ Y+ PE + ++
Sbjct: 187 LIVDGMLKLI-DFGIANQMQPDTT-SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 590 ----DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
D+++ G I++ + GK TPF + + SK+ IDPN E +F +L +
Sbjct: 245 SPKSDVWSLGCILYYMTYGK---TPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 301
Query: 646 LHCTHESPSHRPSIENVM 663
C P R SI ++
Sbjct: 302 KCCLKRDPKQRISIPELL 319
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 404 FSEANLLGKSSFSATYKGIL----RDGSVVAVKCIAK--TSCKSDEGEFLKGLKILTSLK 457
F LLGK +F K IL G A+K + K K + L ++L + +
Sbjct: 11 FEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 458 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKG 517
H L +L+ + R CF++ ++ G L HL E+V I
Sbjct: 68 HPFLTALKYSFQTHDRL-CFVM-EYANGGELFFHL----SRERVFSEDRARFYGAEIVSA 121
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 577
+ YLH ++ +V+ +L E +++ + + ++D GL K D +M YLAP
Sbjct: 122 LDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAP 179
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAES 618
E + D + G+++++++ G+ PF Q E
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHEK 217
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 102/237 (43%), Gaps = 16/237 (6%)
Query: 380 NGFSQEVLESFMFNLEEVERAT--QCFSEANLLGKSSFSATYKGILRDGSVVAVKCIAKT 437
+ F +++ + ++ EV++ + + LG +F ++ + + V V T
Sbjct: 27 DKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINT 86
Query: 438 SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAG 497
D+ + I+ L H L +L + + E LI +F+ G L + A
Sbjct: 87 PYPLDKYTVKNEISIMNQLHHPKLINLHD--AFEDKYEMVLILEFLSGGELFDRI---AA 141
Query: 498 SEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRY--NPLLSDSGLHK 555
+ + A I+ ++ +G+ ++H +VH ++ E ++ + + + D GL
Sbjct: 142 EDYKMSEAEVINYMRQACEGLKHMHEH--SIVHLDIKPENIMCETKKASSVKIIDFGLAT 199
Query: 556 LLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFT 612
L D + + A+A + APE +D++A G++ + +LSG ++PF
Sbjct: 200 KLNPDEIVKVTTATAE--FAAPEIVDREPVGFYTDMWAIGVLGYVLLSG---LSPFA 251
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 404 FSEANLLGKSSFSATYKGIL----RDGSVVAVKCIAK--TSCKSDEGEFLKGLKILTSLK 457
F LLGK +F K IL G A+K + K K + L ++L + +
Sbjct: 153 FEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 458 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKG 517
H L +L+ + R CF++ ++ G L HL E+V I
Sbjct: 210 HPFLTALKYSFQTHDRL-CFVM-EYANGGELFFHL----SRERVFSEDRARFYGAEIVSA 263
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 577
+ YLH ++ +V+ +L E +++ + + ++D GL K D +M YLAP
Sbjct: 264 LDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYLAP 321
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAES 618
E + D + G+++++++ G+ PF Q E
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHEK 359
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG 573
I G+ LH +R +V+ +L E +L+ + +SD GL + + ++ +G
Sbjct: 295 ICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--TIKGRVGTVG 350
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVE 622
Y+APE R+T D +A G +++++++G+ +PF ++ + + E
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ---SPFQQRKKKIKREE 396
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 24/203 (11%)
Query: 418 TYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKG----- 472
T K + R V +CI+K++ + +FLK + + E L + + +K
Sbjct: 33 TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 473 --------RGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGK 524
E LI ++ G + L L +E V E I +IK I +G+ YLH
Sbjct: 93 NLHEVYENTSEIILILEYAAGGEIFS-LCLPELAEMVSE-NDVIRLIKQILEGVYYLH-- 148
Query: 525 RPGLVHPNLSAEKVLIHRRYNPL----LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYT 580
+ +VH +L + +L+ Y PL + D G+ + + + + YLAPE
Sbjct: 149 QNNIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSRKIGHACELREIMGTPE--YLAPEIL 205
Query: 581 TTGRFTEKSDIYAFGMIVFQILS 603
T +D++ G+I + +L+
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLT 228
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 404 FSEANLLGKSSFSATYKGIL----RDGSVVAVKCIAK--TSCKSDEGEFLKGLKILTSLK 457
F LLGK +F K IL G A+K + K K + L ++L + +
Sbjct: 10 FEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 458 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKG 517
H L +L+ + R CF++ ++ G L HL E+V I
Sbjct: 67 HPFLTALKYSFQTHDRL-CFVM-EYANGGELFFHL----SRERVFSEDRARFYGAEIVSA 120
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 577
+ YLH ++ +V+ +L E +++ + + ++D GL K D +M YLAP
Sbjct: 121 LDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAP 178
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAES 618
E + D + G+++++++ G+ PF Q E
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHEK 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 94 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 205 VITYILLSGASPFLGDTKQ 223
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 22/228 (9%)
Query: 398 ERATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDE-----GEFLKGLK 451
E + LG F+ K + G A K I K KS + + +
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 452 ILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVI 511
IL ++H N+ +L + +K + LI + V G L D A E + E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKT--DVILILELVAGGELF---DFLAEKESLTE-EEATEFL 120
Query: 512 KGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPL----LSDSGL-HKLLADDIVFSML 566
K I G+ YLH + + H +L E +++ R P + D GL HK+ D
Sbjct: 121 KQILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI---DFGNEFK 175
Query: 567 KASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQ 614
++APE ++D+++ G+I + +LSG T+Q
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ 223
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 404 FSEANLLGKSSFSATYKGIL----RDGSVVAVKCIAK--TSCKSDEGEFLKGLKILTSLK 457
F LLGK +F K IL G A+K + K K + L ++L + +
Sbjct: 150 FEYLKLLGKGTFG---KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 458 HENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKG 517
H L +L+ + R CF++ ++ G L HL E+V I
Sbjct: 207 HPFLTALKYSFQTHDRL-CFVM-EYANGGELFFHL----SRERVFSEDRARFYGAEIVSA 260
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAP 577
+ YLH ++ +V+ +L E +++ + + ++D GL K D +M YLAP
Sbjct: 261 LDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYLAP 318
Query: 578 EYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAES 618
E + D + G+++++++ G+ PF Q E
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRL---PFYNQDHEK 356
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDEG-----EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 94 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIG 204
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 205 VITYILLSGASPFLGDTKQ 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 35 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 92
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 93 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 146
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 147 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 203
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 204 VITYILLSGASPFLGDTKQ 222
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 102/212 (48%), Gaps = 21/212 (9%)
Query: 404 FSEANLLGKSSF---SATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN 460
+++ +G+ ++ S+ Y + + + VA+K I+ ++ L+ ++IL +HEN
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRK--TRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 461 LASLRGICCS---KGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKG 517
+ +R I + + + +++ D + +L + L + S + + + I +G
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQQLSNDHICY-----FLYQILRG 156
Query: 518 ISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLAD---DIVFSMLKASAAMGY 574
+ Y+H ++H +L +LI+ + + D GL + +AD D + + A Y
Sbjct: 157 LKYIHSA--NVLHRDLKPSNLLINTTCDLKICDFGLAR-IADPEHDHTGFLTEXVATRWY 213
Query: 575 LAPEYTTTGR-FTEKSDIYAFGMIVFQILSGK 605
APE + +T+ DI++ G I+ ++LS +
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 482 FVPNGNL---LQHLDLEAGS-EKVLEWATRI------SVIKGIAKGISYLHGKRPGLVHP 531
F +G + ++H+D GS ++VL+ A RI V + KG++YL K ++H
Sbjct: 92 FYSDGEISICMEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHR 148
Query: 532 NLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDI 591
++ +L++ R L D G+ L D + S + + Y++PE ++ +SDI
Sbjct: 149 DVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS---YMSPERLQGTHYSVQSDI 205
Query: 592 YAFGMIVFQILSGKCSI 608
++ G+ + ++ G+ I
Sbjct: 206 WSMGLSLVEMAVGRYPI 222
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 94 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 205 VITYILLSGASPFLGDTKQ 223
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEK---VLEWATRISVIKGIAKGISYLHGKR 525
C + + + ++V G+L+ H+ + G K + +A IS+ G+ +LH +
Sbjct: 88 CFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPQAVFYAAEISI------GLFFLHKR- 139
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
G+++ +L + V++ + ++D G+ K D V + + Y+APE +
Sbjct: 140 -GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-TTREFCGTPDYIAPEIIAYQPY 197
Query: 586 TEKSDIYAFGMIVFQILSGK 605
+ D +A+G++++++L+G+
Sbjct: 198 GKSVDWWAYGVLLYEMLAGQ 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 24/214 (11%)
Query: 404 FSEANLLGKSSF----SATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHE 459
F +LLG+ ++ SAT+K G +VA+K I L+ +KIL KHE
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPT---GEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 460 NLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLE-AGSEKVLEWATRISVIKGIAKGI 518
N+ ++ I R + F ++ V L DL S ++L I + +
Sbjct: 70 NIITIFNI----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 519 SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFS---------MLKAS 569
LHG ++H +L +LI+ + + D GL +++ + + M++
Sbjct: 126 KVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 570 AAMGYLAPEYT-TTGRFTEKSDIYAFGMIVFQIL 602
A Y APE T+ +++ D+++ G I+ ++
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 94 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 205 VITYILLSGASPFLGDTKQ 223
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 408 NLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLK----ILTSLKHENLA 462
++GK FS + I R+ G AVK + S G + LK I LKH ++
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH 522
L S G +++++F+ +L + A + V A ++ I + + Y H
Sbjct: 92 ELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 523 GKRPGLVHPNLSAEKVLIHRRYN--PL-LSDSGLHKLLADDIVFSMLKASAAMG---YLA 576
++H ++ VL+ + N P+ L G+ L + S L A +G ++A
Sbjct: 150 DN--NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE----SGLVAGGRVGTPHFMA 203
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILSG 604
PE + + D++ G+I+F +LSG
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 408 NLLGKSSFSATYKGILRD-GSVVAVKCIAKTSCKSDEGEFLKGLK----ILTSLKHENLA 462
++GK FS + I R+ G AVK + S G + LK I LKH ++
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 463 SLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLH 522
L S G +++++F+ +L + A + V A ++ I + + Y H
Sbjct: 90 ELLETYSSDGM--LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 523 GKRPGLVHPNLSAEKVLIHRRYN--PL-LSDSGLHKLLADDIVFSMLKASAAMG---YLA 576
++H ++ VL+ + N P+ L G+ L + S L A +G ++A
Sbjct: 148 DN--NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE----SGLVAGGRVGTPHFMA 201
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILSG 604
PE + + D++ G+I+F +LSG
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 94 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 205 VITYILLSGASPFLGDTKQ 223
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 94 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 205 VITYILLSGASPFLGDTKQ 223
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 94 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 205 VITYILLSGASPFLGDTKQ 223
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 23/232 (9%)
Query: 410 LGKSSFSATYKGILRDGSV-VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGIC 468
+G S+S + I + ++ AVK I K+ K D E ++ L L +H N+ +L+ +
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKS--KRDPTEEIEIL--LRYGQHPNIITLKDVY 85
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGL 528
G+ +++ + + G LL + +K +V+ I K + YLH + G+
Sbjct: 86 -DDGK-YVYVVTELMKGGELLDKI----LRQKFFSEREASAVLFTITKTVEYLHAQ--GV 137
Query: 529 VHPNLSAEKVL-IHRRYNP---LLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGR 584
VH +L +L + NP + D G K L + M A ++APE
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTA-NFVAPEVLERQG 196
Query: 585 FTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVS 636
+ DI++ G++++ +L+G TPF ++ E+ + GKFS+S
Sbjct: 197 YDAACDIWSLGVLLYTMLTG---YTPFANGPDDTP--EEILARIGSGKFSLS 243
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 404 FSEANLLGKSSF----SATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHE 459
F +LLG+ ++ SAT+K G +VA+K I L+ +KIL KHE
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPT---GEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 460 NLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLE-AGSEKVLEWATRISVIKGIAKGI 518
N+ ++ I R + F ++ V L DL S ++L I + +
Sbjct: 70 NIITIFNI----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 519 SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFS---------MLKAS 569
LHG ++H +L +LI+ + + D GL +++ + + M +
Sbjct: 126 KVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 570 AAMGYLAPEYT-TTGRFTEKSDIYAFGMIVFQIL 602
A Y APE T+ +++ D+++ G I+ ++
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKV 538
IY + GN+ L+ +K ++ R S K + + + +H + G+VH +L
Sbjct: 87 IYMVMECGNI--DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH--QHGIVHSDLKPANF 142
Query: 539 LIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA--MGYLAPEYTTTGRFTEKS------- 589
LI L+ D G+ + D S++K S + Y+ PE + ++
Sbjct: 143 LIVDGMLKLI-DFGIANQMQPDTT-SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 200
Query: 590 ----DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
D+++ G I++ + GK TPF + + SK+ IDPN E +F +L +
Sbjct: 201 SPKSDVWSLGCILYYMTYGK---TPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 257
Query: 646 LHCTHESPSHRPSIENVM 663
C P R SI ++
Sbjct: 258 KCCLKRDPKQRISIPELL 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 94 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 205 VITYILLSGASPFLGDTKQ 223
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLK 567
I VI + +++ H G++H ++ ++I + D G+ + +AD S+ +
Sbjct: 119 IEVIADACQALNFSHQN--GIIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQ 175
Query: 568 ASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFT 612
+A +G YL+PE +SD+Y+ G +++++L+G+ PFT
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE---PPFT 220
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLK 567
I VI + +++ H G++H ++ ++I + D G+ + +AD S+ +
Sbjct: 119 IEVIADACQALNFSHQN--GIIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQ 175
Query: 568 ASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFT 612
+A +G YL+PE +SD+Y+ G +++++L+G+ PFT
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE---PPFT 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDEG-----EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 94 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 205 VITYILLSGASPFLGDTKQ 223
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKV 538
IY + GN+ L+ +K ++ R S K + + + +H + G+VH +L
Sbjct: 83 IYMVMECGNI--DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH--QHGIVHSDLKPANF 138
Query: 539 LIHRRYNPLLSDSGLHKLLADDIVFSMLKASAA--MGYLAPEYTTTGRFTEKS------- 589
LI L+ D G+ + D S++K S + Y+ PE + ++
Sbjct: 139 LIVDGMLKLI-DFGIANQMQPDTT-SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 196
Query: 590 ----DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
D+++ G I++ + GK TPF + + SK+ IDPN E +F +L +
Sbjct: 197 SPKSDVWSLGCILYYMTYGK---TPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 253
Query: 646 LHCTHESPSHRPSIENVM 663
C P R SI ++
Sbjct: 254 KCCLKRDPKQRISIPELL 271
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIL 93
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 94 ELVAGGELF---DFLAEKESLTEEEA-TEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 205 VITYILLSGASPFLGDTKQ 223
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 36/80 (45%)
Query: 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124
G + ++ L G +S A GL SL L LH N + V P L L LYL NN
Sbjct: 153 GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212
Query: 125 LSGKIPSQIGNMTNLQVLQL 144
LS + + LQ L+L
Sbjct: 213 LSALPTEALAPLRALQYLRL 232
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Query: 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124
GR+ + L GL P GL +L LYL NAL + L L+ L+L+ N
Sbjct: 105 GRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR 164
Query: 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIP 178
+S + +L L L N++ P L +L L L N L+ A+P
Sbjct: 165 ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALP 217
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 70 ISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKI 129
+ LQ L L +LT L+LH N ++ V + L L L L+ N ++
Sbjct: 134 LYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVH 193
Query: 130 PSQIGNMTNLQVLQLCYNKLTGNIPTQ-LGSLRKLSVLALQYN 171
P ++ L L L N L+ +PT+ L LR L L L N
Sbjct: 194 PHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRALQYLRLNDN 235
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 50/140 (35%)
Query: 82 PAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQV 141
PA GL L L+L L + P L+ L LYL N L ++ NL
Sbjct: 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 157
Query: 142 LQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPV 201
L L N+++ L L L L N++ P NNL
Sbjct: 158 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 217
Query: 202 PVKLANVPKLEVLDIRNNSF 221
LA + L+ L + +N +
Sbjct: 218 TEALAPLRALQYLRLNDNPW 237
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 36/80 (45%)
Query: 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124
G + ++ L G +S A GL SL L LH N + V P L L LYL NN
Sbjct: 152 GNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 211
Query: 125 LSGKIPSQIGNMTNLQVLQL 144
LS + + LQ L+L
Sbjct: 212 LSALPTEALAPLRALQYLRL 231
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Query: 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124
GR+ + L GL P GL +L LYL NAL + L L+ L+L+ N
Sbjct: 104 GRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR 163
Query: 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIP 178
+S + +L L L N++ P L +L L L N L+ A+P
Sbjct: 164 ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS-ALP 216
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 70 ISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKI 129
+ LQ L L +LT L+LH N ++ V + L L L L+ N ++
Sbjct: 133 LYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVH 192
Query: 130 PSQIGNMTNLQVLQLCYNKLTGNIPTQ-LGSLRKLSVLALQYN 171
P ++ L L L N L+ +PT+ L LR L L L N
Sbjct: 193 PHAFRDLGRLMTLYLFANNLSA-LPTEALAPLRALQYLRLNDN 234
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 50/140 (35%)
Query: 82 PAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQV 141
PA GL L L+L L + P L+ L LYL N L ++ NL
Sbjct: 97 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 156
Query: 142 LQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPV 201
L L N+++ L L L L N++ P NNL
Sbjct: 157 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 216
Query: 202 PVKLANVPKLEVLDIRNNSF 221
LA + L+ L + +N +
Sbjct: 217 TEALAPLRALQYLRLNDNPW 236
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 404 FSEANLLGKSSF----SATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHE 459
F +LLG+ ++ SAT+K G +VA+K I L+ +KIL KHE
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPT---GEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 460 NLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLE-AGSEKVLEWATRISVIKGIAKGI 518
N+ ++ I R + F ++ V L DL S ++L I + +
Sbjct: 70 NIITIFNI----QRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 519 SYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFS---------MLKAS 569
LHG ++H +L +LI+ + + D GL +++ + + M +
Sbjct: 126 KVLHGS--NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 570 AAMGYLAPEYT-TTGRFTEKSDIYAFGMIVFQIL 602
A Y APE T+ +++ D+++ G I+ ++
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 489 LQHLDLEAGS-EKVLEWATRI------SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
++H+D GS ++VL+ A RI V + KG++YL K ++H ++ +L++
Sbjct: 86 MEHMD--GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK-IMHRDVKPSNILVN 142
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
R L D G+ L D++ + + Y++PE ++ +SDI++ G+ + ++
Sbjct: 143 SRGEIKLCDFGVSGQLIDEMANEFVGTRS---YMSPERLQGTHYSVQSDIWSMGLSLVEM 199
Query: 602 LSGKCSITPFT 612
G+ P
Sbjct: 200 AVGRYPRPPMA 210
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 21/199 (10%)
Query: 426 GSVVAVKCIAKTSCKSDE-----GEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIY 480
G A K I K KS + + + IL ++H N+ +L + +K + LI
Sbjct: 36 GLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--DVILIG 93
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+ V G L D A E + E +K I G+ YLH + + H +L E +++
Sbjct: 94 ELVAGGELF---DFLAEKESLTE-EEATEFLKQILNGVYYLHSLQ--IAHFDLKPENIML 147
Query: 541 HRRYNPL----LSDSGL-HKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFG 595
R P + D GL HK+ D ++APE ++D+++ G
Sbjct: 148 LDRNVPKPRIKIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204
Query: 596 MIVFQILSGKCSITPFTRQ 614
+I + +LSG T+Q
Sbjct: 205 VITYILLSGASPFLGDTKQ 223
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 399 RATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC-KSDEGEFLKG-LKILTS 455
R + + LGK F+ Y+ D V A K + K+ K + E + + I S
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQ-HLDLEAGSEKVLEWATRISVIKGI 514
L + ++ G + +++ + +LL+ H +A +E + R ++
Sbjct: 83 LDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---- 136
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG- 573
+G+ YLH R ++H +L + ++ + + D GL A I F + G
Sbjct: 137 -QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGL----ATKIEFDGERKKDLCGT 189
Query: 574 --YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEG 631
Y+APE + + DI++ G I++ +L GK PF + + + I N
Sbjct: 190 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFETSCLKETYIR--IKKN--- 241
Query: 632 KFSVSEASNLGQIAL--HCTHESPSHRPSIENVMQE 665
++SV N AL H P+ RPS+ ++ +
Sbjct: 242 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 277
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKV 538
IY + GN+ L+ +K ++ R S K + + + +H + G+VH +L
Sbjct: 131 IYMVMECGNI--DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH--QHGIVHSDLKPANF 186
Query: 539 LIHRRYNPLLSDSGLHKLLADDIVFSMLKAS--AAMGYLAPEYTTTGRFTEKS------- 589
LI L+ D G+ + D S++K S + Y+ PE + ++
Sbjct: 187 LIVDGMLKLI-DFGIANQMQPDTT-SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 590 ----DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
D+++ G I++ + GK TPF + + SK+ IDPN E +F +L +
Sbjct: 245 SPKSDVWSLGCILYYMTYGK---TPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 301
Query: 646 LHCTHESPSHRPSIENVM 663
C P R SI ++
Sbjct: 302 KCCLKRDPKQRISIPELL 319
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 399 RATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC-KSDEGEFLKG-LKILTS 455
R + + LGK F+ Y+ D V A K + K+ K + E + + I S
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQ-HLDLEAGSEKVLEWATRISVIKGI 514
L + ++ G + +++ + +LL+ H +A +E + R ++
Sbjct: 99 LDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---- 152
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG- 573
+G+ YLH R ++H +L + ++ + + D GL A I F + G
Sbjct: 153 -QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGL----ATKIEFDGERKKTLCGT 205
Query: 574 --YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEG 631
Y+APE + + DI++ G I++ +L GK PF + + + I N
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFETSCLKETYIR--IKKN--- 257
Query: 632 KFSVSEASNLGQIAL--HCTHESPSHRPSIENVMQE 665
++SV N AL H P+ RPS+ ++ +
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 448 KGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNG--NLLQHLDLEAGSEKVLEWA 505
+ + +L LKH N+ SL+ + S + +L++D+ + ++++ ++K ++
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLP 126
Query: 506 TRI--SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH----RRYNPLLSDSGLHKLLAD 559
+ S++ I GI YLH ++H +L +L+ R ++D G +L
Sbjct: 127 RGMVKSLLYQILDGIHYLHAN--WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 560 DI--VFSMLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQILSGK 605
+ + + Y APE R +T+ DI+A G I ++L+ +
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKV 538
IY + GN+ L+ +K ++ R S K + + + +H + G+VH +L
Sbjct: 84 IYMVMECGNI--DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH--QHGIVHSDLKPANF 139
Query: 539 LIHRRYNPLLSDSGLHKLLADDIVFSMLKAS--AAMGYLAPEYTTTGRFTEKS------- 589
LI L+ D G+ + D S++K S + Y+ PE + ++
Sbjct: 140 LIVDGMLKLI-DFGIANQMQPDTT-SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 197
Query: 590 ----DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
D+++ G I++ + GK TPF + + SK+ IDPN E +F +L +
Sbjct: 198 SPKSDVWSLGCILYYMTYGK---TPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 254
Query: 646 LHCTHESPSHRPSIENVM 663
C P R SI ++
Sbjct: 255 KCCLKRDPKQRISIPELL 272
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLK 567
I VI + +++ H G++H ++ ++I + D G+ + +AD S+ +
Sbjct: 136 IEVIADACQALNFSHQN--GIIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQ 192
Query: 568 ASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFT 612
+A +G YL+PE +SD+Y+ G +++++L+G+ PFT
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE---PPFT 237
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 399 RATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC-KSDEGEFLKG-LKILTS 455
R + + LGK F+ Y+ D V A K + K+ K + E + + I S
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQ-HLDLEAGSEKVLEWATRISVIKGI 514
L + ++ G + +++ + +LL+ H +A +E + R ++
Sbjct: 99 LDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---- 152
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG- 573
+G+ YLH R ++H +L + ++ + + D GL A I F + G
Sbjct: 153 -QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGL----ATKIEFDGERKKXLCGT 205
Query: 574 --YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEG 631
Y+APE + + DI++ G I++ +L GK PF + + + I N
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFETSCLKETYIR--IKKN--- 257
Query: 632 KFSVSEASNLGQIAL--HCTHESPSHRPSIENVMQE 665
++SV N AL H P+ RPS+ ++ +
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
R S K + + + +H + G+VH +L LI L+ D G+ + D S++
Sbjct: 129 RKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTT-SVV 184
Query: 567 KASAA--MGYLAPEYTTTGRFTEKS-----------DIYAFGMIVFQILSGKCSITPFTR 613
K S + Y+ PE + ++ D+++ G I++ + GK TPF +
Sbjct: 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---TPFQQ 241
Query: 614 QAAESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 663
+ SK+ IDPN E +F +L + C P R SI ++
Sbjct: 242 IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 479 IYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKV 538
IY + GN+ L+ +K ++ R S K + + + +H + G+VH +L
Sbjct: 131 IYMVMECGNI--DLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH--QHGIVHSDLKPANF 186
Query: 539 LIHRRYNPLLSDSGLHKLLADDIVFSMLKAS--AAMGYLAPEYTTTGRFTEKS------- 589
LI L+ D G+ + D S++K S + Y+ PE + ++
Sbjct: 187 LIVDGMLKLI-DFGIANQMQPDTT-SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 590 ----DIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIA 645
D+++ G I++ + GK TPF + + SK+ IDPN E +F +L +
Sbjct: 245 SPKSDVWSLGCILYYMTYGK---TPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVL 301
Query: 646 LHCTHESPSHRPSIENVM 663
C P R SI ++
Sbjct: 302 KCCLKRDPKQRISIPELL 319
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKA 568
+V + + + ++YLH + G++H ++ ++ +L+ LSD G ++ D+ K
Sbjct: 145 TVCEAVLQALAYLHAQ--GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP----KR 198
Query: 569 SAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK 605
+G ++APE + + + DI++ G++V +++ G+
Sbjct: 199 KXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 30/276 (10%)
Query: 399 RATQCFSEANLLGKSSFSATYKGILRD-GSVVAVKCIAKTSC-KSDEGEFLKG-LKILTS 455
R + + LGK F+ Y+ D V A K + K+ K + E + + I S
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 456 LKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQ-HLDLEAGSEKVLEWATRISVIKGI 514
L + ++ G + +++ + +LL+ H +A +E + R ++
Sbjct: 99 LDNPHVVGFHGFF--EDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI---- 152
Query: 515 AKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG- 573
+G+ YLH R ++H +L + ++ + + D GL A I F + G
Sbjct: 153 -QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGL----ATKIEFDGERKKDLCGT 205
Query: 574 --YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEG 631
Y+APE + + DI++ G I++ +L GK PF + + + I N
Sbjct: 206 PNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK---PPFETSCLKETYIR--IKKN--- 257
Query: 632 KFSVSEASNLGQIAL--HCTHESPSHRPSIENVMQE 665
++SV N AL H P+ RPS+ ++ +
Sbjct: 258 EYSVPRHINPVASALIRRMLHADPTLRPSVAELLTD 293
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 55 VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 113
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 114 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXD 166
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 603 SGK 605
S +
Sbjct: 227 SNR 229
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 41/186 (22%)
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH--RRYNP-----------LLSDSGL- 553
IS+++ IA G+++LH + ++H +L + +L+ R+ L+SD GL
Sbjct: 136 ISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 554 HKLLADDIVF--SMLKASAAMGYLAPEY---TTTGRFTEKSDIYAFGMIVFQILS-GKCS 607
KL + F ++ S G+ APE +T R T DI++ G + + ILS GK
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK-- 251
Query: 608 ITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIAL---------HCTHESPSHRPS 658
PF + + S + + G FS+ E L +L P RP+
Sbjct: 252 -HPFGDKYSRESNI-------IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPT 303
Query: 659 IENVMQ 664
V++
Sbjct: 304 AMKVLR 309
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 89 KSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNK 148
+ +T LYL N ++PKE+++ L+ + L+ N +S NMT L L L YN+
Sbjct: 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89
Query: 149 LTGNIPTQLGSLRKLSVLALQYNQLT 174
L P L+ L +L+L N ++
Sbjct: 90 LRCIPPRTFDGLKSLRLLSLHGNDIS 115
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 41/186 (22%)
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH--RRYNP-----------LLSDSGL- 553
IS+++ IA G+++LH + ++H +L + +L+ R+ L+SD GL
Sbjct: 136 ISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 554 HKLLADDIVF--SMLKASAAMGYLAPEY---TTTGRFTEKSDIYAFGMIVFQILS-GKCS 607
KL + F ++ S G+ APE +T R T DI++ G + + ILS GK
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK-- 251
Query: 608 ITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIAL---------HCTHESPSHRPS 658
PF + + S + + G FS+ E L +L P RP+
Sbjct: 252 -HPFGDKYSRESNI-------IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPT 303
Query: 659 IENVMQ 664
V++
Sbjct: 304 AMKVLR 309
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 86/191 (45%), Gaps = 22/191 (11%)
Query: 424 RDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGR----GECFL 478
R G+ VA+K + + + + L++L ++HEN+ L + + +L
Sbjct: 48 RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYL 107
Query: 479 IYDFVPN--GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAE 536
+ F+ G L++H L G +++ ++ + KG+ Y+H G++H +L
Sbjct: 108 VMPFMGTDLGKLMKHEKL--GEDRIQ------FLVYQMLKGLRYIHA--AGIIHRDLKPG 157
Query: 537 KVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFG 595
+ ++ + D GL + AD M Y APE R+T+ DI++ G
Sbjct: 158 NLAVNEDCELKILDFGLARQ-ADS---EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVG 213
Query: 596 MIVFQILSGKC 606
I+ ++++GK
Sbjct: 214 CIMAEMITGKT 224
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 106/270 (39%), Gaps = 38/270 (14%)
Query: 410 LGKSSFSATYKG-ILRDGSVVAVKCI---------AKTSCKSDEGEFLKGLKILTSLKHE 459
+G+ FS Y+ L DG VA+K + A+ C +K + +L L H
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADC-------IKEIDLLKQLNHP 92
Query: 460 NLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGIS 519
N+ ++ E ++ + G+L + + ++++ T + +
Sbjct: 93 NV--IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 520 YLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLA 576
++H +R ++H ++ V I L D GL + + A + +G Y++
Sbjct: 151 HMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT----AAHSLVGTPYYMS 204
Query: 577 PEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAE----SSKVEDFIDPNLEGK 632
PE + KSDI++ G +++++ + + +PF K+E P L
Sbjct: 205 PERIHENGYNFKSDIWSLGCLLYEMAALQ---SPFYGDKMNLYSLCKKIEQCDYPPLPSD 261
Query: 633 FSVSEASNLGQIALHCTHESPSHRPSIENV 662
E L Q+ C + P RP + V
Sbjct: 262 HYSEE---LRQLVNMCINPDPEKRPDVTYV 288
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKG--IAKGISYLHGKRP 526
C + + + ++V G+L+ H+ ++V + +V IA G+ +L K
Sbjct: 410 CFQTMDRLYFVMEYVNGGDLMYHI------QQVGRFKEPHAVFYAAEIAIGLFFLQSK-- 461
Query: 527 GLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFT 586
G+++ +L + V++ + ++D G+ K D V + Y+APE +
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAPEIIAYQPYG 520
Query: 587 EKSDIYAFGMIVFQILSGK 605
+ D +AFG++++++L+G+
Sbjct: 521 KSVDWWAFGVLLYEMLAGQ 539
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 62/172 (36%), Gaps = 2/172 (1%)
Query: 51 CSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA 110
C S D V + LQ GL+ A GL LT L L +N L +
Sbjct: 21 CQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFD 80
Query: 111 SLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQY 170
L+EL L L N L+ ++T L L L N+L L KL L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140
Query: 171 NQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPV-KLANVPKLEVLDIRNNSF 221
NQL +IPA N VP + KL+ + + N F
Sbjct: 141 NQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 62/172 (36%), Gaps = 2/172 (1%)
Query: 51 CSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA 110
C S D V + LQ GL+ A GL LT L L +N L +
Sbjct: 21 CQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFD 80
Query: 111 SLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQY 170
L+EL L L N L+ ++T L L L N+L L KL L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140
Query: 171 NQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPV-KLANVPKLEVLDIRNNSF 221
NQL +IPA N VP + KL+ + + N F
Sbjct: 141 NQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 82 PAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQV 141
P L +L LYL N L + SL++L+ L L N L+ + + +L+
Sbjct: 57 PGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKE 116
Query: 142 LQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L +C NKLT +P + L L+ LAL NQL
Sbjct: 117 LFMCCNKLT-ELPRGIERLTHLTHLALDQNQL 147
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 105 IPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQL-GSLRKL 163
+P I + +++ LYL+ N ++ P ++ NL+ L L N+L G +P + SL +L
Sbjct: 34 VPAGIPTNAQI--LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQL 90
Query: 164 SVLALQYNQLT 174
+VL L NQLT
Sbjct: 91 TVLDLGTNQLT 101
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 69/140 (49%), Gaps = 13/140 (9%)
Query: 469 CSKGRGECFLIYDFVPNGNLLQHLDLEAGSEK---VLEWATRISVIKGIAKGISYLHGKR 525
C + + + ++V G+L+ H+ + G K + +A I++ G+ +L K
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAI------GLFFLQSK- 140
Query: 526 PGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRF 585
G+++ +L + V++ + ++D G+ K D V + Y+APE +
Sbjct: 141 -GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAPEIIAYQPY 198
Query: 586 TEKSDIYAFGMIVFQILSGK 605
+ D +AFG++++++L+G+
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQ 218
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 104/270 (38%), Gaps = 26/270 (9%)
Query: 404 FSEANLLGKSSFSAT---YKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHEN 460
F + N L K + + + +KG + +V + +F + L H N
Sbjct: 9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68
Query: 461 LASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISY 520
+ + G C S LI + P G+L L G+ V++ + + A+G ++
Sbjct: 69 VLPVLGACQSPPAPHPTLITHWXPYGSLYN--VLHEGTNFVVDQSQAVKFALDXARGXAF 126
Query: 521 LHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASA--AMGYLAPE 578
LH P + L++ V I +S + D+ FS A ++APE
Sbjct: 127 LHTLEPLIPRHALNSRSVXIDEDXTARISXA--------DVKFSFQSPGRXYAPAWVAPE 178
Query: 579 Y-----TTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEGKF 633
T R +D ++F ++++++++ + + + + P +
Sbjct: 179 ALQKKPEDTNR--RSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGI 236
Query: 634 SVSEASNLGQIALHCTHESPSHRPSIENVM 663
S S L +I C +E P+ RP + ++
Sbjct: 237 S-PHVSKLXKI---CXNEDPAKRPKFDXIV 262
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 109
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 110 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXD 162
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 163 LKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 603 SGK 605
S +
Sbjct: 223 SNR 225
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 16/168 (9%)
Query: 507 RISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSML 566
R S K + + + +H + G+VH +L LI L+ +++ D
Sbjct: 129 RKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKD 186
Query: 567 KASAAMGYLAPEYTTTGRFTEKS-----------DIYAFGMIVFQILSGKCSITPFTRQA 615
+ Y+ PE + ++ D+++ G I++ + GK TPF +
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---TPFQQII 243
Query: 616 AESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVM 663
+ SK+ IDPN E +F +L + C P R SI ++
Sbjct: 244 NQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL + +HEN+ + I + + + +++ D +
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 111
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 112 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTSD 164
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 603 SGK 605
S +
Sbjct: 225 SNR 227
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 38 NRLLTSWAPNADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYL 96
N+ L W A P GV+ + NGRV +SL+G G SG +P A+G L L L L
Sbjct: 63 NKELDXWG--AQP-------GVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLAL 112
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 118 LYLNVNNL-SGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGA 176
+Y+ NNL + + + + L L+ YN+L G +P GS KL+ L L YNQ+T
Sbjct: 310 IYIGYNNLKTFPVETSLQKXKKLGXLECLYNQLEGKLPA-FGSEIKLASLNLAYNQIT-E 367
Query: 177 IPA 179
IPA
Sbjct: 368 IPA 370
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 139 LQVLQLCYNKL-TGNIPTQLGSLRKLSVLALQYNQLTGAIPA 179
+Q++ + YN L T + T L +KL L YNQL G +PA
Sbjct: 307 IQIIYIGYNNLKTFPVETSLQKXKKLGXLECLYNQLEGKLPA 348
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 109
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 110 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXD 162
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 603 SGK 605
S +
Sbjct: 223 SNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 113
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 114 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXD 166
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 603 SGK 605
S +
Sbjct: 227 SNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL + +HEN+ + I + + + +++ D +
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 111
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 112 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 164
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 603 SGK 605
S +
Sbjct: 225 SNR 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 109
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 110 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTXD 162
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 603 SGK 605
S +
Sbjct: 223 SNR 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 113
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 114 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 166
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 167 LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 603 SGK 605
S +
Sbjct: 227 SNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 114
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 115 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 167
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 168 LKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 603 SGK 605
S +
Sbjct: 228 SNR 230
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 16/194 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 42 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEE 100
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 101 FQDVYLVMELM-DANLXQVIQMELDHERM------SYLLYQMLXGIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSGKC 606
+ G I+ +++ K
Sbjct: 210 SVGCIMGEMVRHKI 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 111
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 112 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 164
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 165 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 224
Query: 603 SGK 605
S +
Sbjct: 225 SNR 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 114
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 115 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 167
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 168 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 227
Query: 603 SGK 605
S +
Sbjct: 228 SNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 57 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 115
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 116 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 168
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 169 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 228
Query: 603 SGK 605
S +
Sbjct: 229 SNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 48 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 106
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 107 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 159
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 160 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 219
Query: 603 SGK 605
S +
Sbjct: 220 SNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 113
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 114 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 166
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 603 SGK 605
S +
Sbjct: 227 SNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 59 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 117
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 118 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 170
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 171 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 230
Query: 603 SGK 605
S +
Sbjct: 231 SNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 109
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 110 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 162
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 603 SGK 605
S +
Sbjct: 223 SNR 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 109
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 110 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 162
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 163 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 222
Query: 603 SGK 605
S +
Sbjct: 223 SNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 107
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 108 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 160
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 603 SGK 605
S +
Sbjct: 221 SNR 223
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGICCSKGRGECFLIYDFVP 484
G V V+ I +C ++ FL+G L + H N+ R + E +++ F+
Sbjct: 36 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWVVTSFMA 93
Query: 485 NG---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
G +L+ ++ +E + + +++G+ K + Y+H G VH ++ A +LI
Sbjct: 94 YGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHHM--GYVHRSVKASHILIS 146
Query: 542 RRYNPLLSDSGLHKLLA-------DDIVFSMLKASA-AMGYLAPEYTTTGR--FTEKSDI 591
LS GL L+ +V K S + +L+PE + KSDI
Sbjct: 147 VDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 204
Query: 592 YAFGMIVFQILSGKCSITPFTRQAAESSKVE 622
Y+ G+ ++ +G PF A +E
Sbjct: 205 YSVGITACELANGH---VPFKDMPATQMLLE 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 107
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 108 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 160
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 161 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 220
Query: 603 SGK 605
S +
Sbjct: 221 SNR 223
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 113
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 114 TDLYKLLKCQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 166
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 603 SGK 605
S +
Sbjct: 227 SNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA+K I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 129
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 130 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 182
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 183 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 242
Query: 603 SGK 605
S +
Sbjct: 243 SNR 245
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 448 KGLKILTSLKHENLASLRGI----CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLE 503
+ L++L LKHEN+ L + + E +L+ + +L + +A S++ ++
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQ 134
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ ++ + +G+ Y+H G++H +L V ++ + D GL + AD+
Sbjct: 135 F-----LVYQLLRGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLAR-QADE--- 183
Query: 564 SMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKC 606
M A Y APE + + DI++ G I+ ++L GK
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 16/194 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 35 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 93
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 94 FQDVYLVMELM-DANLXQVIQMELDHERM------SYLLYQMLXGIKHLHSA--GIIHRD 144
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 145 LKPSNIVVKSDXTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 202
Query: 593 AFGMIVFQILSGKC 606
+ G I+ +++ K
Sbjct: 203 SVGCIMGEMVRHKI 216
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 45/191 (23%)
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH--RRYNP-----------LLSDSGL- 553
IS+++ IA G+++LH + ++H +L + +L+ R+ L+SD GL
Sbjct: 118 ISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 554 HKLLADDIVF--SMLKASAAMGYLAPEY-------TTTGRFTEKSDIYAFGMIVFQILS- 603
KL + F ++ S G+ APE T R T DI++ G + + ILS
Sbjct: 176 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 604 GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIAL---------HCTHESPS 654
GK PF + + S + + G FS+ E L +L P
Sbjct: 236 GK---HPFGDKYSRESNI-------IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPL 285
Query: 655 HRPSIENVMQE 665
RP+ V++
Sbjct: 286 KRPTAMKVLRH 296
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 16/194 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 42 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 100
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 101 FQDVYLVMELM-DANLXQVIQMELDHERM------SYLLYQMLXGIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSGKC 606
+ G I+ +++ K
Sbjct: 210 SVGCIMGEMVRHKI 223
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 448 KGLKILTSLKHENLASLRGICCS----KGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLE 503
+ L++L LKHEN+ L + + E +L+ + +L + +A S++ ++
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHVQ 126
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ ++ + +G+ Y+H G++H +L V ++ + D GL + AD+
Sbjct: 127 F-----LVYQLLRGLKYIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLAR-QADE--- 175
Query: 564 SMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKC 606
M A Y APE + + DI++ G I+ ++L GK
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKG-LKILTSLKHENLASLRGICCSKGRGECFLIYDFVP 484
G V V+ I +C ++ FL+G L + H N+ R + E +++ F+
Sbjct: 52 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--ELWVVTSFMA 109
Query: 485 NG---NLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
G +L+ ++ +E + + +++G+ K + Y+H G VH ++ A +LI
Sbjct: 110 YGSAKDLICTHFMDGMNELAIAY-----ILQGVLKALDYIHHM--GYVHRSVKASHILIS 162
Query: 542 RRYNPLLSDSGLHKLLA-------DDIVFSMLKASA-AMGYLAPEYTTTGR--FTEKSDI 591
LS GL L+ +V K S + +L+PE + KSDI
Sbjct: 163 VDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 220
Query: 592 YAFGMIVFQILSGKCSITPFTRQAAESSKVE 622
Y+ G+ ++ +G PF A +E
Sbjct: 221 YSVGITACELANGH---VPFKDMPATQMLLE 248
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 45/191 (23%)
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH--RRYNP-----------LLSDSGLH 554
IS+++ IA G+++LH + ++H +L + +L+ R+ L+SD GL
Sbjct: 118 ISLLRQIASGVAHLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 555 KLL---ADDIVFSMLKASAAMGYLAPEY-------TTTGRFTEKSDIYAFGMIVFQILS- 603
K L ++ S G+ APE T R T DI++ G + + ILS
Sbjct: 176 KKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 604 GKCSITPFTRQAAESSKVEDFIDPNLEGKFSVSEASNLGQIAL---------HCTHESPS 654
GK PF + + S + + G FS+ E L +L P
Sbjct: 236 GK---HPFGDKYSRESNI-------IRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPL 285
Query: 655 HRPSIENVMQE 665
RP+ V++
Sbjct: 286 KRPTAMKVLRH 296
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 17/164 (10%)
Query: 448 KGLKILTSLKHENLASLRGI----CCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLE 503
+ L++L LKHEN+ L + + E +L+ + +L + +A S++ ++
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHVQ 134
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
+ ++ + +G+ Y+H G++H +L V ++ + D GL + AD+
Sbjct: 135 F-----LVYQLLRGLKYIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLAR-QADE--- 183
Query: 564 SMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGMIVFQILSGKC 606
M A Y APE + + DI++ G I+ ++L GK
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 448 KGLKILTSLKHENLASLRGICCSKGRGE----CFLIYDFVPNGNLLQHLDLEAGSEKVLE 503
+ L +L + H+N+ SL + + E +L+ + + + NL Q + +E E++
Sbjct: 70 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMS- 127
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
++ + GI +LH G++H +L +++ + D GL + + + F
Sbjct: 128 -----YLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN--F 178
Query: 564 SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSG 604
M Y APE + E DI++ G I+ +++ G
Sbjct: 179 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 86/183 (46%), Gaps = 14/183 (7%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCS---KGRGECFLIYDFVPN 485
VA++ I+ ++ L+ +KIL +HEN+ + I + + + +++ D +
Sbjct: 55 VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-E 113
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
+L + L + S + + + I +G+ Y+H ++H +L +L++ +
Sbjct: 114 TDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHSA--NVLHRDLKPSNLLLNTTCD 166
Query: 546 PLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVFQIL 602
+ D GL ++ D + + + A Y APE + +T+ DI++ G I+ ++L
Sbjct: 167 LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226
Query: 603 SGK 605
S +
Sbjct: 227 SNR 229
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VAVK + + E F + I+ +HEN+ + E +++ +F+
Sbjct: 176 GKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFLEG 232
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G L + +E+ + +V + + +S LH + G++H ++ ++ +L+
Sbjct: 233 GALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ--GVIHRDIKSDSILLTHDGR 285
Query: 546 PLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK 605
LSD G ++ ++ ++APE + + + DI++ G++V +++ G+
Sbjct: 286 VKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 344
Query: 606 CSITPFTRQAAESSK-VEDFIDPNLEGKFSVS 636
F ++ K + D + P L+ VS
Sbjct: 345 PPY--FNEPPLKAMKMIRDNLPPRLKNLHKVS 374
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Query: 429 VAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNL 488
VA+K I+ ++ L+ +KIL +HEN+ + I + + +Y L
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY-------L 123
Query: 489 LQHLDLEAGSEKVLEWATRIS------VIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHR 542
+ HL + A K+L+ +S + I +G+ Y+H ++H +L +L++
Sbjct: 124 VTHL-MGADLYKLLK-TQHLSNDHICYFLYQILRGLKYIHSA--NVLHRDLKPSNLLLNT 179
Query: 543 RYNPLLSDSGLHKLLADDIVFS--MLKASAAMGYLAPEYTTTGR-FTEKSDIYAFGMIVF 599
+ + D GL ++ D + + + A Y APE + +T+ DI++ G I+
Sbjct: 180 TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILA 239
Query: 600 QILSGK 605
++LS +
Sbjct: 240 EMLSNR 245
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 42 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLE 99
Query: 476 ----CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHP 531
+++ + + + NL Q + +E E++ ++ V GI +LH G++H
Sbjct: 100 EFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQMLV------GIKHLHSA--GIIHR 150
Query: 532 NLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDI 591
+L +++ + D GL + F M Y APE + E DI
Sbjct: 151 DLKPSNIVVKSDATLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 592 YAFGMIVFQILSGKCSITPFTRQAAESSKV 621
++ G+I+ +++ G + P T + +KV
Sbjct: 209 WSVGVIMGEMIKGGV-LFPGTDHIDQWNKV 237
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 83/193 (43%), Gaps = 18/193 (9%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 42 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLE 99
Query: 476 ----CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHP 531
+++ + + + NL Q + +E E++ ++ V GI +LH G++H
Sbjct: 100 EFQDVYIVMELM-DANLSQVIQMELDHERMSYLLYQMLV------GIKHLHSA--GIIHR 150
Query: 532 NLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDI 591
+L +++ + D GL + F M Y APE + E DI
Sbjct: 151 DLKPSNIVVKSDATLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDI 208
Query: 592 YAFGMIVFQILSG 604
++ G+I+ +++ G
Sbjct: 209 WSVGVIMGEMIKG 221
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 34/149 (22%)
Query: 477 FLIYDFVPNGNLLQHL-------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+L+++ + G++L H+ +LEA V++ +A + +LH K G+
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASV-----------VVQDVASALDFLHNK--GIA 133
Query: 530 HPNLSAEKVLIHR--RYNPL-LSDSGLH---KLLADDIVFS---MLKASAAMGYLAPEYT 580
H +L E +L + +P+ + D GL KL D S +L + Y+APE
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 581 TT-----GRFTEKSDIYAFGMIVFQILSG 604
+ ++ D+++ G+I++ +LSG
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 20/168 (11%)
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD----IVF 563
+ + IA+ + +LH K GL+H +L + + D GL + D V
Sbjct: 121 LHIFLQIAEAVEFLHSK--GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 564 SMLKASAAMG-------YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAA 616
+ + A A Y++PE ++ K DI++ G+I+F++L PF+ Q
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY------PFSTQME 232
Query: 617 ESSKVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664
+ D + F+ + SP RP N+++
Sbjct: 233 RVRTLTDVRNLKFPPLFTQKYPCEYVMVQ-DMLSPSPMERPEAINIIE 279
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 94/212 (44%), Gaps = 14/212 (6%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VAVK + + E F + I+ +HEN+ + E +++ +F+
Sbjct: 99 GKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFLEG 155
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G L + +E+ + +V + + +S LH + G++H ++ ++ +L+
Sbjct: 156 GALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ--GVIHRDIKSDSILLTHDGR 208
Query: 546 PLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK 605
LSD G ++ ++ ++APE + + + DI++ G++V +++ G+
Sbjct: 209 VKLSDFGFCAQVSKEVPRRKXLVGTPY-WMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 267
Query: 606 CSITPFTRQAAESSK-VEDFIDPNLEGKFSVS 636
F ++ K + D + P L+ VS
Sbjct: 268 PPY--FNEPPLKAMKMIRDNLPPRLKNLHKVS 297
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 508 ISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADD----IVF 563
+ + IA+ + +LH K GL+H +L + + D GL + D V
Sbjct: 167 LHIFIQIAEAVEFLHSK--GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
Query: 564 SMLKASAAMG-------YLAPEYTTTGRFTEKSDIYAFGMIVFQIL 602
+ + A A Y++PE ++ K DI++ G+I+F++L
Sbjct: 225 TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4ECN|A Chain A, Crystal Structure Of A Leucine-Rich Repeat Protein
(Bt_0210) From Bacteroides Thetaiotaomicron Vpi-5482 At
2.80 A Resolution
Length = 876
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 58 GVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGL 94
GV D NGRV +SL G G G +P A+G L L L
Sbjct: 316 GVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVL 352
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%)
Query: 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124
G + ++ L G + A GL SL L LH N + V P L L LYL NN
Sbjct: 152 GNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANN 211
Query: 125 LSGKIPSQIGNMTNLQVLQL 144
LS + + +LQ L+L
Sbjct: 212 LSMLPAEVLVPLRSLQYLRL 231
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 57/144 (39%), Gaps = 12/144 (8%)
Query: 46 PNADPCSSDSFDGVACDENGRVA----------NISLQGKGLSGEIPAAVGGLKSLTGLY 95
P A C ++ +C + G A I L G +S A+ ++LT L+
Sbjct: 2 PGACVCYNEPKVTTSCPQQGLQAVPTGIPASSQRIFLHGNRISYVPAASFQSCRNLTILW 61
Query: 96 LHFNALNGVIPKEIASLSELSDLYLNVN-NLSGKIPSQIGNMTNLQVLQLCYNKLTGNIP 154
LH NAL G+ L+ L L L+ N L P+ + +L L L L P
Sbjct: 62 LHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGP 121
Query: 155 TQLGSLRKLSVLALQYNQLTGAIP 178
L L L LQ N L A+P
Sbjct: 122 GLFRGLAALQYLYLQDNNLQ-ALP 144
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 1/115 (0%)
Query: 65 GRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNN 124
G + + L GL P GL +L LYL N L + L L+ L+L+ N
Sbjct: 104 GHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNR 163
Query: 125 LSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPA 179
+ + +L L L N + P L +L L L N L+ +PA
Sbjct: 164 IPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-MLPA 217
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%)
Query: 88 LKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYN 147
L +LT L+LH N + V L L L L+ N+++ P ++ L L L N
Sbjct: 151 LGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFAN 210
Query: 148 KLTGNIPTQLGSLRKLSVLALQYN 171
L+ L LR L L L N
Sbjct: 211 NLSMLPAEVLVPLRSLQYLRLNDN 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 16/178 (8%)
Query: 448 KGLKILTSLKHENLASLRGICCSKGRGE----CFLIYDFVPNGNLLQHLDLEAGSEKVLE 503
+ L +L + H+N+ SL + + E +L+ + + + NL Q + +E E++
Sbjct: 72 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMS- 129
Query: 504 WATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVF 563
++ + GI +LH G++H +L +++ + D GL + + F
Sbjct: 130 -----YLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN--F 180
Query: 564 SMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKV 621
M Y APE + DI++ G I+ +++ G C I T + +KV
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG-CVIFQGTDHIDQWNKV 237
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/134 (19%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLS 534
E +++ +++ G+L + +E ++ +V + + + +LH + ++H N+
Sbjct: 92 ELWVVMEYLAGGSLT-----DVVTETCMDEGQIAAVCRECLQALEFLHSNQ--VIHRNIK 144
Query: 535 AEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDI 591
++ +L+ + L+D G I K S +G ++APE T + K DI
Sbjct: 145 SDNILLGMDGSVKLTDFGF----CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 592 YAFGMIVFQILSGK 605
++ G++ +++ G+
Sbjct: 201 WSLGIMAIEMIEGE 214
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VAVK + + E F + I+ +HEN+ + E +++ +F+
Sbjct: 54 GKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFLEG 110
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G L + +E+ + +V + + +S LH + G++H ++ ++ +L+
Sbjct: 111 GALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ--GVIHRDIKSDSILLTHDGR 163
Query: 546 PLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQIL 602
LSD G ++ ++ + +G ++APE + + + DI++ G++V +++
Sbjct: 164 VKLSDFGFCAQVSKEVP----RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219
Query: 603 SGKCSITPFTRQAAESSK-VEDFIDPNLEGKFSVS 636
G+ F ++ K + D + P L+ VS
Sbjct: 220 DGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVS 252
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 16/194 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 42 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEE 100
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 101 FQDVYLVMELM-DANLXQVIQMELDHERM------SYLLYQMLCGIKHLHS--AGIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSGKC 606
+ G I+ +++ K
Sbjct: 210 SVGCIMGEMVRHKI 223
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIH-RRYNPLLSDSGLHKLLADDIVFSMLKASAAM 572
+ I + H + G+VH ++ E +LI RR L D G LL D+
Sbjct: 148 VVAAIQHCHSR--GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE---PYTDFDGTR 202
Query: 573 GYLAPEYTTTGRFTE-KSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLEG 631
Y PE+ + ++ + +++ G++++ ++ C PF R ++ ++ L
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMV---CGDIPFERD-------QEILEAELH- 251
Query: 632 KFSVSEASNLGQIALHCTHESPSHRPSIENVM 663
F + + + C PS RPS+E ++
Sbjct: 252 -FPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 432 KCIAKTSCKSDEGEFLK-----------GLKILTSLKHENLASLRGICCSKGRGECFLIY 480
+C+ +S K+ +F+K + IL +H N+ L + E +I+
Sbjct: 23 RCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHE--SFESMEELVMIF 80
Query: 481 DFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLI 540
+F+ ++ + ++ A L +S + + + + +LH G H ++ E ++
Sbjct: 81 EFISGLDIFERINTSAFE---LNEREIVSYVHQVCEALQFLHSHNIG--HFDIRPENIIY 135
Query: 541 HRRYNPLLS--DSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIV 598
R + + + G + L F +L A Y APE + +D+++ G +V
Sbjct: 136 QTRRSSTIKIIEFGQARQLKPGDNFRLL--FTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193
Query: 599 FQILSGKCSITPF 611
+ +LSG I PF
Sbjct: 194 YVLLSG---INPF 203
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VAVK + + E F + I+ +HEN+ + E +++ +F+
Sbjct: 56 GKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFLEG 112
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G L + +E+ + +V + + +S LH + G++H ++ ++ +L+
Sbjct: 113 GALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ--GVIHRDIKSDSILLTHDGR 165
Query: 546 PLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQIL 602
LSD G ++ ++ + +G ++APE + + + DI++ G++V +++
Sbjct: 166 VKLSDFGFCAQVSKEVP----RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221
Query: 603 SGKCSITPFTRQAAESSK-VEDFIDPNLEGKFSVS 636
G+ F ++ K + D + P L+ VS
Sbjct: 222 DGEPPY--FNEPPLKAMKMIRDNLPPRLKNLHKVS 254
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 108/243 (44%), Gaps = 24/243 (9%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G VAVK + + E F + I+ H+N+ + E +++ +F+
Sbjct: 70 GKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDMYSSYLVGD--ELWVVMEFLEG 126
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G L + +E+ + +V + + +SYLH + G++H ++ ++ +L+
Sbjct: 127 GALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQ--GVIHRDIKSDSILLTSDGR 179
Query: 546 PLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQIL 602
LSD G ++ ++ K +G ++APE + + + DI++ G++V +++
Sbjct: 180 IKLSDFGFCAQVSKEVP----KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 235
Query: 603 SGKCSITPFTRQAAESS--KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIE 660
G+ P+ + + ++ D + P ++ VS G + L E PS R + +
Sbjct: 236 DGE---PPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLR-GFLDLMLVRE-PSQRATAQ 290
Query: 661 NVM 663
++
Sbjct: 291 ELL 293
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 430 AVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLL 489
AVK I K+ K D E ++ L L +H N+ +L+ + G+ +++ + G LL
Sbjct: 51 AVKIIDKS--KRDPTEEIEIL--LRYGQHPNIITLKDVY-DDGK-YVYVVTELXKGGELL 104
Query: 490 QHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNP-- 546
+ +K +V+ I K + YLH + G+VH +L +L + NP
Sbjct: 105 DKI----LRQKFFSEREASAVLFTITKTVEYLHAQ--GVVHRDLKPSNILYVDESGNPES 158
Query: 547 -LLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK 605
+ D G K L + A ++APE + DI++ G++++ L+G
Sbjct: 159 IRICDFGFAKQLRAENGLLXTPCYTA-NFVAPEVLERQGYDAACDIWSLGVLLYTXLTG- 216
Query: 606 CSITPFTRQAAESSKVEDFIDPNLEGKFSVS 636
TPF ++ E+ + GKFS+S
Sbjct: 217 --YTPFANGPDDTP--EEILARIGSGKFSLS 243
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG 573
I K + YL K G++H ++ +L+ R L D G+ L DD +++
Sbjct: 133 IVKALYYLKEKH-GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD--RSAGCAA 189
Query: 574 YLAPEYT-----TTGRFTEKSDIYAFGMIVFQILSGK 605
Y+APE T + ++D+++ G+ + ++ +G+
Sbjct: 190 YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VAVK + + E F + I+ +HEN+ + E +++ +F+
Sbjct: 45 GKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFLEG 101
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G L + +E+ + +V + + +S LH + G++H ++ ++ +L+
Sbjct: 102 GALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ--GVIHRDIKSDSILLTHDGR 154
Query: 546 PLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQIL 602
LSD G ++ ++ + +G ++APE + + + DI++ G++V +++
Sbjct: 155 VKLSDFGFCAQVSKEVP----RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210
Query: 603 SGK 605
G+
Sbjct: 211 DGE 213
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/183 (19%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 426 GSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPN 485
G +VAVK + + E F + I+ +HEN+ + E +++ +F+
Sbjct: 49 GKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSYLVGD--ELWVVMEFLEG 105
Query: 486 GNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYN 545
G L + +E+ + +V + + +S LH + G++H ++ ++ +L+
Sbjct: 106 GALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ--GVIHRDIKSDSILLTHDGR 158
Query: 546 PLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQIL 602
LSD G ++ ++ + +G ++APE + + + DI++ G++V +++
Sbjct: 159 VKLSDFGFCAQVSKEVP----RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 214
Query: 603 SGK 605
G+
Sbjct: 215 DGE 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 42 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEE 100
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 101 FQDVYLVMELM-DANLCQVIQMELDHERM------SYLLYQMLCGIKHLHS--AGIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 210 SVGCIMGEMVRHK 222
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 424 RDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDF 482
R G VA+K +++ + + L +L ++HEN+ L + F YDF
Sbjct: 65 RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF--YDF 122
Query: 483 ---VP--NGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEK 537
+P +L + + +E EK+ ++ + KG+ Y+H G+VH +L
Sbjct: 123 YLVMPFMQTDLQKIMGMEFSEEKIQ------YLVYQMLKGLKYIHS--AGVVHRDLKPGN 174
Query: 538 VLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGM 596
+ ++ + D GL + AD M Y APE + + + DI++ G
Sbjct: 175 LAVNEDCELKILDFGLARH-ADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGC 230
Query: 597 IVFQILSGKC 606
I+ ++L+GK
Sbjct: 231 IMAEMLTGKT 240
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 16/192 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 44 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 101
Query: 476 CF---LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
F I + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 102 EFQDVYIVMELMDANLCQVIQMELDHERMS------YLLYQMLCGIKHLHSA--GIIHRD 153
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M+ Y APE + E DI+
Sbjct: 154 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMVPFVVTRYYRAPEVILGMGYKENVDIW 211
Query: 593 AFGMIVFQILSG 604
+ G I+ +++ G
Sbjct: 212 SVGCIMGEMIKG 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 35 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 93
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 94 FQDVYLVMELM-DANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 144
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 145 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 202
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 203 SVGCIMGEMVRHK 215
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 16/192 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 42 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLE 99
Query: 476 CF---LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
F I + + NL Q + +E E++ ++ V GI +LH G++H +
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV------GIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSG 604
+ G I+ +++ G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 36 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 94
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 95 FQDVYLVMELM-DANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 145
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 146 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 203
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 204 SVGCIMGEMVRHK 216
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 32/200 (16%)
Query: 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAE 536
FL+ + G L++ L + S L T + + + + ++H ++P ++H +L E
Sbjct: 109 FLLLTELCKGQLVEFLK-KMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVE 167
Query: 537 KVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAM-----------GYLAPEYT---TT 582
+L+ + L D G ++ +S A+ Y PE +
Sbjct: 168 NLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSN 227
Query: 583 GRFTEKSDIYAFGMIVF---------------QILSGKCSITPF-TRQAAESSKVEDFID 626
EK DI+A G I++ +I++GK SI P T+ S + +
Sbjct: 228 FPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQ 287
Query: 627 PNLEGKFSVSE-ASNLGQIA 645
N E + S++E L +IA
Sbjct: 288 VNPEERLSIAEVVHQLQEIA 307
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 80 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 139 FQDVYLVMELM-DANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 189
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 190 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 247
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 248 SVGCIMGEMVRHK 260
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 36 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 94
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 95 FQDVYLVMELM-DANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 145
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 146 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 203
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 204 SVGCIMGEMVRHK 216
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 82/186 (44%), Gaps = 10/186 (5%)
Query: 426 GSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGIC-CSKGRGECFLIYDFV 483
G VA+K I ++ L+ LKIL KH+N+ +++ I + GE +Y +
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 139
Query: 484 PNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR 543
H + + LE + + +G+ Y+H + ++H +L +L++
Sbjct: 140 DLMESDLHQIIHSSQPLTLEHVRYF--LYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNEN 195
Query: 544 YNPLLSDSGLHKLLAD---DIVFSMLKASAAMGYLAPEYT-TTGRFTEKSDIYAFGMIVF 599
+ D G+ + L + + M + A Y APE + +T+ D+++ G I
Sbjct: 196 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 255
Query: 600 QILSGK 605
++L+ +
Sbjct: 256 EMLARR 261
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 42 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 100
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 101 FQDVYLVMELM-DANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 210 SVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 43 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 101
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 102 FQDVYLVMELM-DANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 152
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 210
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 211 SVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 42 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 100
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 101 FQDVYLVMELM-DANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 210 SVGCIMGEMVRHK 222
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 41 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 99
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 100 FQDVYLVMELM-DANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 150
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 151 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 208
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 209 SVGCIMGEMVRHK 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 43 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 101
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 102 FQDVYLVMELM-DANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 152
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 210
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 211 SVGCIMGEMVRHK 223
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 16/192 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 42 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99
Query: 476 CF---LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
F I + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPEVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSG 604
+ G I+ +++ G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE- 475
A Y +L D +V K ++ + L ++ + H+N+ SL + + E
Sbjct: 80 AAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138
Query: 476 ---CFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
+L+ + + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 139 FQDVYLVMELM-DANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 189
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 190 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 247
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 248 SVGCIMGEMVRHK 260
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 74 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 122
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 123 YVPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 176
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 177 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 602 LSG 604
+G
Sbjct: 233 AAG 235
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 66 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 114
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 115 YVPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 168
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 169 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Query: 602 LSG 604
+G
Sbjct: 225 AAG 227
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 67 VANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLS 126
+ + L G ++ A++ GL +L L L FN+++ V +A+ L +L+LN N L
Sbjct: 194 LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253
Query: 127 GKIPSQIGNMTNLQVLQLCYNKLTG 151
K+P + + +QV+ L N ++
Sbjct: 254 -KVPGGLADHKYIQVVYLHNNNISA 277
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 10/155 (6%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSM---LKASA 570
I K + +LH K ++H ++ VLI+ + D G+ L DD+ + K
Sbjct: 118 IVKALEHLHSKL-SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYM 176
Query: 571 AMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVEDFIDPNLE 630
A + PE G ++ KSDI++ G+ + ++ + + + +V + P L
Sbjct: 177 APERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLP 235
Query: 631 G-KFSVSEASNLGQIALHCTHESPSHRPSIENVMQ 664
KFS Q C ++ RP+ +MQ
Sbjct: 236 ADKFSAEFVDFTSQ----CLKKNSKERPTYPELMQ 266
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 67 VANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLS 126
+ + L G ++ A++ GL +L L L FN+++ V +A+ L +L+LN N L
Sbjct: 194 LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253
Query: 127 GKIPSQIGNMTNLQVLQLCYNKLTG 151
K+P + + +QV+ L N ++
Sbjct: 254 -KVPGGLADHKYIQVVYLHNNNISA 277
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 35.4 bits (80), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 82/186 (44%), Gaps = 10/186 (5%)
Query: 426 GSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGIC-CSKGRGECFLIYDFV 483
G VA+K I ++ L+ LKIL KH+N+ +++ I + GE +Y +
Sbjct: 79 GQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138
Query: 484 PNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRR 543
H + + LE + + +G+ Y+H + ++H +L +L++
Sbjct: 139 DLMESDLHQIIHSSQPLTLEHVRYF--LYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNEN 194
Query: 544 YNPLLSDSGLHKLLAD---DIVFSMLKASAAMGYLAPEYT-TTGRFTEKSDIYAFGMIVF 599
+ D G+ + L + + M + A Y APE + +T+ D+++ G I
Sbjct: 195 CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG 254
Query: 600 QILSGK 605
++L+ +
Sbjct: 255 EMLARR 260
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/134 (18%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLS 534
E +++ +++ G+L + +E ++ +V + + + +LH + ++H ++
Sbjct: 91 ELWVVMEYLAGGSLT-----DVVTETCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIK 143
Query: 535 AEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDI 591
++ +L+ + L+D G I K S +G ++APE T + K DI
Sbjct: 144 SDNILLGMDGSVKLTDFGF----CAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 592 YAFGMIVFQILSGK 605
++ G++ +++ G+
Sbjct: 200 WSLGIMAIEMIEGE 213
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 22/235 (9%)
Query: 388 ESFMFNLEEVERATQCFSEANLLGKSSFS-ATYKGILRDGSVVAVKCIAKTSC--KSDEG 444
E + L+EV F ++G+ +FS + + G V A+K + K + +
Sbjct: 47 EPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVS 106
Query: 445 EFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEW 504
F + +L + + L + +L+ ++ G+LL L E++
Sbjct: 107 CFREERDVLVNGDRRWITQLH--FAFQDENYLYLVMEYYVGGDLLTLL--SKFGERIPAE 162
Query: 505 ATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSG-LHKLLADDIVF 563
R + + I I +H R G VH ++ + +L+ R + L+D G KL AD V
Sbjct: 163 MARFYLAE-IVMAIDSVH--RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR 219
Query: 564 SMLKASAAMGYLAPEY-------TTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
S++ A YL+PE TG + + D +A G+ +++ G+ TPF
Sbjct: 220 SLV-AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ---TPF 270
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 424 RDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYDF 482
R G VA+K +++ + + L +L ++HEN+ L + F YDF
Sbjct: 47 RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF--YDF 104
Query: 483 ---VP--NGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEK 537
+P +L + + L+ EK+ ++ + KG+ Y+H G+VH +L
Sbjct: 105 YLVMPFMQTDLQKIMGLKFSEEKIQ------YLVYQMLKGLKYIHS--AGVVHRDLKPGN 156
Query: 538 VLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTG-RFTEKSDIYAFGM 596
+ ++ + D GL + AD M Y APE + + + DI++ G
Sbjct: 157 LAVNEDCELKILDFGLARH-ADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGC 212
Query: 597 IVFQILSGKC 606
I+ ++L+GK
Sbjct: 213 IMAEMLTGKT 222
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 40/93 (43%)
Query: 81 IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ 140
+P L +LT L + FN L + + L EL +LYL N L P + L+
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L L N+LT L L L L LQ N L
Sbjct: 152 KLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/134 (18%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLS 534
E +++ +++ G+L + +E ++ +V + + + +LH + ++H ++
Sbjct: 91 ELWVVMEYLAGGSLT-----DVVTETCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIK 143
Query: 535 AEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDI 591
++ +L+ + L+D G I K S +G ++APE T + K DI
Sbjct: 144 SDNILLGMDGSVKLTDFGF----CAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 592 YAFGMIVFQILSGK 605
++ G++ +++ G+
Sbjct: 200 WSLGIMAIEMIEGE 213
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 40/93 (43%)
Query: 81 IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ 140
+P L +LT L + FN L + + L EL +LYL N L P + L+
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L L N+LT L L L L LQ N L
Sbjct: 152 KLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--YSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 16/192 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 42 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99
Query: 476 CF---LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
F I + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSG 604
+ G I+ +++ G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/134 (18%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLS 534
E +++ +++ G+L + +E ++ +V + + + +LH + ++H ++
Sbjct: 92 ELWVVMEYLAGGSLT-----DVVTETCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIK 144
Query: 535 AEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDI 591
++ +L+ + L+D G I K S +G ++APE T + K DI
Sbjct: 145 SDNILLGMDGSVKLTDFGF----CAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 592 YAFGMIVFQILSGK 605
++ G++ +++ G+
Sbjct: 201 WSLGIMAIEMIEGE 214
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 16/192 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 43 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 100
Query: 476 CF---LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
F I + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 101 EFQDVYIVMELMDANLCQVIQMELDHERMS------YLLYQMLCGIKHLHSA--GIIHRD 152
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 210
Query: 593 AFGMIVFQILSG 604
+ G I+ +++ G
Sbjct: 211 SVGCIMGEMIKG 222
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 36/150 (24%)
Query: 477 FLIYDFVPNGNLLQHL-------DLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLV 529
+L+++ + G++L H+ +LEA V++ +A + +LH K G+
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASV-----------VVQDVASALDFLHNK--GIA 133
Query: 530 HPNLSAEKVLIHR--RYNPL-LSD----SGLHKLLADDIVFS---MLKASAAMGYLAPEY 579
H +L E +L + +P+ + D SG+ KL D S +L + Y+APE
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGI-KLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 580 TTT-----GRFTEKSDIYAFGMIVFQILSG 604
+ ++ D+++ G+I++ +LSG
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/134 (18%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 475 ECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLS 534
E +++ +++ G+L + +E ++ +V + + + +LH + ++H ++
Sbjct: 91 ELWVVMEYLAGGSLT-----DVVTETCMDEGQIAAVCRECLQALEFLHSNQ--VIHRDIK 143
Query: 535 AEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTTGRFTEKSDI 591
++ +L+ + L+D G I K S +G ++APE T + K DI
Sbjct: 144 SDNILLGMDGSVKLTDFGF----CAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 592 YAFGMIVFQILSGK 605
++ G++ +++ G+
Sbjct: 200 WSLGIMAIEMIEGE 213
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--YSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 16/192 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 42 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99
Query: 476 CF---LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
F I + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSG 604
+ G I+ +++ G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 66 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 114
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 115 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 168
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 169 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 224
Query: 602 LSG 604
+G
Sbjct: 225 AAG 227
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 74 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 122
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 123 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 176
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 177 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 602 LSG 604
+G
Sbjct: 233 AAG 235
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--YSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 74 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 122
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 123 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 176
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 177 QQGYIQVTDFGFAKRVKG----RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 602 LSG 604
+G
Sbjct: 233 AAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 74 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 122
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 123 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 176
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 177 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 602 LSG 604
+G
Sbjct: 233 AAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 74 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 122
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 123 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 176
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 177 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 602 LSG 604
+G
Sbjct: 233 AAG 235
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 94 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 142
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 143 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 196
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 197 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 602 LSG 604
+G
Sbjct: 253 AAG 255
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 16/192 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 42 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99
Query: 476 CF---LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
F I + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSG 604
+ G I+ +++ G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 59 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 107
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 108 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 161
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 162 QQGYIQVTDFGFAKRVKG----RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 217
Query: 602 LSG 604
+G
Sbjct: 218 AAG 220
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 74 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 122
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 123 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 176
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 177 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 602 LSG 604
+G
Sbjct: 233 AAG 235
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 39/93 (41%)
Query: 81 IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ 140
+P L +LT L + FN L + + L EL +LYL N L P + L+
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L L N LT L L L L LQ N L
Sbjct: 152 KLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+VP G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 39/93 (41%)
Query: 81 IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ 140
+P L +LT L + FN L + + L EL +LYL N L P + L+
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L L N LT L L L L LQ N L
Sbjct: 152 KLSLANNDLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 16/192 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 42 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLE 99
Query: 476 CF---LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
F I + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDATLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSG 604
+ G I+ +++ G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 39/93 (41%)
Query: 81 IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ 140
+P L +LT L + FN L + + L EL +LYL N L P + L+
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L L N LT L L L L LQ N L
Sbjct: 152 KLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 80/192 (41%), Gaps = 16/192 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 42 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99
Query: 476 CF---LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
F I + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 100 EFQDVYIVMELMDANLSQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSG 604
+ G I+ +++ G
Sbjct: 210 SVGCIMGEMIKG 221
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 40/93 (43%)
Query: 81 IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ 140
+P L +LT L + FN L + + L EL +LYL N L P + L+
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L L N+LT L L L L LQ N L
Sbjct: 152 KLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 40/93 (43%)
Query: 81 IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ 140
+P L +LT L + FN L + + L EL +LYL N L P + L+
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L L N+LT L L L L LQ N L
Sbjct: 152 KLSLANNQLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 39/93 (41%)
Query: 81 IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ 140
+P L +LT L + FN L + + L EL +LYL N L P + L+
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L L N LT L L L L LQ N L
Sbjct: 152 KLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 39/93 (41%)
Query: 81 IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ 140
+P L +LT L + FN L + + L EL +LYL N L P + L+
Sbjct: 93 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 152
Query: 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L L N LT L L L L LQ N L
Sbjct: 153 KLSLANNNLTELPAGLLNGLENLDTLLLQENSL 185
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 39/93 (41%)
Query: 81 IPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQ 140
+P L +LT L + FN L + + L EL +LYL N L P + L+
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 141 VLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L L N LT L L L L LQ N L
Sbjct: 152 KLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
++P G++ HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YMPGGDMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 450 LKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQ-HLDLEAGSEKVLEWATRI 508
+ I SL H+++ G + F++ + +LL+ H +A +E + R
Sbjct: 68 ISIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 125
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKA 568
V+ G YLH R ++H +L + ++ + D GL A + + +
Sbjct: 126 IVL-----GCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERK 174
Query: 569 SAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK------CSITPFTRQAAESS 619
G Y+APE + + + D+++ G I++ +L GK C + R
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ I+P A++L Q L P+ RP+I ++ +
Sbjct: 235 SIPKHINPV---------AASLIQKMLQT---DPTARPTINELLND 268
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 450 LKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQ-HLDLEAGSEKVLEWATRI 508
+ I SL H+++ G + F++ + +LL+ H +A +E + R
Sbjct: 68 ISIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 125
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKA 568
V+ G YLH R ++H +L + ++ + D GL A + + +
Sbjct: 126 IVL-----GCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERK 174
Query: 569 SAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK------CSITPFTRQAAESS 619
G Y+APE + + + D+++ G I++ +L GK C + R
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ I+P A++L Q L P+ RP+I ++ +
Sbjct: 235 SIPKHINPV---------AASLIQKMLQT---DPTARPTINELLND 268
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
++P G++ HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YMPGGDMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 450 LKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQ-HLDLEAGSEKVLEWATRI 508
+ I SL H+++ G + F++ + +LL+ H +A +E + R
Sbjct: 92 ISIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 149
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKA 568
V+ G YLH R ++H +L + ++ + D GL A + + +
Sbjct: 150 IVL-----GCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERK 198
Query: 569 SAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK------CSITPFTRQAAESS 619
G Y+APE + + + D+++ G I++ +L GK C + R
Sbjct: 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 258
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ I+P A++L Q L P+ RP+I ++ +
Sbjct: 259 SIPKHINPV---------AASLIQKMLQT---DPTARPTINELLND 292
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 450 LKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQ-HLDLEAGSEKVLEWATRI 508
+ I SL H+++ G + F++ + +LL+ H +A +E + R
Sbjct: 72 ISIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 129
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKA 568
V+ G YLH R ++H +L + ++ + D GL A + + +
Sbjct: 130 IVL-----GCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERK 178
Query: 569 SAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK------CSITPFTRQAAESS 619
G Y+APE + + + D+++ G I++ +L GK C + R
Sbjct: 179 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 238
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ I+P A++L Q L P+ RP+I ++ +
Sbjct: 239 SIPKHINPV---------AASLIQKMLQT---DPTARPTINELLND 272
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 35/226 (15%)
Query: 450 LKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQ-HLDLEAGSEKVLEWATRI 508
+ I SL H+++ G + F++ + +LL+ H +A +E + R
Sbjct: 90 ISIHRSLAHQHVVGFHGFF--EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 147
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKA 568
V+ G YLH R ++H +L + ++ + D GL A + + +
Sbjct: 148 IVL-----GCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERK 196
Query: 569 SAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK------CSITPFTRQAAESS 619
G Y+APE + + + D+++ G I++ +L GK C + R
Sbjct: 197 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 256
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ I+P A++L Q L P+ RP+I ++ +
Sbjct: 257 SIPKHINPV---------AASLIQKMLQT---DPTARPTINELLND 290
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 90/226 (39%), Gaps = 35/226 (15%)
Query: 450 LKILTSLKHENLASLRGICCSKGRGECFLIYDFVPNGNLLQ-HLDLEAGSEKVLEWATRI 508
+ I SL H+++ G + F++ + +LL+ H +A +E + R
Sbjct: 66 ISIHRSLAHQHVVGFHGF--FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR- 122
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKA 568
I G YLH R ++H +L + ++ + D GL A + + +
Sbjct: 123 ----QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGL----ATKVEYDGERK 172
Query: 569 SAAMG---YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGK------CSITPFTRQAAESS 619
G Y+APE + + + D+++ G I++ +L GK C + R
Sbjct: 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 232
Query: 620 KVEDFIDPNLEGKFSVSEASNLGQIALHCTHESPSHRPSIENVMQE 665
+ I+P A++L Q L P+ RP+I ++ +
Sbjct: 233 SIPKHINPV---------AASLIQKMLQT---DPTARPTINELLND 266
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 530 HPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKS 589
H ++ E +L+ L D G+ D+ + + + Y APE + T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 590 DIYAFGMIVFQILSG 604
DIYA ++++ L+G
Sbjct: 217 DIYALTCVLYECLTG 231
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
++K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 119 EIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 174
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
+ Y+APE ++ + D+++ G+I++ +L C PF
Sbjct: 175 TEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL---CGYPPF 217
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKEIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ P G + HL + E R + I YLH L++ +L E ++I
Sbjct: 122 YAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLMID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D GL K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 417 ATYKGILRDGSVVAVKCIAKT-SCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGE 475
A Y IL VA+K +++ ++ + L ++ + H+N+ L + + E
Sbjct: 42 AAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99
Query: 476 CF---LIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPN 532
F I + + NL Q + +E E++ ++ + GI +LH G++H +
Sbjct: 100 EFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQMLCGIKHLHSA--GIIHRD 151
Query: 533 LSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIY 592
L +++ + D GL + F M Y APE + E DI+
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTS--FMMEPEVVTRYYRAPEVILGMGYKENVDIW 209
Query: 593 AFGMIVFQILSGK 605
+ G I+ +++ K
Sbjct: 210 SVGCIMGEMVCHK 222
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++Q+
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKEIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ P G + HL + E R + I YLH L++ +L E ++I
Sbjct: 122 YAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLMID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D GL K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIKVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ P G + HL + E R + I YLH L++ +L E ++I
Sbjct: 122 YAPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLMID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 21/148 (14%)
Query: 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAE 536
+L+ D+ G+LL L +++ E R + + + I +H + VH ++ +
Sbjct: 150 YLVMDYYVGGDLLTLL--SKFEDRLPEEMARFYLAEMVI-AIDSVH--QLHYVHRDIKPD 204
Query: 537 KVLIHRRYNPLLSDSG-LHKLLADDIVFSMLKASAAMG---YLAPEYTTT-----GRFTE 587
+L+ + L+D G KL+ D V ++S A+G Y++PE GR+
Sbjct: 205 NILMDMNGHIRLADFGSCLKLMEDGTV----QSSVAVGTPDYISPEILQAMEGGKGRYGP 260
Query: 588 KSDIYAFGMIVFQILSGKCSITPFTRQA 615
+ D ++ G+ ++++L G+ TPF ++
Sbjct: 261 ECDWWSLGVCMYEMLYGE---TPFYAES 285
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 74 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLTKLE--FSFKDNSNLYMVME 122
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ P G + HL + E R + I YLH L++ +L E ++I
Sbjct: 123 YAPGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLMID 176
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 177 QQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 602 LSG 604
+G
Sbjct: 233 AAG 235
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
++K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 127 EIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 182
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE ++ + D+++ G+I++ +L C PF
Sbjct: 183 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL---CGYPPF 225
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
++K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 165 EIMKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 220
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE ++ + D+++ G+I++ +L C PF
Sbjct: 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL---CGYPPF 263
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
++K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 126 EIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 181
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE ++ + D+++ G+I++ +L C PF
Sbjct: 182 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL---CGYPPF 224
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
++K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 119 EIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 174
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE ++ + D+++ G+I++ +L C PF
Sbjct: 175 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL---CGYPPF 217
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
++K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 125 EIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 180
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE ++ + D+++ G+I++ +L C PF
Sbjct: 181 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL---CGYPPF 223
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ P G + HL + E R + I YLH L++ +L E ++I
Sbjct: 122 YAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLMID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
++K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 120 EIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 175
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE ++ + D+++ G+I++ +L C PF
Sbjct: 176 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL---CGYPPF 218
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 46/189 (24%)
Query: 62 DENGRVANI---SLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDL 118
D+ R++++ ++ GL E+P L L L N L +P IASL+ L +L
Sbjct: 98 DQAFRLSHLQHXTIDAAGLX-ELPDTXQQFAGLETLTLARNPLRA-LPASIASLNRLREL 155
Query: 119 YLNVNNLSGKIPSQIGN---------MTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQ 169
+ ++P + + + NLQ L+L + + ++P + +L+ L L ++
Sbjct: 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIR 214
Query: 170 YNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNSFSGNVPP-- 227
+ L+ PA + ++PKLE LD+R + N PP
Sbjct: 215 NSPLSALGPA-------------------------IHHLPKLEELDLRGCTALRNYPPIF 249
Query: 228 ----ALKRL 232
LKRL
Sbjct: 250 GGRAPLKRL 258
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
++K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 121 EIMKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 176
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE ++ + D+++ G+I++ +L C PF
Sbjct: 177 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL---CGYPPF 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
++K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 171 EIMKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 226
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE ++ + D+++ G+I++ +L C PF
Sbjct: 227 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL---CGYPPF 269
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
++K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 135 EIMKSIGEAIQYLHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 190
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE ++ + D+++ G+I++ +L C PF
Sbjct: 191 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL---CGYPPF 233
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
++K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 121 EIMKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 176
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE ++ + D+++ G+I++ +L C PF
Sbjct: 177 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL---CGYPPF 219
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 94 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 142
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 143 YVAGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 196
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 197 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 602 LSG 604
+G
Sbjct: 253 AAG 255
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 48 ADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPK 107
D S D V + R+ S+ G V L +LT + N L + P
Sbjct: 36 TDTVSQTDLDQVTTLQADRLGIKSIDG----------VEYLNNLTQINFSNNQLTDITP- 84
Query: 108 EIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLA 167
+ +L++L D+ +N N ++ P + N+TNL L L N++T P L +L L+ L
Sbjct: 85 -LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 139
Query: 168 LQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222
L N I F N + LAN+ LE LDI +N S
Sbjct: 140 LSSN----TISDISALSGLTSLQQLSFGNQVTDLK-PLANLTTLERLDISSNKVS 189
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 85 VGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144
+G L +L L L+ N L + +ASL+ L+DL L N +S P + +T L L+L
Sbjct: 216 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 271
Query: 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVK 204
N+++ P L L L+ L L NQL P FNN+ PV
Sbjct: 272 GANQISNISP--LAGLTALTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV- 326
Query: 205 LANVPKLEVLDIRNNSFS 222
+++ KL+ L NN S
Sbjct: 327 -SSLTKLQRLFFANNKVS 343
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 48 ADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPK 107
D S D V + R+ S+ G V L +LT + N L + P
Sbjct: 37 TDTVSQTDLDQVTTLQADRLGIKSIDG----------VEYLNNLTQINFSNNQLTDITP- 85
Query: 108 EIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLA 167
+ +L++L D+ +N N ++ P + N+TNL L L N++T P L +L L+ L
Sbjct: 86 -LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 140
Query: 168 LQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222
L N I F N + LAN+ LE LDI +N S
Sbjct: 141 LSSN----TISDISALSGLTSLQQLSFGNQVTDLK-PLANLTTLERLDISSNKVS 190
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 85 VGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144
+G L +L L L+ N L + +ASL+ L+DL L N +S P + +T L L+L
Sbjct: 217 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 272
Query: 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVK 204
N+++ P L L L+ L L NQL P FNN+ PV
Sbjct: 273 GANQISNISP--LAGLTALTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV- 327
Query: 205 LANVPKLEVLDIRNNSFS 222
+++ KL+ L NN S
Sbjct: 328 -SSLTKLQRLFFYNNKVS 344
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ P G + HL + E R + I YLH L++ +L E ++I
Sbjct: 122 YAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLMID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 68 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 116
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 117 YVAGGEMFSHLRRIG---RFXEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 170
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 171 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 226
Query: 602 LSG 604
+G
Sbjct: 227 AAG 229
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 74 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 122
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ P G + HL + E R + I YLH L++ +L E ++I
Sbjct: 123 YAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLMID 176
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 177 QQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 602 LSG 604
+G
Sbjct: 233 AAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 74 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLTKLE--FSFKDNSNLYMVME 122
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ P G + HL + E R + I YLH L++ +L E ++I
Sbjct: 123 YAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLMID 176
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 177 QQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 602 LSG 604
+G
Sbjct: 233 AAG 235
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 32.3 bits (72), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 94 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 142
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 143 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 196
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + + YLAPE + + + D +A G++++++
Sbjct: 197 QQGYIQVTDFGFAKRVKG----ATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 252
Query: 602 LSG 604
+G
Sbjct: 253 AAG 255
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 83 AAVGGLKSLTGLYLHFNAL----NGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTN 138
+A+ L +LT L L N L NGV K L+ L +L L N L +TN
Sbjct: 79 SALKELTNLTYLILTGNQLQSLPNGVFDK----LTNLKELVLVENQLQSLPDGVFDKLTN 134
Query: 139 LQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
L L L +N+L L L+ L L YNQL
Sbjct: 135 LTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 48 ADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPK 107
D S D V + R+ S+ G V L +LT + N L + P
Sbjct: 32 TDTVSQTDLDQVTTLQADRLGIKSIDG----------VEYLNNLTQINFSNNQLTDITP- 80
Query: 108 EIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLA 167
+ +L++L D+ +N N ++ P + N+TNL L L N++T P L +L L+ L
Sbjct: 81 -LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 135
Query: 168 LQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222
L N I F N + LAN+ LE LDI +N S
Sbjct: 136 LSSN----TISDISALSGLTSLQQLNFGNQVTDLK-PLANLTTLERLDISSNKVS 185
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 85 VGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144
+G L +L L L+ N L + +ASL+ L+DL L N +S P + +T L L+L
Sbjct: 212 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 267
Query: 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVK 204
N+++ P L L L+ L L NQL P FNN+ PV
Sbjct: 268 GANQISNISP--LAGLTALTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV- 322
Query: 205 LANVPKLEVLDIRNNSFS 222
+++ KL+ L NN S
Sbjct: 323 -SSLTKLQRLFFYNNKVS 339
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 48 ADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPK 107
D S D V + R+ S+ G V L +LT + N L + P
Sbjct: 32 TDTVSQTDLDQVTTLQADRLGIKSIDG----------VEYLNNLTQINFSNNQLTDITP- 80
Query: 108 EIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLA 167
+ +L++L D+ +N N ++ P + N+TNL L L N++T P L +L L+ L
Sbjct: 81 -LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 135
Query: 168 LQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222
L N I F N + LAN+ LE LDI +N S
Sbjct: 136 LSSN----TISDISALSGLTSLQQLNFGNQVTDLK-PLANLTTLERLDISSNKVS 185
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 85 VGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144
+G L +L L L+ N L + +ASL+ L+DL L N +S P + +T L L+L
Sbjct: 212 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 267
Query: 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVK 204
N+++ P L L L+ L L NQL P FNN+ PV
Sbjct: 268 GANQISNISP--LAGLTALTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV- 322
Query: 205 LANVPKLEVLDIRNNSFS 222
+++ KL+ L NN S
Sbjct: 323 -SSLTKLQRLFFSNNKVS 339
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 74 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLTKLE--FSFKDNSNLYMVME 122
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+ P G + HL + E R + I YLH L++ +L E ++I
Sbjct: 123 YAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLMID 176
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 177 QQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 602 LSG 604
+G
Sbjct: 233 AAG 235
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFAEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG 573
I G+ +LH + +++ +L E VL+ N +SD GL L + A G
Sbjct: 298 IVSGLEHLHQR--NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-G 354
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVED 623
++APE + D +A G+ ++++++ + PF A KVE+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFR---ARGEKVEN 398
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG 573
I G+ +LH + +++ +L E VL+ N +SD GL L + A G
Sbjct: 298 IVSGLEHLHQR--NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-G 354
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVED 623
++APE + D +A G+ ++++++ + PF A KVE+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFR---ARGEKVEN 398
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG 573
I G+ +LH + +++ +L E VL+ N +SD GL L + A G
Sbjct: 298 IVSGLEHLHQR--NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-G 354
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVED 623
++APE + D +A G+ ++++++ + PF A KVE+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFR---ARGEKVEN 398
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 514 IAKGISYLHGKRPGLVHPNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG 573
I G+ +LH + +++ +L E VL+ N +SD GL L + A G
Sbjct: 298 IVSGLEHLHQR--NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTP-G 354
Query: 574 YLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPFTRQAAESSKVED 623
++APE + D +A G+ ++++++ + PF A KVE+
Sbjct: 355 FMAPELLLGEEYDFSVDYFALGVTLYEMIAAR---GPFR---ARGEKVEN 398
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 20/175 (11%)
Query: 48 ADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPK 107
D S D V + R+ S+ G V L +LT + N L + P
Sbjct: 32 TDTVSQTDLDQVTTLQADRLGIKSIDG----------VEYLNNLTQINFSNNQLTDITP- 80
Query: 108 EIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLA 167
+ +L++L D+ +N N ++ P + N+TNL L L N++T P L +L L+ L
Sbjct: 81 -LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 135
Query: 168 LQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222
L N ++ + N + P LAN+ LE LDI +N S
Sbjct: 136 LSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVS 186
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 85 VGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144
+G L +L L L+ N L + +ASL+ L+DL L N +S P + +T L L+L
Sbjct: 213 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 268
Query: 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVK 204
N+++ P L L L+ L L NQL P FNN+ PV
Sbjct: 269 GANQISNISP--LAGLTALTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV- 323
Query: 205 LANVPKLEVLDIRNNSFS 222
+++ KL+ L NN S
Sbjct: 324 -SSLTKLQRLFFSNNKVS 340
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 74 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 122
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 123 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 176
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 177 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 232
Query: 602 LSG 604
+G
Sbjct: 233 AAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 56/134 (41%), Gaps = 10/134 (7%)
Query: 471 KGRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVH 530
K +++ ++ P G + HL + E R + I YLH L++
Sbjct: 112 KDNSNLYMVLEYAPGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIY 165
Query: 531 PNLSAEKVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSD 590
+L E +LI ++ ++D G K + YLAPE + + + D
Sbjct: 166 RDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 591 IYAFGMIVFQILSG 604
+A G++++++ +G
Sbjct: 222 WWALGVLIYEMAAG 235
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 20/175 (11%)
Query: 48 ADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPK 107
D S D V + R+ S+ G V L +LT + N L + P
Sbjct: 32 TDTVSQTDLDQVTTLQADRLGIKSIDG----------VEYLNNLTQINFSNNQLTDITP- 80
Query: 108 EIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLA 167
+ +L++L D+ +N N ++ P + N+TNL L L N++T P L +L L+ L
Sbjct: 81 -LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 135
Query: 168 LQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222
L N ++ + N + P LAN+ LE LDI +N S
Sbjct: 136 LSSNTISDI--SALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVS 186
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 85 VGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144
+G L +L L L+ N L + +ASL+ L+DL L N +S P + +T L L+L
Sbjct: 213 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 268
Query: 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVK 204
N+++ P L L L+ L L NQL P FNN+ PV
Sbjct: 269 GANQISNISP--LAGLTALTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV- 323
Query: 205 LANVPKLEVLDIRNNSFS 222
+++ KL+ L NN S
Sbjct: 324 -SSLTKLQRLFFYNNKVS 340
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 122 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 105 IPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLS 164
+P I + +++ LY +N ++ P ++T L L L N+LT L KL+
Sbjct: 34 VPAGIPTTTQVLHLY--INQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLT 91
Query: 165 VLALQYNQLTGAIPAXXXXXXXXXXXXXXFNN 196
LAL NQL +IP FNN
Sbjct: 92 HLALHINQL-KSIPMGVFDNLKSLTHIYLFNN 122
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 20/175 (11%)
Query: 48 ADPCSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPK 107
D S D V + R+ S+ G V L +LT + N L + P
Sbjct: 32 TDTVSQTDLDQVTTLQADRLGIKSIDG----------VEYLNNLTQINFSNNQLTDITP- 80
Query: 108 EIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLA 167
+ +L++L D+ +N N ++ P + N+TNL L L N++T P L +L L+ L
Sbjct: 81 -LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 135
Query: 168 LQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVKLANVPKLEVLDIRNNSFS 222
L N ++ + N + P LAN+ LE LDI +N S
Sbjct: 136 LSSNTISDI--SALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVS 186
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 85 VGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQL 144
+G L +L L L+ N L + +ASL+ L+DL L N +S P + +T L L+L
Sbjct: 213 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 268
Query: 145 CYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPAXXXXXXXXXXXXXXFNNLFGPVPVK 204
N+++ P L L L+ L L NQL P FNN+ PV
Sbjct: 269 GANQISNISP--LAGLTALTNLELNENQLEDISPI--SNLKNLTYLTLYFNNISDISPV- 323
Query: 205 LANVPKLEVLDIRNNSFS 222
+++ KL+ L NN S
Sbjct: 324 -SSLTKLQRLFFYNNKVS 340
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 6/112 (5%)
Query: 70 ISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKE--IASLSELSDLYLNVNNLSG 127
+ G+GL EIP + T L L+ N L G I + L L L L N L+G
Sbjct: 13 VDCTGRGLK-EIPRDIP--LHTTELLLNDNEL-GRISSDGLFGRLPHLVKLELKRNQLTG 68
Query: 128 KIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQLTGAIPA 179
P+ +++Q LQL NK+ L +L L L NQ++ +P
Sbjct: 69 IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPG 120
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 73 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 121
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E ++I
Sbjct: 122 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLIID 175
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
++ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 176 QQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEM 231
Query: 602 LSG 604
+G
Sbjct: 232 AAG 234
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 19/147 (12%)
Query: 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAE 536
+L+ D+ G+LL L +K+ E R I + I +H + VH ++ +
Sbjct: 166 YLVMDYYVGGDLLTLL--SKFEDKLPEDMARF-YIGEMVLAIDSIH--QLHYVHRDIKPD 220
Query: 537 KVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTT-----GRFTEK 588
VL+ + L+D G + DD +++S A+G Y++PE G++ +
Sbjct: 221 NVLLDVNGHIRLADFGSCLKMNDD---GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPE 277
Query: 589 SDIYAFGMIVFQILSGKCSITPFTRQA 615
D ++ G+ ++++L G+ TPF ++
Sbjct: 278 CDWWSLGVCMYEMLYGE---TPFYAES 301
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 70/147 (47%), Gaps = 19/147 (12%)
Query: 477 FLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAE 536
+L+ D+ G+LL L +K+ E R I + I +H + VH ++ +
Sbjct: 150 YLVMDYYVGGDLLTLL--SKFEDKLPEDMARF-YIGEMVLAIDSIH--QLHYVHRDIKPD 204
Query: 537 KVLIHRRYNPLLSDSGLHKLLADDIVFSMLKASAAMG---YLAPEYTTT-----GRFTEK 588
VL+ + L+D G + DD +++S A+G Y++PE G++ +
Sbjct: 205 NVLLDVNGHIRLADFGSCLKMNDD---GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPE 261
Query: 589 SDIYAFGMIVFQILSGKCSITPFTRQA 615
D ++ G+ ++++L G+ TPF ++
Sbjct: 262 CDWWSLGVCMYEMLYGE---TPFYAES 285
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 21/183 (11%)
Query: 422 ILRDGSVVAVKCIAKTSCKSDEGEFLKGLKILTSLKHENLASLRGICCSKGRGECFLIYD 481
IL VV +K I T L +IL ++ L L K +++ +
Sbjct: 60 ILDKQKVVKLKQIEHT---------LNEKRILQAVNFPFLVKLE--FSFKDNSNLYMVME 108
Query: 482 FVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHPNLSAEKVLIH 541
+V G + HL + E R + I YLH L++ +L E +LI
Sbjct: 109 YVAGGEMFSHLRRIG---RFSEPHARFYAAQ-IVLTFEYLHS--LDLIYRDLKPENLLID 162
Query: 542 RRYNPLLSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQI 601
+ ++D G K + YLAPE + + + D +A G++++++
Sbjct: 163 EQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 218
Query: 602 LSG 604
+G
Sbjct: 219 AAG 221
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Query: 51 CSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA 110
C ++ + A ++N+ L G + P + GL SL L L + I
Sbjct: 66 CEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIG 125
Query: 111 SLSELSDLYLNVNNL-SGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRK 162
L L L + N + S K+P+ N+TNL + L YN + L LR+
Sbjct: 126 QLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRE 178
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Query: 51 CSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA 110
C ++ + A ++N+ L G + P + GL SL L L + I
Sbjct: 61 CEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIG 120
Query: 111 SLSELSDLYLNVNNL-SGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRK 162
L L L + N + S K+P+ N+TNL + L YN + L LR+
Sbjct: 121 QLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRE 173
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 509 SVIKGIAKGISYLHGKRPGLVHPNLSAEKVL-IHRRYNPLL--SDSGLHKLLADDIVFSM 565
+ K I + I YLH + H ++ E +L +R N +L +D G K S+
Sbjct: 165 EIXKSIGEAIQYLHS--INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH--NSL 220
Query: 566 LKASAAMGYLAPEYTTTGRFTEKSDIYAFGMIVFQILSGKCSITPF 611
Y+APE ++ + D ++ G+I + +L C PF
Sbjct: 221 TTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILL---CGYPPF 263
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 64 NGRVANISLQGKGLSGEIPAAVGGLK--SLTGLYLHFNALNGVIPKEIASLSELSDLYLN 121
N + N+SL L + GLK +LT L L +N L+ V + L L L L
Sbjct: 221 NTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLE 280
Query: 122 VNNLSGKIPSQIGNMTNLQVLQL 144
NN+ P ++NL+ L L
Sbjct: 281 YNNIQRLSPRSFYGLSNLRYLSL 303
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 62 DENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNAL----NGVIPKEIASLSELSD 117
D+ ++ +SL + L LT LYLH N L NGV K L++L +
Sbjct: 49 DKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDK----LTQLKE 104
Query: 118 LYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIP 154
L L+ N L +T+LQ + L N + P
Sbjct: 105 LALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 70 ISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKI 129
I KGL+ +P + S T L L N L + L++L+ L L+ N +
Sbjct: 12 IRCNSKGLTS-VPTGIPS--SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLP 68
Query: 130 PSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKLSVLALQYNQL 173
+T L +L L NKL L +L LAL NQL
Sbjct: 69 DGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQL 112
>pdb|2A4H|A Chain A, Solution Structure Of Sep15 From Drosophila Melanogaster
Length = 126
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 360 PLISLEYSNGWDPLAKGQSGNGFSQEVLESFMFNLEEVERATQCFSEANLLGKSSFS 416
P + ++Y G DP+ K +G QE L +N + VE + + GK+S+S
Sbjct: 51 PNLQIKYVRGLDPVVKLLDASGKVQETLSITKWNTDTVEEFFETHLAKDGAGKNSYS 107
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 472 GRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHP 531
G+ +I + + G L + E G + E +++ I I +LH + H
Sbjct: 97 GKRCLLIIMECMEGGELFSRIQ-ERGDQAFTE-REAAEIMRDIGTAIQFLHSH--NIAHR 152
Query: 532 NLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEK 588
++ E +L + L+D G K + ++ Y+APE ++ +
Sbjct: 153 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKS 209
Query: 589 SDIYAFGMIVFQILSGKCSITPF 611
D+++ G+I++ +L C PF
Sbjct: 210 CDMWSLGVIMYILL---CGFPPF 229
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 472 GRGECFLIYDFVPNGNLLQHLDLEAGSEKVLEWATRISVIKGIAKGISYLHGKRPGLVHP 531
G+ +I + + G L + E G + E +++ I I +LH + H
Sbjct: 78 GKRCLLIIMECMEGGELFSRIQ-ERGDQAFTE-REAAEIMRDIGTAIQFLHSH--NIAHR 133
Query: 532 NLSAEKVLIHRRYNPL---LSDSGLHKLLADDIVFSMLKASAAMGYLAPEYTTTGRFTEK 588
++ E +L + L+D G K + ++ Y+APE ++ +
Sbjct: 134 DVKPENLLYTSKEKDAVLKLTDFGFAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKS 190
Query: 589 SDIYAFGMIVFQILSGKCSITPF 611
D+++ G+I++ +L C PF
Sbjct: 191 CDMWSLGVIMYILL---CGFPPF 210
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 84 AVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQ 143
AV L L L + N ++ + + +LS+L+ L+LN N L + IG +TNL L
Sbjct: 260 AVKDLTKLKXLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLF 317
Query: 144 LCYNKLTGNIPTQLGSLRK 162
L N +T P L SL K
Sbjct: 318 LSQNHITDIRP--LASLSK 334
>pdb|4G1T|A Chain A, Crystal Structure Of Interferon-Stimulated Gene 54
pdb|4G1T|B Chain B, Crystal Structure Of Interferon-Stimulated Gene 54
Length = 472
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 21/71 (29%)
Query: 341 SDSRLSTDQVKEVCRRNSSPLI----SLEYSNGWDPLAKGQSGNGFSQEVLESFMFNLEE 396
SD ++ D+VK VC + SSP L+ GW L G + N
Sbjct: 111 SDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQN---------------- 154
Query: 397 VERATQCFSEA 407
ERA CF +A
Sbjct: 155 -ERAKVCFEKA 164
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Query: 51 CSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA 110
C + + A ++ + L G + A GL SL L L + I
Sbjct: 64 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIG 123
Query: 111 SLSELSDLYLNVNNL-SGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKL 163
L L +L + N + S K+P N+TNL+ L L NK+ T L L ++
Sbjct: 124 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 177
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Query: 51 CSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA 110
C + + A ++ + L G + A GL SL L L + I
Sbjct: 63 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIG 122
Query: 111 SLSELSDLYLNVNNL-SGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKL 163
L L +L + N + S K+P N+TNL+ L L NK+ T L L ++
Sbjct: 123 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 176
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Query: 51 CSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA 110
C + + A ++ + L G + A GL SL L L + I
Sbjct: 64 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVALETNLASLENFPIG 123
Query: 111 SLSELSDLYLNVNNL-SGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKL 163
L L +L + N + S K+P N+TNL+ L L NK+ T L L ++
Sbjct: 124 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 177
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Query: 51 CSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA 110
C + + A ++ + L G + A GL SL L L + I
Sbjct: 63 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIG 122
Query: 111 SLSELSDLYLNVNNL-SGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKL 163
L L +L + N + S K+P N+TNL+ L L NK+ T L L ++
Sbjct: 123 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 176
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 1/114 (0%)
Query: 51 CSSDSFDGVACDENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIA 110
C + + A ++ + L G + A GL SL L L + I
Sbjct: 62 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIG 121
Query: 111 SLSELSDLYLNVNNL-SGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQLGSLRKL 163
L L +L + N + S K+P N+TNL+ L L NK+ T L L ++
Sbjct: 122 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 175
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 36/88 (40%)
Query: 62 DENGRVANISLQGKGLSGEIPAAVGGLKSLTGLYLHFNALNGVIPKEIASLSELSDLYLN 121
DE + + L G L L SLT L L N L + L++L +L LN
Sbjct: 49 DELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108
Query: 122 VNNLSGKIPSQIGNMTNLQVLQLCYNKL 149
N L +T L+ L+L N+L
Sbjct: 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQL 136
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 118 LYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIPTQL-GSLRKLSVLALQYNQL 173
L+LN N ++ P ++ NLQ L NKLT IPT + L +L+ L L N L
Sbjct: 38 LWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHL 93
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 108 EIASLSELSDLYLNVNNLSGKIPSQIGNMTNLQVLQLCYNKLTGNIP----TQLGSLRKL 163
E AS L +L LN N +S P N+ NL+ L L N+L IP T L +L KL
Sbjct: 51 EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL-IPLGVFTGLSNLTKL 109
Query: 164 SV 165
+
Sbjct: 110 DI 111
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,080,559
Number of Sequences: 62578
Number of extensions: 792595
Number of successful extensions: 3231
Number of sequences better than 100.0: 810
Number of HSP's better than 100.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 488
Number of HSP's that attempted gapping in prelim test: 2075
Number of HSP's gapped (non-prelim): 940
length of query: 673
length of database: 14,973,337
effective HSP length: 105
effective length of query: 568
effective length of database: 8,402,647
effective search space: 4772703496
effective search space used: 4772703496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)